Citrus Sinensis ID: 019199

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340----
Protein Sequence
MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK
Secondary Structure (PSIPRED)
cccccccccEEEEEEEccccccccEEEEccccccccEEEEEEEEEccHHHHHHHcccccccccccccccEEEEEEEEEcccccccccccEEEEEEEEccccccHHHccccccccccccccccccccccccccccccccEEEcccEEEEccccccccccccccccccccccccccccccccccEEEEEEcccHHHHHHHHHHHcccEEEEEEccccHHHHHHHHccccEEEEcccHHHHHHHHccccEEEEcccccccHHHHHHccccccEEEEEcccccccccccccccccHHHHHHHHHHHHHcccccEEEEEccccHHHHHHHHHcccccEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
ccccccEEEEEEEEEEccccccEEEEEEccccccccEEEEEEEEEEEcccHHEEccccccccccEEcccEEEEEEEEEcccccccccccEEEEEEEcccccccHHccccccccccccEEEEcccccccccccccccEEEEEcccEEEEccccccHHHHHHHHcHHHHHHHHHHHcccccccEEEEEccccHHHHHHHHHHHHccccEEEEEEccHHHHHHHHHHccccEEccccHHHHHHHcccccEEEEEcccHHHHHHHHHHHccccEEEEEEccccccccccccEEcccccHHHHHHHHHHccccEEEEEEcHHHHHHHHHHHHccccEEEEEEEcccccc
Coil and Loop (DISEMBL)
mtsetaskdclgwaardpsgvlspysfnrravgsddvsiTITHCGVCYADVIwtrnkhgdskyplvpghEIVGIVKEVghnvsrfkvgdhvgvgtyvnscrdceycndglevhcarsvytfnaidadgtitkggysSYIVVHERYCYKiandyplalAAPLLcagitvytpmmrhkmnqpgkslgviglggLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLgadkfvvsSDLEQMKALGKSLDFIIdtasgdhpfDAYMSLLKVAGVYVLVgfpskvkfspaslniggtkdTQEMLEYCAAhkiypqietipieNVNEALERLIKRDVKYRFVIDIQNSLK
Flexible Loop (DISEMBL)
mtsetaskdclgwaardpsgvlspYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFnaidadgtitkggYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPskvkfspaslniggTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERlikrdvkyrfVIDIQNSLK
Low Complexity Region (SEG)
MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYplalaapllcaGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK
Disordered region (IsUnstruct)
*********CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR***************************AFGLNVTVL**********LSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI*****
Disordered Region (DISOPRED)
******S***LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL*
Disordered Region (DISEMBL)
********DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK
Disordered Region (DISPRO)
****TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQN***
Transmembrane Helix (TMHMM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	344	2.2.26 [Sep-21-2011]
Q9CAI3	355	Probable cinnamyl alcohol	yes	no	0.997	0.966	0.753	1e-155
Q8H859	354	Probable cinnamyl alcohol	yes	no	1.0	0.971	0.700	1e-142
Q2R114	354	Putative cinnamyl alcohol	no	no	1.0	0.971	0.694	1e-141
Q337Y2	366	Probable cinnamyl alcohol	no	no	0.976	0.918	0.544	1e-98
Q40976	357	Probable cinnamyl alcohol	N/A	no	0.994	0.957	0.473	1e-96
O82035	357	Probable cinnamyl alcohol	N/A	no	0.994	0.957	0.470	1e-96
Q08350	357	Probable cinnamyl alcohol	N/A	no	0.994	0.957	0.467	4e-96
O82515	359	Probable mannitol dehydro	N/A	no	0.965	0.924	0.540	8e-92
Q9SJ10	375	Cinnamyl alcohol dehydrog	no	no	0.968	0.888	0.515	5e-91
Q43137	354	Probable mannitol dehydro	N/A	no	0.979	0.951	0.518	9e-91

>sp|Q9CAI3|CADH1_ARATH Probable cinnamyl alcohol dehydrogenase 1 OS=Arabidopsis thaliana GN=CAD1 PE=2 SV=1

 Score =  549 bits (1414), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 266/353 (75%), Positives = 309/353 (87%), Gaps = 10/353 (2%)

Query: 2   TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS 61
           +SE+   +C+ WAARDPSG+LSP++  RR+V +DDVS+TITHCGVCYADVIW+RN+HGDS
Sbjct: 3   SSESVENECMCWAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDS 62

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
           KYPLVPGHEI GIV +VG NV RFKVGDHVGVGTYVNSCR+CEYCN+G EV+CA+ V+TF
Sbjct: 63  KYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTF 122

Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG 181
           N ID DG++TKGGYSS+IVVHERYCYKI  DYPL  AAPLLCAGITVY PMMRH MNQPG
Sbjct: 123 NGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPG 182

Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL 241
           KSLGVIGLGGLGHMAVKFGKAFGL+VTV STS SKKEEAL+LLGA+ FV+SSD +QMKAL
Sbjct: 183 KSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKAL 242

Query: 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI----------GG 291
            KSLDF++DTASGDH FD YMSLLK+AG YVLVGFPS++K SPA+LN+          GG
Sbjct: 243 EKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSEIKISPANLNLGMRMLAGSVTGG 302

Query: 292 TKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           TK TQ+ML++CAAHKIYP IE IPI+ +NEALER++K+D+KYRFVIDI+NSLK
Sbjct: 303 TKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSLK 355

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.
Arabidopsis thaliana (taxid: 3702)
EC: 1EC: .EC: 1EC: .EC: 1EC: .EC: 1EC: 9EC: 5

>sp|Q8H859|CADH1_ORYSJ Probable cinnamyl alcohol dehydrogenase 1 OS=Oryza sativa subsp. japonica GN=CAD1 PE=2 SV=1

 Score =  504 bits (1297), Expect = e-142,   Method: Compositional matrix adjust.
 Identities = 248/354 (70%), Positives = 289/354 (81%), Gaps = 10/354 (2%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M +E  S +C  WAARDPSG+LSPY FNRRAV SDDVS+ ITHCGVCYADV WTRN   +
Sbjct: 1   MAAECGSGNCDAWAARDPSGILSPYKFNRRAVQSDDVSLRITHCGVCYADVAWTRNILNN 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YPLVPGHEI G+V EVG +V  FKVGDHVGVGTYVNSCRDCE CN  LE +C++ V+T
Sbjct: 61  SMYPLVPGHEIAGVVTEVGADVKSFKVGDHVGVGTYVNSCRDCENCNSSLENYCSQHVFT 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           FN +D DGT+TKGGYS++IVVHERYC+KI + YPL  AAPLLCAGITVY+PMMRH MNQP
Sbjct: 121 FNGVDTDGTVTKGGYSTHIVVHERYCFKIPDGYPLEKAAPLLCAGITVYSPMMRHNMNQP 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GKSLGVIGLGGLGHMAVKFGKAFGL VTV+STS SK++EA+ LLGAD FVVSSD  QM+ 
Sbjct: 181 GKSLGVIGLGGLGHMAVKFGKAFGLKVTVISTSESKRKEAIDLLGADNFVVSSDENQMET 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI----------G 290
           L  SL+FIIDTASGDHPFD Y++LLKV GV  L+ FPS++K  PA+LN+          G
Sbjct: 241 LKSSLNFIIDTASGDHPFDPYLTLLKVGGVMALLSFPSEIKVHPANLNLGGRSLSGSVTG 300

Query: 291 GTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GTKD QEM+ +CAA+KIYP IE I I+ +NEAL+RL+ RDV++RFVIDI+NS K
Sbjct: 301 GTKDIQEMINFCAANKIYPDIEMIKIDYINEALQRLVDRDVRFRFVIDIENSFK 354

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q2R114|CADH4_ORYSJ Putative cinnamyl alcohol dehydrogenase 4 OS=Oryza sativa subsp. japonica GN=CAD4 PE=3 SV=2

 Score =  499 bits (1286), Expect = e-141,   Method: Compositional matrix adjust.
 Identities = 246/354 (69%), Positives = 288/354 (81%), Gaps = 10/354 (2%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M +E  S +C  WAARDPSG+LSPY FNRR V S+DVS+ ITHCGVCYADVIWTRN   D
Sbjct: 1   MAAECGSGNCDAWAARDPSGILSPYKFNRREVQSEDVSLRITHCGVCYADVIWTRNMFND 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YPLVPGHEI G+V EVG +V  FKVGDHVGVG YVNSC+DCE CN  LE HC++ V T
Sbjct: 61  SIYPLVPGHEIAGVVTEVGADVKGFKVGDHVGVGVYVNSCQDCENCNSSLENHCSKCVVT 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           +N++D+DGT+TKGGYSS+I+VH+RYC+KI  DYPL+ AAPLLCAGITVYTPM+RH MNQP
Sbjct: 121 YNSVDSDGTVTKGGYSSHILVHQRYCFKIPADYPLSKAAPLLCAGITVYTPMIRHNMNQP 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GKSLGVIGLGGLGHMAVKFGKAFGL VTV STS SK+EEA++LLGAD FV+SSD  QM++
Sbjct: 181 GKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSESKREEAINLLGADNFVISSDENQMES 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI----------G 290
           L  SL FIIDTASGDH FD Y+SLLKV GV VL+ FPS++K  P +LN+          G
Sbjct: 241 LKSSLHFIIDTASGDHQFDPYLSLLKVGGVMVLLSFPSEIKVHPENLNLAARSLAGSVTG 300

Query: 291 GTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GTKD QEM+ +CAA+ +YP IE I I+ VNEAL+RLI RDV++RFVIDI+NS K
Sbjct: 301 GTKDIQEMINFCAANNVYPDIEMIKIDYVNEALQRLINRDVRFRFVIDIENSFK 354

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q337Y2|CADH3_ORYSJ Probable cinnamyl alcohol dehydrogenase 3 OS=Oryza sativa subsp. japonica GN=CAD3 PE=2 SV=1

 Score =  360 bits (923), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 189/347 (54%), Positives = 241/347 (69%), Gaps = 11/347 (3%)

Query: 8   KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
           +  +G AARD SG LSP++ +RR+ G DDV+I I  CG+C++D+   +N+   S YPLVP
Sbjct: 14  QQAVGLAARDSSGHLSPFAISRRSTGDDDVAIKILFCGICHSDLHCIKNEWKHSIYPLVP 73

Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD 127
           GHEI G+V EVG NV+RFK GD VGVG  VNSCR CE CN+G E HC   V+T+N++D D
Sbjct: 74  GHEIAGVVTEVGKNVTRFKAGDRVGVGCMVNSCRSCESCNNGFENHCPEGVFTYNSVDKD 133

Query: 128 GTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI 187
           GT+T GGYSS +VVHER+        PL + APLLCAGITVYTPM  H +N PGK +GV+
Sbjct: 134 GTVTYGGYSSMVVVHERFVVMFPEAMPLDVGAPLLCAGITVYTPMKYHGLNAPGKHVGVL 193

Query: 188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247
           GLGGLGH+AVKF +AFGL VTV+S+S  KK EAL  LGAD FVVSS  E+M+A   ++D 
Sbjct: 194 GLGGLGHVAVKFARAFGLKVTVISSSPGKKREALERLGADAFVVSSSAEEMEAARSTMDG 253

Query: 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASL----------NIGGTKDTQ 296
           +I+T S + P   Y++LLK  G  +LVG P + ++  P SL          NIGG  DTQ
Sbjct: 254 VINTVSANTPMAPYLALLKPNGKMILVGLPENPLEVPPFSLVHGNRTLAGSNIGGMADTQ 313

Query: 297 EMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           EM+E  A H +   IE I  ++VN A+ERL K DV+YRFVID+ N+L
Sbjct: 314 EMIELAAKHGVTADIEVIGADDVNTAMERLAKADVRYRFVIDVGNTL 360

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Oryza sativa subsp. japonica (taxid: 39947)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q40976|CADH_PINRA Probable cinnamyl alcohol dehydrogenase OS=Pinus radiata GN=CAD PE=2 SV=1

 Score =  353 bits (905), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 167/353 (47%), Positives = 239/353 (67%), Gaps = 11/353 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M S    K   G+AARD SG LSPY++N R  G +DV + + +CG+C++D++  RN+ G 
Sbjct: 1   MGSLETEKTVTGYAARDSSGHLSPYTYNLRKKGPEDVIVKVIYCGICHSDLVQMRNEMGM 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YP+VPGHE+VGIV E+G  V +FKVG+HVGVG  V SCR C  CN  +E +C++ ++T
Sbjct: 61  SHYPMVPGHEVVGIVTEIGSEVKKFKVGEHVGVGCIVGSCRSCGNCNQSMEQYCSKRIWT 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           +N ++ DGT T+GG++S +VV + +  +I  + PL  AAPLLCAG+TV++PM    M +P
Sbjct: 121 YNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVFSPMKHFAMTEP 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GK  G++GLGG+GHM VK  KAFGL+VTV+S+S  KKEEA+ +LGAD ++VS D E+M  
Sbjct: 181 GKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEAMEVLGADAYLVSKDTEKMME 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKF----------SPASLNI 289
             +SLD+I+DT    HP + Y++LLK  G  V++G  P  + F          S A   I
Sbjct: 241 AAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFI 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
           G  ++TQE L++CA  K+   IE + ++ +N A+ERL K DV+YRFV+D+  S
Sbjct: 301 GSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLEKNDVRYRFVVDVAGS 353

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Pinus radiata (taxid: 3347)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|O82035|CADH2_PICAB Probable cinnamyl alcohol dehydrogenase 2 OS=Picea abies GN=CAD2 PE=3 SV=1

 Score =  353 bits (905), Expect = 1e-96,   Method: Compositional matrix adjust.
 Identities = 166/353 (47%), Positives = 240/353 (67%), Gaps = 11/353 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M S  + K   G+AARD SG LSPY++  R  G +DV + + +CG+C++D++   N+ G 
Sbjct: 1   MGSLESEKTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGM 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YP+VPGHE+VG+V E+G  V +FKVG+HVGVG  V SCR C  CN  +E +C++ ++T
Sbjct: 61  SNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWT 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           +N ++ DGT T+GG++S +VV + +  +I  + PL  AAPLLCAG+TVY+PM    M +P
Sbjct: 121 YNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEP 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GK  G++GLGG+GHM VK  KAFGL+VTV+S+S  KKEEAL +LGAD ++VS D E+M+ 
Sbjct: 181 GKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQE 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKF----------SPASLNI 289
             +SLD+I+DT    HP + Y++LLK  G  V++G  P  + F          S A   I
Sbjct: 241 AAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFI 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
           G  ++TQE L++CA  K+   IE + ++ +N A+ERL+K DV+YRFV+D+  S
Sbjct: 301 GSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVARS 353

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Picea abies (taxid: 3329)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q08350|CADH7_PICAB Probable cinnamyl alcohol dehydrogenase 7/8 OS=Picea abies GN=CAD7 PE=2 SV=1

 Score =  351 bits (901), Expect = 4e-96,   Method: Compositional matrix adjust.
 Identities = 165/353 (46%), Positives = 240/353 (67%), Gaps = 11/353 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M S  + +   G+AARD SG LSPY++  R  G +DV + + +CG+C++D++   N+ G 
Sbjct: 1   MGSLESERTVTGYAARDSSGHLSPYTYTLRNKGPEDVIVRVIYCGICHSDLVQMHNEMGM 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YP+VPGHE+VG+V E+G  V +FKVG+HVGVG  V SCR C  CN  +E +C++ ++T
Sbjct: 61  SNYPMVPGHEVVGVVTEIGSEVKKFKVGEHVGVGCIVGSCRSCSNCNGSMEQYCSKRIWT 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           +N ++ DGT T+GG++S +VV + +  +I  + PL  AAPLLCAG+TVY+PM    M +P
Sbjct: 121 YNDVNHDGTPTQGGFASSMVVDQMFVVRIPENLPLEQAAPLLCAGVTVYSPMKHFGMTEP 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GK  G++GLGG+GHM VK  KAFGL+VTV+S+S  KKEEAL +LGAD ++VS D E+M+ 
Sbjct: 181 GKKCGILGLGGVGHMGVKIAKAFGLHVTVISSSDKKKEEALEVLGADAYLVSKDAEKMQE 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKF----------SPASLNI 289
             +SLD+I+DT    HP + Y++LLK  G  V++G  P  + F          S A   I
Sbjct: 241 AAESLDYIMDTIPVAHPLEPYLALLKTNGKLVMLGVVPEPLHFVTPLLILGRRSIAGSFI 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
           G  ++TQE L++CA  K+   IE + ++ +N A+ERL+K DV+YRFV+D+  S
Sbjct: 301 GSMEETQETLDFCAEKKVSSMIEVVGLDYINTAMERLVKNDVRYRFVVDVAAS 353

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers, like coniferyl alcohol, sinapyl alcohol and 4-coumaryl alcohol.

Picea abies (taxid: 3329)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|O82515|MTDH_MEDSA Probable mannitol dehydrogenase OS=Medicago sativa GN=CAD1 PE=1 SV=1

 Score =  337 bits (864), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 186/344 (54%), Positives = 238/344 (69%), Gaps = 12/344 (3%)

Query: 11  LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
            GWAARD SG LSP+ F+RR  G DDVS+ I +CGVC++D+   +N  G + YP+VPGHE
Sbjct: 14  FGWAARDTSGTLSPFHFSRRENGDDDVSVKILYCGVCHSDLHTLKNDWGFTTYPVVPGHE 73

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
           IVG+V +VG NV +F+VGD+VGVG  V SC+ CE CN  LE +C + V+T+N+    GT 
Sbjct: 74  IVGVVTKVGINVKKFRVGDNVGVGVIVESCQTCENCNQDLEQYCPKPVFTYNS-PYKGTR 132

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLG 190
           T GGYS ++VVH+RY  +  ++ PL   APLLCAGITVY+PM  + M +PGK LGV GLG
Sbjct: 133 TYGGYSDFVVVHQRYVVQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLG 192

Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250
           GLGH+A+KFGKAFGL VTV+STS +K+ EA+  LGAD F+VS D E+MKA   ++D+IID
Sbjct: 193 GLGHVAIKFGKAFGLKVTVISTSPNKETEAIDKLGADSFLVSKDPEKMKAAMGTMDYIID 252

Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSK-VKFSPASL----------NIGGTKDTQEML 299
           T S  H     + LLK+ G  V VG PSK ++ S   L          NIGG K+TQEML
Sbjct: 253 TISAAHSLMPLLGLLKLNGKLVTVGLPSKPLELSVFPLVAGRKLIGGSNIGGMKETQEML 312

Query: 300 EYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           ++C  H I   IE I +  +N A+ERL K DVKYRFVID+ NS 
Sbjct: 313 DFCGKHNITADIELIKMHEINTAMERLHKADVKYRFVIDVANSF 356

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Medicago sativa (taxid: 3879)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

>sp|Q9SJ10|CADH3_ARATH Cinnamyl alcohol dehydrogenase 3 OS=Arabidopsis thaliana GN=CAD3 PE=1 SV=1

 Score =  334 bits (857), Expect = 5e-91,   Method: Compositional matrix adjust.
 Identities = 178/345 (51%), Positives = 233/345 (67%), Gaps = 12/345 (3%)

Query: 11  LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
            GWAA D SGVLSP+ F+RR  G +DV++ I  CGVC++D+   +N  G S+YP++PGHE
Sbjct: 8   FGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHE 67

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
           IVGI  +VG NV++FK GD VGVG  + SC+ CE CN  LE +C + V+T+N+  +DGT 
Sbjct: 68  IVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR 127

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN-QPGKSLGVIGL 189
            +GGYS  IVV  R+   I +  P    APLLCAGITVY+PM  + M  + GK LGV GL
Sbjct: 128 NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL 187

Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           GGLGH+AVK GKAFGL VTV+S S+ K+ EA+  LGAD F+V++D ++MK    ++DFII
Sbjct: 188 GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFII 247

Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGF---PSKVKFSPASL--------NIGGTKDTQEM 298
           DT S +H      SLLKV+G  V +G    P  +   P  L         IGG K+TQEM
Sbjct: 248 DTVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEM 307

Query: 299 LEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           LE+CA HKI   IE I + ++N A++RL+K DV+YRFVID+ NSL
Sbjct: 308 LEFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352

Involved in lignin biosynthesis. Catalyzes the final step specific for the production of lignin monomers. Catalyzes the NADPH-dependent reduction of coniferaldehyde, 5-hydroxyconiferaldehyde, sinapaldehyde, 4-coumaraldehyde and caffeyl aldehyde to their respective alcohols.

Arabidopsis thaliana (taxid: 3702)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: 9

EC: 5

>sp|Q43137|MTDH1_STYHU Probable mannitol dehydrogenase 1 OS=Stylosanthes humilis GN=CAD1 PE=2 SV=1

 Score =  333 bits (855), Expect = 9e-91,   Method: Compositional matrix adjust.
 Identities = 181/349 (51%), Positives = 240/349 (68%), Gaps = 12/349 (3%)

Query: 6   ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL 65
           AS    GWAA+D SG LSP+ F RR   +DDV++ I +CGVC++D+   +N  G + YP+
Sbjct: 2   ASSKAFGWAAKDASGHLSPFHFTRRQNEADDVTLKILYCGVCHSDLHTVKNDWGFTTYPV 61

Query: 66  VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID 125
           VPGHEI GIV +VG NV++FK GD VGVG  V+SC++CE C   LE +C + V+T+N+  
Sbjct: 62  VPGHEIAGIVTKVGSNVTKFKEGDRVGVGVIVDSCQECECCQQDLESYCPKPVFTYNS-P 120

Query: 126 ADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLG 185
             GT T+GGYS ++VVH+R+  +  ++ PL   APLLCAGITVY+PM  + M +PGK LG
Sbjct: 121 YKGTRTQGGYSDFVVVHQRFVLQFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLG 180

Query: 186 VIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
           V GLGGLGH+A+KFGKAFGL VTV+S+S +K+ EA+ +LGAD F++SSD E+MKA   ++
Sbjct: 181 VAGLGGLGHVAIKFGKAFGLKVTVISSSPNKESEAIDVLGADSFLLSSDPEKMKAATGTM 240

Query: 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP-----------ASLNIGGTKD 294
           D+IIDT S  H   + + LLK+ G  V VG PSK    P              N GG K+
Sbjct: 241 DYIIDTISAVHSLVSLLGLLKLNGKLVTVGLPSKPLQLPIFPLVAGRKLIGGSNFGGLKE 300

Query: 295 TQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           TQEML++C  H I   IE I ++ +N A+ERL K DVKYRFVID+ NSL
Sbjct: 301 TQEMLDFCGKHNIAANIELIKMDEINTAIERLSKADVKYRFVIDVANSL 349

Oxidizes mannitol to mannose. Provides the initial step by which translocated mannitol is committed to central metabolism and, by regulating mannitol pool size, is important in regulating salt tolerance at the cellular level.

Stylosanthes humilis (taxid: 35628)

EC: 1

EC: .

EC: 1

EC: .

EC: 1

EC: .

EC: 2

EC: 5

EC: 5

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
225426492	371	PREDICTED: probable cinnamyl alcohol deh	1.0	0.927	0.808	1e-161
297742485	355	unnamed protein product [Vitis vinifera]	1.0	0.969	0.808	1e-161
255555851	358	alcohol dehydrogenase, putative [Ricinus	0.997	0.958	0.774	1e-156
297842013	355	hypothetical protein ARALYDRAFT_895120 [	0.994	0.963	0.767	1e-155
356554814	357	PREDICTED: probable cinnamyl alcohol deh	1.0	0.963	0.780	1e-154
356549501	357	PREDICTED: probable cinnamyl alcohol deh	1.0	0.963	0.777	1e-154
15218564	355	putative cinnamyl alcohol dehydrogenase	0.997	0.966	0.753	1e-154
268528129	355	cinnamyl alcohol dehydrogenase 5 [Gossyp	1.0	0.969	0.780	1e-154
192912952	355	cinnamyl alcohol dehydrogenase [Elaeis g	1.0	0.969	0.752	1e-150
357446025	406	Cinnamyl alcohol dehydrogenase [Medicago	1.0	0.847	0.746	1e-149

>gi|225426492|ref|XP_002277375.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Vitis vinifera]

 Score =  572 bits (1475), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 287/355 (80%), Positives = 317/355 (89%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           MTSE+A  +CL WAARDPSG+LSPY F+RRA+GSDDVS+ ITHCGVCYADV+WTRNK GD
Sbjct: 17  MTSESADDNCLAWAARDPSGLLSPYKFSRRALGSDDVSLNITHCGVCYADVVWTRNKFGD 76

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           SKYP+VPGHEI GIVKEVG NV RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR SV+
Sbjct: 77  SKYPVVPGHEIAGIVKEVGSNVRRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARGSVF 136

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN +D DGT+TKGGYSS+IVVHERYC+KI ++YPLA AAPLLCAGITVYTPMMRHKMNQ
Sbjct: 137 TFNGVDVDGTVTKGGYSSHIVVHERYCFKIPDNYPLASAAPLLCAGITVYTPMMRHKMNQ 196

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGVIGLGGLGH+AVKFGKAFGL VTVLSTS SKKEEAL+LLGADKFVVSSD +QM 
Sbjct: 197 PGKSLGVIGLGGLGHLAVKFGKAFGLRVTVLSTSISKKEEALNLLGADKFVVSSDEQQMM 256

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           AL +SLDFIIDTASGDHPFD Y+SLLK AGV VLVGFPS+VKFSP S+ +          
Sbjct: 257 ALSRSLDFIIDTASGDHPFDPYLSLLKTAGVLVLVGFPSEVKFSPGSIVMGMRTVSGSAT 316

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTKDTQEML++CAAH I+P+IE IPI+  NEALERLIK+DVKYRFVIDI+NSLK
Sbjct: 317 GGTKDTQEMLDFCAAHGIHPEIEVIPIQYANEALERLIKKDVKYRFVIDIENSLK 371

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297742485|emb|CBI34634.3| unnamed protein product [Vitis vinifera]

 Score =  572 bits (1474), Expect = e-161,   Method: Compositional matrix adjust.
 Identities = 287/355 (80%), Positives = 317/355 (89%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           MTSE+A  +CL WAARDPSG+LSPY F+RRA+GSDDVS+ ITHCGVCYADV+WTRNK GD
Sbjct: 1   MTSESADDNCLAWAARDPSGLLSPYKFSRRALGSDDVSLNITHCGVCYADVVWTRNKFGD 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           SKYP+VPGHEI GIVKEVG NV RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR SV+
Sbjct: 61  SKYPVVPGHEIAGIVKEVGSNVRRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARGSVF 120

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN +D DGT+TKGGYSS+IVVHERYC+KI ++YPLA AAPLLCAGITVYTPMMRHKMNQ
Sbjct: 121 TFNGVDVDGTVTKGGYSSHIVVHERYCFKIPDNYPLASAAPLLCAGITVYTPMMRHKMNQ 180

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGVIGLGGLGH+AVKFGKAFGL VTVLSTS SKKEEAL+LLGADKFVVSSD +QM 
Sbjct: 181 PGKSLGVIGLGGLGHLAVKFGKAFGLRVTVLSTSISKKEEALNLLGADKFVVSSDEQQMM 240

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           AL +SLDFIIDTASGDHPFD Y+SLLK AGV VLVGFPS+VKFSP S+ +          
Sbjct: 241 ALSRSLDFIIDTASGDHPFDPYLSLLKTAGVLVLVGFPSEVKFSPGSIVMGMRTVSGSAT 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTKDTQEML++CAAH I+P+IE IPI+  NEALERLIK+DVKYRFVIDI+NSLK
Sbjct: 301 GGTKDTQEMLDFCAAHGIHPEIEVIPIQYANEALERLIKKDVKYRFVIDIENSLK 355

Source: Vitis vinifera

Species: Vitis vinifera

Genus: Vitis

Family: Vitaceae

Order: Vitales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|255555851|ref|XP_002518961.1| alcohol dehydrogenase, putative [Ricinus communis] gi|223541948|gb|EEF43494.1| alcohol dehydrogenase, putative [Ricinus communis]

 Score =  556 bits (1433), Expect = e-156,   Method: Compositional matrix adjust.
 Identities = 274/354 (77%), Positives = 307/354 (86%), Gaps = 11/354 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M+S++  +DCL WAARDPSGVLSPY F+RRAVG DD+S+ ITHCG+CYAD IWTRNKHGD
Sbjct: 1   MSSQSVKEDCLAWAARDPSGVLSPYKFSRRAVGEDDISLKITHCGICYADFIWTRNKHGD 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           SKYPLVPGHEIVG+VKEVG +V+RFK GD VGVGTYVNSC+DC+YCND  EV+C + SV 
Sbjct: 61  SKYPLVPGHEIVGVVKEVGSSVTRFKAGDRVGVGTYVNSCKDCDYCNDRQEVYCVKGSVL 120

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFNAID DGT+TKGGYSS++VVHERYC++I NDYP ALAAPLLCAGITVY PMMRH MNQ
Sbjct: 121 TFNAIDMDGTVTKGGYSSHLVVHERYCFRIPNDYPSALAAPLLCAGITVYNPMMRHGMNQ 180

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGK+LGVIGLGGLGHMAVKFGKAFGL VTV STS SKKEEALS+L AD FVVSSD EQMK
Sbjct: 181 PGKALGVIGLGGLGHMAVKFGKAFGLKVTVFSTSISKKEEALSVLDADNFVVSSDQEQMK 240

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           A   SLDFI+DTASGDHPFD YMSLLK AGV VLVGFPS+VKFSPASLN+          
Sbjct: 241 AFSNSLDFIVDTASGDHPFDPYMSLLKTAGVLVLVGFPSEVKFSPASLNLGMKTVSGSIT 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           GGT+ TQEML++CAAHKIYP+IE +PI+  N ALERL+KRDVKYRFVIDI+NSL
Sbjct: 301 GGTQVTQEMLDFCAAHKIYPKIELVPIDYANAALERLVKRDVKYRFVIDIENSL 354

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|297842013|ref|XP_002888888.1| hypothetical protein ARALYDRAFT_895120 [Arabidopsis lyrata subsp. lyrata] gi|297334729|gb|EFH65147.1| hypothetical protein ARALYDRAFT_895120 [Arabidopsis lyrata subsp. lyrata]

 Score =  554 bits (1427), Expect = e-155,   Method: Compositional matrix adjust.
 Identities = 270/352 (76%), Positives = 308/352 (87%), Gaps = 10/352 (2%)

Query: 2   TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS 61
           +SET   +C+ WAA+DPSG+LSP+ F RR+V SDDVS+ ITHCGVCYADVIWTRN+HGDS
Sbjct: 3   SSETGENECMCWAAKDPSGLLSPHKFTRRSVTSDDVSLKITHCGVCYADVIWTRNQHGDS 62

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
           KYPLVPGHEI GIV +VG NV RFKVGDHVGVGTYVNSCR+CEYCNDG EV+CA+ V+TF
Sbjct: 63  KYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNDGQEVNCAKGVFTF 122

Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG 181
           N ID DG++TKGGYSS+IVVHERYCYKI  DYPL  AAPLLCAGITV+ PMMRH MNQPG
Sbjct: 123 NGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVFAPMMRHNMNQPG 182

Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL 241
           KSLGVIGLGGLGHMAVKFGKAFGL+VTV STS SKKEEAL+LLGA+ FV+SSD +QMKAL
Sbjct: 183 KSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKAL 242

Query: 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI----------GG 291
            KSLDFIIDTASGDH FD YMSLLK+AG YVLVGFPS++K SPA+LN+          GG
Sbjct: 243 AKSLDFIIDTASGDHAFDPYMSLLKIAGTYVLVGFPSEIKISPANLNLGMRMLAGSVTGG 302

Query: 292 TKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           TK TQEM+++CAAHKIYP IE IPI+N+NEALER++K+D+KYRFVIDI+NSL
Sbjct: 303 TKITQEMIDFCAAHKIYPNIEVIPIQNINEALERVVKKDIKYRFVIDIKNSL 354

Source: Arabidopsis lyrata subsp. lyrata

Species: Arabidopsis lyrata

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356554814|ref|XP_003545737.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 277/355 (78%), Positives = 306/355 (86%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M+S+   +DCLGWAARD SGVLSPY F+RR  G++DV I ITHCGVC+ADV+WTRNKHGD
Sbjct: 1   MSSKGVGEDCLGWAARDASGVLSPYKFSRRTPGNEDVLIKITHCGVCFADVVWTRNKHGD 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           SKYP+VPGHEI GIV +VG NV RFKVGDHVGVGTYVNSCRDCE+CND  EVHC + SV+
Sbjct: 61  SKYPVVPGHEIAGIVTKVGSNVHRFKVGDHVGVGTYVNSCRDCEHCNDREEVHCTKGSVF 120

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN +D DGTITKGGYSSYIVVHERYC+ I   Y LA AAPLLCAGITVY+PM+RHKMNQ
Sbjct: 121 TFNGVDFDGTITKGGYSSYIVVHERYCFTIPKSYALASAAPLLCAGITVYSPMVRHKMNQ 180

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGVIGLGGLGHMAVKFGKAFGL+VTV STS SKKEEALSLLGADKFVVSS+ E+M 
Sbjct: 181 PGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALSLLGADKFVVSSNQEEMT 240

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           AL KSLDFIIDTASGDHPFD YMSLLK  GV+VLVGFPS+VKFSPASLNI          
Sbjct: 241 ALAKSLDFIIDTASGDHPFDPYMSLLKTYGVFVLVGFPSQVKFSPASLNIGSKTVAGSVT 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTKD QEM+++CAA++I+P IE IPIE  NEALERLI RDVKYRFVIDI+NSLK
Sbjct: 301 GGTKDIQEMIDFCAANEIHPNIEVIPIEYANEALERLINRDVKYRFVIDIENSLK 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|356549501|ref|XP_003543132.1| PREDICTED: probable cinnamyl alcohol dehydrogenase 1-like [Glycine max]

 Score =  550 bits (1417), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 276/355 (77%), Positives = 305/355 (85%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M+S+   +DCLGWAARD SGVLSPY F+RR +G++DV I ITHCGVC+ADV+WTRNKHGD
Sbjct: 1   MSSKGVGEDCLGWAARDASGVLSPYKFSRRTLGNEDVHIKITHCGVCFADVVWTRNKHGD 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           SKYP+VPGHEI GIV +VG NV  FKVGDHVGVGTY+NSCRDCEYCNDG EVHC + SVY
Sbjct: 61  SKYPVVPGHEIAGIVTKVGANVHHFKVGDHVGVGTYINSCRDCEYCNDGQEVHCTKGSVY 120

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN +D DGTITKGGYSSYIVVHERYC+ I   YPLA AAPLLCAGITVY+PM+RHKMNQ
Sbjct: 121 TFNGVDFDGTITKGGYSSYIVVHERYCFMIPKSYPLASAAPLLCAGITVYSPMVRHKMNQ 180

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGVIGLGGLGHMAVKFGKAFGL+VTV STS SKKEEALSLLGADKFVVSS+ E+M 
Sbjct: 181 PGKSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALSLLGADKFVVSSNQEEMT 240

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           AL KSLDFIIDTASGDH FD YMSLLK  GV+VLVGFPS+VKF PASLNI          
Sbjct: 241 ALAKSLDFIIDTASGDHSFDPYMSLLKTYGVFVLVGFPSQVKFIPASLNIGSKTVAGSVT 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTKD QEM+ +CAA++I+P IE IPIE  NEALERLI RDVKYRFVID++NSLK
Sbjct: 301 GGTKDIQEMIGFCAANEIHPNIEVIPIEYANEALERLINRDVKYRFVIDVENSLK 355

Source: Glycine max

Species: Glycine max

Genus: Glycine

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|15218564|ref|NP_177412.1| putative cinnamyl alcohol dehydrogenase 1 [Arabidopsis thaliana] gi|75333650|sp|Q9CAI3.1|CADH1_ARATH RecName: Full=Probable cinnamyl alcohol dehydrogenase 1; Short=AtCAD1 gi|12323770|gb|AAG51850.1|AC010926_13 putative cinnamyl-alcohol dehydrogenase; 49641-51171 [Arabidopsis thaliana] gi|27311669|gb|AAO00800.1| Unknown protein [Arabidopsis thaliana] gi|31075039|gb|AAP40269.1| putative alcohol dehydrogenase [Arabidopsis thaliana] gi|31711846|gb|AAP68279.1| At1g72680 [Arabidopsis thaliana] gi|332197239|gb|AEE35360.1| putative cinnamyl alcohol dehydrogenase 1 [Arabidopsis thaliana]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 266/353 (75%), Positives = 309/353 (87%), Gaps = 10/353 (2%)

Query: 2   TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS 61
           +SE+   +C+ WAARDPSG+LSP++  RR+V +DDVS+TITHCGVCYADVIW+RN+HGDS
Sbjct: 3   SSESVENECMCWAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDS 62

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
           KYPLVPGHEI GIV +VG NV RFKVGDHVGVGTYVNSCR+CEYCN+G EV+CA+ V+TF
Sbjct: 63  KYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTF 122

Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG 181
           N ID DG++TKGGYSS+IVVHERYCYKI  DYPL  AAPLLCAGITVY PMMRH MNQPG
Sbjct: 123 NGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPG 182

Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL 241
           KSLGVIGLGGLGHMAVKFGKAFGL+VTV STS SKKEEAL+LLGA+ FV+SSD +QMKAL
Sbjct: 183 KSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKAL 242

Query: 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI----------GG 291
            KSLDF++DTASGDH FD YMSLLK+AG YVLVGFPS++K SPA+LN+          GG
Sbjct: 243 EKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSEIKISPANLNLGMRMLAGSVTGG 302

Query: 292 TKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           TK TQ+ML++CAAHKIYP IE IPI+ +NEALER++K+D+KYRFVIDI+NSLK
Sbjct: 303 TKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSLK 355

Source: Arabidopsis thaliana

Species: Arabidopsis thaliana

Genus: Arabidopsis

Family: Brassicaceae

Order: Brassicales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|268528129|gb|ACZ06241.1| cinnamyl alcohol dehydrogenase 5 [Gossypium hirsutum]

 Score =  549 bits (1414), Expect = e-154,   Method: Compositional matrix adjust.
 Identities = 277/355 (78%), Positives = 305/355 (85%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M S+T +++CLGWAA DP+GVLSPY F+RR +GSDDVSI ITHCGVCYADVIW+RN  GD
Sbjct: 1   MDSQTKTENCLGWAATDPTGVLSPYKFSRRPLGSDDVSIKITHCGVCYADVIWSRNMFGD 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VY 119
           S YPLVPGHEI GIVKEVG NV R KVGD VGVGTYVNSCR+CEYCNDG+EV C +  V 
Sbjct: 61  SIYPLVPGHEIAGIVKEVGSNVQRIKVGDLVGVGTYVNSCRNCEYCNDGVEVQCVKGPVL 120

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN ID DGT+TKGGYSS+IVVHERYC+KI N+YPLA AAPLLCAGITVYTPMMR+ MNQ
Sbjct: 121 TFNHIDIDGTVTKGGYSSHIVVHERYCFKIPNNYPLASAAPLLCAGITVYTPMMRYNMNQ 180

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGVIGLGGLGHMAVKFGKAFGL+VTVLSTS SKKEEALSLLGAD FVV+SD EQMK
Sbjct: 181 PGKSLGVIGLGGLGHMAVKFGKAFGLSVTVLSTSISKKEEALSLLGADNFVVTSDQEQMK 240

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN----------I 289
            L KSLDFIIDTASGDHPFD Y+SLLK AGVY LVGFPS++KFSPASLN           
Sbjct: 241 GLSKSLDFIIDTASGDHPFDPYLSLLKSAGVYALVGFPSEIKFSPASLNPGMKTFAGSVT 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTK  QEM+ +CAA KIYPQIE IPI+  NEALERL+K+DVKYRFVIDI+N+LK
Sbjct: 301 GGTKMIQEMIGFCAARKIYPQIEVIPIQYANEALERLVKKDVKYRFVIDIENTLK 355

Source: Gossypium hirsutum

Species: Gossypium hirsutum

Genus: Gossypium

Family: Malvaceae

Order: Malvales

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|192912952|gb|ACF06584.1| cinnamyl alcohol dehydrogenase [Elaeis guineensis]

 Score =  535 bits (1379), Expect = e-150,   Method: Compositional matrix adjust.
 Identities = 267/355 (75%), Positives = 302/355 (85%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M +E  S DCL WAARD SG+LSPY FNRR V S+DV I ITHCGVCYADV  TRN HGD
Sbjct: 1   MDTEIGSGDCLAWAARDASGILSPYRFNRRVVRSNDVRIEITHCGVCYADVHMTRNLHGD 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           +KYPLVPGHEIVG+V EVG NV  FKVGDH GVGTYVNSC +CEYCND LEVHC++ S++
Sbjct: 61  TKYPLVPGHEIVGVVTEVGSNVKGFKVGDHAGVGTYVNSCGECEYCNDFLEVHCSKGSIF 120

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN +D+DGTITKGGYSSYI+V ERYCY I + YPLA+AAPLLCAGITVYTPMMRHKMNQ
Sbjct: 121 TFNGLDSDGTITKGGYSSYIIVKERYCYMIPDGYPLAMAAPLLCAGITVYTPMMRHKMNQ 180

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGVIGLGGLGHMAVKFGKAFGL VTV STS SKKEEAL LLGADKFV+SSD +QM+
Sbjct: 181 PGKSLGVIGLGGLGHMAVKFGKAFGLKVTVFSTSKSKKEEALKLLGADKFVISSDQQQME 240

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           ++ KSLDFI+DTASGDHPFD YMSLLK+ GV VLVGFPS+V+ +P SLN+          
Sbjct: 241 SMTKSLDFIVDTASGDHPFDPYMSLLKIGGVLVLVGFPSEVRLNPGSLNLGSRSISGSLT 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTK+TQ MLE+CAA+K+YP+IE I I+ +NEA+ERLI RDVKYRFVIDI+NSLK
Sbjct: 301 GGTKETQRMLEFCAANKVYPEIELINIQYINEAIERLINRDVKYRFVIDIKNSLK 355

Source: Elaeis guineensis

Species: Elaeis guineensis

Genus: Elaeis

Family: Arecaceae

Order: Arecales

Class: Liliopsida

Phylum: Streptophyta

Superkingdom: Eukaryota

>gi|357446025|ref|XP_003593290.1| Cinnamyl alcohol dehydrogenase [Medicago truncatula] gi|355482338|gb|AES63541.1| Cinnamyl alcohol dehydrogenase [Medicago truncatula]

 Score =  533 bits (1373), Expect = e-149,   Method: Compositional matrix adjust.
 Identities = 265/355 (74%), Positives = 300/355 (84%), Gaps = 11/355 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M+SE   +DCL WAARD SGVLSPY FNRR +GS+DV + ITHCGVCYADVIW +NKHGD
Sbjct: 52  MSSEGVGEDCLAWAARDASGVLSPYKFNRRELGSEDVYVKITHCGVCYADVIWAKNKHGD 111

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVY 119
           SKYP+VPGHEI G+V +VG NV RFKVGDHVGVGTY+NSCR+CEYCND  EVHC + SVY
Sbjct: 112 SKYPVVPGHEIAGVVAKVGPNVQRFKVGDHVGVGTYINSCRECEYCNDRFEVHCVKGSVY 171

Query: 120 TFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           TFN +D DGTITKGGYS+ IVVHERYC+ I   YPLA A PLLCAGITVY+PM+RH MNQ
Sbjct: 172 TFNGVDYDGTITKGGYSTSIVVHERYCFLIPKSYPLASAGPLLCAGITVYSPMIRHNMNQ 231

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGKSLGV+GLGGLGHMAVKFGKAFGL VTV STS SKKEEALSLLGAD+FVVSS+ E M+
Sbjct: 232 PGKSLGVVGLGGLGHMAVKFGKAFGLRVTVFSTSMSKKEEALSLLGADQFVVSSNQEDMR 291

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------- 289
           AL KSLDFIIDTASGDH FD YMSLLK++GV VLVGFPS+VKFSPASLN+          
Sbjct: 292 ALAKSLDFIIDTASGDHLFDPYMSLLKISGVLVLVGFPSEVKFSPASLNLGSRTVAGSVT 351

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           GGTK+ QEM+++CAA+ I+P IE IPI   NEALER++ +DVKYRFVIDI+NSLK
Sbjct: 352 GGTKEIQEMVDFCAANGIHPDIELIPIGYSNEALERVVNKDVKYRFVIDIENSLK 406

Source: Medicago truncatula

Species: Medicago truncatula

Genus: Medicago

Family: Fabaceae

Order: Fabales

Phylum: Streptophyta

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	344
TAIR|locus:2030210	355	CAD1 "cinnamyl-alcohol dehydro	0.997	0.966	0.728	3.7e-142
TAIR|locus:2052494	375	CAD3 "cinnamyl alcohol dehydro	0.965	0.885	0.497	8e-85
TAIR|locus:2052516	376	CAD2 "cinnamyl alcohol dehydro	0.965	0.882	0.501	5.6e-84
TAIR|locus:2136278	360	CAD9 "cinnamyl alcohol dehydro	0.965	0.922	0.492	1.2e-83
TAIR|locus:2120968	363	CAD6 "cinnamyl alcohol dehydro	0.979	0.928	0.459	6e-80
TAIR|locus:2005527	357	ELI3-1 "elicitor-activated gen	0.976	0.941	0.467	2e-79
TAIR|locus:2005528	359	ELI3-2 "elicitor-activated gen	0.976	0.935	0.467	1.8e-78
UNIPROTKB|Q0JA75	379	CAD7 "Cinnamyl alcohol dehydro	0.982	0.891	0.441	1.5e-76
TAIR|locus:2090704	365	ATCAD4 [Arabidopsis thaliana (	0.985	0.928	0.437	6.3e-76
TAIR|locus:2124311	357	CAD5 "cinnamyl alcohol dehydro	0.979	0.943	0.433	2.7e-75

TAIR|locus:2030210 CAD1 "cinnamyl-alcohol dehydrogenase" [Arabidopsis thaliana (taxid:3702)]

 Score = 1390 (494.4 bits), Expect = 3.7e-142, P = 3.7e-142
 Identities = 257/353 (72%), Positives = 300/353 (84%)

Query:     2 TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS 61
             +SE+   +C+ WAARDPSG+LSP++  RR+V +DDVS+TITHCGVCYADVIW+RN+HGDS
Sbjct:     3 SSESVENECMCWAARDPSGLLSPHTITRRSVTTDDVSLTITHCGVCYADVIWSRNQHGDS 62

Query:    62 KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
             KYPLVPGHEI GIV +VG NV RFKVGDHVGVGTYVNSCR+CEYCN+G EV+CA+ V+TF
Sbjct:    63 KYPLVPGHEIAGIVTKVGPNVQRFKVGDHVGVGTYVNSCRECEYCNEGQEVNCAKGVFTF 122

Query:   122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPG 181
             N ID DG++TKGGYSS+IVVHERYCYKI  DY           GITVY PMMRH MNQPG
Sbjct:   123 NGIDHDGSVTKGGYSSHIVVHERYCYKIPVDYPLESAAPLLCAGITVYAPMMRHNMNQPG 182

Query:   182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL 241
             KSLGVIGLGGLGHMAVKFGKAFGL+VTV STS SKKEEAL+LLGA+ FV+SSD +QMKAL
Sbjct:   183 KSLGVIGLGGLGHMAVKFGKAFGLSVTVFSTSISKKEEALNLLGAENFVISSDHDQMKAL 242

Query:   242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIG----------G 291
              KSLDF++DTASGDH FD YMSLLK+AG YVLVGFPS++K SPA+LN+G          G
Sbjct:   243 EKSLDFLVDTASGDHAFDPYMSLLKIAGTYVLVGFPSEIKISPANLNLGMRMLAGSVTGG 302

Query:   292 TKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
             TK TQ+ML++CAAHKIYP IE IPI+ +NEALER++K+D+KYRFVIDI+NSLK
Sbjct:   303 TKITQQMLDFCAAHKIYPNIEVIPIQKINEALERVVKKDIKYRFVIDIKNSLK 355

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016616 "oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor" evidence=IEA

GO:0048037 "cofactor binding" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IEP;TAS

GO:0005829 "cytosol" evidence=IDA

GO:0006635 "fatty acid beta-oxidation" evidence=RCA

GO:0009627 "systemic acquired resistance" evidence=RCA

GO:0034976 "response to endoplasmic reticulum stress" evidence=RCA

GO:0046482 "para-aminobenzoic acid metabolic process" evidence=RCA

TAIR|locus:2052494 CAD3 "cinnamyl alcohol dehydrogenase homolog 3" [Arabidopsis thaliana (taxid:3702)]

 Score = 849 (303.9 bits), Expect = 8.0e-85, P = 8.0e-85
 Identities = 171/344 (49%), Positives = 226/344 (65%)

Query:    12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
             GWAA D SGVLSP+ F+RR  G +DV++ I  CGVC++D+   +N  G S+YP++PGHEI
Sbjct:     9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68

Query:    72 VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTIT 131
             VGI  +VG NV++FK GD VGVG  + SC+ CE CN  LE +C + V+T+N+  +DGT  
Sbjct:    69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRN 128

Query:   132 KGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMN-QPGKSLGVIGLG 190
             +GGYS  IVV  R+   I +             GITVY+PM  + M  + GK LGV GLG
Sbjct:   129 QGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGLG 188

Query:   191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250
             GLGH+AVK GKAFGL VTV+S S+ K+ EA+  LGAD F+V++D ++MK    ++DFIID
Sbjct:   189 GLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFIID 248

Query:   251 TASGDHPFDAYMSLLKVAGVYVLVGF---PSKVKFSPASLN--------IGGTKDTQEML 299
             T S +H      SLLKV+G  V +G    P  +   P  L         IGG K+TQEML
Sbjct:   249 TVSAEHALLPLFSLLKVSGKLVALGLLEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEML 308

Query:   300 EYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
             E+CA HKI   IE I + ++N A++RL+K DV+YRFVID+ NSL
Sbjct:   309 EFCAKHKIVSDIELIKMSDINSAMDRLVKSDVRYRFVIDVANSL 352

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2052516 CAD2 "cinnamyl alcohol dehydrogenase homolog 2" [Arabidopsis thaliana (taxid:3702)]

 Score = 841 (301.1 bits), Expect = 5.6e-84, P = 5.6e-84
 Identities = 173/345 (50%), Positives = 225/345 (65%)

Query:    12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
             GWAA D SGVLSP+ F+RR  G +DV++ I  CGVC++D+   +N  G S+YP++PGHEI
Sbjct:     9 GWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEI 68

Query:    72 VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI- 130
             VGI  +VG NV++FK GD VGVG  + SC+ CE CN  LE +C + V+T+N+  +DGT  
Sbjct:    69 VGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTSR 128

Query:   131 TKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMN-QPGKSLGVIGL 189
              +GGYS  IVV  R+   I +             GITVY+PM  + M  + GK LGV GL
Sbjct:   129 NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL 188

Query:   190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
             GGLGH+AVK GKAFGL VTV+S S+ K+ EA+  LGAD F+V++D ++MK    ++DFII
Sbjct:   189 GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFII 248

Query:   250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA-SL----------NIGGTKDTQEM 298
             DT S +H      SLLKV G  V +G P K    P  SL           IGG K+TQEM
Sbjct:   249 DTVSAEHALLPLFSLLKVNGKLVALGLPEKPLDLPIFSLVLGRKMVGGSQIGGMKETQEM 308

Query:   299 LEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
             LE+CA HKI   IE I + ++N A++RL K DV+YRFVID+ NSL
Sbjct:   309 LEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IC

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

TAIR|locus:2136278 CAD9 "cinnamyl alcohol dehydrogenase 9" [Arabidopsis thaliana (taxid:3702)]

 Score = 838 (300.0 bits), Expect = 1.2e-83, P = 1.2e-83
 Identities = 169/343 (49%), Positives = 225/343 (65%)

Query:    12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
             GW ARD SGVLSP+ F+RR  G +DV++ I  CGVC+ D+   +N  G S YP+VPGHEI
Sbjct:    15 GWGARDKSGVLSPFHFSRRDNGENDVTVKILFCGVCHTDLHTIKNDWGYSYYPVVPGHEI 74

Query:    72 VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTIT 131
             VGI  +VG NV++FK GD VGVG    SC+ CE C+  LE +C +  +T+NAI +DGT  
Sbjct:    75 VGIATKVGKNVTKFKEGDRVGVGVISGSCQSCESCDQDLENYCPQMSFTYNAIGSDGTKN 134

Query:   132 KGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGG 191
              GGYS  IVV +R+  +   +            GITVY+PM  + M + GK LGV GLGG
Sbjct:   135 YGGYSENIVVDQRFVLRFPENLPSDSGAPLLCAGITVYSPMKYYGMTEAGKHLGVAGLGG 194

Query:   192 LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT 251
             LGH+AVK GKAFGL VTV+S+S++K EEA++ LGAD F+V++D ++MKA   ++D+IIDT
Sbjct:   195 LGHVAVKIGKAFGLKVTVISSSSTKAEEAINHLGADSFLVTTDPQKMKAAIGTMDYIIDT 254

Query:   252 ASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPASL--------NIGGTKDTQEMLE 300
              S  H     + LLKV G  + +G P K   +   P  L        ++GG K+TQEML+
Sbjct:   255 ISAVHALYPLLGLLKVNGKLIALGLPEKPLELPMFPLVLGRKMVGGSDVGGMKETQEMLD 314

Query:   301 YCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
             +CA H I   IE I ++ +N A+ERL K DV+YRFVID+ NSL
Sbjct:   315 FCAKHNITADIELIKMDEINTAMERLAKSDVRYRFVIDVANSL 357

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

GO:0048046 "apoplast" evidence=IDA

TAIR|locus:2120968 CAD6 "cinnamyl alcohol dehydrogenase 6" [Arabidopsis thaliana (taxid:3702)]

 Score = 803 (287.7 bits), Expect = 6.0e-80, P = 6.0e-80
 Identities = 160/348 (45%), Positives = 223/348 (64%)

Query:     7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLV 66
             S +  GWAARD SG LSP+ F+RR  G ++V + + +CG+C++D+   +N+   S YPLV
Sbjct:    11 SVEAFGWAARDSSGHLSPFVFSRRKTGEEEVRVKVLYCGICHSDLHCLKNEWHSSIYPLV 70

Query:    67 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA 126
             PGHEI+G V E+G+ VS+F +GD VGVG  V+SCR CE C +  E +C +++ T+N +  
Sbjct:    71 PGHEIIGEVSEIGNKVSKFNLGDKVGVGCIVDSCRTCESCREDQENYCTKAIATYNGVHH 130

Query:   127 DGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
             DGTI  GGYS +IVV ERY  KI +             GI++Y+PM    +  P K +G+
Sbjct:   131 DGTINYGGYSDHIVVDERYAVKIPHTLPLVSAAPLLCAGISMYSPMKYFGLTGPDKHVGI 190

Query:   187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD 246
             +GLGGLGH+ V+F KAFG  VTV+S++T K ++AL  LGAD F+VS+D +QMKA   ++D
Sbjct:   191 VGLGGLGHIGVRFAKAFGTKVTVVSSTTGKSKDALDTLGADGFLVSTDEDQMKAAMGTMD 250

Query:   247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKV-----------KFSPASLNIGGTKDT 295
              IIDT S  H     + LLK  G  VL+G   K            + S A   IGG ++T
Sbjct:   251 GIIDTVSASHSISPLIGLLKSNGKLVLLGATEKPFDISAFSLILGRKSIAGSGIGGMQET 310

Query:   296 QEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
             QEM+++ A H I  +IE I ++ VN A++RL K DV+YRFVIDI N+L
Sbjct:   311 QEMIDFAAEHGIKAEIEIISMDYVNTAMDRLAKGDVRYRFVIDISNTL 358

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2005527 ELI3-1 "elicitor-activated gene 3-1" [Arabidopsis thaliana (taxid:3702)]

 Score = 798 (286.0 bits), Expect = 2.0e-79, P = 2.0e-79
 Identities = 163/349 (46%), Positives = 220/349 (63%)

Query:     8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
             K+  G AA+D SG+LSP+SF+RRA G  DV   +  CG+C+ D+   +N+ G + YPLVP
Sbjct:     7 KEAFGLAAKDESGILSPFSFSRRATGEKDVRFKVLFCGICHTDLSMAKNEWGLTTYPLVP 66

Query:    68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD 127
             GHEIVG+V EVG  V +F  GD VGVG    SCR C+ CNDG E +C + + T  A + D
Sbjct:    67 GHEIVGVVTEVGAKVKKFNAGDKVGVGYMAGSCRSCDSCNDGDENYCPKMILTSGAKNFD 126

Query:   128 GTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVI 187
              T+T GGYS ++V  E +  +I ++            G+TVY+PM  H +++PG  +GV+
Sbjct:   127 DTMTHGGYSDHMVCAEDFIIRIPDNLPLDGAAPLLCAGVTVYSPMKYHGLDKPGMHIGVV 186

Query:   188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK-ALGKSLD 246
             GLGGLGH+AVKF KA G  VTV+STS  K++EA++ LGAD F+VS D +QMK A+G ++D
Sbjct:   187 GLGGLGHVAVKFAKAMGTKVTVISTSERKRDEAVTRLGADAFLVSRDPKQMKDAMG-TMD 245

Query:   247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA-----------SLNIGGTKDT 295
              IIDT S  HP    + LLK  G  V+VG P++    P               +GG K+T
Sbjct:   246 GIIDTVSATHPLLPLLGLLKNKGKLVMVGAPAEPLELPVFPLIFGRKMVVGSMVGGIKET 305

Query:   296 QEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
             QEM++    H I   IE I  + VN A+ERL K DVKYRFVID+ N++K
Sbjct:   306 QEMVDLAGKHNITADIELISADYVNTAMERLAKADVKYRFVIDVANTMK 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

TAIR|locus:2005528 ELI3-2 "elicitor-activated gene 3-2" [Arabidopsis thaliana (taxid:3702)]

 Score = 789 (282.8 bits), Expect = 1.8e-78, P = 1.8e-78
 Identities = 163/349 (46%), Positives = 220/349 (63%)

Query:     8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
             K+  G AA+D SGVLSP+SF RR  G  DV   +  CG+C++D+   +N+ G S YPLVP
Sbjct:     7 KEAFGLAAKDNSGVLSPFSFTRRETGEKDVRFKVLFCGICHSDLHMVKNEWGMSTYPLVP 66

Query:    68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD 127
             GHEIVG+V EVG  V++FK G+ VGVG  V+SC  C+ C +G+E +C +S+ T+     D
Sbjct:    67 GHEIVGVVTEVGAKVTKFKTGEKVGVGCLVSSCGSCDSCTEGMENYCPKSIQTYGFPYYD 126

Query:   128 GTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVI 187
              TIT GGYS ++V  E +  +I ++            GITVY+PM  H +++PG  +GV+
Sbjct:   127 NTITYGGYSDHMVCEEGFVIRIPDNLPLDAAAPLLCAGITVYSPMKYHGLDKPGMHIGVV 186

Query:   188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK-ALGKSLD 246
             GLGGLGH+ VKF KA G  VTV+STS  K++EA++ LGAD F+VS D +Q+K A+G ++D
Sbjct:   187 GLGGLGHVGVKFAKAMGTKVTVISTSEKKRDEAINRLGADAFLVSRDPKQIKDAMG-TMD 245

Query:   247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPASLN--------IGGTKDT 295
              IIDT S  H     + LLK  G  V+VG P K   +   P            IGG K+T
Sbjct:   246 GIIDTVSATHSLLPLLGLLKHKGKLVMVGAPEKPLELPVMPLIFERKMVMGSMIGGIKET 305

Query:   296 QEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
             QEM++    H I   IE I  + VN A+ERL K DV+YRFVID+ N+LK
Sbjct:   306 QEMIDMAGKHNITADIELISADYVNTAMERLEKADVRYRFVIDVANTLK 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0046029 "mannitol dehydrogenase activity" evidence=IDA

GO:0047681 "aryl-alcohol dehydrogenase (NADP+) activity" evidence=IDA

GO:0009617 "response to bacterium" evidence=IEP

GO:0009626 "plant-type hypersensitive response" evidence=IGI

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA

GO:0009809 "lignin biosynthetic process" evidence=IEP

GO:0006865 "amino acid transport" evidence=RCA

GO:0009407 "toxin catabolic process" evidence=RCA

GO:0010583 "response to cyclopentenone" evidence=RCA

UNIPROTKB|Q0JA75 CAD7 "Cinnamyl alcohol dehydrogenase 7" [Oryza sativa Japonica Group (taxid:39947)]

 Score = 771 (276.5 bits), Expect = 1.5e-76, P = 1.5e-76
 Identities = 158/358 (44%), Positives = 224/358 (62%)

Query:     7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLV 66
             ++  +G AA D SG L+P   +RR  G DDV+I + +CG+C++D+   +N+  ++ YP+V
Sbjct:    20 TRKAVGLAAHDDSGHLTPIRISRRKTGDDDVAIKVLYCGICHSDLHTIKNEWRNAVYPVV 79

Query:    67 PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV-YTFNAID 125
              GHEI G+V EVG NV+RFK GD VGVG  VN+C  CE C DG E +C+  V +T+N++D
Sbjct:    80 AGHEITGVVTEVGKNVARFKAGDEVGVGCMVNTCGGCESCRDGCENYCSGGVVFTYNSVD 139

Query:   126 ADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXX--------XGITVYTPMMRHKM 177
              DGT T GGYS  +VV +R+  +  +                     G+TVY PM +H +
Sbjct:   140 RDGTRTYGGYSDAVVVSQRFVVRFPSSAGGGAGAALPLDSGAPLLCAGVTVYAPMRQHGL 199

Query:   178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
              + GK +GV+GLGGLGH+AVKF +AFG+ VTV+STS  K++EAL  LGAD F+VS++  +
Sbjct:   200 CEAGKHVGVVGLGGLGHVAVKFARAFGMRVTVISTSPVKRQEALERLGADGFIVSTNASE 259

Query:   238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTK---- 293
             MKA   ++  II+TAS      +Y++LLK  G  +LVG P K    P    +GG K    
Sbjct:   260 MKAAMGTMHGIINTASASTSMHSYLALLKPKGKMILVGLPEKPLQIPTFALVGGGKILAG 319

Query:   294 -------DTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
                    +TQEM+++ A H +   IE I  + VN A+ERL K DV+YRFV+DI N+L+
Sbjct:   320 SCMGSISETQEMIDFAAEHGVAADIELIGADEVNTAMERLAKGDVRYRFVVDIGNTLR 377

GO:0009809 "lignin biosynthetic process" evidence=IMP

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IMP

TAIR|locus:2090704 ATCAD4 [Arabidopsis thaliana (taxid:3702)]

 Score = 765 (274.4 bits), Expect = 6.3e-76, P = 6.3e-76
 Identities = 153/350 (43%), Positives = 219/350 (62%)

Query:     4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKY 63
             E   K  LGWAARDPSGVLSPYS+  R+ G+DDV I +  CG+C+ D+   +N  G S Y
Sbjct:     5 EAGEKKALGWAARDPSGVLSPYSYTLRSTGADDVYIKVICCGICHTDIHQIKNDLGMSNY 64

Query:    64 PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA 123
             P+VPGHE+VG V EVG +VS+F VGD VGVG  V  C  C+ C+  LE +C + ++++N 
Sbjct:    65 PMVPGHEVVGEVLEVGSDVSKFTVGDVVGVGVVVGCCGSCKPCSSELEQYCNKRIWSYND 124

Query:   124 IDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
             +  DG  T+GG++  ++V++++  KI               G+TVY+P+    +   G  
Sbjct:   125 VYTDGKPTQGGFADTMIVNQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLMASGLK 184

Query:   184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGK 243
              G++GLGG+GHM VK  KA G +VTV+S+S  KKEEA+  LGAD +VVSSD  +M+ L  
Sbjct:   185 GGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKKEEAIEHLGADDYVVSSDPAEMQRLAD 244

Query:   244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKF-SPASLN---------IGGT 292
             SLD+IIDT    HP D Y++ LK+ G  +L+G   + ++F +P  +          IG  
Sbjct:   245 SLDYIIDTVPVFHPLDPYLACLKLDGKLILMGVINTPLQFVTPLVILGRKVISGSFIGSI 304

Query:   293 KDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
             K+T+E+L +C    +   IET+ I+ +N A ERL K DV+YRFV+D+  S
Sbjct:   305 KETEEVLAFCKEKGLTSTIETVKIDELNIAFERLRKNDVRYRFVVDVAGS 354

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;TAS

GO:0080167 "response to karrikin" evidence=IEP

TAIR|locus:2124311 CAD5 "cinnamyl alcohol dehydrogenase 5" [Arabidopsis thaliana (taxid:3702)]

 Score = 759 (272.2 bits), Expect = 2.7e-75, P = 2.7e-75
 Identities = 151/348 (43%), Positives = 216/348 (62%)

Query:     6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL 65
             A +   GWAARDPSG+LSPY++  R  G +DV+I I  CG+C+ D+  T+N  G S YP+
Sbjct:     6 AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM 65

Query:    66 VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID 125
             VPGHE+VG V EVG +VS+F VGD VGVG  V  C  C  C   LE +C + ++++N + 
Sbjct:    66 VPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVY 125

Query:   126 ADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG 185
              +G  T+GG++   VVH+++  KI               G+TVY+P+    + QPG   G
Sbjct:   126 INGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGG 185

Query:   186 VIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
             ++GLGG+GHM VK  KA G +VTV+S+S  K+EEAL  LGAD +V+ SD  +M  L  SL
Sbjct:   186 ILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSL 245

Query:   246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKF-SPASLN---------IGGTKD 294
             D++IDT    H  + Y+SLLK+ G  +L+G   + ++F +P  +          IG  K+
Sbjct:   246 DYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKE 305

Query:   295 TQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
             T+EMLE+C    +   IE + ++ VN A ERL K DV+YRFV+D++ S
Sbjct:   306 TEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGS 353

GO:0000166 "nucleotide binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=ISM

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016491 "oxidoreductase activity" evidence=IEA

GO:0016747 "transferase activity, transferring acyl groups other than amino-acyl groups" evidence=IEA

GO:0055114 "oxidation-reduction process" evidence=IEA

GO:0045551 "cinnamyl-alcohol dehydrogenase activity" evidence=IDA;IMP

GO:0009809 "lignin biosynthetic process" evidence=IGI;IMP;TAS

GO:0005829 "cytosol" evidence=IDA

GO:0006612 "protein targeting to membrane" evidence=RCA

GO:0006865 "amino acid transport" evidence=RCA

GO:0009611 "response to wounding" evidence=RCA

GO:0009805 "coumarin biosynthetic process" evidence=RCA

GO:0009963 "positive regulation of flavonoid biosynthetic process" evidence=RCA

GO:0010363 "regulation of plant-type hypersensitive response" evidence=RCA

GO:0015824 "proline transport" evidence=RCA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
P0A4X1	ADHC_MYCBO	1, ., 1, ., 1, ., 2	0.4277	0.9447	0.9393	yes	no
P0A4X0	ADHC_MYCTU	1, ., 1, ., 1, ., 2	0.4277	0.9447	0.9393	yes	no
P42754	MTDH_PETCR	1, ., 1, ., 1, ., 2, 5, 5	0.5074	0.9418	0.9614	N/A	no
C0SPA5	ADHA_BACSU	1, ., 1, ., 1, ., -	0.4359	0.9127	0.8997	yes	no
P93257	MTDH_MESCR	1, ., 1, ., 1, ., 2, 5, 5	0.5028	0.9796	0.9335	N/A	no
P0CH37	ADHC2_MYCS2	1, ., 1, ., 1, ., 2	0.4749	0.9418	0.9283	yes	no
Q8H859	CADH1_ORYSJ	1, ., 1, ., 1, ., 1, 9, 5	0.7005	1.0	0.9717	yes	no
Q9CAI3	CADH1_ARATH	1, ., 1, ., 1, ., 1, 9, 5	0.7535	0.9970	0.9661	yes	no
Q2KNL6	GEDH1_OCIBA	1, ., 1, ., 1, ., 1, 8, 3	0.5043	0.9709	0.9277	N/A	no
Q43137	MTDH1_STYHU	1, ., 1, ., 1, ., 2, 5, 5	0.5186	0.9796	0.9519	N/A	no
P0CH36	ADHC1_MYCS2	1, ., 1, ., 1, ., 2	0.4749	0.9418	0.9283	yes	no
Q9ZRF1	MTDH_FRAAN	1, ., 1, ., 1, ., 2, 5, 5	0.5172	0.9796	0.9387	N/A	no
O82515	MTDH_MEDSA	1, ., 1, ., 1, ., 2, 5, 5	0.5406	0.9651	0.9247	N/A	no
Q6V4H0	10HGO_CATRO	1, ., 1, ., 1, ., 3, 2, 4	0.5188	0.9709	0.9277	N/A	no

EC Number Prediction by Ezypred Server

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	1.1.1	0.921

---

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING

Original result from the STRING server

Fail to connect to STRING server

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database part I

ID	Length	Definition	E-value
Query	344
cd05283	337	cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CA	1e-178
PLN02586	360	PLN02586, PLN02586, probable cinnamyl alcohol dehy	1e-143
PLN02514	357	PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase	1e-127
PLN02178	375	PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase	1e-123
COG1064	339	COG1064, AdhP, Zn-dependent alcohol dehydrogenases	1e-112
cd08245	330	cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD	1e-107
cd08297	341	cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA	2e-72
cd08296	333	cd08296, CAD_like, Cinnamyl alcohol dehydrogenases	6e-67
cd08298	329	cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CA	1e-63
cd05284	340	cd05284, arabinose_DH_like, D-arabinose dehydrogen	1e-52
cd08254	338	cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e	2e-50
cd08240	350	cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexa	9e-48
cd05188	271	cd05188, MDR, Medium chain reductase/dehydrogenase	1e-47
cd08259	332	cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD	5e-45
COG1062	366	COG1062, AdhC, Zn-dependent alcohol dehydrogenases	6e-36
PRK09422	338	PRK09422, PRK09422, ethanol-active dehydrogenase/a	7e-35
PRK13771	334	PRK13771, PRK13771, putative alcohol dehydrogenase	6e-34
cd05289	309	cd05289, MDR_like_2, alcohol dehydrogenase and qui	5e-33
COG0604	326	COG0604, Qor, NADPH:quinone reductase and related	3e-32
COG1063	350	COG1063, Tdh, Threonine dehydrogenase and related	5e-32
cd08279	363	cd08279, Zn_ADH_class_III, Class III alcohol dehyd	5e-31
TIGR02822	329	TIGR02822, adh_fam_2, zinc-binding alcohol dehydro	2e-30
cd08241	323	cd08241, QOR1, Quinone oxidoreductase (QOR)	1e-29
pfam08240	108	pfam08240, ADH_N, Alcohol dehydrogenase GroES-like	3e-29
cd08260	345	cd08260, Zn_ADH6, Alcohol dehydrogenases of the MD	3e-29
cd08264	325	cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t	5e-29
cd08234	334	cd08234, threonine_DH_like, L-threonine dehydrogen	6e-29
cd08236	343	cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog	8e-29
cd08281	371	cd08281, liver_ADH_like1, Zinc-dependent alcohol d	2e-28
cd08278	365	cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydro	2e-28
cd08258	306	cd08258, Zn_ADH4, Alcohol dehydrogenases of the MD	6e-28
cd08263	367	cd08263, Zn_ADH10, Alcohol dehydrogenases of the M	1e-27
cd08239	339	cd08239, THR_DH_like, L-threonine dehydrogenase (T	2e-27
cd08233	351	cd08233, butanediol_DH_like, (2R,3R)-2,3-butanedio	3e-27
cd08267	319	cd08267, MDR1, Medium chain dehydrogenases/reducta	2e-26
cd08235	343	cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenas	3e-26
cd08277	365	cd08277, liver_alcohol_DH_like, Liver alcohol dehy	4e-26
cd08231	361	cd08231, MDR_TM0436_like, Hypothetical enzyme TM04	5e-26
cd08266	342	cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t	1e-24
cd08273	331	cd08273, MDR8, Medium chain dehydrogenases/reducta	1e-23
cd05279	365	cd05279, Zn_ADH1, Liver alcohol dehydrogenase and	2e-23
TIGR03989	369	TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 fa	2e-21
cd08261	337	cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD	1e-20
cd08275	337	cd08275, MDR3, Medium chain dehydrogenases/reducta	3e-18
cd08232	339	cd08232, idonate-5-DH, L-idonate 5-dehydrogenase	4e-18
cd08300	368	cd08300, alcohol_DH_class_III, class III alcohol d	5e-18
cd08276	336	cd08276, MDR7, Medium chain dehydrogenases/reducta	5e-18
cd05281	341	cd05281, TDH, Threonine dehydrogenase	6e-18
cd05276	323	cd05276, p53_inducible_oxidoreductase, PIG3 p53-in	6e-18
TIGR02818	368	TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutat	7e-18
TIGR03451	358	TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothi	3e-17
TIGR03366	280	TIGR03366, HpnZ_proposed, putative phosphonate cat	7e-17
TIGR03201	349	TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1	8e-17
cd08272	326	cd08272, MDR6, Medium chain dehydrogenases/reducta	2e-16
cd08268	328	cd08268, MDR2, Medium chain dehydrogenases/reducta	3e-16
cd08284	344	cd08284, FDH_like_2, Glutathione-dependent formald	3e-16
TIGR00692	340	TIGR00692, tdh, L-threonine 3-dehydrogenase	3e-16
cd08248	350	cd08248, RTN4I1, Human Reticulon 4 Interacting Pro	6e-16
TIGR02824	325	TIGR02824, quinone_pig3, putative NAD(P)H quinone	6e-16
cd05278	347	cd05278, FDH_like, Formaldehyde dehydrogenases	6e-16
PRK10309	347	PRK10309, PRK10309, galactitol-1-phosphate dehydro	1e-15
cd05285	343	cd05285, sorbitol_DH, Sorbitol dehydrogenase	2e-15
cd08299	373	cd08299, alcohol_DH_class_I_II_IV, class I, II, IV	5e-15
cd08230	355	cd08230, glucose_DH, Glucose dehydrogenase	7e-15
cd08301	369	cd08301, alcohol_DH_plants, Plant alcohol dehydrog	8e-15
pfam00107	131	pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase	8e-15
cd08265	384	cd08265, Zn_ADH3, Alcohol dehydrogenases of the MD	1e-14
cd08271	325	cd08271, MDR5, Medium chain dehydrogenases/reducta	2e-14
PLN02702	364	PLN02702, PLN02702, L-idonate 5-dehydrogenase	5e-14
cd08253	325	cd08253, zeta_crystallin, Zeta-crystallin with NAD	1e-13
cd08286	345	cd08286, FDH_like_ADH2, formaldehyde dehydrogenase	2e-13
cd08249	339	cd08249, enoyl_reductase_like, enoyl_reductase_lik	3e-13
cd08274	350	cd08274, MDR9, Medium chain dehydrogenases/reducta	5e-13
cd08269	312	cd08269, Zn_ADH9, Alcohol dehydrogenases of the MD	2e-12
cd05286	320	cd05286, QOR2, Quinone oxidoreductase (QOR)	2e-12
cd08242	319	cd08242, MDR_like, Medium chain dehydrogenases/red	4e-12
cd05195	293	cd05195, enoyl_red, enoyl reductase of polyketide	5e-12
PRK05396	341	PRK05396, tdh, L-threonine 3-dehydrogenase; Valida	7e-12
PRK09880	343	PRK09880, PRK09880, L-idonate 5-dehydrogenase; Pro	1e-11
cd08251	303	cd08251, polyketide_synthase, polyketide synthase	4e-11
cd08283	386	cd08283, FDH_like_1, Glutathione-dependent formald	4e-11
PLN02740	381	PLN02740, PLN02740, Alcohol dehydrogenase-like	4e-11
cd08255	277	cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro	7e-11
smart00829	287	smart00829, PKS_ER, Enoylreductase	1e-10
cd08287	345	cd08287, FDH_like_ADH3, formaldehyde dehydrogenase	2e-10
cd08252	336	cd08252, AL_MDR, Arginate lyase and other MDR fami	2e-10
PRK10083	339	PRK10083, PRK10083, putative oxidoreductase; Provi	5e-10
cd08246	393	cd08246, crotonyl_coA_red, crotonyl-CoA reductase	7e-10
cd08256	350	cd08256, Zn_ADH2, Alcohol dehydrogenases of the MD	1e-09
PTZ00354	334	PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi	1e-09
cd08289	326	cd08289, MDR_yhfp_like, Yhfp putative quinone oxid	2e-09
TIGR01751	398	TIGR01751, crot-CoA-red, crotonyl-CoA reductase	2e-09
cd08243	320	cd08243, quinone_oxidoreductase_like_1, Quinone ox	2e-09
PLN02827	378	PLN02827, PLN02827, Alcohol dehydrogenase-like	7e-09
cd08285	351	cd08285, NADP_ADH, NADP(H)-dependent alcohol dehyd	7e-09
cd08250	329	cd08250, Mgc45594_like, Mgc45594 gene product and	1e-08
TIGR02817	336	TIGR02817, adh_fam_1, zinc-binding alcohol dehydro	1e-07
cd08290	341	cd08290, ETR, 2-enoyl thioester reductase (ETR)	1e-07
cd05282	323	cd05282, ETR_like, 2-enoyl thioester reductase-lik	1e-07
cd08282	375	cd08282, PFDH_like, Pseudomonas putida aldehyde-di	1e-07
cd05280	325	cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ	6e-07
cd08262	341	cd08262, Zn_ADH8, Alcohol dehydrogenases of the MD	2e-06
TIGR02823	323	TIGR02823, oxido_YhdH, putative quinone oxidoreduc	5e-06
cd12169	308	cd12169, PGDH_like_1, Putative D-3-Phosphoglycerat	1e-05
TIGR02819	393	TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenas	3e-05
PRK13243	333	PRK13243, PRK13243, glyoxylate reductase; Reviewed	6e-05
COG0111	324	COG0111, SerA, Phosphoglycerate dehydrogenase and	1e-04
TIGR01202	308	TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacter	1e-04
cd12174	305	cd12174, PGDH_like_3, Putative D-3-Phosphoglycerat	6e-04
pfam02826	175	pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydro	6e-04
cd05301	309	cd05301, GDH, D-glycerate dehydrogenase/hydroxypyr	0.001
cd12161	315	cd12161, GDH_like_1, Putative glycerate dehydrogen	0.001
cd08270	305	cd08270, MDR4, Medium chain dehydrogenases/reducta	0.002
cd12155	314	cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2	0.002
cd08288	324	cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu	0.002
PRK06436	303	PRK06436, PRK06436, glycerate dehydrogenase; Provi	0.002
cd05300	313	cd05300, 2-Hacid_dh_1, Putative D-isomer specific	0.003
TIGR00507	270	TIGR00507, aroE, shikimate 5-dehydrogenase	0.003
cd12162	307	cd12162, 2-Hacid_dh_4, Putative D-isomer specific	0.004
cd12165	314	cd12165, 2-Hacid_dh_6, Putative D-isomer specific	0.004
cd05198	302	cd05198, formate_dh_like, Formate/glycerate and re	0.004

>gnl|CDD|176186 cd05283, CAD1, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  497 bits (1283), Expect = e-178
 Identities = 186/338 (55%), Positives = 231/338 (68%), Gaps = 13/338 (3%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
           G+AARD SG L P++F RR +G DDV I IT+CGVC++D+   RN+ G +KYPLVPGHEI
Sbjct: 2   GYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEI 61

Query: 72  VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTIT 131
           VGIV  VG  V++FKVGD VGVG  V+SC  CE C  G E +C + V T+N    DGTIT
Sbjct: 62  VGIVVAVGSKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTIT 121

Query: 132 KGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG 191
           +GGY+ +IVV ER+ +KI      A AAPLLCAGITVY+P+ R+ +  PGK +GV+G+GG
Sbjct: 122 QGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYSPLKRNGV-GPGKRVGVVGIGG 180

Query: 192 LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT 251
           LGH+AVKF KA G  VT  S S SKKE+AL  LGAD+F+ + D E MK    SLD IIDT
Sbjct: 181 LGHLAVKFAKALGAEVTAFSRSPSKKEDALK-LGADEFIATKDPEAMKKAAGSLDLIIDT 239

Query: 252 ASGDHPFDAYMSLLKVAGVYVLVGFPSK-VKFSPASL----------NIGGTKDTQEMLE 300
            S  H  D Y+SLLK  G  VLVG P + +   P  L           IGG K+TQEML+
Sbjct: 240 VSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLD 299

Query: 301 YCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVID 338
           + A H I P +E IP++ +NEALERL K DV+YRFV+D
Sbjct: 300 FAAEHGIKPWVEVIPMDGINEALERLEKGDVRYRFVLD 337

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|166227 PLN02586, PLN02586, probable cinnamyl alcohol dehydrogenase

 Score =  408 bits (1050), Expect = e-143
 Identities = 180/344 (52%), Positives = 242/344 (70%), Gaps = 11/344 (3%)

Query: 11  LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
            GWAARDPSGVLSP+ F+RR  G +DV++ I +CGVC++D+   +N+ G ++YP+VPGHE
Sbjct: 14  FGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHE 73

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
           IVGIV ++G NV +FK GD VGVG  V SC+ CE C+  LE +C + ++T+N+I  DGT 
Sbjct: 74  IVGIVTKLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTK 133

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLG 190
             GGYS  IVV + +  +  ++ PL   APLLCAGITVY+PM  + M +PGK LGV GLG
Sbjct: 134 NYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGLG 193

Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250
           GLGH+AVK GKAFGL VTV+S+S++K++EA++ LGAD F+VS+D E+MKA   ++D+IID
Sbjct: 194 GLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTMDYIID 253

Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPASL--------NIGGTKDTQEML 299
           T S  H     + LLKV G  + +G P K   +   P  L        +IGG K+TQEML
Sbjct: 254 TVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEML 313

Query: 300 EYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           ++CA H I   IE I ++ +N A+ERL K DV+YRFVID+ NSL
Sbjct: 314 DFCAKHNITADIELIRMDEINTAMERLAKSDVRYRFVIDVANSL 357

Length = 360

>gnl|CDD|166155 PLN02514, PLN02514, cinnamyl-alcohol dehydrogenase

 Score =  367 bits (944), Expect = e-127
 Identities = 161/353 (45%), Positives = 223/353 (63%), Gaps = 11/353 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M S  A K   GWAARDPSG LSPY++  R  G +DV I + +CG+C+ D+   +N  G 
Sbjct: 1   MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGM 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YP+VPGHE+VG V EVG +VS+F VGD VGVG  V  C +C  C   LE +C + +++
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWS 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           +N +  DG  T+GG++S +VV +++  KI        AAPLLCAG+TVY+P+    + Q 
Sbjct: 121 YNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAPLLCAGVTVYSPLSHFGLKQS 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           G   G++GLGG+GHM VK  KA G +VTV+S+S  K+EEAL  LGAD ++VSSD  +M+ 
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKFSPASLN----------I 289
              SLD+IIDT    HP + Y+SLLK+ G  +L+G   + ++F    L           I
Sbjct: 241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFI 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
           G  K+T+EMLE+C    +   IE + ++ VN A ERL K DV+YRFV+D+  S
Sbjct: 301 GSMKETEEMLEFCKEKGLTSMIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGS 353

Length = 357

>gnl|CDD|177834 PLN02178, PLN02178, cinnamyl-alcohol dehydrogenase

 Score =  357 bits (918), Expect = e-123
 Identities = 178/345 (51%), Positives = 231/345 (66%), Gaps = 12/345 (3%)

Query: 11  LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
            GWAA D SGVLSP+ F+RR  G +DV++ I  CGVC++D+   +N  G S+YP++PGHE
Sbjct: 8   FGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHE 67

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
           IVGI  +VG NV++FK GD VGVG  + SC+ CE CN  LE +C + V+T+N+  +DGT 
Sbjct: 68  IVGIATKVGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTR 127

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM-NQPGKSLGVIGL 189
            +GGYS  IVV  R+   I +  P    APLLCAGITVY+PM  + M  + GK LGV GL
Sbjct: 128 NQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL 187

Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           GGLGH+AVK GKAFGL VTV+S S+ K+ EA+  LGAD F+V++D ++MK    ++DFII
Sbjct: 188 GGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTMDFII 247

Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP-----------ASLNIGGTKDTQEM 298
           DT S +H      SLLKV+G  V +G P K    P               IGG K+TQEM
Sbjct: 248 DTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEM 307

Query: 299 LEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           LE+CA HKI   IE I + ++N A++RL K DV+YRFVID+ NSL
Sbjct: 308 LEFCAKHKIVSDIELIKMSDINSAMDRLAKSDVRYRFVIDVANSL 352

Length = 375

>gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only]

 Score =  329 bits (845), Expect = e-112
 Identities = 135/342 (39%), Positives = 175/342 (51%), Gaps = 24/342 (7%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
               +     L          G  +V I +  CGVC+ D+   +      K PL+PGHEI
Sbjct: 6   AAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEI 65

Query: 72  VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTIT 131
           VG V EVG  V+  KVGD VGVG  V SC +CEYC  G E  C     T       G  T
Sbjct: 66  VGTVVEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTT 118

Query: 132 KGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG 191
            GGY+ Y+VV  RY  KI     LA AAPLLCAGIT Y  + +    +PGK + V+G GG
Sbjct: 119 DGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGITTYRALKKAN-VKPGKWVAVVGAGG 177

Query: 192 LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT 251
           LGHMAV++ KA G  V  ++ S  K E A   LGAD  + SSD + ++A+ +  D IIDT
Sbjct: 178 LGHMAVQYAKAMGAEVIAITRSEEKLELAKK-LGADHVINSSDSDALEAVKEIADAIIDT 236

Query: 252 ASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASL----------NIGGTKDTQEM 298
             G    +  +  L+  G  VLVG P            L           +G   D +E 
Sbjct: 237 V-GPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEA 295

Query: 299 LEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339
           L++ A  KI P+I ETIP++ +NEA ER+ K  V+ R VID+
Sbjct: 296 LDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDM 337

Length = 339

>gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins

 Score =  317 bits (815), Expect = e-107
 Identities = 140/339 (41%), Positives = 180/339 (53%), Gaps = 23/339 (6%)

Query: 13  WAARDPS--GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
            AA   +  G L P        G  +V I I  CGVC+ D+       G SKYPLVPGHE
Sbjct: 1   KAAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHE 60

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
           IVG V EVG  V   KVGD VGVG  V SC  CEYC  GLE  C ++V T       G  
Sbjct: 61  IVGEVVEVGAGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNT-------GYT 113

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLG 190
           T+GGY+ Y+V    Y   + +  PLA AAPLLCAGITVY+  +R    +PG+ + V+G+G
Sbjct: 114 TQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA-LRDAGPRPGERVAVLGIG 172

Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250
           GLGH+AV++ +A G     ++ S  K+E A   LGAD+ V S      +A     D I+ 
Sbjct: 173 GLGHLAVQYARAMGFETVAITRSPDKRELARK-LGADEVVDSGAELDEQAAAGGADVILV 231

Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN------------IGGTKDTQEM 298
           T       +A +  L+  G  VLVG P    FSP                 GG  D QE 
Sbjct: 232 TVVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEA 291

Query: 299 LEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVI 337
           L++ A  K+ P IET P++  NEA ER+ K DV++RFV+
Sbjct: 292 LDFAAEGKVKPMIETFPLDQANEAYERMEKGDVRFRFVL 330

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330

>gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  227 bits (582), Expect = 2e-72
 Identities = 111/330 (33%), Positives = 159/330 (48%), Gaps = 36/330 (10%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           G  +V + +   GVC+ D+       GD     K PL+ GHE  G+V  VG  VS  KVG
Sbjct: 25  GPGEVLVKLEASGVCHTDL---HAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLKVG 81

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D VGV    ++C  CEYC  G E  C     +      DGT     ++ Y +   RY   
Sbjct: 82  DRVGVKWLYDACGKCEYCRTGDETLCPNQKNS--GYTVDGT-----FAEYAIADARYVTP 134

Query: 149 IANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNV 207
           I +      AAPLLCAG+TVY  + +  + +PG  + + G GG LGH+ V++ KA GL V
Sbjct: 135 IPDGLSFEQAAPLLCAGVTVYKALKKAGL-KPGDWVVISGAGGGLGHLGVQYAKAMGLRV 193

Query: 208 TVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKAL--GKSLDFIIDTASGDHPFDAYM 262
             +     K E A   LGAD FV    S D+E +K L  G     ++ TA     ++  +
Sbjct: 194 IAIDVGDEKLELAKE-LGADAFVDFKKSDDVEAVKELTGGGGAHAVVVTAVSAAAYEQAL 252

Query: 263 SLLKVAGVYVLVGFPSKVKFSPAS--------LNIGGT-----KDTQEMLEYCAAHKIYP 309
             L+  G  V VG P    F P          + I G+     +D QE LE+ A  K+ P
Sbjct: 253 DYLRPGGTLVCVGLPPG-GFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVKP 311

Query: 310 QIETIPIENVNEALERLIKRDVKYRFVIDI 339
            I+ +P+E++NE  E++ +  +  R V+D 
Sbjct: 312 HIQVVPLEDLNEVFEKMEEGKIAGRVVVDF 341

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|176256 cd08296, CAD_like, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  213 bits (545), Expect = 6e-67
 Identities = 105/319 (32%), Positives = 158/319 (49%), Gaps = 24/319 (7%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           G  +V I +  CGVC++D            YP VPGHE+VG +  VG  VSR+KVGD VG
Sbjct: 24  GPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDRVG 83

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAND 152
           VG +   C  C+ C  G  VHC     T       G    GGY+ Y++       +I +D
Sbjct: 84  VGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDD 136

Query: 153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST 212
              A AAPLLCAG+T +   +R+   +PG  + V G+GGLGH+AV++    G     +S 
Sbjct: 137 LDAAEAAPLLCAGVTTFNA-LRNSGAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISR 195

Query: 213 STSKKEEALSLLGADKFVVSSDLEQMKALGKSL---DFIIDTASGDHPFDAYMSLLKVAG 269
            + K + A   LGA  ++ +S  +  +AL + L     I+ TA       A +  L   G
Sbjct: 196 GSDKADLARK-LGAHHYIDTSKEDVAEAL-QELGGAKLILATAPNAKAISALVGGLAPRG 253

Query: 270 VYVLVG-FPSKVKFSPASLNIGG----------TKDTQEMLEYCAAHKIYPQIETIPIEN 318
             +++G     V  SP  L +G             D+++ L++ A H + P +ET P+E 
Sbjct: 254 KLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETFPLEK 313

Query: 319 VNEALERLIKRDVKYRFVI 337
            NEA +R++    ++R V+
Sbjct: 314 ANEAYDRMMSGKARFRVVL 332

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADHs), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 333

>gnl|CDD|176258 cd08298, CAD2, Cinnamyl alcohol dehydrogenases (CAD)

 Score =  204 bits (522), Expect = 1e-63
 Identities = 110/322 (34%), Positives = 155/322 (48%), Gaps = 37/322 (11%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKH---GD---SKYPLVPGHEIVGIVKEVGHNVSRFK 86
           G  +V I +  CGVC  D+      H   GD    K PL+PGHEIVG V+ VG  V+RF 
Sbjct: 28  GPGEVLIKVEACGVCRTDL------HIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFS 81

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
           VGD VGV    ++C +C YC  G E  C  + +T   +D       GGY+ Y+V  ER+ 
Sbjct: 82  VGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVD-------GGYAEYMVADERFA 134

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
           Y I  DY    AAPLLCAGI  Y  +      +PG+ LG+ G G   H+A++  +  G  
Sbjct: 135 YPIPEDYDDEEAAPLLCAGIIGYRALKLAG-LKPGQRLGLYGFGASAHLALQIARYQGAE 193

Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLK 266
           V   + S   +E A   LGAD +   SD        + LD  I  A       A +  +K
Sbjct: 194 VFAFTRSGEHQELARE-LGAD-WAGDSDDL----PPEPLDAAIIFAPVGALVPAALRAVK 247

Query: 267 VAGVYVLVG--------FPSKVKF---SPASLNIGGTKDTQEMLEYCAAHKIYPQIETIP 315
             G  VL G        F  ++ +   +  S+     +D +E L+  A   I P++ET P
Sbjct: 248 KGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYP 307

Query: 316 IENVNEALERLIKRDVKYRFVI 337
           +E  NEAL+ L +  ++   V+
Sbjct: 308 LEEANEALQDLKEGRIRGAAVL 329

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 329

>gnl|CDD|176187 cd05284, arabinose_DH_like, D-arabinose dehydrogenase

 Score =  176 bits (449), Expect = 1e-52
 Identities = 103/327 (31%), Positives = 153/327 (46%), Gaps = 32/327 (9%)

Query: 32  VGSDDVSITITHCGVCYADV-IW--TRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
            G   V + +   GVC++D+ +           K P   GHE  G V+EVG  V   K G
Sbjct: 23  PGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKEG 82

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D V V      C  C YC  G E +C  +   F  I  D     GG++ Y++V  R   K
Sbjct: 83  DPVVVHPPW-GCGTCRYCRRGEENYCENA--RFPGIGTD-----GGFAEYLLVPSRRLVK 134

Query: 149 IANDYPLALAAPLLCAGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNV 207
           +        AAPL  AG+T Y  + +      PG ++ VIG+GGLGH+AV+  +A     
Sbjct: 135 LPRGLDPVEAAPLADAGLTAYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALT-PA 193

Query: 208 TVLSTSTSKKEEALSL---LGADKFVVSSD--LEQMKAL--GKSLDFIIDTASGDHPFDA 260
           TV++   S  EEAL L   LGAD  + +SD  +E+++ L  G+  D +ID    D     
Sbjct: 194 TVIAVDRS--EEALKLAERLGADHVLNASDDVVEEVRELTGGRGADAVIDFVGSDETLAL 251

Query: 261 YMSLLKVAGVYVLVGFPSKV-----KFSPASLNIGGT-----KDTQEMLEYCAAHKIYPQ 310
              LL   G YV+VG+            P  +++ G+      +  E++    + K+  +
Sbjct: 252 AAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVE 311

Query: 311 IETIPIENVNEALERLIKRDVKYRFVI 337
           I   P+E+ NEAL+RL +  V  R V+
Sbjct: 312 ITKFPLEDANEALDRLREGRVTGRAVL 338

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 340

>gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

 Score =  170 bits (434), Expect = 2e-50
 Identities = 109/322 (33%), Positives = 149/322 (46%), Gaps = 25/322 (7%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G  +V + +   GVC++D+ I        +K PL  GHEI G V EVG  V+ FKVGD V
Sbjct: 25  GPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRV 84

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
            V   V  C  C  C  G    C         ID       GG++ YIVV  R    + +
Sbjct: 85  AV-PAVIPCGACALCRRGRGNLCLNQGMPGLGID-------GGFAEYIVVPARALVPVPD 136

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
             P A AA    A +T Y  ++R    +PG+++ VIGLGGLG  AV+  KA G  V  + 
Sbjct: 137 GVPFAQAAVATDAVLTPYHAVVRAGEVKPGETVLVIGLGGLGLNAVQIAKAMGAAVIAVD 196

Query: 212 TSTSKKEEALSLLGADKFV----VSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
               K E A   LGAD+ +     S   ++   LG   D I D       F+     +K 
Sbjct: 197 IKEEKLELAKE-LGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQPTFEDAQKAVKP 255

Query: 268 AGVYVLVGF-PSKVKFSPASL---------NIGGTKDTQ-EMLEYCAAHKIYPQIETIPI 316
            G  V+VG    K+    + L         + GGT +   E+L+  A  K+ PQ+ET P+
Sbjct: 256 GGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVETRPL 315

Query: 317 ENVNEALERLIKRDVKYRFVID 338
           + + E LERL K  VK R V+ 
Sbjct: 316 DEIPEVLERLHKGKVKGRVVLV 337

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338

>gnl|CDD|176202 cd08240, 6_hydroxyhexanoate_dh_like, 6-hydroxyhexanoate dehydrogenase

 Score =  164 bits (417), Expect = 9e-48
 Identities = 105/333 (31%), Positives = 154/333 (46%), Gaps = 40/333 (12%)

Query: 35  DDVSITITHCGVCYADV-IW-------TRNKHGDS----KYPLVPGHEIVGIVKEVGHNV 82
            +V + +T CGVC++D+ IW                   K PLV GHEIVG V  VG + 
Sbjct: 26  TEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAVGPDA 85

Query: 83  SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV- 141
           +  KVGD V V  ++  C +C  C  G E  CA+         A G    GGY+ Y++V 
Sbjct: 86  ADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGR-------ALGIFQDGGYAEYVIVP 137

Query: 142 HERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGK 201
           H RY          ALAA L C+G+T Y+ + +       + + +IG GGLG MA+   K
Sbjct: 138 HSRYLVDPGG-LDPALAATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLK 196

Query: 202 AFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ----MKALGKSLDFIIDTASGDH 256
           A G  N+ V+    +K E A +  GAD  V  SD +     +KA G  +D +ID  +   
Sbjct: 197 ALGPANIIVVDIDEAKLEAAKA-AGADVVVNGSDPDAAKRIIKAAGGGVDAVIDFVNNSA 255

Query: 257 PFDAYMSLLKVAGVYVLVG-FPSKVKFSPA-----SLNIGGT-----KDTQEMLEYCAAH 305
                  +L   G  VLVG F  +           +L I G+     ++ +E++    A 
Sbjct: 256 TASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALAKAG 315

Query: 306 KIYP-QIETIPIENVNEALERLIKRDVKYRFVI 337
           K+ P  +   P+ +VN+AL+ L    V  R V+
Sbjct: 316 KLKPIPLTERPLSDVNDALDDLKAGKVVGRAVL 348

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 350

>gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  161 bits (410), Expect = 1e-47
 Identities = 73/249 (29%), Positives = 103/249 (41%), Gaps = 18/249 (7%)

Query: 36  DVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           +V + +   G+C  D+ I         K PL+ GHE  G+V EVG  V+  KVGD V V 
Sbjct: 1   EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVL 60

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
             +  C  CE C +                        GG++ Y+VV       + +   
Sbjct: 61  PNL-GCGTCELCRELCPGGGILGEGLD-----------GGFAEYVVVPADNLVPLPDGLS 108

Query: 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
           L  AA L     T Y  + R  + +PG ++ V+G GG+G +A +  KA G  V V   S 
Sbjct: 109 LEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGLLAAQLAKAAGARVIVTDRSD 168

Query: 215 SKKEEALSLLGADKFVVSSD----LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGV 270
            K E A   LGAD  +   +     E     G   D +ID   G       + LL+  G 
Sbjct: 169 EKLELAKE-LGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR 227

Query: 271 YVLVGFPSK 279
            V+VG  S 
Sbjct: 228 IVVVGGTSG 236

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271

>gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family

 Score =  156 bits (397), Expect = 5e-45
 Identities = 105/323 (32%), Positives = 147/323 (45%), Gaps = 27/323 (8%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
             G  +V I +   GVCY D+++ +      KYPL+ GHEIVG V+EVG  V RFK GD 
Sbjct: 22  EPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDR 81

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHC-ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
           V +  Y+  C  CEYC  G E  C  R+ Y        G    GG++ Y+ V ER   K+
Sbjct: 82  VILYYYI-PCGKCEYCLSGEENLCRNRAEY--------GEEVDGGFAEYVKVPERSLVKL 132

Query: 150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
            ++     AA   C   T    + R  + +    L     GG+G  A++  KA G  V  
Sbjct: 133 PDNVSDESAALAACVVGTAVHALKRAGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIA 192

Query: 210 LSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVA 268
           ++ S  K +  L  LGAD  +  S   E +K LG   D +I+   G    +  +  L   
Sbjct: 193 VTRSPEKLKI-LKELGADYVIDGSKFSEDVKKLG-GADVVIELV-GSPTIEESLRSLNKG 249

Query: 269 GVYVLVGF--PSKVKFSPASL---------NIGGTK-DTQEMLEYCAAHKIYPQIE-TIP 315
           G  VL+G   P      P  L         +I  TK D +E L+     KI P I+  + 
Sbjct: 250 GRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVS 309

Query: 316 IENVNEALERLIKRDVKYRFVID 338
           +E++NEALE L    V  R V+ 
Sbjct: 310 LEDINEALEDLKSGKVVGRIVLK 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332

>gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

 Score =  133 bits (336), Expect = 6e-36
 Identities = 83/337 (24%), Positives = 128/337 (37%), Gaps = 51/337 (15%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
            + +V + IT  GVC+ D   T +      +P V GHE  GIV+ VG  V+  K GDHV 
Sbjct: 26  RAGEVLVRITATGVCHTDAH-TLSGDDPEGFPAVLGHEGAGIVEAVGEGVTSVKPGDHV- 83

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA----DGTIT-------------KGGY 135
           +  +   C  C++C  G    C                DGT                  +
Sbjct: 84  ILLFTPECGQCKFCLSGKPNLC---EAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTF 140

Query: 136 SSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
           + Y VVHE    KI  D PL  A  L C   T    ++     +PG ++ V GLGG+G  
Sbjct: 141 AEYTVVHEISLVKIDPDAPLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLA 200

Query: 196 AVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSD-------LEQMKALGKSLDF 247
           A++  KA G   +  +  +  K E A    GA  FV   +       + ++   G   D+
Sbjct: 201 AIQGAKAAGAGRIIAVDINPEKLELAKK-FGATHFVNPKEVDDVVEAIVELTDGG--ADY 257

Query: 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIG------------GT 292
             +           +      G  V++G      ++   P  L  G              
Sbjct: 258 AFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR 317

Query: 293 KDTQEMLEYCAAHKIYPQ---IETIPIENVNEALERL 326
            D   +++   A K+        TIP+E++NEA + +
Sbjct: 318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLM 354

Length = 366

>gnl|CDD|181842 PRK09422, PRK09422, ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

 Score =  129 bits (327), Expect = 7e-35
 Identities = 92/331 (27%), Positives = 153/331 (46%), Gaps = 38/331 (11%)

Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
           R +   +  + + +CGVC+ D+      +GD   K   + GHE +GIVKEVG  V+  KV
Sbjct: 21  RPLKHGEALVKMEYCGVCHTDL---HVANGDFGDKTGRILGHEGIGIVKEVGPGVTSLKV 77

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           GD V +  +   C  CEYC  G E  C RSV   NA    G    GG +   +V   Y  
Sbjct: 78  GDRVSIAWFFEGCGHCEYCTTGRETLC-RSVK--NA----GYTVDGGMAEQCIVTADYAV 130

Query: 148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGK-AFGLN 206
           K+      A A+ + CAG+T Y  +    + +PG+ + + G GGLG++A+++ K  F   
Sbjct: 131 KVPEGLDPAQASSITCAGVTTYKAIKVSGI-KPGQWIAIYGAGGLGNLALQYAKNVFNAK 189

Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSSDLE----QMKALGKSLDFIIDTASGDHPFDAYM 262
           V  +  +  K   A   +GAD  + S  +E     ++         + TA     F+  +
Sbjct: 190 VIAVDINDDKLALAKE-VGADLTINSKRVEDVAKIIQEKTGGAHAAVVTAVAKAAFNQAV 248

Query: 263 SLLKVAGVYVLVGFPSKVKFSPASLNI---------------GGTKDTQEMLEYCAAHKI 307
             ++  G  V VG P +       L+I               G  +D +E  ++ A  K+
Sbjct: 249 DAVRAGGRVVAVGLPPES----MDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKV 304

Query: 308 YPQIETIPIENVNEALERLIKRDVKYRFVID 338
            P+++  P+E++N+  + + +  ++ R VID
Sbjct: 305 VPKVQLRPLEDINDIFDEMEQGKIQGRMVID 335

Length = 338

>gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional

 Score =  127 bits (320), Expect = 6e-34
 Identities = 92/326 (28%), Positives = 148/326 (45%), Gaps = 35/326 (10%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           G D+V I + + G+CY D++  +  +   KYP++ GHE+VG V+EVG NV  FK GD V 
Sbjct: 24  GKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRVA 83

Query: 93  VGTYVNSCRDCEYCNDGLEVHC-ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
              Y      CEYC  G E +C  R  Y        G    G ++ Y  V      K+  
Sbjct: 84  SLLYA-PDGTCEYCRSGEEAYCKNRLGY--------GEELDGFFAEYAKVKVTSLVKVPP 134

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL 210
           +     A  + C    VY  + R  + + G+++ V G  GG+G  A++  KA G  V  +
Sbjct: 135 NVSDEGAVIVPCVTGMVYRGLRRAGV-KKGETVLVTGAGGGVGIHAIQVAKALGAKVIAV 193

Query: 211 STSTSKKEEALSLLG--ADKFVVSSDL-EQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
           ++S SK +    ++   AD  +V S   E++K +G   D +I+T  G    +  +  L +
Sbjct: 194 TSSESKAK----IVSKYADYVIVGSKFSEEVKKIG-GADIVIETV-GTPTLEESLRSLNM 247

Query: 268 AGVYVLVGF--PSKVKFSPASL----------NIGGTK-DTQEMLEYCAAHKIYPQI-ET 313
            G  + +G   PS                   +I  TK D +E L+  A  KI P I   
Sbjct: 248 GGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAE 307

Query: 314 IPIENVNEALERLIKRDVKYRFVIDI 339
           + +  +++ALE L  +    + ++  
Sbjct: 308 VSLSEIDKALEELKDKSRIGKILVKP 333

Length = 334

>gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

 Score =  124 bits (313), Expect = 5e-33
 Identities = 72/319 (22%), Positives = 126/319 (39%), Gaps = 49/319 (15%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKY---PLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G  +V + +   GV   D+         +     PL+PGH++ G+V  VG  V+ FKVGD
Sbjct: 26  GPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGD 85

Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
                                       V+        G      Y+ Y+VV        
Sbjct: 86  E---------------------------VFGMTPFTRGGA-----YAEYVVVPADELALK 113

Query: 150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVT 208
             +     AA L  AG+T +  +      + G+++ + G  GG+G  AV+  KA G    
Sbjct: 114 PANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQLAKARGA--R 171

Query: 209 VLSTSTSKKEEALSLLGADKFVVSSD-LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
           V++T+++   + L  LGAD+ +  +    +  A    +D ++DT  G+      ++L+K 
Sbjct: 172 VIATASAANADFLRSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGGE-TLARSLALVKP 230

Query: 268 AGVYVLVGFPSKVKFSPASLNIGGT--------KDTQEMLEYCAAHKIYPQI-ETIPIEN 318
            G  V +  P   + +     +           +   E+ E   A K+ P +    P+E+
Sbjct: 231 GGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLED 290

Query: 319 VNEALERLIKRDVKYRFVI 337
             EA ERL     + + V+
Sbjct: 291 AAEAHERLESGHARGKVVL 309

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309

>gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

 Score =  122 bits (308), Expect = 3e-32
 Identities = 86/337 (25%), Positives = 130/337 (38%), Gaps = 61/337 (18%)

Query: 20  GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEV 78
            VL          G  +V + +   GV   DV+  +         P +PG E  G+V  V
Sbjct: 13  EVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAV 72

Query: 79  GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSY 138
           G  V+ FKVGD V     V   RD                              GGY+ Y
Sbjct: 73  GSGVTGFKVGDRVAALGGV--GRD------------------------------GGYAEY 100

Query: 139 IVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAV 197
           +VV   +   + +      AA L  AG+T +  +      +PG+++ V G  GG+G  A+
Sbjct: 101 VVVPADWLVPLPDGLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAI 160

Query: 198 KFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTA 252
           +  KA G  V V   S+S+K E L  LGAD  +   +   +EQ++ L  GK +D ++DT 
Sbjct: 161 QLAKALGATV-VAVVSSSEKLELLKELGADHVINYREEDFVEQVRELTGGKGVDVVLDTV 219

Query: 253 SGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLNIGG----------------TK 293
            G   F A ++ L   G  V +G  S    V  +   L                     +
Sbjct: 220 -GGDTFAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAE 278

Query: 294 DTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKR 329
              E+ +  A+ K+ P I    P+     A   L+  
Sbjct: 279 ALAELFDLLASGKLKPVIDRVYPLAEAPAAAAHLLLE 315

Length = 326

>gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

 Score =  122 bits (308), Expect = 5e-32
 Identities = 84/326 (25%), Positives = 122/326 (37%), Gaps = 33/326 (10%)

Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP-GHEIVGIVKEVGHNVSRFKVG 88
              G  DV I +T  G+C +D+   R          +  GHE VG V EVG  V  FKVG
Sbjct: 21  PIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVG 79

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D V V      C  C YC  G    C    +   A    G    GG++ Y+ V   +   
Sbjct: 80  DRV-VVEPNIPCGHCRYCRAGEYNLCENPGFYGYA--GLGGGIDGGFAEYVRVPADFNLA 136

Query: 149 IAND---YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL 205
              D      A     L      +         +PG ++ V+G G +G +A+   K  G 
Sbjct: 137 KLPDGIDEEAAALTEPLATAYHGH---AERAAVRPGGTVVVVGAGPIGLLAIALAKLLGA 193

Query: 206 -NVTVLSTSTSKKEEALSLLGADKFVVSS---DLEQMKAL--GKSLDFIIDTASGDHPFD 259
             V V+  S  + E A    GAD  V  S      ++  L  G+  D +I+        D
Sbjct: 194 SVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGADVVIEAVGSPPALD 253

Query: 260 AYMSLLKVAGVYVLVGFPSKVKFSP-------------ASLNIGGTKDTQEMLEYCAAHK 306
             +  L+  G  V+VG                       SL   G +D +  L+  A+ K
Sbjct: 254 QALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGK 313

Query: 307 I-YPQIET--IPIENVNEALERLIKR 329
           I   ++ T  +P+++  EA E    R
Sbjct: 314 IDPEKLITHRLPLDDAAEAYELFADR 339

Length = 350

>gnl|CDD|176240 cd08279, Zn_ADH_class_III, Class III alcohol dehydrogenase

 Score =  119 bits (302), Expect = 5e-31
 Identities = 78/284 (27%), Positives = 117/284 (41%), Gaps = 39/284 (13%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           G  +V + I   G+C++D+            P V GHE  G+V+EVG  V+  K GDHV 
Sbjct: 24  GPGEVLVRIAAAGLCHSDLHVVTGDLPAP-LPAVLGHEGAGVVEEVGPGVTGVKPGDHV- 81

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT--ITKGG-----------YSSYI 139
           V +++ +C  C YC+ G    C            DGT   T  G           ++ Y 
Sbjct: 82  VLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYT 141

Query: 140 VVHERYCYKIANDYPLALAAPLLCAGIT-----VYTPMMRHKMNQPGKSLGVIGLGGLGH 194
           VV E    KI +D PL  AA L C   T     V T  +R     PG ++ VIG GG+G 
Sbjct: 142 VVPEASVVKIDDDIPLDRAALLGCGVTTGVGAVVNTARVR-----PGDTVAVIGCGGVGL 196

Query: 195 MAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFI 248
            A++  +  G   +  +     K E A    GA   V +S+   +E ++ L  G+  D+ 
Sbjct: 197 NAIQGARIAGASRIIAVDPVPEKLELARR-FGATHTVNASEDDAVEAVRDLTDGRGADYA 255

Query: 249 IDTASGDHP--FDAYMSLLKVAGVYVLVGFP---SKVKFSPASL 287
            +             +++ +  G  V+VG       V      L
Sbjct: 256 FEAV--GRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALEL 297

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 363

>gnl|CDD|131869 TIGR02822, adh_fam_2, zinc-binding alcohol dehydrogenase family protein

 Score =  117 bits (294), Expect = 2e-30
 Identities = 71/218 (32%), Positives = 99/218 (45%), Gaps = 12/218 (5%)

Query: 13  WAARDPSGVLS-PYSFNRRAV---GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPG 68
           W    P  +   P  F  R V   G  ++ + +  CGVC  D+  +       +  + PG
Sbjct: 2   WEVERPGPIEDGPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPG 61

Query: 69  HEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADG 128
           HE+VG V   G +   F VGD VG+     +C  C YC  G E  C  S YT       G
Sbjct: 62  HEVVGEVAGRGADAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYT-------G 114

Query: 129 TITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG 188
             T GGY+ Y  V   + Y++   Y     APLLCAGI  Y  ++R  +  PG  LG+ G
Sbjct: 115 WDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLRASL-PPGGRLGLYG 173

Query: 189 LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA 226
            GG  H+  +   A G  V V++   + +  AL+L  A
Sbjct: 174 FGGSAHLTAQVALAQGATVHVMTRGAAARRLALALGAA 211

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized [Energy metabolism, Fermentation]. Length = 329

>gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR)

 Score =  115 bits (290), Expect = 1e-29
 Identities = 85/335 (25%), Positives = 134/335 (40%), Gaps = 70/335 (20%)

Query: 35  DDVSITITHCGVCYADVIWTRNKHGDS-KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93
            +V I +   GV + D++  + K+      P VPG E+ G+V+ VG  V+ FKVGD V  
Sbjct: 28  GEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVA 87

Query: 94  GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY 153
            T                                    +GG++  +VV     + + +  
Sbjct: 88  LT-----------------------------------GQGGFAEEVVVPAAAVFPLPDGL 112

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNV--TVL 210
               AA L     T Y  ++R    QPG+++ V+G  GG+G  AV+  KA G  V     
Sbjct: 113 SFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAA- 171

Query: 211 STSTSKKEEALSLLGADKFVVSSDL---EQMKAL--GKSLDFIIDTASGDHPFDAYMSLL 265
             S+ +K      LGAD  +   D    E++KAL  G+ +D + D   GD  F+A +  L
Sbjct: 172 --SSEEKLALARALGADHVIDYRDPDLRERVKALTGGRGVDVVYDPVGGDV-FEASLRSL 228

Query: 266 KVAGVYVLVGFPS----KVK--------FSPASLNIGGT---------KDTQEMLEYCAA 304
              G  +++GF S    ++          S   +  G            +  E+ +  A 
Sbjct: 229 AWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAE 288

Query: 305 HKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID 338
            KI P +    P+E   EAL  L  R    + V+ 
Sbjct: 289 GKIRPHVSAVFPLEQAAEALRALADRKATGKVVLT 323

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|219758 pfam08240, ADH_N, Alcohol dehydrogenase GroES-like domain

 Score =  108 bits (271), Expect = 3e-29
 Identities = 37/115 (32%), Positives = 55/115 (47%), Gaps = 8/115 (6%)

Query: 35  DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
            +V + +   G+C +D+   R +    K PL+ GHE  GIV+EVG  V+  KVGD V V 
Sbjct: 2   GEVLVRVKAAGICGSDLHIYRGEPPPVKLPLILGHEGAGIVEEVGPGVTGLKVGDRVVVY 61

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
             +  C  C  C +G E  C    +    +D       GG++ Y+VV  R    +
Sbjct: 62  PLI-PCGKCAACREGRENLCPNGKFLGVHLD-------GGFAEYVVVPARNLVPL 108

This is the catalytic domain of alcohol dehydrogenases. Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure. Length = 108

>gnl|CDD|176221 cd08260, Zn_ADH6, Alcohol dehydrogenases of the MDR family

 Score =  114 bits (288), Expect = 3e-29
 Identities = 90/326 (27%), Positives = 131/326 (40%), Gaps = 45/326 (13%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHG------DSKYPLVPGHEIVGIVKEVGHNVSR 84
               D V + +  CGVC +D  W    HG      D   P VPGHE  G+V EVG +VSR
Sbjct: 22  EPPPDGVVVEVEACGVCRSD--W----HGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSR 75

Query: 85  FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVH-- 142
           ++VGD V V  +V  C  C YC  G    C   V         G    G ++ Y+ V   
Sbjct: 76  WRVGDRVTV-PFVLGCGTCPYCRAGDSNVCEHQV-------QPGFTHPGSFAEYVAVPRA 127

Query: 143 ERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA 202
           +    ++ +D     AA L C   T +  ++     +PG+ + V G GG+G  AV    A
Sbjct: 128 DVNLVRLPDDVDFVTAAGLGCRFATAFRALVHQARVKPGEWVAVHGCGGVGLSAVMIASA 187

Query: 203 FGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHP 257
            G  V  +     K E A   LGA   V +S++E + A      G      +D       
Sbjct: 188 LGARVIAVDIDDDKLELARE-LGAVATVNASEVEDVAAAVRDLTGGGAHVSVDALGIPET 246

Query: 258 FDAYMSLLKVAGVYVLVGFPSKVKFSPA---------SLNIGGTK-----DTQEMLEYCA 303
               ++ L+  G +V VG     +   A          L I G+          ML   A
Sbjct: 247 CRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIA 306

Query: 304 AHKIYPQI---ETIPIENVNEALERL 326
           + K+ P+     TI ++   +AL  +
Sbjct: 307 SGKLDPEPLVGRTISLDEAPDALAAM 332

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 345

>gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family

 Score =  113 bits (286), Expect = 5e-29
 Identities = 92/316 (29%), Positives = 139/316 (43%), Gaps = 35/316 (11%)

Query: 27  FNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86
                 G  +V I +   GV   D     N       P +PG E  G+V+EVG +V   K
Sbjct: 19  VKDPKPGPGEVLIRVKMAGVNPVDY-NVINAVKVKPMPHIPGAEFAGVVEEVGDHVKGVK 77

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            GD V V   V     C+ C  G E+ C R+          G ++ GGY+ YIVV E+  
Sbjct: 78  KGDRVVVYNRV-FDGTCDMCLSGNEMLC-RNGGII------GVVSNGGYAEYIVVPEKNL 129

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGL 205
           +KI +     LAA L  A +T Y   ++     PG+++ V G  G  G  AV+  K  G 
Sbjct: 130 FKIPDSISDELAASLPVAALTAYH-ALKTAGLGPGETVVVFGASGNTGIFAVQLAKMMGA 188

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKALGKSLDFIIDTASGDHPFDAYMS 263
            V  +S     +++ L   GAD  VV  D   E++K + K  D +I++  G   +D  +S
Sbjct: 189 EVIAVS-----RKDWLKEFGAD-EVVDYDEVEEKVKEITKMADVVINSL-GSSFWDLSLS 241

Query: 264 LLKVAGVYVLVGF--PSKVKFSPASL---------NIGGT-KDTQEMLEYCAAHKIYPQI 311
           +L   G  V  G     +VK   + L         + GGT K+  E+++      +  ++
Sbjct: 242 VLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIA--KDLKVKV 299

Query: 312 E-TIPIENVNEALERL 326
             T  +E   EAL+ L
Sbjct: 300 WKTFKLEEAKEALKEL 315

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase

 Score =  113 bits (286), Expect = 6e-29
 Identities = 78/238 (32%), Positives = 108/238 (45%), Gaps = 35/238 (14%)

Query: 30  RAVGSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFK 86
              G D+V I +  CG+C  D+ I+     G+  +  PLVPGHE  G+V  VG  V+ FK
Sbjct: 20  PEPGPDEVLIKVAACGICGTDLHIY----EGEFGAAPPLVPGHEFAGVVVAVGSKVTGFK 75

Query: 87  VGDHVGVGTYVN-SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY 145
           VGD V V    N  C +C YC  G    C        A+   G    GG++ Y+VV  + 
Sbjct: 76  VGDRVAVD--PNIYCGECFYCRRGRPNLCEN----LTAV---GVTRNGGFAEYVVVPAKQ 126

Query: 146 CYKIANDYPLALAA---PLLCA--GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
            YKI ++     AA   PL CA  G+ +          +PG S+ V G G +G +  +  
Sbjct: 127 VYKIPDNLSFEEAALAEPLSCAVHGLDLLGI-------KPGDSVLVFGAGPIGLLLAQLL 179

Query: 201 KAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS---DLEQMKALGKSLDFIIDTASG 254
           K  G   VTV   +  K E A   LGA + V  S      Q +      D +I+ A+G
Sbjct: 180 KLNGASRVTVAEPNEEKLELAKK-LGATETVDPSREDPEAQKEDNPYGFDVVIE-ATG 235

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334

>gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases

 Score =  113 bits (285), Expect = 8e-29
 Identities = 73/256 (28%), Positives = 108/256 (42%), Gaps = 25/256 (9%)

Query: 32  VGSDDVSITITHCGVCYADVIWTR-NKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
            G  +V + +  CG+C +D+   R    G    PLV GHE  G V+EVG  V    VGD 
Sbjct: 22  PGPGEVLVKVKACGICGSDI--PRYLGTGAYHPPLVLGHEFSGTVEEVGSGVDDLAVGDR 79

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCA-RSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
           V V   +  C  CEYC  G    C+             G+   G ++ Y+ V  R   KI
Sbjct: 80  VAVNPLL-PCGKCEYCKKGEYSLCSNYDYI--------GSRRDGAFAEYVSVPARNLIKI 130

Query: 150 ANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
            +      AA   P   A   V     R      G ++ VIG G +G +A+++ K  G  
Sbjct: 131 PDHVDYEEAAMIEPAAVALHAV-----RLAGITLGDTVVVIGAGTIGLLAIQWLKILGAK 185

Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSS--DLEQMKAL--GKSLDFIIDTASGDHPFDAYM 262
             +      +K      LGAD  +     D+E+++ L  G+  D +I+ A      +  +
Sbjct: 186 RVIAVDIDDEKLAVARELGADDTINPKEEDVEKVRELTEGRGADLVIEAAGSPATIEQAL 245

Query: 263 SLLKVAGVYVLVGFPS 278
           +L +  G  VLVG P 
Sbjct: 246 ALARPGGKVVLVGIPY 261

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343

>gnl|CDD|176241 cd08281, liver_ADH_like1, Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

 Score =  113 bits (284), Expect = 2e-28
 Identities = 85/294 (28%), Positives = 127/294 (43%), Gaps = 43/294 (14%)

Query: 19  SGVLSPYSFNR---------RAVGSDDVSITITHCGVCYAD--VIWTRNKHGDSKYPLVP 67
           +G  +PY+ +R            G  +V + I   G+C++D  VI   N       P+  
Sbjct: 9   TGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVI---NGDRPRPLPMAL 65

Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD 127
           GHE  G+V EVG  V+  +VGDHV V  +V SC  C  C +G    C        A +  
Sbjct: 66  GHEAAGVVVEVGEGVTDLEVGDHV-VLVFVPSCGHCRPCAEGRPALCEPGA----AANGA 120

Query: 128 GTITKGG------------------YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY 169
           GT+  GG                  ++ Y VV  R   KI  D PL +AA   CA +T  
Sbjct: 121 GTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVVKIDKDVPLEIAALFGCAVLTGV 180

Query: 170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADK 228
             ++     +PG+S+ V+GLGG+G  A+    A G + V  +  +  K   A   LGA  
Sbjct: 181 GAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALARE-LGATA 239

Query: 229 FVVSSD---LEQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS 278
            V + D   +EQ++ L G  +D+  + A      +    + +  G  V  G P 
Sbjct: 240 TVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPD 293

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to the corresponding carboxylic acid and alcohol. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 371

>gnl|CDD|176239 cd08278, benzyl_alcohol_DH, Benzyl alcohol dehydrogenase

 Score =  112 bits (284), Expect = 2e-28
 Identities = 84/298 (28%), Positives = 128/298 (42%), Gaps = 52/298 (17%)

Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
                D+V + I   G+C+ D++  R+    +  P V GHE  G+V+ VG  V+  K GD
Sbjct: 23  DDPRPDEVLVRIVATGICHTDLV-VRDGGLPTPLPAVLGHEGAGVVEAVGSAVTGLKPGD 81

Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSV-YTFNAIDADGT--ITKGG------------ 134
           HV V ++  SC +C  C  G   +C       F+    DG+  ++               
Sbjct: 82  HV-VLSF-ASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQS 139

Query: 135 -YSSYIVVHERYCYKIANDYPLALAAPLLC-----AGITVYTPMMRHKMN----QPGKSL 184
            +++Y VVHER   K+  D PL L APL C     AG  V        +N    +PG S+
Sbjct: 140 SFATYAVVHERNVVKVDKDVPLELLAPLGCGIQTGAG-AV--------LNVLKPRPGSSI 190

Query: 185 GVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKA 240
            V G G +G  AV   K  G   +  +    S+ E A   LGA   +   +   +  ++ 
Sbjct: 191 AVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELAKE-LGATHVINPKEEDLVAAIRE 249

Query: 241 L-GKSLDFIIDTASGDHPF---DAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGG 291
           + G  +D+ +DT +G  P     A  + L   G   LVG P   ++V      L + G
Sbjct: 250 ITGGGVDYALDT-TG-VPAVIEQAVDA-LAPRGTLALVGAPPPGAEVTLDVNDLLVSG 304

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 365

>gnl|CDD|176219 cd08258, Zn_ADH4, Alcohol dehydrogenases of the MDR family

 Score =  110 bits (277), Expect = 6e-28
 Identities = 74/263 (28%), Positives = 112/263 (42%), Gaps = 25/263 (9%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
            G  +V I +   G+C +D+   +  +   + P+V GHE  G + EVG +V  +KVGD V
Sbjct: 24  PGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDRV 83

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
              T  ++C  C YC  G    C             GT   GG++ Y++V E   +++  
Sbjct: 84  VSETTFSTCGRCPYCRRGDYNLCPHRK-------GIGTQADGGFAEYVLVPEESLHELPE 136

Query: 152 DYPL---ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
           +  L   AL  PL  A       +      +PG ++ V G G +G +A +  K  G  V 
Sbjct: 137 NLSLEAAALTEPLAVA----VHAVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVV 192

Query: 209 VLSTSTSKKEEALSL---LGADKFVVS----SDLEQMKALGKSLDFIIDTASGDHP-FDA 260
           V    T K E  L +   LGAD         ++L      G   D +I+  SG  P  + 
Sbjct: 193 V--VGTEKDEVRLDVAKELGADAVNGGEEDLAELVNEITDGDGADVVIE-CSGAVPALEQ 249

Query: 261 YMSLLKVAGVYVLVGFPSKVKFS 283
            + LL+  G  V VG    +  S
Sbjct: 250 ALELLRKGGRIVQVGIFGPLAAS 272

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 306

>gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family

 Score =  110 bits (278), Expect = 1e-27
 Identities = 92/352 (26%), Positives = 150/352 (42%), Gaps = 54/352 (15%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKH---GDSKYP--LVPGHEIVGIVKEVGHNV---SR 84
              ++ I +  CGVC++D+      H   G+  +P   V GHEI G V EVG NV     
Sbjct: 24  KEGEILIRVAACGVCHSDL------HVLKGELPFPPPFVLGHEISGEVVEVGPNVENPYG 77

Query: 85  FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA---DGTI----------- 130
             VGD V VG+++  C  C YC  G E  C    + +N +     DGT            
Sbjct: 78  LSVGDRV-VGSFIMPCGKCRYCARGKENLCED-FFAYNRLKGTLYDGTTRLFRLDGGPVY 135

Query: 131 --TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG 188
             + GG + Y VV       +        +A L CAG T Y  +      +PG+++ VIG
Sbjct: 136 MYSMGGLAEYAVVPATALAPLPESLDYTESAVLGCAGFTAYGALKHAADVRPGETVAVIG 195

Query: 189 LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GK 243
           +GG+G  A++  KAFG +  +      +K      LGA   V ++  + + A+     G+
Sbjct: 196 VGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAKELGATHTVNAAKEDAVAAIREITGGR 255

Query: 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGGTK------- 293
            +D +++       F   + +++  G  V+VG     +  +     L   G K       
Sbjct: 256 GVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGA 315

Query: 294 ----DTQEMLEYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID 338
               D  E++   A+ K+ P+        +E +NEA E L K  +  R +++
Sbjct: 316 RPRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367

>gnl|CDD|176201 cd08239, THR_DH_like, L-threonine dehydrogenase (TDH)-like

 Score =  109 bits (275), Expect = 2e-27
 Identities = 70/262 (26%), Positives = 119/262 (45%), Gaps = 21/262 (8%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G  +V + +   G+C +D+  +       +   ++PGHE  G+V  VG  V+ F+VGD V
Sbjct: 23  GPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGDRV 82

Query: 92  GVGTYVNSCRDCEYCNDGLEVHC--ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
            V  YV  C  C  C  G    C   R+ Y +N          GG++ Y++V E+    +
Sbjct: 83  MVYHYV-GCGACRNCRRGWMQLCTSKRAAYGWNR--------DGGHAEYMLVPEKTLIPL 133

Query: 150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVT 208
            +D   A  A LLC   T Y  + R  ++    ++ V+G G +G  A+   +A G  +V 
Sbjct: 134 PDDLSFADGALLLCGIGTAYHALRRVGVS-GRDTVLVVGAGPVGLGALMLARALGAEDVI 192

Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAYMS 263
            +  S  + E A + LGAD FV++S  + ++ +     G   D  I+ +         + 
Sbjct: 193 GVDPSPERLELAKA-LGAD-FVINSGQDDVQEIRELTSGAGADVAIECSGNTAARRLALE 250

Query: 264 LLKVAGVYVLVGFPSKVKFSPA 285
            ++  G  VLVG   ++    +
Sbjct: 251 AVRPWGRLVLVGEGGELTIEVS 272

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176195 cd08233, butanediol_DH_like, (2R,3R)-2,3-butanediol dehydrogenase

 Score =  109 bits (275), Expect = 3e-27
 Identities = 91/333 (27%), Positives = 141/333 (42%), Gaps = 48/333 (14%)

Query: 31  AVGSDDVSITITHCGVC------YAD---VIWTRNKHGDS--KYPLVPGHEIVGIVKEVG 79
            V   +V I +  CG+C      Y D    I T      +    P+  GHE  G+V EVG
Sbjct: 21  PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVG 80

Query: 80  HNVSRFKVGDHVGV-GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSY 138
             V+ FKVGD V V  T    C  C  C  GL   C      F  +   G    GG++ Y
Sbjct: 81  SGVTGFKVGDRVVVEPTI--KCGTCGACKRGLYNLCDS--LGFIGLGGGG----GGFAEY 132

Query: 139 IVVHERYCYKIANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
           +VV   + +K+ ++ PL  AA   PL      V    +R    +PG +  V+G G +G +
Sbjct: 133 VVVPAYHVHKLPDNVPLEEAALVEPL-----AVAWHAVRRSGFKPGDTALVLGAGPIGLL 187

Query: 196 AVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKAL--GKSLDFIID 250
            +   KA G   + V   S +++E A  L        +    + +++ L  G  +D   D
Sbjct: 188 TILALKAAGASKIIVSEPSEARRELAEELGATIVLDPTEVDVVAEVRKLTGGGGVDVSFD 247

Query: 251 TASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKFSPASL-----NIGGT-----KDTQEML 299
            A      D  +  L+  G  V V  +   + F+P  L      + G+     +D +E++
Sbjct: 248 CAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVI 307

Query: 300 EYCAAHKIYP-QIET--IPIEN-VNEALERLIK 328
           +  A+ KI    + T  IP+E+ V +  E LI 
Sbjct: 308 DLLASGKIDAEPLITSRIPLEDIVEKGFEELIN 340

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Length = 351

>gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score =  106 bits (267), Expect = 2e-26
 Identities = 83/290 (28%), Positives = 114/290 (39%), Gaps = 57/290 (19%)

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
            +P +PG +  G V  VG  V+RFKVGD V                             F
Sbjct: 57  PFPPIPGMDFAGEVVAVGSGVTRFKVGDEV-----------------------------F 87

Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG 181
             +   G    G  + Y+V  E    K         AA L  AG+T    +      +PG
Sbjct: 88  GRLPPKG---GGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVKPG 144

Query: 182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--VSSDLEQM 238
           + + + G  GG+G  AV+  KA G +VT    ST   E   S LGAD+ +   + D   +
Sbjct: 145 QRVLINGASGGVGTFAVQIAKALGAHVTG-VCSTRNAELVRS-LGADEVIDYTTEDFVAL 202

Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVA--GVYVLVGFPSKVKFS-----PASLNIGG 291
            A G+  D I D   G+ PF  Y + L +   G YV VG             P +L  GG
Sbjct: 203 TAGGEKYDVIFDAV-GNSPFSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGG 261

Query: 292 -------TKDTQEMLEYCA----AHKIYPQIETI-PIENVNEALERLIKR 329
                   K   E LE  A      K+ P I+++ P+E+  EA  RL   
Sbjct: 262 RRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSG 311

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176197 cd08235, iditol_2_DH_like, L-iditol 2-dehydrogenase

 Score =  106 bits (267), Expect = 3e-26
 Identities = 92/333 (27%), Positives = 136/333 (40%), Gaps = 56/333 (16%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
            G  +V + +  CG+C  DV   R  H D K P + GHEI G + EVG  V+ FKVGD V
Sbjct: 22  PGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRV 81

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC----- 146
            V      C +C YC  G E  C       N  D       GG++ Y+ V          
Sbjct: 82  FV-APHVPCGECHYCLRGNENMCPNYKKFGNLYD-------GGFAEYVRVPAWAVKRGGV 133

Query: 147 YKIANDYPLALAA---PLLC-------AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
            K+ ++     AA   PL C       AGI            +PG ++ VIG G +G + 
Sbjct: 134 LKLPDNVSFEEAALVEPLACCINAQRKAGI------------KPGDTVLVIGAGPIGLLH 181

Query: 197 VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDT 251
               KA G    ++S     + E    LGAD  + +++   +E+++ L  G+  D +I  
Sbjct: 182 AMLAKASGARKVIVSDLNEFRLEFAKKLGADYTIDAAEEDLVEKVRELTDGRGADVVIVA 241

Query: 252 ASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPA-----SLNIGGT-----KDTQEM 298
                     + L++  G  +  G   K   V   P       + I G+     +D +E 
Sbjct: 242 TGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEA 301

Query: 299 LEYCAAHKI--YPQI-ETIPIENVNEALERLIK 328
           LE  A+ KI     I    P+E++ EA E    
Sbjct: 302 LELIASGKIDVKDLITHRFPLEDIEEAFELAAD 334

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 343

>gnl|CDD|176238 cd08277, liver_alcohol_DH_like, Liver alcohol dehydrogenase

 Score =  106 bits (267), Expect = 4e-26
 Identities = 88/346 (25%), Positives = 137/346 (39%), Gaps = 48/346 (13%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
            +++V I +    VC+ D I        + +P++ GHE  GIV+ VG  V+  K GD V 
Sbjct: 26  KANEVRIKMLATSVCHTD-ILAIEGFKATLFPVILGHEGAGIVESVGEGVTNLKPGDKV- 83

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT--ITKGG-----------YSSYI 139
           +  ++  C +C  C  G    C +     + +  DGT   T  G           +S Y 
Sbjct: 84  IPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYT 143

Query: 140 VVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKF 199
           VV E Y  KI    PL     L C   T Y         +PG ++ V GLG +G  A+  
Sbjct: 144 VVDENYVAKIDPAAPLEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMG 203

Query: 200 GKAFGLN-VTVLSTSTSKKEEALSLLGADKFV--------VSSDLEQMKALGKSLDFIID 250
            K  G + +  +  +  K E+A    GA  F+        VS  + +M   G  +D+  +
Sbjct: 204 AKIAGASRIIGVDINEDKFEKA-KEFGATDFINPKDSDKPVSEVIREMTGGG--VDYSFE 260

Query: 251 TASGDHPF--DAYMSLLKVAGVYVLVGFPSKVKFSPASLNI-----------GGTK---D 294
             +G+     +A  S     GV V+VG P   + S     +           GG K   D
Sbjct: 261 -CTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFKSRSD 319

Query: 295 TQEMLEYCAAHKI---YPQIETIPIENVNEALERLIKRDVKYRFVI 337
             +++      K          +P E +N+  + L+K     R VI
Sbjct: 320 VPKLVSKYMNKKFDLDELITHVLPFEEINKGFD-LMKSGECIRTVI 364

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|176193 cd08231, MDR_TM0436_like, Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

 Score =  106 bits (266), Expect = 5e-26
 Identities = 90/328 (27%), Positives = 129/328 (39%), Gaps = 50/328 (15%)

Query: 39  ITITHCGVCYADV-IWTRNKHGDS---KYPLVPGHEIVGIVKEVG------HNVSRFKVG 88
           + +   GVC +DV        G       P++ GHE VG V  +G            KVG
Sbjct: 30  VRVRLAGVCGSDVHTV----AGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEPLKVG 85

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCA-RSVYTFNAIDADGTITKGGYSSYIVVH-ERYC 146
           D V   +    C  C  C  G    C  R  Y   A   D  ++ GGY+ +I +      
Sbjct: 86  DRV-TWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLS-GGYAEHIYLPPGTAI 143

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-L 205
            ++ ++ P  +AAP  CA  TV   + R      G ++ V G G LG  AV   K  G  
Sbjct: 144 VRVPDNVPDEVAAPANCALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGAR 203

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--------GKSLDFIIDTASGDHP 257
            V V+  S  + E A    GAD  +   +L   +          G+  D +I+ ASG HP
Sbjct: 204 RVIVIDGSPERLELARE-FGADATIDIDELPDPQRRAIVRDITGGRGADVVIE-ASG-HP 260

Query: 258 --FDAYMSLLKVAGVYVLVGF---PSKVKFSP-----ASLNIGGT-----KDTQEMLEYC 302
                 + LL+  G YVLVG       V   P      +L I G            + + 
Sbjct: 261 AAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRFL 320

Query: 303 AAHKI-YPQIETI----PIENVNEALER 325
              +  +P  E +    P+E++NEALE 
Sbjct: 321 ERTQDRFPFAELVTHRYPLEDINEALEL 348

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 361

>gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family

 Score =  101 bits (255), Expect = 1e-24
 Identities = 86/341 (25%), Positives = 136/341 (39%), Gaps = 56/341 (16%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRN-----KHGDSKYPLVPGHEIVGIVKEVGHNVSRFK 86
            G D+V + +    + + D +W R      K      P + G +  G+V+ VG  V+  K
Sbjct: 25  PGPDEVLVRVKAAALNHLD-LWVRRGMPGIKL---PLPHILGSDGAGVVEAVGPGVTNVK 80

Query: 87  VGDHVGVGTYVN-SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY 145
            G  V +  Y   SC  CEYC  G E  CA+           G    GGY+ Y+ V  R 
Sbjct: 81  PGQRVVI--YPGISCGRCEYCLAGRENLCAQYGIL-------GEHVDGGYAEYVAVPARN 131

Query: 146 CYKIANDYPLALAAPLLCAGITVYTP--MMRHKMN-QPGKSLGVIGLG-GLGHMAVKFGK 201
              I ++     AA    A +T  T   M+  +   +PG+++ V G G G+G  A++  K
Sbjct: 132 LLPIPDNLSFEEAA---AAPLTFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAK 188

Query: 202 AFGLNVTVLSTSTSKKEEALSLLGADKFV-------VSSDLEQMKALGKSLDFIIDTASG 254
            FG  V   + S  K E A   LGAD  +       V    E      + +D +++    
Sbjct: 189 LFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDFVREVRELTG--KRGVDVVVEHVGA 245

Query: 255 DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI--------------GGTKDT-QEML 299
              ++  +  L   G  V  G  +  +   A +++               GTK    E L
Sbjct: 246 AT-WEKSLKSLARGGRLVTCGATTGYE---APIDLRHVFWRQLSILGSTMGTKAELDEAL 301

Query: 300 EYCAAHKIYPQIETI-PIENVNEALERLIKRDVKYRFVIDI 339
                 K+ P I+++ P+E   EA  RL  R+   + V+  
Sbjct: 302 RLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342

>gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 98.9 bits (247), Expect = 1e-23
 Identities = 73/333 (21%), Positives = 117/333 (35%), Gaps = 78/333 (23%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
            + +V + +   GV +ADV   R  + D    P  PG+++VG V  +G  V+ F+VGD V
Sbjct: 26  AAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVGDRV 85

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                                  A +               GG + YI +  +Y   +  
Sbjct: 86  A----------------------ALTRV-------------GGNAEYINLDAKYLVPVPE 110

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL 210
               A A  L+   +T Y  + R      G+ + + G  GG+G   ++     G    V 
Sbjct: 111 GVDAAEAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGA--EVY 168

Query: 211 STSTSKKEEALSLLGADKFVVSSD--LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVA 268
            T++ +   AL  LGA      +   L  M   G  +D + D   G+  ++   + L   
Sbjct: 169 GTASERNHAALRELGATPIDYRTKDWLPAMLTPGG-VDVVFDGVGGES-YEESYAALAPG 226

Query: 269 GVYVLVGFPSKVKFSPASLNIGG----------------------------------TKD 294
           G  V  G  S +     SL   G                                   +D
Sbjct: 227 GTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQD 286

Query: 295 TQEMLEYCAAHKIYPQI-ETIPIENVNEALERL 326
             E+L+  A  KI P+I + +P+  V EA   L
Sbjct: 287 LTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLL 319

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331

>gnl|CDD|176182 cd05279, Zn_ADH1, Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

 Score = 99.1 bits (247), Expect = 2e-23
 Identities = 77/336 (22%), Positives = 127/336 (37%), Gaps = 41/336 (12%)

Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
               + +V I +   GVC+ D+    +    +  P++ GHE  GIV+ +G  V+  K GD
Sbjct: 21  APPKAGEVRIKVVATGVCHTDLH-VIDGKLPTPLPVILGHEGAGIVESIGPGVTTLKPGD 79

Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT---ITKG----------GY 135
            V +  +   C  C+ C +     C++S       + +DGT     KG           +
Sbjct: 80  KV-IPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTF 138

Query: 136 SSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
           + Y VV E    KI  D PL     + C   T Y   +      PG +  V GLGG+G  
Sbjct: 139 AEYTVVSEISLAKIDPDAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLS 198

Query: 196 AVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKAL----GKSLDFII 249
            +   KA G +  +       K E    LGA + +   D +   ++ L       +D+  
Sbjct: 199 VIMGCKAAGASRIIAVDINKDKFEKAKQLGATECINPRDQDKPIVEVLTEMTDGGVDYAF 258

Query: 250 DTA-SGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN------------IGGTKDTQ 296
           +   S D    A  +     G  V+VG P     +    N             GG K   
Sbjct: 259 EVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKD 318

Query: 297 EMLEYCAAHK-----IYPQI-ETIPIENVNEALERL 326
            + +  A ++     +   I   +P E +N+  + +
Sbjct: 319 SVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLM 354

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 365

>gnl|CDD|188504 TIGR03989, Rxyl_3153, oxidoreductase, Rxyl_3153 family

 Score = 93.1 bits (232), Expect = 2e-21
 Identities = 69/269 (25%), Positives = 114/269 (42%), Gaps = 33/269 (12%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
            + +V + +   G+C++D           +YP++ GHE  G+V +VG  V+  K GDHV 
Sbjct: 25  KAGEVLVKLVASGLCHSDEHLVTGDLPMPRYPILGGHEGAGVVTKVGPGVTGVKPGDHV- 83

Query: 93  VGTYVNSCRDCEYCNDGLEVHCAR------------SVYTFNAIDADGTITK--GGYSSY 138
           V +++ +C  C +C+ GL+  C                Y F+A   D       G +S Y
Sbjct: 84  VLSFIPACGRCRWCSTGLQNLCDLGAALLTGSQISDGTYRFHADGQDVGQMCLLGTFSEY 143

Query: 139 IVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVK 198
            VV E    KI +D PL  A  + C   T +   +     +PG ++ V+G+GG+G  AV+
Sbjct: 144 TVVPEASVVKIDDDIPLDKACLVGCGVPTGWGSAVNIADVRPGDTVVVMGIGGVGINAVQ 203

Query: 199 FGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF---------- 247
                G   V  +     K+E+AL   GA     S +    +A+    +           
Sbjct: 204 GAAVAGARKVIAVDPVEFKREQALK-FGATHAFASME----EAVQLVRELTNGQGADKTI 258

Query: 248 -IIDTASGDHPFDAYMSLLKVAGVYVLVG 275
             +    G+H     +S  +  G  V+ G
Sbjct: 259 ITVGEVDGEH-IAEALSATRKGGRVVVTG 286

This model describes a clade within the family pfam00107 of zinc-binding dehydrogenases. The family pfam00107 contains class III alcohol dehydrogenases, including enzymes designated S-(hydroxymethyl)glutathione dehydrogenase and NAD/mycothiol-dependent formaldehyde dehydrogenase. Members of the current family occur only in species that contain the very small protein mycofactocin (TIGR03969), a possible cofactor precursor, and radical SAM protein TIGR03962. We name this family for Rxyl_3153, where the lone member of the family co-clusters with these markers in Rubrobacter xylanophilus [Unknown function, Enzymes of unknown specificity]. Length = 369

>gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family

 Score = 90.7 bits (226), Expect = 1e-20
 Identities = 70/254 (27%), Positives = 110/254 (43%), Gaps = 23/254 (9%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS---KYPLVPGHEIVGIVKEVGHNVSRFK 86
             G+ +V + +   G+C +D+ I+    HG +    YP + GHE+ G V EVG  V+  K
Sbjct: 21  VPGAGEVLVRVKRVGICGSDLHIY----HGRNPFASYPRILGHELSGEVVEVGEGVAGLK 76

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
           VGD V V  Y+ SC +C  C  G   +C  ++         G    GG++ YIVV     
Sbjct: 77  VGDRVVVDPYI-SCGECYACRKGR-PNCCENLQVL------GVHRDGGFAEYIVVPAD-A 127

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
             +     L  AA  L   + +    +R      G ++ V+G G +G   ++  KA G  
Sbjct: 128 LLVPEGLSLDQAA--LVEPLAIGAHAVRRAGVTAGDTVLVVGAGPIGLGVIQVAKARGAR 185

Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKAL--GKSLDFIIDTASGDHPFDAYM 262
           V V+     + E A  L   D   V  +    +++ L  G+  D +ID        +  +
Sbjct: 186 VIVVDIDDERLEFARELGADDTINVGDEDVAARLRELTDGEGADVVIDATGNPASMEEAV 245

Query: 263 SLLKVAGVYVLVGF 276
            L+   G  VLVG 
Sbjct: 246 ELVAHGGRVVLVGL 259

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 67/255 (26%), Positives = 100/255 (39%), Gaps = 53/255 (20%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
            S +V + +  CG+ +AD++  R    DS  K P VPG E  G V+ VG  V  FKVGD 
Sbjct: 25  SSGEVRVRVEACGLNFADLM-ARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDR 83

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
           V   T                                     GGY+  + V     + + 
Sbjct: 84  VMGLTRF-----------------------------------GGYAEVVNVPADQVFPLP 108

Query: 151 NDYPLALAAPLLCAGITVYTPMMRHKMN--QPGKSLGV-IGLGGLGHMAVKFGKAFGLNV 207
           +      AA      +T Y      ++   +PG+S+ V    GG+G  A +  K    NV
Sbjct: 109 DGMSFEEAAAFPVNYLTAY--YALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVP-NV 165

Query: 208 TVLSTSTSKKEEALSLLGA----DKFVVSSDLEQ--MKALGKSLDFIIDTASGDHPFDAY 261
           TV+ T+++ K EAL   G     D      D  +   K   + +D ++D   G+    +Y
Sbjct: 166 TVVGTASASKHEALKENGVTHVIDYRT--QDYVEEVKKISPEGVDIVLDALGGEDTRKSY 223

Query: 262 MSLLKVAGVYVLVGF 276
             LLK  G  V+ G 
Sbjct: 224 -DLLKPMGRLVVYGA 237

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337

>gnl|CDD|176194 cd08232, idonate-5-DH, L-idonate 5-dehydrogenase

 Score = 83.4 bits (207), Expect = 4e-18
 Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 42/267 (15%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKV 87
             G  +V + +   G+C +D+  +     G    + P+V GHE+ G+V+ VG  V+    
Sbjct: 18  EPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAP 77

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           G  V V      C  C+YC  G    C  ++  F          +GG+  Y+VV    C 
Sbjct: 78  GQRVAVNPSR-PCGTCDYCRAGRPNLC-LNM-RFLGSAMRFPHVQGGFREYLVVDASQCV 134

Query: 148 KIANDYPLALAA---PLLCAGITVYTPMMRHKMNQ----PGKSLGVIGLGGLGHMAVKFG 200
            + +   L  AA   PL  A          H +N+     GK + V G G +G + V   
Sbjct: 135 PLPDGLSLRRAALAEPLAVA---------LHAVNRAGDLAGKRVLVTGAGPIGALVVAAA 185

Query: 201 KAFG---LNVTVLSTSTSKKEEALSL---LGADKFV-VSSDLEQMKALGKS-LDFIIDTA 252
           +  G   +  T L+      +  L++   +GAD+ V ++ D     A  K   D + + A
Sbjct: 186 RRAGAAEIVATDLA------DAPLAVARAMGADETVNLARDPLAAYAADKGDFDVVFE-A 238

Query: 253 SGDHPFDAYMSLLKVA---GVYVLVGF 276
           SG     A  S L+V    G  V VG 
Sbjct: 239 SGAPA--ALASALRVVRPGGTVVQVGM 263

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 339

>gnl|CDD|176260 cd08300, alcohol_DH_class_III, class III alcohol dehydrogenases

 Score = 83.8 bits (208), Expect = 5e-18
 Identities = 64/239 (26%), Positives = 97/239 (40%), Gaps = 22/239 (9%)

Query: 37  VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96
           V I I   GVC+ D         +  +P++ GHE  GIV+ VG  V+  K GDHV +  Y
Sbjct: 30  VRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGDHV-IPLY 88

Query: 97  VNSCRDCEYCNDGLEVHCAR-SVYTFNAIDADGT--ITKGG-----------YSSYIVVH 142
              C +C++C  G    C +        +  DGT   +  G           +S Y VV 
Sbjct: 89  TPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVA 148

Query: 143 ERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA 202
           E    KI  + PL     L C   T Y  ++     +PG ++ V GLG +G   ++  KA
Sbjct: 149 EISVAKINPEAPLDKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKA 208

Query: 203 FGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG--DHPFD 259
            G +  +       K E     GA   V   D ++          +++   G  D+ F+
Sbjct: 209 AGASRIIGIDINPDKFELAKKFGATDCVNPKDHDK-----PIQQVLVEMTDGGVDYTFE 262

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 368

>gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 83.4 bits (207), Expect = 5e-18
 Identities = 73/299 (24%), Positives = 122/299 (40%), Gaps = 36/299 (12%)

Query: 48  YADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYC 106
           Y D++    ++    K PL+P  +  G V  VG  V+RFKVGD V V T+  +  D    
Sbjct: 41  YRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRV-VPTFFPNWLDGPPT 99

Query: 107 NDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166
            +        S         DG + +     Y+V+ E    +  +      AA L CAG+
Sbjct: 100 AEDE-----ASAL---GGPIDGVLAE-----YVVLPEEGLVRAPDHLSFEEAATLPCAGL 146

Query: 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA 226
           T +  +      +PG ++ V G GG+   A++F KA G  V + ++S+ +K E    LGA
Sbjct: 147 TAWNALFGLGPLKPGDTVLVQGTGGVSLFALQFAKAAGARV-IATSSSDEKLERAKALGA 205

Query: 227 DKFV-VSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGF--PS 278
           D  +   +  +  + +     G+ +D +++           +  +   GV  L+GF    
Sbjct: 206 DHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGT-LAQSIKAVAPGGVISLIGFLSGF 264

Query: 279 KVKFSPASL----------NIGGTKDTQEMLEYCAAHKIYPQIETI-PIENVNEALERL 326
           +       L           +G     + M     AH+I P I+ + P E   EA   L
Sbjct: 265 EAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFEEAKEAYRYL 323

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336

>gnl|CDD|176184 cd05281, TDH, Threonine dehydrogenase

 Score = 83.1 bits (206), Expect = 6e-18
 Identities = 59/178 (33%), Positives = 84/178 (47%), Gaps = 20/178 (11%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G  +V I +    +C  DV I+  ++   S  K PL+ GHE  G V EVG  V+R KVGD
Sbjct: 24  GPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVGD 83

Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
           +V   T++  C  C  C  G   H  ++      +D DG      ++ Y+VV E   +K 
Sbjct: 84  YVSAETHIV-CGKCYQCRTG-NYHVCQNTKIL-GVDTDGC-----FAEYVVVPEENLWKN 135

Query: 150 ANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204
             D P  +A+   PL  A  TV    +       GKS+ + G G +G MA+   KA G
Sbjct: 136 DKDIPPEIASIQEPLGNAVHTVLAGDVS------GKSVLITGCGPIGLMAIAVAKAAG 187

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 341

>gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase

 Score = 82.9 bits (206), Expect = 6e-18
 Identities = 80/340 (23%), Positives = 126/340 (37%), Gaps = 95/340 (27%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL------VPGHEIVGIVKEVGHNVSR 84
           A G  +V I +   GV  AD++  +       YP       + G E+ G+V  VG  V+ 
Sbjct: 24  APGPGEVLIRVAAAGVNRADLLQRQGL-----YPPPPGASDILGLEVAGVVVAVGPGVTG 78

Query: 85  FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER 144
           +KVGD V                      CA              +  GGY+ Y+VV   
Sbjct: 79  WKVGDRV----------------------CA-------------LLAGGGYAEYVVVPAG 103

Query: 145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI--GLGGLGHMAVKFGKA 202
               +     L  AA L     T +  + +    + G+++ +I  G  G+G  A++  KA
Sbjct: 104 QLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGGLKAGETV-LIHGGASGVGTAAIQLAKA 162

Query: 203 FGLNVTVLSTSTSKKEEALSLLGADK--------FVVSSDLEQMKAL--GKSLDFIIDTA 252
            G  V   +  + +K EA   LGAD         F      E++K    G+ +D I+D  
Sbjct: 163 LGARVIA-TAGSEEKLEACRALGADVAINYRTEDFA-----EEVKEATGGRGVDVILDMV 216

Query: 253 SGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIG----------GT---------- 292
            GD+     +  L   G  VL+G     K   A L++           G+          
Sbjct: 217 GGDY-LARNLRALAPDGRLVLIGLLGGAK---AELDLAPLLRKRLTLTGSTLRSRSLEEK 272

Query: 293 ----KDTQE-MLEYCAAHKIYPQI-ETIPIENVNEALERL 326
                  +E +    A+ +I P I +  P+E   EA  R+
Sbjct: 273 AALAAAFREHVWPLFASGRIRPVIDKVFPLEEAAEAHRRM 312

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323

>gnl|CDD|131865 TIGR02818, adh_III_F_hyde, S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

 Score = 83.3 bits (206), Expect = 7e-18
 Identities = 65/238 (27%), Positives = 95/238 (39%), Gaps = 18/238 (7%)

Query: 7   SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLV 66
           S+  + WAA  P   L     +       +V + I   GVC+ D         +  +P++
Sbjct: 2   SRAAVAWAAGQP---LKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVI 58

Query: 67  PGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAID 125
            GHE  GIV+ VG  V+  KVGDHV +  Y   C +C++C  G    C     T    + 
Sbjct: 59  LGHEGAGIVEAVGEGVTSVKVGDHV-IPLYTAECGECKFCLSGKTNLCVAVRETQGKGLM 117

Query: 126 ADGT--ITKGG-----------YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPM 172
            DGT   +K G           +S Y VV E    KI    PL     L C   T    +
Sbjct: 118 PDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLEEVCLLGCGVTTGIGAV 177

Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV 230
           +     + G ++ V GLGG+G   ++  +    +  +       K E    LGA   V
Sbjct: 178 LNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELAKKLGATDCV 235

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols [Cellular processes, Detoxification, Energy metabolism, Fermentation]. Length = 368

>gnl|CDD|132492 TIGR03451, mycoS_dep_FDH, S-(hydroxymethyl)mycothiol dehydrogenase

 Score = 81.0 bits (200), Expect = 3e-17
 Identities = 73/260 (28%), Positives = 108/260 (41%), Gaps = 19/260 (7%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           G  +V + I  CGVC+ D+ +      D ++P + GHE  G+V+ VG  V+    GD+V 
Sbjct: 25  GPGEVIVDIQACGVCHTDLHYREGGIND-EFPFLLGHEAAGVVEAVGEGVTDVAPGDYV- 82

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID----ADGT-----ITKGGYSSYIVVHE 143
           V  +   C  C  C  G   +C     T NA       DGT     +  G ++   +VH 
Sbjct: 83  VLNWRAVCGQCRACKRGRPWYCFD---THNATQKMTLTDGTELSPALGIGAFAEKTLVHA 139

Query: 144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
             C K+      A A  L C  +      +     + G S+ VIG GG+G  A+      
Sbjct: 140 GQCTKVDPAADPAAAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALA 199

Query: 204 GLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPF 258
           G +  +      +K E     GA   V SS    +E ++AL  G   D +ID       +
Sbjct: 200 GASKIIAVDIDDRKLEWAREFGATHTVNSSGTDPVEAIRALTGGFGADVVIDAVGRPETY 259

Query: 259 DAYMSLLKVAGVYVLVGFPS 278
                   +AG  VLVG P+
Sbjct: 260 KQAFYARDLAGTVVLVGVPT 279

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione [Cellular processes, Detoxification]. Length = 358

>gnl|CDD|132409 TIGR03366, HpnZ_proposed, putative phosphonate catabolism associated alcohol dehydrogenase

 Score = 79.1 bits (195), Expect = 7e-17
 Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 16/226 (7%)

Query: 66  VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV-----NSCRDCEYCNDGLEVHCARSV-- 118
           V GHEIVG V  +    +    G  + +G  V       C  C  C  GL   C  S+  
Sbjct: 1   VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKC-DSLRK 59

Query: 119 YTFNAIDADGTITKGGYSSYIVVHE-RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177
           Y   A+D+   ++ GGY+ +  +        + +D P A+AAP  CA  TV    +    
Sbjct: 60  YGHEALDSGWPLS-GGYAEHCHLPAGTAIVPVPDDLPDAVAAPAGCATATV-MAALEAAG 117

Query: 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---VVSSD 234
           +  G+ + V+G G LG  A     A G    V +  +  + E     GA       V ++
Sbjct: 118 DLKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPDRRELALSFGATALAEPEVLAE 177

Query: 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG--FPS 278
            +     G+ +D  ++ +       A +  L V G  VL G  FP 
Sbjct: 178 RQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG 223

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. Length = 280

>gnl|CDD|132245 TIGR03201, dearomat_had, 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

 Score = 79.9 bits (197), Expect = 8e-17
 Identities = 76/286 (26%), Positives = 117/286 (40%), Gaps = 36/286 (12%)

Query: 13  WAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIW----TRNKHGDSKYPLVPG 68
           W   +P   +         +G+ DV + +  CGVC+ D+ +     R  H     PL  G
Sbjct: 2   WMMTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNH---ALPLALG 58

Query: 69  HEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADG 128
           HEI G V + G   + + +G  V V   V  C +CE C  G    C       N +    
Sbjct: 59  HEISGRVIQAGAGAASW-IGKAVIVPA-VIPCGECELCKTGRGTICRAQKMPGNDM---- 112

Query: 129 TITKGGYSSYIVVHERYCYKIAN------DYPLALAAPLLCAGITVYTPMMRHKMNQPGK 182
              +GG++S+IVV  +    +          PL   + +  A  T Y   ++  + + G 
Sbjct: 113 ---QGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTTPYQAAVQAGL-KKGD 168

Query: 183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL------E 236
            + VIG GG+G   V+  KA G  V  +     K  E +   GAD  +   D       +
Sbjct: 169 LVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKL-EMMKGFGADLTLNPKDKSAREVKK 227

Query: 237 QMKALGK-----SLDFIIDTASGDHPF-DAYMSLLKVAGVYVLVGF 276
            +KA  K     S  + I   SG  P  ++ +SLL   G  V+VG+
Sbjct: 228 LIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGY 273

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. Length = 349

>gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.8 bits (195), Expect = 2e-16
 Identities = 77/306 (25%), Positives = 121/306 (39%), Gaps = 67/306 (21%)

Query: 64  PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA 123
           P + G ++ G+V+ VG  V+RF+VGD V    Y         C  GL             
Sbjct: 58  PAILGCDVAGVVEAVGEGVTRFRVGDEV----Y--------GCAGGL------------- 92

Query: 124 IDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKS 183
               G   +G  + Y VV  R       +  +  AA L   GIT +  ++     Q G++
Sbjct: 93  ---GGL--QGSLAEYAVVDARLLALKPANLSMREAAALPLVGITAWEGLVDRAAVQAGQT 147

Query: 184 LGV-IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD------KFVVSSDLE 236
           + +  G GG+GH+AV+  KA G  V   +T++S+K      LGAD      + VV    E
Sbjct: 148 VLIHGGAGGVGHVAVQLAKAAGARVY--ATASSEKAAFARSLGADPIIYYRETVV----E 201

Query: 237 QMKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPAS---LNIGG 291
            +     G+  D + DT  G+   DA    + + G  V +   +    +P S       G
Sbjct: 202 YVAEHTGGRGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGATHDLAPLSFRNATYSG 260

Query: 292 T------------KDTQEMLEYCA----AHKIYPQIE--TIPIENVNEALERLIKRDVKY 333
                            E+L   A      ++ P ++  T P+E    A  RL     + 
Sbjct: 261 VFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLLDPRTFPLEEAAAAHARLESGSARG 320

Query: 334 RFVIDI 339
           + VID+
Sbjct: 321 KIVIDV 326

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326

>gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 78.0 bits (193), Expect = 3e-16
 Identities = 61/253 (24%), Positives = 98/253 (38%), Gaps = 39/253 (15%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G+ +V I +   G+  AD ++ R  +      P   G+E  G+V+ VG  V+ F VGD V
Sbjct: 26  GAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRV 85

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
            V                              I A      G Y+ Y +V      K+ +
Sbjct: 86  SV------------------------------IPAADLGQYGTYAEYALVPAAAVVKLPD 115

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL 210
                 AA L    +T Y  ++     +PG S+ +      +G  A++   A G    + 
Sbjct: 116 GLSFVEAAALWMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGA-TVIA 174

Query: 211 STSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAYMSLL 265
           +T TS+K +AL  LGA   +V+ + + +  +     GK +D + D   G   F      L
Sbjct: 175 TTRTSEKRDALLALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDPVGGPQ-FAKLADAL 233

Query: 266 KVAGVYVLVGFPS 278
              G  V+ G  S
Sbjct: 234 APGGTLVVYGALS 246

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328

>gnl|CDD|176244 cd08284, FDH_like_2, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

 Score = 78.1 bits (193), Expect = 3e-16
 Identities = 68/261 (26%), Positives = 98/261 (37%), Gaps = 40/261 (15%)

Query: 35  DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
            D  + +T   +C +D+   R  H  S    V GHE VG V EVG  V   KVGD V V 
Sbjct: 26  TDAIVKVTAAAICGSDLHIYRG-HIPSTPGFVLGHEFVGEVVEVGPEVRTLKVGDRV-VS 83

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
            +  +C +C YC  G    CA+      A         G  + Y+ V            P
Sbjct: 84  PFTIACGECFYCRRGQSGRCAKGGLFGYAG---SPNLDGAQAEYVRV------------P 128

Query: 155 LA----LAAP--------LLCAGI--TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
            A    L  P        LL   I  T Y    R    +PG ++ VIG G +G  AV   
Sbjct: 129 FADGTLLKLPDGLSDEAALLLGDILPTGYFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSA 187

Query: 201 KAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL------GKSLDFIIDTASG 254
           +  G           ++ E  + LGA+   ++ +  +          G+  D +++   G
Sbjct: 188 QVLGAARVFAVDPVPERLERAAALGAE--PINFEDAEPVERVREATEGRGADVVLEAVGG 245

Query: 255 DHPFDAYMSLLKVAGVYVLVG 275
               D    L++  GV   VG
Sbjct: 246 AAALDLAFDLVRPGGVISSVG 266

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 344

>gnl|CDD|129775 TIGR00692, tdh, L-threonine 3-dehydrogenase

 Score = 78.0 bits (192), Expect = 3e-16
 Identities = 60/202 (29%), Positives = 87/202 (43%), Gaps = 14/202 (6%)

Query: 32  VGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVG 88
            G  +V I +    +C  DV I+  ++   S  K P V GHE+ G V  +G  V   KVG
Sbjct: 21  PGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVG 80

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D+V V T++  C  C  C  G + H  ++   F      G  T G ++ Y VV  +  +K
Sbjct: 81  DYVSVETHI-VCGKCYACRRG-QYHVCQNTKIF------GVDTDGCFAEYAVVPAQNIWK 132

Query: 149 IANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
                P   A      G  V+T +        GKS+ V G G +G MA+   KA G    
Sbjct: 133 NPKSIPPEYATIQEPLGNAVHTVL---AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPV 189

Query: 209 VLSTSTSKKEEALSLLGADKFV 230
           ++S     + E    +GA   V
Sbjct: 190 IVSDPNEYRLELAKKMGATYVV 211

This protein is a tetrameric, zinc-binding, NAD-dependent enzyme of threonine catabolism. Closely related proteins include sorbitol dehydrogenase, xylitol dehydrogenase, and benzyl alcohol dehydrogenase. Eukaryotic examples of this enzyme have been demonstrated experimentally but do not appear in database search results.E. coli His-90 modulates substrate specificity and is believed part of the active site [Energy metabolism, Amino acids and amines]. Length = 340

>gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1

 Score = 77.6 bits (192), Expect = 6e-16
 Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 46/227 (20%)

Query: 55  RNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114
             K+   ++PL  G +  G+V ++G  V  F++GD                     EV  
Sbjct: 65  SCKYSGIEFPLTLGRDCSGVVVDIGSGVKSFEIGD---------------------EVWG 103

Query: 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174
           A   ++           +G ++ Y+VV E    K   +     AA L  AG+T ++ ++ 
Sbjct: 104 AVPPWS-----------QGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAGLTAWSALVN 152

Query: 175 H----KMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK- 228
                  N  GK + ++G  GG+G  A++  KA+G +VT   T ++     +  LGAD  
Sbjct: 153 VGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTT--TCSTDAIPLVKSLGADDV 210

Query: 229 --FVVSSDLEQMKALGKSLDFIIDTA-SGDHPFDAYMSLLKVAGVYV 272
             +      E++   GK  D I+DT       +   + LLK  G YV
Sbjct: 211 IDYNNEDFEEELTERGK-FDVILDTVGGDTEKW--ALKLLKKGGTYV 254

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350

>gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family

 Score = 76.9 bits (190), Expect = 6e-16
 Identities = 69/270 (25%), Positives = 110/270 (40%), Gaps = 53/270 (19%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKH----GDSKYPLVPGHEIVGIVKEVGHNVSRFK 86
              + +V I +   GV   D++    K+    G S    + G E+ G V  VG  VSR+K
Sbjct: 24  VPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASD---ILGLEVAGEVVAVGEGVSRWK 80

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
           VGD V                      CA              +  GGY+ Y+ V     
Sbjct: 81  VGDRV----------------------CA-------------LVAGGGYAEYVAVPAGQV 105

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGL 205
             +     L  AA L     TV++ + +    + G+++ +  G  G+G  A++  KAFG 
Sbjct: 106 LPVPEGLSLVEAAALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGA 165

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFDA 260
            V   +  + +K  A   LGAD  +   +   +E +KA   GK +D I+D   G +  + 
Sbjct: 166 RVFT-TAGSDEKCAACEALGADIAINYREEDFVEVVKAETGGKGVDVILDIVGGSY-LNR 223

Query: 261 YMSLLKVAGVYVLVGFPSKVKFSPASLNIG 290
            +  L + G  V +GF    K   A L++G
Sbjct: 224 NIKALALDGRIVQIGFQGGRK---AELDLG 250

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325

>gnl|CDD|176181 cd05278, FDH_like, Formaldehyde dehydrogenases

 Score = 77.3 bits (191), Expect = 6e-16
 Identities = 66/266 (24%), Positives = 105/266 (39%), Gaps = 37/266 (13%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           G  D  + +T   +C +D+   R     +K+ ++ GHE VG V EVG +V R K GD V 
Sbjct: 24  GPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDRVS 83

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE--RYCYKIA 150
           V   +  C  C +C  G   HC             G    GG + Y+ V        KI 
Sbjct: 84  VP-CITFCGRCRFCRRGYHAHCE----NGLWGWKLGNRIDGGQAEYVRVPYADMNLAKIP 138

Query: 151 NDYPLALAAPLL------------CAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVK 198
           +  P    A +L             AGI            +PG ++ VIG G +G  AV 
Sbjct: 139 DGLPDE-DALMLSDILPTGFHGAELAGI------------KPGSTVAVIGAGPVGLCAVA 185

Query: 199 FGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTAS 253
             +  G    +   S  ++ +     GA   +   +   +EQ+  L  G+ +D +I+   
Sbjct: 186 GARLLGAARIIAVDSNPERLDLAKEAGATDIINPKNGDIVEQILELTGGRGVDCVIEAVG 245

Query: 254 GDHPFDAYMSLLKVAGVYVLVGFPSK 279
            +  F+  + +++  G    VG   K
Sbjct: 246 FEETFEQAVKVVRPGGTIANVGVYGK 271

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 347

>gnl|CDD|182371 PRK10309, PRK10309, galactitol-1-phosphate dehydrogenase; Provisional

 Score = 76.4 bits (188), Expect = 1e-15
 Identities = 67/226 (29%), Positives = 104/226 (46%), Gaps = 22/226 (9%)

Query: 35  DDVSITITHCGVCYADV--IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           DDV + +   G+C +D+  I+   K+G   YP+  GHE  G V+ VG  V     GD V 
Sbjct: 26  DDVLVKVASSGLCGSDIPRIF---KNGAHYYPITLGHEFSGYVEAVGSGVDDLHPGDAVA 82

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAND 152
               +  C  C  C  G    CA+  Y F      G+   GG + YIVV  +  + +  D
Sbjct: 83  C-VPLLPCFTCPECLRGFYSLCAK--YDFI-----GSRRDGGNAEYIVVKRKNLFALPTD 134

Query: 153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLS 211
            P+   A      ITV            GK++ +IG G +G +A++   A G   VT + 
Sbjct: 135 MPIEDGA--FIEPITVGLHAFHLAQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAID 192

Query: 212 TSTSKKEEALSLLGADKFVVSSDL--EQMKALGKSLDF---IIDTA 252
            ++ K   A S LGA +   S ++   Q++++ + L F   I++TA
Sbjct: 193 INSEKLALAKS-LGAMQTFNSREMSAPQIQSVLRELRFDQLILETA 237

Length = 347

>gnl|CDD|176188 cd05285, sorbitol_DH, Sorbitol dehydrogenase

 Score = 76.0 bits (188), Expect = 2e-15
 Identities = 71/264 (26%), Positives = 106/264 (40%), Gaps = 30/264 (11%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
             G  +V + +   G+C +DV  +   + GD   K P+V GHE  G V  VG  V+  KV
Sbjct: 19  EPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKV 78

Query: 88  GDHV----GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE 143
           GD V    GV      CR CE+C  G    C   +        DGT+ +     Y+    
Sbjct: 79  GDRVAIEPGV-----PCRTCEFCKSGRYNLC-PDMRFAATPPVDGTLCR-----YVNHPA 127

Query: 144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
            +C+K+ ++  L   A +    + V+    R    +PG ++ V G G +G +     KAF
Sbjct: 128 DFCHKLPDNVSLEEGALVEPLSVGVHA--CRRAGVRPGDTVLVFGAGPIGLLTAAVAKAF 185

Query: 204 G-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDTASGD 255
           G   V V     S+ E A  L       V ++     A        GK  D +I+  +G 
Sbjct: 186 GATKVVVTDIDPSRLEFAKELGATHTVNVRTEDTPESAEKIAELLGGKGPDVVIE-CTGA 244

Query: 256 HP-FDAYMSLLKVAGVYVLVGFPS 278
                  +   +  G  VLVG   
Sbjct: 245 ESCIQTAIYATRPGGTVVLVGMGK 268

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 343

>gnl|CDD|176259 cd08299, alcohol_DH_class_I_II_IV, class I, II, IV alcohol dehydrogenases

 Score = 74.7 bits (184), Expect = 5e-15
 Identities = 53/183 (28%), Positives = 76/183 (41%), Gaps = 16/183 (8%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V I I   G+C +D      K   + +P++ GHE  GIV+ VG  V+  K GD V +  
Sbjct: 34  EVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPGDKV-IPL 91

Query: 96  YVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT-------------ITKGGYSSYIVV 141
           +V  C  C  C +     C ++ +     +  DGT             +    +S Y VV
Sbjct: 92  FVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVV 151

Query: 142 HERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGK 201
            E    KI    PL     + C   T Y   +      PG +  V GLGG+G  A+   K
Sbjct: 152 DEIAVAKIDAAAPLEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCK 211

Query: 202 AFG 204
           A G
Sbjct: 212 AAG 214

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 373

>gnl|CDD|176192 cd08230, glucose_DH, Glucose dehydrogenase

 Score = 74.2 bits (183), Expect = 7e-15
 Identities = 71/272 (26%), Positives = 96/272 (35%), Gaps = 37/272 (13%)

Query: 28  NRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYP-----LVPGHEIVGIVKEVGHNV 82
                   +V +     GVC  D      ++G    P     LV GHE +G+V+EVG   
Sbjct: 19  PEPEPTPGEVLVRTLEVGVCGTDREIVAGEYG--TAPPGEDFLVLGHEALGVVEEVGDG- 75

Query: 83  SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID-ADGTITKGGYSSYIVV 141
           S    GD V V T       C  C  G    C    YT   I    G + +     Y V 
Sbjct: 76  SGLSPGDLV-VPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMRE-----YFVD 129

Query: 142 HERYCYKIANDYPLA----LAAPLLCA------GITVYTPMMRHKMNQPGKSLGVIGLGG 191
              Y  K+     LA    L  PL            V   +       P ++L V+G G 
Sbjct: 130 DPEYLVKV--PPSLADVGVLLEPLSVVEKAIEQAEAVQKRLPT---WNPRRAL-VLGAGP 183

Query: 192 LGHMAVKFGKAFGLNVTVLSTS--TSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           +G +A    +  G  V VL+       K + +  LGA     S        L    D II
Sbjct: 184 IGLLAALLLRLRGFEVYVLNRRDPPDPKADIVEELGATYVNSSKTPVAEVKLVGEFDLII 243

Query: 250 DTASGD--HPFDAYMSLLKVAGVYVLVGFPSK 279
           + A+G     F+A +  L   GV +L G P  
Sbjct: 244 E-ATGVPPLAFEA-LPALAPNGVVILFGVPGG 273

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 355

>gnl|CDD|176261 cd08301, alcohol_DH_plants, Plant alcohol dehydrogenase

 Score = 74.3 bits (183), Expect = 8e-15
 Identities = 69/285 (24%), Positives = 107/285 (37%), Gaps = 42/285 (14%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V I I H  +C+ DV +   K     +P + GHE  GIV+ VG  V+  K GDHV +  
Sbjct: 29  EVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPGDHV-LPV 87

Query: 96  YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGG------------------YSS 137
           +   C++C +C       C   +   N  D    I  G                   +S 
Sbjct: 88  FTGECKECRHCKSEKSNMC--DLLRIN-TDRGVMINDGKSRFSINGKPIYHFVGTSTFSE 144

Query: 138 YIVVHERYCYKIANDYPLALAAPLLCA-----GITVYTPMMRHKMNQPGKSLGVIGLGGL 192
           Y VVH     KI  + PL     L C      G       +     + G ++ + GLG +
Sbjct: 145 YTVVHVGCVAKINPEAPLDKVCLLSCGVSTGLGAAWNVAKV-----KKGSTVAIFGLGAV 199

Query: 193 GHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ------MKALGKSLD 246
           G    +  +  G +  +       K E     G  +FV   D ++       +  G  +D
Sbjct: 200 GLAVAEGARIRGASRIIGVDLNPSKFEQAKKFGVTEFVNPKDHDKPVQEVIAEMTGGGVD 259

Query: 247 FIID-TASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPASL 287
           +  + T + D    A+  +    GV VL+G P K       P +L
Sbjct: 260 YSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNL 304

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the substrate binding pocket and therefore in substrate specificity. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48) , then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 369

>gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase

 Score = 70.0 bits (172), Expect = 8e-15
 Identities = 36/131 (27%), Positives = 57/131 (43%), Gaps = 17/131 (12%)

Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSL 245
           G+G  AV+  KA G    +    + +K E    LGAD  +   D   +E+++ L  G+ +
Sbjct: 1   GVGLAAVQLAKALGAARVIAVDRSEEKLELAKELGADHVINYRDEDFVERVRELTGGRGV 60

Query: 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL----------NIGGTK 293
           D +ID        +  + LL+  G  V+VG P    V F    L            GG +
Sbjct: 61  DVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFPLRDLLLKELTILGSLGGGRE 120

Query: 294 DTQEMLEYCAA 304
           + +E LE  A+
Sbjct: 121 EFEEALELLAS 131

Length = 131

>gnl|CDD|176226 cd08265, Zn_ADH3, Alcohol dehydrogenases of the MDR family

 Score = 73.7 bits (181), Expect = 1e-14
 Identities = 55/230 (23%), Positives = 97/230 (42%), Gaps = 28/230 (12%)

Query: 35  DDVSITITHCGVCYADV-IWTRNKHGD------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
           D++ I +  CG+C +D+ ++  +K G       +++P+V GHE  G+V++ G NV  F+ 
Sbjct: 52  DEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEK 111

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           GD V     +  C  C  C  G   HC         +   G    G ++ YI V+ RY +
Sbjct: 112 GDPVTAEEMM-WCGMCRACRSGSPNHCK----NLKEL---GFSADGAFAEYIAVNARYAW 163

Query: 148 KIANDYPL----------ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAV 197
           +I     +          AL  P   A   ++    R    +PG  + V G G +G  A+
Sbjct: 164 EINELREIYSEDKAFEAGALVEPTSVAYNGLFI---RGGGFRPGAYVVVYGAGPIGLAAI 220

Query: 198 KFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF 247
              KA G +  +    + ++      +GAD     + +    +  K ++ 
Sbjct: 221 ALAKAAGASKVIAFEISEERRNLAKEMGADYVFNPTKMRDCLSGEKVMEV 270

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 384

>gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 72.7 bits (179), Expect = 2e-14
 Identities = 79/320 (24%), Positives = 126/320 (39%), Gaps = 67/320 (20%)

Query: 51  VIWTRNK--HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCND 108
           V W           YP VPG +  G+V  VG  V+ +KVGD V                 
Sbjct: 42  VDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRV----------------- 84

Query: 109 GLEVHCARSVYTFNAIDADGTITK-GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT 167
                     Y  +       + + G ++ Y VV  R    + +      AA L CAG+T
Sbjct: 85  ---------AYHAS-------LARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLT 128

Query: 168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA 226
            Y  + +    + G+++ + G  GG+G  AV+  K  GL   V++T + +  E +  LGA
Sbjct: 129 AYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGL--RVITTCSKRNFEYVKSLGA 186

Query: 227 DKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAYMSLLKVAG--VYVLVGF-PS 278
           D  +  +D +  + +     G+ +D ++DT  G+    A    L   G  V +      S
Sbjct: 187 DHVIDYNDEDVCERIKEITGGRGVDAVLDTVGGETA-AALAPTLAFNGHLVCIQGRPDAS 245

Query: 279 KVKFSPASLNIG----------GTKDTQ--------EMLEYCAAHKIYPQ-IETIPIENV 319
                  +L++           G             E+LE  AA K+ P  IE +P E +
Sbjct: 246 PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVIEVLPFEQL 305

Query: 320 NEALERLIKRDVKYRFVIDI 339
            EAL  L  R  + + V+ I
Sbjct: 306 PEALRALKDRHTRGKIVVTI 325

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325

>gnl|CDD|215378 PLN02702, PLN02702, L-idonate 5-dehydrogenase

 Score = 71.7 bits (176), Expect = 5e-14
 Identities = 67/261 (25%), Positives = 109/261 (41%), Gaps = 21/261 (8%)

Query: 27  FNRRAVGSDDVSITITHCGVCYADVIWTRN---KHGDSKYPLVPGHEIVGIVKEVGHNVS 83
           F    +G  DV + +   G+C +DV + +         K P+V GHE  GI++EVG  V 
Sbjct: 34  FKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVK 93

Query: 84  RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE 143
              VGD V +   + SC  C  C +G    C      F A         G  ++ +V   
Sbjct: 94  HLVVGDRVALEPGI-SCWRCNLCKEGRYNLCPE--MKFFATPP----VHGSLANQVVHPA 146

Query: 144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
             C+K+  +  L   A  +C  ++V     R     P  ++ V+G G +G + +   +AF
Sbjct: 147 DLCFKLPENVSLEEGA--MCEPLSVGVHACRRANIGPETNVLVMGAGPIGLVTMLAARAF 204

Query: 204 GLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQM--------KALGKSLDFIIDTASG 254
           G    V+     ++      LGAD+ V VS+++E +        KA+G  +D   D    
Sbjct: 205 GAPRIVIVDVDDERLSVAKQLGADEIVLVSTNIEDVESEVEEIQKAMGGGIDVSFDCVGF 264

Query: 255 DHPFDAYMSLLKVAGVYVLVG 275
           +      +   +  G   LVG
Sbjct: 265 NKTMSTALEATRAGGKVCLVG 285

Length = 364

>gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

 Score = 70.3 bits (173), Expect = 1e-13
 Identities = 63/301 (20%), Positives = 105/301 (34%), Gaps = 58/301 (19%)

Query: 64  PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA 123
           P VPG +  G+V+ VG  V   KVGD                            V+  N 
Sbjct: 58  PYVPGSDGAGVVEAVGEGVDGLKVGD---------------------------RVWLTNL 90

Query: 124 IDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKS 183
               G    G  + Y+VV       + +       A L    +T Y  +      + G++
Sbjct: 91  --GWGRRQ-GTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALTAYRALFHRAGAKAGET 147

Query: 184 LGVIG-LGGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKFVVSSD---LEQM 238
           + V G  G +GH AV+  +  G    V++T S+++  E +   GAD           +++
Sbjct: 148 VLVHGGSGAVGHAAVQLARWAGA--RVIATASSAEGAELVRQAGADAVFNYRAEDLADRI 205

Query: 239 KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSP---ASLNIG 290
            A   G+ +D II+  +  +     + +L   G  V+ G       +  +P      +I 
Sbjct: 206 LAATAGQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIR 264

Query: 291 GT---KDTQEMLEYCAAH--------KIYPQIE-TIPIENVNEALERLIKRDVKYRFVID 338
           G      T E     A           + P I    P+E    A E +       + V+D
Sbjct: 265 GVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLD 324

Query: 339 I 339
            
Sbjct: 325 P 325

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176246 cd08286, FDH_like_ADH2, formaldehyde dehydrogenase (FDH)-like

 Score = 69.6 bits (171), Expect = 2e-13
 Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 30/223 (13%)

Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDA 126
           GHE VG+V+EVG  V+ FKVGD V +   ++SC  C YC  GL  HC    +   N I  
Sbjct: 59  GHEGVGVVEEVGSAVTNFKVGDRVLISC-ISSCGTCGYCRKGLYSHCESGGWILGNLI-- 115

Query: 127 DGT------ITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI--TVYTPMMRHKMN 178
           DGT      I     S Y +              +   A ++ + I  T Y   + +   
Sbjct: 116 DGTQAEYVRIPHADNSLYKLPEG-----------VDEEAAVMLSDILPTGYECGVLNGKV 164

Query: 179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
           +PG ++ ++G G +G  A+   + +    + ++    ++ E A   LGA   V S+  + 
Sbjct: 165 KPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAKK-LGATHTVNSAKGDA 223

Query: 238 MKAL-----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG 275
           ++ +     G+ +D +I+       F+    L+   G    VG
Sbjct: 224 IEQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVG 266

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like

 Score = 69.1 bits (170), Expect = 3e-13
 Identities = 65/307 (21%), Positives = 101/307 (32%), Gaps = 74/307 (24%)

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
             YP + G +  G V EVG  V+RFKVGD V             + + G           
Sbjct: 52  PSYPAILGCDFAGTVVEVGSGVTRFKVGDRV-----------AGFVHGGNPND------- 93

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT--------PM 172
                       G +  Y+V       KI ++     AA L    +T           P+
Sbjct: 94  ---------PRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAALALFQKLGLPL 144

Query: 173 MRHKMNQPGKSLGVIGLGG---LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF 229
              K +   K   V+  GG   +G +A++  K  G    V++T++ K  + +  LGAD  
Sbjct: 145 PPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYK--VITTASPKNFDLVKSLGADA- 201

Query: 230 VV---SSDLEQ--MKALGKSLDFIIDTAS------------GDHPFDAYMSLLKVAGVYV 272
           V      D+ +    A G  L + +D  S            G       +SLL V     
Sbjct: 202 VFDYHDPDVVEDIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEE-- 259

Query: 273 LVGFPSKVKFSPASLNIGGTKDTQEML----------EYCAAHKIYP-QIETIP--IENV 319
                  VK           +  ++            E     K+ P  +  +   +E V
Sbjct: 260 -TEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWKYLPELLEEGKLKPHPVRVVEGGLEGV 318

Query: 320 NEALERL 326
            E L+ L
Sbjct: 319 QEGLDLL 325

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339

>gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 68.9 bits (169), Expect = 5e-13
 Identities = 68/269 (25%), Positives = 101/269 (37%), Gaps = 48/269 (17%)

Query: 33  GSDDVSITITHCGVCYADVIWTR------NKHGDS---------------KYPLVPGHEI 71
              +V I +  CGV   D I TR         G +                +P + G +I
Sbjct: 27  APGEVLIRVGACGVNNTD-INTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADI 85

Query: 72  VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTIT 131
           VG V  VG  V   ++G+ V V                              ID  G+  
Sbjct: 86  VGRVVAVGEGVDTARIGERVLV-------DPSIR---------DPPEDDPADIDYIGSER 129

Query: 132 KGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN-QPGKSLGVIGL- 189
            GG++ Y VV     Y + +       A   C+  T     M  +     G+++ V G  
Sbjct: 130 DGGFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTAEN--MLERAGVGAGETVLVTGAS 187

Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV--SSDLEQMKALGK-SLD 246
           GG+G   V+  K  G    V++ + + KEEA+  LGAD  ++  +  L   KALG   +D
Sbjct: 188 GGVGSALVQLAKRRG--AIVIAVAGAAKEEAVRALGADTVILRDAPLLADAKALGGEPVD 245

Query: 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVG 275
            + D   G   F   + LL+  G YV  G
Sbjct: 246 VVADVVGGPL-FPDLLRLLRPGGRYVTAG 273

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350

>gnl|CDD|176230 cd08269, Zn_ADH9, Alcohol dehydrogenases of the MDR family

 Score = 67.0 bits (164), Expect = 2e-12
 Identities = 59/289 (20%), Positives = 102/289 (35%), Gaps = 67/289 (23%)

Query: 21  VLSPYSFN-----RRAVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIV 72
           +  P  F      R   G   V + +  CGVC +D+  + + +        P  PGHE  
Sbjct: 1   LTGPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGW 60

Query: 73  GIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITK 132
           G V  +G  V    VGD V                                      ++ 
Sbjct: 61  GRVVALGPGVRGLAVGDRVAG------------------------------------LSG 84

Query: 133 GGYSSYIVVHERYCYKI-ANDYPLALAA-PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG 190
           G ++ Y +    +   + +     A    PL CA   +   + R    + GK++ VIG G
Sbjct: 85  GAFAEYDLADADHAVPLPSLLDGQAFPGEPLGCA---LN--VFRRGWIRAGKTVAVIGAG 139

Query: 191 GLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSL---LGADKFVVS---SDLEQMKAL-- 241
            +G + ++   A G   V  +     ++   L+L   LGA + V     + +E+++ L  
Sbjct: 140 FIGLLFLQLAAAAGARRVIAI----DRRPARLALARELGATEVVTDDSEAIVERVRELTG 195

Query: 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIG 290
           G   D +I+      P D    L+   G  V+ G+    +  P  +   
Sbjct: 196 GAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYH---QDGPRPVPFQ 241

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 312

>gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR)

 Score = 66.7 bits (164), Expect = 2e-12
 Identities = 63/256 (24%), Positives = 97/256 (37%), Gaps = 54/256 (21%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
             G  +V +  T  GV + D  + R+       P V G E  G+V+ VG  V+ FKVGD 
Sbjct: 23  EPGPGEVLVRNTAIGVNFID-TYFRSGLYPLPLPFVLGVEGAGVVEAVGPGVTGFKVGDR 81

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
           V             Y                           G Y+ Y VV      K+ 
Sbjct: 82  VA------------YAGPP-----------------------GAYAEYRVVPASRLVKLP 106

Query: 151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-----GGLGHMAVKFGKAFGL 205
           +      AA LL  G+T +   +  +        G   L     GG+G +  ++ KA G 
Sbjct: 107 DGISDETAAALLLQGLTAH--YLLRETYPVKP--GDTVLVHAAAGGVGLLLTQWAKALG- 161

Query: 206 NVTVLST-STSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFD 259
             TV+ T S+ +K E     GAD  +   D   +E+++ +  G+ +D + D   G   F+
Sbjct: 162 -ATVIGTVSSEEKAELARAAGADHVINYRDEDFVERVREITGGRGVDVVYD-GVGKDTFE 219

Query: 260 AYMSLLKVAGVYVLVG 275
             +  L+  G  V  G
Sbjct: 220 GSLDSLRPRGTLVSFG 235

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320

>gnl|CDD|176204 cd08242, MDR_like, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 65.7 bits (161), Expect = 4e-12
 Identities = 73/306 (23%), Positives = 116/306 (37%), Gaps = 47/306 (15%)

Query: 45  GVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCE 104
           G+C  D+   +   G   +P VPGHE VGIV+E         VG  V VG    +C  CE
Sbjct: 35  GICNTDLEIYK---GYYPFPGVPGHEFVGIVEEGP---EAELVGKRV-VGEINIACGRCE 87

Query: 105 YCNDGLEVHCA-RSV---YTFNAIDADGTITKGGYSSYIVVHERYCYKIAN---DYPLAL 157
           YC  GL  HC  R+V      +          G ++ Y+ +     + + +   D     
Sbjct: 88  YCRRGLYTHCPNRTVLGIVDRD----------GAFAEYLTLPLENLHVVPDLVPDEQAVF 137

Query: 158 AAPLLCAG-ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK 216
           A PL  A  I    P+       PG  + V+G G LG +  +     G +V ++    S+
Sbjct: 138 AEPLAAALEILEQVPI------TPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRH-SE 190

Query: 217 KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVL--- 273
           K      LG +  V+  + E     G   D +++        +  + L++  G  VL   
Sbjct: 191 KLALARRLGVE-TVLPDEAES---EGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKST 246

Query: 274 VGFPSKVKFSPA---SLNIGGTK--DTQEMLEYCAAHKIY--PQIE-TIPIENVNEALER 325
              P+    + A    + + G++       L       +   P I    P+E   EA ER
Sbjct: 247 YAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEALEAFER 306

Query: 326 LIKRDV 331
             +   
Sbjct: 307 AAEPGA 312

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319

>gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase

 Score = 65.3 bits (160), Expect = 5e-12
 Identities = 53/232 (22%), Positives = 90/232 (38%), Gaps = 53/232 (22%)

Query: 35  DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           D+V + +   G+ + DV+         + PL  G E  GIV  VG  V+  KVGD V   
Sbjct: 1   DEVEVEVKAAGLNFRDVLVALGLLPGDETPL--GLECSGIVTRVGSGVTGLKVGDRV--- 55

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
                                              +  G +++++ V  R   KI +   
Sbjct: 56  -------------------MG--------------LAPGAFATHVRVDARLVVKIPDSLS 82

Query: 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI--GLGGLGHMAVKFGKAFGLNV--TVL 210
              AA L  A +T Y  ++     Q G+S+ +I    GG+G  A++  +  G  V  TV 
Sbjct: 83  FEEAATLPVAYLTAYYALVDLARLQKGESV-LIHAAAGGVGQAAIQLAQHLGAEVFATV- 140

Query: 211 STSTSKKEEALSLLGADKFVVSSD-----LEQMKAL--GKSLDFIIDTASGD 255
              + +K E L  LG     + S       + +     G+ +D ++++ SG+
Sbjct: 141 --GSEEKREFLRELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE 190

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293

>gnl|CDD|180054 PRK05396, tdh, L-threonine 3-dehydrogenase; Validated

 Score = 65.2 bits (160), Expect = 7e-12
 Identities = 65/225 (28%), Positives = 95/225 (42%), Gaps = 33/225 (14%)

Query: 32  VGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVG 88
            G +DV I +    +C  DV I+  ++        P+V GHE VG V EVG  V+ FKVG
Sbjct: 23  PGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKVG 82

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D V    ++  C  C  C  G   H  R+          G    G ++ Y+V+     +K
Sbjct: 83  DRVSGEGHIV-CGHCRNCRAG-RRHLCRNTKGV------GVNRPGAFAEYLVIPAFNVWK 134

Query: 149 IANDYPLALAA---PLLCAGITVYT-PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204
           I +D P  LAA   P   A  T  +  ++       G+ + + G G +G MA    K  G
Sbjct: 135 IPDDIPDDLAAIFDPFGNAVHTALSFDLV-------GEDVLITGAGPIGIMAAAVAKHVG 187

Query: 205 L-NVTVLSTSTSKKEEALSL---LGADKFVVSSD---LEQMKALG 242
             +V +    T   E  L L   +GA + V  +     + M  LG
Sbjct: 188 ARHVVI----TDVNEYRLELARKMGATRAVNVAKEDLRDVMAELG 228

Length = 341

>gnl|CDD|182130 PRK09880, PRK09880, L-idonate 5-dehydrogenase; Provisional

 Score = 64.3 bits (157), Expect = 1e-11
 Identities = 57/216 (26%), Positives = 87/216 (40%), Gaps = 36/216 (16%)

Query: 35  DDVSITITHCGVCYADVIWTRN-KHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           +   + IT  G+C +D+ + +  K G+   K P+V GHE++G +     + S  K G  V
Sbjct: 28  NGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSGLKEGQTV 85

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCAR-----SVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            +      C  C+YC    E  C       S   F  +D       GG++ Y VV    C
Sbjct: 86  AINP-SKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVD-------GGFTRYKVVDTAQC 137

Query: 147 YKIANDYP---LALAAPLLCAGITVYTPMMRHKMNQPG----KSLGVIGLGGLGHMAVKF 199
                      +A A PL  A          H  +Q G    K + V G+G +G + V  
Sbjct: 138 IPYPEKADEKVMAFAEPLAVA---------IHAAHQAGDLQGKRVFVSGVGPIGCLIVAA 188

Query: 200 GKAFGLNVTVLSTSTSKKEEALSL-LGADKFVVSSD 234
            K  G    V +   S +  +L+  +GADK V   +
Sbjct: 189 VKTLGAAEIVCA-DVSPRSLSLAREMGADKLVNPQN 223

Length = 343

>gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase

 Score = 62.8 bits (153), Expect = 4e-11
 Identities = 56/231 (24%), Positives = 90/231 (38%), Gaps = 42/231 (18%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKH-GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G  +V I +    + + D++  R  +     YP  PG E  G+V+ VG +V+R  VGD V
Sbjct: 6   GPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEV 65

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
             GT                                   + GG+++ + V E    +   
Sbjct: 66  IAGTGE---------------------------------SMGGHATLVTVPEDQVVRKPA 92

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
                 A  L    +TV     R  + +    L     GG G MAV+  +  G    + +
Sbjct: 93  SLSFEEACALPVVFLTVIDAFARAGLAKGEHILIQTATGGTGLMAVQLARLKG--AEIYA 150

Query: 212 TSTS-KKEEALSLLGADKFV--VSSDLEQ-MKAL--GKSLDFIIDTASGDH 256
           T++S  K E L  LG    +  V  D E+ +  L  G+ +D +I+T SG+ 
Sbjct: 151 TASSDDKLEYLKQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGEA 201

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303

>gnl|CDD|176243 cd08283, FDH_like_1, Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

 Score = 63.3 bits (155), Expect = 4e-11
 Identities = 27/84 (32%), Positives = 40/84 (47%), Gaps = 1/84 (1%)

Query: 34  SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93
             D  + +T   +C +D+          K   + GHE +G+V+EVG  V   KVGD V V
Sbjct: 25  PTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDRV-V 83

Query: 94  GTYVNSCRDCEYCNDGLEVHCARS 117
             +  +C +C YC  GL   C  +
Sbjct: 84  VPFTIACGECFYCKRGLYSQCDNT 107

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 386

>gnl|CDD|178341 PLN02740, PLN02740, Alcohol dehydrogenase-like

 Score = 63.3 bits (154), Expect = 4e-11
 Identities = 67/275 (24%), Positives = 110/275 (40%), Gaps = 28/275 (10%)

Query: 36  DVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           +V I I +  +C+ D+  W         YP + GHE  GIV+ VG  V   K GDHV + 
Sbjct: 37  EVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVEDLKAGDHV-IP 95

Query: 95  TYVNSCRDCEYCNDGLEVHCAR-SVYTFNAI-DADG----TITKGG-----------YSS 137
            +   C DC YC       C    V  F ++   DG    +    G           ++ 
Sbjct: 96  IFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTE 155

Query: 138 YIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN-QPGKSLGVIGLGGLGHMA 196
           Y V+      KI  + PL   + L C G++       +  N Q G S+ + GLG +G   
Sbjct: 156 YTVLDSACVVKIDPNAPLKKMSLLSC-GVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAV 214

Query: 197 VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ------MKALGKSLDFIID 250
            +  +A G +  +      +K E    +G   F+   D ++       +  G  +D+  +
Sbjct: 215 AEGARARGASKIIGVDINPEKFEKGKEMGITDFINPKDSDKPVHERIREMTGGGVDYSFE 274

Query: 251 -TASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP 284
              + +   +A++S     G+ VL+G     K  P
Sbjct: 275 CAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLP 309

Length = 381

>gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

 Score = 61.5 bits (150), Expect = 7e-11
 Identities = 53/238 (22%), Positives = 85/238 (35%), Gaps = 60/238 (25%)

Query: 49  ADVIWTRNKHGDSKY--PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYC 106
            D        G  K   PL PG+  VG V EVG  V+ FK GD V             +C
Sbjct: 4   LDTALEGLSTGTEKLPLPLPPGYSSVGRVVEVGSGVTGFKPGDRV-------------FC 50

Query: 107 NDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI 166
                                     G ++  +VV       + +  P   A        
Sbjct: 51  F-------------------------GPHAERVVVPANLLVPLPDGLPPERA-------- 77

Query: 167 TVYTPMMRHKMN-------QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKE 218
              T +    +N       + G+ + V+GLG +G +A +  KA G   V  +    +++E
Sbjct: 78  -ALTALAATALNGVRDAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARRE 136

Query: 219 EALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGF 276
            A +L  AD     +     +  G+  D +I+ +      +  + LL+  G  VLVG+
Sbjct: 137 LAEALGPADP---VAADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVGW 191

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277

>gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase

 Score = 61.3 bits (150), Expect = 1e-10
 Identities = 66/320 (20%), Positives = 120/320 (37%), Gaps = 76/320 (23%)

Query: 39  ITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN 98
           I +   G+ + DV+     +       V G E  G+V  VG  V+   VGD V       
Sbjct: 1   IEVRAAGLNFRDVLIALGLYPG---EAVLGGECAGVVTRVGPGVTGLAVGDRVMG----- 52

Query: 99  SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA 158
                                          +  G +++ +V   R    I + +    A
Sbjct: 53  -------------------------------LAPGAFATRVVTDARLVVPIPDGWSFEEA 81

Query: 159 APLLCAGITVYTPMMRHKMNQPGKSLGVI--GLGGLGHMAVKFGKAFGLNV--TVLSTST 214
           A +    +T Y  ++     +PG+S+ +I    GG+G  A++  +  G  V  T     +
Sbjct: 82  ATVPVVFLTAYYALVDLARLRPGESV-LIHAAAGGVGQAAIQLARHLGAEVFATA---GS 137

Query: 215 SKKEEALSLLG-ADKFVVSS-DL---EQMKAL--GKSLDFIIDTASGDHPFDAYMSLLKV 267
            +K + L  LG  D  + SS DL   +++     G+ +D ++++ SG+   DA +  L  
Sbjct: 138 PEKRDFLRALGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLSGEF-LDASLRCLAP 196

Query: 268 AGVYVLVG-----FPSKVKFSPASLNIG-----------GTKDTQEML----EYCAAHKI 307
            G +V +G       S++  +P   N+            G    +E+L    E  A   +
Sbjct: 197 GGRFVEIGKRDIRDNSQLAMAPFRPNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVL 256

Query: 308 YP-QIETIPIENVNEALERL 326
            P  +   PI +  +A   +
Sbjct: 257 RPLPVTVFPISDAEDAFRYM 276

Enoylreductase in Polyketide synthases. Length = 287

>gnl|CDD|176247 cd08287, FDH_like_ADH3, formaldehyde dehydrogenase (FDH)-like

 Score = 61.2 bits (149), Expect = 2e-10
 Identities = 32/109 (29%), Positives = 46/109 (42%), Gaps = 13/109 (11%)

Query: 35  DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
            D  I +    VC +D+   R     ++ P   GHE VG+V+EVG  V+  K GD V + 
Sbjct: 26  TDAVIRVVATCVCGSDLWPYRG-VSPTRAPAPIGHEFVGVVEEVGSEVTSVKPGDFV-IA 83

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAID-----------ADGTITK 132
            +  S   C +C  G    C    +    +D           ADGT+ K
Sbjct: 84  PFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVK 132

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 345

>gnl|CDD|176214 cd08252, AL_MDR, Arginate lyase and other MDR family members

 Score = 60.6 bits (148), Expect = 2e-10
 Identities = 62/232 (26%), Positives = 97/232 (41%), Gaps = 53/232 (22%)

Query: 50  DVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDG 109
           D             P + G +  G+V+ VG  V+ FKVGD V                  
Sbjct: 46  DTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEV------------------ 87

Query: 110 LEVHCARSVYTFNAIDADGTITK-GGYSSYIVVHERYCYKIAN--DYPLALAAPLLCAGI 166
                      + A    G IT+ G  + Y +V ER          +  A A PL    +
Sbjct: 88  -----------YYA----GDITRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPL--TSL 130

Query: 167 TVYTPMM-RHKMNQP----GKSLGVI-GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKE-- 218
           T +  +  R  +++     GK+L +I G GG+G +A++  K     +TV++T  S+ E  
Sbjct: 131 TAWEALFDRLGISEDAENEGKTLLIIGGAGGVGSIAIQLAKQLT-GLTVIAT-ASRPESI 188

Query: 219 EALSLLGADKFVV--SSDL-EQMKALG-KSLDFIIDTASGDHPFDAYMSLLK 266
             +  LGAD  V+    DL EQ++ALG + +D+I      D  +DA   L+ 
Sbjct: 189 AWVKELGAD-HVINHHQDLAEQLEALGIEPVDYIFCLTDTDQHWDAMAELIA 239

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 336

>gnl|CDD|182229 PRK10083, PRK10083, putative oxidoreductase; Provisional

 Score = 59.8 bits (145), Expect = 5e-10
 Identities = 36/124 (29%), Positives = 54/124 (43%), Gaps = 8/124 (6%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V + +   G+C +D    R  +  +KYP V GHE  G++  VG  V   ++G+ V V  
Sbjct: 26  EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERVAVDP 85

Query: 96  YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPL 155
            V SC  C  C+ G    C   V         G    GG+S Y VV  +  ++I +    
Sbjct: 86  -VISCGHCYPCSIGKPNVCTSLVVL-------GVHRDGGFSEYAVVPAKNAHRIPDAIAD 137

Query: 156 ALAA 159
             A 
Sbjct: 138 QYAV 141

Length = 339

>gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase

 Score = 59.4 bits (144), Expect = 7e-10
 Identities = 57/226 (25%), Positives = 86/226 (38%), Gaps = 37/226 (16%)

Query: 32  VGSDDVSITITHCGVCY----------ADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN 81
           +G  +V + +   GV Y                R + G  +   + G +  GIV  VG  
Sbjct: 40  LGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEG 99

Query: 82  VSRFKVGDHVGVGTYVNSCRDCEYCN--DGLEVHCARSVYTFNAIDADGTI-----TKGG 134
           V  +KVGD V V           +C+  DG +   A     F   D    I       G 
Sbjct: 100 VKNWKVGDEVVV-----------HCSVWDGNDPERAGGDPMF---DPSQRIWGYETNYGS 145

Query: 135 YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ--PGKSLGVIG-LGG 191
           ++ + +V                AA  +  G T Y  +     N   PG ++ + G  GG
Sbjct: 146 FAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGG 205

Query: 192 LGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE 236
           LG MA++  +A G N V V+S S  K E   + LGA+  +   D +
Sbjct: 206 LGSMAIQLARAAGANPVAVVS-SEEKAEYCRA-LGAEGVINRRDFD 249

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393

>gnl|CDD|176218 cd08256, Zn_ADH2, Alcohol dehydrogenases of the MDR family

 Score = 58.6 bits (142), Expect = 1e-09
 Identities = 42/151 (27%), Positives = 63/151 (41%), Gaps = 29/151 (19%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKY------------PLVPGHEIVGIVKEVGH 80
           G  ++ + +  CG+C  D    +  HG   +            P++PGHE VG V E+G 
Sbjct: 23  GPGEILVKVEACGICAGD---IKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGE 79

Query: 81  NVSR--FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDADGTITKGGYSS 137
                  KVGD V +   +  C +C +CN G    C +  +Y F           GG + 
Sbjct: 80  GAEERGVKVGDRV-ISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQ------NNVNGGMAE 132

Query: 138 YIVV-HERYCYKIANDYPL---ALAAPLLCA 164
           Y+    E   +K+ +D P     L  PL CA
Sbjct: 133 YMRFPKEAIVHKVPDDIPPEDAILIEPLACA 163

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 350

>gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional

 Score = 58.5 bits (142), Expect = 1e-09
 Identities = 82/333 (24%), Positives = 136/333 (40%), Gaps = 79/333 (23%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH------EIVGIVKEVGHNVSR 84
           A   +DV I ++  GV  AD +    + G  KYP  PG       E+ G V++VG +V R
Sbjct: 25  APKRNDVLIKVSAAGVNRADTL---QRQG--KYPPPPGSSEILGLEVAGYVEDVGSDVKR 79

Query: 85  FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER 144
           FK GD V                                      +  GGY+ Y V H+ 
Sbjct: 80  FKEGDRVM-----------------------------------ALLPGGGYAEYAVAHKG 104

Query: 145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAF 203
           +   I   Y    AA +  A +T +  + +H   + G+S+ +  G  G+G  A +  + +
Sbjct: 105 HVMHIPQGYTFEEAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKY 164

Query: 204 GLNVTVLSTSTSKKEEALSLLGADKFVVSSD----LEQMKAL--GKSLDFIIDTASGDHP 257
           G   T+++TS+ +K +    L A   +   D      ++K L   K ++ ++D   G + 
Sbjct: 165 GAA-TIITTSSEEKVDFCKKLAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSY- 222

Query: 258 FDAYMSLLKVAGVYVLVGF--PSKV-KFSPASL-----NIGGTK-----D---------- 294
                 +L V G +++ GF   +KV KF+   L     +I  +      D          
Sbjct: 223 LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASF 282

Query: 295 TQEMLEYCAAHKIYPQIE-TIPIENVNEALERL 326
            +E+L Y    +I P ++ T P+E V EA   L
Sbjct: 283 EREVLPYMEEGEIKPIVDRTYPLEEVAEAHTFL 315

Length = 334

>gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases

 Score = 58.1 bits (141), Expect = 2e-09
 Identities = 63/258 (24%), Positives = 93/258 (36%), Gaps = 45/258 (17%)

Query: 35  DDVSITITHCGVCYADVIWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
            DV I + +  V Y D + +    G    +YP +PG ++ G V E      RFK GD V 
Sbjct: 28  GDVLIRVAYSSVNYKDGLASI-PGGKIVKRYPFIPGIDLAGTVVESND--PRFKPGDEVI 84

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAND 152
           V +Y             L                 G    GGYS Y  V   +   +   
Sbjct: 85  VTSY------------DL-----------------GVSHHGGYSEYARVPAEWVVPLPKG 115

Query: 153 YPLALAAPLLCAGIT----VYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNV 207
             L  A  L  AG T    ++  +  + +      + V G  GG+G +AV      G  V
Sbjct: 116 LTLKEAMILGTAGFTAALSIHR-LEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEV 174

Query: 208 TVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALGKSL-DFIIDTASGDHPFDAYMSL 264
            V ST  +   + L  LGA + +   +L  E +K L K      +D   G       +S 
Sbjct: 175 -VASTGKADAADYLKKLGAKEVIPREELQEESIKPLEKQRWAGAVDPVGGKT-LAYLLST 232

Query: 265 LKVAGVYVLVGFPSKVKF 282
           L+  G   + G     + 
Sbjct: 233 LQYGGSVAVSGLTGGGEV 250

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326

>gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase

 Score = 57.9 bits (140), Expect = 2e-09
 Identities = 54/221 (24%), Positives = 87/221 (39%), Gaps = 44/221 (19%)

Query: 32  VGSDDVSITITHCGVCYADVIWT-----------RNKHGDSKYPL-VPGHEIVGIVKEVG 79
           +G  +V + +   GV Y +V W              K+G    P  + G +  G+V  VG
Sbjct: 35  LGPGEVLVAVMAAGVNYNNV-WAALGEPVSTFAFLRKYGKLDLPFHIIGSDASGVVWRVG 93

Query: 80  HNVSRFKVGDHVGVGTYVNSC----RDCEYCNDGLEVHCA-RSVYTFNAIDADGTITKGG 134
             V+R+KVGD V     V SC           DG  +  + + ++ +           G 
Sbjct: 94  PGVTRWKVGDEV-----VASCLQVDLTAPDGRDGDPMLSSEQRIWGYETNF-------GS 141

Query: 135 YSSYIVVHERYCYKIANDYPLAL-----AAPLLCAGITVYTPMMRHKMN--QPGKSLGVI 187
           ++ + +V +          P  L     A P L    T Y  ++       +PG ++ + 
Sbjct: 142 FAEFALVKDYQLMP----KPKHLTWEEAACPGLTGA-TAYRQLVGWNPAAVKPGDNVLIW 196

Query: 188 GL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD 227
           G  GGLG  A +  +A G N   + +S  K E   S LGA+
Sbjct: 197 GAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCRS-LGAE 236

The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398

>gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR)

 Score = 57.6 bits (140), Expect = 2e-09
 Identities = 75/303 (24%), Positives = 116/303 (38%), Gaps = 74/303 (24%)

Query: 52  IWTRNKHGDS-KYPLVPGHEIVGIVKEVGHNVSRFKVGDHV-----GVGTYVNSCRDCEY 105
           I+TR  H  S K+P V G E VG V+E       F  G  V     G+G           
Sbjct: 44  IFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGGMGR---------- 91

Query: 106 CNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG 165
                         TF+          G Y+ Y +V     Y I +D   A  A L    
Sbjct: 92  --------------TFD----------GSYAEYTLVPNEQVYAIDSDLSWAELAALPETY 127

Query: 166 ITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSL 223
            T +  + R    QPG +L + G    +G  A+K  KA G   TV +T+ S ++   L  
Sbjct: 128 YTAWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGA--TVTATTRSPERAALLKE 185

Query: 224 LGADKFVV--SSDLEQMKALGKSLDFIID---TASGDHPFDAYMSLLKVAGVYVLVG--- 275
           LGAD+ V+   +  EQ++A     D +++   TA+     D+ +  L+  G+  + G   
Sbjct: 186 LGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTATLK---DS-LRHLRPGGIVCMTGLLG 241

Query: 276 -------------FPSKVKFSPASLNIGGTKDT--QEMLEYCAAHKIYPQI-ETIPIENV 319
                         PS V  +    + G    T  QE+ ++ AA  +     +    + +
Sbjct: 242 GQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFDEI 301

Query: 320 NEA 322
            EA
Sbjct: 302 VEA 304

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320

>gnl|CDD|215442 PLN02827, PLN02827, Alcohol dehydrogenase-like

 Score = 56.4 bits (136), Expect = 7e-09
 Identities = 50/225 (22%), Positives = 82/225 (36%), Gaps = 36/225 (16%)

Query: 36  DVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           ++ I +    +C +D+  W       + +P + GHE  GIV+ +G  V+ F+ GDHV + 
Sbjct: 39  EIRIKVVSTSLCRSDLSAWESQ----ALFPRIFGHEASGIVESIGEGVTEFEKGDHV-LT 93

Query: 95  TYVNSCRDCEYCNDGLEVHC----------------------ARSVYTFNAIDADGTITK 132
            +   C  C +C  G    C                       + VY + A+ +      
Sbjct: 94  VFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSS------ 147

Query: 133 GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGL 192
             +S Y VVH     K+    PL     L C                 G S+ + GLG +
Sbjct: 148 --FSEYTVVHSGCAVKVDPLAPLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTV 205

Query: 193 GHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
           G    +  K  G +  +      +K E     G   F+  +DL +
Sbjct: 206 GLSVAQGAKLRGASQIIGVDINPEKAEKAKTFGVTDFINPNDLSE 250

Length = 378

>gnl|CDD|176245 cd08285, NADP_ADH, NADP(H)-dependent alcohol dehydrogenases

 Score = 56.1 bits (136), Expect = 7e-09
 Identities = 64/261 (24%), Positives = 93/261 (35%), Gaps = 37/261 (14%)

Query: 29  RRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
               G +D  +  T    C +DV          ++ ++ GHE VG+V+EVG  V  FK G
Sbjct: 19  IPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPG 78

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHC--ARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
           D V V   +           G           + F           G ++ Y  V     
Sbjct: 79  DRVIVPA-ITPDWRSVAAQRGYPSQSGGMLGGWKF------SNFKDGVFAEYFHV----- 126

Query: 147 YKIANDYPLALAAPLLCAGIT----VYTP-MM-------RHKMNQPGKSLGVIGLGGLGH 194
               ND    LA   L  G+T    V  P MM            + G ++ V G+G +G 
Sbjct: 127 ----NDADANLA--PLPDGLTDEQAVMLPDMMSTGFHGAELANIKLGDTVAVFGIGPVGL 180

Query: 195 MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKAL--GKSLDFII 249
           MAV   +  G    +   S   + E     GA   V       +EQ+  L  GK +D +I
Sbjct: 181 MAVAGARLRGAGRIIAVGSRPNRVELAKEYGATDIVDYKNGDVVEQILKLTGGKGVDAVI 240

Query: 250 DTASGDHPFDAYMSLLKVAGV 270
               G   F+  + +LK  G 
Sbjct: 241 IAGGGQDTFEQALKVLKPGGT 261

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 351

>gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members

 Score = 55.3 bits (134), Expect = 1e-08
 Identities = 64/252 (25%), Positives = 103/252 (40%), Gaps = 46/252 (18%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKH-GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G  +V +     G+  +D+ +T  ++    K P   G E VG V  VG  V+ FKVGD V
Sbjct: 29  GPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTDFKVGDAV 88

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                                                T++ G ++ Y VV  R+   +  
Sbjct: 89  A------------------------------------TMSFGAFAEYQVVPARHAVPVPE 112

Query: 152 DYPLALAAPLLCAGITVYTPM-MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVL 210
             P  L  PLL +G+T    +    +M      L     GG G  AV+  K  G +V + 
Sbjct: 113 LKPEVL--PLLVSGLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHV-IG 169

Query: 211 STSTSKKEEALSLLGADKFVV--SSDLEQ--MKALGKSLDFIIDTASGDHPFDAYMSLLK 266
           + S+ +K E L  LG D+ +   + DL +   K   K +D + ++  G+  FD  +  L 
Sbjct: 170 TCSSDEKAEFLKSLGCDRPINYKTEDLGEVLKKEYPKGVDVVYESVGGEM-FDTCVDNLA 228

Query: 267 VAGVYVLVGFPS 278
           + G  +++GF S
Sbjct: 229 LKGRLIVIGFIS 240

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329

>gnl|CDD|234024 TIGR02817, adh_fam_1, zinc-binding alcohol dehydrogenase family protein

 Score = 52.4 bits (126), Expect = 1e-07
 Identities = 56/233 (24%), Positives = 97/233 (41%), Gaps = 47/233 (20%)

Query: 64  PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA 123
           P + G +  G+V  VG  V+ FK GD V                             + A
Sbjct: 59  PKILGWDAAGVVVAVGDEVTLFKPGDEV-----------------------------WYA 89

Query: 124 IDADGTITK-GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM-RHKMNQPG 181
               G I + G  + + +V ER           A AA L    IT +  +  R  +N P 
Sbjct: 90  ----GDIDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRLGINDPV 145

Query: 182 ----KSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL-LGADKFVV--SS 233
               ++L +IG  GG+G + ++  +     +TV++T++  + +   L LGA   V+  S 
Sbjct: 146 AGDKRALLIIGGAGGVGSILIQLARQLT-GLTVIATASRPESQEWVLELGAH-HVIDHSK 203

Query: 234 DL-EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP 284
            L  Q++ LG +++ ++      D  F   + LL   G + L+  P+++  SP
Sbjct: 204 PLKAQLEKLGLEAVSYVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISP 256

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model [Energy metabolism, Fermentation]. Length = 336

>gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR)

 Score = 52.6 bits (127), Expect = 1e-07
 Identities = 53/240 (22%), Positives = 71/240 (29%), Gaps = 72/240 (30%)

Query: 64  PLVPGHEIVGIVKEVGHNVSRFKVGDHV-----GVGTYVNSCRDCEYCNDGLEVHCARSV 118
           P V G+E VG V +VG  V   K GD V     G+GT                       
Sbjct: 64  PAVGGNEGVGEVVKVGSGVKSLKPGDWVIPLRPGLGT----------------------- 100

Query: 119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178
                           + ++ VV      K+ ND     AA L     T Y   +     
Sbjct: 101 ----------------WRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAY--RLLEDFV 142

Query: 179 --QPGKSLGVI---GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFV 230
             QPG    VI       +G   ++  K  G+    +       EE    L  LGAD  +
Sbjct: 143 KLQPGDW--VIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLKALGADHVL 200

Query: 231 VSSDL------EQMKALGKS-----LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK 279
              +L      E +K+         L+       G         LL   G  V  G  S 
Sbjct: 201 TEEELRSLLATELLKSAPGGRPKLALN-----CVGGKSATELARLLSPGGTMVTYGGMSG 255

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341

>gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like

 Score = 52.3 bits (126), Expect = 1e-07
 Identities = 50/237 (21%), Positives = 75/237 (31%), Gaps = 53/237 (22%)

Query: 63  YPLVPGHEIVGIVKEVGHNVSRFKVGDHV----GVGTYVNSCRDCEYCNDGLEVHCARSV 118
            P VPG+E VG+V EVG  VS   VG  V    G GT                       
Sbjct: 56  LPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGT----------------------- 92

Query: 119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178
                           +  Y+V        + +      AA L    +T +  +  +   
Sbjct: 93  ----------------WQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKL 136

Query: 179 QPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
            PG  +        +G M ++  K  G     +     + EE L  LGAD+ + SS  + 
Sbjct: 137 PPGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEE-LKALGADEVIDSSPEDL 195

Query: 238 MKAL-----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL 287
            + +     G      +D   G+         L+  G  V  G  S   V F  +  
Sbjct: 196 AQRVKEATGGAGARLALDAVGGES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVF 251

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323

>gnl|CDD|176242 cd08282, PFDH_like, Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

 Score = 52.2 bits (126), Expect = 1e-07
 Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 7/102 (6%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93
           D  + IT   +C +D+       G +  +  LV GHE +G V+EVG  V   KVGD V V
Sbjct: 27  DAIVRITTTAICGSDL---HMYRGRTGAEPGLVLGHEAMGEVEEVGSAVESLKVGDRVVV 83

Query: 94  GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGY 135
             +  +C  C  C  GL   C  +V    A  A G +  G Y
Sbjct: 84  -PFNVACGRCRNCKRGLTGVCL-TVNPGRAGGAYGYVDMGPY 123

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 375

>gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases

 Score = 50.2 bits (121), Expect = 6e-07
 Identities = 55/206 (26%), Positives = 75/206 (36%), Gaps = 47/206 (22%)

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
            YP  PG +  G V        RF+ GD V V  Y             L           
Sbjct: 56  NYPHTPGIDAAGTVVSSDDP--RFREGDEVLVTGY------------DL----------- 90

Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG 181
                 G  T GG++ Y+ V   +   +     L  A  L  AG T    +  H++   G
Sbjct: 91  ------GMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFT--AALSVHRLEDNG 142

Query: 182 KS--LGVI----GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA--LSLLGADKFVVSS 233
           ++   G +      GG+G +AV      G  V  L   T K+E+A  L  LGA + +   
Sbjct: 143 QTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVAL---TGKEEQADYLKSLGASEVLDRE 199

Query: 234 DLEQM--KALGKSL-DFIIDTASGDH 256
           DL     K L K+     IDT  GD 
Sbjct: 200 DLLDESKKPLLKARWAGAIDTVGGDV 225

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325

>gnl|CDD|176223 cd08262, Zn_ADH8, Alcohol dehydrogenases of the MDR family

 Score = 48.8 bits (117), Expect = 2e-06
 Identities = 71/349 (20%), Positives = 115/349 (32%), Gaps = 94/349 (26%)

Query: 44  CGVCYADVIWTRNKH-----------GDSKYPLVPGHEIVGIVKEVGHNVS-RFKVGDHV 91
           CG+C +D+  T +              D    +V GHE  G V + G     + KVG  V
Sbjct: 33  CGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGPGTERKLKVGTRV 92

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                +  C     C  GL                      GGY+ Y+++ E    ++ +
Sbjct: 93  TSLPLL-LCGQGASCGIGL-----------------SPEAPGGYAEYMLLSEALLLRVPD 134

Query: 152 DYPLALAA---PLLCAGITVYTPMMRHKMN----QPGKSLGVIGLGGLGHMAVKFGKAFG 204
              +  AA   PL             H +      PG+   VIG G +G   +   KA G
Sbjct: 135 GLSMEDAALTEPLAVG---------LHAVRRARLTPGEVALVIGCGPIGLAVIAALKARG 185

Query: 205 LNVTVLSTSTSKKEEALSLLGADKFVV--------SSDLEQMKALGKS------------ 244
           +   V S  + ++      +GAD  V         +   E  +A G              
Sbjct: 186 VGPIVASDFSPERRALALAMGADIVVDPAADSPFAAWAAELARAGGPKPAVIFECVGAPG 245

Query: 245 -LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGF-PSKVKFSPA-----SLNI----GGTK 293
            +  II+ A    P    +         V+VG         PA      L +    G T 
Sbjct: 246 LIQQIIEGA----PPGGRI---------VVVGVCMESDNIEPALAIRKELTLQFSLGYTP 292

Query: 294 -DTQEMLEYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID 338
            +  + L+  A  K+        T+ ++ V +A E L   +   + ++D
Sbjct: 293 EEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341

>gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family

 Score = 47.6 bits (114), Expect = 5e-06
 Identities = 68/253 (26%), Positives = 90/253 (35%), Gaps = 50/253 (19%)

Query: 36  DVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           DV I + +  + Y D +    K G    YP++PG +  G V  V     RF+ GD V V 
Sbjct: 28  DVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTV--VSSEDPRFREGDEVIVT 85

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
            Y            GL                 G    GGYS Y  V   +   +     
Sbjct: 86  GY------------GL-----------------GVSHDGGYSQYARVPADWLVPLPEGLS 116

Query: 155 LALAAPLLCAGITVYTPMM------RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNV 207
           L  A  L  AG   +T  +      R+ +      + V G  GG+G +AV      G  V
Sbjct: 117 LREAMALGTAG---FTAALSVMALERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEV 173

Query: 208 TVLSTSTSKKEEA--LSLLGADKFVVSSDLEQ-MKALGKSL-DFIIDTASGDHPFDAYMS 263
                ST K EE   L  LGA + +   DL    K L K      +DT  G H     ++
Sbjct: 174 V---ASTGKAEEEDYLKELGASEVIDREDLSPPGKPLEKERWAGAVDTV-GGHTLANVLA 229

Query: 264 LLKVAGVYVLVGF 276
            LK  G     G 
Sbjct: 230 QLKYGGAVAACGL 242

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323

>gnl|CDD|240646 cd12169, PGDH_like_1, Putative D-3-Phosphoglycerate Dehydrogenases

 Score = 45.6 bits (109), Expect = 1e-05
 Identities = 17/50 (34%), Positives = 29/50 (58%), Gaps = 2/50 (4%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV 230
           GK+LG++GLG +G    + G+AFG+ V   S++ +   E  +  G +  V
Sbjct: 142 GKTLGIVGLGRIGARVARIGQAFGMRVIAWSSNLT--AERAAAAGVEAAV 189

Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric. Length = 308

>gnl|CDD|234025 TIGR02819, fdhA_non_GSH, formaldehyde dehydrogenase, glutathione-independent

 Score = 45.2 bits (107), Expect = 3e-05
 Identities = 31/81 (38%), Positives = 44/81 (54%), Gaps = 6/81 (7%)

Query: 65  LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV--NSCRDCEYCNDG--LEVHCARSVYT 120
           LV GHEI G V E G +V   K+GD V V   +    CR+C+  + G  L V+ AR+   
Sbjct: 63  LVLGHEITGEVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAA 122

Query: 121 FNAIDADGTITKGGYSSYIVV 141
           +  +D  G +  GG S Y++V
Sbjct: 123 YGYVDMGGWV--GGQSEYVMV 141

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent [Central intermediary metabolism, One-carbon metabolism]. Length = 393

>gnl|CDD|183914 PRK13243, PRK13243, glyoxylate reductase; Reviewed

 Score = 44.0 bits (104), Expect = 6e-05
 Identities = 20/61 (32%), Positives = 33/61 (54%), Gaps = 2/61 (3%)

Query: 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA 226
             + P+M    +  GK++G+IG G +G    +  K FG+   +L  S ++K EA   LGA
Sbjct: 136 VAWHPLMFLGYDVYGKTIGIIGFGRIGQAVARRAKGFGMR--ILYYSRTRKPEAEKELGA 193

Query: 227 D 227
           +
Sbjct: 194 E 194

Length = 333

>gnl|CDD|223189 COG0111, SerA, Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

 Score = 43.1 bits (102), Expect = 1e-04
 Identities = 20/69 (28%), Positives = 34/69 (49%), Gaps = 8/69 (11%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GK++G+IGLG +G    K  KAFG+ V      + ++       G D  V    L+++  
Sbjct: 142 GKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRERA-----GVDGVVGVDSLDEL-- 194

Query: 241 LGKSLDFII 249
           L ++ D + 
Sbjct: 195 LAEA-DILT 202

Length = 324

>gnl|CDD|130269 TIGR01202, bchC, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

 Score = 42.9 bits (101), Expect = 1e-04
 Identities = 60/235 (25%), Positives = 83/235 (35%), Gaps = 60/235 (25%)

Query: 63  YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN 122
           YPLVPG+E VG V E G +   F+ GD V    +V        C + +     R ++   
Sbjct: 58  YPLVPGYESVGRVVEAGPDTG-FRPGDRV----FVPGSN----CYEDV-----RGLF--- 100

Query: 123 AIDADGTITKGGYSSYIVVH-ERYCY--KIAND----YPLALAAPLLCAGITVYTPMMRH 175
                     GG S  +V    R C              LA  A    AG  V       
Sbjct: 101 ----------GGASKRLVTPASRVCRLDPALGPQGALLALAATARHAVAGAEVKVL---- 146

Query: 176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSD 234
                   L ++G G LG +  +  KA G +   V  T+  +++ A         V+  +
Sbjct: 147 ------PDL-IVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGATGYE-----VLDPE 194

Query: 235 LEQMKALGKSLDFIIDTASGDHP-FDAYMSLLKVAGVYVLVGF---PSKVKFSPA 285
            +      +    I D ASGD    D  +  L   G  VL GF   P    F PA
Sbjct: 195 KDP----RRDYRAIYD-ASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPA 244

[Biosynthesis of cofactors, prosthetic groups, and carriers, Chlorophyll and bacteriochlorphyll]. Length = 308

>gnl|CDD|240651 cd12174, PGDH_like_3, Putative D-3-Phosphoglycerate Dehydrogenases, NAD-binding and catalytic domains

 Score = 40.6 bits (96), Expect = 6e-04
 Identities = 22/69 (31%), Positives = 31/69 (44%), Gaps = 6/69 (8%)

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
            GK+LGVIGLG +G +      A G+ V       S  E A  L    + V S     ++
Sbjct: 134 RGKTLGVIGLGNIGRLVANAALALGMKVIGYDPYLS-VEAAWKLSVEVQRVTS-----LE 187

Query: 240 ALGKSLDFI 248
            L  + D+I
Sbjct: 188 ELLATADYI 196

Phosphoglycerate dehydrogenases (PGDHs) catalyze the initial step in the biosynthesis of L-serine from D-3-phosphoglycerate. PGDHs come in 3 distinct structural forms, with this first group being related to 2-hydroxy acid dehydrogenases, sharing structural similarity to formate and glycerate dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily, which also include groups such as L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Many, not all, members of this family are dimeric. Length = 305

>gnl|CDD|217244 pfam02826, 2-Hacid_dh_C, D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain

 Score = 39.8 bits (94), Expect = 6e-04
 Identities = 16/41 (39%), Positives = 23/41 (56%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL 221
           GK++G+IGLG +G    +  KAFG+ V         + EAL
Sbjct: 35  GKTVGIIGLGRIGRAVARRLKAFGMKVIAYDRYPKAEAEAL 75

This domain is inserted into the catalytic domain, the large dehydrogenase and D-lactate dehydrogenase families in SCOP. N-terminal portion of which is represented by family pfam00389. Length = 175

>gnl|CDD|240626 cd05301, GDH, D-glycerate dehydrogenase/hydroxypyruvate reductase (GDH)

 Score = 39.7 bits (94), Expect = 0.001
 Identities = 24/69 (34%), Positives = 41/69 (59%), Gaps = 9/69 (13%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GK+LG++G+G +G    +  K FG+   +L  + S+K EA   LGA ++V    L+++  
Sbjct: 144 GKTLGIVGMGRIGQAVARRAKGFGMK--ILYHNRSRKPEAEEELGA-RYV---SLDEL-- 195

Query: 241 LGKSLDFII 249
           L +S DF+ 
Sbjct: 196 LAES-DFVS 203

D-glycerate dehydrogenase (GDH, also known as hydroxypyruvate reductase, HPR) catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. In humans, HPR deficiency causes primary hyperoxaluria type 2, characterized by over-excretion of L-glycerate and oxalate in the urine, possibly due to an imbalance in competition with L-lactate dehydrogenase, another formate dehydrogenase (FDH)-like enzyme. GDH, like FDH and other members of the D-specific hydroxyacid dehydrogenase family that also includes L-alanine dehydrogenase and S-adenosylhomocysteine hydrolase, typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form, despite often low sequence identity. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 309

>gnl|CDD|240638 cd12161, GDH_like_1, Putative glycerate dehydrogenase and related proteins of the D-specific 2-hydroxy dehydrogenase family

 Score = 39.5 bits (93), Expect = 0.001
 Identities = 19/43 (44%), Positives = 28/43 (65%), Gaps = 2/43 (4%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL 223
           GK++G++G G +G    +  KAFG    VL+ S S+KEEA +L
Sbjct: 144 GKTVGIVGTGAIGLRVARLFKAFGCK--VLAYSRSEKEEAKAL 184

This group contains a variety of proteins variously identified as glycerate dehydrogenase (GDH, aka Hydroxypyruvate Reductase) and other enzymes of the 2-hydroxyacid dehydrogenase family. GDH catalyzes the reversible reaction of (R)-glycerate + NAD+ to hydroxypyruvate + NADH + H+. 2-hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 315

>gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

 Score = 39.7 bits (93), Expect = 0.002
 Identities = 55/209 (26%), Positives = 84/209 (40%), Gaps = 35/209 (16%)

Query: 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLG----VIGL-GGLGHMAVKFGKAFGLNVTV 209
            A AA L  AG+T         + + G  LG    V G  GG+G  AV+     G +V  
Sbjct: 108 FAQAATLPVAGVTAL-----RALRRGGPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVA 162

Query: 210 LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAG 269
           +  S ++ E    L  A+  V  S+L      G  +D ++D+  G       + LL   G
Sbjct: 163 VVGSPARAEGLRELGAAEVVVGGSELS-----GAPVDLVVDSVGGPQ-LARALELLAPGG 216

Query: 270 VYVLVGFPS--KVKFSPASLNIGG----------------TKDTQEMLEYCAAHKIYPQI 311
             V VG  S     F+PA+   GG                  D   +L   AA ++ P+I
Sbjct: 217 TVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRI 276

Query: 312 E-TIPIENVNEALERLIKRDVKYRFVIDI 339
                   ++EA E L+ R  + + V+D+
Sbjct: 277 GWRGSWTEIDEAAEALLARRFRGKAVLDV 305

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305

>gnl|CDD|240632 cd12155, PGDH_1, Phosphoglycerate Dehydrogenase, 2-hydroxyacid dehydrogenase family

 Score = 39.5 bits (93), Expect = 0.002
 Identities = 27/100 (27%), Positives = 46/100 (46%), Gaps = 14/100 (14%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           GK++  +G G +G    K  KAFG+ V  ++TS    E        DK     +L+++  
Sbjct: 135 GKTILFLGTGSIGQEIAKRLKAFGMKVIGVNTSGRDVE------YFDKCYPLEELDEVL- 187

Query: 241 LGKSLDFIID----TASGDHPFD-AYMSLLKVAGVYVLVG 275
             K  D +++    T    H FD A+   +K   +++ VG
Sbjct: 188 --KEADIVVNVLPLTEETHHLFDEAFFEQMKKGALFINVG 225

Phosphoglycerate Dehydrogenase (PGDH) catalyzes the NAD-dependent conversion of 3-phosphoglycerate into 3-phosphohydroxypyruvate, which is the first step in serine biosynthesis. Over-expression of PGDH has been implicated as supporting proliferation of certain breast cancers, while PGDH deficiency is linked to defects in mammalian central nervous system development. PGDH is a member of the 2-hydroxyacid dehydrogenase family, enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann-fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 314

>gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases

 Score = 39.4 bits (93), Expect = 0.002
 Identities = 54/210 (25%), Positives = 74/210 (35%), Gaps = 58/210 (27%)

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHV-----GVGTYVNSCRDCEYCNDGLEVHCAR 116
            +PLVPG ++ G V E      RFK GD V     GVG                E H   
Sbjct: 56  TFPLVPGIDLAGTVVESSS--PRFKPGDRVVLTGWGVG----------------ERH--- 94

Query: 117 SVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM--- 173
                           GGY+    V   +   +        A  +  AG   +T M+   
Sbjct: 95  ---------------WGGYAQRARVKADWLVPLPEGLSARQAMAIGTAG---FTAMLCVM 136

Query: 174 ---RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA--LSLLGAD 227
               H +      + V G  GG+G +AV      G  V     ST + EEA  L  LGA 
Sbjct: 137 ALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVV---ASTGRPEEADYLRSLGAS 193

Query: 228 KFVVSSDL-EQMKALGKSL-DFIIDTASGD 255
           + +  ++L E  + L K      +DT  G 
Sbjct: 194 EIIDRAELSEPGRPLQKERWAGAVDTVGGH 223

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324

>gnl|CDD|235800 PRK06436, PRK06436, glycerate dehydrogenase; Provisional

 Score = 39.1 bits (91), Expect = 0.002
 Identities = 18/59 (30%), Positives = 27/59 (45%), Gaps = 6/59 (10%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK------EEALSLLGADKFVVSS 233
            KSLG++G GG+G       KAFG+N+   + S           E   ++    FV+ S
Sbjct: 122 NKSLGILGYGGIGRRVALLAKAFGMNIYAYTRSYVNDGISSIYMEPEDIMKKSDFVLIS 180

Length = 303

>gnl|CDD|240625 cd05300, 2-Hacid_dh_1, Putative D-isomer specific 2-hydroxyacid dehydrogenase

 Score = 38.7 bits (91), Expect = 0.003
 Identities = 17/70 (24%), Positives = 35/70 (50%), Gaps = 10/70 (14%)

Query: 181 GKSLGVIGLGGLG-HMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           GK++ ++GLG +G  +A +  KAFG+ V  +  S             D+     +L++  
Sbjct: 134 GKTVLIVGLGDIGREIARRA-KAFGMRVIGVRRSGRPAPPV-----VDEVYTPDELDE-- 185

Query: 240 ALGKSLDFII 249
            L ++ D+++
Sbjct: 186 LLPEA-DYVV 194

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomains but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of the hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Length = 313

>gnl|CDD|161904 TIGR00507, aroE, shikimate 5-dehydrogenase

 Score = 38.6 bits (90), Expect = 0.003
 Identities = 39/175 (22%), Positives = 69/175 (39%), Gaps = 18/175 (10%)

Query: 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL 224
           GI + + + +    +P +++ +IG GG              NV + + + SK EE     
Sbjct: 101 GIGLVSDLEQLIPLRPNQNVLIIGAGGAAKAVALELLKADCNVIIANRTVSKAEELAERF 160

Query: 225 ---GADKFVVSSDLEQMKALGKSLDFIID-TASGDHPFDAYMSLLK-----VAGVYVLVG 275
              G  +     +L         +D II+ T++G         +          VY LV 
Sbjct: 161 QRYGEIQAFSMDELP-----LHRVDLIINATSAGMSGNIDEPPVPAEYLKEGKLVYDLVY 215

Query: 276 FPSKVKFSPASLNIGG-TKDTQEMLEYCAAH--KIYPQIETIPIENVNEALERLI 327
            P +  F   + ++G  T D   ML Y AA   +++  +E   IE + E L  ++
Sbjct: 216 NPLETPFLAEAKSLGTKTIDGLGMLVYQAALSFELWTGVE-PDIEKMFEQLISVL 269

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain [Amino acid biosynthesis, Aromatic amino acid family]. Length = 270

>gnl|CDD|240639 cd12162, 2-Hacid_dh_4, Putative D-isomer specific 2-hydroxyacid dehydrogenases

 Score = 38.2 bits (90), Expect = 0.004
 Identities = 24/98 (24%), Positives = 39/98 (39%), Gaps = 33/98 (33%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK---------EEALSLLGADKFVV 231
           GK+LG+IG G +G    +  +AFG+ V   +               +E L+   +D  V+
Sbjct: 147 GKTLGIIGYGNIGQAVARIARAFGMKVLF-AERKGAPPLREGYVSLDELLAQ--SD--VI 201

Query: 232 S---------------SDLEQMKALGKSLDFIIDTASG 254
           S                +L +MK        +I+TA G
Sbjct: 202 SLHCPLTPETRNLINAEELAKMK---PGA-ILINTARG 235

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine yydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 307

>gnl|CDD|240642 cd12165, 2-Hacid_dh_6, Putative D-isomer specific 2-hydroxyacid dehydrogenases

 Score = 38.4 bits (90), Expect = 0.004
 Identities = 33/110 (30%), Positives = 49/110 (44%), Gaps = 22/110 (20%)

Query: 156 ALAAPLLCAG-ITVYTPMMR----HKMNQP--------GKSLGVIGLGGLGHMAVKFGKA 202
           ALA  L  A  I  Y   +R    H             GK++G++G G +G    +  KA
Sbjct: 99  ALALILALAKRIVEYDNDLRRGIWHGRAGEEPESKELRGKTVGILGYGHIGREIARLLKA 158

Query: 203 FGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTA 252
           FG+ V  +  S S KE+     GAD     SDL+  +AL ++ D ++   
Sbjct: 159 FGMRVIGV--SRSPKEDE----GADFVGTLSDLD--EALEQA-DVVVVAL 199

2-Hydroxyacid dehydrogenases catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-adenosylhomocysteine hydrolase. Despite often low sequence identity, these proteins typically have a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 314

>gnl|CDD|240622 cd05198, formate_dh_like, Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxy acid dehydrogenase family

 Score = 38.0 bits (89), Expect = 0.004
 Identities = 17/47 (36%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD 227
           GK++G++GLG +G    K  +AFG+   VL    ++K E    LG  
Sbjct: 140 GKTVGIVGLGRIGQRVAKRLQAFGMK--VLYYDRTRKPEPEEDLGFR 184

Formate dehydrogenase, D-specific 2-hydroxy acid dehydrogenase, Phosphoglycerate Dehydrogenase, Lactate dehydrogenase, Thermostable Phosphite Dehydrogenase, and Hydroxy(phenyl)pyruvate reductase, among others, share a characteristic arrangement of 2 similar subdomains of the alpha/beta Rossmann fold NAD+ binding form. 2-hydroxyacid dehydrogenases are enzymes that catalyze the conversion of a wide variety of D-2-hydroxy acids to their corresponding keto acids. The general mechanism is (R)-lactate + acceptor to pyruvate + reduced acceptor. The NAD+ binding domain is inserted within the linear sequence of the mostly N-terminal catalytic domain, which has a similar domain structure to the internal NAD binding domain. Structurally, these domains are connected by extended alpha helices and create a cleft in which NAD is bound, primarily to the C-terminal portion of the 2nd (internal) domain. Some related proteins have similar structural subdomain but with a tandem arrangement of the catalytic and NAD-binding subdomains in the linear sequence. Formate dehydrogenase (FDH) catalyzes the NAD+-dependent oxidation of formate ion to carbon dioxide with the concomitant reduction of NAD+ to NADH. FDHs of this family contain no metal ions or prosthetic groups. Catalysis occurs though direct transfer of hydride ion to NAD+ without the stages of acid-base catalysis typically found in related dehydrogenases. FDHs are found in all methylotrophic microorganisms in energy production and in the stress responses of plants. Formate/glycerate and related dehydrogenases of the D-specific 2-hydroxyacid dehydrogenase superfamily include groups such as formate dehydrogenase, glycerate dehydrogenase, L-alanine dehydrogenase, and S-Adenosylhomocysteine Hydrolase, among others. While many members of this family are dimeric, alanine DH is hexameric and phosphoglycerate DH is tetrameric. Length = 302

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	344
COG1064	339	AdhP Zn-dependent alcohol dehydrogenases [General	100.0
KOG0023	360	consensus Alcohol dehydrogenase, class V [Secondar	100.0
PLN02586	360	probable cinnamyl alcohol dehydrogenase	100.0
COG1062	366	AdhC Zn-dependent alcohol dehydrogenases, class II	100.0
KOG0024	354	consensus Sorbitol dehydrogenase [Secondary metabo	100.0
PLN02178	375	cinnamyl-alcohol dehydrogenase	100.0
PLN02514	357	cinnamyl-alcohol dehydrogenase	100.0
KOG0022	375	consensus Alcohol dehydrogenase, class III [Second	100.0
PRK09880	343	L-idonate 5-dehydrogenase; Provisional	100.0
TIGR02822	329	adh_fam_2 zinc-binding alcohol dehydrogenase famil	100.0
cd08281	371	liver_ADH_like1 Zinc-dependent alcohol dehydrogena	100.0
TIGR02818	368	adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr	100.0
cd08239	339	THR_DH_like L-threonine dehydrogenase (TDH)-like.	100.0
PLN02740	381	Alcohol dehydrogenase-like	100.0
PLN02827	378	Alcohol dehydrogenase-like	100.0
COG0604	326	Qor NADPH:quinone reductase and related Zn-depende	100.0
TIGR03451	358	mycoS_dep_FDH mycothiol-dependent formaldehyde deh	100.0
cd08300	368	alcohol_DH_class_III class III alcohol dehydrogena	100.0
cd08301	369	alcohol_DH_plants Plant alcohol dehydrogenase. NAD	100.0
cd08277	365	liver_alcohol_DH_like Liver alcohol dehydrogenase.	100.0
COG1063	350	Tdh Threonine dehydrogenase and related Zn-depende	100.0
KOG1197	336	consensus Predicted quinone oxidoreductase [Energy	100.0
TIGR03201	349	dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co	100.0
TIGR02819	393	fdhA_non_GSH formaldehyde dehydrogenase, glutathio	100.0
cd08230	355	glucose_DH Glucose dehydrogenase. Glucose dehydrog	100.0
cd08296	333	CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci	100.0
PRK10309	347	galactitol-1-phosphate dehydrogenase; Provisional	100.0
cd05283	337	CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam	100.0
cd08231	361	MDR_TM0436_like Hypothetical enzyme TM0436 resembl	100.0
cd08237	341	ribitol-5-phosphate_DH ribitol-5-phosphate dehydro	100.0
cd08233	351	butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog	100.0
cd08285	351	NADP_ADH NADP(H)-dependent alcohol dehydrogenases.	100.0
TIGR01202	308	bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl	100.0
cd08299	373	alcohol_DH_class_I_II_IV class I, II, IV alcohol d	100.0
PRK10083	339	putative oxidoreductase; Provisional	100.0
cd05284	340	arabinose_DH_like D-arabinose dehydrogenase. This	100.0
cd08278	365	benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be	100.0
PRK09422	338	ethanol-active dehydrogenase/acetaldehyde-active r	100.0
cd08238	410	sorbose_phosphate_red L-sorbose-1-phosphate reduct	100.0
cd05278	347	FDH_like Formaldehyde dehydrogenases. Formaldehyde	100.0
cd08297	341	CAD3 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08240	350	6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy	100.0
cd08246	393	crotonyl_coA_red crotonyl-CoA reductase. Crotonyl-	100.0
TIGR01751	398	crot-CoA-red crotonyl-CoA reductase. The enzyme mo	100.0
PRK13771	334	putative alcohol dehydrogenase; Provisional	100.0
cd05279	365	Zn_ADH1 Liver alcohol dehydrogenase and related zi	100.0
cd08291	324	ETR_like_1 2-enoyl thioester reductase (ETR) like	100.0
cd08256	350	Zn_ADH2 Alcohol dehydrogenases of the MDR family.	100.0
cd08279	363	Zn_ADH_class_III Class III alcohol dehydrogenase.	100.0
cd08283	386	FDH_like_1 Glutathione-dependent formaldehyde dehy	100.0
cd08298	329	CAD2 Cinnamyl alcohol dehydrogenases (CAD). These	100.0
cd08245	330	CAD Cinnamyl alcohol dehydrogenases (CAD) and rela	100.0
cd08260	345	Zn_ADH6 Alcohol dehydrogenases of the MDR family.	100.0
cd08286	345	FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik	100.0
KOG0025	354	consensus Zn2+-binding dehydrogenase (nuclear rece	100.0
cd08254	338	hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo	100.0
cd08263	367	Zn_ADH10 Alcohol dehydrogenases of the MDR family.	100.0
PRK05396	341	tdh L-threonine 3-dehydrogenase; Validated	100.0
cd08293	345	PTGR2 Prostaglandin reductase. Prostaglandins and	100.0
PLN03154	348	putative allyl alcohol dehydrogenase; Provisional	100.0
cd08284	344	FDH_like_2 Glutathione-dependent formaldehyde dehy	100.0
cd08282	375	PFDH_like Pseudomonas putida aldehyde-dismutating	100.0
cd08232	339	idonate-5-DH L-idonate 5-dehydrogenase. L-idonate	100.0
cd08259	332	Zn_ADH5 Alcohol dehydrogenases of the MDR family.	100.0
cd08261	337	Zn_ADH7 Alcohol dehydrogenases of the MDR family.	100.0
cd08265	384	Zn_ADH3 Alcohol dehydrogenases of the MDR family.	100.0
cd08264	325	Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam	100.0
cd05285	343	sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a	100.0
cd08266	342	Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam	100.0
cd08235	343	iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ	100.0
cd08242	319	MDR_like Medium chain dehydrogenases/reductase (MD	100.0
cd08292	324	ETR_like_2 2-enoyl thioester reductase (ETR) like	100.0
PLN02702	364	L-idonate 5-dehydrogenase	100.0
cd08262	341	Zn_ADH8 Alcohol dehydrogenases of the MDR family.	100.0
cd08287	345	FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik	100.0
cd08274	350	MDR9 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08295	338	double_bond_reductase_like Arabidopsis alkenal dou	100.0
TIGR02825	325	B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15	100.0
COG2130	340	Putative NADP-dependent oxidoreductases [General f	100.0
cd05281	341	TDH Threonine dehydrogenase. L-threonine dehydroge	100.0
cd08236	343	sugar_DH NAD(P)-dependent sugar dehydrogenases. Th	100.0
TIGR03366	280	HpnZ_proposed putative phosphonate catabolism asso	100.0
cd08294	329	leukotriene_B4_DH_like 13-PGR is a bifunctional en	100.0
cd08234	334	threonine_DH_like L-threonine dehydrogenase. L-thr	100.0
TIGR00692	340	tdh L-threonine 3-dehydrogenase. E. coli His-90 mo	100.0
TIGR02817	336	adh_fam_1 zinc-binding alcohol dehydrogenase famil	100.0
PRK10754	327	quinone oxidoreductase, NADPH-dependent; Provision	100.0
KOG1198	347	consensus Zinc-binding oxidoreductase [Energy prod	100.0
PTZ00354	334	alcohol dehydrogenase; Provisional	100.0
cd05280	325	MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone	100.0
cd08276	336	MDR7 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08290	341	ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi	100.0
cd08244	324	MDR_enoyl_red Possible enoyl reductase. Member ide	100.0
cd08270	305	MDR4 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08249	339	enoyl_reductase_like enoyl_reductase_like. Member	100.0
TIGR02823	323	oxido_YhdH putative quinone oxidoreductase, YhdH/Y	100.0
cd08243	320	quinone_oxidoreductase_like_1 Quinone oxidoreducta	100.0
cd08258	306	Zn_ADH4 Alcohol dehydrogenases of the MDR family.	100.0
cd08250	329	Mgc45594_like Mgc45594 gene product and other MDR	100.0
cd08248	350	RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu	100.0
cd05282	323	ETR_like 2-enoyl thioester reductase-like. 2-enoyl	100.0
cd08289	326	MDR_yhfp_like Yhfp putative quinone oxidoreductase	100.0
cd08252	336	AL_MDR Arginate lyase and other MDR family members	100.0
cd08269	312	Zn_ADH9 Alcohol dehydrogenases of the MDR family.	100.0
cd08288	324	MDR_yhdh Yhdh putative quinone oxidoreductases. Yh	100.0
cd08273	331	MDR8 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08253	325	zeta_crystallin Zeta-crystallin with NADP-dependen	100.0
cd08247	352	AST1_like AST1 is a cytoplasmic protein associated	100.0
cd05276	323	p53_inducible_oxidoreductase PIG3 p53-inducible qu	100.0
cd08271	325	MDR5 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05286	320	QOR2 Quinone oxidoreductase (QOR). Quinone oxidore	100.0
cd08251	303	polyketide_synthase polyketide synthase. Polyketid	100.0
cd08267	319	MDR1 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd08272	326	MDR6 Medium chain dehydrogenases/reductase (MDR)/z	100.0
cd05288	329	PGDH Prostaglandin dehydrogenases. Prostaglandins	100.0
cd05289	309	MDR_like_2 alcohol dehydrogenase and quinone reduc	100.0
cd05188	271	MDR Medium chain reductase/dehydrogenase (MDR)/zin	100.0
TIGR02824	325	quinone_pig3 putative NAD(P)H quinone oxidoreducta	99.98
cd08268	328	MDR2 Medium chain dehydrogenases/reductase (MDR)/z	99.98
cd05195	293	enoyl_red enoyl reductase of polyketide synthase.	99.97
cd08275	337	MDR3 Medium chain dehydrogenases/reductase (MDR)/z	99.97
cd08241	323	QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t	99.97
smart00829	288	PKS_ER Enoylreductase. Enoylreductase in Polyketid	99.97
KOG1196	343	consensus Predicted NAD-dependent oxidoreductase [	99.95
cd08255	277	2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_	99.94
KOG1202	2376	consensus Animal-type fatty acid synthase and rela	99.93
PF08240	109	ADH_N: Alcohol dehydrogenase GroES-like domain; In	99.89
PF00107	130	ADH_zinc_N: Zinc-binding dehydrogenase; InterPro:	99.5
PF13602	127	ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ	99.39
cd00401	413	AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado	99.3
PRK09424	509	pntA NAD(P) transhydrogenase subunit alpha; Provis	99.11
PRK05476	425	S-adenosyl-L-homocysteine hydrolase; Provisional	98.59
TIGR00561	511	pntA NAD(P) transhydrogenase, alpha subunit. In so	98.55
PRK11873	272	arsM arsenite S-adenosylmethyltransferase; Reviewe	98.54
PRK08306	296	dipicolinate synthase subunit A; Reviewed	98.53
PLN02494	477	adenosylhomocysteinase	98.47
TIGR00936	406	ahcY adenosylhomocysteinase. This enzyme hydrolyze	98.44
TIGR00518	370	alaDH alanine dehydrogenase. The family of known L	98.35
TIGR01035	417	hemA glutamyl-tRNA reductase. This enzyme, togethe	98.29
COG4221	246	Short-chain alcohol dehydrogenase of unknown speci	98.27
cd05213	311	NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain	98.2
PTZ00075	476	Adenosylhomocysteinase; Provisional	98.15
TIGR02853	287	spore_dpaA dipicolinic acid synthetase, A subunit.	98.12
PRK00517	250	prmA ribosomal protein L11 methyltransferase; Revi	98.06
PF01488	135	Shikimate_DH: Shikimate / quinate 5-dehydrogenase;	97.96
PRK08324	681	short chain dehydrogenase; Validated	97.91
PRK12771	564	putative glutamate synthase (NADPH) small subunit;	97.73
COG2518	209	Pcm Protein-L-isoaspartate carboxylmethyltransfera	97.64
PF02826	178	2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy	97.6
PLN03209	576	translocon at the inner envelope of chloroplast su	97.59
PRK12742	237	oxidoreductase; Provisional	97.58
PRK00045	423	hemA glutamyl-tRNA reductase; Reviewed	97.56
COG1748	389	LYS9 Saccharopine dehydrogenase and related protei	97.54
PRK00377	198	cbiT cobalt-precorrin-6Y C(15)-methyltransferase;	97.54
PF12847	112	Methyltransf_18: Methyltransferase domain; PDB: 3G	97.54
COG0686	371	Ald Alanine dehydrogenase [Amino acid transport an	97.5
COG2242	187	CobL Precorrin-6B methylase 2 [Coenzyme metabolism	97.48
PF00670	162	AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase	97.41
PF11017	314	DUF2855: Protein of unknown function (DUF2855); In	97.4
COG3967	245	DltE Short-chain dehydrogenase involved in D-alani	97.4
TIGR00406	288	prmA ribosomal protein L11 methyltransferase. Ribo	97.4
PRK05993	277	short chain dehydrogenase; Provisional	97.37
PRK05786	238	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.36
PF13460	183	NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X	97.35
COG0300	265	DltE Short-chain dehydrogenases of various substra	97.34
KOG1205	282	consensus Predicted dehydrogenase [Secondary metab	97.34
PRK08265	261	short chain dehydrogenase; Provisional	97.33
PRK06182	273	short chain dehydrogenase; Validated	97.32
PRK14175	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	97.3
PRK05693	274	short chain dehydrogenase; Provisional	97.28
cd01080	168	NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of	97.28
cd01078	194	NAD_bind_H4MPT_DH NADP binding domain of methylene	97.21
KOG1209	289	consensus 1-Acyl dihydroxyacetone phosphate reduct	97.2
PRK11705	383	cyclopropane fatty acyl phospholipid synthase; Pro	97.18
PRK08339	263	short chain dehydrogenase; Provisional	97.17
PRK07825	273	short chain dehydrogenase; Provisional	97.15
PF01135	209	PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl	97.14
PRK07109	334	short chain dehydrogenase; Provisional	97.11
PRK13940	414	glutamyl-tRNA reductase; Provisional	97.1
PRK07576	264	short chain dehydrogenase; Provisional	97.06
PRK06484	520	short chain dehydrogenase; Validated	97.06
PRK06484	520	short chain dehydrogenase; Validated	97.05
PRK13943	322	protein-L-isoaspartate O-methyltransferase; Provis	97.04
PRK05872	296	short chain dehydrogenase; Provisional	97.04
TIGR02469	124	CbiT precorrin-6Y C5,15-methyltransferase (decarbo	97.04
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	97.03
TIGR01809	282	Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO	97.02
PRK06505	271	enoyl-(acyl carrier protein) reductase; Provisiona	97.02
cd01065	155	NAD_bind_Shikimate_DH NAD(P) binding domain of Shi	97.02
PRK13942	212	protein-L-isoaspartate O-methyltransferase; Provis	97.01
PRK13944	205	protein-L-isoaspartate O-methyltransferase; Provis	97.0
PRK12548	289	shikimate 5-dehydrogenase; Provisional	97.0
COG0373	414	HemA Glutamyl-tRNA reductase [Coenzyme metabolism]	97.0
PRK07231	251	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.97
PRK03369	488	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	96.97
PRK08415	274	enoyl-(acyl carrier protein) reductase; Provisiona	96.96
PF03435	386	Saccharop_dh: Saccharopine dehydrogenase ; InterPr	96.95
PRK12939	250	short chain dehydrogenase; Provisional	96.95
PRK07523	255	gluconate 5-dehydrogenase; Provisional	96.94
PRK07060	245	short chain dehydrogenase; Provisional	96.94
PRK06180	277	short chain dehydrogenase; Provisional	96.94
PRK14192	283	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.93
PRK06139	330	short chain dehydrogenase; Provisional	96.93
PRK08618	325	ornithine cyclodeaminase; Validated	96.92
PF02353	273	CMAS: Mycolic acid cyclopropane synthetase; InterP	96.9
PRK00258	278	aroE shikimate 5-dehydrogenase; Reviewed	96.89
COG2227	243	UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-	96.88
PRK12549	284	shikimate 5-dehydrogenase; Reviewed	96.86
PLN00203	519	glutamyl-tRNA reductase	96.86
PRK07326	237	short chain dehydrogenase; Provisional	96.85
PRK06057	255	short chain dehydrogenase; Provisional	96.85
COG0169	283	AroE Shikimate 5-dehydrogenase [Amino acid transpo	96.84
PRK06200	263	2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog	96.81
PRK12367	245	short chain dehydrogenase; Provisional	96.8
PRK09242	257	tropinone reductase; Provisional	96.8
PRK06603	260	enoyl-(acyl carrier protein) reductase; Provisiona	96.79
PRK14027	283	quinate/shikimate dehydrogenase; Provisional	96.78
CHL00194	317	ycf39 Ycf39; Provisional	96.77
PRK07832	272	short chain dehydrogenase; Provisional	96.76
PRK08267	260	short chain dehydrogenase; Provisional	96.74
COG2230	283	Cfa Cyclopropane fatty acid synthase and related m	96.74
PRK12429	258	3-hydroxybutyrate dehydrogenase; Provisional	96.73
PRK09186	256	flagellin modification protein A; Provisional	96.72
TIGR00080	215	pimt protein-L-isoaspartate(D-aspartate) O-methylt	96.7
PRK10538	248	malonic semialdehyde reductase; Provisional	96.7
PRK07806	248	short chain dehydrogenase; Provisional	96.69
PRK12829	264	short chain dehydrogenase; Provisional	96.69
PRK12749	288	quinate/shikimate dehydrogenase; Reviewed	96.68
PRK00107	187	gidB 16S rRNA methyltransferase GidB; Reviewed	96.68
PRK09072	263	short chain dehydrogenase; Provisional	96.68
TIGR03325	262	BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro	96.66
PRK06500	249	short chain dehydrogenase; Provisional	96.66
PRK14189	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.66
PRK08159	272	enoyl-(acyl carrier protein) reductase; Provisiona	96.66
PRK08085	254	gluconate 5-dehydrogenase; Provisional	96.65
PRK04457	262	spermidine synthase; Provisional	96.63
PRK07424	406	bifunctional sterol desaturase/short chain dehydro	96.62
PRK13394	262	3-hydroxybutyrate dehydrogenase; Provisional	96.61
PRK08263	275	short chain dehydrogenase; Provisional	96.61
PRK05866	293	short chain dehydrogenase; Provisional	96.58
PRK10792	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.57
PF01262	168	AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal	96.57
PRK07062	265	short chain dehydrogenase; Provisional	96.56
PRK12550	272	shikimate 5-dehydrogenase; Reviewed	96.56
PRK08594	257	enoyl-(acyl carrier protein) reductase; Provisiona	96.55
PRK06079	252	enoyl-(acyl carrier protein) reductase; Provisiona	96.54
PRK07533	258	enoyl-(acyl carrier protein) reductase; Provisiona	96.54
COG1052	324	LdhA Lactate dehydrogenase and related dehydrogena	96.51
COG2226	238	UbiE Methylase involved in ubiquinone/menaquinone	96.5
PRK07063	260	short chain dehydrogenase; Provisional	96.5
PRK14191	285	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.49
PRK06196	315	oxidoreductase; Provisional	96.49
PRK07574	385	formate dehydrogenase; Provisional	96.48
PRK05854	313	short chain dehydrogenase; Provisional	96.48
PRK07831	262	short chain dehydrogenase; Provisional	96.46
PRK14194	301	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.46
PRK06128	300	oxidoreductase; Provisional	96.45
cd05212	140	NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding dom	96.44
PF02882	160	THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cycl	96.43
PRK07814	263	short chain dehydrogenase; Provisional	96.43
PRK08217	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	96.42
PRK05867	253	short chain dehydrogenase; Provisional	96.41
PRK05876	275	short chain dehydrogenase; Provisional	96.41
PF06325	295	PrmA: Ribosomal protein L11 methyltransferase (Prm	96.41
TIGR00507	270	aroE shikimate 5-dehydrogenase. This model finds p	96.4
PRK09291	257	short chain dehydrogenase; Provisional	96.4
COG0569	225	TrkA K+ transport systems, NAD-binding component [	96.39
PRK06949	258	short chain dehydrogenase; Provisional	96.38
PLN03139	386	formate dehydrogenase; Provisional	96.37
PRK13243	333	glyoxylate reductase; Reviewed	96.36
PRK06101	240	short chain dehydrogenase; Provisional	96.35
PRK05717	255	oxidoreductase; Validated	96.35
PRK07984	262	enoyl-(acyl carrier protein) reductase; Provisiona	96.34
PF10727	127	Rossmann-like: Rossmann-like domain; InterPro: IPR	96.34
PLN03075	296	nicotianamine synthase; Provisional	96.33
PF03807	96	F420_oxidored: NADP oxidoreductase coenzyme F420-d	96.32
PRK06194	287	hypothetical protein; Provisional	96.32
TIGR03840	213	TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d	96.31
PRK06940	275	short chain dehydrogenase; Provisional	96.31
PRK07985	294	oxidoreductase; Provisional	96.31
COG2264	300	PrmA Ribosomal protein L11 methylase [Translation,	96.3
PRK06398	258	aldose dehydrogenase; Validated	96.3
PRK07889	256	enoyl-(acyl carrier protein) reductase; Provisiona	96.28
cd01075	200	NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l	96.28
PRK12828	239	short chain dehydrogenase; Provisional	96.27
PRK07024	257	short chain dehydrogenase; Provisional	96.26
PF02254	116	TrkA_N: TrkA-N domain; InterPro: IPR003148 The reg	96.26
PRK14188	296	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.26
PRK15469	312	ghrA bifunctional glyoxylate/hydroxypyruvate reduc	96.25
PRK07370	258	enoyl-(acyl carrier protein) reductase; Validated	96.25
PLN02928	347	oxidoreductase family protein	96.25
PRK06718	202	precorrin-2 dehydrogenase; Reviewed	96.25
PRK07890	258	short chain dehydrogenase; Provisional	96.25
cd05311	226	NAD_bind_2_malic_enz NAD(P) binding domain of mali	96.25
PRK07502	307	cyclohexadienyl dehydrogenase; Validated	96.24
PRK07677	252	short chain dehydrogenase; Provisional	96.23
PF00106	167	adh_short: short chain dehydrogenase alcohol dehyd	96.23
KOG1201	300	consensus Hydroxysteroid 17-beta dehydrogenase 11	96.22
PRK07453	322	protochlorophyllide oxidoreductase; Validated	96.22
PRK07478	254	short chain dehydrogenase; Provisional	96.22
PRK08317	241	hypothetical protein; Provisional	96.21
PRK07402	196	precorrin-6B methylase; Provisional	96.2
TIGR01470	205	cysG_Nterm siroheme synthase, N-terminal domain. T	96.18
PLN02253	280	xanthoxin dehydrogenase	96.17
KOG1210	331	consensus Predicted 3-ketosphinganine reductase [S	96.17
PRK08177	225	short chain dehydrogenase; Provisional	96.16
PRK03659	601	glutathione-regulated potassium-efflux system prot	96.16
PLN00141	251	Tic62-NAD(P)-related group II protein; Provisional	96.15
PRK05884	223	short chain dehydrogenase; Provisional	96.15
PRK08589	272	short chain dehydrogenase; Validated	96.15
PF13241	103	NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_	96.14
PTZ00098	263	phosphoethanolamine N-methyltransferase; Provision	96.13
TIGR02992	326	ectoine_eutC ectoine utilization protein EutC. Mem	96.11
PRK07340	304	ornithine cyclodeaminase; Validated	96.09
PRK14178	279	bifunctional 5,10-methylene-tetrahydrofolate dehyd	96.09
TIGR02356	202	adenyl_thiF thiazole biosynthesis adenylyltransfer	96.09
PRK06841	255	short chain dehydrogenase; Provisional	96.09
PRK12747	252	short chain dehydrogenase; Provisional	96.08
PRK06125	259	short chain dehydrogenase; Provisional	96.07
PRK01581	374	speE spermidine synthase; Validated	96.06
PRK08862	227	short chain dehydrogenase; Provisional	96.05
COG2910	211	Putative NADH-flavin reductase [General function p	96.05
PRK07069	251	short chain dehydrogenase; Validated	96.04
PRK08017	256	oxidoreductase; Provisional	96.03
TIGR00438	188	rrmJ cell division protein FtsJ.	96.03
PRK08340	259	glucose-1-dehydrogenase; Provisional	96.02
PRK10669	558	putative cation:proton antiport protein; Provision	95.99
PRK06483	236	dihydromonapterin reductase; Provisional	95.98
PRK14176	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.98
PLN02233	261	ubiquinone biosynthesis methyltransferase	95.97
PRK07067	257	sorbitol dehydrogenase; Provisional	95.97
TIGR01318	467	gltD_gamma_fam glutamate synthase small subunit fa	95.96
PRK06197	306	short chain dehydrogenase; Provisional	95.96
PRK06719	157	precorrin-2 dehydrogenase; Validated	95.96
PRK08643	256	acetoin reductase; Validated	95.94
PRK06482	276	short chain dehydrogenase; Provisional	95.94
PRK08213	259	gluconate 5-dehydrogenase; Provisional	95.94
PRK07035	252	short chain dehydrogenase; Provisional	95.93
PRK14967	223	putative methyltransferase; Provisional	95.93
PRK13255	218	thiopurine S-methyltransferase; Reviewed	95.92
PRK06138	252	short chain dehydrogenase; Provisional	95.92
PRK12937	245	short chain dehydrogenase; Provisional	95.91
PRK00312	212	pcm protein-L-isoaspartate O-methyltransferase; Re	95.91
PRK07774	250	short chain dehydrogenase; Provisional	95.9
PRK06701	290	short chain dehydrogenase; Provisional	95.9
PRK12481	251	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.9
PRK14172	278	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.89
PRK12475	338	thiamine/molybdopterin biosynthesis MoeB-like prot	95.89
PLN02366	308	spermidine synthase	95.88
PRK03562	621	glutathione-regulated potassium-efflux system prot	95.88
PRK06172	253	short chain dehydrogenase; Provisional	95.87
PRK00811	283	spermidine synthase; Provisional	95.85
KOG0069	336	consensus Glyoxylate/hydroxypyruvate reductase (D-	95.84
PRK14177	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.83
PRK07074	257	short chain dehydrogenase; Provisional	95.83
PRK12938	246	acetyacetyl-CoA reductase; Provisional	95.82
PRK11036	255	putative S-adenosyl-L-methionine-dependent methylt	95.82
PRK12809	639	putative oxidoreductase Fe-S binding subunit; Revi	95.79
PRK08251	248	short chain dehydrogenase; Provisional	95.77
PRK14179	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.77
PRK06179	270	short chain dehydrogenase; Provisional	95.77
PRK06720	169	hypothetical protein; Provisional	95.77
PRK12936	245	3-ketoacyl-(acyl-carrier-protein) reductase NodG;	95.76
PRK07666	239	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.75
PRK13656	398	trans-2-enoyl-CoA reductase; Provisional	95.75
TIGR00417	270	speE spermidine synthase. the SpeE subunit of sper	95.75
PRK04148	134	hypothetical protein; Provisional	95.73
PRK06181	263	short chain dehydrogenase; Provisional	95.73
COG0027	394	PurT Formate-dependent phosphoribosylglycinamide f	95.72
KOG0725	270	consensus Reductases with broad range of substrate	95.71
PRK14190	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.69
PRK14180	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.68
PRK12746	254	short chain dehydrogenase; Provisional	95.68
PRK05875	276	short chain dehydrogenase; Provisional	95.67
PLN02244	340	tocopherol O-methyltransferase	95.67
PRK14982	340	acyl-ACP reductase; Provisional	95.67
TIGR01289	314	LPOR light-dependent protochlorophyllide reductase	95.64
PLN02780	320	ketoreductase/ oxidoreductase	95.64
PRK15409	323	bifunctional glyoxylate/hydroxypyruvate reductase	95.63
PRK06463	255	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.62
PRK08261	450	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.6
PRK12480	330	D-lactate dehydrogenase; Provisional	95.58
PRK07454	241	short chain dehydrogenase; Provisional	95.58
PRK14169	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.57
TIGR03589	324	PseB UDP-N-acetylglucosamine 4,6-dehydratase. This	95.57
PRK13581	526	D-3-phosphoglycerate dehydrogenase; Provisional	95.57
PF05368	233	NmrA: NmrA-like family; InterPro: IPR008030 NmrA i	95.57
PRK11207	197	tellurite resistance protein TehB; Provisional	95.57
PRK08644	212	thiamine biosynthesis protein ThiF; Provisional	95.57
PRK06124	256	gluconate 5-dehydrogenase; Provisional	95.56
PRK06198	260	short chain dehydrogenase; Provisional	95.55
PRK08277	278	D-mannonate oxidoreductase; Provisional	95.54
PRK07904	253	short chain dehydrogenase; Provisional	95.54
cd01079	197	NAD_bind_m-THF_DH NAD binding domain of methylene-	95.52
PLN02490	340	MPBQ/MSBQ methyltransferase	95.49
PRK07097	265	gluconate 5-dehydrogenase; Provisional	95.49
PRK05557	248	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.49
COG1179	263	Dinucleotide-utilizing enzymes involved in molybdo	95.48
PRK14173	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.48
PRK08642	253	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.47
PRK08410	311	2-hydroxyacid dehydrogenase; Provisional	95.46
PRK01683	258	trans-aconitate 2-methyltransferase; Provisional	95.46
PRK06935	258	2-deoxy-D-gluconate 3-dehydrogenase; Provisional	95.45
PRK06914	280	short chain dehydrogenase; Provisional	95.45
PRK08220	252	2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated	95.45
PRK14186	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.45
TIGR01832	248	kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod	95.43
PF02558	151	ApbA: Ketopantoate reductase PanE/ApbA; InterPro:	95.43
PRK11088	272	rrmA 23S rRNA methyltransferase A; Provisional	95.43
COG0111	324	SerA Phosphoglycerate dehydrogenase and related de	95.42
PRK12823	260	benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat	95.42
PLN02396	322	hexaprenyldihydroxybenzoate methyltransferase	95.41
PRK14618	328	NAD(P)H-dependent glycerol-3-phosphate dehydrogena	95.41
PRK12826	251	3-ketoacyl-(acyl-carrier-protein) reductase; Revie	95.39
PRK08703	239	short chain dehydrogenase; Provisional	95.39
PRK15181	348	Vi polysaccharide biosynthesis protein TviC; Provi	95.39
TIGR00477	195	tehB tellurite resistance protein TehB. Part of a	95.36
PRK07791	286	short chain dehydrogenase; Provisional	95.34
PLN02989	325	cinnamyl-alcohol dehydrogenase family protein	95.33
PRK04266	226	fibrillarin; Provisional	95.33
PRK14166	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.31
cd01487	174	E1_ThiF_like E1_ThiF_like. Member of superfamily o	95.3
TIGR01963	255	PHB_DH 3-hydroxybutyrate dehydrogenase. This model	95.29
PF01209	233	Ubie_methyltran: ubiE/COQ5 methyltransferase famil	95.29
PRK08762	376	molybdopterin biosynthesis protein MoeB; Validated	95.27
PRK06997	260	enoyl-(acyl carrier protein) reductase; Provisiona	95.26
PRK05653	246	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.26
PRK08264	238	short chain dehydrogenase; Validated	95.26
PRK06077	252	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.26
PLN02516	299	methylenetetrahydrofolate dehydrogenase (NADP+)	95.25
PF01408	120	GFO_IDH_MocA: Oxidoreductase family, NAD-binding R	95.24
PRK08291	330	ectoine utilization protein EutC; Validated	95.24
PRK06113	255	7-alpha-hydroxysteroid dehydrogenase; Validated	95.24
PRK07775	274	short chain dehydrogenase; Provisional	95.24
PLN02986	322	cinnamyl-alcohol dehydrogenase family protein	95.24
PRK14170	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.23
PRK07688	339	thiamine/molybdopterin biosynthesis ThiF/MoeB-like	95.23
PRK08287	187	cobalt-precorrin-6Y C(15)-methyltransferase; Valid	95.22
PRK08690	261	enoyl-(acyl carrier protein) reductase; Provisiona	95.21
PRK13403	335	ketol-acid reductoisomerase; Provisional	95.2
PRK14183	281	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.2
PF03446	163	NAD_binding_2: NAD binding domain of 6-phosphogluc	95.19
PRK14184	286	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.19
PRK06522	304	2-dehydropantoate 2-reductase; Reviewed	95.19
PRK12384	259	sorbitol-6-phosphate dehydrogenase; Provisional	95.18
PRK14187	294	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.17
PRK08416	260	7-alpha-hydroxysteroid dehydrogenase; Provisional	95.17
PRK08628	258	short chain dehydrogenase; Provisional	95.17
PRK10258	251	biotin biosynthesis protein BioC; Provisional	95.16
PF00899	135	ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-a	95.16
TIGR02752	231	MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone me	95.16
PRK08303	305	short chain dehydrogenase; Provisional	95.16
TIGR02354	200	thiF_fam2 thiamine biosynthesis protein ThiF, fami	95.14
PRK06953	222	short chain dehydrogenase; Provisional	95.14
PRK06932	314	glycerate dehydrogenase; Provisional	95.14
PLN02819	1042	lysine-ketoglutarate reductase/saccharopine dehydr	95.13
PRK09135	249	pteridine reductase; Provisional	95.13
PLN02896	353	cinnamyl-alcohol dehydrogenase	95.12
PRK08328	231	hypothetical protein; Provisional	95.12
PRK14171	288	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.1
PRK05565	247	fabG 3-ketoacyl-(acyl-carrier-protein) reductase;	95.08
cd00755	231	YgdL_like Family of activating enzymes (E1) of ubi	95.08
PRK14185	293	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.08
TIGR00446	264	nop2p NOL1/NOP2/sun family putative RNA methylase.	95.07
TIGR02622	349	CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member	95.07
TIGR02355	240	moeB molybdopterin synthase sulfurylase MoeB. This	95.06
PRK12744	257	short chain dehydrogenase; Provisional	95.05
PRK05650	270	short chain dehydrogenase; Provisional	95.05
PRK06141	314	ornithine cyclodeaminase; Validated	95.04
PRK12769	654	putative oxidoreductase Fe-S binding subunit; Revi	95.04
PRK14182	282	bifunctional 5,10-methylene-tetrahydrofolate dehyd	95.03
COG2519	256	GCD14 tRNA(1-methyladenosine) methyltransferase an	95.02
PF02719	293	Polysacc_synt_2: Polysaccharide biosynthesis prote	95.02
PLN02730	303	enoyl-[acyl-carrier-protein] reductase	94.97
COG3288	356	PntA NAD/NADP transhydrogenase alpha subunit [Ener	94.97
PRK07578	199	short chain dehydrogenase; Provisional	94.97
KOG1208	314	consensus Dehydrogenases with different specificit	94.96
PRK06114	254	short chain dehydrogenase; Provisional	94.94
COG0421	282	SpeE Spermidine synthase [Amino acid transport and	94.92
PRK07417	279	arogenate dehydrogenase; Reviewed	94.91
PRK14167	297	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.91
PRK09310	477	aroDE bifunctional 3-dehydroquinate dehydratase/sh	94.9
PLN02897	345	tetrahydrofolate dehydrogenase/cyclohydrolase, put	94.9
PRK08226	263	short chain dehydrogenase; Provisional	94.88
PRK08945	247	putative oxoacyl-(acyl carrier protein) reductase;	94.87
PLN02520	529	bifunctional 3-dehydroquinate dehydratase/shikimat	94.87
TIGR02964	246	xanthine_xdhC xanthine dehydrogenase accessory pro	94.86
PRK08063	250	enoyl-(acyl carrier protein) reductase; Provisiona	94.86
PRK14181	287	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.86
PRK01438	480	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.84
PRK14103	255	trans-aconitate 2-methyltransferase; Provisional	94.84
PRK08278	273	short chain dehydrogenase; Provisional	94.82
PRK14106	450	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.81
PRK14193	284	bifunctional 5,10-methylene-tetrahydrofolate dehyd	94.78
PRK00141	473	murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn	94.78
TIGR02415	254	23BDH acetoin reductases. One member of this famil	94.76
KOG1199	260	consensus Short-chain alcohol dehydrogenase/3-hydr	94.76
PRK05599	246	hypothetical protein; Provisional	94.76
PF13478	136	XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2	94.76
PRK03612	521	spermidine synthase; Provisional	94.75

>COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only]

Probab=100.00  E-value=1.1e-65  Score=455.07  Aligned_cols=324  Identities=41%  Similarity=0.665  Sum_probs=292.8

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      +++++++...+...++++++++.|+|+++||+|++.|+|+|++|++..+|.++...+|.++|||++|+|+++|+.|++|+
T Consensus         1 ~~~mkA~~~~~~~~pl~i~e~~~p~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG~V~~vG~~V~~~k   80 (339)
T COG1064           1 MMTMKAAVLKKFGQPLEIEEVPVPEPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVGTVVEVGEGVTGLK   80 (339)
T ss_pred             CcceEEEEEccCCCCceEEeccCCCCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEEEEEEecCCCccCC
Confidence            35566777766666689999999999999999999999999999999999999888999999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||||.+.+.+.+|++|.||++|+++.|++....       |...+|+|+||+++++.+++++|+++++.+||++.|++.
T Consensus        81 ~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~-------gy~~~GGyaeyv~v~~~~~~~iP~~~d~~~aApllCaGi  153 (339)
T COG1064          81 VGDRVGVGWLVISCGECEYCRSGNENLCPNQKIT-------GYTTDGGYAEYVVVPARYVVKIPEGLDLAEAAPLLCAGI  153 (339)
T ss_pred             CCCEEEecCccCCCCCCccccCcccccCCCcccc-------ceeecCcceeEEEEchHHeEECCCCCChhhhhhhhcCee
Confidence            9999999788889999999999999999985332       335789999999999999999999999999999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d  246 (344)
                      |.|++++.... +||++|+|.|+|++|.+++|+|+++|++|+++++++++++.+ +++|++++++..+++..+...+.+|
T Consensus       154 T~y~alk~~~~-~pG~~V~I~G~GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a-~~lGAd~~i~~~~~~~~~~~~~~~d  231 (339)
T COG1064         154 TTYRALKKANV-KPGKWVAVVGAGGLGHMAVQYAKAMGAEVIAITRSEEKLELA-KKLGADHVINSSDSDALEAVKEIAD  231 (339)
T ss_pred             eEeeehhhcCC-CCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEeCChHHHHHH-HHhCCcEEEEcCCchhhHHhHhhCc
Confidence            99999988555 999999999999999999999999999999999999999999 7999999999877766666655699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCC--c-cccCCceee----------eechHhHHHHHHHHHhCCCccce-E
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--K-VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQI-E  312 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~-~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~-~  312 (344)
                      +++|+++ +.+++.+++.|+++|+++++|...  . ..++.+.+.          .+++.++++++++.++|+++|.+ +
T Consensus       232 ~ii~tv~-~~~~~~~l~~l~~~G~~v~vG~~~~~~~~~~~~~~li~~~~~i~GS~~g~~~d~~e~l~f~~~g~Ikp~i~e  310 (339)
T COG1064         232 AIIDTVG-PATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAFLLILKEISIVGSLVGTRADLEEALDFAAEGKIKPEILE  310 (339)
T ss_pred             EEEECCC-hhhHHHHHHHHhcCCEEEEECCCCCcccCCCCHHHhhhcCeEEEEEecCCHHHHHHHHHHHHhCCceeeEEe
Confidence            9999999 788999999999999999999873  2 224444333          56678999999999999999999 7


Q ss_pred             EEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          313 TIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       313 ~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      .++++|+++|++.|.+++..||+||++.
T Consensus       311 ~~~l~~in~A~~~m~~g~v~gR~Vi~~~  338 (339)
T COG1064         311 TIPLDEINEAYERMEKGKVRGRAVIDMS  338 (339)
T ss_pred             eECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence            9999999999999999999999999864

>KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=2.2e-62  Score=419.90  Aligned_cols=342  Identities=51%  Similarity=0.852  Sum_probs=314.2

Q ss_pred             CCccccccceeeeeecCCCC--CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEe
Q 019199            1 MTSETASKDCLGWAARDPSG--VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEV   78 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~   78 (344)
                      |++|..+.++..|..++..+  +++..++++|+|.++||+|+++|+|||++|++.+.|.++...+|.++|||.+|+|+++
T Consensus         1 ~~~~~~p~k~~g~~~~~~~G~l~p~~~~~~~~~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG~Vvkv   80 (360)
T KOG0023|consen    1 MSSMSIPEKQFGWAARDPSGVLSPEVFSFPVREPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAGVVVKV   80 (360)
T ss_pred             CCcccCchhhEEEEEECCCCCCCcceeEcCCCCCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeEEEEEE
Confidence            77889999999999998888  4555999999999999999999999999999999999999999999999999999999


Q ss_pred             cCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc
Q 019199           79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA  158 (344)
Q Consensus        79 G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a  158 (344)
                      |++|++|++||+|-+-+..-+|++|.||.++..++|++.-..+++.-.||..+.|+||+|+++++..+++||+++++++|
T Consensus        81 Gs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kIP~~~pl~~a  160 (360)
T KOG0023|consen   81 GSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKIPENLPLASA  160 (360)
T ss_pred             CCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEECCCCCChhhc
Confidence            99999999999999999888999999999999999999888888999999999999999999999999999999999999


Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCC-CHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS-DLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~-~~~~  237 (344)
                      |++.|++.|.|.+|...+. .||+++-|.|+|++|..++|+||++|.+|+++++++.+.+++.+.+|++..++.. ++++
T Consensus       161 APlLCaGITvYspLk~~g~-~pG~~vgI~GlGGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~~~~d~d~  239 (360)
T KOG0023|consen  161 APLLCAGITVYSPLKRSGL-GPGKWVGIVGLGGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVDSTEDPDI  239 (360)
T ss_pred             cchhhcceEEeehhHHcCC-CCCcEEEEecCcccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEEecCCHHH
Confidence            9999999999999998887 7999999999977999999999999999999999997777777899999888877 7888


Q ss_pred             HHHhcCCccEEEECCC--CchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHh
Q 019199          238 MKALGKSLDFIIDTAS--GDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAA  304 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g--~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~  304 (344)
                      ++++.+-.|..++++.  ....+..+++.++++|++|++|.+ ....++.+++.          .+++.+.++++++.++
T Consensus       240 ~~~~~~~~dg~~~~v~~~a~~~~~~~~~~lk~~Gt~V~vg~p~~~~~~~~~~lil~~~~I~GS~vG~~ket~E~Ldf~a~  319 (360)
T KOG0023|consen  240 MKAIMKTTDGGIDTVSNLAEHALEPLLGLLKVNGTLVLVGLPEKPLKLDTFPLILGRKSIKGSIVGSRKETQEALDFVAR  319 (360)
T ss_pred             HHHHHHhhcCcceeeeeccccchHHHHHHhhcCCEEEEEeCcCCcccccchhhhcccEEEEeeccccHHHHHHHHHHHHc
Confidence            8776554555555555  555699999999999999999998 56667777665          5678999999999999


Q ss_pred             CCCccceEEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          305 HKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       305 g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                      +.++++++..+++++++|+++|.+++..+|+||++..++
T Consensus       320 ~~ik~~IE~v~~~~v~~a~erm~kgdV~yRfVvD~s~~~  358 (360)
T KOG0023|consen  320 GLIKSPIELVKLSEVNEAYERMEKGDVRYRFVVDVSKSL  358 (360)
T ss_pred             CCCcCceEEEehhHHHHHHHHHHhcCeeEEEEEEccccc
Confidence            999999999999999999999999999999999998775

>PLN02586 probable cinnamyl alcohol dehydrogenase

Probab=100.00  E-value=9e-54  Score=396.31  Aligned_cols=337  Identities=53%  Similarity=0.945  Sum_probs=286.4

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      .+||+++|...+.++.++..+++.|+|+++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus         9 ~~~~~~~~~~~~~~~~l~~~~~~~p~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   88 (360)
T PLN02586          9 HPQKAFGWAARDPSGVLSPFHFSRRENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVGIVTKLGKNVKKF   88 (360)
T ss_pred             chhheeEEEecCCCCCceEEeecCCCCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeEEEEEECCCCCcc
Confidence            58999999998878889999999999999999999999999999999888765544678999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||+|++.+...+|++|.+|++|.++.|++..+.+.....+|...+|+|+||+.++++.++++|+++++++++++++.+
T Consensus        89 ~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~  168 (360)
T PLN02586         89 KEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRFPDNLPLDAGAPLLCAG  168 (360)
T ss_pred             CCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeCCCCCCHHHhhhhhcch
Confidence            99999987666568999999999999999986543322222233347999999999999999999999999999999999


Q ss_pred             hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~  245 (344)
                      .|+|+++.....+++|++|||.|+|++|++++|+||.+|++|++++.+++++..+.+++|++.+++..+.+.+.+..+++
T Consensus       169 ~ta~~al~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~~~Ga~~vi~~~~~~~~~~~~~~~  248 (360)
T PLN02586        169 ITVYSPMKYYGMTEPGKHLGVAGLGGLGHVAVKIGKAFGLKVTVISSSSNKEDEAINRLGADSFLVSTDPEKMKAAIGTM  248 (360)
T ss_pred             HHHHHHHHHhcccCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHHhCCCcEEEcCCCHHHHHhhcCCC
Confidence            99999987777668999999999999999999999999999998888877766565789999999877655555555679


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEE
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETI  314 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~  314 (344)
                      |++||++|...++..++++++++|+++.+|.. ....++...+.          ....++++++++++++|++++.+++|
T Consensus       249 D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~~~  328 (360)
T PLN02586        249 DYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKPLELPIFPLVLGRKLVGGSDIGGIKETQEMLDFCAKHNITADIELI  328 (360)
T ss_pred             CEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCCCccCHHHHHhCCeEEEEcCcCCHHHHHHHHHHHHhCCCCCcEEEE
Confidence            99999999876799999999999999999865 33333332211          12346899999999999999877899


Q ss_pred             eCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          315 PIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       315 ~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      +|+|+++||+.+.+++..||+|+.+...
T Consensus       329 ~l~~~~~A~~~~~~~~~~gkvvi~~~~~  356 (360)
T PLN02586        329 RMDEINTAMERLAKSDVRYRFVIDVANS  356 (360)
T ss_pred             eHHHHHHHHHHHHcCCCcEEEEEEcccc
Confidence            9999999999999998889999987543

>COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion]

Probab=100.00  E-value=3e-54  Score=374.07  Aligned_cols=327  Identities=27%  Similarity=0.414  Sum_probs=281.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      |++++.+.++...+|+++++++++|++|||+||+.++|+||+|...++|..+.. +|.++|||++|+|+++|+.|+++++
T Consensus         1 mk~~aAV~~~~~~Pl~i~ei~l~~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHEgAGiVe~VG~gVt~vkp   79 (366)
T COG1062           1 MKTRAAVAREAGKPLEIEEVDLDPPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHEGAGIVEAVGEGVTSVKP   79 (366)
T ss_pred             CCceEeeeecCCCCeEEEEEecCCCCCCeEEEEEEEeeccccchhhhcCCCCCC-CceecccccccEEEEecCCccccCC
Confidence            567788888888999999999999999999999999999999999999998865 9999999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCcc-ccccccccCCCCc-----------c--CCcceeEEEEecceEEEcCCCC
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGTI-----------T--KGGYSSYIVVHERYCYKIANDY  153 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~-~~~~~~~~~~~~~-----------~--~g~~~~~~~~~~~~~~~~P~~~  153 (344)
                      ||+|+. .+.+.|++|.+|.+|+++.|... ...+.+...+|..           .  -++|++|..+++.+++|++++.
T Consensus        80 GDhVI~-~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~~s~vki~~~~  158 (366)
T COG1062          80 GDHVIL-LFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHEISLVKIDPDA  158 (366)
T ss_pred             CCEEEE-cccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecccceEECCCCC
Confidence            999954 45569999999999999999754 1111122222211           1  2489999999999999999999


Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      +++.++.+.|..+|.+.+..+..++++|++|.|.|.|++|++++|-|+..|+ +|++++.+++|++++ ++||+++++|.
T Consensus       159 p~~~a~llGCgV~TG~Gav~nta~v~~G~tvaV~GlGgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~A-~~fGAT~~vn~  237 (366)
T COG1062         159 PLEKACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGLGGVGLAAIQGAKAAGAGRIIAVDINPEKLELA-KKFGATHFVNP  237 (366)
T ss_pred             CccceEEEeeeeccChHHhhhcccCCCCCeEEEEeccHhHHHHHHHHHHcCCceEEEEeCCHHHHHHH-HhcCCceeecc
Confidence            9999999999999999999999999999999999999999999999999999 999999999999999 79999999999


Q ss_pred             CCHH-H---HHHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee---------ee---ch
Q 019199          233 SDLE-Q---MKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN---------IG---GT  292 (344)
Q Consensus       233 ~~~~-~---~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~---------~~---~~  292 (344)
                      .+.. .   +.+++ +++|++||++|+...+++++++..++|+.+.+|..   ....++++.+.         ++   .+
T Consensus       238 ~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~~~i~~~~~~lv~gr~~~Gs~~G~~~p~  317 (366)
T COG1062         238 KEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAGQEISTRPFQLVTGRVWKGSAFGGARPR  317 (366)
T ss_pred             hhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCCceeecChHHeeccceEEEEeecCCccc
Confidence            8763 3   33445 49999999999999999999999999999999987   33334555544         11   23


Q ss_pred             HhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          293 KDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       293 ~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .++..+++|+.+|+|..  .+ +.++|||++|||++|.+++.. |-||.
T Consensus       318 ~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~  365 (366)
T COG1062         318 SDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR  365 (366)
T ss_pred             cchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence            68999999999999953  44 899999999999999998876 44443

>KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=1.3e-52  Score=360.71  Aligned_cols=319  Identities=26%  Similarity=0.424  Sum_probs=272.3

Q ss_pred             eeeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCC---CCCCCCcccccceEEEEecCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ++++++ +++++++++.++|++ .|+||+|++.++|||+||++.+.+....   .+.|+++|||.+|+|+++|+.|++++
T Consensus         6 ~A~vl~-g~~di~i~~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssGiV~evG~~Vk~Lk   84 (354)
T KOG0024|consen    6 LALVLR-GKGDIRIEQRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSGIVEEVGDEVKHLK   84 (354)
T ss_pred             ceeEEE-ccCceeEeeCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCccccccccccccccccchhhhcccccccc
Confidence            444443 578899999999997 9999999999999999999998765542   24799999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||||++-|.. +|+.|+.|++|+++.|+.-.+.-++      ..+|++++|...+++.++|+||+++++++| +..++.
T Consensus        85 VGDrVaiEpg~-~c~~cd~CK~GrYNlCp~m~f~atp------p~~G~la~y~~~~~dfc~KLPd~vs~eeGA-l~ePLs  156 (354)
T KOG0024|consen   85 VGDRVAIEPGL-PCRDCDFCKEGRYNLCPHMVFCATP------PVDGTLAEYYVHPADFCYKLPDNVSFEEGA-LIEPLS  156 (354)
T ss_pred             cCCeEEecCCC-ccccchhhhCcccccCCccccccCC------CcCCceEEEEEechHheeeCCCCCchhhcc-cccchh
Confidence            99999998876 7999999999999999987554443      457999999999999999999999999998 444688


Q ss_pred             HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCH---HHHHHh-
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQMKAL-  241 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~~~~~-  241 (344)
                      .+||+.++..- ++|++|||+|+|++|+.++..||++|+ +|++++..++|++.+ +++|++.+.+....   +.+.+. 
T Consensus       157 V~~HAcr~~~v-k~Gs~vLV~GAGPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~A-k~~Ga~~~~~~~~~~~~~~~~~~v  234 (354)
T KOG0024|consen  157 VGVHACRRAGV-KKGSKVLVLGAGPIGLLTGLVAKAMGASDVVITDLVANRLELA-KKFGATVTDPSSHKSSPQELAELV  234 (354)
T ss_pred             hhhhhhhhcCc-ccCCeEEEECCcHHHHHHHHHHHHcCCCcEEEeecCHHHHHHH-HHhCCeEEeeccccccHHHHHHHH
Confidence            89999987776 999999999999999999999999999 999999999999999 57999988776552   222222 


Q ss_pred             ----c-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eech-HhHHHHHHHHHhC
Q 019199          242 ----G-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGT-KDTQEMLEYCAAH  305 (344)
Q Consensus       242 ----~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~-~~~~~~~~~~~~g  305 (344)
                          + ..+|++|||+|...+++.++.+++.+|++++.|+. ...+|+.....         +.+. .+++.+++++.+|
T Consensus       235 ~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~~~~fpi~~v~~kE~~~~g~fry~~~~y~~ai~li~sG  314 (354)
T KOG0024|consen  235 EKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAEEIQFPIIDVALKEVDLRGSFRYCNGDYPTAIELVSSG  314 (354)
T ss_pred             HhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCCccccChhhhhhheeeeeeeeeeccccHHHHHHHHHcC
Confidence                2 45999999999999999999999999999999987 56666655544         2222 4899999999999


Q ss_pred             CCc--cce-EEEeCccHHHHHHHHHcCCcc-eEEEEEeC
Q 019199          306 KIY--PQI-ETIPIENVNEALERLIKRDVK-YRFVIDIQ  340 (344)
Q Consensus       306 ~~~--~~~-~~~~~~~~~~a~~~~~~~~~~-gkvvi~~~  340 (344)
                      +++  +.+ +.|+++++.+||+.+.+++.. -|+++..+
T Consensus       315 ki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~  353 (354)
T KOG0024|consen  315 KIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP  353 (354)
T ss_pred             CcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence            996  455 899999999999999998753 48888765

>PLN02178 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.1e-51  Score=383.72  Aligned_cols=335  Identities=52%  Similarity=0.921  Sum_probs=279.0

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      +.++.++...+.++.++..+++.|+|+++||+|||.++|+|++|++.+.|......+|.++|||++|+|+++|+++++|+
T Consensus         4 ~~~a~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG~Vv~vG~~v~~~~   83 (375)
T PLN02178          4 QNKAFGWAANDESGVLSPFHFSRRENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVGIATKVGKNVTKFK   83 (375)
T ss_pred             cceeEEEEEccCCCCceEEeecCCCCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeEEEEEECCCCCccC
Confidence            45677888877778888889999999999999999999999999999887654345689999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|++.+...+|++|.+|++|+++.|++..+.+......|....|+|+||+.++++.++++|+++++++++++++...
T Consensus        84 vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~lP~~ls~~~aa~l~~~~~  163 (375)
T PLN02178         84 EGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSIPDGLPSDSGAPLLCAGI  163 (375)
T ss_pred             CCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEECCCCCCHHHcchhhccch
Confidence            99999866655579999999999999999864322211111223369999999999999999999999999999999999


Q ss_pred             HhHHHHHhccC-CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199          167 TVYTPMMRHKM-NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       167 ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~  245 (344)
                      |+|+++..... .++|++|+|.|+|++|++++|+|+.+|++|++++.+++++..+.+++|++++++..+.+.+.+..+++
T Consensus       164 ta~~al~~~~~~~~~g~~VlV~G~G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~~lGa~~~i~~~~~~~v~~~~~~~  243 (375)
T PLN02178        164 TVYSPMKYYGMTKESGKRLGVNGLGGLGHIAVKIGKAFGLRVTVISRSSEKEREAIDRLGADSFLVTTDSQKMKEAVGTM  243 (375)
T ss_pred             HHHHHHHHhCCCCCCCCEEEEEcccHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHHhCCCcEEEcCcCHHHHHHhhCCC
Confidence            99999876653 36899999999999999999999999999999888766543444789999998876654444445679


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEE
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETI  314 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~  314 (344)
                      |++||++|.+..+..++++++++|+++.+|.. ....++...+.          ....++++++++++++|++++.+++|
T Consensus       244 D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i~~~  323 (375)
T PLN02178        244 DFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKPLDLPIFPLVLGRKMVGGSQIGGMKETQEMLEFCAKHKIVSDIELI  323 (375)
T ss_pred             cEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCCCccCHHHHHhCCeEEEEeCccCHHHHHHHHHHHHhCCCcccEEEE
Confidence            99999999886689999999999999999975 33333332221          22347899999999999999888889


Q ss_pred             eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          315 PIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       315 ~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +|+|+++||+.+.+++..||+|+.+.+
T Consensus       324 ~l~~~~~A~~~~~~~~~~gkvvi~~~~  350 (375)
T PLN02178        324 KMSDINSAMDRLAKSDVRYRFVIDVAN  350 (375)
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEEecc
Confidence            999999999999999988999999843

>PLN02514 cinnamyl-alcohol dehydrogenase

Probab=100.00  E-value=1.4e-50  Score=374.84  Aligned_cols=342  Identities=47%  Similarity=0.844  Sum_probs=286.7

Q ss_pred             CCccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecC
Q 019199            1 MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      |.+...-.++++++..++.+.+++++++.|+|+++||+||+.++++|++|++.+.|..+...+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~Vv~vG~   80 (357)
T PLN02514          1 MGSLEAEKKTTGWAARDPSGHLSPYTYTLRKTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVGEVVEVGS   80 (357)
T ss_pred             CCccCCCceEEEEEEecCCCCceEEeecCCCCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeEEEEEECC
Confidence            44444555688888887888899999999999999999999999999999998887654445688999999999999999


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP  160 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~  160 (344)
                      .+++|++||+|++.+....|++|.+|++|.++.|.+..+.+.+....|....|+|+||+.++...++++|+++++.++++
T Consensus        81 ~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  160 (357)
T PLN02514         81 DVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKIPEGMAPEQAAP  160 (357)
T ss_pred             CcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEECCCCCCHHHhhh
Confidence            99999999999876655579999999999999998763332211112333469999999999999999999999999999


Q ss_pred             cchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199          161 LLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA  240 (344)
Q Consensus       161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~  240 (344)
                      +++.+.|||+++......++|++|+|+|+|++|++++|+||.+|++|++++.+++++..+.+++|++.+++..+.+.+.+
T Consensus       161 l~~~~~ta~~al~~~~~~~~g~~vlV~G~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~~~~~~~~  240 (357)
T PLN02514        161 LLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSSDAAEMQE  240 (357)
T ss_pred             hhhhHHHHHHHHHHcccCCCCCeEEEEcccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCCChHHHHH
Confidence            99999999999987777689999999998999999999999999999999888888777767899988887665555555


Q ss_pred             hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCcc
Q 019199          241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~  309 (344)
                      ...++|++||++|...++..++++++++|+++.+|.. ...+++...+.          .....+++++++++++|++++
T Consensus       241 ~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~l~~  320 (357)
T PLN02514        241 AADSLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTPLQFVTPMLMLGRKVITGSFIGSMKETEEMLEFCKEKGLTS  320 (357)
T ss_pred             hcCCCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCcccHHHHhhCCcEEEEEecCCHHHHHHHHHHHHhCCCcC
Confidence            5568999999999776799999999999999999976 32233222211          223468999999999999988


Q ss_pred             ceEEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          310 QIETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       310 ~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      .+++|+++|+.+||+.+.+++..||+++.++.+
T Consensus       321 ~i~~~~l~~~~~A~~~~~~~~~~gk~v~~~~~~  353 (357)
T PLN02514        321 MIEVVKMDYVNTAFERLEKNDVRYRFVVDVAGS  353 (357)
T ss_pred             cEEEEcHHHHHHHHHHHHcCCCceeEEEEcccc
Confidence            788999999999999999999889999998753

>KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism]

Probab=100.00  E-value=5.7e-50  Score=341.88  Aligned_cols=330  Identities=25%  Similarity=0.384  Sum_probs=286.8

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      ...+.++.+..++..+|.++++++++|..+||+||+.++++|++|...++|..+...+|.++|||++|+|+.+|..|..+
T Consensus         4 kvI~CKAAV~w~a~~PL~IEei~V~pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaaGIVESvGegV~~v   83 (375)
T KOG0022|consen    4 KVITCKAAVAWEAGKPLVIEEIEVAPPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAAGIVESVGEGVTTV   83 (375)
T ss_pred             CceEEeEeeeccCCCCeeEEEEEeCCCCCceEEEEEEEEeeccccceeecCCCccccCceEecccceeEEEEecCCcccc
Confidence            45677888888889999999999999999999999999999999999999988778899999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCcccccc--ccccCCCCcc-------------CCcceeEEEEecceEEEcC
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF--NAIDADGTIT-------------KGGYSSYIVVHERYCYKIA  150 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~--~~~~~~~~~~-------------~g~~~~~~~~~~~~~~~~P  150 (344)
                      ++||+|+ ..+.+-|++|.+|.+++++.|.++....  ..+.+||...             ..+|+||-.+++..+.||+
T Consensus        84 k~GD~Vi-plf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv~~~~v~kId  162 (375)
T KOG0022|consen   84 KPGDHVI-PLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVVDDISVAKID  162 (375)
T ss_pred             CCCCEEe-eccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEeecceeEecC
Confidence            9999995 4455689999999999999998863332  2222232221             2489999999999999999


Q ss_pred             CCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEE
Q 019199          151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKF  229 (344)
Q Consensus       151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~  229 (344)
                      +..+++.++.+.|...|+|.+..+.+.+++|+++.|+|.|++|+++++-||+.|| +||.++-++++.+.+ ++||+++.
T Consensus       163 ~~aPl~kvcLLgCGvsTG~GAa~~~Akv~~GstvAVfGLG~VGLav~~Gaka~GAsrIIgvDiN~~Kf~~a-k~fGaTe~  241 (375)
T KOG0022|consen  163 PSAPLEKVCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGLGGVGLAVAMGAKAAGASRIIGVDINPDKFEKA-KEFGATEF  241 (375)
T ss_pred             CCCChhheeEeeccccccchhhhhhcccCCCCEEEEEecchHHHHHHHhHHhcCcccEEEEecCHHHHHHH-HhcCccee
Confidence            9999999999999999999999999999999999999999999999999999999 999999999999999 79999999


Q ss_pred             EeCCCH-----HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC---CccccCCceee-----------
Q 019199          230 VVSSDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP---SKVKFSPASLN-----------  288 (344)
Q Consensus       230 v~~~~~-----~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~---~~~~~~~~~~~-----------  288 (344)
                      +|+.+.     +.+.+++ +|+|+.|||+|+..++++++.+.+.+ |+-+.+|..   ....+.++.+.           
T Consensus       242 iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~~~i~~~p~~l~~GR~~~Gs~FG  321 (375)
T KOG0022|consen  242 INPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAGQEISTRPFQLVTGRTWKGSAFG  321 (375)
T ss_pred             cChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCCcccccchhhhccccEEEEEecc
Confidence            998753     3455555 78999999999999999999999998 999999987   34445555444           


Q ss_pred             -eechHhHHHHHHHHHhCCCc--cc-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          289 -IGGTKDTQEMLEYCAAHKIY--PQ-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       289 -~~~~~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                       +..+.++..+++.+-++++.  .. +|++||+++++||+.|.+++.. |-|+.
T Consensus       322 G~K~~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~  374 (375)
T KOG0022|consen  322 GFKSKSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW  374 (375)
T ss_pred             cccchhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence             44568899999999999885  34 4999999999999999999976 66664

>PRK09880 L-idonate 5-dehydrogenase; Provisional

Probab=100.00  E-value=2.2e-48  Score=358.63  Aligned_cols=322  Identities=20%  Similarity=0.284  Sum_probs=260.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhc-CCCC--CCCCCCCcccccceEEEEecCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR-NKHG--DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      .++++.+++ +++.+++++.+.| +.++||||||.++|+|++|++.+. |..+  ...+|.++|||++|+|+++  ++++
T Consensus         3 ~~~~~~~~~-~~~~~~~~~~~~p-~~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G~V~~v--~v~~   78 (343)
T PRK09880          3 VKTQSCVVA-GKKDVAVTEQEIE-WNNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIGKIVHS--DSSG   78 (343)
T ss_pred             ccceEEEEe-cCCceEEEecCCC-CCCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEEEEEEe--cCcc
Confidence            455666665 6677899999987 689999999999999999998775 3332  2357899999999999999  6789


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++||+|++.+. .+|++|.+|+.|.++.|++..+.  +.........|+|+||++++++.++++|+++++.+++ +..+
T Consensus        79 ~~vGdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~--g~~~~~~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa-~~~~  154 (343)
T PRK09880         79 LKEGQTVAINPS-KPCGHCKYCLSHNENQCTTMRFF--GSAMYFPHVDGGFTRYKVVDTAQCIPYPEKADEKVMA-FAEP  154 (343)
T ss_pred             CCCCCEEEECCC-CCCcCChhhcCCChhhCCCccee--ecccccCCCCCceeeeEEechHHeEECCCCCCHHHHH-hhcH
Confidence            999999988765 48999999999999999885431  1110001236999999999999999999999987655 5567


Q ss_pred             hhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH--Hh
Q 019199          165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--AL  241 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~  241 (344)
                      +.+||+++.+... .+|++|+|+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++.+.+..+  +.
T Consensus       155 ~~~a~~al~~~~~-~~g~~VlV~G~G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~~  232 (343)
T PRK09880        155 LAVAIHAAHQAGD-LQGKRVFVSGVGPIGCLIVAAVKTLGAAEIVCADVSPRSLSLA-REMGADKLVNPQNDDLDHYKAE  232 (343)
T ss_pred             HHHHHHHHHhcCC-CCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHH-HHcCCcEEecCCcccHHHHhcc
Confidence            7899999987766 689999999999999999999999999 689999999999888 689999999876643221  12


Q ss_pred             cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHhHHHHHHHHHhCCCcc--
Q 019199          242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKDTQEMLEYCAAHKIYP--  309 (344)
Q Consensus       242 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~--  309 (344)
                      .+++|++||++|++.++..++++++++|+++.+|.. ....++...+.         ....++++++++++.+|++++  
T Consensus       233 ~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~l~~~g~i~~~~  312 (343)
T PRK09880        233 KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGAPPEFPMMTLIVKEISLKGSFRFTEEFNTAVSWLANGVINPLP  312 (343)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHHhCCcEEEEEeeccccHHHHHHHHHcCCCCchh
Confidence            246999999999877799999999999999999975 32333322221         222467899999999999975  


Q ss_pred             ce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          310 QI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       310 ~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      .+ ++|+++|+++|++.+.+++..||+++.+
T Consensus       313 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  343 (343)
T PRK09880        313 LLSAEYPFTDLEEALIFAGDKTQAAKVQLVF  343 (343)
T ss_pred             heEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence            34 8999999999999999988789999863

>TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=3.1e-48  Score=355.14  Aligned_cols=304  Identities=29%  Similarity=0.464  Sum_probs=261.0

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      ..++++++|.|+|+++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+.+++|++||+|++.+...+
T Consensus        13 ~~l~~~~~p~P~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~   92 (329)
T TIGR02822        13 GPLRFVERPVPRPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVGEVAGRGADAGGFAVGDRVGIAWLRRT   92 (329)
T ss_pred             CCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEEEEEEECCCCcccCCCCEEEEcCccCc
Confidence            46889999999999999999999999999999999887654445789999999999999999999999999988776668


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ  179 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  179 (344)
                      |+.|.+|+.|..+.|++..+  .     |....|+|+||+.+++..++++|+++++.+++++++.+.|||+++.. ..++
T Consensus        93 c~~c~~c~~g~~~~c~~~~~--~-----g~~~~G~~aey~~v~~~~~~~lP~~~~~~~aa~l~~~~~ta~~~~~~-~~~~  164 (329)
T TIGR02822        93 CGVCRYCRRGAENLCPASRY--T-----GWDTDGGYAEYTTVPAAFAYRLPTGYDDVELAPLLCAGIIGYRALLR-ASLP  164 (329)
T ss_pred             CCCChHHhCcCcccCCCccc--C-----CcccCCcceeEEEeccccEEECCCCCCHHHhHHHhccchHHHHHHHh-cCCC
Confidence            99999999999999987533  1     22346899999999999999999999999999999999999999975 4569


Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++++++..+..     .+++|+++++.+...++.
T Consensus       165 ~g~~VlV~G~g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a-~~~Ga~~vi~~~~~~-----~~~~d~~i~~~~~~~~~~  238 (329)
T TIGR02822       165 PGGRLGLYGFGGSAHLTAQVALAQGATVHVMTRGAAARRLA-LALGAASAGGAYDTP-----PEPLDAAILFAPAGGLVP  238 (329)
T ss_pred             CCCEEEEEcCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHhCCceeccccccC-----cccceEEEECCCcHHHHH
Confidence            99999999999999999999999999999999999998888 799999988754321     246899999888777899


Q ss_pred             HHHHhcccCCEEEEEcCC-Cc-cccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHHHHH
Q 019199          260 AYMSLLKVAGVYVLVGFP-SK-VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLI  327 (344)
Q Consensus       260 ~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~~~  327 (344)
                      .++++++++|+++.+|.. .. ..++...+.          ...++++.+++++++++++++..++|+|+|+++|++.+.
T Consensus       239 ~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~i~~~~~l~~~~~A~~~~~  318 (329)
T TIGR02822       239 PALEALDRGGVLAVAGIHLTDTPPLNYQRHLFYERQIRSVTSNTRADAREFLELAAQHGVRVTTHTYPLSEADRALRDLK  318 (329)
T ss_pred             HHHHhhCCCcEEEEEeccCccCCCCCHHHHhhCCcEEEEeecCCHHHHHHHHHHHHhCCCeeEEEEEeHHHHHHHHHHHH
Confidence            999999999999999975 22 223222111          123467888999999999986668999999999999999


Q ss_pred             cCCcceEEEE
Q 019199          328 KRDVKYRFVI  337 (344)
Q Consensus       328 ~~~~~gkvvi  337 (344)
                      +++..||+||
T Consensus       319 ~~~~~Gkvvl  328 (329)
T TIGR02822       319 AGRFDGAAVL  328 (329)
T ss_pred             cCCCceEEEe
Confidence            9999999987

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized.

>cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase)

Probab=100.00  E-value=1.3e-47  Score=356.95  Aligned_cols=327  Identities=24%  Similarity=0.394  Sum_probs=267.5

Q ss_pred             cceeeeeecCC------CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCC
Q 019199            8 KDCLGWAARDP------SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN   81 (344)
Q Consensus         8 ~~~~~~~~~~~------~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   81 (344)
                      ||+..+..++.      ++.+++++++.|+|.++||+||+.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+.
T Consensus         1 mka~~~~~~g~~~~~~~~~~l~~~~~~~P~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~   79 (371)
T cd08281           1 MRAAVLRETGAPTPYADSRPLVIEEVELDPPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAGVVVEVGEG   79 (371)
T ss_pred             CcceEEEecccccccccCCCceEEEeecCCCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCccceeEEEEeCCC
Confidence            45555555443      47789999999999999999999999999999999888654 356899999999999999999


Q ss_pred             CCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccc-cccccCC-------------CCccCCcceeEEEEecceEE
Q 019199           82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDAD-------------GTITKGGYSSYIVVHERYCY  147 (344)
Q Consensus        82 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~  147 (344)
                      ++++++||+|++.+. ..|+.|.+|+.|.++.|++.... ..+....             +....|+|+||+.++++.++
T Consensus        80 v~~~~~GdrV~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v~~~~~~  158 (371)
T cd08281          80 VTDLEVGDHVVLVFV-PSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVVSRRSVV  158 (371)
T ss_pred             CCcCCCCCEEEEccC-CCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEecccceE
Confidence            999999999987543 37999999999999999875321 1111100             00113799999999999999


Q ss_pred             EcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC
Q 019199          148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA  226 (344)
Q Consensus       148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~  226 (344)
                      ++|+++++.+|+.+++++.|||+++.....+++|++|||.|+|++|++++|+|+.+|+ +|++++.++++++.+ +++|+
T Consensus       159 ~lP~~l~~~~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~G~vG~~a~~lak~~G~~~Vi~~~~~~~r~~~a-~~~Ga  237 (371)
T cd08281         159 KIDKDVPLEIAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGLGGVGLSALLGAVAAGASQVVAVDLNEDKLALA-RELGA  237 (371)
T ss_pred             ECCCCCChHHhhhhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHcCC
Confidence            9999999999999999999999998766677999999999999999999999999999 699999999999888 78999


Q ss_pred             cEEEeCCCHHHHH---Hhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCceee---------e-
Q 019199          227 DKFVVSSDLEQMK---ALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLN---------I-  289 (344)
Q Consensus       227 ~~~v~~~~~~~~~---~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~~~~---------~-  289 (344)
                      +++++..+.+..+   +.+ +++|++||++|...++..++++++++|+++.+|.. .  ..+++...+.         + 
T Consensus       238 ~~~i~~~~~~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  317 (371)
T cd08281         238 TATVNAGDPNAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPEARLSVPALSLVAEERTLKGSYM  317 (371)
T ss_pred             ceEeCCCchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCCceeeecHHHHhhcCCEEEEEec
Confidence            9999887654332   332 47999999999877799999999999999999875 2  2233332211         1 


Q ss_pred             e---chHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          290 G---GTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       290 ~---~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      .   ..++++++++++++|++++  .+ ++|+++|+++||+.+.+++..+|+|+
T Consensus       318 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~  371 (371)
T cd08281         318 GSCVPRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL  371 (371)
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence            1   1467899999999999974  34 89999999999999999988888763

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd

>TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase

Probab=100.00  E-value=3.4e-47  Score=353.66  Aligned_cols=326  Identities=24%  Similarity=0.359  Sum_probs=265.4

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++.....++.+++++++.|+|.++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+.+++|++||+
T Consensus         3 ~a~~~~~~~~~l~~~~~~~P~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gdr   82 (368)
T TIGR02818         3 RAAVAWAAGQPLKIEEVDVEMPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAGIVEAVGEGVTSVKVGDH   82 (368)
T ss_pred             eEEEEecCCCCeEEEEecCCCCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEEEEEEECCCCccCCCCCE
Confidence            45555555667889999999999999999999999999999988887654567899999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccc-cccccC--------CC-----CccCCcceeEEEEecceEEEcCCCCCcc
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDA--------DG-----TITKGGYSSYIVVHERYCYKIANDYPLA  156 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~--------~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~~  156 (344)
                      |++.+. ..|++|.+|+.|..+.|++.... +.+...        .|     ....|+|+||+.+|++.++++|++++++
T Consensus        83 V~~~~~-~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~lP~~l~~~  161 (368)
T TIGR02818        83 VIPLYT-AECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEISLAKINPAAPLE  161 (368)
T ss_pred             EEEcCC-CCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhheEECCCCCCHH
Confidence            987654 48999999999999999874210 001100        01     0124799999999999999999999999


Q ss_pred             cccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC-
Q 019199          157 LAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD-  234 (344)
Q Consensus       157 ~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-  234 (344)
                      +++.+++++.|||+++.+...+++|++|||+|+|++|++++|+||.+|+ +|++++.++++++.+ +++|++++++..+ 
T Consensus       162 ~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a-~~~Ga~~~i~~~~~  240 (368)
T TIGR02818       162 EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGLGGIGLSVIQGARMAKASRIIAIDINPAKFELA-KKLGATDCVNPNDY  240 (368)
T ss_pred             HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCeEEccccc
Confidence            9999999999999998776677999999999999999999999999999 799999999999888 7899999988763 


Q ss_pred             -H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-C--ccccCCceee---------ee---chH
Q 019199          235 -L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-S--KVKFSPASLN---------IG---GTK  293 (344)
Q Consensus       235 -~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~--~~~~~~~~~~---------~~---~~~  293 (344)
                       .   +.+.+++ +++|++||++|++.++..++++++++ |+++.+|.. .  ...+..+.+.         ..   ...
T Consensus       241 ~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  320 (368)
T TIGR02818       241 DKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAGQEISTRPFQLVTGRVWRGSAFGGVKGRT  320 (368)
T ss_pred             chhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCCCcccccHHHHhccceEEEeeccCCCcHH
Confidence             2   2233333 58999999999877799999999886 999999975 2  2222222211         11   245


Q ss_pred             hHHHHHHHHHhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          294 DTQEMLEYCAAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       294 ~~~~~~~~~~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +++++++++.++++++  . .++|+++|+++|++.+.+++. .|++|.+
T Consensus       321 ~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~  368 (368)
T TIGR02818       321 ELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY  368 (368)
T ss_pred             HHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence            7899999999999864  3 489999999999999988764 6999874

The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols.

>cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like

Probab=100.00  E-value=5.2e-47  Score=349.12  Aligned_cols=318  Identities=25%  Similarity=0.379  Sum_probs=264.3

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      +++++. +++.+++++++.|+|.++||+||+.++++|++|++.+.+... ....|.++|||++|+|+++|+++++|++||
T Consensus         2 ka~~~~-~~~~l~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd   80 (339)
T cd08239           2 RGAVFP-GDRTVELREFPVPVPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAGVVVAVGPGVTHFRVGD   80 (339)
T ss_pred             eEEEEe-cCCceEEEecCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceEEEEEECCCCccCCCCC
Confidence            344444 456789999999999999999999999999999988766533 223578999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|+..+.. .|++|..|++|+.+.|.+..+.+      |....|+|++|+.++++.++++|+++++.+|+.+++++.|||
T Consensus        81 ~V~~~~~~-~c~~c~~c~~g~~~~c~~~~~~~------g~~~~G~~ae~~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~  153 (339)
T cd08239          81 RVMVYHYV-GCGACRNCRRGWMQLCTSKRAAY------GWNRDGGHAEYMLVPEKTLIPLPDDLSFADGALLLCGIGTAY  153 (339)
T ss_pred             EEEECCCC-CCCCChhhhCcCcccCcCccccc------ccCCCCcceeEEEechHHeEECCCCCCHHHhhhhcchHHHHH
Confidence            99886654 89999999999999998764311      223569999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHHhc--CC
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKALG--KS  244 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~~--~~  244 (344)
                      +++.... +++|++|||+|+|++|++++|+|+.+|++ |+++++++++++.+ +++|++.++++++.+  .+.+..  ++
T Consensus       154 ~~l~~~~-~~~g~~vlV~G~G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~~~~~~~~~~  231 (339)
T cd08239         154 HALRRVG-VSGRDTVLVVGAGPVGLGALMLARALGAEDVIGVDPSPERLELA-KALGADFVINSGQDDVQEIRELTSGAG  231 (339)
T ss_pred             HHHHhcC-CCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEcCCcchHHHHHHHhCCCC
Confidence            9997665 48899999999999999999999999997 99999999998888 789999999876543  222332  47


Q ss_pred             ccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCc-eee----------eechHhHHHHHHHHHhCCCcc--ce
Q 019199          245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA-SLN----------IGGTKDTQEMLEYCAAHKIYP--QI  311 (344)
Q Consensus       245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~-~~~----------~~~~~~~~~~~~~~~~g~~~~--~~  311 (344)
                      +|++||++|+...+..++++++++|+++.+|......+... .+.          ....++++++++++.+|++++  .+
T Consensus       232 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i  311 (339)
T cd08239         232 ADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELTIEVSNDLIRKQRTLIGSWYFSVPDMEECAEFLARHKLEVDRLV  311 (339)
T ss_pred             CCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcccCcHHHHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCChhHeE
Confidence            99999999998767899999999999999997632222211 111          223478999999999999864  34


Q ss_pred             -EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          312 -ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                       ++|+++++++||+.+.+++ .||+||++
T Consensus       312 ~~~~~l~~~~~a~~~~~~~~-~gKvvi~~  339 (339)
T cd08239         312 THRFGLDQAPEAYALFAQGE-SGKVVFVF  339 (339)
T ss_pred             EEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence             8999999999999998875 79999864

MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at

>PLN02740 Alcohol dehydrogenase-like

Probab=100.00  E-value=5.4e-47  Score=353.89  Aligned_cols=331  Identities=23%  Similarity=0.384  Sum_probs=269.0

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      .++.++++.+.++++.+.+++++.|+|.++||+||+.++|+|++|++.+.|... ...+|.++|||++|+|+++|+++++
T Consensus         7 ~~~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~   86 (381)
T PLN02740          7 KVITCKAAVAWGPGEPLVMEEIRVDPPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAGIVESVGEGVED   86 (381)
T ss_pred             cceeeEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceEEEEEeCCCCCc
Confidence            345677777766555688899999999999999999999999999999888653 3357899999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccc-ccccc-CCC---------------CccCCcceeEEEEecceEE
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAID-ADG---------------TITKGGYSSYIVVHERYCY  147 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~-~~~---------------~~~~g~~~~~~~~~~~~~~  147 (344)
                      |++||+|++.+.. +|++|.+|..|..+.|++.... +.... .+|               ....|+|+||++++++.++
T Consensus        87 ~~vGdrV~~~~~~-~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~  165 (381)
T PLN02740         87 LKAGDHVIPIFNG-ECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEYTVLDSACVV  165 (381)
T ss_pred             CCCCCEEEecCCC-CCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeEEEEehHHeE
Confidence            9999999887654 8999999999999999885321 10000 000               0125899999999999999


Q ss_pred             EcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC
Q 019199          148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA  226 (344)
Q Consensus       148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~  226 (344)
                      ++|+++++++++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+
T Consensus       166 ~iP~~~~~~~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~G~vG~~a~q~ak~~G~~~Vi~~~~~~~r~~~a-~~~Ga  244 (381)
T PLN02740        166 KIDPNAPLKKMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGLGAVGLAVAEGARARGASKIIGVDINPEKFEKG-KEMGI  244 (381)
T ss_pred             ECCCCCCHHHhhhhcccchhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHCCCCcEEEEcCChHHHHHH-HHcCC
Confidence            9999999999999999999999988776677999999999999999999999999999 699999999999988 78999


Q ss_pred             cEEEeCCCH-----HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-Cc--cccCCc------eee--
Q 019199          227 DKFVVSSDL-----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SK--VKFSPA------SLN--  288 (344)
Q Consensus       227 ~~~v~~~~~-----~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~--~~~~~~------~~~--  288 (344)
                      +.+++..+.     +.+.+.. +++|++||++|++..+..++++++++ |+++.+|.. ..  ..++..      .+.  
T Consensus       245 ~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~  324 (381)
T PLN02740        245 TDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPKMLPLHPMELFDGRSITGS  324 (381)
T ss_pred             cEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCceecccHHHHhcCCeEEEE
Confidence            998887642     2233333 47999999999877799999999996 999999976 21  222221      111  


Q ss_pred             -eec---hHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          289 -IGG---TKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       289 -~~~---~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                       .+.   ..++.++++++.++.+++  .+ ++|+++|+++|++.+.+++. .|++|++
T Consensus       325 ~~~~~~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~~  381 (381)
T PLN02740        325 VFGDFKGKSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLHL  381 (381)
T ss_pred             ecCCCCcHHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEeC
Confidence             111   357889999999999865  34 89999999999999988875 5999874

>PLN02827 Alcohol dehydrogenase-like

Probab=100.00  E-value=1.5e-46  Score=350.13  Aligned_cols=327  Identities=21%  Similarity=0.318  Sum_probs=265.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ..+++++.+++.+.++++++++|+|+++||+|||.++|+|++|++.+.+..   .+|.++|||++|+|+++|+++++|++
T Consensus        11 ~~mka~~~~~~~~~~~~~e~~~P~~~~~eVlVkv~~~gic~sD~~~~~g~~---~~p~i~GhE~~G~V~~vG~~v~~~~~   87 (378)
T PLN02827         11 ITCRAAVAWGAGEALVMEEVEVSPPQPLEIRIKVVSTSLCRSDLSAWESQA---LFPRIFGHEASGIVESIGEGVTEFEK   87 (378)
T ss_pred             ceeEEEEEecCCCCceEEEeecCCCCCCEEEEEEEEEecChhHHHHhcCCC---CCCeeecccceEEEEEcCCCCcccCC
Confidence            456677776666678899999999999999999999999999998887642   45789999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCcccccccccc---------CCC-----CccCCcceeEEEEecceEEEcCCCC
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID---------ADG-----TITKGGYSSYIVVHERYCYKIANDY  153 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~---------~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~  153 (344)
                      ||+|+..+.. .|++|.+|++|.++.|++......+..         ..|     ....|+|+||+.+++..++++|+++
T Consensus        88 GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~~~~~~iP~~l  166 (378)
T PLN02827         88 GDHVLTVFTG-ECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHSGCAVKVDPLA  166 (378)
T ss_pred             CCEEEEecCC-CCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEechhheEECCCCC
Confidence            9999887654 799999999999999987422111100         000     0124899999999999999999999


Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++++++++++.++|+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|++++.++++.+.+ +++|++++++.
T Consensus       167 ~~~~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~a-~~lGa~~~i~~  245 (378)
T PLN02827        167 PLHKICLLSCGVAAGLGAAWNVADVSKGSSVVIFGLGTVGLSVAQGAKLRGASQIIGVDINPEKAEKA-KTFGVTDFINP  245 (378)
T ss_pred             CHHHhhhhcchhHhhHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCcEEEcc
Confidence            9999999999989999877666667999999999999999999999999999 577788788888888 78999999987


Q ss_pred             CCH--H---HHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-CccccCCc-eee------ee-------
Q 019199          233 SDL--E---QMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SKVKFSPA-SLN------IG-------  290 (344)
Q Consensus       233 ~~~--~---~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~~~~~~~-~~~------~~-------  290 (344)
                      ++.  +   .+.+.+ +++|++||++|....+..+++.++++ |+++.+|.. ....+... .+.      .+       
T Consensus       246 ~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  325 (378)
T PLN02827        246 NDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAKPEVSAHYGLFLSGRTLKGSLFGGWK  325 (378)
T ss_pred             cccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCCccccccHHHHhcCceEEeeecCCCc
Confidence            642  2   223333 47999999999876699999999998 999999976 22222211 111      11       


Q ss_pred             chHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          291 GTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       291 ~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      ...+++++++++++|++++  .+ ++|+++|+.+|++.+.+++. +|+||+++
T Consensus       326 ~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~  377 (378)
T PLN02827        326 PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP  377 (378)
T ss_pred             hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence            2357889999999999987  44 89999999999999998876 69999875

>COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only]

Probab=100.00  E-value=4.5e-47  Score=344.27  Aligned_cols=298  Identities=27%  Similarity=0.402  Sum_probs=248.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC-CCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      |++..+..++.+..+++++++.|.|++|||||||.++|+|+.|...++|. .+..++|.++|.|++|+|+++|+.++.|+
T Consensus         1 mka~~~~~~g~~~~l~~~e~~~P~p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG~V~avG~~V~~~~   80 (326)
T COG0604           1 MKAVVVEEFGGPEVLKVVEVPEPEPGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAGVVVAVGSGVTGFK   80 (326)
T ss_pred             CeEEEEeccCCCceeEEEecCCCCCCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEEEEEEeCCCCCCcC
Confidence            34555555556666999999999999999999999999999999999987 33556899999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+....     .                           ...|+|+||+.+|++.++++|+++++++||++++++.
T Consensus        81 ~GdrV~~~~~-----~---------------------------~~~G~~AEy~~v~a~~~~~~P~~ls~~eAAal~~~~~  128 (326)
T COG0604          81 VGDRVAALGG-----V---------------------------GRDGGYAEYVVVPADWLVPLPDGLSFEEAAALPLAGL  128 (326)
T ss_pred             CCCEEEEccC-----C---------------------------CCCCcceeEEEecHHHceeCCCCCCHHHHHHHHHHHH
Confidence            9999975320     0                           0459999999999999999999999999999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG  242 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~  242 (344)
                      |||+++.....+++|++|||+|+ |++|.+++|+||++|+++++++.++++.+.+ +++|+++++++++.++.+   +++
T Consensus       129 TA~~~l~~~~~l~~g~~VLV~gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~-~~lGAd~vi~y~~~~~~~~v~~~t  207 (326)
T COG0604         129 TAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAVVSSSEKLELL-KELGADHVINYREEDFVEQVRELT  207 (326)
T ss_pred             HHHHHHHHhcCCCCCCEEEEecCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHc
Confidence            99999999888899999999986 9999999999999998888888888888755 899999999988765433   344


Q ss_pred             --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCceee-----------eec-----hHhHHHHHHH
Q 019199          243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLN-----------IGG-----TKDTQEMLEY  301 (344)
Q Consensus       243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~-----------~~~-----~~~~~~~~~~  301 (344)
                        +++|+|||++|+.. +...+++|+++|+++.+|...   ...++...+.           ...     .+.++++.++
T Consensus       208 ~g~gvDvv~D~vG~~~-~~~~l~~l~~~G~lv~ig~~~g~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~  286 (326)
T COG0604         208 GGKGVDVVLDTVGGDT-FAASLAALAPGGRLVSIGALSGGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDL  286 (326)
T ss_pred             CCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEecCCCCCccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHH
Confidence              47999999999987 999999999999999999863   1112212111           222     3578889999


Q ss_pred             HHhCCCccce-EEEeCccHHHHHHHHHc-CCcceEEEEEe
Q 019199          302 CAAHKIYPQI-ETIPIENVNEALERLIK-RDVKYRFVIDI  339 (344)
Q Consensus       302 ~~~g~~~~~~-~~~~~~~~~~a~~~~~~-~~~~gkvvi~~  339 (344)
                      +++|.+++.+ .+||++|..++...... ++..||+|+.+
T Consensus       287 ~~~g~l~~~i~~~~~l~e~~~a~a~~~~~~~~~GKvvl~~  326 (326)
T COG0604         287 LASGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV  326 (326)
T ss_pred             HHcCCCcceeccEechhhhHHHHHHHHcccCCcceEEEeC
Confidence            9999999998 69999996555554444 48889999874

>TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase

Probab=100.00  E-value=1.1e-46  Score=349.31  Aligned_cols=324  Identities=24%  Similarity=0.387  Sum_probs=263.7

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++++..+..+++++++++.|+|+++||+||+.++|+|++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++||+
T Consensus         3 ka~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~Gdr   81 (358)
T TIGR03451         3 RGVIARSKGAPVELETIVVPDPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAGVVEAVGEGVTDVAPGDY   81 (358)
T ss_pred             EEEEEccCCCCCEEEEEECCCCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEEEEEEeCCCCcccCCCCE
Confidence            3444444445688999999999999999999999999999998887654 357889999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCcccccccccc-CCC-----CccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID-ADG-----TITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~-~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++.+. ..|+.|.+|..|..++|........... .+|     ....|+|+||+.+++..++++|+++++++++.+++.
T Consensus        82 V~~~~~-~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~ip~~~~~~~aa~l~~~  160 (358)
T TIGR03451        82 VVLNWR-AVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKVDPAADPAAAGLLGCG  160 (358)
T ss_pred             EEEccC-CCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEECCCCCChhHhhhhccc
Confidence            987665 4799999999999999986321110000 001     012589999999999999999999999999999999


Q ss_pred             hhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHH
Q 019199          165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKA  240 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~  240 (344)
                      +.|+|+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++.+++..+.+.   +.+
T Consensus       161 ~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~i~~  239 (358)
T TIGR03451       161 VMAGLGAAVNTGGVKRGDSVAVIGCGGVGDAAIAGAALAGASKIIAVDIDDRKLEWA-REFGATHTVNSSGTDPVEAIRA  239 (358)
T ss_pred             chhhHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcCCCcCHHHHHHH
Confidence            99999888777777999999999999999999999999999 599999999999888 7899999998765433   333


Q ss_pred             hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc--cccCCceee---------e----echHhHHHHHHHH
Q 019199          241 LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK--VKFSPASLN---------I----GGTKDTQEMLEYC  302 (344)
Q Consensus       241 ~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~--~~~~~~~~~---------~----~~~~~~~~~~~~~  302 (344)
                      .+  +++|++||++|++.++..++++++++|+++.+|.. ..  .+++...+.         +    ...+.++++++++
T Consensus       240 ~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~  319 (358)
T TIGR03451       240 LTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPDMTLELPLLDVFGRGGALKSSWYGDCLPERDFPMLVDLY  319 (358)
T ss_pred             HhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCceeeccHHHHhhcCCEEEEeecCCCCcHHHHHHHHHHH
Confidence            33  47999999999877799999999999999999976 22  233321111         1    1246789999999


Q ss_pred             HhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          303 AAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       303 ~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++|++++  . .++|+++|+++|++.+.+++.. |++|.
T Consensus       320 ~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~  357 (358)
T TIGR03451       320 LQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE  357 (358)
T ss_pred             HcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence            9999975  3 4899999999999999888765 77765

Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione.

>cd08300 alcohol_DH_class_III class III alcohol dehydrogenases

Probab=100.00  E-value=2.1e-46  Score=348.55  Aligned_cols=326  Identities=25%  Similarity=0.378  Sum_probs=265.1

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      ++++.....++++++++++.|+|.++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         3 ~~a~~~~~~~~~~~~~~~~~P~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGd   82 (368)
T cd08300           3 CKAAVAWEAGKPLSIEEVEVAPPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAGIVESVGEGVTSVKPGD   82 (368)
T ss_pred             ceEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeEEEEEeCCCCccCCCCC
Confidence            34455445567789999999999999999999999999999999888765556789999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccc-cccccC--------CC-----CccCCcceeEEEEecceEEEcCCCCCc
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDA--------DG-----TITKGGYSSYIVVHERYCYKIANDYPL  155 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~--------~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~  155 (344)
                      +|+..+. .+|++|.+|++|+++.|++.... +.+...        +|     ....|+|+||+.++++.++++|+++++
T Consensus        83 rV~~~~~-~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~l~~  161 (368)
T cd08300          83 HVIPLYT-PECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEISVAKINPEAPL  161 (368)
T ss_pred             EEEEcCC-CCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchhceEeCCCCCCh
Confidence            9987644 58999999999999999874211 001000        00     012479999999999999999999999


Q ss_pred             ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       156 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      .+++.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++.+
T Consensus       162 ~~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~-~~lGa~~~i~~~~  240 (368)
T cd08300         162 DKVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGLGAVGLAVIQGAKAAGASRIIGIDINPDKFELA-KKFGATDCVNPKD  240 (368)
T ss_pred             hhhhhhccchhhhHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCEEEcccc
Confidence            99999999999999988776677999999999999999999999999999 799999999999888 7899999998765


Q ss_pred             H--HH---HHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-Cc--cccCCceee------------eech
Q 019199          235 L--EQ---MKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SK--VKFSPASLN------------IGGT  292 (344)
Q Consensus       235 ~--~~---~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~--~~~~~~~~~------------~~~~  292 (344)
                      .  +.   +.+.+ +++|++||++|+...+..++++++++ |+++.+|.. ..  ..+....+.            +...
T Consensus       241 ~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~  320 (368)
T cd08300         241 HDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAGQEISTRPFQLVTGRVWKGTAFGGWKSR  320 (368)
T ss_pred             cchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCCCccccCHHHHhhcCeEEEEEecccCcH
Confidence            3  12   22333 57999999999876799999999886 999999875 21  222221110            1234


Q ss_pred             HhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          293 KDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       293 ~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++++++++++.++++++  .+ ++|+|+|+++||+.+.+++. .|++++
T Consensus       321 ~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~  368 (368)
T cd08300         321 SQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK  368 (368)
T ss_pred             HHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence            67899999999999975  34 89999999999999988764 588874

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim

>cd08301 alcohol_DH_plants Plant alcohol dehydrogenase

Probab=100.00  E-value=3.4e-46  Score=347.41  Aligned_cols=327  Identities=23%  Similarity=0.365  Sum_probs=265.6

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++++++....++.+++++++.|+|+++||+||+.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|++|
T Consensus         2 ~~ka~~~~~~~~~~~l~~~~~p~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~G   81 (369)
T cd08301           2 TCKAAVAWEAGKPLVIEEVEVAPPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAGIVESVGEGVTDLKPG   81 (369)
T ss_pred             ccEEEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccceEEEEeCCCCCccccC
Confidence            34455555556678999999999999999999999999999999988876556778999999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCcccccc-cccc---------CCC-----CccCCcceeEEEEecceEEEcCCCC
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAID---------ADG-----TITKGGYSSYIVVHERYCYKIANDY  153 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~~---------~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~  153 (344)
                      |+|++.+. ..|++|.+|.+|.++.|.+..... .+..         ..|     ....|+|+||+++++..++++|+++
T Consensus        82 drV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~~~  160 (369)
T cd08301          82 DHVLPVFT-GECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHVGCVAKINPEA  160 (369)
T ss_pred             CEEEEccC-CCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEecccEEECCCCC
Confidence            99987654 489999999999999998753210 0000         000     0134889999999999999999999


Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++++.+++.+.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++.+++.
T Consensus       161 ~~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~~-~~~Ga~~~i~~  239 (369)
T cd08301         161 PLDKVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGLGAVGLAVAEGARIRGASRIIGVDLNPSKFEQA-KKFGVTEFVNP  239 (369)
T ss_pred             CHHHhhhhcchhhHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEEcc
Confidence            9999999999999999988776777999999999999999999999999999 899999999999888 78999988887


Q ss_pred             CC--HH---HHHHh-cCCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC---ccccCCceee-----e-------e
Q 019199          233 SD--LE---QMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS---KVKFSPASLN-----I-------G  290 (344)
Q Consensus       233 ~~--~~---~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~~-----~-------~  290 (344)
                      .+  ..   .+.+. .+++|++||++|....+..++++++++ |+++.+|...   ..+++...+.     .       .
T Consensus       240 ~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~  319 (369)
T cd08301         240 KDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDAVFSTHPMNLLNGRTLKGTLFGGYK  319 (369)
T ss_pred             cccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCcccccCHHHHhcCCeEEEEecCCCC
Confidence            64  22   22333 357999999999877789999999996 9999999762   2223222111     1       1


Q ss_pred             chHhHHHHHHHHHhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          291 GTKDTQEMLEYCAAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       291 ~~~~~~~~~~~~~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .+++++++++++.++.++.  . .++|+++|+++|++.+.+++. .|+++.
T Consensus       320 ~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-~k~~~~  369 (369)
T cd08301         320 PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGEC-LRCILH  369 (369)
T ss_pred             hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCc-eeEEeC
Confidence            2357889999999998864  3 489999999999999999885 488873

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the

>cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase

Probab=100.00  E-value=5e-46  Score=345.63  Aligned_cols=326  Identities=25%  Similarity=0.420  Sum_probs=266.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++.++++.++.++.+++++++.|.++++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++++++
T Consensus         1 ~~~ka~~~~~~~~~~~~~~~~~p~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08277           1 IKCKAAVAWEAGKPLVIEEIEVAPPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAGIVESVGEGVTNLKP   79 (365)
T ss_pred             CccEEEEEccCCCCcEEEEEECCCCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeEEEEeeCCCCccCCC
Confidence            3556676665666789999999999999999999999999999999888654 467899999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCC-------------CccCCcceeEEEEecceEEEcCCCCC
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADG-------------TITKGGYSSYIVVHERYCYKIANDYP  154 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~P~~~~  154 (344)
                      ||+|+..+. .+|++|.+|.+|.++.|++..+...+...++             ....|+|+||+.++++.++++|++++
T Consensus        80 GdrV~~~~~-~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~~~~~lP~~l~  158 (365)
T cd08277          80 GDKVIPLFI-GQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDENYVAKIDPAAP  158 (365)
T ss_pred             CCEEEECCC-CCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchhheEECCCCCC
Confidence            999987554 4899999999999999998654322222211             01248999999999999999999999


Q ss_pred             cccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       155 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                      +.+++.+++++.|||+++.....+++|++|||+|+|++|++++++|+.+|+ +|+++++++++++.+ +++|++++++..
T Consensus       159 ~~~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~-~~~ga~~~i~~~  237 (365)
T cd08277         159 LEHVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGLGAVGLSAIMGAKIAGASRIIGVDINEDKFEKA-KEFGATDFINPK  237 (365)
T ss_pred             HHHhhHhcchhHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCCcEeccc
Confidence            999999999999999988776777999999999999999999999999999 799999999999888 789999988875


Q ss_pred             CH-----HHHHHh-cCCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC--ccccCCceee---------ee---ch
Q 019199          234 DL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS--KVKFSPASLN---------IG---GT  292 (344)
Q Consensus       234 ~~-----~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~~---------~~---~~  292 (344)
                      +.     +.+.+. .+++|++||++|+...+..++++++++ |+++.+|...  ...++...+.         .+   ..
T Consensus       238 ~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  317 (365)
T cd08277         238 DSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAELSIRPFQLILGRTWKGSFFGGFKSR  317 (365)
T ss_pred             cccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCccccccCHhHHhhCCEEEeeecCCCChH
Confidence            42     223333 367999999999877789999999885 9999998752  2222221111         11   13


Q ss_pred             HhHHHHHHHHHhCCCc--cce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          293 KDTQEMLEYCAAHKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       293 ~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      .++++++++++++.++  +.+ ++|+++|+++|++.+.+++ ..|+++
T Consensus       318 ~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i  364 (365)
T cd08277         318 SDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI  364 (365)
T ss_pred             HHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence            5789999999999775  344 8999999999999998887 468886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i

>COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only]

Probab=100.00  E-value=2.9e-45  Score=336.69  Aligned_cols=319  Identities=27%  Similarity=0.396  Sum_probs=251.1

Q ss_pred             ecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCC-CcccccceEEEEecCCCCCCCCCCEEEE
Q 019199           15 ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL-VPGHEIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        15 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~-~~G~e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      .+.+++..++++.+.|.+.+++|+|||.++|||++|++.+++..+....|. ++|||++|+|+++| .++.+++||||++
T Consensus         6 ~~~~~~~~~~~~~~~p~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G~V~evG-~~~~~~~GdrVvv   84 (350)
T COG1063           6 VYVGGGDVRLEEPPPPIPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVGEVVEVG-VVRGFKVGDRVVV   84 (350)
T ss_pred             EEecCCccccccCCCCCCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceEEEEEec-cccCCCCCCEEEE
Confidence            333444444666666778999999999999999999999999876566666 99999999999999 7778999999998


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce-EEEcCCCCCcccccccchhhhHhHHHH
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY-CYKIANDYPLALAAPLLCAGITVYTPM  172 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~P~~~~~~~aa~l~~~~~ta~~~l  172 (344)
                      .+.. .|+.|.+|+.|.++.|++..  +.+....+...+|+|+||+.+|.+. +.++|+++ +.+++++..++.+++++.
T Consensus        85 ~~~~-~Cg~C~~C~~G~~~~C~~~~--~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~~-~~~~aal~epla~~~~~~  160 (350)
T COG1063          85 EPNI-PCGHCRYCRAGEYNLCENPG--FYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDGI-DEEAAALTEPLATAYHGH  160 (350)
T ss_pred             CCCc-CCCCChhHhCcCcccCCCcc--ccccccccCCCCCceEEEEEeccccCeecCCCCC-ChhhhhhcChhhhhhhhh
Confidence            8765 89999999999999999542  1111111112679999999999755 55568998 777777888999997774


Q ss_pred             HhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH---HHHHhc--CCcc
Q 019199          173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG--KSLD  246 (344)
Q Consensus       173 ~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~~--~~~d  246 (344)
                      ......+++++|+|+|+|++|++++++++.+|+ +|++++.+++|++.+++.+|++.+++....+   ...+.+  .++|
T Consensus       161 a~~~~~~~~~~V~V~GaGpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~~~~~~~~~~t~g~g~D  240 (350)
T COG1063         161 AERAAVRPGGTVVVVGAGPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTGGRGAD  240 (350)
T ss_pred             hhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccccHHHHHHHHhCCCCCC
Confidence            334433666699999999999999999999998 8899999999999995447788777665432   223343  4699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCC-Ccc-ccCCceee------ee-----chHhHHHHHHHHHhCCCccc---
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKV-KFSPASLN------IG-----GTKDTQEMLEYCAAHKIYPQ---  310 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~-~~~~~~~~------~~-----~~~~~~~~~~~~~~g~~~~~---  310 (344)
                      ++|||+|...++.++++.++++|+++.+|.. ... .++...+.      .+     ...+++.+++++++|++++.   
T Consensus       241 ~vie~~G~~~~~~~ai~~~r~gG~v~~vGv~~~~~~~~~~~~~~~kel~l~gs~~~~~~~~~~~~~~ll~~g~i~~~~li  320 (350)
T COG1063         241 VVIEAVGSPPALDQALEALRPGGTVVVVGVYGGEDIPLPAGLVVSKELTLRGSLRPSGREDFERALDLLASGKIDPEKLI  320 (350)
T ss_pred             EEEECCCCHHHHHHHHHHhcCCCEEEEEeccCCccCccCHHHHHhcccEEEeccCCCCcccHHHHHHHHHcCCCChhHce
Confidence            9999999988899999999999999999988 332 33332222      22     23579999999999999864   


Q ss_pred             eEEEeCccHHHHHHHHHcCCc-ceEEEEE
Q 019199          311 IETIPIENVNEALERLIKRDV-KYRFVID  338 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~-~gkvvi~  338 (344)
                      .++++++++++|++.+.+.+. .-|+++.
T Consensus       321 t~~~~~~~~~~a~~~~~~~~~~~~Kv~i~  349 (350)
T COG1063         321 THRLPLDDAAEAYELFADRKEEAIKVVLK  349 (350)
T ss_pred             EeeccHHHHHHHHHHHHhcCCCeEEEEec
Confidence            488999999999999998654 4688875

>KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=1.2e-45  Score=306.18  Aligned_cols=301  Identities=22%  Similarity=0.320  Sum_probs=264.9

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      .+.+.+.....++.+.+++++.|.|+|+++|.+||..|+|+|..|..+++|.+...+.|.++|-|.+|+|+++|+.++++
T Consensus         7 ~~~k~i~v~e~Ggydvlk~ed~pv~~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaaGvVvAvG~gvtdr   86 (336)
T KOG1197|consen    7 PLLKCIVVTEFGGYDVLKLEDRPVPPPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAAGVVVAVGEGVTDR   86 (336)
T ss_pred             chheEEEEeccCCcceEEEeeecCCCCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccceEEEEecCCcccc
Confidence            45566666667788999999999999999999999999999999999999998777889999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||||+..                                   ...|.|+++.++|...++++|+.+++.+||++...+
T Consensus        87 kvGDrVayl-----------------------------------~~~g~yaee~~vP~~kv~~vpe~i~~k~aaa~llq~  131 (336)
T KOG1197|consen   87 KVGDRVAYL-----------------------------------NPFGAYAEEVTVPSVKVFKVPEAITLKEAAALLLQG  131 (336)
T ss_pred             ccccEEEEe-----------------------------------ccchhhheeccccceeeccCCcccCHHHHHHHHHHH
Confidence            999999753                                   356899999999999999999999999999999999


Q ss_pred             hHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---  241 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---  241 (344)
                      .|||.-+.+...+++|++||++.+ |++|+++.|++++.|++++.+.+..++.+.+ ++.|+++.|+++.++..++.   
T Consensus       132 lTAy~ll~e~y~vkpGhtVlvhaAAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~a-kenG~~h~I~y~~eD~v~~V~ki  210 (336)
T KOG1197|consen  132 LTAYMLLFEAYNVKPGHTVLVHAAAGGVGLLLCQLLRAVGAHTIATASTAEKHEIA-KENGAEHPIDYSTEDYVDEVKKI  210 (336)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEeccccHHHHHHHHHHhcCcEEEEEeccHHHHHHH-HhcCCcceeeccchhHHHHHHhc
Confidence            999999999999999999999975 9999999999999999999999999999888 79999999999998877665   


Q ss_pred             --cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC----CccccCCceee------------eechH----hHHHHH
Q 019199          242 --GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP----SKVKFSPASLN------------IGGTK----DTQEML  299 (344)
Q Consensus       242 --~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~~~~~~------------~~~~~----~~~~~~  299 (344)
                        ++|+|+++|.+|... +...+.+|++.|+++.+|..    ...+++.++..            ...+.    -..+++
T Consensus       211 TngKGVd~vyDsvG~dt-~~~sl~~Lk~~G~mVSfG~asgl~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~  289 (336)
T KOG1197|consen  211 TNGKGVDAVYDSVGKDT-FAKSLAALKPMGKMVSFGNASGLIDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLF  289 (336)
T ss_pred             cCCCCceeeeccccchh-hHHHHHHhccCceEEEeccccCCCCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHH
Confidence              379999999999876 99999999999999999976    22222222111            11122    346677


Q ss_pred             HHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          300 EYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       300 ~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                      .++.+|.+++.+ ++||++++.+|+.++++++..||+++...++.
T Consensus       290 alvnsg~lk~~I~~~ypls~vadA~~diesrktvGkvlLlp~~~~  334 (336)
T KOG1197|consen  290 ALVNSGHLKIHIDHVYPLSKVADAHADIESRKTVGKVLLLPGPEK  334 (336)
T ss_pred             HHhhcCccceeeeeecchHHHHHHHHHHHhhhccceEEEeCCccc
Confidence            888899999988 89999999999999999999999999988764

>TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase

Probab=100.00  E-value=3.8e-45  Score=337.83  Aligned_cols=313  Identities=25%  Similarity=0.415  Sum_probs=258.1

Q ss_pred             ecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC-CCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199           15 ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        15 ~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      +.++.+.+++++.|.|+|.++||+||+.++|+|++|++.+.+. .....+|.++|||++|+|+++|+.++.+ +||+|++
T Consensus         4 ~~~~g~~~~~~~~p~P~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~-~GdrV~~   82 (349)
T TIGR03201         4 MTEPGKPMVKTRVEIPELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISGRVIQAGAGAASW-IGKAVIV   82 (349)
T ss_pred             EecCCCCceEEeccCCCCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceEEEEEeCCCcCCC-CCCEEEE
Confidence            3333344888999999999999999999999999999876433 2234568899999999999999999887 9999987


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCC------CCCcccccccchhhhH
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN------DYPLALAAPLLCAGIT  167 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~------~~~~~~aa~l~~~~~t  167 (344)
                      .+.. +|++|.+|+.|+++.|+.....       |....|+|+||+.++++.++++|+      ++++++++++++.+.|
T Consensus        83 ~~~~-~cg~c~~c~~g~~~~c~~~~~~-------g~~~~G~~ae~~~v~~~~~~~ip~~~~~~~~~~~~~~a~~~~~~~t  154 (349)
T TIGR03201        83 PAVI-PCGECELCKTGRGTICRAQKMP-------GNDMQGGFASHIVVPAKGLCVVDEARLAAAGLPLEHVSVVADAVTT  154 (349)
T ss_pred             CCCC-CCCCChhhhCcCcccCCCCCcc-------CcCCCCcccceEEechHHeEECCcccccccCCCHHHhhhhcchHHH
Confidence            6654 8999999999999999864321       222358999999999999999999      8999999999999999


Q ss_pred             hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH---HH---HHHh
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQ---MKAL  241 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~~---~~~~  241 (344)
                      +|+++... .+++|++|+|+|+|++|++++++|+.+|++|+++++++++++.+ +++|++++++..+.   +.   +.+.
T Consensus       155 a~~a~~~~-~~~~g~~VlV~G~G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~  232 (349)
T TIGR03201       155 PYQAAVQA-GLKKGDLVIVIGAGGVGGYMVQTAKAMGAAVVAIDIDPEKLEMM-KGFGADLTLNPKDKSAREVKKLIKAF  232 (349)
T ss_pred             HHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceEecCccccHHHHHHHHHhh
Confidence            99998764 45999999999999999999999999999999999999999888 78999998887553   22   2233


Q ss_pred             c--CCcc----EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee------e----echHhHHHHHHHHHh
Q 019199          242 G--KSLD----FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------I----GGTKDTQEMLEYCAA  304 (344)
Q Consensus       242 ~--~~~d----vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~----~~~~~~~~~~~~~~~  304 (344)
                      +  +++|    ++||++|+...+..++++++++|+++.+|.. ....++...+.      .    ...++++++++++.+
T Consensus       233 t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i~~  312 (349)
T TIGR03201       233 AKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAKTEYRLSNLMAFHARALGNWGCPPDRYPAALDLVLD  312 (349)
T ss_pred             cccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCCcccCHHHHhhcccEEEEEecCCHHHHHHHHHHHHc
Confidence            3  4665    8999999987788999999999999999976 22233222211      1    134689999999999


Q ss_pred             CCCcc--ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          305 HKIYP--QIETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       305 g~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      |++++  .+++|+++|+++||+.+.+++..||++++
T Consensus       313 g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~  348 (349)
T TIGR03201       313 GKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILT  348 (349)
T ss_pred             CCCCcccceEEecHHHHHHHHHHHHcCCccceEEec
Confidence            99965  45789999999999999999988999885

Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA.

>TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent

Probab=100.00  E-value=1.4e-44  Score=337.56  Aligned_cols=321  Identities=21%  Similarity=0.281  Sum_probs=247.1

Q ss_pred             eeeecCCCCCccceeeccCCCC-------CCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC
Q 019199           12 GWAARDPSGVLSPYSFNRRAVG-------SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~-------~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      ++++. .++.+++++++.|+|+       +|||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|+++++
T Consensus         5 a~v~~-~~~~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G~V~~vG~~V~~   82 (393)
T TIGR02819         5 GVVYL-GPGKVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITGEVIEKGRDVEF   82 (393)
T ss_pred             EEEEe-cCCceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEEEEEEEcCcccc
Confidence            44443 4557889999999874       68999999999999999999887643 356899999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccc----cccccCCCCccCCcceeEEEEecc--eEEEcCCCCCc---
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT----FNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPL---  155 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~---  155 (344)
                      |++||||++.+.. .|++|.+|++|+++.|.+....    +.+....+ ...|+|+||+.+|+.  .++++|++++.   
T Consensus        83 ~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~-~~~G~~aey~~v~~~~~~l~~vP~~~~~~~~  160 (393)
T TIGR02819        83 IKIGDIVSVPFNI-ACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMG-GWVGGQSEYVMVPYADFNLLKFPDRDQALEK  160 (393)
T ss_pred             ccCCCEEEEeccc-CCCCChHHHCcCcccCcCCCCCCccceecccccC-CCCCceEEEEEechhhCceEECCCccccccc
Confidence            9999999887654 7999999999999999974211    11110001 135999999999964  69999998754   


Q ss_pred             -ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEE-EEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          156 -ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT-VLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       156 -~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                       .+++++.+.+.++|+++.. ..+++|++|||.|+|++|++++|+|+.+|++++ +++.+++|++.+ +++|++. ++..
T Consensus       161 ~~~~a~l~~~~~ta~~a~~~-~~~~~g~~VlV~G~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a-~~~Ga~~-v~~~  237 (393)
T TIGR02819       161 IRDLTMLSDIFPTGYHGAVT-AGVGPGSTVYIAGAGPVGLAAAASAQLLGAAVVIVGDLNPARLAQA-RSFGCET-VDLS  237 (393)
T ss_pred             ccceeeeccHHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHH-HHcCCeE-EecC
Confidence             3567888889999999875 455999999999899999999999999999654 455667788888 7899975 4442


Q ss_pred             -CH---HHHHHhc--CCccEEEECCCCc--------------hhHHHHHHhcccCCEEEEEcCC-C-cc-ccC------C
Q 019199          234 -DL---EQMKALG--KSLDFIIDTASGD--------------HPFDAYMSLLKVAGVYVLVGFP-S-KV-KFS------P  284 (344)
Q Consensus       234 -~~---~~~~~~~--~~~dvvid~~g~~--------------~~~~~~~~~l~~~G~iv~~g~~-~-~~-~~~------~  284 (344)
                       +.   +.+.+.+  +++|++||++|.+              .+++++++.++++|+++.+|.. . .. .+.      .
T Consensus       238 ~~~~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~~  317 (393)
T TIGR02819       238 KDATLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTEDPGAVDAAAKTGS  317 (393)
T ss_pred             CcccHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcccccccccccccc
Confidence             22   2233333  4799999999986              3699999999999999999975 1 11 111      0


Q ss_pred             ceee-----------eec--h--HhHHHHHHHHHhCCCcc---ce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          285 ASLN-----------IGG--T--KDTQEMLEYCAAHKIYP---QI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       285 ~~~~-----------~~~--~--~~~~~~~~~~~~g~~~~---~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      .++.           .+.  .  +.+.++++++.+|++++   .+ ++|+++|+++||+.+.+++ .+|++|.++
T Consensus       318 ~~i~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~~~-~~Kvvi~~~  391 (393)
T TIGR02819       318 LSIRFGLGWAKSHSFHTGQTPVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDAGA-AKKFVIDPH  391 (393)
T ss_pred             cccchHHhhccCceEEeccCChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhhCC-ceEEEEeCC
Confidence            0111           000  1  23367999999999975   34 6899999999999998875 489999864

Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent.

>cd08230 glucose_DH Glucose dehydrogenase

Probab=100.00  E-value=1.2e-44  Score=335.26  Aligned_cols=306  Identities=24%  Similarity=0.276  Sum_probs=239.4

Q ss_pred             ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      ++++++|.|+|+++||||||.|+|+|++|++.+.|..+   ...+|.++|||++|+|+++|++ ++|++||+|+..+. .
T Consensus        13 l~~~~~p~p~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G~V~~vG~~-~~~~vGdrV~~~~~-~   90 (355)
T cd08230          13 VRVVDIPEPEPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALGVVEEVGDG-SGLSPGDLVVPTVR-R   90 (355)
T ss_pred             CeEEeCCCCCCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccceEEEEecCC-CCCCCCCEEEeccc-c
Confidence            88999999999999999999999999999999988653   1245789999999999999999 99999999987654 4


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc---
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH---  175 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~---  175 (344)
                      .|++|.+|++|+++.|.+..+...+.    ....|+|+||+.++++.++++|++++  +++++..++.+++.++...   
T Consensus        91 ~cg~C~~c~~g~~~~c~~~~~~~~g~----~~~~G~~aey~~~~~~~~~~~P~~~~--~~a~~~~p~~~~~~a~~~~~~~  164 (355)
T cd08230          91 PPGKCLNCRIGRPDFCETGEYTERGI----KGLHGFMREYFVDDPEYLVKVPPSLA--DVGVLLEPLSVVEKAIEQAEAV  164 (355)
T ss_pred             CCCcChhhhCcCcccCCCcceeccCc----CCCCccceeEEEeccccEEECCCCCC--cceeecchHHHHHHHHHHHhhh
Confidence            79999999999999998754321121    02468999999999999999999999  3344444555544443221   


Q ss_pred             ---cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC---CchhHHHHHHhCCCcEEEeCCCHHHH-HHhcCCccEE
Q 019199          176 ---KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST---STSKKEEALSLLGADKFVVSSDLEQM-KALGKSLDFI  248 (344)
Q Consensus       176 ---~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~~~~-~~~~~~~dvv  248 (344)
                         ...++|++|+|+|+|++|++++|+||.+|++|+++++   ++++++.+ +++|++. +++.+.+.. .+..+++|++
T Consensus       165 ~~~~~~~~g~~vlI~G~G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~-~~~Ga~~-v~~~~~~~~~~~~~~~~d~v  242 (355)
T cd08230         165 QKRLPTWNPRRALVLGAGPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIV-EELGATY-VNSSKTPVAEVKLVGEFDLI  242 (355)
T ss_pred             hhhcccCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHH-HHcCCEE-ecCCccchhhhhhcCCCCEE
Confidence               1246899999999999999999999999999999987   56777777 7899987 455443221 1224679999


Q ss_pred             EECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCC----ceee----------eechHhHHHHHHHHHhCC-----
Q 019199          249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSP----ASLN----------IGGTKDTQEMLEYCAAHK-----  306 (344)
Q Consensus       249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~----~~~~----------~~~~~~~~~~~~~~~~g~-----  306 (344)
                      ||++|++..+..+++.++++|+++.+|.. .  ..+++.    ..+.          ....++++++++++.++.     
T Consensus       243 id~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~  322 (355)
T cd08230         243 IEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDGGELNRDLVLGNKALVGSVNANKRHFEQAVEDLAQWKYRWPG  322 (355)
T ss_pred             EECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccChhhhhhhHhhcCcEEEEecCCchhhHHHHHHHHHhccccccc
Confidence            99999877789999999999999999976 3  223331    1111          223467899999998877     


Q ss_pred             -Cccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          307 -IYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       307 -~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                       +++.+ ++|+++|+++||+++.++.  +|++|.+
T Consensus       323 ~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~  355 (355)
T cd08230         323 VLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW  355 (355)
T ss_pred             chHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence             44544 8999999999999887654  5999864

Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai

>cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.3e-43  Score=325.74  Aligned_cols=319  Identities=33%  Similarity=0.603  Sum_probs=269.6

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++...++.+.+++++++.|++.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+.+++|++||+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~   81 (333)
T cd08296           2 KAVQVTEPGGPLELVERDVPLPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVGRIDAVGEGVSRWKVGDR   81 (333)
T ss_pred             eEEEEccCCCCceEEeccCCCCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeEEEEEECCCCccCCCCCE
Confidence            45555545467899999999999999999999999999999988886544456889999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |++.+....|+.|.+|..|+.+.|.+....       +....|++++|+.++...++++|+++++.+++++++.+.|||+
T Consensus        82 V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~-------~~~~~g~~a~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  154 (333)
T cd08296          82 VGVGWHGGHCGTCDACRRGDFVHCENGKVT-------GVTRDGGYAEYMLAPAEALARIPDDLDAAEAAPLLCAGVTTFN  154 (333)
T ss_pred             EEeccccCCCCCChhhhCcCcccCCCCCcc-------CcccCCcceeEEEEchhheEeCCCCCCHHHhhhhhhhhHHHHH
Confidence            988766678999999999999999875421       2223589999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh--cCCccEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--GKSLDFI  248 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~dvv  248 (344)
                      ++... .+++|++|||+|+|.+|++++++|+.+|++|+++++++++++.+ +++|++++++....+....+  .+++|++
T Consensus       155 ~~~~~-~~~~~~~vlV~g~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~d~v  232 (333)
T cd08296         155 ALRNS-GAKPGDLVAVQGIGGLGHLAVQYAAKMGFRTVAISRGSDKADLA-RKLGAHHYIDTSKEDVAEALQELGGAKLI  232 (333)
T ss_pred             HHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCChHHHHHH-HHcCCcEEecCCCccHHHHHHhcCCCCEE
Confidence            99776 66999999999999999999999999999999999999998888 78999999887654332222  1579999


Q ss_pred             EECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCc
Q 019199          249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIE  317 (344)
Q Consensus       249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~  317 (344)
                      +|+.|....+..++++++++|+++.+|.. ...+++...+.          ....++++.+++++.++++++.++.|+++
T Consensus       233 i~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~v~~~~~~  312 (333)
T cd08296         233 LATAPNAKAISALVGGLAPRGKLLILGAAGEPVAVSPLQLIMGRKSIHGWPSGTALDSEDTLKFSALHGVRPMVETFPLE  312 (333)
T ss_pred             EECCCchHHHHHHHHHcccCCEEEEEecCCCCCCcCHHHHhhcccEEEEeCcCCHHHHHHHHHHHHhCCCCceEEEEEHH
Confidence            99998666799999999999999999876 33333322111          23346788999999999998777889999


Q ss_pred             cHHHHHHHHHcCCcceEEEEE
Q 019199          318 NVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       318 ~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++.+||+.+.+++.+||+|++
T Consensus       313 ~~~~a~~~~~~~~~~gk~v~~  333 (333)
T cd08296         313 KANEAYDRMMSGKARFRVVLT  333 (333)
T ss_pred             HHHHHHHHHHCCCCceeEEeC
Confidence            999999999999999999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal

>PRK10309 galactitol-1-phosphate dehydrogenase; Provisional

Probab=100.00  E-value=1.5e-43  Score=327.04  Aligned_cols=316  Identities=22%  Similarity=0.353  Sum_probs=252.8

Q ss_pred             eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++... .++.+++.+.+.|+| .++||+||+.++++|++|+....... ...+|.++|||++|+|+++|+++++|++||+
T Consensus         3 a~~~~-~~~~~~~~~~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~~-~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd~   80 (347)
T PRK10309          3 SVVND-TDGIVRVAESPIPEIKHQDDVLVKVASSGLCGSDIPRIFKNG-AHYYPITLGHEFSGYVEAVGSGVDDLHPGDA   80 (347)
T ss_pred             eEEEe-CCCceEEEECCCCCCCCCCEEEEEEEEEEEchhcHHHHhCCC-CCCCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence            44443 345688899999997 59999999999999999987532211 1235789999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |++.+.. .|+.|.+|..|..+.|.+..+  .     +....|+|++|+.++++.++++|+++++++++.+. .+.++++
T Consensus        81 V~~~~~~-~c~~c~~c~~g~~~~c~~~~~--~-----g~~~~G~~aey~~v~~~~~~~lP~~~s~~~aa~~~-~~~~~~~  151 (347)
T PRK10309         81 VACVPLL-PCFTCPECLRGFYSLCAKYDF--I-----GSRRDGGNAEYIVVKRKNLFALPTDMPIEDGAFIE-PITVGLH  151 (347)
T ss_pred             EEECCCc-CCCCCcchhCcCcccCCCcce--e-----ccCCCCccceeEEeehHHeEECcCCCCHHHhhhhh-HHHHHHH
Confidence            9887765 799999999999999986432  1     22346899999999999999999999999998663 4555777


Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc--CCc
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG--KSL  245 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~--~~~  245 (344)
                      ++.. ..+++|++|+|+|+|++|++++|+|+.+|++ |+++++++++++.+ +++|++++++.++.  +.+.+..  +++
T Consensus       152 ~~~~-~~~~~g~~vlV~G~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~~~~~~  229 (347)
T PRK10309        152 AFHL-AQGCEGKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDINSEKLALA-KSLGAMQTFNSREMSAPQIQSVLRELRF  229 (347)
T ss_pred             HHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCCceEecCcccCHHHHHHHhcCCCC
Confidence            7644 4458999999999999999999999999996 78888889888887 78999998887643  2233332  468


Q ss_pred             c-EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc----------eee--e-e-----chHhHHHHHHHHHhC
Q 019199          246 D-FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA----------SLN--I-G-----GTKDTQEMLEYCAAH  305 (344)
Q Consensus       246 d-vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~----------~~~--~-~-----~~~~~~~~~~~~~~g  305 (344)
                      | ++||++|+...+..++++++++|+++.+|.. ....++..          .+.  + .     ..++++++++++++|
T Consensus       230 d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~g  309 (347)
T PRK10309        230 DQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTER  309 (347)
T ss_pred             CeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCcccChhhhhHHhhcCcEEEEEeccccCCcchhHHHHHHHHHHcC
Confidence            8 9999999887799999999999999999976 32222211          111  1 1     136789999999999


Q ss_pred             CCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          306 KIY--PQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       306 ~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      .+.  +.+ ++|+|+|+++|++.+.+++..||+|+.++
T Consensus       310 ~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  347 (347)
T PRK10309        310 KLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQIP  347 (347)
T ss_pred             CCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeCC
Confidence            985  444 88999999999999999988899999763

>cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=2.4e-43  Score=324.45  Aligned_cols=326  Identities=57%  Similarity=0.950  Sum_probs=278.8

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++|.++...+.+++++++.|+|.++||+||+.++++|++|+..+.|......+|.++|||++|+|+++|+.+++|++||+
T Consensus         1 ~~~~~~~~~~~~~~~~~~~p~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (337)
T cd05283           1 KGYAARDASGKLEPFTFERRPLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVGIVVAVGSKVTKFKVGDR   80 (337)
T ss_pred             CceEEecCCCCceEEeccCCCCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceeeEEEEECCCCcccCCCCE
Confidence            35677777788999999999999999999999999999999988887655566889999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |++.+....|++|.+|.++..+.|++....+.+...++....|+|++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus        81 V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~l~~~~~ta~~  160 (337)
T cd05283          81 VGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKIPEGLDSAAAAPLLCAGITVYS  160 (337)
T ss_pred             EEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEECCCCCCHHHhhhhhhHHHHHHH
Confidence            98666667899999999999999988654444444444445789999999999999999999999999999999999999


Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ++.... +++|++++|.|+|.+|++++++++.+|++|+++++++++.+.+ +++|++.+++.+..+......+++|++||
T Consensus       161 ~~~~~~-~~~g~~vlV~g~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~d~v~~  238 (337)
T cd05283         161 PLKRNG-VGPGKRVGVVGIGGLGHLAVKFAKALGAEVTAFSRSPSKKEDA-LKLGADEFIATKDPEAMKKAAGSLDLIID  238 (337)
T ss_pred             HHHhcC-CCCCCEEEEECCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEecCcchhhhhhccCCceEEEE
Confidence            987776 5999999998889999999999999999999999998888888 68999998887765544445578999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccH
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENV  319 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  319 (344)
                      +++....+..++++++++|+++.+|.. ....++...+.          ....++++.+++++.++++++.++.|+++++
T Consensus       239 ~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~  318 (337)
T cd05283         239 TVSASHDLDPYLSLLKPGGTLVLVGAPEEPLPVPPFPLIFGRKSVAGSLIGGRKETQEMLDFAAEHGIKPWVEVIPMDGI  318 (337)
T ss_pred             CCCCcchHHHHHHHhcCCCEEEEEeccCCCCccCHHHHhcCceEEEEecccCHHHHHHHHHHHHhCCCccceEEEEHHHH
Confidence            999875589999999999999999866 22223222211          2345789999999999999887889999999


Q ss_pred             HHHHHHHHcCCcceEEEEE
Q 019199          320 NEALERLIKRDVKYRFVID  338 (344)
Q Consensus       320 ~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++||+.+.+++..||+|++
T Consensus       319 ~~a~~~~~~~~~~~k~v~~  337 (337)
T cd05283         319 NEALERLEKGDVRYRFVLD  337 (337)
T ss_pred             HHHHHHHHcCCCcceEeeC
Confidence            9999999999989999874

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic

>cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH)

Probab=100.00  E-value=9.6e-43  Score=323.41  Aligned_cols=325  Identities=25%  Similarity=0.349  Sum_probs=263.1

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC------
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR------   84 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~------   84 (344)
                      +++++.+..+.+++++.+.|+|.++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|+++++      
T Consensus         2 ka~~~~~~~~~l~~~~~~~p~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~~~~   81 (361)
T cd08231           2 RAAVLTGPGKPLEIREVPLPDLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVGRVVALGGGVTTDVAGEP   81 (361)
T ss_pred             eEEEEcCCCCCCEEEeccCCCCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCceEEEEeCCCccccccCCc
Confidence            45666554568999999999999999999999999999999988886643467889999999999999999986      


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc-eEEEcCCCCCcccccccch
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER-YCYKIANDYPLALAAPLLC  163 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~P~~~~~~~aa~l~~  163 (344)
                      |++||+|+..+.+ +|+.|.+|+.+.++.|.+..+.-...........|+|++|++++++ .++++|++++..+++.+++
T Consensus        82 ~~~Gd~V~~~~~~-~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~lP~~~~~~~aa~~~~  160 (361)
T cd08231          82 LKVGDRVTWSVGA-PCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRVPDNVPDEVAAPANC  160 (361)
T ss_pred             cCCCCEEEEcccC-CCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEECCCCCCHHHHHHhcC
Confidence            9999999887655 8999999999999999876432111100011235899999999986 7999999999999998889


Q ss_pred             hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH------
Q 019199          164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE------  236 (344)
Q Consensus       164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~------  236 (344)
                      ++.|||+++......++|++|||+|+|++|++++++|+.+|+ +|+++++++++.+.+ +++|++.+++.++..      
T Consensus       161 ~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~  239 (361)
T cd08231         161 ALATVLAALDRAGPVGAGDTVVVQGAGPLGLYAVAAAKLAGARRVIVIDGSPERLELA-REFGADATIDIDELPDPQRRA  239 (361)
T ss_pred             HHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCCeEEcCcccccHHHHH
Confidence            999999999888886799999999999999999999999999 999999888888877 689999888775421      


Q ss_pred             HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCc-------eee---eechHhHHHHHHH
Q 019199          237 QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPA-------SLN---IGGTKDTQEMLEY  301 (344)
Q Consensus       237 ~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~-------~~~---~~~~~~~~~~~~~  301 (344)
                      .+.+..  +++|++||++|+...+..++++++++|+++.+|.. .  ...++..       .+.   ....+++++++++
T Consensus       240 ~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (361)
T cd08231         240 IVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPAGTVPLDPERIVRKNLTIIGVHNYDPSHLYRAVRF  319 (361)
T ss_pred             HHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCCCccccCHHHHhhcccEEEEcccCCchhHHHHHHH
Confidence            233333  57999999999866689999999999999999865 1  2222221       111   2345678999999


Q ss_pred             HHhC--CCc--cc-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          302 CAAH--KIY--PQ-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       302 ~~~g--~~~--~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +.++  .++  +. .++|+++++++||+.+.+++ .+|+||.
T Consensus       320 ~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~-~~k~vi~  360 (361)
T cd08231         320 LERTQDRFPFAELVTHRYPLEDINEALELAESGT-ALKVVID  360 (361)
T ss_pred             HHhccCcCCchhheeeeeeHHHHHHHHHHHHcCC-ceEEEeC
Confidence            9887  433  34 48899999999999998877 4899985

This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino

>cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase

Probab=100.00  E-value=2.1e-43  Score=324.98  Aligned_cols=308  Identities=15%  Similarity=0.172  Sum_probs=232.7

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC----CCCCCCcccccceEEEEecCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      +.+++.+. .++.+++++.+.|+ +++||+|||.++|||++|++.+.|....    ..+|.++|||++|+|+++|..  +
T Consensus         2 ~~~~~~~~-~~~~~~~~~~~~P~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G~V~~~g~~--~   77 (341)
T cd08237           2 INQVYRLV-RPKFFEVTYEEENL-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIGVVVSDPTG--T   77 (341)
T ss_pred             cccceEEe-ccceEEEeecCCCC-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEEEEEeeCCC--c
Confidence            34556655 56689999999995 9999999999999999999999886531    357999999999999998864  7


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++||+|++.+.. .|+ |..|  +..+.|.+..+.       |....|+|+||+++|++.++++|+++++++|+ +..+
T Consensus        78 ~~vGdrV~~~~~~-~~~-~~~~--~~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~vP~~l~~~~aa-~~~~  145 (341)
T cd08237          78 YKVGTKVVMVPNT-PVE-KDEI--IPENYLPSSRFR-------SSGYDGFMQDYVFLPPDRLVKLPDNVDPEVAA-FTEL  145 (341)
T ss_pred             cCCCCEEEECCCC-Cch-hccc--chhccCCCccee-------EecCCCceEEEEEEchHHeEECCCCCChHHhh-hhch
Confidence            9999999887655 476 4455  345678654321       11235899999999999999999999998876 4457


Q ss_pred             hhHhHHHHHhcc--CCCCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199          165 GITVYTPMMRHK--MNQPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA  240 (344)
Q Consensus       165 ~~ta~~~l~~~~--~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~  240 (344)
                      +.++++++....  .+++|++|||+|+|++|++++|+++. +|+ +|++++++++|++.+ ++++++..++    +..+ 
T Consensus       146 ~~~a~~a~~~~~~~~~~~g~~VlV~G~G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a-~~~~~~~~~~----~~~~-  219 (341)
T cd08237         146 VSVGVHAISRFEQIAHKDRNVIGVWGDGNLGYITALLLKQIYPESKLVVFGKHQEKLDLF-SFADETYLID----DIPE-  219 (341)
T ss_pred             HHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHH-hhcCceeehh----hhhh-
Confidence            888898886532  34889999999999999999999986 554 899999999998888 4566654321    1111 


Q ss_pred             hcCCccEEEECCCC---chhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhC-
Q 019199          241 LGKSLDFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAH-  305 (344)
Q Consensus       241 ~~~~~dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g-  305 (344)
                       ..++|++||++|+   +.++..+++.++++|+++.+|.. ....++...+.          ....++++++++++.++ 
T Consensus       220 -~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08237         220 -DLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEYPVPINTRMVLEKGLTLVGSSRSTREDFERAVELLSRNP  298 (341)
T ss_pred             -ccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCCCcccCHHHHhhCceEEEEecccCHHHHHHHHHHHHhCC
Confidence             1369999999994   45689999999999999999975 32233322111          22346799999999998 


Q ss_pred             ----CCccce-EEEeCcc---HHHHHHHHHcCCcceEEEEEeC
Q 019199          306 ----KIYPQI-ETIPIEN---VNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       306 ----~~~~~~-~~~~~~~---~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                          .+++.+ ++|++++   +.++++.+.++ ..||+||+++
T Consensus       299 ~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~  340 (341)
T cd08237         299 EVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE  340 (341)
T ss_pred             cccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence                455555 7899864   55555555444 5799999864

NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (

>cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase

Probab=100.00  E-value=5.7e-42  Score=317.03  Aligned_cols=315  Identities=26%  Similarity=0.407  Sum_probs=255.4

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-C----------CCCCCCCcccccceEEEEecC
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-G----------DSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~----------~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      ++.+. .++.+++++++.|+|+++||+||+.++++|++|+..+.+.. .          ...+|.++|||++|+|+++|+
T Consensus         3 a~~~~-~~~~l~~~~~~~p~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~   81 (351)
T cd08233           3 AARYH-GRKDIRVEEVPEPPVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGHEFSGVVVEVGS   81 (351)
T ss_pred             eEEEe-cCCceEEEeccCCCCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecccceEEEEEeCC
Confidence            44444 35678899999999999999999999999999987654321 1          113688999999999999999


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP  160 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~  160 (344)
                      ++++|++||+|+..+.. .|++|.+|.+|.+..|....+  .+..    ...|+|++|+.++...++++|++++..+++.
T Consensus        82 ~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~~~----~~~g~~a~~~~~~~~~~~~lP~~~~~~~aa~  154 (351)
T cd08233          82 GVTGFKVGDRVVVEPTI-KCGTCGACKRGLYNLCDSLGF--IGLG----GGGGGFAEYVVVPAYHVHKLPDNVPLEEAAL  154 (351)
T ss_pred             CCCCCCCCCEEEECCCC-CCCCChHHhCcCcccCCCCce--eccC----CCCCceeeEEEechHHeEECcCCCCHHHhhh
Confidence            99999999999876554 799999999999999986532  1110    1258999999999999999999999998876


Q ss_pred             cchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH-
Q 019199          161 LLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM-  238 (344)
Q Consensus       161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-  238 (344)
                      + ..+.|||+++ ....+++|++|+|+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++.++++++.+.. 
T Consensus       155 ~-~~~~ta~~~l-~~~~~~~g~~vlI~g~g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~-~~~ga~~~i~~~~~~~~~  231 (351)
T cd08233         155 V-EPLAVAWHAV-RRSGFKPGDTALVLGAGPIGLLTILALKAAGASKIIVSEPSEARRELA-EELGATIVLDPTEVDVVA  231 (351)
T ss_pred             c-cHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCccCHHH
Confidence            5 5778999998 45566999999999999999999999999999 899999888888888 67999999987765433 


Q ss_pred             --HHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHH
Q 019199          239 --KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCA  303 (344)
Q Consensus       239 --~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~  303 (344)
                        .+..  +++|++||++|....+..++++++++|+++.+|.. ....++...+.          ....++++++++++.
T Consensus       232 ~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  311 (351)
T cd08233         232 EVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEKPISFNPNDLVLKEKTLTGSICYTREDFEEVIDLLA  311 (351)
T ss_pred             HHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCCCCccCHHHHHhhCcEEEEEeccCcchHHHHHHHHH
Confidence              2332  46999999999776699999999999999999876 22232221111          123478999999999


Q ss_pred             hCCCcc--ce-EEEeCccH-HHHHHHHHcCCcc-eEEEE
Q 019199          304 AHKIYP--QI-ETIPIENV-NEALERLIKRDVK-YRFVI  337 (344)
Q Consensus       304 ~g~~~~--~~-~~~~~~~~-~~a~~~~~~~~~~-gkvvi  337 (344)
                      ++.+++  .+ ++|+++|+ ++|++.+.+++.. ||+||
T Consensus       312 ~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~  350 (351)
T cd08233         312 SGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV  350 (351)
T ss_pred             cCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence            999964  34 79999996 7999999999875 99987

(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit.

>cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases

Probab=100.00  E-value=5.7e-41  Score=310.36  Aligned_cols=320  Identities=20%  Similarity=0.247  Sum_probs=259.2

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      ++.+.+ ++.+++.+.+.|.+.++||+||+.++++|++|++...+......+|.++|||++|+|+++|+.+++|++||+|
T Consensus         3 a~~~~~-~~~~~l~~~~~p~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V   81 (351)
T cd08285           3 AFAMLG-IGKVGWIEKPIPVCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVGVVEEVGSEVKDFKPGDRV   81 (351)
T ss_pred             eEEEcc-CCccEEEECCCCCCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEEEEEEecCCcCccCCCCEE
Confidence            444443 4457888899999999999999999999999998877765444568899999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHhH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +..+.. .|+.|..|..|+++.|.+....   +.. +....|+|++|+.++.+  .++++|+++++.+++.++..+.||+
T Consensus        82 ~~~~~~-~~~~c~~c~~g~~~~~~~~~~~---~~~-~~~~~g~~~~y~~v~~~~~~~~~lP~~~~~~~aa~~~~~~~ta~  156 (351)
T cd08285          82 IVPAIT-PDWRSVAAQRGYPSQSGGMLGG---WKF-SNFKDGVFAEYFHVNDADANLAPLPDGLTDEQAVMLPDMMSTGF  156 (351)
T ss_pred             EEcCcC-CCCCCHHHHCcCcccCcCCCCC---ccc-cCCCCcceeEEEEcchhhCceEECCCCCCHHHhhhhccchhhHH
Confidence            887654 7999999999999999874211   111 11246899999999974  8999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--C
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--K  243 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~  243 (344)
                      +++.. ..+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++.+.+ +++|++++++..+.+.   +.+..  +
T Consensus       157 ~~~~~-~~~~~g~~vlI~g~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~~~~~  234 (351)
T cd08285         157 HGAEL-ANIKLGDTVAVFGIGPVGLMAVAGARLRGAGRIIAVGSRPNRVELA-KEYGATDIVDYKNGDVVEQILKLTGGK  234 (351)
T ss_pred             HHHHc-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCceEecCCCCCHHHHHHHHhCCC
Confidence            99754 456999999999889999999999999999 588888888888777 6899999988765432   22222  5


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCC--c-------eee--e--echHhHHHHHHHHHhCCC
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSP--A-------SLN--I--GGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~--~-------~~~--~--~~~~~~~~~~~~~~~g~~  307 (344)
                      ++|+++|++|+...+..++++++++|+++.+|...   ...++.  +       .+.  .  ...+.++++++++++|++
T Consensus       235 ~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~g~i  314 (351)
T cd08285         235 GVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDDYLPIPREEWGVGMGHKTINGGLCPGGRLRMERLASLIEYGRV  314 (351)
T ss_pred             CCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCceeecChhhhhhhccccEEEEeecCCccccHHHHHHHHHcCCC
Confidence            79999999998766899999999999999998662   122221  1       111  1  234678999999999999


Q ss_pred             cc---ce-EEEeCccHHHHHHHHHcCCc-ceEEEEEe
Q 019199          308 YP---QI-ETIPIENVNEALERLIKRDV-KYRFVIDI  339 (344)
Q Consensus       308 ~~---~~-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~  339 (344)
                      ++   .+ +.|+++++++|++.+.+++. ..|++|.+
T Consensus       315 ~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~  351 (351)
T cd08285         315 DPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF  351 (351)
T ss_pred             ChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence            87   34 46899999999999999874 68999864

This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase

Probab=100.00  E-value=2.2e-41  Score=307.27  Aligned_cols=288  Identities=19%  Similarity=0.185  Sum_probs=224.0

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecc-cchhhhhcCCCCC---CCCCCCcccccceEEEEecCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVC-YADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~-~~D~~~~~g~~~~---~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      ++++.+. +++.+++++.+.|+|+++||+||+.++|+| ++|++.+.|..+.   ..+|.++|||++|+|+++|+++ +|
T Consensus         2 ~ka~~~~-~~~~l~~~e~~~p~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G~V~~vG~~v-~~   79 (308)
T TIGR01202         2 TQAIVLS-GPNQIELREVTLTPPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVGRVVEAGPDT-GF   79 (308)
T ss_pred             ceEEEEe-CCCeEEEEEecCCCCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEEEEEEecCCC-CC
Confidence            4556654 466789999999999999999999999996 7999888886542   3579999999999999999998 69


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||+|++.     |..|..|..                     ...|+|+||+.++++.++++|+++++.. +.+ ...
T Consensus        80 ~vGdrV~~~-----~~~c~~~~~---------------------~~~G~~aey~~v~~~~~~~ip~~~~~~~-a~~-~~~  131 (308)
T TIGR01202        80 RPGDRVFVP-----GSNCYEDVR---------------------GLFGGASKRLVTPASRVCRLDPALGPQG-ALL-ALA  131 (308)
T ss_pred             CCCCEEEEe-----Ccccccccc---------------------ccCCcccceEEcCHHHceeCCCCCCHHH-Hhh-hHH
Confidence            999999762     223322211                     1248999999999999999999999854 444 457


Q ss_pred             hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCC
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKS  244 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~  244 (344)
                      .|||+++.+. . .++++|+|+|+|++|++++|+|+.+|++ |++++..+++++.+ +.   ..++++.+.     ...+
T Consensus       132 ~~a~~~~~~~-~-~~~~~vlV~G~G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a-~~---~~~i~~~~~-----~~~g  200 (308)
T TIGR01202       132 ATARHAVAGA-E-VKVLPDLIVGHGTLGRLLARLTKAAGGSPPAVWETNPRRRDGA-TG---YEVLDPEKD-----PRRD  200 (308)
T ss_pred             HHHHHHHHhc-c-cCCCcEEEECCCHHHHHHHHHHHHcCCceEEEeCCCHHHHHhh-hh---ccccChhhc-----cCCC
Confidence            8999998764 3 4688999999999999999999999996 55666666666555 23   334544321     2357


Q ss_pred             ccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCcc--c-
Q 019199          245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYP--Q-  310 (344)
Q Consensus       245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~--~-  310 (344)
                      +|++||++|+..+++.++++++++|+++.+|.. ....++.....          ....++++++++++.+|++++  . 
T Consensus       201 ~Dvvid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~g~i~~~~~i  280 (308)
T TIGR01202       201 YRAIYDASGDPSLIDTLVRRLAKGGEIVLAGFYTEPVNFDFVPAFMKEARLRIAAEWQPGDLHAVRELIESGALSLDGLI  280 (308)
T ss_pred             CCEEEECCCCHHHHHHHHHhhhcCcEEEEEeecCCCcccccchhhhcceEEEEecccchhHHHHHHHHHHcCCCChhhcc
Confidence            999999999987789999999999999999976 32233222111          123467999999999999975  3 


Q ss_pred             eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          311 IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .++|+++|+++|++.+.+++..+|++|+
T Consensus       281 t~~~~l~~~~~A~~~~~~~~~~~Kv~~~  308 (308)
T TIGR01202       281 THQRPASDAAEAYMTAFSDPDCLKMILD  308 (308)
T ss_pred             ceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence            4899999999999998887767999874

>cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases

Probab=100.00  E-value=1.6e-40  Score=309.41  Aligned_cols=327  Identities=25%  Similarity=0.388  Sum_probs=259.5

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++++++...+++.++++++|.|++.++||+||+.++|+|++|++.+.|... ..+|.++|||++|+|+++|++++.+++|
T Consensus         7 ~~~a~~~~~~~~~~~l~~~p~p~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~G   85 (373)
T cd08299           7 KCKAAVLWEPKKPFSIEEIEVAPPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAGIVESVGEGVTTVKPG   85 (373)
T ss_pred             eeEEEEEecCCCCcEEEEeecCCCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceEEEEEeCCCCccCCCC
Confidence            355666666677789999999999999999999999999999998887653 3568899999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCcccccc-cccc--------CCC-----CccCCcceeEEEEecceEEEcCCCCC
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAID--------ADG-----TITKGGYSSYIVVHERYCYKIANDYP  154 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~~--------~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~  154 (344)
                      |+|++.+ ..+|++|.+|+.++++.|++....- .++.        ..|     ....|+|+||+.++++.++++|++++
T Consensus        86 d~V~~~~-~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~~~~~~lP~~l~  164 (373)
T cd08299          86 DKVIPLF-VPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDEIAVAKIDAAAP  164 (373)
T ss_pred             CEEEECC-CCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecccceeeCCCCCC
Confidence            9998765 4589999999999999998753210 0000        001     01258999999999999999999999


Q ss_pred             cccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       155 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                      +.+++.+++++.|||+++.....+++|++|+|+|+|++|++++++|+.+|+ +|+++++++++++.+ +++|++++++..
T Consensus       165 ~~~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~a-~~lGa~~~i~~~  243 (373)
T cd08299         165 LEKVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSAIMGCKAAGASRIIAVDINKDKFAKA-KELGATECINPQ  243 (373)
T ss_pred             hHHhheeccchHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEeccc
Confidence            999999999999999988777777999999999889999999999999999 899999999999888 789999988865


Q ss_pred             CH-----HHHHHh-cCCccEEEECCCCchhHHHHHHhc-ccCCEEEEEcCC-C--ccccCCc------eee---e---ec
Q 019199          234 DL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLL-KVAGVYVLVGFP-S--KVKFSPA------SLN---I---GG  291 (344)
Q Consensus       234 ~~-----~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l-~~~G~iv~~g~~-~--~~~~~~~------~~~---~---~~  291 (344)
                      +.     ..+.+. .+++|+++|++|++..+..++..+ +++|+++.+|.. .  ...+...      .+.   .   ..
T Consensus       244 ~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~  323 (373)
T cd08299         244 DYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSSQNLSINPMLLLTGRTWKGAVFGGWKS  323 (373)
T ss_pred             ccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCCceeecCHHHHhcCCeEEEEEecCCcc
Confidence            42     122222 357999999999876678877765 579999999965 2  1222221      111   1   12


Q ss_pred             hHhHHHHHHHHHhCCCc--cc-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          292 TKDTQEMLEYCAAHKIY--PQ-IETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~~~--~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      .+.+.++++.+.++.++  +. .++|+++++.+|++.+.+++. .|+++.+
T Consensus       324 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~  373 (373)
T cd08299         324 KDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF  373 (373)
T ss_pred             HHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence            25677788888777654  33 489999999999999887664 5887753

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically

>PRK10083 putative oxidoreductase; Provisional

Probab=100.00  E-value=2.4e-40  Score=304.72  Aligned_cols=318  Identities=21%  Similarity=0.299  Sum_probs=254.8

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      ++... +++.+++++++.|+|.++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+.++.+++||+|
T Consensus         3 a~~~~-~~~~~~~~~~~~p~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~Gd~V   81 (339)
T PRK10083          3 SIVIE-KPNSLAIEERPIPQPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVDAARIGERV   81 (339)
T ss_pred             EEEEe-cCCeeEEEeccCCCCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEEEEEEECCCCccCCCCCEE
Confidence            44443 45678899999999999999999999999999999888766544678999999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      ++.+.. .|+.|.+|.+++++.|.....  .     +....|+|++|+.++...++++|+++++.+++ +...+.+++.+
T Consensus        82 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~a~-~~~~~~~a~~~  152 (339)
T PRK10083         82 AVDPVI-SCGHCYPCSIGKPNVCTSLVV--L-----GVHRDGGFSEYAVVPAKNAHRIPDAIADQYAV-MVEPFTIAANV  152 (339)
T ss_pred             EEcccc-CCCCCccccCcCcccCCCCce--E-----EEccCCcceeeEEechHHeEECcCCCCHHHHh-hhchHHHHHHH
Confidence            887665 699999999999999976432  1     11235899999999999999999999998876 55677788854


Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHH-CCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~d  246 (344)
                      . ....+++|++|+|+|+|++|++++|+|+. +|++ ++++++++++.+.+ +++|++++++.++......+   ..++|
T Consensus       153 ~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~-~~~Ga~~~i~~~~~~~~~~~~~~g~~~d  230 (339)
T PRK10083        153 T-GRTGPTEQDVALIYGAGPVGLTIVQVLKGVYNVKAVIVADRIDERLALA-KESGADWVINNAQEPLGEALEEKGIKPT  230 (339)
T ss_pred             H-HhcCCCCCCEEEEECCCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHhcCCCCCC
Confidence            4 45566999999999999999999999996 6995 67777778888777 68999999987654333332   23467


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc-------eee--eechHhHHHHHHHHHhCCCcc---ceEE
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-------SLN--IGGTKDTQEMLEYCAAHKIYP---QIET  313 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-------~~~--~~~~~~~~~~~~~~~~g~~~~---~~~~  313 (344)
                      ++||++|+...+..++++++++|+++.+|.. ....+...       .+.  ....+.++++++++.++.+++   ..++
T Consensus       231 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~l~~~~~~~~~  310 (339)
T PRK10083        231 LIIDAACHPSILEEAVTLASPAARIVLMGFSSEPSEIVQQGITGKELSIFSSRLNANKFPVVIDWLSKGLIDPEKLITHT  310 (339)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCceecHHHHhhcceEEEEEecChhhHHHHHHHHHcCCCChHHheeee
Confidence            9999999776799999999999999999865 21111111       000  123467899999999999986   3489


Q ss_pred             EeCccHHHHHHHHHcCC-cceEEEEEeCC
Q 019199          314 IPIENVNEALERLIKRD-VKYRFVIDIQN  341 (344)
Q Consensus       314 ~~~~~~~~a~~~~~~~~-~~gkvvi~~~~  341 (344)
                      |+++++++|++.+.+++ ..+|+++++.+
T Consensus       311 ~~l~~~~~a~~~~~~~~~~~~kvvv~~~~  339 (339)
T PRK10083        311 FDFQHVADAIELFEKDQRHCCKVLLTFAE  339 (339)
T ss_pred             ecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence            99999999999998654 46999998763

>cd05284 arabinose_DH_like D-arabinose dehydrogenase

Probab=100.00  E-value=2.8e-40  Score=304.38  Aligned_cols=319  Identities=30%  Similarity=0.466  Sum_probs=265.7

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      +++++..+.+.+.+.+.+.|++.+++|+||+.++++|++|+....|...   ...+|.++|||++|+|+++|+++++|++
T Consensus         2 ka~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~   81 (340)
T cd05284           2 KAARLYEYGKPLRLEDVPVPEPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAGWVEEVGSGVDGLKE   81 (340)
T ss_pred             eeeEeccCCCCceEEeCCCCCCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeEEEEEeCCCCCcCcC
Confidence            3455443335688888999999999999999999999999988877653   3456789999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+..+.. .|+.|..|..|..+.|++..+.  ++     ...|+|++|+.++++.++++|+++++.+++++++.+.|
T Consensus        82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~-----~~~g~~~~~~~v~~~~~~~~P~~ls~~~aa~l~~~~~t  153 (340)
T cd05284          82 GDPVVVHPPW-GCGTCRYCRRGEENYCENARFP--GI-----GTDGGFAEYLLVPSRRLVKLPRGLDPVEAAPLADAGLT  153 (340)
T ss_pred             CCEEEEcCCC-CCCCChHHhCcCcccCCCCccc--Cc-----cCCCcceeeEEecHHHeEECCCCCCHHHhhhhcchHHH
Confidence            9999887664 7999999999999999987542  21     34589999999999999999999999999999999999


Q ss_pred             hHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc-
Q 019199          168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-  242 (344)
Q Consensus       168 a~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~-  242 (344)
                      ||+++... ..+.++++|||+|+|++|++++++|+.+| .+|+++++++++.+.+ +++|++++++.+..  +.+.+.. 
T Consensus       154 a~~~l~~~~~~~~~~~~vlI~g~~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~  232 (340)
T cd05284         154 AYHAVKKALPYLDPGSTVVVIGVGGLGHIAVQILRALTPATVIAVDRSEEALKLA-ERLGADHVLNASDDVVEEVRELTG  232 (340)
T ss_pred             HHHHHHHhcccCCCCCEEEEEcCcHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHH-HHhCCcEEEcCCccHHHHHHHHhC
Confidence            99999776 45688999999999889999999999999 7999999988888888 78999998887764  2223332 


Q ss_pred             -CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCce-------ee---eechHhHHHHHHHHHhCCCccce
Q 019199          243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPAS-------LN---IGGTKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       243 -~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~-------~~---~~~~~~~~~~~~~~~~g~~~~~~  311 (344)
                       +++|+++|++|+......++++++++|+++.+|......++...       +.   ....+.++++++++.++.+++.+
T Consensus       233 ~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~  312 (340)
T cd05284         233 GRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHGRLPTSDLVPTEISVIGSLWGTRAELVEVVALAESGKVKVEI  312 (340)
T ss_pred             CCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCCccCHHHhhhcceEEEEEecccHHHHHHHHHHHHhCCCCcce
Confidence             47999999999766699999999999999999865222222111       11   22456788999999999998777


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +.|+++++++|++.+.+++..||+++.
T Consensus       313 ~~~~~~~~~~a~~~~~~~~~~gkvv~~  339 (340)
T cd05284         313 TKFPLEDANEALDRLREGRVTGRAVLV  339 (340)
T ss_pred             EEEeHHHHHHHHHHHHcCCccceEEec
Confidence            889999999999999999888999975

This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d

>cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase

Probab=100.00  E-value=5.8e-40  Score=304.97  Aligned_cols=326  Identities=27%  Similarity=0.419  Sum_probs=261.9

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      |+++++++.+.++.+++++.+.|.+.++||+||+.++++|++|+....|..+ ..+|.++|||++|+|+++|+++..|++
T Consensus         1 ~~~~a~~~~~~~~~~~~~~~~~p~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~~   79 (365)
T cd08278           1 MKTTAAVVREPGGPFVLEDVELDDPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAGVVEAVGSAVTGLKP   79 (365)
T ss_pred             CccEEeeeccCCCcceEEEeecCCCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCC
Confidence            4556666665456788899999999999999999999999999999887664 346789999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccc-cccccCCC---------------CccCCcceeEEEEecceEEEcCC
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADG---------------TITKGGYSSYIVVHERYCYKIAN  151 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~~~P~  151 (344)
                      ||+|++.+.  .|+.|.+|+.+..++|...... +.+...+|               ....|+|++|+.++++.++++|+
T Consensus        80 Gd~V~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~iP~  157 (365)
T cd08278          80 GDHVVLSFA--SCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVHERNVVKVDK  157 (365)
T ss_pred             CCEEEEccc--CCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEecchhEEECCC
Confidence            999987553  7999999999999999865321 11111000               11258999999999999999999


Q ss_pred             CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEE
Q 019199          152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFV  230 (344)
Q Consensus       152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v  230 (344)
                      ++++.+++++++++.||+.++.....+++|++|||+|+|++|++++++|+.+|+ +|+++++++++.+.+ +++|++.++
T Consensus       158 ~~s~~~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~g~vG~~~~~la~~~G~~~v~~~~~~~~k~~~~-~~~g~~~~i  236 (365)
T cd08278         158 DVPLELLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGAGAVGLAAVMAAKIAGCTTIIAVDIVDSRLELA-KELGATHVI  236 (365)
T ss_pred             CCCHHHhhhhcchhhhhhHHHhhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHcCCcEEe
Confidence            999999999999999999998777777999999999889999999999999999 688888888888777 689999988


Q ss_pred             eCCCHHH---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCcee-------e--e----e
Q 019199          231 VSSDLEQ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASL-------N--I----G  290 (344)
Q Consensus       231 ~~~~~~~---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~-------~--~----~  290 (344)
                      +.++.+.   +.+. .+++|+++|++|+...+..++++++++|+++.+|..   ....++...+       .  .    .
T Consensus       237 ~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (365)
T cd08278         237 NPKEEDLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPGAEVTLDVNDLLVSGKTIRGVIEGDSV  316 (365)
T ss_pred             cCCCcCHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCCCccccCHHHHhhcCceEEEeecCCcC
Confidence            8765322   2222 467999999999876799999999999999999854   1222222211       0  0    1


Q ss_pred             chHhHHHHHHHHHhCCCcc--ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          291 GTKDTQEMLEYCAAHKIYP--QIETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       291 ~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ..+.++++++++.++.+.+  .+..|++++++++++.+.+++. -|++|+
T Consensus       317 ~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  365 (365)
T cd08278         317 PQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKV-IKPVLR  365 (365)
T ss_pred             hHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCc-eEEEEC
Confidence            1346788999999999864  3578999999999999988764 488763

Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu

>PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional

Probab=100.00  E-value=8.9e-40  Score=300.82  Aligned_cols=319  Identities=27%  Similarity=0.490  Sum_probs=260.1

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      +++..+......+++++.|.+.++||+||+.++++|++|+....|..+. ..|.++|||++|+|+++|++++.|++||+|
T Consensus         3 a~~~~~~~~~~~~~~~~~p~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V   81 (338)
T PRK09422          3 AAVVNKDHTGDVVVEKTLRPLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIGIVKEVGPGVTSLKVGDRV   81 (338)
T ss_pred             EEEecCCCCCceEEEecCCCCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccceEEEEECCCCccCCCCCEE
Confidence            4444433333338899999999999999999999999999888776542 336789999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      +..+....|++|.+|..+..+.|.+...       .|....|+|++|+.++.+.++++|+++++.+++.++..+.|||++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~aa~l~~~~~ta~~~  154 (338)
T PRK09422         82 SIAWFFEGCGHCEYCTTGRETLCRSVKN-------AGYTVDGGMAEQCIVTADYAVKVPEGLDPAQASSITCAGVTTYKA  154 (338)
T ss_pred             EEccCCCCCCCChhhcCCCcccCCCccc-------cCccccCcceeEEEEchHHeEeCCCCCCHHHeehhhcchhHHHHH
Confidence            9888888999999999999999986532       122346899999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-H---HHHHHhcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-L---EQMKALGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~~~~~~~~~~d  246 (344)
                      + ....+++|++|||+|+|++|++++++|+. .|++|+++++++++.+.+ +++|++.+++.+. .   +.+.+..+++|
T Consensus       155 ~-~~~~~~~g~~vlV~g~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~v~~~~~~~d  232 (338)
T PRK09422        155 I-KVSGIKPGQWIAIYGAGGLGNLALQYAKNVFNAKVIAVDINDDKLALA-KEVGADLTINSKRVEDVAKIIQEKTGGAH  232 (338)
T ss_pred             H-HhcCCCCCCEEEEECCcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHH-HHcCCcEEecccccccHHHHHHHhcCCCc
Confidence            8 44556999999999999999999999998 599999999999999988 7899998888753 2   23333445789


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc-------eee---eechHhHHHHHHHHHhCCCccceEEEe
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYPQIETIP  315 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~  315 (344)
                      +++++.++...+..++++++++|+++.+|.. ....++..       .+.   ....+.++++++++.++.+.+.+..++
T Consensus       233 ~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~v~~~~  312 (338)
T PRK09422        233 AAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPESMDLSIPRLVLDGIEVVGSLVGTRQDLEEAFQFGAEGKVVPKVQLRP  312 (338)
T ss_pred             EEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCCceecHHHHhhcCcEEEEecCCCHHHHHHHHHHHHhCCCCccEEEEc
Confidence            5555555555699999999999999999865 22222211       111   113577899999999999977677799


Q ss_pred             CccHHHHHHHHHcCCcceEEEEEeC
Q 019199          316 IENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       316 ~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      +++++++++.+.+++..||+++.++
T Consensus       313 ~~~~~~a~~~~~~~~~~gkvvv~~~  337 (338)
T PRK09422        313 LEDINDIFDEMEQGKIQGRMVIDFT  337 (338)
T ss_pred             HHHHHHHHHHHHcCCccceEEEecC
Confidence            9999999999999998899998754

>cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase

Probab=100.00  E-value=2.8e-40  Score=311.27  Aligned_cols=312  Identities=19%  Similarity=0.292  Sum_probs=239.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhh-cCCCC------CCCCCCCcccccceEEEEecC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWT-RNKHG------DSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~------~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      |+++++..++ ++.+++++++.|+|.++||+|||.++|+|++|++.+ .|...      ...+|.++|||++|+|+++|+
T Consensus         1 m~~~a~~~~~-~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~   79 (410)
T cd08238           1 MKTKAWRMYG-KGDLRLEKFELPEIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEFAGTILKVGK   79 (410)
T ss_pred             CCcEEEEEEc-CCceEEEecCCCCCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceeccccEEEEEEeCC
Confidence            5677888774 457899999999999999999999999999999865 44321      124688999999999999999


Q ss_pred             CCC-CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc----eEEEcCCCCCc
Q 019199           81 NVS-RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER----YCYKIANDYPL  155 (344)
Q Consensus        81 ~~~-~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~P~~~~~  155 (344)
                      +++ .|++||+|++.+.. .|++|.+|. +       +          |....|+|+||+.++++    .++++|+++++
T Consensus        80 ~v~~~~~vGdrV~~~~~~-~c~~~~~c~-~-------~----------g~~~~G~~aey~~v~~~~~~~~~~~lP~~l~~  140 (410)
T cd08238          80 KWQGKYKPGQRFVIQPAL-ILPDGPSCP-G-------Y----------SYTYPGGLATYHIIPNEVMEQDCLLIYEGDGY  140 (410)
T ss_pred             CccCCCCCCCEEEEcCCc-CCCCCCCCC-C-------c----------cccCCCcceEEEEecHHhccCCeEECCCCCCH
Confidence            998 69999999887654 688887762 1       1          11245899999999987    68999999999


Q ss_pred             cccccc---chhhhHhHHHHH--------hccCCCCCCEEEEECC-ChHHHHHHHHHHHCCC---eEEEEeCCchhHHHH
Q 019199          156 ALAAPL---LCAGITVYTPMM--------RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL---NVTVLSTSTSKKEEA  220 (344)
Q Consensus       156 ~~aa~l---~~~~~ta~~~l~--------~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~---~V~~~~~~~~~~~~~  220 (344)
                      .+++.+   ++. .+++.++.        +...+++|++|+|+|+ |++|++++|+|+.+|+   +|++++.+++|++.+
T Consensus       141 ~~aal~epl~~~-~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a  219 (410)
T cd08238         141 AEASLVEPLSCV-IGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARA  219 (410)
T ss_pred             HHHhhcchHHHH-HHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHH
Confidence            988743   232 22343322        3345689999999985 9999999999999754   799999999999988


Q ss_pred             HHhC--------CCc-EEEeCCC-HH---HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--C--ccc
Q 019199          221 LSLL--------GAD-KFVVSSD-LE---QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--S--KVK  281 (344)
Q Consensus       221 ~~~~--------g~~-~~v~~~~-~~---~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~--~~~  281 (344)
                       +++        |++ .+++..+ .+   .+.+.+  +++|++||++|+..++..++++++++|+++.++..  .  ..+
T Consensus       220 -~~~~~~~~~~~Ga~~~~i~~~~~~~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~~~~~  298 (410)
T cd08238         220 -QRLFPPEAASRGIELLYVNPATIDDLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKNFSAP  298 (410)
T ss_pred             -HHhccccccccCceEEEECCCccccHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCCcccc
Confidence             465        665 4666543 22   233333  47999999999877899999999999988876432  1  123


Q ss_pred             cCCceee----------eechHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          282 FSPASLN----------IGGTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       282 ~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      ++...+.          ....++++++++++++|++++  .+ ++|+++|+++|++.+. ++..||+|+..+..
T Consensus       299 ~~~~~~~~~~~~i~g~~~~~~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~~~  371 (410)
T cd08238         299 LNFYNVHYNNTHYVGTSGGNTDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQKP  371 (410)
T ss_pred             ccHHHhhhcCcEEEEeCCCCHHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECCCC
Confidence            3322221          123468999999999999987  34 8999999999999998 77789999988644

L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found

>cd05278 FDH_like Formaldehyde dehydrogenases

Probab=100.00  E-value=6.1e-39  Score=296.27  Aligned_cols=319  Identities=23%  Similarity=0.355  Sum_probs=258.9

Q ss_pred             eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++... .++.+.+.+++.|.| .+++|+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|+++++|++||+
T Consensus         3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   81 (347)
T cd05278           3 ALVYL-GPGKIGLEEVPDPKIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVGEVVEVGSDVKRLKPGDR   81 (347)
T ss_pred             eEEEe-cCCceEEEEcCCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEEEEEEECCCccccCCCCE
Confidence            44443 345688889999999 9999999999999999999988887765667899999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+..+.+ .|+.|.+|.+|+.+.|+...+...    .+....|+|++|++++++  .++++|++++..+++.+++.+.||
T Consensus        82 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~g~~~~~~~v~~~~~~~~~lP~~~~~~~aa~l~~~~~ta  156 (347)
T cd05278          82 VSVPCIT-FCGRCRFCRRGYHAHCENGLWGWK----LGNRIDGGQAEYVRVPYADMNLAKIPDGLPDEDALMLSDILPTG  156 (347)
T ss_pred             EEecCCC-CCCCChhHhCcCcccCcCCCcccc----cccCCCCeeeEEEEecchhCeEEECCCCCCHHHHhhhcchhhhe
Confidence            9887554 899999999999999987432211    122345899999999987  899999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--  242 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--  242 (344)
                      |+++ ....+++|++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++.+++.++.+..   .+..  
T Consensus       157 ~~~~-~~~~~~~~~~VlI~g~g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~i~~~~~~  234 (347)
T cd05278         157 FHGA-ELAGIKPGSTVAVIGAGPVGLCAVAGARLLGAARIIAVDSNPERLDLA-KEAGATDIINPKNGDIVEQILELTGG  234 (347)
T ss_pred             eehh-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHH-HHhCCcEEEcCCcchHHHHHHHHcCC
Confidence            9998 45667999999998889999999999999997 888887777777766 68899999887765432   2222  


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc---cC--Cc--eee-----eechHhHHHHHHHHHhCCCccc
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK---FS--PA--SLN-----IGGTKDTQEMLEYCAAHKIYPQ  310 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~---~~--~~--~~~-----~~~~~~~~~~~~~~~~g~~~~~  310 (344)
                      +++|++||++++...+..++++++++|+++.+|......   ..  .+  ...     ....+.++++++++.++.+.+.
T Consensus       235 ~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  314 (347)
T cd05278         235 RGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPDPLPLLGEWFGKNLTFKTGLVPVRARMPELLDLIEEGKIDPS  314 (347)
T ss_pred             CCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCcccCccchhhhceeEEEeeccCchhHHHHHHHHHHcCCCChh
Confidence            579999999998545999999999999999998651111   11  11  001     1124678899999999999863


Q ss_pred             ---eEEEeCccHHHHHHHHHcCCc-ceEEEEE
Q 019199          311 ---IETIPIENVNEALERLIKRDV-KYRFVID  338 (344)
Q Consensus       311 ---~~~~~~~~~~~a~~~~~~~~~-~gkvvi~  338 (344)
                         ...|++++++++++.+.+++. .+|++++
T Consensus       315 ~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~  346 (347)
T cd05278         315 KLITHRFPLDDILKAYRLFDNKPDGCIKVVIR  346 (347)
T ss_pred             HcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence               478999999999999988776 6898875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall

>cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=9.3e-39  Score=294.43  Aligned_cols=322  Identities=32%  Similarity=0.567  Sum_probs=267.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      |++..+...+ +..+++.+++.|.|.++|++||+.++++|++|...+.+..+ ....|.++|||++|+|+++|++++.|+
T Consensus         1 m~a~~~~~~~-~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~vG~~~~~~~   79 (341)
T cd08297           1 MKAAVVEEFG-EKPYEVKDVPVPEPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAGVVVAVGPGVSGLK   79 (341)
T ss_pred             CceEEeeccC-CCCceEEEeeCCCCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccceEEEEeCCCCCCCC
Confidence            3444444332 45788999999999999999999999999999988877654 234466899999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+..+...+|++|.+|..++.+.|++....       |....|++++|+.++++.++++|++++..++++++..+.
T Consensus        80 ~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~s~~~~~~~~~~~lp~~~~~~~~a~l~~~~~  152 (341)
T cd08297          80 VGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNS-------GYTVDGTFAEYAIADARYVTPIPDGLSFEQAAPLLCAGV  152 (341)
T ss_pred             CCCEEEEecCCCCCCCCccccCCCcccCCCcccc-------ccccCCcceeEEEeccccEEECCCCCCHHHHHHHHcchH
Confidence            9999998877778999999999999999875221       112358899999999999999999999999999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-  241 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-  241 (344)
                      |||+++... .+++++++||+|+ +.+|++++++|+.+|++|+++++++++.+.+ +++|++.+++.++.+.   +.+. 
T Consensus       153 ta~~~~~~~-~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~~~  230 (341)
T cd08297         153 TVYKALKKA-GLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELA-KELGADAFVDFKKSDDVEAVKELT  230 (341)
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCcEEEcCCCccHHHHHHHHh
Confidence            999998776 5699999999998 6799999999999999999999999998888 6899999888776433   2233 


Q ss_pred             -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-----e-----eechHhHHHHHHHHHhCCCc
Q 019199          242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-----N-----IGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-----~-----~~~~~~~~~~~~~~~~g~~~  308 (344)
                       .+++|+++|+.++...+..++++++++|+++.+|...  ..+++...+     .     ....+.++++++++.+++++
T Consensus       231 ~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  310 (341)
T cd08297         231 GGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGGFIPLDPFDLVLRGITIVGSLVGTRQDLQEALEFAARGKVK  310 (341)
T ss_pred             cCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCCCCCCCHHHHHhcccEEEEeccCCHHHHHHHHHHHHcCCCc
Confidence             3679999998776667999999999999999998652  112222211     1     11257899999999999998


Q ss_pred             cceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          309 PQIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       309 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.++.|++++++++++.+..++..||+++++
T Consensus       311 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  341 (341)
T cd08297         311 PHIQVVPLEDLNEVFEKMEEGKIAGRVVVDF  341 (341)
T ss_pred             ceeEEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence            7778899999999999999998889999875

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase

Probab=100.00  E-value=8e-39  Score=295.91  Aligned_cols=319  Identities=30%  Similarity=0.474  Sum_probs=262.2

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC------------CCCCCCCcccccceEEEEe
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG------------DSKYPLVPGHEIVGIVKEV   78 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------------~~~~p~~~G~e~~G~V~~~   78 (344)
                      +++.+......+++.+.+.|++.++||+||+.++++|++|+..+.|..+            ...+|.++|||++|+|+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~v   81 (350)
T cd08240           2 KAAAVVEPGKPLEEVEIDTPKPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLGHEIVGEVVAV   81 (350)
T ss_pred             eeEEeccCCCCceEEecCCCCCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccccceeEEEEee
Confidence            4455554555588899999999999999999999999999988776542            1235678999999999999


Q ss_pred             cCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc
Q 019199           79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA  158 (344)
Q Consensus        79 G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a  158 (344)
                      |++++++++||+|+..+.. .|+.|..|.++..+.|.+....  +     ....|++++|+.++.+.++++|+++++.++
T Consensus        82 G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~~~~~~~~~~p~~~s~~~a  153 (350)
T cd08240          82 GPDAADVKVGDKVLVYPWI-GCGECPVCLAGDENLCAKGRAL--G-----IFQDGGYAEYVIVPHSRYLVDPGGLDPALA  153 (350)
T ss_pred             CCCCCCCCCCCEEEECCcC-CCCCChHHHCcCcccCCCCCce--e-----eeccCcceeeEEecHHHeeeCCCCCCHHHe
Confidence            9999999999999887665 8999999999999999764211  1     114589999999999999999999999999


Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      +.+++.+.|||+++.....++++++|+|+|+|.+|++++++|+.+|+ +|++++.++++.+.+ +++|++.+++.++.+.
T Consensus       154 a~l~~~~~tA~~~~~~~~~~~~~~~vlI~g~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~  232 (350)
T cd08240         154 ATLACSGLTAYSAVKKLMPLVADEPVVIIGAGGLGLMALALLKALGPANIIVVDIDEAKLEAA-KAAGADVVVNGSDPDA  232 (350)
T ss_pred             ehhhchhhhHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCcEEecCCCccH
Confidence            99999999999999888876789999999889999999999999999 788888888888888 6899988888765432


Q ss_pred             ---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCc---cccC-----Cceee---eechHhHHHHHHHH
Q 019199          238 ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFS-----PASLN---IGGTKDTQEMLEYC  302 (344)
Q Consensus       238 ---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~---~~~~-----~~~~~---~~~~~~~~~~~~~~  302 (344)
                         +.+. .+++|++||++|+...+..++++++++|+++.+|....   ..+.     ...+.   ....+++.++++++
T Consensus       233 ~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~ll  312 (350)
T cd08240         233 AKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEATLPLPLLPLRALTIQGSYVGSLEELRELVALA  312 (350)
T ss_pred             HHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCCcccHHHHhhcCcEEEEcccCCHHHHHHHHHHH
Confidence               2222 24799999999976679999999999999999986511   1111     11111   12336788999999


Q ss_pred             HhCCCccc-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          303 AAHKIYPQ-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       303 ~~g~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++.+++. +..|++++++++++.+.+++..||+++.
T Consensus       313 ~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  349 (350)
T cd08240         313 KAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK  349 (350)
T ss_pred             HcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence            99999764 4889999999999999998888999874

6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy

>cd08246 crotonyl_coA_red crotonyl-CoA reductase

Probab=100.00  E-value=5.7e-39  Score=301.31  Aligned_cols=309  Identities=18%  Similarity=0.265  Sum_probs=250.8

Q ss_pred             CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC----------CCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      .+++.+++.|.++++||+||+.++++|++|++...+...          ....+.++|||++|+|+++|+.++.+++||+
T Consensus        29 ~~~~~~~~~p~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~  108 (393)
T cd08246          29 AIQLEDVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIGGSDASGIVWAVGEGVKNWKVGDE  108 (393)
T ss_pred             ceEEeecCCCCCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCccccccceEEEEEEeCCCCCcCCCCCE
Confidence            577888999999999999999999999999887765411          0112358899999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |+..+.. .|++|..|..+..+.|+...+  .++.    ...|+|++|+.+++..++++|+++++.+++.+++.+.|||+
T Consensus       109 V~~~~~~-~~~~~~~c~~~~~~~~~~~~~--~g~~----~~~g~~a~y~~v~~~~l~~iP~~l~~~~aa~l~~~~~tA~~  181 (393)
T cd08246         109 VVVHCSV-WDGNDPERAGGDPMFDPSQRI--WGYE----TNYGSFAQFALVQATQLMPKPKHLSWEEAAAYMLVGATAYR  181 (393)
T ss_pred             EEEeccc-cccCccccccccccccccccc--cccc----CCCCcceeEEEechHHeEECCCCCCHHHHhhhcccHHHHHH
Confidence            9887654 699999999999999986422  2211    23589999999999999999999999999999999999999


Q ss_pred             HHHhc--cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH------------
Q 019199          171 PMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL------------  235 (344)
Q Consensus       171 ~l~~~--~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~------------  235 (344)
                      ++...  ..+++|++|+|+|+ |++|++++++|+.+|++++++++++++++.+ +++|++++++.++.            
T Consensus       182 al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~-~~~G~~~~i~~~~~~~~~~~~~~~~~  260 (393)
T cd08246         182 MLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYC-RALGAEGVINRRDFDHWGVLPDVNSE  260 (393)
T ss_pred             HHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCCEEEcccccccccccccccch
Confidence            98655  55689999999997 9999999999999999999999888898888 67999988886321            


Q ss_pred             -------------HHHHHhc--C-CccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee---------
Q 019199          236 -------------EQMKALG--K-SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN---------  288 (344)
Q Consensus       236 -------------~~~~~~~--~-~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~---------  288 (344)
                                   +.+.+++  + ++|++||++|+.. +..++++++++|+++.+|...  ...++...+.         
T Consensus       261 ~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~l~~~~~~i~g~  339 (393)
T cd08246         261 AYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRAT-FPTSVFVCDRGGMVVICAGTTGYNHTYDNRYLWMRQKRIQGS  339 (393)
T ss_pred             hhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHh-HHHHHHHhccCCEEEEEcccCCCCCCCcHHHHhhheeEEEec
Confidence                         1122222  3 7999999999854 999999999999999998651  1122211111         


Q ss_pred             -eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcC-CcceEEEEE
Q 019199          289 -IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKR-DVKYRFVID  338 (344)
Q Consensus       289 -~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~-~~~gkvvi~  338 (344)
                       ....+.+.++++++.++.+.+.+ ++|++++++++++.+.++ +..||+++-
T Consensus       340 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvvv~  392 (393)
T cd08246         340 HFANDREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMAVL  392 (393)
T ss_pred             ccCcHHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEEEe
Confidence             12235788999999999998654 899999999999999998 788999874

Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma

>TIGR01751 crot-CoA-red crotonyl-CoA reductase

Probab=100.00  E-value=7.4e-39  Score=300.85  Aligned_cols=331  Identities=18%  Similarity=0.266  Sum_probs=264.1

Q ss_pred             Cccccccceeeeee--cC-CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC----------CCCCC-CCc
Q 019199            2 TSETASKDCLGWAA--RD-PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYP-LVP   67 (344)
Q Consensus         2 ~~~~~~~~~~~~~~--~~-~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p-~~~   67 (344)
                      |-+..+|++..+..  ++ ++..+++.+++.|.|.+++|+||+.++++|++|++...+...          ....| .++
T Consensus         2 ~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~p~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~v~   81 (398)
T TIGR01751         2 TVVPETMYAFAIREERDGDPRQAIQLEVVPVPELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPFHII   81 (398)
T ss_pred             cccchhhhheEEecccCCCcccceEEeecCCCCCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCceec
Confidence            44556777777754  33 346688899999999999999999999999999876554321          01223 379


Q ss_pred             ccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEE
Q 019199           68 GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY  147 (344)
Q Consensus        68 G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  147 (344)
                      |||++|+|+++|+.++.+++||+|+..+.. .|++|.+|..|+...|+...+  .+.    ....|+|++|+.++++.++
T Consensus        82 G~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~g~----~~~~g~~ae~~~v~~~~~~  154 (398)
T TIGR01751        82 GSDASGVVWRVGPGVTRWKVGDEVVASCLQ-VDLTAPDGRVGDPMLSSEQRI--WGY----ETNFGSFAEFALVKDYQLM  154 (398)
T ss_pred             ccceEEEEEEeCCCCCCCCCCCEEEEcccc-ccCCchhhccCcccccccccc--ccc----cCCCccceEEEEechHHeE
Confidence            999999999999999999999999887654 799999999999999975421  110    0135899999999999999


Q ss_pred             EcCCCCCcccccccchhhhHhHHHHHh--ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC
Q 019199          148 KIANDYPLALAAPLLCAGITVYTPMMR--HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL  224 (344)
Q Consensus       148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~--~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~  224 (344)
                      ++|+++++.+++.+.+.+.|||+++..  ...+.+|++|+|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++
T Consensus       155 ~vP~~l~~~~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~-~~~  233 (398)
T TIGR01751       155 PKPKHLTWEEAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYC-REL  233 (398)
T ss_pred             ECCCCCCHHHHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHc
Confidence            999999999999999999999999865  455689999999998 9999999999999999998888888888888 579


Q ss_pred             CCcEEEeCCCHH-------------------------HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          225 GADKFVVSSDLE-------------------------QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       225 g~~~~v~~~~~~-------------------------~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |++.++++++.+                         .+.+.+  +++|++||++|... +..++++++++|+++.+|..
T Consensus       234 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~  312 (398)
T TIGR01751       234 GAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRAT-FPTSVFVCRRGGMVVICGGT  312 (398)
T ss_pred             CCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHH-HHHHHHhhccCCEEEEEccc
Confidence            999998865321                         111222  57999999999754 99999999999999999875


Q ss_pred             Cc--cccCCceee----------eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          278 SK--VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       278 ~~--~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      ..  ..++...+.          ....+.++++++++.++.+.+.+ +++++++++++++.+.+++..||+|+.+..
T Consensus       313 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~  389 (398)
T TIGR01751       313 TGYNHDYDNRYLWMRQKRIQGSHFANLREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNVAVLVLA  389 (398)
T ss_pred             cCCCCCcCHHHHhhcccEEEccccCcHHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceEEEEeCC
Confidence            21  222211111          22234578899999999998755 899999999999999999989999998864

The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae.

>PRK13771 putative alcohol dehydrogenase; Provisional

Probab=100.00  E-value=5.5e-39  Score=295.07  Aligned_cols=315  Identities=27%  Similarity=0.414  Sum_probs=260.0

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      +++..++...+++++.+.|++.++|++||+.++++|++|+....|..+...+|.++|||++|+|+++|+.++.+++||+|
T Consensus         3 a~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V   82 (334)
T PRK13771          3 AVILPGFKQGYRIEEVPDPKPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVGTVEEVGENVKGFKPGDRV   82 (334)
T ss_pred             eEEEcCCCCCcEEEeCCCCCCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceEEEEEeCCCCccCCCCCEE
Confidence            44444444568999999999999999999999999999998887766545667899999999999999999889999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      +..+. ..|++|.+|..|.++.|+.....       +....|+|++|+.++.+.++++|+++++.+++.+++.+.+||++
T Consensus        83 ~~~~~-~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~l~~~~~~a~~~  154 (334)
T PRK13771         83 ASLLY-APDGTCEYCRSGEEAYCKNRLGY-------GEELDGFFAEYAKVKVTSLVKVPPNVSDEGAVIVPCVTGMVYRG  154 (334)
T ss_pred             EECCC-CCCcCChhhcCCCcccCcccccc-------ccccCceeeeeeecchhceEECCCCCCHHHhhcccchHHHHHHH
Confidence            88755 48999999999999999885321       22346899999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHhcCCccEEE
Q 019199          172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFII  249 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~dvvi  249 (344)
                      +... .++++++|+|+|+ |.+|++++++++.+|++|+++++++++.+.+ +++ ++++++.+.. +.+.+. +++|+++
T Consensus       155 ~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~-~~~-~~~~~~~~~~~~~v~~~-~~~d~~l  230 (334)
T PRK13771        155 LRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIV-SKY-ADYVIVGSKFSEEVKKI-GGADIVI  230 (334)
T ss_pred             HHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHH-HHHhcCchhHHHHHHhc-CCCcEEE
Confidence            9877 6799999999998 9999999999999999999999999988888 567 7666665421 222233 4799999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCCCc-----cccCCc-----eee---eechHhHHHHHHHHHhCCCccce-EEEe
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSK-----VKFSPA-----SLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIP  315 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-----~~~~~~-----~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~  315 (344)
                      |++|+.. +..++++++++|+++.+|....     ..+...     .+.   ....+.++++++++.++.+++.+ +.|+
T Consensus       231 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~  309 (334)
T PRK13771        231 ETVGTPT-LEESLRSLNMGGKIIQIGNVDPSPTYSLRLGYIILKDIEIIGHISATKRDVEEALKLVAEGKIKPVIGAEVS  309 (334)
T ss_pred             EcCChHH-HHHHHHHHhcCCEEEEEeccCCCCCcccCHHHHHhcccEEEEecCCCHHHHHHHHHHHHcCCCcceEeeeEc
Confidence            9999865 8999999999999999986511     111100     111   22357889999999999998654 8999


Q ss_pred             CccHHHHHHHHHcCCcceEEEEEe
Q 019199          316 IENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       316 ~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++++++|++.+.+++..||+++..
T Consensus       310 ~~~~~~a~~~~~~~~~~~kvv~~~  333 (334)
T PRK13771        310 LSEIDKALEELKDKSRIGKILVKP  333 (334)
T ss_pred             HHHHHHHHHHHHcCCCcceEEEec
Confidence            999999999999888889999864

>cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases

Probab=100.00  E-value=9.3e-39  Score=296.91  Aligned_cols=322  Identities=22%  Similarity=0.340  Sum_probs=259.4

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      +++....++.++++++++|++.+++|+||+.++++|++|++.+.+... ..+|.++|||++|+|+++|++++.+++||+|
T Consensus         3 a~~~~~~~~~~~~~~~~~p~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G~V~~vG~~v~~~~~Gd~V   81 (365)
T cd05279           3 AAVLWEKGKPLSIEEIEVAPPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAGIVESIGPGVTTLKPGDKV   81 (365)
T ss_pred             eeEEecCCCCcEEEEeecCCCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeEEEEEeCCCcccCCCCCEE
Confidence            455555666789999999999999999999999999999998877654 3567899999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCcccccc-ccc-------------cCCCCccCCcceeEEEEecceEEEcCCCCCccc
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAI-------------DADGTITKGGYSSYIVVHERYCYKIANDYPLAL  157 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~-------------~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~  157 (344)
                      +..+. .+|++|.+|..+.++.|....+.. .+.             ...+....|+|++|+.++++.++++|+++++.+
T Consensus        82 v~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~lP~~~~~~~  160 (365)
T cd05279          82 IPLFG-PQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEISLAKIDPDAPLEK  160 (365)
T ss_pred             EEcCC-CCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCceEECCCCCCHHH
Confidence            88765 489999999999999998764321 111             111111247899999999999999999999999


Q ss_pred             ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCH-
Q 019199          158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDL-  235 (344)
Q Consensus       158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-  235 (344)
                      ++.+.+++.+||+++.....+++|++|||+|+|.+|++++++|+.+|++ |+++++++++.+.+ +++|++++++.++. 
T Consensus       161 a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~  239 (365)
T cd05279         161 VCLIGCGFSTGYGAAVNTAKVTPGSTCAVFGLGGVGLSVIMGCKAAGASRIIAVDINKDKFEKA-KQLGATECINPRDQD  239 (365)
T ss_pred             hhHhccchhHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCeeccccccc
Confidence            9999999999999987777789999999998899999999999999995 67777788888888 78999988887654 


Q ss_pred             -HH---HHH-hcCCccEEEECCCCchhHHHHHHhcc-cCCEEEEEcCC---CccccCCceee------------eechHh
Q 019199          236 -EQ---MKA-LGKSLDFIIDTASGDHPFDAYMSLLK-VAGVYVLVGFP---SKVKFSPASLN------------IGGTKD  294 (344)
Q Consensus       236 -~~---~~~-~~~~~dvvid~~g~~~~~~~~~~~l~-~~G~iv~~g~~---~~~~~~~~~~~------------~~~~~~  294 (344)
                       +.   +.+ ..+++|+++|++|....+..++++++ ++|+++.+|..   ....++...+.            ....+.
T Consensus       240 ~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~l~g~~~~~~~~~~~  319 (365)
T cd05279         240 KPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSGTEATLDPNDLLTGRTIKGTVFGGWKSKDS  319 (365)
T ss_pred             chHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCCCceeeCHHHHhcCCeEEEEeccCCchHhH
Confidence             32   222 24689999999987667999999999 99999999854   22222222211            123467


Q ss_pred             HHHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          295 TQEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       295 ~~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      +.++++++.++.+.+   .+++|+++++++||+.+.+++. .|+++
T Consensus       320 ~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~~~~~  364 (365)
T cd05279         320 VPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGES-IRTIL  364 (365)
T ss_pred             HHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCc-eeeee
Confidence            899999999999874   3488999999999999887664 46665

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall

>cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1

Probab=100.00  E-value=4.5e-39  Score=294.45  Aligned_cols=280  Identities=18%  Similarity=0.227  Sum_probs=227.3

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC-CCCCCEEEEeccc
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR-FKVGDHVGVGTYV   97 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~-~~~Gd~V~~~~~~   97 (344)
                      ..+++.+++.|+|+++||+||+.++++|++|++...|..+ ...+|.++|||++|+|+++|+++++ |++||+|+..+. 
T Consensus        16 ~~~~~~~~~~p~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~~vGd~V~~~~~-   94 (324)
T cd08291          16 KELSLPEPEVPEPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSGTVVAAGGGPLAQSLIGKRVAFLAG-   94 (324)
T ss_pred             cEEEecccCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEEEEEEECCCccccCCCCCEEEecCC-
Confidence            3577888899999999999999999999999998887654 2456889999999999999999986 999999974220 


Q ss_pred             cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199           98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM  177 (344)
Q Consensus        98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~  177 (344)
                                                       ..|+|++|+.++++.++++|+++++.+++++++.+.|||..+. ...
T Consensus        95 ---------------------------------~~g~~a~~~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~-~~~  140 (324)
T cd08291          95 ---------------------------------SYGTYAEYAVADAQQCLPLPDGVSFEQGASSFVNPLTALGMLE-TAR  140 (324)
T ss_pred             ---------------------------------CCCcchheeeecHHHeEECCCCCCHHHHhhhcccHHHHHHHHH-hhc
Confidence                                             1389999999999999999999999999988888999986553 334


Q ss_pred             CCCCCEEEEE-C-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEE
Q 019199          178 NQPGKSLGVI-G-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIID  250 (344)
Q Consensus       178 ~~~g~~vlI~-G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid  250 (344)
                       .++++++|+ | +|++|++++|+|+.+|++|+++++++++++.+ +++|++++++.+..+..   .+..  +++|++||
T Consensus       141 -~~~~~vlv~~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~v~~~~~~~~~d~vid  218 (324)
T cd08291         141 -EEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLL-KKIGAEYVLNSSDPDFLEDLKELIAKLNATIFFD  218 (324)
T ss_pred             -cCCCcEEEEccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCccHHHHHHHHhCCCCCcEEEE
Confidence             356666664 4 59999999999999999999999999998888 68999999987765433   2332  57999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCC-C-cc-ccCCc-------eee--e-------echHhHHHHHHHHHhCCCccce
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFP-S-KV-KFSPA-------SLN--I-------GGTKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~-~~-~~~~~-------~~~--~-------~~~~~~~~~~~~~~~g~~~~~~  311 (344)
                      ++|+.. ....+++++++|+++.+|.. . .. .++..       .+.  .       ...+.+++++++++ +.+++.+
T Consensus       219 ~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i  296 (324)
T cd08291         219 AVGGGL-TGQILLAMPYGSTLYVYGYLSGKLDEPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTF  296 (324)
T ss_pred             CCCcHH-HHHHHHhhCCCCEEEEEEecCCCCcccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-Cccccce
Confidence            999876 78889999999999999864 1 11 12111       111  0       11346788888888 8898876


Q ss_pred             -EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          312 -ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                       ++|+++|+.+|++.+.+++..||+++.
T Consensus       297 ~~~~~l~~~~~a~~~~~~~~~~Gkvv~~  324 (324)
T cd08291         297 ASRYPLALTLEAIAFYSKNMSTGKKLLI  324 (324)
T ss_pred             eeEEcHHHHHHHHHHHHhCCCCCeEEeC
Confidence             899999999999999999989999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin

>cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1e-38  Score=295.13  Aligned_cols=317  Identities=19%  Similarity=0.301  Sum_probs=253.2

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---------CCCCCCCcccccceEEEEecCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---------DSKYPLVPGHEIVGIVKEVGHN   81 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---------~~~~p~~~G~e~~G~V~~~G~~   81 (344)
                      ++++.+ .++.+++++.+.|++.+++|+||+.++++|++|+..+.|...         ..++|.++|||++|+|+++|+.
T Consensus         2 ka~~~~-~~~~~~~~~~~~p~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~   80 (350)
T cd08256           2 RAVVCH-GPQDYRLEEVPVPRPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEFVGRVVELGEG   80 (350)
T ss_pred             eeEEEe-cCCceEEEECCCCCCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcceeEEEEEeCCC
Confidence            345554 456789999999999999999999999999999988877531         1146778999999999999999


Q ss_pred             CC--CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc-eEEEcCCCCCcccc
Q 019199           82 VS--RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER-YCYKIANDYPLALA  158 (344)
Q Consensus        82 ~~--~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~-~~~~~P~~~~~~~a  158 (344)
                      ++  .|++||+|+..+. .+|++|..|..|..+.|....  +.+...   ...|+|++|+.++++ .++++|+++++.++
T Consensus        81 v~~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~~~~~~~--~~g~~~---~~~g~~~~~~~~~~~~~~~~lP~~~~~~~a  154 (350)
T cd08256          81 AEERGVKVGDRVISEQI-VPCWNCRFCNRGQYWMCQKHD--LYGFQN---NVNGGMAEYMRFPKEAIVHKVPDDIPPEDA  154 (350)
T ss_pred             cccCCCCCCCEEEECCc-CCCCCChHHhCcCcccCcCcc--ceeecc---CCCCcceeeEEcccccceEECCCCCCHHHH
Confidence            98  8999999987654 489999999999999997542  222111   145899999999988 57899999999999


Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH-
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE-  236 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-  236 (344)
                      +.+ .++.|+|.++ ....+++|++|+|.|+|++|++++++|+.+|++ ++++++++++...+ +++|++.+++....+ 
T Consensus       155 a~~-~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~  231 (350)
T cd08256         155 ILI-EPLACALHAV-DRANIKFDDVVVLAGAGPLGLGMIGAARLKNPKKLIVLDLKDERLALA-RKFGADVVLNPPEVDV  231 (350)
T ss_pred             hhh-hHHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHH-HHcCCcEEecCCCcCH
Confidence            887 7889999998 555669999999977899999999999999984 67777787777766 789999888776432 


Q ss_pred             --HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCcee--------e--eechHhHHHHHHH
Q 019199          237 --QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASL--------N--IGGTKDTQEMLEY  301 (344)
Q Consensus       237 --~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~--------~--~~~~~~~~~~~~~  301 (344)
                        .+.+..  .++|++||++|+...+..++++++++|+++.+|.. ....+....+        .  ......+++++++
T Consensus       232 ~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~  311 (350)
T cd08256         232 VEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDPVTVDWSIIGDRKELDVLGSHLGPYCYPIAIDL  311 (350)
T ss_pred             HHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCCCccChhHhhcccccEEEEeccCchhHHHHHHH
Confidence              233332  46999999999765689999999999999999865 2222221111        0  1223468889999


Q ss_pred             HHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          302 CAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       302 ~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      +.++.+++   ..+.|+++++++|++.+.+++..+|+++
T Consensus       312 ~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~  350 (350)
T cd08256         312 IASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL  350 (350)
T ss_pred             HHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence            99999986   3589999999999999999888899874

This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH,

>cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase

Probab=100.00  E-value=1.3e-38  Score=295.83  Aligned_cols=323  Identities=24%  Similarity=0.393  Sum_probs=260.9

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++......+.+++++++.|++.+++|+||+.++++|+.|...+.|..+ ..+|.++|||++|+|+++|++++.|++||+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~p~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (363)
T cd08279           2 RAAVLHEVGKPLEIEEVELDDPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAGVVEEVGPGVTGVKPGDH   80 (363)
T ss_pred             eEEEEecCCCCceEEEeeCCCCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceEEEEEeCCCccccCCCCE
Confidence            3555544446788899999999999999999999999999988887664 356788999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccc--------cCCC-----CccCCcceeEEEEecceEEEcCCCCCccc
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI--------DADG-----TITKGGYSSYIVVHERYCYKIANDYPLAL  157 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~--------~~~~-----~~~~g~~~~~~~~~~~~~~~~P~~~~~~~  157 (344)
                      |+..+.. .|++|.+|.+++.+.|.+..+...+.        ..+|     ....|+|++|+.++++.++++|+++++.+
T Consensus        81 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~  159 (363)
T cd08279          81 VVLSWIP-ACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASVVKIDDDIPLDR  159 (363)
T ss_pred             EEECCCC-CCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccEEECCCCCChHH
Confidence            9876654 89999999999999998653211111        1111     12358999999999999999999999999


Q ss_pred             ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH
Q 019199          158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE  236 (344)
Q Consensus       158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~  236 (344)
                      ++.+++.+.|||.++.....+.+|++|||+|+|.+|++++++|+.+|++ |+++++++++.+.+ +++|++++++.+..+
T Consensus       160 aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~-~~~g~~~vv~~~~~~  238 (363)
T cd08279         160 AALLGCGVTTGVGAVVNTARVRPGDTVAVIGCGGVGLNAIQGARIAGASRIIAVDPVPEKLELA-RRFGATHTVNASEDD  238 (363)
T ss_pred             eehhcchhHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHH-HHhCCeEEeCCCCcc
Confidence            9999999999999987777789999999998899999999999999995 88888888888877 689999888876543


Q ss_pred             H---HHHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCceee-------------eechHhH
Q 019199          237 Q---MKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLN-------------IGGTKDT  295 (344)
Q Consensus       237 ~---~~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~-------------~~~~~~~  295 (344)
                      .   +.+.  .+++|+++|++++...+..++++++++|+++.+|...   ...++...+.             ....+.+
T Consensus       239 ~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  318 (363)
T cd08279         239 AVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPGETVSLPALELFLSEKRLQGSLYGSANPRRDI  318 (363)
T ss_pred             HHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCCcccccCHHHHhhcCcEEEEEEecCcCcHHHH
Confidence            3   3333  3679999999997666899999999999999997541   2222222111             0234678


Q ss_pred             HHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEE
Q 019199          296 QEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFV  336 (344)
Q Consensus       296 ~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvv  336 (344)
                      +++++++.++.+++   ..++|+++++.+|++.+.+++..+.|+
T Consensus       319 ~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~  362 (363)
T cd08279         319 PRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI  362 (363)
T ss_pred             HHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence            99999999999975   347899999999999999888765544

Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me

>cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1

Probab=100.00  E-value=1.8e-38  Score=297.03  Aligned_cols=323  Identities=22%  Similarity=0.306  Sum_probs=256.2

Q ss_pred             eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++.+. .++.+++++++.|.| ++++|+||+.++++|++|+..+.|..+..++|.++|||++|+|+++|+.++++++||+
T Consensus         3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   81 (386)
T cd08283           3 ALVWH-GKGDVRVEEVPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMGVVEEVGPEVRNLKVGDR   81 (386)
T ss_pred             eEEEe-cCCCceEEeCCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceEEEEEeCCCCCCCCCCCE
Confidence            34444 457789999999998 4999999999999999999999887755566889999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCcccccc--------ccccCCC-----CccCCcceeEEEEecc--eEEEcCCCCCc
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTF--------NAIDADG-----TITKGGYSSYIVVHER--YCYKIANDYPL  155 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~--------~~~~~~~-----~~~~g~~~~~~~~~~~--~~~~~P~~~~~  155 (344)
                      |+..+.. .|++|.+|..+.++.|.+.....        ...+..+     ....|+|++|+.++.+  .++++|+++++
T Consensus        82 V~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~  160 (386)
T cd08283          82 VVVPFTI-ACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADVGPFKIPDDLSD  160 (386)
T ss_pred             EEEcCcC-CCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccCeEEECCCCCCH
Confidence            9887655 69999999999999998743211        0000101     0136899999999987  89999999999


Q ss_pred             ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       156 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      .+++.++..+.|||+++ ....+++|++|||+|+|.+|++++++|+.+|+ +|++++.++++.+.+ ++++...+++...
T Consensus       161 ~~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~-~~~~~~~vi~~~~  238 (386)
T cd08283         161 EKALFLSDILPTGYHAA-ELAEVKPGDTVAVWGCGPVGLFAARSAKLLGAERVIAIDRVPERLEMA-RSHLGAETINFEE  238 (386)
T ss_pred             HHHhhhccchhhhHHHH-hhccCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCcEEEcCCc
Confidence            99999999999999999 56667999999999889999999999999998 699999999998888 5664345676654


Q ss_pred             HH-HHH---Hhc--CCccEEEECCCCc---------------------hhHHHHHHhcccCCEEEEEcCCCc--cccCCc
Q 019199          235 LE-QMK---ALG--KSLDFIIDTASGD---------------------HPFDAYMSLLKVAGVYVLVGFPSK--VKFSPA  285 (344)
Q Consensus       235 ~~-~~~---~~~--~~~dvvid~~g~~---------------------~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~  285 (344)
                      .+ ...   +..  +++|++||++|+.                     ..+..++++++++|+++.+|....  ..++..
T Consensus       239 ~~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~  318 (386)
T cd08283         239 VDDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVSIIGVYGGTVNKFPIG  318 (386)
T ss_pred             chHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEEEEcCCCCCcCccCHH
Confidence            42 222   222  4799999999753                     347889999999999999986521  111110


Q ss_pred             -------eee---eechHhHHHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCC-cceEEEEE
Q 019199          286 -------SLN---IGGTKDTQEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRD-VKYRFVID  338 (344)
Q Consensus       286 -------~~~---~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~-~~gkvvi~  338 (344)
                             .+.   ....+.++++++++.++++.+   ..+.|+++++.+|++.+.+++ ..+|++|+
T Consensus       319 ~~~~~~~~i~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~  385 (386)
T cd08283         319 AAMNKGLTLRMGQTHVQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFDKKEDGCIKVVLK  385 (386)
T ss_pred             HHHhCCcEEEeccCCchHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHHhCCCCeEEEEec
Confidence                   000   122357889999999999976   238899999999999988876 45899985

Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T

>cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD)

Probab=100.00  E-value=1.6e-38  Score=291.45  Aligned_cols=303  Identities=36%  Similarity=0.564  Sum_probs=256.4

Q ss_pred             CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCC
Q 019199           21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSC  100 (344)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c  100 (344)
                      .+++.+.+.|.+.++||+||+.++++|++|+....|..+...+|.++|||++|+|+++|++++++++||+|++.+.+..|
T Consensus        16 ~~~~~~~~~~~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~~~~~   95 (329)
T cd08298          16 PLRLTEVPVPEPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVGRVEAVGPGVTRFSVGDRVGVPWLGSTC   95 (329)
T ss_pred             CceEEeccCCCCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccEEEEEECCCCCCCcCCCEEEEeccCCCC
Confidence            67777888888999999999999999999999888866555668899999999999999999999999999888777789


Q ss_pred             CCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCC
Q 019199          101 RDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP  180 (344)
Q Consensus       101 ~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  180 (344)
                      ++|.+|..+..++|+...+.       +....|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++ ...++++
T Consensus        96 ~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~~~~~~~~~~ta~~~~-~~~~~~~  167 (329)
T cd08298          96 GECRYCRSGRENLCDNARFT-------GYTVDGGYAEYMVADERFAYPIPEDYDDEEAAPLLCAGIIGYRAL-KLAGLKP  167 (329)
T ss_pred             CCChhHhCcChhhCCCcccc-------ccccCCceEEEEEecchhEEECCCCCCHHHhhHhhhhhHHHHHHH-HhhCCCC
Confidence            99999999999999876432       112358899999999999999999999999999999999999999 6677799


Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      +++++|+|+|++|++++++++..|++|+++++++++.+.+ +++|++.+++....     ..+++|+++++.+....+..
T Consensus       168 ~~~vlV~g~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~-----~~~~vD~vi~~~~~~~~~~~  241 (329)
T cd08298         168 GQRLGLYGFGASAHLALQIARYQGAEVFAFTRSGEHQELA-RELGADWAGDSDDL-----PPEPLDAAIIFAPVGALVPA  241 (329)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHCCCeEEEEcCChHHHHHH-HHhCCcEEeccCcc-----CCCcccEEEEcCCcHHHHHH
Confidence            9999999999999999999999999999999999888888 78999887766532     23579999998766666999


Q ss_pred             HHHhcccCCEEEEEcCCC-cc-ccCCceee---------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHHHHHcC
Q 019199          261 YMSLLKVAGVYVLVGFPS-KV-KFSPASLN---------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKR  329 (344)
Q Consensus       261 ~~~~l~~~G~iv~~g~~~-~~-~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~~~~~  329 (344)
                      ++++++++|+++.+|... .. .++...+.         ....+.++.+++++.++.+++.+++|+++++++|++.+.++
T Consensus       242 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~a~~~~~~~  321 (329)
T cd08298         242 ALRAVKKGGRVVLAGIHMSDIPAFDYELLWGEKTIRSVANLTRQDGEEFLKLAAEIPIKPEVETYPLEEANEALQDLKEG  321 (329)
T ss_pred             HHHHhhcCCEEEEEcCCCCCCCccchhhhhCceEEEEecCCCHHHHHHHHHHHHcCCCCceEEEEeHHHHHHHHHHHHcC
Confidence            999999999999988541 11 11100000         12345788899999999998767899999999999999999


Q ss_pred             CcceEEEE
Q 019199          330 DVKYRFVI  337 (344)
Q Consensus       330 ~~~gkvvi  337 (344)
                      +..||+|+
T Consensus       322 ~~~~~~v~  329 (329)
T cd08298         322 RIRGAAVL  329 (329)
T ss_pred             CCcceeeC
Confidence            98899874

These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha

>cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins

Probab=100.00  E-value=1.3e-38  Score=292.10  Aligned_cols=317  Identities=42%  Similarity=0.698  Sum_probs=264.1

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      ++.+.+..+.+++.+.+.|.+.+++++|++.++++|++|...+.+......+|.++|||++|+|+++|+++++|++||+|
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G~v~~~g~~~~~~~~Gd~V   81 (330)
T cd08245           2 AAVVHAAGGPLEPEEVPVPEPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVGEVVEVGAGVEGRKVGDRV   81 (330)
T ss_pred             eEEEecCCCCceEEeccCCCCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceEEEEEECCCCcccccCCEE
Confidence            44554454678999999999999999999999999999998888766544568899999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      ++.+...+|+.|.+|.+++.+.|++..+.  +     ....|++++|+.+++..++++|+++++.+++.+++.+.|||++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~l~~~~~ta~~~  154 (330)
T cd08245          82 GVGWLVGSCGRCEYCRRGLENLCQKAVNT--G-----YTTQGGYAEYMVADAEYTVLLPDGLPLAQAAPLLCAGITVYSA  154 (330)
T ss_pred             EEccccCCCCCChhhhCcCcccCcCcccc--C-----cccCCccccEEEEcHHHeEECCCCCCHHHhhhhhhhHHHHHHH
Confidence            88776568999999999999999985332  1     1135889999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEEC
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      +.. ..++++++|+|+|+|.+|++++++|+.+|++|+++++++++.+.+ +++|++.+++...........+++|+++|+
T Consensus       155 l~~-~~~~~~~~vlI~g~g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~d~vi~~  232 (330)
T cd08245         155 LRD-AGPRPGERVAVLGIGGLGHLAVQYARAMGFETVAITRSPDKRELA-RKLGADEVVDSGAELDEQAAAGGADVILVT  232 (330)
T ss_pred             HHh-hCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCcEEeccCCcchHHhccCCCCEEEEC
Confidence            876 456999999999988899999999999999999999999998888 678988888765543333333579999999


Q ss_pred             CCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccH
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENV  319 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  319 (344)
                      ++.......++++++++|+++.+|..  ....+....+.          ....+.++++++++.++.+++.++.|+++++
T Consensus       233 ~~~~~~~~~~~~~l~~~G~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~  312 (330)
T cd08245         233 VVSGAAAEAALGGLRRGGRIVLVGLPESPPFSPDIFPLIMKRQSIAGSTHGGRADLQEALDFAAEGKVKPMIETFPLDQA  312 (330)
T ss_pred             CCcHHHHHHHHHhcccCCEEEEECCCCCCccccchHHHHhCCCEEEEeccCCHHHHHHHHHHHHcCCCcceEEEEcHHHH
Confidence            88766799999999999999999854  11111111111          1145678889999999999876789999999


Q ss_pred             HHHHHHHHcCCcceEEEE
Q 019199          320 NEALERLIKRDVKYRFVI  337 (344)
Q Consensus       320 ~~a~~~~~~~~~~gkvvi  337 (344)
                      .++|+.+.+++..||+|+
T Consensus       313 ~~a~~~~~~~~~~~~~v~  330 (330)
T cd08245         313 NEAYERMEKGDVRFRFVL  330 (330)
T ss_pred             HHHHHHHHcCCCCcceeC
Confidence            999999999988899875

Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an

>cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.9e-38  Score=290.78  Aligned_cols=319  Identities=27%  Similarity=0.378  Sum_probs=262.7

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++|........+.+.+++.|.+.+++|+||+.++++|++|+....|..+...+|.++|||++|+|+++|++++.|++||+
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~~~~~~~Gd~   81 (345)
T cd08260           2 RAAVYEEFGEPLEIREVPDPEPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAGVVVEVGEDVSRWRVGDR   81 (345)
T ss_pred             eeEEEecCCCCcEEEEccCCCCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeEEEEEECCCCccCCCCCE
Confidence            44444434445888899999999999999999999999999888876654456789999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+. +....|++|.+|..|..+.|.....  .     +....|+|++|+.+++.  .++++|+++++.+++.++..+.||
T Consensus        82 V~~-~~~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~~~iP~~~~~~~aa~l~~~~~ta  153 (345)
T cd08260          82 VTV-PFVLGCGTCPYCRAGDSNVCEHQVQ--P-----GFTHPGSFAEYVAVPRADVNLVRLPDDVDFVTAAGLGCRFATA  153 (345)
T ss_pred             EEE-CCCCCCCCCccccCcCcccCCCCcc--c-----ccCCCCcceeEEEcccccCceEECCCCCCHHHhhhhccchHHH
Confidence            977 4446899999999999999997421  1     11235899999999975  899999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HHHH---HHhc-C
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQM---KALG-K  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~---~~~~-~  243 (344)
                      |+++.....+.++++|+|+|+|.+|++++++|+.+|++|+++++++++.+.+ +++|++++++.+. .+..   .+.. +
T Consensus       154 ~~~l~~~~~~~~~~~vlV~g~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~~~~~~~~~~~  232 (345)
T cd08260         154 FRALVHQARVKPGEWVAVHGCGGVGLSAVMIASALGARVIAVDIDDDKLELA-RELGAVATVNASEVEDVAAAVRDLTGG  232 (345)
T ss_pred             HHHHHHccCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHhCCCEEEccccchhHHHHHHHHhCC
Confidence            9998777777999999999999999999999999999999999999998888 6799999998876 3332   2222 4


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--c--cccCCcee-------e---eechHhHHHHHHHHHhCCCcc
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--K--VKFSPASL-------N---IGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~--~~~~~~~~-------~---~~~~~~~~~~~~~~~~g~~~~  309 (344)
                      ++|++||++|+...+...+++++++|+++.+|...  .  ..++...+       .   ....+.+++++++++++++.+
T Consensus       233 ~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~  312 (345)
T cd08260         233 GAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEAGVALPMDRVVARELEIVGSHGMPAHRYDAMLALIASGKLDP  312 (345)
T ss_pred             CCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCCccccCHHHHhhcccEEEeCCcCCHHHHHHHHHHHHcCCCCh
Confidence            79999999997656899999999999999998651  1  22221111       1   223467899999999999875


Q ss_pred             ---ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          310 ---QIETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       310 ---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                         ..+.+++++++++++.+.+++..||+|+.
T Consensus       313 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~  344 (345)
T cd08260         313 EPLVGRTISLDEAPDALAAMDDYATAGITVIT  344 (345)
T ss_pred             hhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence               34889999999999999999888998863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty

>cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=5.3e-38  Score=289.84  Aligned_cols=319  Identities=22%  Similarity=0.356  Sum_probs=257.5

Q ss_pred             eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++.+. .++.+++++++.|+| .++||+||+.++++|++|+..+.|..+...+|.++|||++|+|+++|++++.+++||+
T Consensus         3 a~~~~-~~~~~~~~~~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~   81 (345)
T cd08286           3 ALVYH-GPGKISWEDRPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVGVVEEVGSAVTNFKVGDR   81 (345)
T ss_pred             eEEEe-cCCceeEEecCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceEEEEEeccCccccCCCCE
Confidence            34443 344688999999996 8999999999999999999998887654455789999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |++.+.. .|++|.+|..+..+.|....+. .     +....|++++|+.++.+  .++++|++++..+++.+++.+.||
T Consensus        82 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~g~~~~~~~v~~~~~~~~~lp~~~~~~~aa~l~~~~~ta  154 (345)
T cd08286          82 VLISCIS-SCGTCGYCRKGLYSHCESGGWI-L-----GNLIDGTQAEYVRIPHADNSLYKLPEGVDEEAAVMLSDILPTG  154 (345)
T ss_pred             EEECCcC-CCCCChHHHCcCcccCCCcccc-c-----ccccCCeeeeEEEcccccCceEECCCCCCHHHhhhccchhHHH
Confidence            9887665 7999999999999988865331 1     22345899999999987  899999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHh--c
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KAL--G  242 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--~  242 (344)
                      |.++.....+++|++|||.|+|.+|++++|+|+.+| .+|+++++++++...+ +++|++.+++....+..   .+.  .
T Consensus       155 ~~~~~~~~~~~~g~~vlI~g~g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~i~~~~~~  233 (345)
T cd08286         155 YECGVLNGKVKPGDTVAIVGAGPVGLAALLTAQLYSPSKIIMVDLDDNRLEVA-KKLGATHTVNSAKGDAIEQVLELTDG  233 (345)
T ss_pred             HHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCceeccccccHHHHHHHHhCC
Confidence            987766667799999999988999999999999999 6899988888787766 68999998887654322   222  2


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHhHHHHHHHHHhCCCcc---
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKDTQEMLEYCAAHKIYP---  309 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~~---  309 (344)
                      +++|++||+++....+..+++.++++|+++.+|.. ....++.....         ....+.+++++++++++.+++   
T Consensus       234 ~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  313 (345)
T cd08286         234 RGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKPVDLHLEKLWIKNITITTGLVDTNTTPMLLKLVSSGKLDPSKL  313 (345)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCCCCcCHHHHhhcCcEEEeecCchhhHHHHHHHHHcCCCChHHc
Confidence            57999999998766689999999999999999865 22222221111         111256888999999999875   


Q ss_pred             ceEEEeCccHHHHHHHHHcCC--cceEEEEEe
Q 019199          310 QIETIPIENVNEALERLIKRD--VKYRFVIDI  339 (344)
Q Consensus       310 ~~~~~~~~~~~~a~~~~~~~~--~~gkvvi~~  339 (344)
                      ..++|++++++++++.+.+..  ...|++|++
T Consensus       314 ~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~  345 (345)
T cd08286         314 VTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF  345 (345)
T ss_pred             EEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence            248899999999999998764  345998863

This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (

>KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion]

Probab=100.00  E-value=2.1e-38  Score=267.79  Aligned_cols=302  Identities=23%  Similarity=0.256  Sum_probs=250.1

Q ss_pred             ccccccceeeeeecCCC-CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecC
Q 019199            3 SETASKDCLGWAARDPS-GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         3 ~~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      .|+.+.++++|..++.| ..+++.+++.|+....+|+||..|+.|||+|+..++|.++ .+.+|.+-|+|++|+|+.+|+
T Consensus        15 q~~~~~kalvY~~hgdP~kVlql~~~~~p~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnEGv~eVv~vGs   94 (354)
T KOG0025|consen   15 QMPARSKALVYSEHGDPAKVLQLKNLELPAVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNEGVGEVVAVGS   94 (354)
T ss_pred             ccccccceeeecccCCchhhheeecccCCCCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCcceEEEEEecC
Confidence            45677888888888654 5578899999998888899999999999999999999998 667899999999999999999


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP  160 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~  160 (344)
                      ++++|++||+|+...                                  ...|+|++|...+++.++++++.++++.||+
T Consensus        95 ~vkgfk~Gd~VIp~~----------------------------------a~lGtW~t~~v~~e~~Li~vd~~~pl~~AAT  140 (354)
T KOG0025|consen   95 NVKGFKPGDWVIPLS----------------------------------ANLGTWRTEAVFSESDLIKVDKDIPLASAAT  140 (354)
T ss_pred             CcCccCCCCeEeecC----------------------------------CCCccceeeEeecccceEEcCCcCChhhhhe
Confidence            999999999997544                                  3458999999999999999999999999999


Q ss_pred             cchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCcEEEeCCCHH
Q 019199          161 LLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFVVSSDLE  236 (344)
Q Consensus       161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~~~v~~~~~~  236 (344)
                      +.++..|||++|.+--.+++||+|+-.|+ +++|++.+|+||++|++-+-+.|+....+++   ++.+||+++|..++..
T Consensus       141 ~~VNP~TAyrmL~dfv~L~~GD~vIQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel~  220 (354)
T KOG0025|consen  141 LSVNPCTAYRMLKDFVQLNKGDSVIQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEELR  220 (354)
T ss_pred             eccCchHHHHHHHHHHhcCCCCeeeecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHhc
Confidence            99999999999999999999999999998 9999999999999999887777765544333   4668999998765432


Q ss_pred             ---HHHH--hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee---------ee----------
Q 019199          237 ---QMKA--LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN---------IG----------  290 (344)
Q Consensus       237 ---~~~~--~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~---------~~----------  290 (344)
                         ....  ...++.+.|||+|+.. ...+.+.|.++|..+.+|..  ...+++...++         +.          
T Consensus       221 ~~~~~k~~~~~~~prLalNcVGGks-a~~iar~L~~GgtmvTYGGMSkqPv~~~ts~lIFKdl~~rGfWvt~W~~~~~~p  299 (354)
T KOG0025|consen  221 DRKMKKFKGDNPRPRLALNCVGGKS-ATEIARYLERGGTMVTYGGMSKQPVTVPTSLLIFKDLKLRGFWVTRWKKEHKSP  299 (354)
T ss_pred             chhhhhhhccCCCceEEEeccCchh-HHHHHHHHhcCceEEEecCccCCCcccccchheeccceeeeeeeeehhhccCCc
Confidence               1111  1357899999999987 88999999999999999866  55566655544         11          


Q ss_pred             --chHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCc-ceEEEEEe
Q 019199          291 --GTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDV-KYRFVIDI  339 (344)
Q Consensus       291 --~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~  339 (344)
                        ..+.++++.+|+..|+|+.+. +..++++-..|++...+... .||-+|.+
T Consensus       300 e~~~~~i~~~~~l~~~G~i~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~  352 (354)
T KOG0025|consen  300 EERKEMIDELCDLYRRGKLKAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL  352 (354)
T ss_pred             HHHHHHHHHHHHHHHcCeeccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence              114678889999999998765 78899999888886666433 36666654

>cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members

Probab=100.00  E-value=7.5e-38  Score=287.79  Aligned_cols=309  Identities=35%  Similarity=0.482  Sum_probs=259.6

Q ss_pred             ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCC
Q 019199           22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSC  100 (344)
Q Consensus        22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c  100 (344)
                      +.+.+.+.|.+.+++|+|++.++++|+.|.....|... ...+|.++|+|++|+|+++|++++.+++||+|+.++. .+|
T Consensus        14 ~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G~v~~~G~~v~~~~~Gd~V~~~~~-~~~   92 (338)
T cd08254          14 LVLEEVPVPEPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAGTVVEVGAGVTNFKVGDRVAVPAV-IPC   92 (338)
T ss_pred             eEEeccCCCCCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccEEEEEECCCCccCCCCCEEEECCC-CCC
Confidence            67788888999999999999999999999988877654 3345778999999999999999999999999988775 489


Q ss_pred             CCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCC
Q 019199          101 RDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP  180 (344)
Q Consensus       101 ~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~  180 (344)
                      +.|.+|..++.+.|....+.       |....|++++|+.++.+.++++|++++..+++.++..+.|||+++.....+++
T Consensus        93 ~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~ta~~~l~~~~~~~~  165 (338)
T cd08254          93 GACALCRRGRGNLCLNQGMP-------GLGIDGGFAEYIVVPARALVPVPDGVPFAQAAVATDAVLTPYHAVVRAGEVKP  165 (338)
T ss_pred             CCChhhhCcCcccCCCCCcc-------ccccCCcceeeEEechHHeEECCCCCCHHHhhhhcchHHHHHHHHHhccCCCC
Confidence            99999999999999654322       22346899999999999999999999999999999999999999988888899


Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-cCCccEEEECCCCch
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKSLDFIIDTASGDH  256 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~~~~dvvid~~g~~~  256 (344)
                      +++|||.|+|.+|++++++|+.+|++|++++.++++.+.+ +++|.+.+++..+...   +... .+++|+++|+++...
T Consensus       166 ~~~vli~g~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~D~vid~~g~~~  244 (338)
T cd08254         166 GETVLVIGLGGLGLNAVQIAKAMGAAVIAVDIKEEKLELA-KELGADEVLNSLDDSPKDKKAAGLGGGFDVIFDFVGTQP  244 (338)
T ss_pred             CCEEEEECCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCCCcCHHHHHHHhcCCCceEEEECCCCHH
Confidence            9999998889999999999999999999999999988888 6799888887665322   2122 367999999998776


Q ss_pred             hHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHHH
Q 019199          257 PFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALER  325 (344)
Q Consensus       257 ~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~~  325 (344)
                      .+..++++++++|+++.+|.. ....++...+.          ....+.++.+++++.++.+.+.++.++++++.++++.
T Consensus       245 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~a~~~  324 (338)
T cd08254         245 TFEDAQKAVKPGGRIVVVGLGRDKLTVDLSDLIARELRIIGSFGGTPEDLPEVLDLIAKGKLDPQVETRPLDEIPEVLER  324 (338)
T ss_pred             HHHHHHHHhhcCCEEEEECCCCCCCccCHHHHhhCccEEEEeccCCHHHHHHHHHHHHcCCCcccceeEcHHHHHHHHHH
Confidence            799999999999999999865 22222221111          1125678899999999999876789999999999999


Q ss_pred             HHcCCcceEEEEEe
Q 019199          326 LIKRDVKYRFVIDI  339 (344)
Q Consensus       326 ~~~~~~~gkvvi~~  339 (344)
                      +.+++..||+|+++
T Consensus       325 ~~~~~~~~kvv~~~  338 (338)
T cd08254         325 LHKGKVKGRVVLVP  338 (338)
T ss_pred             HHcCCccceEEEeC
Confidence            99999899999863

This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio

>cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.3e-38  Score=290.89  Aligned_cols=324  Identities=27%  Similarity=0.459  Sum_probs=262.0

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC---CCCC
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR---FKVG   88 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~---~~~G   88 (344)
                      +|+.......+++.+.+.|.+.++||+||+.++++|++|+....+..+ ..+|.++|||++|+|+.+|+++++   |++|
T Consensus         3 a~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~-~~~p~~~g~e~~G~v~~vG~~~~~~~~~~~G   81 (367)
T cd08263           3 AAVLKGPNPPLTIEEIPVPRPKEGEILIRVAACGVCHSDLHVLKGELP-FPPPFVLGHEISGEVVEVGPNVENPYGLSVG   81 (367)
T ss_pred             eEEEecCCCCcEEEEeeCCCCCCCeEEEEEEEeeeCcchHHHhcCCCC-CCCCcccccccceEEEEeCCCCCCCCcCCCC
Confidence            455544445678889999999999999999999999999988877664 356789999999999999999988   9999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCcccc-cc-ccccCCC-------------CccCCcceeEEEEecceEEEcCCCC
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVY-TF-NAIDADG-------------TITKGGYSSYIVVHERYCYKIANDY  153 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~-~~-~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~P~~~  153 (344)
                      |+|+..+.. .|+.|.+|..+..++|+++.+ .. ++..+.|             ....|++++|+.++.+.++++|+++
T Consensus        82 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~i  160 (367)
T cd08263          82 DRVVGSFIM-PCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVVPATALAPLPESL  160 (367)
T ss_pred             CEEEEcCCC-CCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEechhhEEECCCCC
Confidence            999875443 899999999999999998641 11 1000100             0235899999999999999999999


Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      +..+++.+++.+.|||+++.....++++++|||+|+|.+|++++++|+.+|++ |++++.++++.+.+ +++|++.+++.
T Consensus       161 s~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g~g~vG~~~~~lak~~G~~~vi~~~~s~~~~~~~-~~~g~~~v~~~  239 (367)
T cd08263         161 DYTESAVLGCAGFTAYGALKHAADVRPGETVAVIGVGGVGSSAIQLAKAFGASPIIAVDVRDEKLAKA-KELGATHTVNA  239 (367)
T ss_pred             CHHHHhHhcchHHHHHHHHHhcccCCCCCEEEEECCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCceEecC
Confidence            99999999999999999998888779999999998899999999999999997 88888888888777 68999999987


Q ss_pred             CCHHHH---HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCcee-----e-e-----echH
Q 019199          233 SDLEQM---KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASL-----N-I-----GGTK  293 (344)
Q Consensus       233 ~~~~~~---~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~-----~-~-----~~~~  293 (344)
                      +..+..   .+.  .+++|++||++++......++++++++|+++.+|...   ...+....+     . .     ...+
T Consensus       240 ~~~~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  319 (367)
T cd08263         240 AKEDAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGGATAEIPITRLVRRGIKIIGSYGARPRQ  319 (367)
T ss_pred             CcccHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCCCccccCHHHHhhCCeEEEecCCCCcHH
Confidence            654332   222  2579999999998745899999999999999998641   122221111     0 1     1136


Q ss_pred             hHHHHHHHHHhCCCccc---eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          294 DTQEMLEYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       294 ~~~~~~~~~~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .++++++++.++.+++.   .+.|+++++.++++.+.+++..||+||+
T Consensus       320 ~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~  367 (367)
T cd08263         320 DLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE  367 (367)
T ss_pred             HHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence            78999999999999763   4789999999999999999888999974

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu

>PRK05396 tdh L-threonine 3-dehydrogenase; Validated

Probab=100.00  E-value=8.7e-38  Score=287.97  Aligned_cols=317  Identities=22%  Similarity=0.345  Sum_probs=248.6

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC---CCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++|...++++.+++.+.+.|.|+++||+||+.++++|++|+.++.+..   ....+|.++|||++|+|+++|++++.|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~V~~vG~~v~~~~~   81 (341)
T PRK05396          2 KALVKLKAEPGLWLTDVPVPEPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVGEVVEVGSEVTGFKV   81 (341)
T ss_pred             ceEEEecCCCceEEEECCCCCCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEEEEEEeCCCCCcCCC
Confidence            355555566779999999999999999999999999999998765532   12346778999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+..+.+ .|++|.+|..+.+++|++..+.       +....|+|++|+.++.+.++++|+++++.+++.+ ..+.+
T Consensus        82 Gd~V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~iP~~l~~~~~~~~-~~~~~  152 (341)
T PRK05396         82 GDRVSGEGHI-VCGHCRNCRAGRRHLCRNTKGV-------GVNRPGAFAEYLVIPAFNVWKIPDDIPDDLAAIF-DPFGN  152 (341)
T ss_pred             CCEEEECCCC-CCCCChhhhCcChhhCCCccee-------eecCCCcceeeEEechHHeEECcCCCCHHHhHhh-hHHHH
Confidence            9999887655 7999999999999999874221       1224689999999999999999999999888744 45555


Q ss_pred             hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc-
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG-  242 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~-  242 (344)
                      ++.++.. . ..+|++|+|.|+|.+|++++++|+.+|+ +|++++.++++.+.+ +++|++.+++.++.+.   +.+.. 
T Consensus       153 ~~~~~~~-~-~~~g~~vlV~~~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~lg~~~~~~~~~~~~~~~~~~~~~  229 (341)
T PRK05396        153 AVHTALS-F-DLVGEDVLITGAGPIGIMAAAVAKHVGARHVVITDVNEYRLELA-RKMGATRAVNVAKEDLRDVMAELGM  229 (341)
T ss_pred             HHHHHHc-C-CCCCCeEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCcEEecCccccHHHHHHHhcC
Confidence            5555433 2 3689999998889999999999999999 688887777777766 6899999888765433   33332 


Q ss_pred             -CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee------ee-----chHhHHHHHHHHHhC-CCc
Q 019199          243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------IG-----GTKDTQEMLEYCAAH-KIY  308 (344)
Q Consensus       243 -~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~~-----~~~~~~~~~~~~~~g-~~~  308 (344)
                       +++|++||+.|+...+..++++++++|+++.+|.. ....++...+.      .+     ..+.+..+++++.++ ++.
T Consensus       230 ~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~  309 (341)
T PRK05396        230 TEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGDMAIDWNKVIFKGLTIKGIYGREMFETWYKMSALLQSGLDLS  309 (341)
T ss_pred             CCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCcccHHHHhhcceEEEEEEccCccchHHHHHHHHHcCCChh
Confidence             67999999999877799999999999999999865 22221111110      11     123456788899888 454


Q ss_pred             cc-eEEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          309 PQ-IETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       309 ~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      +. .+.|+++++.++++.+.+++ .||++++++
T Consensus       310 ~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~  341 (341)
T PRK05396        310 PIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD  341 (341)
T ss_pred             HheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence            44 48999999999999998877 799999764

>cd08293 PTGR2 Prostaglandin reductase

Probab=100.00  E-value=5.5e-38  Score=289.72  Aligned_cols=283  Identities=16%  Similarity=0.146  Sum_probs=223.9

Q ss_pred             CCCccceeeccCCCC-CCcEEEEEeeeecccchhhhhcCC---CCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199           19 SGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNK---HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG   94 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~---~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~   94 (344)
                      ++.+++.+.+.|+|. +|||||||.|+|||+.|.......   .....+|.++|||++|+|+++|+++++|++||+|+..
T Consensus        20 ~~~~~~~~~~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~   99 (345)
T cd08293          20 AENFRVEECTLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSF   99 (345)
T ss_pred             ccceEEEeccCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeEEEEEeccCCCCCCCCCEEEec
Confidence            345777888999875 999999999999999996443211   1123467889999999999999999999999999631


Q ss_pred             ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccc----ccccchhhhHhHH
Q 019199           95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL----AAPLLCAGITVYT  170 (344)
Q Consensus        95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~----aa~l~~~~~ta~~  170 (344)
                                                           .++|+||+.++++.++++|+++++.+    +++++.++.|||+
T Consensus       100 -------------------------------------~~~~ae~~~v~~~~~~~iP~~~~~~~~~~~~a~~~~~~~ta~~  142 (345)
T cd08293         100 -------------------------------------NWPWQTYAVLDGSSLEKVDPQLVDGHLSYFLGAVGLPGLTALI  142 (345)
T ss_pred             -------------------------------------CCCceeEEEecHHHeEEcCccccccchhHHhhhcCcHHHHHHH
Confidence                                                 14699999999999999999865433    4567788999999


Q ss_pred             HHHhccCCCCC--CEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-c
Q 019199          171 PMMRHKMNQPG--KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-G  242 (344)
Q Consensus       171 ~l~~~~~~~~g--~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~  242 (344)
                      ++.+...+++|  ++|||+|+ |++|++++|+|+++|+ +|+++++++++.+.+.+++|+++++++.+.+.   +.+. .
T Consensus       143 al~~~~~~~~g~~~~VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~~~~~~i~~~~~  222 (345)
T cd08293         143 GIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTDNVAERLRELCP  222 (345)
T ss_pred             HHHHhccCCCCCCCEEEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHCC
Confidence            98777766776  99999998 9999999999999999 89999999998888855599999998876433   3333 3


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC----Cccc----cC--------Cceee---e--ec-----hHhHH
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP----SKVK----FS--------PASLN---I--GG-----TKDTQ  296 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~----~~--------~~~~~---~--~~-----~~~~~  296 (344)
                      +++|++||++|+.. +..++++++++|+++.+|..    ....    +.        ...+.   .  ..     .+.++
T Consensus       223 ~gvd~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  301 (345)
T cd08293         223 EGVDVYFDNVGGEI-SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIA  301 (345)
T ss_pred             CCceEEEECCCcHH-HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHH
Confidence            68999999999876 89999999999999999842    1111    10        00000   0  11     13467


Q ss_pred             HHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          297 EMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       297 ~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++++++.++.+++.. ..|+++++++|++.+.+++..||+|+++
T Consensus       302 ~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvl~~  345 (345)
T cd08293         302 QLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV  345 (345)
T ss_pred             HHHHHHHCCCccceeEEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence            788999999998765 5669999999999999998889999875

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid

>PLN03154 putative allyl alcohol dehydrogenase; Provisional

Probab=100.00  E-value=6.8e-38  Score=288.91  Aligned_cols=284  Identities=22%  Similarity=0.229  Sum_probs=226.7

Q ss_pred             CCccceee---ccCC-CCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCccc--ccceEEEEecCCCCCCCCCCEEEE
Q 019199           20 GVLSPYSF---NRRA-VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH--EIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        20 ~~~~~~~~---~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~--e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      +.|++.+.   +.|. +++||||||+.|+++|+.|.....+.......|.++|+  |++|+|..+|+++++|++||+|+.
T Consensus        25 ~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v~~vg~~v~~~~~Gd~V~~  104 (348)
T PLN03154         25 TDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISG  104 (348)
T ss_pred             ccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEEEEEecCCCCCCCCCEEEe
Confidence            44666553   4453 58999999999999999987654332222235788998  889999999999999999999952


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce--EEE--cCCCCCcc-cccccchhhhHh
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYK--IANDYPLA-LAAPLLCAGITV  168 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~--~P~~~~~~-~aa~l~~~~~ta  168 (344)
                                                            .|+|+||..++...  +++  +|+++++. +++++++++.||
T Consensus       105 --------------------------------------~~~~aey~~v~~~~~~~~~~~~P~~~~~~~~aa~l~~~~~TA  146 (348)
T PLN03154        105 --------------------------------------ITGWEEYSLIRSSDNQLRKIQLQDDIPLSYHLGLLGMAGFTA  146 (348)
T ss_pred             --------------------------------------cCCcEEEEEEeccccceEEccCcCCCCHHHHHHHcccHHHHH
Confidence                                                  25799999998753  544  58999986 688999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-H---HHHHh-c
Q 019199          169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-E---QMKAL-G  242 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~---~~~~~-~  242 (344)
                      |+++.....+++|++|||+|+ |++|++++|+||.+|++|+++++++++.+.+++++|+++++++.+. +   .+.+. .
T Consensus       147 ~~al~~~~~~~~g~~VlV~GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~  226 (348)
T PLN03154        147 YAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFP  226 (348)
T ss_pred             HHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCC
Confidence            999987777799999999998 9999999999999999999999998888887447999999987642 2   22333 3


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccc-----cCCceee------ee---------chHhHHHHHH
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVK-----FSPASLN------IG---------GTKDTQEMLE  300 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~-----~~~~~~~------~~---------~~~~~~~~~~  300 (344)
                      +++|++||++|+. .+..++++++++|+++.+|...  ...     ++...+.      .+         ..+.++++++
T Consensus       227 ~gvD~v~d~vG~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~  305 (348)
T PLN03154        227 EGIDIYFDNVGGD-MLDAALLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSR  305 (348)
T ss_pred             CCcEEEEECCCHH-HHHHHHHHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHH
Confidence            5799999999986 5999999999999999999752  111     1111111      11         1245788999


Q ss_pred             HHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          301 YCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       301 ~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      ++++|++++.+ .+|+|+++++|++.+.+++..||+||++.++
T Consensus       306 l~~~G~l~~~~~~~~~L~~~~~A~~~l~~g~~~GKvVl~~~~~  348 (348)
T PLN03154        306 YYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE  348 (348)
T ss_pred             HHHCCCccCceecccCHHHHHHHHHHHHcCCCCceEEEEecCC
Confidence            99999999877 6899999999999999999999999998653

>cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2

Probab=100.00  E-value=1.3e-37  Score=287.17  Aligned_cols=317  Identities=25%  Similarity=0.338  Sum_probs=254.0

Q ss_pred             eeeecCCCCCccceeeccCCCC-CCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +|+.. ++..++++++++|+|. ++||+||+.++++|+.|+....|..+ ..+|.++|||++|+|+++|++++++++||+
T Consensus         3 a~~~~-~~~~~~~~~~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (344)
T cd08284           3 AVVFK-GPGDVRVEEVPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVGEVVEVGPEVRTLKVGDR   80 (344)
T ss_pred             eEEEe-cCCCceEEeccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEEEEEeeCCCccccCCCCE
Confidence            55554 3467889999999985 99999999999999999988877654 345788999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhHh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+..+.. .|++|.+|.++..+.|++..+.  +.. ......|++++|+.++++  .++++|+++++.+++++++.+.||
T Consensus        81 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~~-~~~~~~g~~~~~~~v~~~~~~~~~~p~~l~~~~a~~l~~~~~ta  156 (344)
T cd08284          81 VVSPFTI-ACGECFYCRRGQSGRCAKGGLF--GYA-GSPNLDGAQAEYVRVPFADGTLLKLPDGLSDEAALLLGDILPTG  156 (344)
T ss_pred             EEEcccC-CCCCChHHhCcCcccCCCCccc--ccc-ccCCCCCceeEEEEcccccCceEECCCCCCHHHhhhhcCchHHH
Confidence            9887654 7999999999999999764221  000 011235899999999965  999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH---HHHHhc--
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKALG--  242 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~~--  242 (344)
                      |+++.. ..+.+|++|||+|+|.+|++++++|+.+|+ +|+++++.+++...+ +++|+. .++.+..+   .+.+..  
T Consensus       157 ~~~~~~-~~~~~~~~vlI~g~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~-~~~g~~-~~~~~~~~~~~~l~~~~~~  233 (344)
T cd08284         157 YFGAKR-AQVRPGDTVAVIGCGPVGLCAVLSAQVLGAARVFAVDPVPERLERA-AALGAE-PINFEDAEPVERVREATEG  233 (344)
T ss_pred             HhhhHh-cCCccCCEEEEECCcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHhCCe-EEecCCcCHHHHHHHHhCC
Confidence            999976 456899999999889999999999999997 899997777777776 679975 35554432   233332  


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc-------eee---eechHhHHHHHHHHHhCCCcc-
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYP-  309 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~-  309 (344)
                      +++|++||++++...+..++++++++|+++.+|...  .......       .+.   ....+.++++++++.++.+++ 
T Consensus       234 ~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~  313 (344)
T cd08284         234 RGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAEEFPFPGLDAYNKNLTLRFGRCPVRSLFPELLPLLESGRLDLE  313 (344)
T ss_pred             CCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCCCccccHHHHhhcCcEEEEecCCcchhHHHHHHHHHcCCCChH
Confidence            579999999997666999999999999999998652  1111111       111   223467899999999999975 


Q ss_pred             --ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          310 --QIETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       310 --~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                        ..+.|++++++++++.+.+++. +|+|++
T Consensus       314 ~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~  343 (344)
T cd08284         314 FLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD  343 (344)
T ss_pred             HhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence              3488999999999999988877 999874

Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical

>cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH)

Probab=100.00  E-value=4.2e-37  Score=286.79  Aligned_cols=320  Identities=23%  Similarity=0.253  Sum_probs=252.6

Q ss_pred             eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +|+.. .++.+++++++.|.+ .++||+||+.++++|++|++.+.|..+ ..+|.++|||++|+|+++|++++.+++||+
T Consensus         3 ~~~~~-~~~~~~~~~~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (375)
T cd08282           3 AVVYG-GPGNVAVEDVPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMGEVEEVGSAVESLKVGDR   80 (375)
T ss_pred             eEEEe-cCCceeEEeCCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEEEEEEeCCCCCcCCCCCE
Confidence            44443 456788999999996 899999999999999999999888665 346889999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCcccccccc--ccCC-CCccCCcceeEEEEecc--eEEEcCCCCCcc---cccccc
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA--IDAD-GTITKGGYSSYIVVHER--YCYKIANDYPLA---LAAPLL  162 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~--~~~~-~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~---~aa~l~  162 (344)
                      |+..+. ..|+.|..|..+..+.|.+..+.+.+  .+.. .....|+|++|+.++..  .++++|+++++.   +++.++
T Consensus        81 V~~~~~-~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~lP~~~~~~~~~~~a~~~  159 (375)
T cd08282          81 VVVPFN-VACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKLPDRDGAKEKDDYLMLS  159 (375)
T ss_pred             EEEeCC-CCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEECCCCCChhhhhheeeec
Confidence            977654 47999999999999999864322111  0100 11235899999999975  899999999998   567888


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---H
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---M  238 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~  238 (344)
                      +.+.|||+++ ....+++|++|+|.|+|.+|++++++|+++|+ +|+++++++++.+.+ +++|++ .++.++.+.   +
T Consensus       160 ~~~~ta~~a~-~~~~~~~g~~vlI~g~g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~-~~~g~~-~v~~~~~~~~~~i  236 (375)
T cd08282         160 DIFPTGWHGL-ELAGVQPGDTVAVFGAGPVGLMAAYSAILRGASRVYVVDHVPERLDLA-ESIGAI-PIDFSDGDPVEQI  236 (375)
T ss_pred             chHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCe-EeccCcccHHHHH
Confidence            8999999998 55566999999999889999999999999998 799988888888777 689984 466654333   2


Q ss_pred             HHh-cCCccEEEECCCCch-----------hHHHHHHhcccCCEEEEEcCCC--cc------------ccCCceee----
Q 019199          239 KAL-GKSLDFIIDTASGDH-----------PFDAYMSLLKVAGVYVLVGFPS--KV------------KFSPASLN----  288 (344)
Q Consensus       239 ~~~-~~~~dvvid~~g~~~-----------~~~~~~~~l~~~G~iv~~g~~~--~~------------~~~~~~~~----  288 (344)
                      .+. .+++|+++|++|+..           ++..++++++++|+++.+|...  ..            .++...+.    
T Consensus       237 ~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  316 (375)
T cd08282         237 LGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQGELSFDFGLLWAKGL  316 (375)
T ss_pred             HHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCccccccHHHHHhcCc
Confidence            222 257999999999763           4889999999999999887641  11            01100000    


Q ss_pred             ------eechHhHHHHHHHHHhCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          289 ------IGGTKDTQEMLEYCAAHKIYP---QIETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       289 ------~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                            ....+.++++++++.++++.+   .+++|++++++++++.+.+++ .+|+|+.
T Consensus       317 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~  374 (375)
T cd08282         317 SFGTGQAPVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK  374 (375)
T ss_pred             EEEEecCCchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence                  113356788999999999986   358999999999999999988 8999875

Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo

>cd08232 idonate-5-DH L-idonate 5-dehydrogenase

Probab=100.00  E-value=2.2e-37  Score=285.01  Aligned_cols=315  Identities=21%  Similarity=0.354  Sum_probs=251.8

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhc-CCCC--CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR-NKHG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG   94 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~-g~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~   94 (344)
                      +++.+++++.+.|+++++||+||+.++++|++|+.... +..+  ....|.++|||++|+|+++|+++++|++||+|+..
T Consensus         5 ~~~~~~~~~~~~p~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~   84 (339)
T cd08232           5 AAGDLRVEERPAPEPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSGVVEAVGPGVTGLAPGQRVAVN   84 (339)
T ss_pred             cCCceEEEEcCCCCCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceEEEEeeCCCCCcCCCCCEEEEc
Confidence            56788999999999999999999999999999987663 3221  12457789999999999999999999999999876


Q ss_pred             ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199           95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR  174 (344)
Q Consensus        95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  174 (344)
                      +.+ .|++|.+|..|+.+.|.+..+ +.... .-....|+|++|+.++++.++++|++++..+|+. ..++.+||+++..
T Consensus        85 ~~~-~~~~~~~~~~g~~~~~~~~~~-~~~~~-~~~~~~g~~~~~v~v~~~~~~~iP~~~~~~~aa~-~~~~~~a~~~l~~  160 (339)
T cd08232          85 PSR-PCGTCDYCRAGRPNLCLNMRF-LGSAM-RFPHVQGGFREYLVVDASQCVPLPDGLSLRRAAL-AEPLAVALHAVNR  160 (339)
T ss_pred             cCC-cCCCChHHhCcCcccCccccc-eeecc-ccCCCCCceeeEEEechHHeEECcCCCCHHHhhh-cchHHHHHHHHHh
Confidence            554 799999999999999997421 11000 0012468999999999999999999999999875 5678899999988


Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCccEEEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLDFIID  250 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~dvvid  250 (344)
                      ...+ ++++|||.|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.++.. ..+.   .+++|+++|
T Consensus       161 ~~~~-~~~~VLI~g~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~-~~~g~~~vi~~~~~~-~~~~~~~~~~vd~vld  237 (339)
T cd08232         161 AGDL-AGKRVLVTGAGPIGALVVAAARRAGAAEIVATDLADAPLAVA-RAMGADETVNLARDP-LAAYAADKGDFDVVFE  237 (339)
T ss_pred             cCCC-CCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCCEEEcCCchh-hhhhhccCCCccEEEE
Confidence            8775 99999998889999999999999999 888988888877765 688999988876543 2222   246999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCc-------eee--eechHhHHHHHHHHHhCCCcc---ceEEEeCc
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPA-------SLN--IGGTKDTQEMLEYCAAHKIYP---QIETIPIE  317 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~-------~~~--~~~~~~~~~~~~~~~~g~~~~---~~~~~~~~  317 (344)
                      +.++...+..++++|+++|+++.+|... ....+..       .+.  ....+.++++++++.++.+++   ..++|+++
T Consensus       238 ~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~  317 (339)
T cd08232         238 ASGAPAALASALRVVRPGGTVVQVGMLGGPVPLPLNALVAKELDLRGSFRFDDEFAEAVRLLAAGRIDVRPLITAVFPLE  317 (339)
T ss_pred             CCCCHHHHHHHHHHHhcCCEEEEEecCCCCccCcHHHHhhcceEEEEEecCHHHHHHHHHHHHcCCCCchhheeEEecHH
Confidence            9997656899999999999999998542 1111111       111  223467889999999998864   23789999


Q ss_pred             cHHHHHHHHHcCCcceEEEEEe
Q 019199          318 NVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       318 ~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +++++++.+.+++..||+|+++
T Consensus       318 ~~~~a~~~~~~~~~~gkvvv~~  339 (339)
T cd08232         318 EAAEAFALAADRTRSVKVQLSF  339 (339)
T ss_pred             HHHHHHHHHHhCCCceeEEEeC
Confidence            9999999999888889999863

L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai

>cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.1e-37  Score=282.94  Aligned_cols=315  Identities=31%  Similarity=0.485  Sum_probs=259.6

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      +++...+++.+.+++++.|.+.+++|+|++.++++|++|+....|..+....|.++|||++|+|+++|++++.|++||+|
T Consensus         3 a~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V   82 (332)
T cd08259           3 AAILHKPNKPLQIEEVPDPEPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVGTVEEVGEGVERFKPGDRV   82 (332)
T ss_pred             EEEEecCCCceEEEEccCCCCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceEEEEEECCCCccCCCCCEE
Confidence            44443345678888999999999999999999999999999888866555667899999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      +..+.. .|+.|.+|..+..+.|.+.  ...     |....|++++|+.++...++++|+++++.+++.+++.+.|||++
T Consensus        83 ~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~-----~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~  154 (332)
T cd08259          83 ILYYYI-PCGKCEYCLSGEENLCRNR--AEY-----GEEVDGGFAEYVKVPERSLVKLPDNVSDESAALAACVVGTAVHA  154 (332)
T ss_pred             EECCCC-CCcCChhhhCCCcccCCCc--ccc-----ccccCCeeeeEEEechhheEECCCCCCHHHHhhhccHHHHHHHH
Confidence            876544 6999999999999999874  111     22346899999999999999999999999999999999999999


Q ss_pred             HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHhcCCccEEE
Q 019199          172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFII  249 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~dvvi  249 (344)
                      +.. ..+++++++||+|+ |.+|++++++++..|++|+++++++++.+.+ +.+|.+.+++..+. +.+.+. .++|+++
T Consensus       155 l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~d~v~  231 (332)
T cd08259         155 LKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKIL-KELGADYVIDGSKFSEDVKKL-GGADVVI  231 (332)
T ss_pred             HHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HHcCCcEEEecHHHHHHHHhc-cCCCEEE
Confidence            987 66799999999997 9999999999999999999999888888777 67888777765431 122222 3799999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccC-------Cceee---eechHhHHHHHHHHHhCCCccce-EEEeC
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFS-------PASLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIPI  316 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~-------~~~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~~  316 (344)
                      +++|... ...++++++++|+++.+|.. .. ..+.       ...+.   ....+.++++++++.++.+++.+ ++|++
T Consensus       232 ~~~g~~~-~~~~~~~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~  310 (332)
T cd08259         232 ELVGSPT-IEESLRSLNKGGRLVLIGNVTPDPAPLRPGLLILKEIRIIGSISATKADVEEALKLVKEGKIKPVIDRVVSL  310 (332)
T ss_pred             ECCChHH-HHHHHHHhhcCCEEEEEcCCCCCCcCCCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCccceeEEEcH
Confidence            9999876 89999999999999999864 11 1111       00111   22356788999999999998755 89999


Q ss_pred             ccHHHHHHHHHcCCcceEEEEE
Q 019199          317 ENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       317 ~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++++++++.+.+++..||++++
T Consensus       311 ~~~~~a~~~~~~~~~~~kvv~~  332 (332)
T cd08259         311 EDINEALEDLKSGKVVGRIVLK  332 (332)
T ss_pred             HHHHHHHHHHHcCCcccEEEeC
Confidence            9999999999998888999863

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES.

>cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=3.4e-37  Score=283.60  Aligned_cols=309  Identities=26%  Similarity=0.423  Sum_probs=252.2

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      ++.+.+.+++.|++.++||+||+.++++|+.|+....+..+...+|.++|+|++|+|+++|++++.|++||+|+..+.. 
T Consensus         9 ~~~~~~~~~~~~~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~Gd~V~~~~~~-   87 (337)
T cd08261           9 PGRLEVVDIPEPVPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSGEVVEVGEGVAGLKVGDRVVVDPYI-   87 (337)
T ss_pred             CCceEEEECCCCCCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEEEEEEeCCCCCCCCCCCEEEECCCC-
Confidence            4568888999999999999999999999999998887766544567889999999999999999999999999876544 


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (344)
                      .|+.|..|+.+.++.|.+...  .     +....|+|++|+.++++ ++++|+++++.+++.+ ..+.++++++ ....+
T Consensus        88 ~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~v~v~~~-~~~~p~~~~~~~aa~~-~~~~~a~~~~-~~~~l  157 (337)
T cd08261          88 SCGECYACRKGRPNCCENLQV--L-----GVHRDGGFAEYIVVPAD-ALLVPEGLSLDQAALV-EPLAIGAHAV-RRAGV  157 (337)
T ss_pred             CCCCChhhhCcCcccCCCCCe--e-----eecCCCcceeEEEechh-eEECCCCCCHHHhhhh-chHHHHHHHH-HhcCC
Confidence            899999999999999954211  0     11235899999999999 9999999999999876 4677888887 55667


Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvid~~g  253 (344)
                      ++|++|||+|+|.+|++++++|+.+|++|+++.+++++.+.+ +++|++++++..+.+.   +.+..  +++|+++|++|
T Consensus       158 ~~g~~vLI~g~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~-~~~g~~~v~~~~~~~~~~~l~~~~~~~~vd~vld~~g  236 (337)
T cd08261         158 TAGDTVLVVGAGPIGLGVIQVAKARGARVIVVDIDDERLEFA-RELGADDTINVGDEDVAARLRELTDGEGADVVIDATG  236 (337)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHcCCeEEEECCCHHHHHHH-HHhCCCEEecCcccCHHHHHHHHhCCCCCCEEEECCC
Confidence            999999999889999999999999999999998888888877 6899999998776432   33332  46999999998


Q ss_pred             CchhHHHHHHhcccCCEEEEEcCC-CccccCCc-------eee---eechHhHHHHHHHHHhCCCcc--c-eEEEeCccH
Q 019199          254 GDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYP--Q-IETIPIENV  319 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~--~-~~~~~~~~~  319 (344)
                      +...+..++++++++|+++.+|.. ....++..       .+.   ....+.++++++++.++.+++  . +.+|+++++
T Consensus       237 ~~~~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~i~~~~~~~~~~~~~~~  316 (337)
T cd08261         237 NPASMEEAVELVAHGGRVVLVGLSKGPVTFPDPEFHKKELTILGSRNATREDFPDVIDLLESGKVDPEALITHRFPFEDV  316 (337)
T ss_pred             CHHHHHHHHHHHhcCCEEEEEcCCCCCCccCHHHHHhCCCEEEEeccCChhhHHHHHHHHHcCCCChhhheEEEeeHHHH
Confidence            766689999999999999999855 21111111       111   122357888999999999986  4 488999999


Q ss_pred             HHHHHHHHcCC-cceEEEEEe
Q 019199          320 NEALERLIKRD-VKYRFVIDI  339 (344)
Q Consensus       320 ~~a~~~~~~~~-~~gkvvi~~  339 (344)
                      .++++.+.+++ ..+|+|+++
T Consensus       317 ~~a~~~~~~~~~~~~k~v~~~  337 (337)
T cd08261         317 PEAFDLWEAPPGGVIKVLIEF  337 (337)
T ss_pred             HHHHHHHhcCCCceEEEEEeC
Confidence            99999999884 679999864

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase,

>cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-37  Score=289.71  Aligned_cols=306  Identities=23%  Similarity=0.392  Sum_probs=243.9

Q ss_pred             CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC------C-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199           21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH------G-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~------~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      .+++++++.|++++++|+||+.++++|++|+..+.+..      + ...+|.++|||++|+|+++|++++.|++||+|++
T Consensus        38 ~~~~~~~~~p~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~  117 (384)
T cd08265          38 ELRVEDVPVPNLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSGVVEKTGKNVKNFEKGDPVTA  117 (384)
T ss_pred             CEEEEECCCCCCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEEEEEEECCCCCCCCCCCEEEE
Confidence            58899999999999999999999999999988775321      1 1345789999999999999999999999999988


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCC-------Ccccccccchhhh
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY-------PLALAAPLLCAGI  166 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~-------~~~~aa~l~~~~~  166 (344)
                      .+. .+|+.|..|..|.++.|.....  .++     ...|+|++|+.++++.++++|+++       +.. +++++.++.
T Consensus       118 ~~~-~~~~~~~~c~~~~~~~~~~~~~--~g~-----~~~g~~~~~v~v~~~~~~~lP~~~~~~~~~~~~~-~a~~~~~~~  188 (384)
T cd08265         118 EEM-MWCGMCRACRSGSPNHCKNLKE--LGF-----SADGAFAEYIAVNARYAWEINELREIYSEDKAFE-AGALVEPTS  188 (384)
T ss_pred             CCC-CCCCCChhhhCcCcccCCCcce--eee-----cCCCcceeeEEechHHeEECCccccccccCCCHH-HhhhhhHHH
Confidence            765 4899999999999999986432  111     235899999999999999999864       344 556777889


Q ss_pred             HhHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCH---H---HH
Q 019199          167 TVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDL---E---QM  238 (344)
Q Consensus       167 ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---~---~~  238 (344)
                      +||+++... ..+++|++|+|+|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.++.   +   .+
T Consensus       189 ta~~al~~~~~~~~~g~~VlV~g~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~~~~v  267 (384)
T cd08265         189 VAYNGLFIRGGGFRPGAYVVVYGAGPIGLAAIALAKAAGASKVIAFEISEERRNLA-KEMGADYVFNPTKMRDCLSGEKV  267 (384)
T ss_pred             HHHHHHHhhcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEEcccccccccHHHHH
Confidence            999998655 567999999999889999999999999999 799998888877776 68999988876632   2   22


Q ss_pred             HHhc--CCccEEEECCCCc-hhHHHHHHhcccCCEEEEEcCC-CccccCCceee------e-----echHhHHHHHHHHH
Q 019199          239 KALG--KSLDFIIDTASGD-HPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------I-----GGTKDTQEMLEYCA  303 (344)
Q Consensus       239 ~~~~--~~~dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~-----~~~~~~~~~~~~~~  303 (344)
                      .+..  +++|+++|++|.. ..+..++++++++|+++.+|.. ....+....+.      .     .....++++++++.
T Consensus       268 ~~~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ll~  347 (384)
T cd08265         268 MEVTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATTVPLHLEVLQVRRAQIVGAQGHSGHGIFPSVIKLMA  347 (384)
T ss_pred             HHhcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCCCcccHHHHhhCceEEEEeeccCCcchHHHHHHHHH
Confidence            3332  5799999999874 3588999999999999999865 22221111110      1     12346899999999


Q ss_pred             hCCCcc---ceEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          304 AHKIYP---QIETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       304 ~g~~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      ++.+++   .++.|+++++++|++.+.++ ..+|+|+
T Consensus       348 ~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv  383 (384)
T cd08265         348 SGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI  383 (384)
T ss_pred             cCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence            999975   34889999999999997655 4788886

This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi

>cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=2.1e-37  Score=283.52  Aligned_cols=300  Identities=29%  Similarity=0.429  Sum_probs=242.2

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      .+.+++++.+.|++.++||+||+.++++|++|+....+. ....+|.++|||++|+|+++|++++.|++||+|+..+.. 
T Consensus        11 ~~~~~~~~~~~~~~~~~ev~v~v~~~~i~~~d~~~~~~~-~~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~V~~~~~~-   88 (325)
T cd08264          11 IENLKVEDVKDPKPGPGEVLIRVKMAGVNPVDYNVINAV-KVKPMPHIPGAEFAGVVEEVGDHVKGVKKGDRVVVYNRV-   88 (325)
T ss_pred             CCceEEEeccCCCCCCCeEEEEEEEEEechHHHHHHhCC-CCCCCCeecccceeEEEEEECCCCCCCCCCCEEEECCCc-
Confidence            356778888888899999999999999999998877542 222357789999999999999999999999999887655 


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (344)
                      .|++|.+|..|..+.|.+..+.       +....|+|++|+.++++.++++|+++++.+++.+++.+.+||+++.. ..+
T Consensus        89 ~~~~c~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~-~~~  160 (325)
T cd08264          89 FDGTCDMCLSGNEMLCRNGGII-------GVVSNGGYAEYIVVPEKNLFKIPDSISDELAASLPVAALTAYHALKT-AGL  160 (325)
T ss_pred             CCCCChhhcCCCccccCcccee-------eccCCCceeeEEEcCHHHceeCCCCCCHHHhhhhhhhhHHHHHHHHh-cCC
Confidence            7999999999999999874321       11245899999999999999999999999999999999999999876 566


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHhcCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~~~~~dvvid~~g~~~  256 (344)
                      ++|++|+|+|+ |.+|++++++|+.+|++|+++++    .+.+ +++|++++++.++. +.+.+..+++|+++|++|+. 
T Consensus       161 ~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~-~~~g~~~~~~~~~~~~~l~~~~~~~d~vl~~~g~~-  234 (325)
T cd08264         161 GPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWL-KEFGADEVVDYDEVEEKVKEITKMADVVINSLGSS-  234 (325)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHH-HHhCCCeeecchHHHHHHHHHhCCCCEEEECCCHH-
Confidence            99999999998 99999999999999999988763    3555 67899888876542 22333347899999999986 


Q ss_pred             hHHHHHHhcccCCEEEEEcCC--CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccHHHHHH
Q 019199          257 PFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALE  324 (344)
Q Consensus       257 ~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~a~~  324 (344)
                      .+..++++++++|+++.+|..  ....++...+.          .+.++.++++++++...++ ...+.|+++++++|++
T Consensus       235 ~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-~~~~~~~~~~~~~a~~  313 (325)
T cd08264         235 FWDLSLSVLGRGGRLVTFGTLTGGEVKLDLSDLYSKQISIIGSTGGTRKELLELVKIAKDLKV-KVWKTFKLEEAKEALK  313 (325)
T ss_pred             HHHHHHHhhccCCEEEEEecCCCCCCccCHHHHhhcCcEEEEccCCCHHHHHHHHHHHHcCCc-eeEEEEcHHHHHHHHH
Confidence            499999999999999999864  12222211111          1234678899999964442 2348899999999999


Q ss_pred             HHHcCCcceEE
Q 019199          325 RLIKRDVKYRF  335 (344)
Q Consensus       325 ~~~~~~~~gkv  335 (344)
                      .+.+++..+|+
T Consensus       314 ~~~~~~~~~kv  324 (325)
T cd08264         314 ELFSKERDGRI  324 (325)
T ss_pred             HHHcCCCcccc
Confidence            99988777775

This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo

>cd05285 sorbitol_DH Sorbitol dehydrogenase

Probab=100.00  E-value=3.9e-37  Score=283.85  Aligned_cols=310  Identities=26%  Similarity=0.388  Sum_probs=248.0

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC-CC--CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG   94 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~-~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~   94 (344)
                      .++.+.+++.+.|.+.++||+||+.++++|+.|+..+.+. .+  ...+|.++|+|++|+|+++|+++++|++||+|+..
T Consensus         6 ~~~~~~~~~~~~~~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   85 (343)
T cd05285           6 GPGDLRLEERPIPEPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAGTVVAVGSGVTHLKVGDRVAIE   85 (343)
T ss_pred             cCCceeEEECCCCCCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeEEEEeeCCCCCCCCCCCEEEEc
Confidence            3467888999999999999999999999999998765322 11  12356789999999999999999999999999876


Q ss_pred             ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199           95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR  174 (344)
Q Consensus        95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  174 (344)
                      +. .+|++|.+|..|..++|++..+..      .....|+|++|+.++++.++++|+++++.+++.+ ..+.+|++++ .
T Consensus        86 ~~-~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~~~-~  156 (343)
T cd05285          86 PG-VPCRTCEFCKSGRYNLCPDMRFAA------TPPVDGTLCRYVNHPADFCHKLPDNVSLEEGALV-EPLSVGVHAC-R  156 (343)
T ss_pred             cc-cCCCCChhHhCcCcccCcCccccc------cccCCCceeeeEEecHHHcEECcCCCCHHHhhhh-hHHHHHHHHH-H
Confidence            54 499999999999999998752210      0013589999999999999999999999999866 5778899887 5


Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH------HHHHhc--CCc
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE------QMKALG--KSL  245 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~------~~~~~~--~~~  245 (344)
                      ...+++|++|+|.|+|++|++++++|+.+|++ |+++++++++.+.+ +++|++.+++.++.+      .+.+..  +++
T Consensus       157 ~~~~~~g~~vlI~g~g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~-~~~g~~~vi~~~~~~~~~~~~~~~~~~~~~~~  235 (343)
T cd05285         157 RAGVRPGDTVLVFGAGPIGLLTAAVAKAFGATKVVVTDIDPSRLEFA-KELGATHTVNVRTEDTPESAEKIAELLGGKGP  235 (343)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEeccccccchhHHHHHHHHhCCCCC
Confidence            56669999999998899999999999999997 88888888888777 678999988876543      233332  569


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-------ceee--eechHhHHHHHHHHHhCCCc--cc-eE
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-------ASLN--IGGTKDTQEMLEYCAAHKIY--PQ-IE  312 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~g~~~--~~-~~  312 (344)
                      |++||++|+...+..++++++++|+++.+|.. ....++.       ..+.  ....+.++++++++.++.+.  +. .+
T Consensus       236 d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~  315 (343)
T cd05285         236 DVVIECTGAESCIQTAIYATRPGGTVVLVGMGKPEVTLPLSAASLREIDIRGVFRYANTYPTAIELLASGKVDVKPLITH  315 (343)
T ss_pred             CEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCCCccCHHHHhhCCcEEEEeccChHHHHHHHHHHHcCCCCchHhEEE
Confidence            99999999865589999999999999999865 2111111       1111  12236788899999999875  33 47


Q ss_pred             EEeCccHHHHHHHHHcCC-cceEEEE
Q 019199          313 TIPIENVNEALERLIKRD-VKYRFVI  337 (344)
Q Consensus       313 ~~~~~~~~~a~~~~~~~~-~~gkvvi  337 (344)
                      +|+++++.+|++.+.+++ ..+|++|
T Consensus       316 ~~~l~~~~~a~~~~~~~~~~~~k~~~  341 (343)
T cd05285         316 RFPLEDAVEAFETAAKGKKGVIKVVI  341 (343)
T ss_pred             EEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence            899999999999999875 4589998

Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.4e-37  Score=281.09  Aligned_cols=311  Identities=25%  Similarity=0.396  Sum_probs=256.5

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY   96 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~   96 (344)
                      .+..+++.+.+.|.+.+++|+|++.++++|++|+..+.|... ...+|.++|||++|+|+.+|++++.|++||+|++.+.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~   90 (342)
T cd08266          11 GPEVLEYGDLPEPEPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAGVVEAVGPGVTNVKPGQRVVIYPG   90 (342)
T ss_pred             CccceeEeecCCCCCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEEEEEEeCCCCCCCCCCCEEEEccc
Confidence            445677778888889999999999999999999988877543 2345788999999999999999999999999987765


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199           97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK  176 (344)
Q Consensus        97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~  176 (344)
                      . .|++|.+|.++.++.|+...  +.     |....|++++|+.++++.++++|+++++.+++.+++.+.+|++++....
T Consensus        91 ~-~~~~~~~~~~~~~~~~~~~~--~~-----g~~~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~~a~~~l~~~~  162 (342)
T cd08266          91 I-SCGRCEYCLAGRENLCAQYG--IL-----GEHVDGGYAEYVAVPARNLLPIPDNLSFEEAAAAPLTFLTAWHMLVTRA  162 (342)
T ss_pred             c-ccccchhhcccccccccccc--cc-----ccccCcceeEEEEechHHceeCCCCCCHHHHHhhhhHHHHHHHHHHHhc
Confidence            4 69999999999999998742  21     2234688999999999999999999999999999999999999987777


Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---h--cCCccEEEE
Q 019199          177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L--GKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~dvvid  250 (344)
                      .+.++++++|+|+ +.+|++++++++..|++|+++++++++.+.+ +.++.+.+++..+.+....   .  .+++|++++
T Consensus       163 ~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  241 (342)
T cd08266         163 RLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERA-KELGADYVIDYRKEDFVREVRELTGKRGVDVVVE  241 (342)
T ss_pred             CCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCeEEecCChHHHHHHHHHhCCCCCcEEEE
Confidence            7799999999998 7999999999999999999999998888887 5788877777665443222   2  257999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCCCc--cccCCc-------eee---eechHhHHHHHHHHHhCCCccce-EEEeCc
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIPIE  317 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~  317 (344)
                      ++|... +..++++++++|+++.+|....  ..++..       .+.   ......+.++++++.++.+++.. +.|+++
T Consensus       242 ~~g~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~  320 (342)
T cd08266         242 HVGAAT-WEKSLKSLARGGRLVTCGATTGYEAPIDLRHVFWRQLSILGSTMGTKAELDEALRLVFRGKLKPVIDSVFPLE  320 (342)
T ss_pred             CCcHHH-HHHHHHHhhcCCEEEEEecCCCCCCCcCHHHHhhcceEEEEEecCCHHHHHHHHHHHHcCCcccceeeeEcHH
Confidence            999865 8999999999999999986521  111110       011   22345788899999999988754 899999


Q ss_pred             cHHHHHHHHHcCCcceEEEEE
Q 019199          318 NVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       318 ~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++++++.+.+++..+|++++
T Consensus       321 ~~~~a~~~~~~~~~~~kvv~~  341 (342)
T cd08266         321 EAAEAHRRLESREQFGKIVLT  341 (342)
T ss_pred             HHHHHHHHHHhCCCCceEEEe
Confidence            999999999988878999986

This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone

>cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase

Probab=100.00  E-value=8.6e-37  Score=281.52  Aligned_cols=313  Identities=27%  Similarity=0.408  Sum_probs=255.0

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      +|... ..+.+.+++.+.|++.+++|+||+.++++|+.|+....+.......|.++|+|++|+|+++|++++.|++||+|
T Consensus         3 ~~~~~-~~~~~~~~~~~~~~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G~V~~~G~~v~~~~~Gd~V   81 (343)
T cd08235           3 AAVLH-GPNDVRLEEVPVPEPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAGEIVEVGDGVTGFKVGDRV   81 (343)
T ss_pred             EEEEe-cCCceEEEEccCCCCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEEEEEeeCCCCCCCCCCCEE
Confidence            44443 34568888999999999999999999999999998887765333457789999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce-----EEEcCCCCCcccccccchhhh
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY-----CYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-----~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +..+.. .|++|..|..++.++|+.+.+.       +....|+|++|+.++++.     ++++|+++++.+++.+ ..+.
T Consensus        82 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~v~v~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~  152 (343)
T cd08235          82 FVAPHV-PCGECHYCLRGNENMCPNYKKF-------GNLYDGGFAEYVRVPAWAVKRGGVLKLPDNVSFEEAALV-EPLA  152 (343)
T ss_pred             EEccCC-CCCCChHHHCcCcccCCCccee-------ccCCCCcceeeEEecccccccccEEECCCCCCHHHHHhh-hHHH
Confidence            887643 7889999999999999886432       112458999999999998     9999999999999765 7888


Q ss_pred             HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG  242 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~  242 (344)
                      +|++++... .+++|++|+|+|+|.+|++++++|+..|++ |+++++++++.+.+ +++|.++++++++.+...   +..
T Consensus       153 ~a~~~l~~~-~~~~g~~VlV~g~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~  230 (343)
T cd08235         153 CCINAQRKA-GIKPGDTVLVIGAGPIGLLHAMLAKASGARKVIVSDLNEFRLEFA-KKLGADYTIDAAEEDLVEKVRELT  230 (343)
T ss_pred             HHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEecCCccCHHHHHHHHh
Confidence            999999766 679999999998899999999999999998 88888888888877 688998888877654322   222


Q ss_pred             --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCC-------ceee---eechHhHHHHHHHHHhCCC
Q 019199          243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSP-------ASLN---IGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~-------~~~~---~~~~~~~~~~~~~~~~g~~  307 (344)
                        +++|+++|++++...+..++++++++|+++.+|.. .  ...++.       ..+.   ....+.++++++++.++.+
T Consensus       231 ~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~l~~~~~l  310 (343)
T cd08235         231 DGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGSTVNIDPNLIHYREITITGSYAASPEDYKEALELIASGKI  310 (343)
T ss_pred             CCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCCCcccCHHHHhhCceEEEEEecCChhhHHHHHHHHHcCCC
Confidence              56999999999765689999999999999999854 1  111111       1111   2234678889999999998


Q ss_pred             cc--c-eEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          308 YP--Q-IETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       308 ~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      ++  . ..+|+++++.++++.+.+++ .+|+|+
T Consensus       311 ~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi  342 (343)
T cd08235         311 DVKDLITHRFPLEDIEEAFELAADGK-SLKIVI  342 (343)
T ss_pred             ChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEe
Confidence            63  3 47899999999999999998 899986

Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i

>cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=6.7e-37  Score=279.51  Aligned_cols=306  Identities=20%  Similarity=0.310  Sum_probs=243.4

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++.+.+ ++.+++++++.|+++++||+||+.++++|++|.....|..+   +|.++|||++|+|+++|++   +++||+
T Consensus         2 ~a~~~~~-~~~~~~~~~~~p~~~~~~vlV~v~a~~i~~~d~~~~~g~~~---~~~~~G~e~~G~Vv~~G~~---~~~G~~   74 (319)
T cd08242           2 KALVLDG-GLDLRVEDLPKPEPPPGEALVRVLLAGICNTDLEIYKGYYP---FPGVPGHEFVGIVEEGPEA---ELVGKR   74 (319)
T ss_pred             eeEEEeC-CCcEEEEECCCCCCCCCeEEEEEEEEEEccccHHHHcCCCC---CCCccCceEEEEEEEeCCC---CCCCCe
Confidence            3555543 56789999999999999999999999999999988877553   5778999999999999987   689999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |...+.. .|+.|.+|..|.++.|......  +.    ....|++++|+.++.++++++|++++..+++.+ ....+++.
T Consensus        75 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~~--~~----~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~~~~  146 (319)
T cd08242          75 VVGEINI-ACGRCEYCRRGLYTHCPNRTVL--GI----VDRDGAFAEYLTLPLENLHVVPDLVPDEQAVFA-EPLAAALE  146 (319)
T ss_pred             EEECCCc-CCCCChhhhCcCcccCCCCccc--Cc----cCCCCceEEEEEechHHeEECcCCCCHHHhhhh-hHHHHHHH
Confidence            9776655 6999999999999888864211  10    013589999999999999999999999888753 34556666


Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      .+ +...+++|++|||+|+|.+|++++|+|+.+|++|++++.++++.+.+ +++|++.+++..+.    ...+++|+++|
T Consensus       147 ~~-~~~~~~~g~~vlV~g~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~----~~~~~~d~vid  220 (319)
T cd08242         147 IL-EQVPITPGDKVAVLGDGKLGLLIAQVLALTGPDVVLVGRHSEKLALA-RRLGVETVLPDEAE----SEGGGFDVVVE  220 (319)
T ss_pred             HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHH-HHcCCcEEeCcccc----ccCCCCCEEEE
Confidence            55 45556999999999889999999999999999999999999998888 56999888776542    12357999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee------ee-chHhHHHHHHHHHhCCCc--cce-EEEeCccH
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN------IG-GTKDTQEMLEYCAAHKIY--PQI-ETIPIENV  319 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~------~~-~~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~  319 (344)
                      ++|+...+..++++++++|+++..+.. ....++...+.      .+ ....++++++++.+++++  +.+ +.|+++++
T Consensus       221 ~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~  300 (319)
T cd08242         221 ATGSPSGLELALRLVRPRGTVVLKSTYAGPASFDLTKAVVNEITLVGSRCGPFAPALRLLRKGLVDVDPLITAVYPLEEA  300 (319)
T ss_pred             CCCChHHHHHHHHHhhcCCEEEEEcccCCCCccCHHHheecceEEEEEecccHHHHHHHHHcCCCChhhceEEEEeHHHH
Confidence            999866689999999999999987654 22222211111      11 112488899999999994  444 89999999


Q ss_pred             HHHHHHHHcCCcceEEEEE
Q 019199          320 NEALERLIKRDVKYRFVID  338 (344)
Q Consensus       320 ~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++||+.+.++. .+|++|+
T Consensus       301 ~~a~~~~~~~~-~~k~vi~  318 (319)
T cd08242         301 LEAFERAAEPG-ALKVLLR  318 (319)
T ss_pred             HHHHHHHhcCC-ceEEEeC
Confidence            99999998766 5899875

This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta

>cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2

Probab=100.00  E-value=3.8e-37  Score=281.56  Aligned_cols=280  Identities=20%  Similarity=0.279  Sum_probs=233.1

Q ss_pred             CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      .+++.+++.|.+.++||+||+.++++|++|+..+.|..+ ...+|.++|||++|+|+++|++++++++||+|+..+    
T Consensus        15 ~~~~~~~~~p~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G~V~~~G~~v~~~~~Gd~V~~~~----   90 (324)
T cd08292          15 VLEIGEVPKPTPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVGVVDAVGEGVKGLQVGQRVAVAP----   90 (324)
T ss_pred             eEEEeecCCCCCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEecc----
Confidence            478899999999999999999999999999988877654 344678999999999999999999999999997532    


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ  179 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  179 (344)
                                                     ..|+|++|+.+++..++++|+++++.+++.+++.+.|||+++.. ..++
T Consensus        91 -------------------------------~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~~~~-~~~~  138 (324)
T cd08292          91 -------------------------------VHGTWAEYFVAPADGLVPLPDGISDEVAAQLIAMPLSALMLLDF-LGVK  138 (324)
T ss_pred             -------------------------------CCCcceeEEEEchHHeEECCCCCCHHHhhhccccHHHHHHHHHh-hCCC
Confidence                                           24899999999999999999999999999999889999998865 5669


Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~g  253 (344)
                      +|++|||+|+ |.+|++++++|+++|++++++++++++.+.+ +++|++++++.++.+..   .+.+  +++|++||++|
T Consensus       139 ~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~d~~g  217 (324)
T cd08292         139 PGQWLIQNAAGGAVGKLVAMLAAARGINVINLVRRDAGVAEL-RALGIGPVVSTEQPGWQDKVREAAGGAPISVALDSVG  217 (324)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HhcCCCEEEcCCCchHHHHHHHHhCCCCCcEEEECCC
Confidence            9999999987 9999999999999999999999888888888 46899888887765433   2333  57999999999


Q ss_pred             CchhHHHHHHhcccCCEEEEEcCC--CccccCC-------ceee--ee-----------chHhHHHHHHHHHhCCCccc-
Q 019199          254 GDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSP-------ASLN--IG-----------GTKDTQEMLEYCAAHKIYPQ-  310 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~-------~~~~--~~-----------~~~~~~~~~~~~~~g~~~~~-  310 (344)
                      +.. ...++++++++|+++.+|..  ....++.       ..+.  ..           ..+.++++++++.++.+++. 
T Consensus       218 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~  296 (324)
T cd08292         218 GKL-AGELLSLLGEGGTLVSFGSMSGEPMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPV  296 (324)
T ss_pred             Chh-HHHHHHhhcCCcEEEEEecCCCCCCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCcc
Confidence            875 89999999999999999864  1222221       1111  10           12467889999999999854 


Q ss_pred             eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          311 IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .+.|+++++.+|++.+.+.+..+|++++
T Consensus       297 ~~~~~~~~~~~a~~~~~~~~~~~kvvv~  324 (324)
T cd08292         297 EAVFDLGDAAKAAAASMRPGRAGKVLLR  324 (324)
T ss_pred             ccEecHHHHHHHHHHHHcCCCCceEEeC
Confidence            4889999999999999988778999873

2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina

>PLN02702 L-idonate 5-dehydrogenase

Probab=100.00  E-value=1.5e-36  Score=282.17  Aligned_cols=311  Identities=23%  Similarity=0.375  Sum_probs=242.3

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG   94 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~   94 (344)
                      .+..+++++.+.|.|.++||+||+.++++|++|+....+...   ...+|.++|||++|+|+++|+++++|++||+|+..
T Consensus        25 ~~~~l~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~V~~~  104 (364)
T PLN02702         25 GVNTLKIQPFKLPPLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAGIIEEVGSEVKHLVVGDRVALE  104 (364)
T ss_pred             cCCceEEEeccCCCCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeEEEEEECCCCCCCCCCCEEEEc
Confidence            346788888888999999999999999999999988765321   12357789999999999999999999999999876


Q ss_pred             ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199           95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR  174 (344)
Q Consensus        95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  174 (344)
                      +.. +|++|..|.+|..+.|++..+.  +    .....|+|++|+.++...++++|+++++.+++.. ..+.++++++ .
T Consensus       105 ~~~-~~~~c~~c~~g~~~~c~~~~~~--~----~~~~~g~~~~y~~v~~~~~~~~P~~l~~~~aa~~-~~~~~a~~~~-~  175 (364)
T PLN02702        105 PGI-SCWRCNLCKEGRYNLCPEMKFF--A----TPPVHGSLANQVVHPADLCFKLPENVSLEEGAMC-EPLSVGVHAC-R  175 (364)
T ss_pred             CCC-CCCCCcchhCcCcccCCCcccc--C----CCCCCCcccceEEcchHHeEECCCCCCHHHHhhh-hHHHHHHHHH-H
Confidence            665 8999999999999999874321  1    0123589999999999999999999999888742 2344577777 4


Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCC--CH---HHHHHh----cCC
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSS--DL---EQMKAL----GKS  244 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~--~~---~~~~~~----~~~  244 (344)
                      ...+.+|++|+|+|+|++|++++++|+.+|++ |+++++++++.+.+ +++|++.+++..  ..   +.+.+.    .++
T Consensus       176 ~~~~~~g~~vlI~g~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (364)
T PLN02702        176 RANIGPETNVLVMGAGPIGLVTMLAARAFGAPRIVIVDVDDERLSVA-KQLGADEIVLVSTNIEDVESEVEEIQKAMGGG  254 (364)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEecCcccccHHHHHHHHhhhcCCC
Confidence            55568999999998899999999999999995 67777777777766 689998877643  12   222222    257


Q ss_pred             ccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-------ceee--eechHhHHHHHHHHHhCCCc--cc-e
Q 019199          245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-------ASLN--IGGTKDTQEMLEYCAAHKIY--PQ-I  311 (344)
Q Consensus       245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-------~~~~--~~~~~~~~~~~~~~~~g~~~--~~-~  311 (344)
                      +|++||++|+...+..++++++++|+++.+|.. ....+..       ..+.  +.....++.+++++.++.+.  +. .
T Consensus       255 ~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  334 (364)
T PLN02702        255 IDVSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNEMTVPLTPAAAREVDVVGVFRYRNTWPLCLEFLRSGKIDVKPLIT  334 (364)
T ss_pred             CCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCCcccHHHHHhCccEEEEeccChHHHHHHHHHHHcCCCCchHheE
Confidence            999999999766799999999999999999854 2111111       1111  22235788899999999885  33 3


Q ss_pred             EEEeC--ccHHHHHHHHHcCCcceEEEEE
Q 019199          312 ETIPI--ENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       312 ~~~~~--~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ++|++  +++++|++.+.+++..+|+++.
T Consensus       335 ~~~~l~~~~~~~a~~~~~~~~~~~kvv~~  363 (364)
T PLN02702        335 HRFGFSQKEVEEAFETSARGGNAIKVMFN  363 (364)
T ss_pred             EEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence            77665  7999999999988878999985

>cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=1.2e-36  Score=280.31  Aligned_cols=304  Identities=23%  Similarity=0.303  Sum_probs=240.7

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-----------CCCCCCCcccccceEEEEecC
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-----------DSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-----------~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      +++...+  .+++++++.|++.+++|+||+.++++|+.|+....|...           ...+|.++|||++|+|+++|+
T Consensus         3 a~~~~~~--~~~~~~~~~p~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~   80 (341)
T cd08262           3 AAVFRDG--PLVVRDVPDPEPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGHEFCGEVVDYGP   80 (341)
T ss_pred             eEEEeCC--ceEEEecCCCCCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCcccccceeEEEEEeCC
Confidence            4444333  788889999999999999999999999999988876221           223578899999999999999


Q ss_pred             CCCC-CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccc
Q 019199           81 NVSR-FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAA  159 (344)
Q Consensus        81 ~~~~-~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa  159 (344)
                      .+++ |++||+|+..+. ..|+.|..|..|...                 ...|+|++|+.++.+.++++|+++++.+++
T Consensus        81 ~v~~~~~~Gd~V~~~~~-~~~~~~~~~~~~~~~-----------------~~~g~~~~~~~v~~~~~~~lP~~~s~~~a~  142 (341)
T cd08262          81 GTERKLKVGTRVTSLPL-LLCGQGASCGIGLSP-----------------EAPGGYAEYMLLSEALLLRVPDGLSMEDAA  142 (341)
T ss_pred             CCcCCCCCCCEEEecCC-cCCCCChhhhCCCCc-----------------CCCCceeeeEEechHHeEECCCCCCHHHhh
Confidence            9987 999999988765 479999999433211                 235899999999999999999999999876


Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-  237 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-  237 (344)
                       ++..+.+||+++ ...++++|++|||+|+|++|++++|+|+.+|++ ++++++++++.+.+ +++|++++++.+..+. 
T Consensus       143 -~~~~~~~a~~~~-~~~~~~~g~~VlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~i~~~~~~~~  219 (341)
T cd08262         143 -LTEPLAVGLHAV-RRARLTPGEVALVIGCGPIGLAVIAALKARGVGPIVASDFSPERRALA-LAMGADIVVDPAADSPF  219 (341)
T ss_pred             -hhhhHHHHHHHH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHcCCcEEEcCCCcCHH
Confidence             667888999986 556669999999998899999999999999996 66666677777766 6899988888654311 


Q ss_pred             -----HHH-h-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-------ceee---eechHhHHHHH
Q 019199          238 -----MKA-L-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-------ASLN---IGGTKDTQEML  299 (344)
Q Consensus       238 -----~~~-~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-------~~~~---~~~~~~~~~~~  299 (344)
                           ..+ . .+++|+++|++|+...+..++++++++|+++.+|.. ....+..       ..+.   ....+.+.+++
T Consensus       220 ~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (341)
T cd08262         220 AAWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESDNIEPALAIRKELTLQFSLGYTPEEFADAL  299 (341)
T ss_pred             HHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCCccCHHHHhhcceEEEEEecccHHHHHHHH
Confidence                 111 2 257999999998854589999999999999999865 1111111       1111   12335788999


Q ss_pred             HHHHhCCCcc--c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          300 EYCAAHKIYP--Q-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       300 ~~~~~g~~~~--~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++.++.+.+  . .+.|++++++++++.+.+++..||+|++
T Consensus       300 ~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~  341 (341)
T cd08262         300 DALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD  341 (341)
T ss_pred             HHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence            9999999975  2 4889999999999999999988999974

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like

Probab=100.00  E-value=2.9e-36  Score=278.29  Aligned_cols=314  Identities=22%  Similarity=0.320  Sum_probs=248.3

Q ss_pred             eeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++.+. .++.+++.+.+.|.| +++||+||+.++++|++|+..+.|..+ ...|.++|||++|+|+++|+++..+++||+
T Consensus         3 ~~~~~-~~~~~~~~~~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~   80 (345)
T cd08287           3 ATVIH-GPGDIRVEEVPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVGVVEEVGSEVTSVKPGDF   80 (345)
T ss_pred             eeEEe-cCCceeEEeCCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEEEEEEeCCCCCccCCCCE
Confidence            44443 455688999999996 999999999999999999888877654 245789999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCccccc-----ccch
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAA-----PLLC  163 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa-----~l~~  163 (344)
                      |+.. ....|+.|.+|..|..+.|.+..+.       +....|+|++|+.++.+  .++++|+++++..+.     ++..
T Consensus        81 V~~~-~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~g~~~~~~~v~~~~~~~~~lP~~l~~~~~~~~~~~~l~~  152 (345)
T cd08287          81 VIAP-FAISDGTCPFCRAGFTTSCVHGGFW-------GAFVDGGQGEYVRVPLADGTLVKVPGSPSDDEDLLPSLLALSD  152 (345)
T ss_pred             EEec-cccCCCCChhhhCcCcccCCCCCcc-------cCCCCCceEEEEEcchhhCceEECCCCCChhhhhhhhhHhhhc
Confidence            9763 2346999999999999999864321       12356899999999975  899999999882221     2336


Q ss_pred             hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---H
Q 019199          164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---K  239 (344)
Q Consensus       164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~  239 (344)
                      .+.+|++++.. ..+++|++|+|.|+|.+|++++++|+.+|++ ++++++++++.+.+ +++|++.++++......   .
T Consensus       153 ~~~~a~~~~~~-~~~~~g~~vlI~g~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~-~~~ga~~v~~~~~~~~~~~i~  230 (345)
T cd08287         153 VMGTGHHAAVS-AGVRPGSTVVVVGDGAVGLCAVLAAKRLGAERIIAMSRHEDRQALA-REFGATDIVAERGEEAVARVR  230 (345)
T ss_pred             HHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCceEecCCcccHHHHHH
Confidence            78889998864 4568999999988899999999999999995 77777777777666 68999999988764433   3


Q ss_pred             Hhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCce-ee---------eechHhHHHHHHHHHhCC
Q 019199          240 ALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPAS-LN---------IGGTKDTQEMLEYCAAHK  306 (344)
Q Consensus       240 ~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~-~~---------~~~~~~~~~~~~~~~~g~  306 (344)
                      +..  .++|+++|++|+...+..++++++++|+++.+|... ...++... +.         ....+.++++++++.++.
T Consensus       231 ~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  310 (345)
T cd08287         231 ELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGGVELDVRELFFRNVGLAGGPAPVRRYLPELLDDVLAGR  310 (345)
T ss_pred             HhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCCCccCHHHHHhcceEEEEecCCcHHHHHHHHHHHHcCC
Confidence            332  479999999998777999999999999999998652 23332211 11         122467899999999999


Q ss_pred             Ccc---ceEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          307 IYP---QIETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       307 ~~~---~~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++   .++.|++++++++++.+.+++. .|++|+
T Consensus       311 l~~~~~~~~~~~l~~~~~a~~~~~~~~~-~k~~~~  344 (345)
T cd08287         311 INPGRVFDLTLPLDEVAEGYRAMDERRA-IKVLLR  344 (345)
T ss_pred             CCHHHhEEeeecHHHHHHHHHHHhCCCc-eEEEeC
Confidence            986   3488999999999998887664 499885

This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=1.5e-36  Score=280.63  Aligned_cols=300  Identities=23%  Similarity=0.351  Sum_probs=235.5

Q ss_pred             CCCcccee-eccCCCCCCcEEEEEeeeecccchhhhhcCCCC--------------------CCCCCCCcccccceEEEE
Q 019199           19 SGVLSPYS-FNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--------------------DSKYPLVPGHEIVGIVKE   77 (344)
Q Consensus        19 ~~~~~~~~-~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------------------~~~~p~~~G~e~~G~V~~   77 (344)
                      +..+.+.+ .+.|.+.+++|+||+.++++|++|+....|..+                    ...+|.++|||++|+|++
T Consensus        12 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~V~~   91 (350)
T cd08274          12 LDKLVYRDDVPVPTPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGTLSFPRIQGADIVGRVVA   91 (350)
T ss_pred             ccceeecccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCCCCCCcccCCcceEEEEE
Confidence            33455543 467778999999999999999999988766432                    235688999999999999


Q ss_pred             ecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccc
Q 019199           78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL  157 (344)
Q Consensus        78 ~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~  157 (344)
                      +|+++++|++||+|+..+.. .|+.|..|..     |...          +....|++++|+.++...++++|+++++.+
T Consensus        92 vG~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~-----~~~~----------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~  155 (350)
T cd08274          92 VGEGVDTARIGERVLVDPSI-RDPPEDDPAD-----IDYI----------GSERDGGFAEYTVVPAENAYPVNSPLSDVE  155 (350)
T ss_pred             eCCCCCCCCCCCEEEEecCc-CCCCcccccc-----cccc----------CCCCCccceEEEEecHHHceeCCCCCCHHH
Confidence            99999999999999876543 4666654321     1100          112358999999999999999999999999


Q ss_pred             ccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH
Q 019199          158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE  236 (344)
Q Consensus       158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~  236 (344)
                      ++++++.+.|||+++ ....+++|++|||+|+ |.+|++++++|+.+|++|+++++++ +++.+ +++|++.+++.....
T Consensus       156 ~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~-~~~g~~~~~~~~~~~  232 (350)
T cd08274         156 LATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAV-RALGADTVILRDAPL  232 (350)
T ss_pred             HHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHH-HhcCCeEEEeCCCcc
Confidence            999999999999988 4456699999999998 9999999999999999998888665 77777 689987665544322


Q ss_pred             HH-HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccCCceee----------eechHhHHHHHHH
Q 019199          237 QM-KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLN----------IGGTKDTQEMLEY  301 (344)
Q Consensus       237 ~~-~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~----------~~~~~~~~~~~~~  301 (344)
                      .. ...  .+++|++||++|+.. +..++++++++|+++.+|.. .. ..++...+.          ....+.+++++++
T Consensus       233 ~~~~~~~~~~~~d~vi~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  311 (350)
T cd08274         233 LADAKALGGEPVDVVADVVGGPL-FPDLLRLLRPGGRYVTAGAIAGPVVELDLRTLYLKDLTLFGSTLGTREVFRRLVRY  311 (350)
T ss_pred             HHHHHhhCCCCCcEEEecCCHHH-HHHHHHHhccCCEEEEecccCCccccCCHHHhhhcceEEEEeecCCHHHHHHHHHH
Confidence            11 122  267999999999865 99999999999999999854 21 222221111          2235788999999


Q ss_pred             HHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          302 CAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       302 ~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +.++++++.+ +.|++++++++++.+..++..+|+|+.
T Consensus       312 ~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~  349 (350)
T cd08274         312 IEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLV  349 (350)
T ss_pred             HHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEe
Confidence            9999998754 889999999999999988888999975

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase

Probab=100.00  E-value=1.1e-36  Score=280.41  Aligned_cols=290  Identities=21%  Similarity=0.211  Sum_probs=230.4

Q ss_pred             eeeeecC-CCCCccceeecc----CCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCccccc--ceEEEEecCCC
Q 019199           11 LGWAARD-PSGVLSPYSFNR----RAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEI--VGIVKEVGHNV   82 (344)
Q Consensus        11 ~~~~~~~-~~~~~~~~~~~~----p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~--~G~V~~~G~~~   82 (344)
                      ++|...+ +++.|++.+.+.    |+|++|||||||.|+++|+.|+....|.... ...|.++|+++  .|.+..+|+.+
T Consensus         9 ~~~~~~~~~~~~~~~~~~~~~~~~p~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~~~v~~~v   88 (338)
T cd08295           9 KAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVAKVVDSGN   88 (338)
T ss_pred             ecCCCCCCCccceEEEEecCCcCCCCCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEEEEEecCC
Confidence            4444432 356788888877    8899999999999999999999888775332 34577888754  45666678888


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec-ceEEEcC-CCCCcc-ccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIA-NDYPLA-LAA  159 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~P-~~~~~~-~aa  159 (344)
                      +.|++||+|+.                                      .|+|+||+++++ ..++++| +++++. +++
T Consensus        89 ~~~~vGd~V~~--------------------------------------~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa  130 (338)
T cd08295          89 PDFKVGDLVWG--------------------------------------FTGWEEYSLIPRGQDLRKIDHTDVPLSYYLG  130 (338)
T ss_pred             CCCCCCCEEEe--------------------------------------cCCceeEEEecchhceeecCCCCCCHHHHHH
Confidence            89999999952                                      257999999999 7999995 678886 788


Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQ  237 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~  237 (344)
                      ++++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+.+.+|+++++++.+. +.
T Consensus       131 ~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~  210 (338)
T cd08295         131 LLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLKNKLGFDDAFNYKEEPDL  210 (338)
T ss_pred             hcccHHHHHHHHHHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHhcCCceeEEcCCcccH
Confidence            999999999999987777899999999998 9999999999999999999999999988888433999999986432 22


Q ss_pred             ---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc-------cCCc-------eee---eec-----
Q 019199          238 ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK-------FSPA-------SLN---IGG-----  291 (344)
Q Consensus       238 ---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~-------~~~~-------~~~---~~~-----  291 (344)
                         +.+. .+++|++||++|+. .+..++++++++|+++.+|......       .+..       .+.   ...     
T Consensus       211 ~~~i~~~~~~gvd~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  289 (338)
T cd08295         211 DAALKRYFPNGIDIYFDNVGGK-MLDAVLLNMNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRY  289 (338)
T ss_pred             HHHHHHhCCCCcEEEEECCCHH-HHHHHHHHhccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHH
Confidence               2222 36899999999985 4999999999999999998641110       0100       110   111     


Q ss_pred             hHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          292 TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      .+.++++++++.+|.+++.+ ..|+++++++|++.+.+++..||+|+++
T Consensus       290 ~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~GkvVl~~  338 (338)
T cd08295         290 PEFLEEMSGYIKEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV  338 (338)
T ss_pred             HHHHHHHHHHHHCCCeEceeecccCHHHHHHHHHHHhcCCCCceEEEEC
Confidence            13467889999999998765 6799999999999999998899999874

This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in

>TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase

Probab=100.00  E-value=7.3e-37  Score=280.00  Aligned_cols=275  Identities=17%  Similarity=0.193  Sum_probs=223.9

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV   97 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~   97 (344)
                      .++.+++.+.+.|+|++|||||||.|+++|+.+..   |.......|.++|+|++|+|++.|   ++|++||+|+..   
T Consensus        15 ~~~~l~~~~~~~p~~~~~evlv~v~a~~~n~~~~~---g~~~~~~~~~i~G~~~~g~v~~~~---~~~~~GdrV~~~---   85 (325)
T TIGR02825        15 TDSDFELKTVELPPLNNGEVLLEALFLSVDPYMRV---AAKRLKEGDTMMGQQVARVVESKN---VALPKGTIVLAS---   85 (325)
T ss_pred             CCCceEEEeccCCCCCCCcEEEEEEEEecCHHHhc---ccCcCCCCCcEecceEEEEEEeCC---CCCCCCCEEEEe---
Confidence            45678888999999999999999999999997653   322222346799999999999977   469999999631   


Q ss_pred             cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEc----CCCCCcccc-cccchhhhHhHHHH
Q 019199           98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI----ANDYPLALA-APLLCAGITVYTPM  172 (344)
Q Consensus        98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~----P~~~~~~~a-a~l~~~~~ta~~~l  172 (344)
                                                         ++|++|+.++.+.++++    |+++++.++ +++++++.|||+++
T Consensus        86 -----------------------------------~~~~~~~~~~~~~~~~l~~~~p~~~~~~~aaa~l~~~~~TA~~~l  130 (325)
T TIGR02825        86 -----------------------------------PGWTSHSISDGKDLEKLLTEWPDTLPLSLALGTVGMPGLTAYFGL  130 (325)
T ss_pred             -----------------------------------cCceeeEEechhheEEccccccCCCCHHHHHHhcccHHHHHHHHH
Confidence                                               35899999999888877    899999987 68999999999998


Q ss_pred             HhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH----HHHHhc-CCcc
Q 019199          173 MRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE----QMKALG-KSLD  246 (344)
Q Consensus       173 ~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~----~~~~~~-~~~d  246 (344)
                      .+...+++|++|||+|+ |++|++++|+||.+|++|+++++++++.+.+ +++|++.++++++.+    .+.... +++|
T Consensus       131 ~~~~~~~~g~~VLI~ga~g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~-~~lGa~~vi~~~~~~~~~~~~~~~~~~gvd  209 (325)
T TIGR02825       131 LEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKVAYL-KKLGFDVAFNYKTVKSLEETLKKASPDGYD  209 (325)
T ss_pred             HHHhCCCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeccccccHHHHHHHhCCCCeE
Confidence            77777899999999996 9999999999999999999999999998888 689999999876532    222232 5799


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCCc----cccCC-----------ceee--ee-c------hHhHHHHHHHH
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK----VKFSP-----------ASLN--IG-G------TKDTQEMLEYC  302 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----~~~~~-----------~~~~--~~-~------~~~~~~~~~~~  302 (344)
                      ++||++|+.. +..++++++++|+++.+|....    ...+.           ..+.  .. .      .+.++++++++
T Consensus       210 vv~d~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~  288 (325)
T TIGR02825       210 CYFDNVGGEF-SNTVIGQMKKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWV  288 (325)
T ss_pred             EEEECCCHHH-HHHHHHHhCcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHH
Confidence            9999999876 8999999999999999986410    11111           0111  10 1      24678899999


Q ss_pred             HhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          303 AAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       303 ~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .+|++++.+ ..|+++++++|++.+.+++..||+|+.
T Consensus       289 ~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gkvVv~  325 (325)
T TIGR02825       289 LEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIVK  325 (325)
T ss_pred             HCCCcccceeccccHHHHHHHHHHHhcCCCCCeEEeC
Confidence            999998765 789999999999999999988999973

Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase.

>COG2130 Putative NADP-dependent oxidoreductases [General function prediction only]

Probab=100.00  E-value=1.3e-36  Score=259.57  Aligned_cols=283  Identities=18%  Similarity=0.168  Sum_probs=228.9

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEec--CCCCCCCCCCEEEEecc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG--HNVSRFKVGDHVGVGTY   96 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G--~~~~~~~~Gd~V~~~~~   96 (344)
                      .++|++++.++|+|++||||+|+.|.+++|.-...+. ..+.-..|.-+|-..+|.++...  |+...|++||.|+.   
T Consensus        24 ~d~F~lee~~vp~p~~GqvLl~~~ylS~DPymRgrm~-d~~SY~~P~~lG~~~~gg~V~~Vv~S~~~~f~~GD~V~~---   99 (340)
T COG2130          24 PDDFRLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMS-DAPSYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVG---   99 (340)
T ss_pred             CCCceeEeccCCCCCcCceEEEEEEeccCHHHeeccc-CCcccCCCcCCCceeECCeeEEEEecCCCCCCCCCEEEe---
Confidence            4679999999999999999999999999984433222 22222235566666655544433  56778999999963   


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc--cccchhhhHhHHHHHh
Q 019199           97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA--APLLCAGITVYTPMMR  174 (344)
Q Consensus        97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a--a~l~~~~~ta~~~l~~  174 (344)
                                                         ..+|++|.+++.+.+.|++++.-...+  ..+..+..|||.+|.+
T Consensus       100 -----------------------------------~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~  144 (340)
T COG2130         100 -----------------------------------VSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLD  144 (340)
T ss_pred             -----------------------------------cccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHH
Confidence                                               357999999999999999966544444  3788899999999999


Q ss_pred             ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh----cCCccEEE
Q 019199          175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFII  249 (344)
Q Consensus       175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~dvvi  249 (344)
                      .+..++|++|+|-+| |++|..+.|+||..|+||+.++.++++.+.+.+++|+|.++|++.++....+    .+|+|+.|
T Consensus       145 igqpk~GetvvVSaAaGaVGsvvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~d~~~~L~~a~P~GIDvyf  224 (340)
T COG2130         145 IGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAEDFAQALKEACPKGIDVYF  224 (340)
T ss_pred             hcCCCCCCEEEEEecccccchHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcccHHHHHHHHCCCCeEEEE
Confidence            999999999999987 9999999999999999999999999999999777999999999987654433    48999999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee--------------ee-------chHhHHHHHHHHHhC
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN--------------IG-------GTKDTQEMLEYCAAH  305 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~--------------~~-------~~~~~~~~~~~~~~g  305 (344)
                      |++|++. +...+..|+..+|++.||.-   .+...+..+-.              ..       ..+.++++.+|+++|
T Consensus       225 eNVGg~v-~DAv~~~ln~~aRi~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~G  303 (340)
T COG2130         225 ENVGGEV-LDAVLPLLNLFARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEG  303 (340)
T ss_pred             EcCCchH-HHHHHHhhccccceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcC
Confidence            9999997 99999999999999999965   22212211111              11       125678899999999


Q ss_pred             CCccceEEE-eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          306 KIYPQIETI-PIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       306 ~~~~~~~~~-~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +|+....++ .+|++++||..|.+++++||+|+++.+
T Consensus       304 Ki~~~eti~dGlEnaP~Af~gLl~G~N~GK~vvKv~~  340 (340)
T COG2130         304 KIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVAD  340 (340)
T ss_pred             ceeeEeeehhhhhccHHHHHHHhcCCccceEEEEecC
Confidence            999877544 799999999999999999999999863

>cd05281 TDH Threonine dehydrogenase

Probab=100.00  E-value=4.4e-36  Score=276.62  Aligned_cols=314  Identities=23%  Similarity=0.325  Sum_probs=246.8

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC---CCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++.....+..+.+.+.+.|.|.++|++||+.++++|+.|+..+.+..   .....|.++|||++|+|+.+|++++.+++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~v~~~~~G   82 (341)
T cd05281           3 AIVKTKAGPGAELVEVPVPKPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAGEVVEVGEGVTRVKVG   82 (341)
T ss_pred             ceEEecCCCceEEEeCCCCCCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEEEEEEECCCCCCCCCC
Confidence            45554444578899999999999999999999999999988754421   122356789999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+|+..+.. .|+.|.+|+.++++.|+..  .+.+.     ...|+|++|+.++++.++++|++++.+. ++++..+.++
T Consensus        83 d~V~~~~~~-~~~~~~~~~~~~~~~~~~~--~~~~~-----~~~g~~~~~v~v~~~~~~~lP~~~~~~~-a~~~~~~~~a  153 (341)
T cd05281          83 DYVSAETHI-VCGKCYQCRTGNYHVCQNT--KILGV-----DTDGCFAEYVVVPEENLWKNDKDIPPEI-ASIQEPLGNA  153 (341)
T ss_pred             CEEEECCcc-CCCCChHHHCcCcccCccc--ceEec-----cCCCcceEEEEechHHcEECcCCCCHHH-hhhhhHHHHH
Confidence            999887554 8999999999999999753  23332     2458999999999999999999999854 4566777888


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH--HHHhc--C
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ--MKALG--K  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--~~~~~--~  243 (344)
                      ++++. . ..++|++|+|.|+|.+|++++++|+.+|+ +|+++++++++.+.+ +++|++++++.+..+.  +.+..  +
T Consensus       154 ~~~~~-~-~~~~g~~vlV~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~  230 (341)
T cd05281         154 VHTVL-A-GDVSGKSVLITGCGPIGLMAIAVAKAAGASLVIASDPNPYRLELA-KKMGADVVINPREEDVVEVKSVTDGT  230 (341)
T ss_pred             HHHHH-h-cCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCcceeeCcccccHHHHHHHcCCC
Confidence            88765 3 33789999998889999999999999999 788887777777766 6899988887654332  23322  5


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC--------ceee----eechHhHHHHHHHHHhCCCcc-
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP--------ASLN----IGGTKDTQEMLEYCAAHKIYP-  309 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~--------~~~~----~~~~~~~~~~~~~~~~g~~~~-  309 (344)
                      ++|++||++|+...+..++++|+++|+++.+|.. ....++.        ..+.    ....+.+.++++++.++.+++ 
T Consensus       231 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~  310 (341)
T cd05281         231 GVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGPVDIDLNNLVIFKGLTVQGITGRKMFETWYQVSALLKSGKVDLS  310 (341)
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCCcccccchhhhccceEEEEEecCCcchhHHHHHHHHHcCCCChh
Confidence            7999999998876689999999999999999864 2111111        1111    111356778999999999863 


Q ss_pred             -c-eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          310 -Q-IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       310 -~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                       . .+.+++++++++|+.+.+++ .||+|++
T Consensus       311 ~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~  340 (341)
T cd05281         311 PVITHKLPLEDFEEAFELMRSGK-CGKVVLY  340 (341)
T ss_pred             HheEEEecHHHHHHHHHHHhcCC-CceEEec
Confidence             3 37899999999999999988 8999975

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases

Probab=100.00  E-value=1.1e-35  Score=274.05  Aligned_cols=313  Identities=26%  Similarity=0.452  Sum_probs=251.4

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      ++...+ .+.+.+++.++|+++++||+||+.++++|+.|...+.+... ...|.++|+|++|+|+++|++++.|++||+|
T Consensus         3 a~~~~~-~~~l~~~~~~~~~l~~~~v~v~v~~~~~n~~d~~~~~~~~~-~~~~~~~g~~~~G~V~~~g~~v~~~~~Gd~V   80 (343)
T cd08236           3 ALVLTG-PGDLRYEDIPKPEPGPGEVLVKVKACGICGSDIPRYLGTGA-YHPPLVLGHEFSGTVEEVGSGVDDLAVGDRV   80 (343)
T ss_pred             eEEEec-CCceeEEecCCCCCCCCeEEEEEEEEEECccchHhhcCCCC-CCCCcccCcceEEEEEEECCCCCcCCCCCEE
Confidence            444432 34688888999999999999999999999999988776552 3457889999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      +..+.. .|+.|.+|..|+++.|..+.+  .     +....|+|++|+.++++.++++|+++++.+++.+ ..+.|||++
T Consensus        81 ~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~~~~~~~~~lP~~~~~~~aa~~-~~~~ta~~~  151 (343)
T cd08236          81 AVNPLL-PCGKCEYCKKGEYSLCSNYDY--I-----GSRRDGAFAEYVSVPARNLIKIPDHVDYEEAAMI-EPAAVALHA  151 (343)
T ss_pred             EEcCCC-CCCCChhHHCcChhhCCCcce--E-----ecccCCcccceEEechHHeEECcCCCCHHHHHhc-chHHHHHHH
Confidence            876554 789999999999999987532  1     2234689999999999999999999999999877 577899999


Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHHhc--CCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKALG--KSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~~--~~~d  246 (344)
                      +. ...++++++|+|+|+|.+|++++++|+.+|++ |+++++++++.+.+ +++|++.+++.++..  .+.+..  +++|
T Consensus       152 l~-~~~~~~~~~vlI~g~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d  229 (343)
T cd08236         152 VR-LAGITLGDTVVVIGAGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVA-RELGADDTINPKEEDVEKVRELTEGRGAD  229 (343)
T ss_pred             HH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEecCccccHHHHHHHhCCCCCC
Confidence            87 44569999999998899999999999999996 99998888888777 688998888876543  222222  4699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc----------eee---ee-----chHhHHHHHHHHHhCCC
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA----------SLN---IG-----GTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~----------~~~---~~-----~~~~~~~~~~~~~~g~~  307 (344)
                      +++|++|....+..++++++++|+++.+|.. ....+...          .+.   ..     ..+.++++++++.++.+
T Consensus       230 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l  309 (343)
T cd08236         230 LVIEAAGSPATIEQALALARPGGKVVLVGIPYGDVTLSEEAFEKILRKELTIQGSWNSYSAPFPGDEWRTALDLLASGKI  309 (343)
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCCcccccCCHHHHHhcCcEEEEEeeccccccchhhHHHHHHHHHcCCC
Confidence            9999998766689999999999999999855 22111111          111   11     14568889999999998


Q ss_pred             c--cc-eEEEeCccHHHHHHHHHc-CCcceEEEE
Q 019199          308 Y--PQ-IETIPIENVNEALERLIK-RDVKYRFVI  337 (344)
Q Consensus       308 ~--~~-~~~~~~~~~~~a~~~~~~-~~~~gkvvi  337 (344)
                      .  +. ...+++++++++++.+.+ ....||+|+
T Consensus       310 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~  343 (343)
T cd08236         310 KVEPLITHRLPLEDGPAAFERLADREEFSGKVLL  343 (343)
T ss_pred             ChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence            6  33 378999999999999998 666688874

This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast

>TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase

Probab=100.00  E-value=1e-36  Score=273.10  Aligned_cols=249  Identities=26%  Similarity=0.375  Sum_probs=199.9

Q ss_pred             CcccccceEEEEecCCCC------CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccC--CCCccCCccee
Q 019199           66 VPGHEIVGIVKEVGHNVS------RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA--DGTITKGGYSS  137 (344)
Q Consensus        66 ~~G~e~~G~V~~~G~~~~------~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~--~~~~~~g~~~~  137 (344)
                      ++|||++|+|+++|+.++      +|++||||++.+.. .|++|.+|+.|.++.|++....  +...  .+...+|+|+|
T Consensus         1 v~GHE~~G~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~~~~~~~~~~~G~~ae   77 (280)
T TIGR03366         1 VLGHEIVGEVVALRGGFTPADDGVPLRLGQRVVWSVTV-PCGRCFRCRRGLPQKCDSLRKY--GHEALDSGWPLSGGYAE   77 (280)
T ss_pred             CCCcccceEEEEeCCCccccccCCCCCCCCEEEEcCCC-CCCCChhhhCcCcccCCChhhc--CcccccCCcccccccee
Confidence            589999999999999999      89999999876654 7999999999999999875321  1111  11124699999


Q ss_pred             EEEEecc-eEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCch
Q 019199          138 YIVVHER-YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTS  215 (344)
Q Consensus       138 ~~~~~~~-~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~  215 (344)
                      |+.+|+. .++++|+++++.+++++++.+.|+|+++.+... .+|++|||+|+|++|++++|+||.+|++ |++++++++
T Consensus        78 y~~v~~~~~~~~lP~~~~~~~aa~l~~~~~ta~~al~~~~~-~~g~~VlV~G~G~vG~~~~~~ak~~G~~~Vi~~~~~~~  156 (280)
T TIGR03366        78 HCHLPAGTAIVPVPDDLPDAVAAPAGCATATVMAALEAAGD-LKGRRVLVVGAGMLGLTAAAAAAAAGAARVVAADPSPD  156 (280)
T ss_pred             eEEecCCCcEEECCCCCCHHHhhHhhhHHHHHHHHHHhccC-CCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHH
Confidence            9999997 699999999999999999999999999977765 6999999999999999999999999995 888888888


Q ss_pred             hHHHHHHhCCCcEEEeCCCH-HHHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCceee-
Q 019199          216 KKEEALSLLGADKFVVSSDL-EQMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLN-  288 (344)
Q Consensus       216 ~~~~~~~~~g~~~~v~~~~~-~~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~~~~-  288 (344)
                      |++.+ +++|++.+++..+. +.+.+.+  +++|++||++|.+.+++.++++++++|+++.+|.. .  ..+++...+. 
T Consensus       157 r~~~a-~~~Ga~~~i~~~~~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~i~~~~~~~  235 (280)
T TIGR03366       157 RRELA-LSFGATALAEPEVLAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPGGPVALDPEQVVR  235 (280)
T ss_pred             HHHHH-HHcCCcEecCchhhHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCCCceeeCHHHHHh
Confidence            88887 78999998876543 2233332  57999999999888899999999999999999964 2  2233332222 


Q ss_pred             ---------eechHhHHHHHHHHHhC--CCc--cce-EEEeCccH
Q 019199          289 ---------IGGTKDTQEMLEYCAAH--KIY--PQI-ETIPIENV  319 (344)
Q Consensus       289 ---------~~~~~~~~~~~~~~~~g--~~~--~~~-~~~~~~~~  319 (344)
                               ....++++++++++.++  ++.  +.+ ++||++|+
T Consensus       236 ~~~~i~g~~~~~~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~  280 (280)
T TIGR03366       236 RWLTIRGVHNYEPRHLDQAVRFLAANGQRFPFEELVGKPFPLADV  280 (280)
T ss_pred             CCcEEEecCCCCHHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence                     22346899999999985  443  333 78999864

This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds.

>cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity

Probab=100.00  E-value=7e-36  Score=273.79  Aligned_cols=274  Identities=17%  Similarity=0.191  Sum_probs=220.6

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      +.+++.+.+.|+|++|||+|||.++++|+.|.....+   ...+|.++|+|++|+|++   .+++|++||+|+.      
T Consensus        19 ~~l~~~~~~~p~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G~V~~---~~~~~~~Gd~V~~------   86 (329)
T cd08294          19 SDFELVEEELPPLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAKVIES---KNSKFPVGTIVVA------   86 (329)
T ss_pred             cceEEEecCCCCCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEEEEec---CCCCCCCCCEEEe------
Confidence            5688889999999999999999999999987653221   124578999999999986   4567999999963      


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc---eEEEcCCCCC--c---ccccccchhhhHhHHH
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER---YCYKIANDYP--L---ALAAPLLCAGITVYTP  171 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~---~~~~~P~~~~--~---~~aa~l~~~~~ta~~~  171 (344)
                                                      .++|++|+.++.+   .++++|++++  .   ..++++++++.|||++
T Consensus        87 --------------------------------~~~~~~~~~~~~~~~~~~~~iP~~~~~~~~~~~~~a~~~~~~~ta~~a  134 (329)
T cd08294          87 --------------------------------SFGWRTHTVSDGKDQPDLYKLPADLPDDLPPSLALGVLGMPGLTAYFG  134 (329)
T ss_pred             --------------------------------eCCeeeEEEECCccccceEECCccccccCChHHHHHhcccHHHHHHHH
Confidence                                            1468999999999   9999999998  2   2234688899999999


Q ss_pred             HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hh-cCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---AL-GKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~-~~~~d  246 (344)
                      +.....+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+ +++|+++++++++.+...   +. .+++|
T Consensus       135 l~~~~~~~~g~~vlI~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l-~~~Ga~~vi~~~~~~~~~~v~~~~~~gvd  213 (329)
T cd08294         135 LLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWL-KELGFDAVFNYKTVSLEEALKEAAPDGID  213 (329)
T ss_pred             HHHhcCCCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHCCCCcE
Confidence            977777799999999986 9999999999999999999999999998888 679999999987654332   22 36799


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCC---Ccccc---CCc---------eee--e-ec-----hHhHHHHHHHHH
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKF---SPA---------SLN--I-GG-----TKDTQEMLEYCA  303 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~---~~~---------~~~--~-~~-----~~~~~~~~~~~~  303 (344)
                      ++||++|+.. +..++++++++|+++.+|..   .....   ..+         .+.  . ..     .+.++++++++.
T Consensus       214 ~vld~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~  292 (329)
T cd08294         214 CYFDNVGGEF-SSTVLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIK  292 (329)
T ss_pred             EEEECCCHHH-HHHHHHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHH
Confidence            9999999854 99999999999999999853   11000   000         111  1 11     123677889999


Q ss_pred             hCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          304 AHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       304 ~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++.+++.. .+|+++++++|++.+.+++..||+|+++
T Consensus       293 ~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~  329 (329)
T cd08294         293 EGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV  329 (329)
T ss_pred             CCCCcCCcccccCHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            99998754 6799999999999999999899999864

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac

>cd08234 threonine_DH_like L-threonine dehydrogenase

Probab=100.00  E-value=1.4e-35  Score=272.37  Aligned_cols=313  Identities=27%  Similarity=0.410  Sum_probs=253.6

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++... .++.+.+.+++.|++.++||+||+.++++|+.|.....|..+. .+|.++|+|++|+|+++|+++++|++||+
T Consensus         2 ~a~~~~-~~~~~~~~~~~~~~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G~v~~vG~~v~~~~~Gd~   79 (334)
T cd08234           2 KALVYE-GPGELEVEEVPVPEPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAGVVVAVGSKVTGFKVGDR   79 (334)
T ss_pred             eeEEec-CCCceEEEeccCCCCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEEEEEEeCCCCCCCCCCCE
Confidence            355554 3457888999999999999999999999999999888876642 36789999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |+..+.. .|++|.+|..++.+.|.....  .     |....|++++|+.++.+.++++|+++++.+++.+ ..+.++++
T Consensus        80 V~~~~~~-~~~~~~~~~~~~~~~~~~~~~--~-----~~~~~g~~~~~~~v~~~~~~~lP~~~~~~~aa~~-~~~~~a~~  150 (334)
T cd08234          80 VAVDPNI-YCGECFYCRRGRPNLCENLTA--V-----GVTRNGGFAEYVVVPAKQVYKIPDNLSFEEAALA-EPLSCAVH  150 (334)
T ss_pred             EEEcCCc-CCCCCccccCcChhhCCCcce--e-----ccCCCCcceeEEEecHHHcEECcCCCCHHHHhhh-hHHHHHHH
Confidence            9876554 599999999999999987631  1     1124589999999999999999999999998765 67788898


Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH--HHh-cCCcc
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQM--KAL-GKSLD  246 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--~~~-~~~~d  246 (344)
                      ++ ....+++|++++|+|+|.+|++++++|+..|++ |+++++++++.+.+ +++|.+.+++....+..  +.. .+++|
T Consensus       151 ~l-~~~~~~~g~~vlI~g~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~vd  228 (334)
T cd08234         151 GL-DLLGIKPGDSVLVFGAGPIGLLLAQLLKLNGASRVTVAEPNEEKLELA-KKLGATETVDPSREDPEAQKEDNPYGFD  228 (334)
T ss_pred             HH-HhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCeEEecCCCCCHHHHHHhcCCCCc
Confidence            88 555669999999998899999999999999997 88888888888887 68898888876543321  122 36799


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCce-------ee--eechHhHHHHHHHHHhCCCcc---ce
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPAS-------LN--IGGTKDTQEMLEYCAAHKIYP---QI  311 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~-------~~--~~~~~~~~~~~~~~~~g~~~~---~~  311 (344)
                      +++|+++....+..++++++++|+++.+|...   ...+..+.       +.  ....+.++++++++.++++++   ..
T Consensus       229 ~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~  308 (334)
T cd08234         229 VVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPDARVSISPFEIFQKELTIIGSFINPYTFPRAIALLESGKIDVKGLVS  308 (334)
T ss_pred             EEEECCCChHHHHHHHHHHhcCCEEEEEecCCCCCCcccCHHHHHhCCcEEEEeccCHHHHHHHHHHHHcCCCChhhhEE
Confidence            99999987666899999999999999998651   22222221       11  223467889999999999874   24


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      .+|++++++++++.+.+ ...+|+|+
T Consensus       309 ~~~~~~~~~~a~~~~~~-~~~~k~vi  333 (334)
T cd08234         309 HRLPLEEVPEALEGMRS-GGALKVVV  333 (334)
T ss_pred             EEecHHHHHHHHHHHhc-CCceEEEe
Confidence            78999999999999998 77899886

L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose.

>TIGR00692 tdh L-threonine 3-dehydrogenase

Probab=100.00  E-value=1.8e-35  Score=272.44  Aligned_cols=310  Identities=22%  Similarity=0.296  Sum_probs=245.2

Q ss_pred             CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC---CCCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199           17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH---GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~---~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      .+...+++++.++|.|.++||+||+.++++|+.|+..+.+..   ....+|.++|||++|+|+++|+++++|++||+|+.
T Consensus         6 ~~~~~~~l~~~~~p~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~   85 (340)
T TIGR00692         6 KPGYGAELTEVPVPEPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAGEVVGIGPGVEGIKVGDYVSV   85 (340)
T ss_pred             cCCCCcEEEECCCCCCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEEEEEEECCCCCcCCCCCEEEE
Confidence            455668888999999999999999999999999988765431   12235678999999999999999999999999977


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHH
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM  173 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  173 (344)
                      .+. +.|++|..|..+.++.|++.+..  +     ....|+|++|+.++++.++++|++++..++ +++..+.+|++++.
T Consensus        86 ~~~-~~~~~~~~~~~~~~~~~~~~~~~--~-----~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a-~~~~~~~~a~~~~~  156 (340)
T TIGR00692        86 ETH-IVCGKCYACRRGQYHVCQNTKIF--G-----VDTDGCFAEYAVVPAQNIWKNPKSIPPEYA-TIQEPLGNAVHTVL  156 (340)
T ss_pred             CCc-CCCCCChhhhCcChhhCcCcceE--e-----ecCCCcceeEEEeehHHcEECcCCCChHhh-hhcchHHHHHHHHH
Confidence            654 48999999999999999986321  1     124589999999999999999999998554 56778888888762


Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh--cCCccE
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDF  247 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~dv  247 (344)
                        ...++|++++|.|+|++|++++++++.+|++ |+++++++++.+.+ +++|++.+++....+.   +.+.  .+++|+
T Consensus       157 --~~~~~g~~vlI~~~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~v~~~~~~~~~~l~~~~~~~~~d~  233 (340)
T TIGR00692       157 --AGPISGKSVLVTGAGPIGLMAIAVAKASGAYPVIVSDPNEYRLELA-KKMGATYVVNPFKEDVVKEVADLTDGEGVDV  233 (340)
T ss_pred             --ccCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCcEEEcccccCHHHHHHHhcCCCCCCE
Confidence              3357899999988899999999999999996 88886666677666 6889988887755433   2233  257999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC--------ceee--e--echHhHHHHHHHHHhCCCc--cc-e
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP--------ASLN--I--GGTKDTQEMLEYCAAHKIY--PQ-I  311 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~--------~~~~--~--~~~~~~~~~~~~~~~g~~~--~~-~  311 (344)
                      ++|++++...+...+++++++|+++.+|.. ....++.        ..+.  .  ...+.+.++++++.++.++  +. +
T Consensus       234 vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~  313 (340)
T TIGR00692       234 FLEMSGAPKALEQGLQAVTPGGRVSLLGLPPGKVTIDFTNKVIFKGLTIYGITGRHMFETWYTVSRLIQSGKLDLDPIIT  313 (340)
T ss_pred             EEECCCCHHHHHHHHHhhcCCCEEEEEccCCCCcccchhhhhhhcceEEEEEecCCchhhHHHHHHHHHcCCCChHHhee
Confidence            999998766689999999999999999865 2111111        1111  1  1224578899999999986  33 4


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.++++++.++++.+.+++ .||+|+++
T Consensus       314 ~~~~l~~~~~a~~~~~~~~-~gkvvv~~  340 (340)
T TIGR00692       314 HKFKFDKFEKGFELMRSGQ-TGKVILSL  340 (340)
T ss_pred             eeeeHHHHHHHHHHHhcCC-CceEEEeC
Confidence            8999999999999998877 59999864

E. coli His-90 modulates substrate specificity and is believed part of the active site.

>TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein

Probab=100.00  E-value=1.1e-35  Score=273.34  Aligned_cols=289  Identities=22%  Similarity=0.326  Sum_probs=234.1

Q ss_pred             CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199           17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY   96 (344)
Q Consensus        17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~   96 (344)
                      +.++.++..+.|.|+|.++||+||+.++++|+.|...+.+..+...+|.++|||++|+|+++|++++.|++||+|+....
T Consensus        12 ~~~~~~~~~~~~~p~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~~~   91 (336)
T TIGR02817        12 TDPDALVDIDLPKPKPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAGVVVAVGDEVTLFKPGDEVWYAGD   91 (336)
T ss_pred             CCcccceecccCCCCCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEEEEEEeCCCCCCCCCCCEEEEcCC
Confidence            44667888899999999999999999999999999888776554456889999999999999999999999999974210


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199           97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK  176 (344)
Q Consensus        97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~  176 (344)
                                                      ....|+|++|+.++++.++++|+++++.+++.+++++.|||+++....
T Consensus        92 --------------------------------~~~~g~~~~~~~v~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~  139 (336)
T TIGR02817        92 --------------------------------IDRPGSNAEFHLVDERIVGHKPKSLSFAEAAALPLTSITAWELLFDRL  139 (336)
T ss_pred             --------------------------------CCCCCcccceEEEcHHHcccCCCCCCHHHHhhhhHHHHHHHHHHHHhc
Confidence                                            013589999999999999999999999999999999999999987777


Q ss_pred             CCCC-----CCEEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc-CCcc
Q 019199          177 MNQP-----GKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-KSLD  246 (344)
Q Consensus       177 ~~~~-----g~~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~-~~~d  246 (344)
                      .+++     |++|||+|+ |++|++++|+|+.+ |++|+++++++++.+.+ +++|+++++++...  ..+.+.. +++|
T Consensus       140 ~~~~~~~~~g~~vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l-~~~g~~~~~~~~~~~~~~i~~~~~~~vd  218 (336)
T TIGR02817       140 GINDPVAGDKRALLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWV-LELGAHHVIDHSKPLKAQLEKLGLEAVS  218 (336)
T ss_pred             CCCCCCCCCCCEEEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHH-HHcCCCEEEECCCCHHHHHHHhcCCCCC
Confidence            6666     999999987 99999999999998 99999999998888888 68999999885431  2233333 5799


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCC-----ceee---ee------------chHhHHHHHHHHHhCC
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP-----ASLN---IG------------GTKDTQEMLEYCAAHK  306 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~-----~~~~---~~------------~~~~~~~~~~~~~~g~  306 (344)
                      +++|++++......++++++++|+++.++.........     ..+.   ..            ..+.++++++++.++.
T Consensus       219 ~vl~~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  298 (336)
T TIGR02817       219 YVFSLTHTDQHFKEIVELLAPQGRFALIDDPAELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGK  298 (336)
T ss_pred             EEEEcCCcHHHHHHHHHHhccCCEEEEEcccccccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCC
Confidence            99999876556999999999999999886431111110     1111   00            0145788999999999


Q ss_pred             Cccce-EEE---eCccHHHHHHHHHcCCcceEEEEE
Q 019199          307 IYPQI-ETI---PIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       307 ~~~~~-~~~---~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++.+ +.+   +++++++|++.+.+++..||+++.
T Consensus       299 l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~  334 (336)
T TIGR02817       299 IRTTLAETFGTINAANLKRAHALIESGKARGKIVLE  334 (336)
T ss_pred             eeccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence            98653 455   468999999999999888999875

Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model.

>PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional

Probab=100.00  E-value=1.8e-35  Score=270.90  Aligned_cols=296  Identities=22%  Similarity=0.296  Sum_probs=243.1

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ||+.+.+...+.+..+++++++.|.|+++||+||+.++|+|++|+....|..+...+|.++|||++|+|+.+|++++.++
T Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~   80 (327)
T PRK10754          1 MAKRIEFHKHGGPEVLQAVEFTPADPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAGVVSKVGSGVKHIK   80 (327)
T ss_pred             CceEEEEeccCChhHeEEeeccCCCCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEEEEEEeCCCCCCCC
Confidence            46666666555667889999999999999999999999999999988877665455688999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+...                                  ...|+|++|+.++.+.++++|+++++.+++.+++...
T Consensus        81 ~Gd~V~~~~----------------------------------~~~g~~~~~v~v~~~~~~~lp~~~~~~~~~~~~~~~~  126 (327)
T PRK10754         81 VGDRVVYAQ----------------------------------SALGAYSSVHNVPADKAAILPDAISFEQAAASFLKGL  126 (327)
T ss_pred             CCCEEEECC----------------------------------CCCcceeeEEEcCHHHceeCCCCCCHHHHHHHHHHHH
Confidence            999996321                                  1247899999999999999999999999999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG  242 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~  242 (344)
                      |||.++.....+++|++|+|+|+ |.+|++++++++.+|++|+.+++++++.+.+ +++|++++++.+..+.   +.+..
T Consensus       127 ta~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~  205 (327)
T PRK10754        127 TVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRA-KKAGAWQVINYREENIVERVKEIT  205 (327)
T ss_pred             HHHHHHHhhcCCCCCCEEEEEeCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEEcCCCCcHHHHHHHHc
Confidence            99999888777899999999976 9999999999999999999999999888888 6899988887765433   23332


Q ss_pred             --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-c---cccCCce----ee---------eec----hHhHHHHH
Q 019199          243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-K---VKFSPAS----LN---------IGG----TKDTQEML  299 (344)
Q Consensus       243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~---~~~~~~~----~~---------~~~----~~~~~~~~  299 (344)
                        +++|+++|++++.. ...++++++++|+++.+|... .   ..+....    ..         ...    .+.++.++
T Consensus       206 ~~~~~d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (327)
T PRK10754        206 GGKKVRVVYDSVGKDT-WEASLDCLQRRGLMVSFGNASGPVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELF  284 (327)
T ss_pred             CCCCeEEEEECCcHHH-HHHHHHHhccCCEEEEEccCCCCCCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHH
Confidence              57999999999865 889999999999999998541 1   1111100    10         011    12356688


Q ss_pred             HHHHhCCCccc---eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          300 EYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       300 ~~~~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++.+|.+++.   ++.|++++++++++.+.+++..+|+||.
T Consensus       285 ~~l~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  326 (327)
T PRK10754        285 SLIASGVIKVDVAEQQKFPLKDAQRAHEILESRATQGSSLLI  326 (327)
T ss_pred             HHHHCCCeeeecccCcEEcHHHHHHHHHHHHcCCCcceEEEe
Confidence            99999999753   4899999999999999998888999985

>KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only]

Probab=100.00  E-value=5e-35  Score=265.61  Aligned_cols=286  Identities=25%  Similarity=0.334  Sum_probs=228.4

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCC----CCCCCcccccceEEEEecCC----CCCCCCCC
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS----KYPLVPGHEIVGIVKEVGHN----VSRFKVGD   89 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~----~~p~~~G~e~~G~V~~~G~~----~~~~~~Gd   89 (344)
                      ++.....++.++|.|.+++++|++.++++|+.|..++.|.....    .+|.+++.++.|++...++.    +..+..||
T Consensus        16 ~~~~~~~~~~~iP~~~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~~~~~~~g~~~~~~~~~g~   95 (347)
T KOG1198|consen   16 GGEVLFSEEVPIPEPEDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVVGAVESVGDDVVGGWVHGD   95 (347)
T ss_pred             CcceEEeecccCCCCCCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCceeEEeccccccccceEeee
Confidence            34445568899999999999999999999999999998876532    46766666666654333332    23455565


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      .+...                                   ...|+|+||+++|+..++++|+++++.+||+++.++.|||
T Consensus        96 ~~~~~-----------------------------------~~~g~~aey~v~p~~~~~~~P~~l~~~~aa~~p~~~~tA~  140 (347)
T KOG1198|consen   96 AVVAF-----------------------------------LSSGGLAEYVVVPEKLLVKIPESLSFEEAAALPLAALTAL  140 (347)
T ss_pred             EEeec-----------------------------------cCCCceeeEEEcchhhccCCCCccChhhhhcCchHHHHHH
Confidence            55322                                   3569999999999999999999999999999999999999


Q ss_pred             HHHHhcc------CCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-
Q 019199          170 TPMMRHK------MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-  241 (344)
Q Consensus       170 ~~l~~~~------~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-  241 (344)
                      .++....      .+++|++|||+|+ |++|++++|+|+..++..++++.++++.+.+ +++|+++++|+++++..++. 
T Consensus       141 ~al~~~~~~~~~~~~~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~-k~lGAd~vvdy~~~~~~e~~k  219 (347)
T KOG1198|consen  141 SALFQLAPGKRSKKLSKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELV-KKLGADEVVDYKDENVVELIK  219 (347)
T ss_pred             HHHHhccccccccccCCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHH-HHcCCcEeecCCCHHHHHHHH
Confidence            9999999      8899999999987 9999999999999996556666677777777 79999999999998766554 


Q ss_pred             ---cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC----CccccC----------Cceee-----------eechH
Q 019199          242 ---GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP----SKVKFS----------PASLN-----------IGGTK  293 (344)
Q Consensus       242 ---~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~----~~~~~~----------~~~~~-----------~~~~~  293 (344)
                         .++||+||||+|+.. ....+.++...|+...++..    .+....          .+...           ....+
T Consensus       220 k~~~~~~DvVlD~vg~~~-~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (347)
T KOG1198|consen  220 KYTGKGVDVVLDCVGGST-LTKSLSCLLKGGGGAYIGLVGDELANYKLDDLWQSANGIKLYSLGLKGVNYRWLYFVPSAE  298 (347)
T ss_pred             hhcCCCccEEEECCCCCc-cccchhhhccCCceEEEEeccccccccccccchhhhhhhhheeeeeeccceeeeeecCCHH
Confidence               358999999999975 78888888888865555433    111111          00000           33457


Q ss_pred             hHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          294 DTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       294 ~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      .++.+.+++++++++|.+ +.||++++.+|++++.+++..||+++++.
T Consensus       299 ~l~~l~~~ie~gkikp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~  346 (347)
T KOG1198|consen  299 YLKALVELIEKGKIKPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKD  346 (347)
T ss_pred             HHHHHHHHHHcCcccCCcceeeeHHHHHHHHHHHhhcCCcceEEEEec
Confidence            899999999999999987 89999999999999999999999999875

>PTZ00354 alcohol dehydrogenase; Provisional

Probab=100.00  E-value=2e-34  Score=264.43  Aligned_cols=300  Identities=25%  Similarity=0.354  Sum_probs=242.4

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      |||+..+...+....+++.+.+.|++.++||+||+.++++|+.|.....+..+ ....|.++|||++|+|+++|+.++.+
T Consensus         1 ~m~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~   80 (334)
T PTZ00354          1 MMRAVTLKGFGGVDVLKIGESPKPAPKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAGYVEDVGSDVKRF   80 (334)
T ss_pred             CcEEEEEEecCCCcceEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEeCCCCCCC
Confidence            45655555444444567777788889999999999999999999888876543 23456789999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||+|+.+.                                   ..|++++|+.++.+.++++|++++..+++.+++.+
T Consensus        81 ~~Gd~V~~~~-----------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~  125 (334)
T PTZ00354         81 KEGDRVMALL-----------------------------------PGGGYAEYAVAHKGHVMHIPQGYTFEEAAAIPEAF  125 (334)
T ss_pred             CCCCEEEEec-----------------------------------CCCceeeEEEecHHHcEeCCCCCCHHHHHHHHHHH
Confidence            9999997431                                   23889999999999999999999999999999999


Q ss_pred             hHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH-H---HHH
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE-Q---MKA  240 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~---~~~  240 (344)
                      .|||+++.....+++|++|+|+|+ |.+|++++++|+.+|++++++++++++.+.+ +++|++.+++....+ .   +.+
T Consensus       126 ~ta~~~l~~~~~~~~~~~vlI~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~  204 (334)
T PTZ00354        126 LTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKVDFC-KKLAAIILIRYPDEEGFAPKVKK  204 (334)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChhHHHHHHHH
Confidence            999999988777799999999996 9999999999999999988888888888888 679998888876543 2   222


Q ss_pred             hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc---cCCce-------ee---eec-h---------HhH
Q 019199          241 LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK---FSPAS-------LN---IGG-T---------KDT  295 (344)
Q Consensus       241 ~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~---~~~~~-------~~---~~~-~---------~~~  295 (344)
                      ..  +++|++||++++.. +..++++++++|+++.+|......   ++...       +.   ... .         +.+
T Consensus       205 ~~~~~~~d~~i~~~~~~~-~~~~~~~l~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (334)
T PTZ00354        205 LTGEKGVNLVLDCVGGSY-LSETAEVLAVDGKWIVYGFMGGAKVEKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFE  283 (334)
T ss_pred             HhCCCCceEEEECCchHH-HHHHHHHhccCCeEEEEecCCCCcccccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHH
Confidence            22  57999999998764 899999999999999998652212   22111       11   011 0         234


Q ss_pred             HHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          296 QEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       296 ~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                      +++++++.++.+.+.+ +.+++++++++++.+.+++..+|+++.+.+++
T Consensus       284 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~kvvv~~~~~~  332 (334)
T PTZ00354        284 REVLPYMEEGEIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTVNEPL  332 (334)
T ss_pred             HHHHHHHHCCCccCccccEEcHHHHHHHHHHHHhCCCCceEEEecCCCC
Confidence            6788899999988754 88999999999999998887899999988765

>cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases

Probab=100.00  E-value=3.1e-34  Score=262.30  Aligned_cols=298  Identities=24%  Similarity=0.307  Sum_probs=231.1

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++.++..++++.++++++.+.|.+.+++|+||+.++++|++|+....|..+ ...+|.++|||++|+|+++  .++.|++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~--~~~~~~~   79 (325)
T cd05280           2 KALVVEEQDGGVSLFLRTLPLDDLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAGTVVSS--DDPRFRE   79 (325)
T ss_pred             ceEEEcccCCCCcceEEeCCCCCCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEEEEEEe--CCCCCCC
Confidence            444444433334788999999999999999999999999999988877653 2345788999999999998  4568999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+..+..                             .|....|+|++|+.++++.++++|+++++.+++.+++.+.|
T Consensus        80 Gd~V~~~~~~-----------------------------~g~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~t  130 (325)
T cd05280          80 GDEVLVTGYD-----------------------------LGMNTDGGFAEYVRVPADWVVPLPEGLSLREAMILGTAGFT  130 (325)
T ss_pred             CCEEEEcccc-----------------------------cCCCCCceeEEEEEEchhhEEECCCCCCHHHHHhhHHHHHH
Confidence            9999753210                             01123589999999999999999999999999999999999


Q ss_pred             hHHHHHhccCC--C-CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHHh
Q 019199          168 VYTPMMRHKMN--Q-PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKAL  241 (344)
Q Consensus       168 a~~~l~~~~~~--~-~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~~  241 (344)
                      |+.++....+.  + .+++|+|+|+ |.+|++++++|+.+|++|+++++++++++.+ +++|++.+++..+..  ..+..
T Consensus       131 a~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  209 (325)
T cd05280         131 AALSVHRLEDNGQTPEDGPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYL-KSLGASEVLDREDLLDESKKPL  209 (325)
T ss_pred             HHHHHHHHhhccCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEcchhHHHHHHHHh
Confidence            99988665432  4 4579999998 9999999999999999999999999998888 689999888876532  12222


Q ss_pred             -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee----------ee--c----hHhHHHHHHHH
Q 019199          242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN----------IG--G----TKDTQEMLEYC  302 (344)
Q Consensus       242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~----------~~--~----~~~~~~~~~~~  302 (344)
                       .+++|++||++++.. +..++++++++|+++.+|..  ....++...+.          ..  .    .+.++.+.+++
T Consensus       210 ~~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (325)
T cd05280         210 LKARWAGAIDTVGGDV-LANLLKQTKYGGVVASCGNAAGPELTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEW  288 (325)
T ss_pred             cCCCccEEEECCchHH-HHHHHHhhcCCCEEEEEecCCCCccccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHH
Confidence             257999999999865 99999999999999999865  11222222221          11  0    12334455555


Q ss_pred             HhCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          303 AAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       303 ~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ..+...+.+.+|++++++++++.+.+++..||+|+++
T Consensus       289 ~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gk~vv~~  325 (325)
T cd05280         289 KPDLLEIVVREISLEELPEAIDRLLAGKHRGRTVVKI  325 (325)
T ss_pred             hcCCccceeeEecHHHHHHHHHHHhcCCcceEEEEeC
Confidence            5664444558999999999999999999899999864

Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so

>cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.9e-34  Score=262.72  Aligned_cols=306  Identities=25%  Similarity=0.353  Sum_probs=244.8

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY   96 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~   96 (344)
                      ....+++++.+.|.++++|++|++.++++|++|+....|..+ ....|.++|||++|+|+++|+++++|++||+|+..+.
T Consensus        11 ~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~   90 (336)
T cd08276          11 GLDNLKLVEEPVPEPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAGEVVAVGEGVTRFKVGDRVVPTFF   90 (336)
T ss_pred             CCcceEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeEEEEEeCCCCcCCCCCCEEEEecc
Confidence            346677888888889999999999999999999988877653 2346788999999999999999999999999987543


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199           97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK  176 (344)
Q Consensus        97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~  176 (344)
                      . .|+.      +....|...  .+     +|...+|+|++|+.++.+.++++|+++++.+++.+++.+.+||+++....
T Consensus        91 ~-~~~~------~~~~~~~~~--~~-----~~~~~~g~~~~~~~~~~~~~~~lp~~~~~~~a~~~~~~~~~a~~~l~~~~  156 (336)
T cd08276          91 P-NWLD------GPPTAEDEA--SA-----LGGPIDGVLAEYVVLPEEGLVRAPDHLSFEEAATLPCAGLTAWNALFGLG  156 (336)
T ss_pred             c-cccc------ccccccccc--cc-----cccccCceeeeEEEecHHHeEECCCCCCHHHhhhhhHHHHHHHHHHHhhc
Confidence            2 3333      333444322  11     12234689999999999999999999999999999999999999998877


Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HH---HHHHhc--CCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LE---QMKALG--KSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~---~~~~~~--~~~dvvid  250 (344)
                      .+++|++|+|+|+|++|++++++++.+|++|++++.++++.+.+ +++|.+.+++... .+   .+.+..  +++|+++|
T Consensus       157 ~~~~g~~vli~g~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~  235 (336)
T cd08276         157 PLKPGDTVLVQGTGGVSLFALQFAKAAGARVIATSSSDEKLERA-KALGADHVINYRTTPDWGEEVLKLTGGRGVDHVVE  235 (336)
T ss_pred             CCCCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEcCCcccCHHHHHHHHcCCCCCcEEEE
Confidence            78999999999889999999999999999999999998888888 4689988887654 32   233333  57999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCCCc--cccCCce-------ee---eechHhHHHHHHHHHhCCCccc-eEEEeCc
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSPAS-------LN---IGGTKDTQEMLEYCAAHKIYPQ-IETIPIE  317 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~~~-------~~---~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~  317 (344)
                      +++... +..++++++++|+++.+|....  .......       +.   ....+.++++++++.++.+.+. ++.|+++
T Consensus       236 ~~~~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~  314 (336)
T cd08276         236 VGGPGT-LAQSIKAVAPGGVISLIGFLSGFEAPVLLLPLLTKGATLRGIAVGSRAQFEAMNRAIEAHRIRPVIDRVFPFE  314 (336)
T ss_pred             CCChHH-HHHHHHhhcCCCEEEEEccCCCCccCcCHHHHhhcceEEEEEecCcHHHHHHHHHHHHcCCcccccCcEEeHH
Confidence            998654 8999999999999999986511  1111111       11   2335678999999999988765 4899999


Q ss_pred             cHHHHHHHHHcCCcceEEEEEe
Q 019199          318 NVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       318 ~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +++++++.+.+++..+|+++++
T Consensus       315 ~~~~a~~~~~~~~~~~kvv~~~  336 (336)
T cd08276         315 EAKEAYRYLESGSHFGKVVIRV  336 (336)
T ss_pred             HHHHHHHHHHhCCCCceEEEeC
Confidence            9999999999988889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08290 ETR 2-enoyl thioester reductase (ETR)

Probab=100.00  E-value=1.3e-34  Score=266.89  Aligned_cols=283  Identities=23%  Similarity=0.263  Sum_probs=230.9

Q ss_pred             CccceeeccCCCCC-CcEEEEEeeeecccchhhhhcCCCCCC-C----CCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199           21 VLSPYSFNRRAVGS-DDVSITITHCGVCYADVIWTRNKHGDS-K----YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG   94 (344)
Q Consensus        21 ~~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g~~~~~-~----~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~   94 (344)
                      .+.+++.+.|+|.+ ++|+||+.++|+|++|.....|..+.. .    .|.++|||++|+|+++|+++..|++||+|+..
T Consensus        15 ~~~~~~~~~p~~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   94 (341)
T cd08290          15 VLQLESYEIPPPGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVGEVVKVGSGVKSLKPGDWVIPL   94 (341)
T ss_pred             heEEeecCCCCCCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEEEEEEeCCCCCCCCCCCEEEec
Confidence            37888999999887 999999999999999998887765421 2    57789999999999999999999999999753


Q ss_pred             ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199           95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR  174 (344)
Q Consensus        95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  174 (344)
                      +                                  ...|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++..
T Consensus        95 ~----------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~~ta~~~l~~  140 (341)
T cd08290          95 R----------------------------------PGLGTWRTHAVVPADDLIKVPNDVDPEQAATLSVNPCTAYRLLED  140 (341)
T ss_pred             C----------------------------------CCCccchheEeccHHHeEeCCCCCCHHHHHHhhccHHHHHHHHHh
Confidence            2                                  124889999999999999999999999999999999999999977


Q ss_pred             ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHHHhCCCcEEEeCCCH---HH---HHHhc-
Q 019199          175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----SKKEEALSLLGADKFVVSSDL---EQ---MKALG-  242 (344)
Q Consensus       175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----~~~~~~~~~~g~~~~v~~~~~---~~---~~~~~-  242 (344)
                      ...+++|++|||+|+ |++|++++++|++.|++|+++++++    ++.+.+ +++|++++++.+..   ..   +.... 
T Consensus       141 ~~~~~~g~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~i~~~~~  219 (341)
T cd08290         141 FVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERL-KALGADHVLTEEELRSLLATELLKSAPG  219 (341)
T ss_pred             hcccCCCCEEEEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHH-HhcCCCEEEeCcccccccHHHHHHHHcC
Confidence            777799999999987 9999999999999999998888776    567777 67999998887653   22   22222 


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCc-------eee---e------ech----HhHHHHHH
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPA-------SLN---I------GGT----KDTQEMLE  300 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~-------~~~---~------~~~----~~~~~~~~  300 (344)
                      +++|++||++|+.. +..++++++++|+++.+|..  ....++..       .+.   .      ...    ..++++++
T Consensus       220 ~~~d~vld~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  298 (341)
T cd08290         220 GRPKLALNCVGGKS-ATELARLLSPGGTMVTYGGMSGQPVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAE  298 (341)
T ss_pred             CCceEEEECcCcHh-HHHHHHHhCCCCEEEEEeccCCCCcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHH
Confidence            37999999999875 77899999999999999854  11112211       111   0      111    24778899


Q ss_pred             HHHhCCCccce-EEE---eCccHHHHHHHHHcCCcceEEEEEe
Q 019199          301 YCAAHKIYPQI-ETI---PIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       301 ~~~~g~~~~~~-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++.++.+.+.. ..+   ++++++++++.+.+++..||+|+.+
T Consensus       299 ~~~~~~l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~  341 (341)
T cd08290         299 LIREGKLKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM  341 (341)
T ss_pred             HHHcCCccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence            99999998754 677   9999999999999988889999864

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f

>cd08244 MDR_enoyl_red Possible enoyl reductase

Probab=100.00  E-value=2.9e-34  Score=262.44  Aligned_cols=284  Identities=24%  Similarity=0.302  Sum_probs=231.3

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT   95 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~   95 (344)
                      ...+++.+.+.|.+.+++|+|++.++++|++|+....|..+   ...+|.++|||++|+|+++|+.++.+++||+|+..+
T Consensus        12 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~   91 (324)
T cd08244          12 PEVLVPEDVPDPVPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAGVVDAVGPGVDPAWLGRRVVAHT   91 (324)
T ss_pred             ccceEEeccCCCCCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEEEEEEeCCCCCCCCCCCEEEEcc
Confidence            44566667777778999999999999999999988877543   235578899999999999999999999999997532


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc
Q 019199           96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH  175 (344)
Q Consensus        96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~  175 (344)
                      .                                 ...|+|++|+.++...++++|+++++.+++.+++.+.||| ++...
T Consensus        92 ~---------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~a~~~~~~~~ta~-~~~~~  137 (324)
T cd08244          92 G---------------------------------RAGGGYAELAVADVDSLHPVPDGLDLEAAVAVVHDGRTAL-GLLDL  137 (324)
T ss_pred             C---------------------------------CCCceeeEEEEEchHHeEeCCCCCCHHHHhhhcchHHHHH-HHHHh
Confidence            0                                 1258899999999999999999999999999999999995 44455


Q ss_pred             cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---hc--CCccEEE
Q 019199          176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---LG--KSLDFII  249 (344)
Q Consensus       176 ~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~--~~~dvvi  249 (344)
                      ..++++++|+|+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++.+++.++.+....   ..  +++|+++
T Consensus       138 ~~~~~~~~vlI~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl  216 (324)
T cd08244         138 ATLTPGDVVLVTAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALV-RALGADVAVDYTRPDWPDQVREALGGGGVTVVL  216 (324)
T ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHcCCCCceEEE
Confidence            66799999999996 9999999999999999999999999988888 7899988888766443222   22  5799999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc-------eee---e--e----chHhHHHHHHHHHhCCCccce
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA-------SLN---I--G----GTKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~--~----~~~~~~~~~~~~~~g~~~~~~  311 (344)
                      |++|+.. ...++++++++|+++.+|...  ...++..       .+.   .  .    ..+.++++++++.++.+.+.+
T Consensus       217 ~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  295 (324)
T cd08244         217 DGVGGAI-GRAALALLAPGGRFLTYGWASGEWTALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVV  295 (324)
T ss_pred             ECCChHh-HHHHHHHhccCcEEEEEecCCCCCCccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCcc
Confidence            9999886 799999999999999998651  1122211       111   0  0    125677889999999997655


Q ss_pred             -EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          312 -ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                       +.|+++++++|++.+.+++..||+++.
T Consensus       296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (324)
T cd08244         296 GQTFPLERAAEAHAALEARSTVGKVLLL  323 (324)
T ss_pred             ceEEeHHHHHHHHHHHHcCCCCceEEEe
Confidence             899999999999999998888999985

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr

>cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.3e-34  Score=259.87  Aligned_cols=275  Identities=24%  Similarity=0.328  Sum_probs=227.8

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      +..+++++.+.|.+.++||+||+.++++|+.|+....+    ...|.++|||++|+|+++|+.++.|++||+|+...   
T Consensus        11 ~~~~~~~~~~~p~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~---   83 (305)
T cd08270          11 PLRLRLGEVPDPQPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAGVVERAAADGSGPAVGARVVGLG---   83 (305)
T ss_pred             CceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec---
Confidence            55677778899999999999999999999999877652    12357899999999999999999999999997421   


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (344)
                                                      ..|+|++|+.++.+.++++|+++++.+++.+++.+.|||+++......
T Consensus        84 --------------------------------~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~ta~~~~~~~~~~  131 (305)
T cd08270          84 --------------------------------AMGAWAELVAVPTGWLAVLPDGVSFAQAATLPVAGVTALRALRRGGPL  131 (305)
T ss_pred             --------------------------------CCcceeeEEEEchHHeEECCCCCCHHHHHHhHhHHHHHHHHHHHhCCC
Confidence                                            248999999999999999999999999999999999999999888774


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                       +|++|+|+|+ |++|++++++++.+|++|+.+++++++.+.+ +++|++..++... +   ...+++|+++|++|+.. 
T Consensus       132 -~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~-~---~~~~~~d~vl~~~g~~~-  204 (305)
T cd08270         132 -LGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEGL-RELGAAEVVVGGS-E---LSGAPVDLVVDSVGGPQ-  204 (305)
T ss_pred             -CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEeccc-c---ccCCCceEEEECCCcHH-
Confidence             5999999998 9999999999999999999999988888888 5699876554332 1   11257999999999875 


Q ss_pred             HHHHHHhcccCCEEEEEcCCC--ccccCC--c-------eee---ee----chHhHHHHHHHHHhCCCccce-EEEeCcc
Q 019199          258 FDAYMSLLKVAGVYVLVGFPS--KVKFSP--A-------SLN---IG----GTKDTQEMLEYCAAHKIYPQI-ETIPIEN  318 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~~~--~~~~~~--~-------~~~---~~----~~~~~~~~~~~~~~g~~~~~~-~~~~~~~  318 (344)
                      +..++++++++|+++.+|...  ...++.  +       .+.   ..    ..+.++.+++++.++++++.+ +++++++
T Consensus       205 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~  284 (305)
T cd08270         205 LARALELLAPGGTVVSVGSSSGEPAVFNPAAFVGGGGGRRLYTFFLYDGEPLAADLARLLGLVAAGRLDPRIGWRGSWTE  284 (305)
T ss_pred             HHHHHHHhcCCCEEEEEeccCCCcccccHHHHhcccccceEEEEEccCHHHHHHHHHHHHHHHHCCCccceeccEEcHHH
Confidence            899999999999999998541  111111  1       111   11    135688899999999998754 8999999


Q ss_pred             HHHHHHHHHcCCcceEEEEEe
Q 019199          319 VNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       319 ~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++++++.+.+++..||+|+.+
T Consensus       285 ~~~a~~~~~~~~~~gkvvi~~  305 (305)
T cd08270         285 IDEAAEALLARRFRGKAVLDV  305 (305)
T ss_pred             HHHHHHHHHcCCCCceEEEeC
Confidence            999999999998889999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08249 enoyl_reductase_like enoyl_reductase_like

Probab=100.00  E-value=5.3e-34  Score=262.53  Aligned_cols=298  Identities=22%  Similarity=0.268  Sum_probs=236.7

Q ss_pred             eeeecCC-CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDP-SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++...+ +..+++++++.|+|+++||+||+.++++|++|+....+.. ....|.++|||++|+|+.+|++++.+++||+
T Consensus         3 a~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G~v~~vG~~v~~~~~Gd~   81 (339)
T cd08249           3 AAVLTGPGGGLLVVVDVPVPKPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAGTVVEVGSGVTRFKVGDR   81 (339)
T ss_pred             eEEeccCCCCcccccCCCCCCCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeEEEEEeCCCcCcCCCCCE
Confidence            4444322 4778899999999999999999999999999988775543 1234678999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |+..+.. .|+                          +...+|+|++|+.++.+.++++|+++++.+++.+++.+.|||+
T Consensus        82 V~~~~~~-~~~--------------------------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~  134 (339)
T cd08249          82 VAGFVHG-GNP--------------------------NDPRNGAFQEYVVADADLTAKIPDNISFEEAATLPVGLVTAAL  134 (339)
T ss_pred             EEEEecc-ccC--------------------------CCCCCCcccceEEechhheEECCCCCCHHHceecchHHHHHHH
Confidence            9864321 000                          1124689999999999999999999999999999999999999


Q ss_pred             HHHhccCC----------CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH-
Q 019199          171 PMMRHKMN----------QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM-  238 (344)
Q Consensus       171 ~l~~~~~~----------~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~-  238 (344)
                      ++.....+          +++++|+|+|+ |.+|++++++|+.+|++|+.++ ++++.+.+ +++|++++++.++.+.. 
T Consensus       135 ~l~~~~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~-~~~g~~~v~~~~~~~~~~  212 (339)
T cd08249         135 ALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLV-KSLGADAVFDYHDPDVVE  212 (339)
T ss_pred             HHhccccCCCCCCCCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHH-HhcCCCEEEECCCchHHH
Confidence            98766543          68999999997 9999999999999999998887 55777777 78999999988764332 


Q ss_pred             --HHh-cCCccEEEECCCCchhHHHHHHhccc--CCEEEEEcCCCcc-ccCC-ceee-------e--------echHhHH
Q 019199          239 --KAL-GKSLDFIIDTASGDHPFDAYMSLLKV--AGVYVLVGFPSKV-KFSP-ASLN-------I--------GGTKDTQ  296 (344)
Q Consensus       239 --~~~-~~~~dvvid~~g~~~~~~~~~~~l~~--~G~iv~~g~~~~~-~~~~-~~~~-------~--------~~~~~~~  296 (344)
                        .+. .+++|+++|++|++..+..+++++++  +|+++.+|..... .+.. ....       .        .....++
T Consensus       213 ~l~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (339)
T cd08249         213 DIRAATGGKLRYALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVFWK  292 (339)
T ss_pred             HHHHhcCCCeeEEEEeeccchHHHHHHHHHhccCCCEEEEecCCCccccCCCCceEEEEEeeeecccccccccchHHHHH
Confidence              222 36799999999985569999999999  9999999865111 1111 1100       1        1114577


Q ss_pred             HHHHHHHhCCCccce-EEEe--CccHHHHHHHHHcCC-cceEEEEEe
Q 019199          297 EMLEYCAAHKIYPQI-ETIP--IENVNEALERLIKRD-VKYRFVIDI  339 (344)
Q Consensus       297 ~~~~~~~~g~~~~~~-~~~~--~~~~~~a~~~~~~~~-~~gkvvi~~  339 (344)
                      .+++++.++.+.+.. ..++  ++++++|++.+.+++ ..+|+|+++
T Consensus       293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~  339 (339)
T cd08249         293 YLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL  339 (339)
T ss_pred             HHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence            789999999998753 6777  999999999999988 889999874

Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de

>TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family

Probab=100.00  E-value=6.4e-34  Score=260.19  Aligned_cols=290  Identities=24%  Similarity=0.334  Sum_probs=230.0

Q ss_pred             CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199           17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT   95 (344)
Q Consensus        17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~   95 (344)
                      +++..++++++|.|.+.+++|+||+.++++|++|+..+.|..+ ...+|.++|||++|+|++  +.++.|++||+|+..+
T Consensus         9 ~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~Gd~V~~~~   86 (323)
T TIGR02823         9 DGKVSAQVETLDLSDLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAGTVVS--SEDPRFREGDEVIVTG   86 (323)
T ss_pred             CCCcceeEeecCCCCCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEEEEEe--cCCCCCCCCCEEEEcc
Confidence            3445778999999999999999999999999999988877653 234578899999999998  5567899999997542


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc
Q 019199           96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH  175 (344)
Q Consensus        96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~  175 (344)
                      ..                             .|....|++++|+.++.+.++++|+++++.+++.+++.+.+|+.++...
T Consensus        87 ~~-----------------------------~~~~~~g~~~~~~~~~~~~~~~iP~~~~~~~aa~~~~~~~ta~~~~~~~  137 (323)
T TIGR02823        87 YG-----------------------------LGVSHDGGYSQYARVPADWLVPLPEGLSLREAMALGTAGFTAALSVMAL  137 (323)
T ss_pred             CC-----------------------------CCCCCCccceEEEEEchhheEECCCCCCHHHhhhhhhhHHHHHHHHHHh
Confidence            10                             0112358999999999999999999999999999999999998877544


Q ss_pred             cC--CCCCC-EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-HHHhc-CCccEEE
Q 019199          176 KM--NQPGK-SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-MKALG-KSLDFII  249 (344)
Q Consensus       176 ~~--~~~g~-~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-~~~~~-~~~dvvi  249 (344)
                      .+  +.+|+ +|+|+|+ |.+|++++++|+.+|+++++++.++++.+.+ +++|++.+++..+... +.... +++|+++
T Consensus       138 ~~~~~~~~~~~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vl  216 (323)
T TIGR02823       138 ERNGLTPEDGPVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYL-KELGASEVIDREDLSPPGKPLEKERWAGAV  216 (323)
T ss_pred             hhcCCCCCCceEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHH-HhcCCcEEEccccHHHHHHHhcCCCceEEE
Confidence            32  58898 9999998 9999999999999999999988888888777 7899988888765432 22332 4699999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e-----eec----hHhHHHHHHHHHhCCCccce
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N-----IGG----TKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~-----~~~----~~~~~~~~~~~~~g~~~~~~  311 (344)
                      |++|+.. +..++++++++|+++.+|...  ...++...+       .     ...    .+.++.+.+++..+.+.+.+
T Consensus       217 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (323)
T TIGR02823       217 DTVGGHT-LANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESIT  295 (323)
T ss_pred             ECccHHH-HHHHHHHhCCCCEEEEEcccCCCCccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCce
Confidence            9999875 899999999999999998651  111111111       1     011    12355666777788887667


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.|+++++++||+.+.+++..||+|+++
T Consensus       296 ~~~~l~~~~~a~~~~~~~~~~~k~vv~~  323 (323)
T TIGR02823       296 REITLEELPEALEQILAGQHRGRTVVDV  323 (323)
T ss_pred             eeecHHHHHHHHHHHhCCCccceEEEeC
Confidence            8999999999999999999899999864

This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc.

>cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=1.2e-33  Score=257.60  Aligned_cols=285  Identities=23%  Similarity=0.315  Sum_probs=230.6

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      ..+++.+.+.|.+.++||+||+.++++|+.|+....+..+....|.++|||++|+|+++|+  ..+++||+|+.....  
T Consensus        13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~vG~--~~~~~Gd~V~~~~~~--   88 (320)
T cd08243          13 EVLKLREIPIPEPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVGEVEEAPG--GTFTPGQRVATAMGG--   88 (320)
T ss_pred             cceEEeecCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEEEEEEecC--CCCCCCCEEEEecCC--
Confidence            4566677777889999999999999999999988877665455678999999999999995  579999999754210  


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ  179 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  179 (344)
                                              +   +....|+|++|+.+++..++++|+++++.+++.+++++.|||+++.....++
T Consensus        89 ------------------------~---~~~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~ta~~~l~~~~~~~  141 (320)
T cd08243          89 ------------------------M---GRTFDGSYAEYTLVPNEQVYAIDSDLSWAELAALPETYYTAWGSLFRSLGLQ  141 (320)
T ss_pred             ------------------------C---CCCCCcccceEEEcCHHHcEeCCCCCCHHHHHhcchHHHHHHHHHHHhcCCC
Confidence                                    0   1123589999999999999999999999999999999999999998888789


Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC--HHHHHHhcCCccEEEECCCCch
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~--~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      +|++|+|+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++++++...  .+.+.+..+++|+++|++++..
T Consensus       142 ~g~~vlV~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~d~vl~~~~~~~  220 (320)
T cd08243         142 PGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALL-KELGADEVVIDDGAIAEQLRAAPGGFDKVLELVGTAT  220 (320)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEecCccHHHHHHHhCCCceEEEECCChHH
Confidence            9999999997 9999999999999999999999999888888 6899988775432  1223333568999999999864


Q ss_pred             hHHHHHHhcccCCEEEEEcCC-Cccc------cCCc----eee-ee------chHhHHHHHHHHHhCCCccc-eEEEeCc
Q 019199          257 PFDAYMSLLKVAGVYVLVGFP-SKVK------FSPA----SLN-IG------GTKDTQEMLEYCAAHKIYPQ-IETIPIE  317 (344)
Q Consensus       257 ~~~~~~~~l~~~G~iv~~g~~-~~~~------~~~~----~~~-~~------~~~~~~~~~~~~~~g~~~~~-~~~~~~~  317 (344)
                       +..++++++++|+++.+|.. ....      +...    ... ..      ..+.++++++++.++.+++. ++.|+++
T Consensus       221 -~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  299 (320)
T cd08243         221 -LKDSLRHLRPGGIVCMTGLLGGQWTLEDFNPMDDIPSGVNLTLTGSSSGDVPQTPLQELFDFVAAGHLDIPPSKVFTFD  299 (320)
T ss_pred             -HHHHHHHhccCCEEEEEccCCCCcccCCcchhhhhhhccceEEEecchhhhhHHHHHHHHHHHHCCceecccccEEcHH
Confidence             99999999999999999863 1111      1100    000 11      12357888999999998764 4889999


Q ss_pred             cHHHHHHHHHcCCcceEEEE
Q 019199          318 NVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       318 ~~~~a~~~~~~~~~~gkvvi  337 (344)
                      ++++|++.+.+++..+|+++
T Consensus       300 ~~~~a~~~~~~~~~~~kvvv  319 (320)
T cd08243         300 EIVEAHAYMESNRAFGKVVV  319 (320)
T ss_pred             HHHHHHHHHHhCCCCCcEEe
Confidence            99999999998888889886

NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit.

>cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=8.2e-34  Score=257.55  Aligned_cols=256  Identities=26%  Similarity=0.438  Sum_probs=211.8

Q ss_pred             eeeecCC-CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           12 GWAARDP-SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        12 ~~~~~~~-~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +|+..++ +..+++++++.|++.+++|+||+.++++|++|.....+.......|.++|+|++|+|+++|++++.|++||+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~p~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~~Gd~   82 (306)
T cd08258           3 ALVKTGPGPGNVELREVPEPEPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSGTIVEVGPDVEGWKVGDR   82 (306)
T ss_pred             eEEEecCCCCceEEeecCCCCCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEEEEEEECCCcCcCCCCCE
Confidence            4444433 356889999999999999999999999999999888776533345788999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYT  170 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~  170 (344)
                      |+..+..+.|+.|.+|..+....|+... .+ +     ....|+|++|+.++...++++|+++++.+++ ++..+.+||+
T Consensus        83 V~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-~-----~~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa-~~~~~~~a~~  154 (306)
T cd08258          83 VVSETTFSTCGRCPYCRRGDYNLCPHRK-GI-G-----TQADGGFAEYVLVPEESLHELPENLSLEAAA-LTEPLAVAVH  154 (306)
T ss_pred             EEEccCcCCCCCCcchhCcCcccCCCCc-ee-e-----ecCCCceEEEEEcchHHeEECcCCCCHHHHH-hhchHHHHHH
Confidence            9988877789999999999999998631 11 1     1245899999999999999999999999887 7778889999


Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC--CchhHHHHHHhCCCcEEEeCCCHHH---HHHh--cC
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST--STSKKEEALSLLGADKFVVSSDLEQ---MKAL--GK  243 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~--~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~  243 (344)
                      ++.....+++|++|||.|+|.+|++++++|+.+|++|+++..  .+++.+.+ +++|++++ +....+.   +.+.  .+
T Consensus       155 ~l~~~~~~~~g~~vlI~g~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~-~~~g~~~~-~~~~~~~~~~l~~~~~~~  232 (306)
T cd08258         155 AVAERSGIRPGDTVVVFGPGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVA-KELGADAV-NGGEEDLAELVNEITDGD  232 (306)
T ss_pred             HHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHH-HHhCCccc-CCCcCCHHHHHHHHcCCC
Confidence            988888889999999988899999999999999999887743  33355555 68998877 6654433   2222  25


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++|++|+...+..++++++++|+++.+|..
T Consensus       233 ~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~  266 (306)
T cd08258         233 GADVVIECSGAVPALEQALELLRKGGRIVQVGIF  266 (306)
T ss_pred             CCCEEEECCCChHHHHHHHHHhhcCCEEEEEccc
Confidence            7999999998766689999999999999999876

This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous

>cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members

Probab=100.00  E-value=1.3e-33  Score=258.90  Aligned_cols=291  Identities=24%  Similarity=0.322  Sum_probs=235.0

Q ss_pred             cceeeeeecCC--CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199            8 KDCLGWAARDP--SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         8 ~~~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      |+++.+.-.++  ++.+++++.+.|.+.++|++||+.++++|+.|+....|... ...+|.++|||++|+|+.+|+++++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G~v~~vG~~v~~   81 (329)
T cd08250           2 FRKLVVHRLSPNFREATSIVDVPVPLPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVGEVVAVGEGVTD   81 (329)
T ss_pred             ceEEEeccCCCCcccCceEEecCCCCCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEEEEEEECCCCCC
Confidence            44444444444  67788899999999999999999999999999988877654 2457889999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      +++||+|+..                                    ..|+|++|+.++.+.++++|++  +.+++.+++.
T Consensus        82 ~~~Gd~V~~~------------------------------------~~g~~~s~~~v~~~~~~~ip~~--~~~~a~l~~~  123 (329)
T cd08250          82 FKVGDAVATM------------------------------------SFGAFAEYQVVPARHAVPVPEL--KPEVLPLLVS  123 (329)
T ss_pred             CCCCCEEEEe------------------------------------cCcceeEEEEechHHeEECCCC--cchhhhcccH
Confidence            9999999752                                    2488999999999999999997  3567789999


Q ss_pred             hhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHH
Q 019199          165 GITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKA  240 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~  240 (344)
                      +.|||+++.....+++|++++|+|+ |.+|++++++++..|++|+++++++++.+.+ +++|++.+++....+.   +..
T Consensus       124 ~~ta~~~l~~~~~~~~~~~vlI~ga~g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~  202 (329)
T cd08250         124 GLTASIALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFL-KSLGCDRPINYKTEDLGEVLKK  202 (329)
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEEeCccHHHHHHHHHHHHcCCeEEEEeCcHHHHHHH-HHcCCceEEeCCCccHHHHHHH
Confidence            9999999988777899999999996 9999999999999999999999988888888 6899988887655432   222


Q ss_pred             h-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcc------------ccCC--c----eee---ee-----chH
Q 019199          241 L-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKV------------KFSP--A----SLN---IG-----GTK  293 (344)
Q Consensus       241 ~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------------~~~~--~----~~~---~~-----~~~  293 (344)
                      . .+++|++||++|+.. +..++++++++|+++.+|.....            .++.  +    .+.   ..     ..+
T Consensus       203 ~~~~~vd~v~~~~g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  281 (329)
T cd08250         203 EYPKGVDVVYESVGGEM-FDTCVDNLALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQ  281 (329)
T ss_pred             hcCCCCeEEEECCcHHH-HHHHHHHhccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHH
Confidence            2 367999999999754 99999999999999999865110            1110  0    001   00     124


Q ss_pred             hHHHHHHHHHhCCCccc---eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          294 DTQEMLEYCAAHKIYPQ---IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       294 ~~~~~~~~~~~g~~~~~---~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .++++++++.++.+++.   .+.|+++++++|++.+.+++..+|++++
T Consensus       282 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvv~  329 (329)
T cd08250         282 HLDRLLQLYQRGKLVCEVDPTRFRGLESVADAVDYLYSGKNIGKVVVE  329 (329)
T ss_pred             HHHHHHHHHHCCCeeeeECCccccCHHHHHHHHHHHHcCCCCceEEeC
Confidence            56788899999998763   3568999999999999998888999874

Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1

Probab=100.00  E-value=2.3e-33  Score=259.40  Aligned_cols=282  Identities=26%  Similarity=0.360  Sum_probs=229.0

Q ss_pred             ccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCC---------------CCCCCCCcccccceEEEEecCCCCCC
Q 019199           22 LSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHG---------------DSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus        22 ~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      +.+++.+.|+| .++||+||+.++++|++|+....|...               ....|.++|||++|+|+++|+.+++|
T Consensus        16 ~~~~~~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~~~G~e~~G~v~~vG~~v~~~   95 (350)
T cd08248          16 LLLENARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPLTLGRDCSGVVVDIGSGVKSF   95 (350)
T ss_pred             eeecccCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCeeecceeEEEEEecCCCcccC
Confidence            78888999999 499999999999999999988776421               23457899999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||+|+..+..                                ...|+|++|+.++++.++++|++++..+++.+++.+
T Consensus        96 ~~Gd~V~~~~~~--------------------------------~~~g~~~~~~~v~~~~~~~lp~~~~~~~aa~~~~~~  143 (350)
T cd08248          96 EIGDEVWGAVPP--------------------------------WSQGTHAEYVVVPENEVSKKPKNLSHEEAASLPYAG  143 (350)
T ss_pred             CCCCEEEEecCC--------------------------------CCCccceeEEEecHHHeecCCCCCCHHHHhhchhHH
Confidence            999999764321                                124889999999999999999999999999999999


Q ss_pred             hHhHHHHHhccCCCC----CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199          166 ITVYTPMMRHKMNQP----GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA  240 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~----g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~  240 (344)
                      .|||.++.+...+.+    |++|+|+|+ |.+|++++++++.+|++|+++.++ ++.+.+ +++|.+.+++..+.+....
T Consensus       144 ~ta~~~l~~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~  221 (350)
T cd08248         144 LTAWSALVNVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLV-KSLGADDVIDYNNEDFEEE  221 (350)
T ss_pred             HHHHHHHHHhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHH-HHhCCceEEECCChhHHHH
Confidence            999999877776554    999999996 999999999999999999887754 555555 7899988888776544433


Q ss_pred             h--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---cc--cc--CCc----eee------------------e
Q 019199          241 L--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KV--KF--SPA----SLN------------------I  289 (344)
Q Consensus       241 ~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~--~~--~~~----~~~------------------~  289 (344)
                      +  .+++|++||++|+. ....++++++++|+++.+|...   ..  .+  ..+    .+.                  .
T Consensus       222 l~~~~~vd~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  300 (350)
T cd08248         222 LTERGKFDVILDTVGGD-TEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFS  300 (350)
T ss_pred             HHhcCCCCEEEECCChH-HHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEEC
Confidence            3  26799999999987 4999999999999999998541   10  01  000    000                  0


Q ss_pred             echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          290 GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       290 ~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      ...+.++++++++.++.+.+.+ +.|++++++++++.+.+++..+|++++
T Consensus       301 ~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  350 (350)
T cd08248         301 PSGSALDELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK  350 (350)
T ss_pred             CCHHHHHHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence            1235688899999999987654 899999999999999988878898863

Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES.

>cd05282 ETR_like 2-enoyl thioester reductase-like

Probab=100.00  E-value=1.2e-33  Score=258.10  Aligned_cols=281  Identities=21%  Similarity=0.280  Sum_probs=234.0

Q ss_pred             CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           21 VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        21 ~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      .+++++.+.|++.+++|+||+.++++|+.|...+.+... ...+|.++|||++|+|+++|++++.+++||+|+..+    
T Consensus        13 ~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~----   88 (323)
T cd05282          13 VLELVSLPIPPPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLG----   88 (323)
T ss_pred             eEEeEeCCCCCCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEEEEEEeCCCCCCCCCCCEEEEeC----
Confidence            577778889999999999999999999999888766543 234578999999999999999999999999997532    


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ  179 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  179 (344)
                                                     ..|+|++|+.++...++++|++++..+++.+++.+.|||+++.....+.
T Consensus        89 -------------------------------~~g~~~~~~~~~~~~~~~lp~~~~~~~~a~~~~~~~ta~~~~~~~~~~~  137 (323)
T cd05282          89 -------------------------------GEGTWQEYVVAPADDLIPVPDSISDEQAAMLYINPLTAWLMLTEYLKLP  137 (323)
T ss_pred             -------------------------------CCCcceeEEecCHHHeEECCCCCCHHHHHHHhccHHHHHHHHHHhccCC
Confidence                                           1488999999999999999999999999999999999999988887789


Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---hc--CCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---LG--KSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~--~~~dvvid~~g  253 (344)
                      +|++|+|+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++++++........+   ..  +++|+++|++|
T Consensus       138 ~~~~vlI~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~g  216 (323)
T cd05282         138 PGDWVIQNAANSAVGRMLIQLAKLLGFKTINVVRRDEQVEEL-KALGADEVIDSSPEDLAQRVKEATGGAGARLALDAVG  216 (323)
T ss_pred             CCCEEEEcccccHHHHHHHHHHHHCCCeEEEEecChHHHHHH-HhcCCCEEecccchhHHHHHHHHhcCCCceEEEECCC
Confidence            9999999987 8999999999999999999999999998888 6899999988776443332   22  57999999999


Q ss_pred             CchhHHHHHHhcccCCEEEEEcCC-Cc-cccCC-------ceee---ee------c----hHhHHHHHHHHHhCCCccc-
Q 019199          254 GDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSP-------ASLN---IG------G----TKDTQEMLEYCAAHKIYPQ-  310 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~-------~~~~---~~------~----~~~~~~~~~~~~~g~~~~~-  310 (344)
                      +.. ...++++++++|+++.+|.. .. ..++.       ..+.   ..      .    .+.++++++++.++.+.+. 
T Consensus       217 ~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~  295 (323)
T cd05282         217 GES-ATRLARSLRPGGTLVNYGLLSGEPVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPV  295 (323)
T ss_pred             CHH-HHHHHHhhCCCCEEEEEccCCCCCCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCc
Confidence            876 78889999999999999865 21 11111       1111   11      1    1357778899999999775 


Q ss_pred             eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          311 IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .+.|++++++++++.+.+++..+|++++
T Consensus       296 ~~~~~~~~~~~a~~~~~~~~~~~kvv~~  323 (323)
T cd05282         296 GAKFPLEDFEEAVAAAEQPGRGGKVLLT  323 (323)
T ss_pred             cceecHHHHHHHHHHHhcCCCCceEeeC
Confidence            4889999999999999998888998863

2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman

>cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases

Probab=100.00  E-value=3.6e-33  Score=255.56  Aligned_cols=298  Identities=23%  Similarity=0.325  Sum_probs=223.2

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-CCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-GDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++..+...+++..+.+++.+.|.|.++||+||+.++++|++|.....+.. ....+|.++|||++|+|++.|  +++|++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~~~--~~~~~~   79 (326)
T cd08289           2 QALVVEKDEDDVSVSVKNLTLDDLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAGTVVESN--DPRFKP   79 (326)
T ss_pred             eeEEEeccCCcceeEEEEccCCCCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeEEEEEcC--CCCCCC
Confidence            34444433333457788999999999999999999999999986654321 123457899999999999954  578999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+..+..                             .|....|+|++|+.++++.++++|+++++.+++.+++.+.|
T Consensus        80 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~~p~~~~~~~a~~~~~~~~t  130 (326)
T cd08289          80 GDEVIVTSYD-----------------------------LGVSHHGGYSEYARVPAEWVVPLPKGLTLKEAMILGTAGFT  130 (326)
T ss_pred             CCEEEEcccc-----------------------------cCCCCCCcceeEEEEcHHHeEECCCCCCHHHHhhhhhHHHH
Confidence            9999754310                             01124589999999999999999999999999999999999


Q ss_pred             hHHHHHhccC---CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHh
Q 019199          168 VYTPMMRHKM---NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKAL  241 (344)
Q Consensus       168 a~~~l~~~~~---~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~  241 (344)
                      |+.++....+   ...+++|||+|+ |.+|++++++|+.+|++|+++++++++.+.+ +++|++++++.++.  +.+.+.
T Consensus       131 a~~~l~~~~~~~~~~~~~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~v~~~~~~~~~~~~~~  209 (326)
T cd08289         131 AALSIHRLEENGLTPEQGPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYL-KKLGAKEVIPREELQEESIKPL  209 (326)
T ss_pred             HHHHHHHHHhcCCCCCCCEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHH-HHcCCCEEEcchhHHHHHHHhh
Confidence            9888754332   345789999998 9999999999999999999999999999888 68999888887653  222222


Q ss_pred             -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e----eec-hHhHHHHHHHHHh--
Q 019199          242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N----IGG-TKDTQEMLEYCAA--  304 (344)
Q Consensus       242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~----~~~-~~~~~~~~~~~~~--  304 (344)
                       .+++|++||++|+. .+..++++++++|+++.+|...  ..++....+       .    ... .....++++.+.+  
T Consensus       210 ~~~~~d~vld~~g~~-~~~~~~~~l~~~G~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (326)
T cd08289         210 EKQRWAGAVDPVGGK-TLAYLLSTLQYGGSVAVSGLTGGGEVETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDL  288 (326)
T ss_pred             ccCCcCEEEECCcHH-HHHHHHHHhhcCCEEEEEeecCCCCCCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhc
Confidence             35799999999985 4999999999999999998651  112111111       0    011 1223334333332  


Q ss_pred             --CCCcc-ceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          305 --HKIYP-QIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       305 --g~~~~-~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                        ..+.+ ..++|+++++++||+.+.+++..||+|+++
T Consensus       289 ~~~~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~  326 (326)
T cd08289         289 KPTQLLNEIKQEITLDELPEALKQILQGRVTGRTVVKL  326 (326)
T ss_pred             CccccccccceEeeHHHHHHHHHHHhcCcccceEEEeC
Confidence              21222 358999999999999999999889999864

yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH

>cd08252 AL_MDR Arginate lyase and other MDR family members

Probab=100.00  E-value=5.7e-33  Score=255.26  Aligned_cols=284  Identities=25%  Similarity=0.341  Sum_probs=230.3

Q ss_pred             ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCC
Q 019199           22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCR  101 (344)
Q Consensus        22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~  101 (344)
                      +..++++.|++.+++|+||+.++++|++|+....+..+....|.++|||++|+|+++|+.+..|++||+|+.....    
T Consensus        18 ~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~----   93 (336)
T cd08252          18 LIDIELPKPVPGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASGVVEAVGSEVTLFKVGDEVYYAGDI----   93 (336)
T ss_pred             eeEccCCCCCCCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEEEEEEcCCCCCCCCCCCEEEEcCCC----
Confidence            6667788888999999999999999999988877765434467789999999999999999999999999742110    


Q ss_pred             CCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCC-
Q 019199          102 DCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP-  180 (344)
Q Consensus       102 ~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~-  180 (344)
                                                  ...|+|++|+.++.+.++++|++++..+++.+++.+.|||.++.....+.+ 
T Consensus        94 ----------------------------~~~g~~~~~~~v~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~l~~~~~~~~~  145 (336)
T cd08252          94 ----------------------------TRPGSNAEYQLVDERIVGHKPKSLSFAEAAALPLTSLTAWEALFDRLGISED  145 (336)
T ss_pred             ----------------------------CCCccceEEEEEchHHeeeCCCCCCHHHhhhhhhHHHHHHHHHHHhcCCCCC
Confidence                                        135889999999999999999999999999999999999999877666676 


Q ss_pred             ----CCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc-CCccEEEEC
Q 019199          181 ----GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG-KSLDFIIDT  251 (344)
Q Consensus       181 ----g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~-~~~dvvid~  251 (344)
                          |++|+|+|+ |++|++++++++.+| ++|+++++++++.+.+ +++|++.+++....  ..+.... +++|+++|+
T Consensus       146 ~~~~g~~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~i~~~~~~~~d~vl~~  224 (336)
T cd08252         146 AENEGKTLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWV-KELGADHVINHHQDLAEQLEALGIEPVDYIFCL  224 (336)
T ss_pred             cCCCCCEEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHH-HhcCCcEEEeCCccHHHHHHhhCCCCCCEEEEc
Confidence                999999986 999999999999999 8999999999988888 68999888887631  2222223 579999999


Q ss_pred             CCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc-----eee---ee------------chHhHHHHHHHHHhCCCccc
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA-----SLN---IG------------GTKDTQEMLEYCAAHKIYPQ  310 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~-----~~~---~~------------~~~~~~~~~~~~~~g~~~~~  310 (344)
                      +++...+..++++++++|+++.+|.. ...+...+     .+.   ..            ..+.++++++++.++.+++.
T Consensus       225 ~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~  304 (336)
T cd08252         225 TDTDQHWDAMAELIAPQGHICLIVDPQEPLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGKLKTT  304 (336)
T ss_pred             cCcHHHHHHHHHHhcCCCEEEEecCCCCcccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCCEecc
Confidence            99765699999999999999999854 11111111     111   00            01347789999999999864


Q ss_pred             e----EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          311 I----ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       311 ~----~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      .    +.+++++++++++.+.+++..+|++++
T Consensus       305 ~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~  336 (336)
T cd08252         305 LTETLGPINAENLREAHALLESGKTIGKIVLE  336 (336)
T ss_pred             eeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence            2    357999999999999999888999864

This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil

>cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family

Probab=100.00  E-value=7.8e-33  Score=251.62  Aligned_cols=280  Identities=21%  Similarity=0.264  Sum_probs=223.7

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhh-cCCCCC--CCCCCCcccccceEEEEecCCCCCCCCCCEEEEe
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWT-RNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG   94 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~-~g~~~~--~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~   94 (344)
                      +++.++++++++|++.++||+||+.++++|++|+..+ .|....  +..|.++|||++|+|+++|+.++++++||+|+.+
T Consensus         3 ~~~~~~~~~~~~~~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~Gd~V~~~   82 (312)
T cd08269           3 GPGRFEVEEHPRPTPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWGRVVALGPGVRGLAVGDRVAGL   82 (312)
T ss_pred             CCCeeEEEECCCCCCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEEEEEEECCCCcCCCCCCEEEEe
Confidence            3467888999999999999999999999999998877 664421  2347889999999999999999999999999753


Q ss_pred             ccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHh
Q 019199           95 TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR  174 (344)
Q Consensus        95 ~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~  174 (344)
                      +                                    .|+|++|+.++++.++++|+++  ..++....++.++++++. 
T Consensus        83 ~------------------------------------~g~~~~~~~v~~~~~~~lP~~~--~~~~~~~~~~~~a~~~~~-  123 (312)
T cd08269          83 S------------------------------------GGAFAEYDLADADHAVPLPSLL--DGQAFPGEPLGCALNVFR-  123 (312)
T ss_pred             c------------------------------------CCcceeeEEEchhheEECCCch--hhhHHhhhhHHHHHHHHH-
Confidence            2                                    3789999999999999999998  222222367788998887 


Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFI  248 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvv  248 (344)
                      ...+++|++|+|+|+|.+|++++++|+.+|++ |+++++.+++.+.+ +++|++.+++.+..+.   +.+..  .++|++
T Consensus       124 ~~~~~~~~~vlI~g~g~vg~~~~~la~~~g~~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~l~~~~~~~~vd~v  202 (312)
T cd08269         124 RGWIRAGKTVAVIGAGFIGLLFLQLAAAAGARRVIAIDRRPARLALA-RELGATEVVTDDSEAIVERVRELTGGAGADVV  202 (312)
T ss_pred             hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCceEecCCCcCHHHHHHHHcCCCCCCEE
Confidence            56668999999998899999999999999998 99998888888766 7899988887654332   33332  579999


Q ss_pred             EECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCC-------ceee---ee----chHhHHHHHHHHHhCCCcc---
Q 019199          249 IDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSP-------ASLN---IG----GTKDTQEMLEYCAAHKIYP---  309 (344)
Q Consensus       249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~-------~~~~---~~----~~~~~~~~~~~~~~g~~~~---  309 (344)
                      +|++|+...+..++++++++|+++.+|...  ...++.       ..+.   ..    ..+.++++++++.++.+.+   
T Consensus       203 ld~~g~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  282 (312)
T cd08269         203 IEAVGHQWPLDLAGELVAERGRLVIFGYHQDGPRPVPFQTWNWKGIDLINAVERDPRIGLEGMREAVKLIADGRLDLGSL  282 (312)
T ss_pred             EECCCCHHHHHHHHHHhccCCEEEEEccCCCCCcccCHHHHhhcCCEEEEecccCccchhhHHHHHHHHHHcCCCCchhh
Confidence            999987666899999999999999998541  111111       1111   11    1257899999999999986   


Q ss_pred             ceEEEeCccHHHHHHHHHcCCc-ceEEEE
Q 019199          310 QIETIPIENVNEALERLIKRDV-KYRFVI  337 (344)
Q Consensus       310 ~~~~~~~~~~~~a~~~~~~~~~-~gkvvi  337 (344)
                      ..+.|++++++++++.+.+++. .+|+++
T Consensus       283 ~~~~~~~~~~~~a~~~~~~~~~~~~~~~~  311 (312)
T cd08269         283 LTHEFPLEELGDAFEAARRRPDGFIKGVI  311 (312)
T ss_pred             eeeeecHHHHHHHHHHHHhCCCCceEEEe
Confidence            3478999999999999999865 589886

The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i

>cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases

Probab=100.00  E-value=5.8e-32  Score=247.35  Aligned_cols=298  Identities=20%  Similarity=0.310  Sum_probs=231.4

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      |+..+.-.++++.+++++.+.|+|.++||+||+.++++|++|.....|... ...+|.++|||++|+|++  +.++.+++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~p~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~V~~--~~~~~~~~   79 (324)
T cd08288           2 KALVLEKDDGGTSAELRELDESDLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAGTVVE--SSSPRFKP   79 (324)
T ss_pred             eeEEEeccCCCcceEEEECCCCCCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEEEEEe--CCCCCCCC
Confidence            333343333334688899999999999999999999999999988776543 234578899999999999  67788999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+.....                             .+....|+|++|+.++.+.++++|++++..+++.+++.+.+
T Consensus        80 Gd~V~~~~~~-----------------------------~~~~~~g~~~~~~~v~~~~~~~lp~~~~~~~~~~~~~~~~t  130 (324)
T cd08288          80 GDRVVLTGWG-----------------------------VGERHWGGYAQRARVKADWLVPLPEGLSARQAMAIGTAGFT  130 (324)
T ss_pred             CCEEEECCcc-----------------------------CCCCCCCcceeEEEEchHHeeeCCCCCCHHHHhhhhhHHHH
Confidence            9999753200                             01113588999999999999999999999999999999999


Q ss_pred             hHHHHH---hccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-HHHh-
Q 019199          168 VYTPMM---RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-MKAL-  241 (344)
Q Consensus       168 a~~~l~---~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-~~~~-  241 (344)
                      ++.++.   ......+|++|+|+|+ |.+|++++++|+.+|++|++++.++++.+.+ +++|+++++++++... +... 
T Consensus       131 a~~~~~~~~~~~~~~~~~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~  209 (324)
T cd08288         131 AMLCVMALEDHGVTPGDGPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYL-RSLGASEIIDRAELSEPGRPLQ  209 (324)
T ss_pred             HHHHHHHHhhcCcCCCCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCEEEEcchhhHhhhhhc
Confidence            887654   3444236789999998 9999999999999999999999999998888 7899999998765432 2222 


Q ss_pred             cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e-----e----echHhHHHHHHHHH
Q 019199          242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N-----I----GGTKDTQEMLEYCA  303 (344)
Q Consensus       242 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~-----~----~~~~~~~~~~~~~~  303 (344)
                      .+++|.++|++++.. +...+..++.+|+++.+|...  ...++...+       .     .    ...+.++.+++++.
T Consensus       210 ~~~~~~~~d~~~~~~-~~~~~~~~~~~g~~~~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  288 (324)
T cd08288         210 KERWAGAVDTVGGHT-LANVLAQTRYGGAVAACGLAGGADLPTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLD  288 (324)
T ss_pred             cCcccEEEECCcHHH-HHHHHHHhcCCCEEEEEEecCCCCCCcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHh
Confidence            246899999999754 778889999999999998641  111111111       0     0    11235677788888


Q ss_pred             hCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          304 AHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       304 ~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++.+.+.++.+++++++++++.+.+++..||+++++
T Consensus       289 ~~~~~~i~~~~~~~~~~~a~~~~~~~~~~~~vvv~~  324 (324)
T cd08288         289 PALLEALTREIPLADVPDAAEAILAGQVRGRVVVDV  324 (324)
T ss_pred             cCCccccceeecHHHHHHHHHHHhcCCccCeEEEeC
Confidence            888877678999999999999999999889999864

Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal

>cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.5e-32  Score=249.42  Aligned_cols=289  Identities=24%  Similarity=0.330  Sum_probs=233.9

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++.+...+.+..+++++.+.|.|.+++|+|++.++++|++|+....|..+ ...+|.++|||++|+|+.+|+++..|++|
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~vG~~v~~~~~G   82 (331)
T cd08273           3 EVVVTRRGGPEVLKVVEADLPEPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVGRVDALGSGVTGFEVG   82 (331)
T ss_pred             eEEEccCCCcccEEEeccCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEEEEEEeCCCCccCCCC
Confidence            34444444456788889999999999999999999999999988877653 23467899999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+|+..+                                   ..|++++|+.++.+.++++|++++..+++.+++.+.+|
T Consensus        83 d~V~~~~-----------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~a~~~~~~~~ta  127 (331)
T cd08273          83 DRVAALT-----------------------------------RVGGNAEYINLDAKYLVPVPEGVDAAEAVCLVLNYVTA  127 (331)
T ss_pred             CEEEEeC-----------------------------------CCcceeeEEEechHHeEECCCCCCHHHHHhhhhHHHHH
Confidence            9997532                                   13789999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH--HhcCCc
Q 019199          169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--ALGKSL  245 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~~~~~  245 (344)
                      |+++.....+.+|++|+|+|+ |.+|++++++++.+|++|+++++ +++.+.+ +++|++. ++....+...  ...+++
T Consensus       128 ~~~l~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~-~~~g~~~-~~~~~~~~~~~~~~~~~~  204 (331)
T cd08273         128 YQMLHRAAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTAS-ERNHAAL-RELGATP-IDYRTKDWLPAMLTPGGV  204 (331)
T ss_pred             HHHHHHhcCCCCCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEeC-HHHHHHH-HHcCCeE-EcCCCcchhhhhccCCCc
Confidence            999988777799999999997 99999999999999999999987 7777777 6789654 4443322221  123679


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--c--cccCC-------------c----eee-----e-------ec
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--K--VKFSP-------------A----SLN-----I-------GG  291 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~--~~~~~-------------~----~~~-----~-------~~  291 (344)
                      |+++|++++.. +..++++++++|+++.+|.. .  .  ..+++             .    .+.     .       ..
T Consensus       205 d~vl~~~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~  283 (331)
T cd08273         205 DVVFDGVGGES-YEESYAALAPGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLF  283 (331)
T ss_pred             eEEEECCchHH-HHHHHHHhcCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHH
Confidence            99999999887 99999999999999999865 1  1  11100             0    000     0       01


Q ss_pred             hHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          292 TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      .+.++++++++.++.+++.. +.|++++++++++.+.+++..||+|+
T Consensus       284 ~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~gkvv~  330 (331)
T cd08273         284 RQDLTELLDLLAKGKIRPKIAKRLPLSEVAEAHRLLESGKVVGKIVL  330 (331)
T ss_pred             HHHHHHHHHHHHCCCccCCcceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence            35678899999999998754 88999999999999998888899886

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR)

Probab=100.00  E-value=4.5e-32  Score=247.24  Aligned_cols=299  Identities=20%  Similarity=0.271  Sum_probs=238.7

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++.++...+.+..+.+.+++.|.+.+++|+|++.++++|++|.....|... ....|.++|||++|+|+++|+++.+|++
T Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~   81 (325)
T cd08253           2 RAIRYHEFGAPDVLRLGDLPVPTPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAGVVEAVGEGVDGLKV   81 (325)
T ss_pred             ceEEEcccCCcccceeeecCCCCCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEEEEEeeCCCCCCCCC
Confidence            445555444455688889999999999999999999999999988777543 3456789999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+..+..                          .  .  ...|++++|+.++.+.++++|++++..+++.+++++.+
T Consensus        82 Gd~v~~~~~~--------------------------~--~--~~~g~~~~~~~~~~~~~~~ip~~~~~~~aa~~~~~~~~  131 (325)
T cd08253          82 GDRVWLTNLG--------------------------W--G--RRQGTAAEYVVVPADQLVPLPDGVSFEQGAALGIPALT  131 (325)
T ss_pred             CCEEEEeccc--------------------------c--C--CCCcceeeEEEecHHHcEeCCCCCCHHHHhhhhhHHHH
Confidence            9999764310                          0  0  13588999999999999999999999999999999999


Q ss_pred             hHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHh--
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KAL--  241 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~--  241 (344)
                      ||+++.....+.+|++++|+|+ |.+|++++++++..|++|+++++++++.+.+ +++|++.+++....+..   .+.  
T Consensus       132 a~~~l~~~~~~~~g~~vlI~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  210 (325)
T cd08253         132 AYRALFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELV-RQAGADAVFNYRAEDLADRILAATA  210 (325)
T ss_pred             HHHHHHHHhCCCCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHHcC
Confidence            9999988677799999999997 9999999999999999999999998888888 57898888887654332   222  


Q ss_pred             cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCce-------ee-----eec----hHhHHHHHHHHHh
Q 019199          242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPAS-------LN-----IGG----TKDTQEMLEYCAA  304 (344)
Q Consensus       242 ~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~-------~~-----~~~----~~~~~~~~~~~~~  304 (344)
                      .+++|+++++.++.. ....+++++++|+++.+|... ...++...       +.     ...    .+.++.+.+++.+
T Consensus       211 ~~~~d~vi~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  289 (325)
T cd08253         211 GQGVDVIIEVLANVN-LAKDLDVLAPGGRIVVYGSGGLRGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLAD  289 (325)
T ss_pred             CCceEEEEECCchHH-HHHHHHhhCCCCEEEEEeecCCcCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHC
Confidence            257999999999876 888999999999999998631 11111111       11     111    1345666777888


Q ss_pred             CCCccc-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          305 HKIYPQ-IETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       305 g~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.+++. ++.|++++++++++.+.++...||+++++
T Consensus       290 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  325 (325)
T cd08253         290 GALRPVIAREYPLEEAAAAHEAVESGGAIGKVVLDP  325 (325)
T ss_pred             CCccCccccEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            888765 48899999999999999988889999863

Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts

>cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast

Probab=100.00  E-value=6.3e-32  Score=250.04  Aligned_cols=296  Identities=22%  Similarity=0.254  Sum_probs=225.5

Q ss_pred             eeeecCCCCCccceeeccCCC---CCCcEEEEEeeeecccchhhhhcCCCCCCC-CCCCcccccceEEEEecCCCC-CCC
Q 019199           12 GWAARDPSGVLSPYSFNRRAV---GSDDVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNVS-RFK   86 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~---~~~evlV~v~~~~i~~~D~~~~~g~~~~~~-~p~~~G~e~~G~V~~~G~~~~-~~~   86 (344)
                      +|+..+..+.+++++.+.|.|   .+++|+||+.++++|++|+....+...... .|.++|||++|+|+++|++++ .|+
T Consensus         3 ~~~~~~~~~~~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~V~~vG~~v~~~~~   82 (352)
T cd08247           3 ALTFKNNTSPLTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSGVIVKVGSNVASEWK   82 (352)
T ss_pred             eEEEecCCCcceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEEEEEEeCcccccCCC
Confidence            444444444555655555554   999999999999999999887654322112 377899999999999999998 899


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc----eEEEcCCCCCcccccccc
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER----YCYKIANDYPLALAAPLL  162 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~----~~~~~P~~~~~~~aa~l~  162 (344)
                      +||+|+.....    .                          ....|+|++|+.+++.    .++++|+++++.+++.++
T Consensus        83 ~Gd~V~~~~~~----~--------------------------~~~~g~~~~~~~v~~~~~~~~~~~lP~~l~~~~aa~~~  132 (352)
T cd08247          83 VGDEVCGIYPH----P--------------------------YGGQGTLSQYLLVDPKKDKKSITRKPENISLEEAAAWP  132 (352)
T ss_pred             CCCEEEEeecC----C--------------------------CCCCceeeEEEEEccccccceeEECCCCCCHHHHHHhH
Confidence            99999754311    0                          0135899999999987    799999999999999999


Q ss_pred             hhhhHhHHHHHhcc-CCCCCCEEEEECC-ChHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH--
Q 019199          163 CAGITVYTPMMRHK-MNQPGKSLGVIGL-GGLGHMAVKFGKAF-GL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLE--  236 (344)
Q Consensus       163 ~~~~ta~~~l~~~~-~~~~g~~vlI~Ga-g~~G~~ai~~a~~~-g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--  236 (344)
                      +.+.|||+++.... .+++|++|+|+|+ +.+|++++++|+.+ +. +|+.+. ++++.+.+ +++|++.+++.++.+  
T Consensus       133 ~~~~ta~~~l~~~~~~~~~g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~-~~~~~~~~-~~~g~~~~i~~~~~~~~  210 (352)
T cd08247         133 LVLGTAYQILEDLGQKLGPDSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTC-SSRSAELN-KKLGADHFIDYDAHSGV  210 (352)
T ss_pred             HHHHHHHHHHHHhhhccCCCCeEEEECCCchHHHHHHHHHHhcCCcceEEEEe-ChhHHHHH-HHhCCCEEEecCCCccc
Confidence            99999999998877 6799999999998 89999999999987 44 566665 45555556 789998888865433  


Q ss_pred             -H----HHHh--cCCccEEEECCCCchhHHHHHHhcc---cCCEEEEEcCCC--c-c--c--------cCCcee------
Q 019199          237 -Q----MKAL--GKSLDFIIDTASGDHPFDAYMSLLK---VAGVYVLVGFPS--K-V--K--------FSPASL------  287 (344)
Q Consensus       237 -~----~~~~--~~~~dvvid~~g~~~~~~~~~~~l~---~~G~iv~~g~~~--~-~--~--------~~~~~~------  287 (344)
                       .    +...  .+++|++||++|+......++++++   ++|+++.++...  . .  .        +....+      
T Consensus       211 ~~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  290 (352)
T cd08247         211 KLLKPVLENVKGQGKFDLILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGL  290 (352)
T ss_pred             chHHHHHHhhcCCCCceEEEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcC
Confidence             2    2222  3689999999998555889999999   999999874211  0 0  0        000000      


Q ss_pred             -----e--e--echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          288 -----N--I--GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       288 -----~--~--~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                           .  .  ...+.++++++++.++.+++.. +.|++++++++++.+.+++..||+++++
T Consensus       291 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~  352 (352)
T cd08247         291 WSYNYQFFLLDPNADWIEKCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV  352 (352)
T ss_pred             CCcceEEEEecCCHHHHHHHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence                 0  0  1124678899999999998754 8999999999999999988889999864

This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi

>cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase

Probab=100.00  E-value=9.1e-32  Score=244.89  Aligned_cols=282  Identities=26%  Similarity=0.357  Sum_probs=230.8

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV   97 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~   97 (344)
                      ++.+++.+.+.|.+.+++|+||+.++++|+.|+....+..+ ...+|.++|||++|+|+++|++++.+++||+|+...  
T Consensus        12 ~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~--   89 (323)
T cd05276          12 PEVLELGEVPKPAPGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAGVVVAVGPGVTGWKVGDRVCALL--   89 (323)
T ss_pred             cccceEEecCCCCCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEEEEEeeCCCCCCCCCCCEEEEec--
Confidence            55677777777888999999999999999999988766543 334578999999999999999999999999997431  


Q ss_pred             cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199           98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM  177 (344)
Q Consensus        98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~  177 (344)
                                                       .+|+|++|+.++++.++++|+++++.+++.++..+.++++++.....
T Consensus        90 ---------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~l~~~~~~a~~~~~~~~~  136 (323)
T cd05276          90 ---------------------------------AGGGYAEYVVVPAGQLLPVPEGLSLVEAAALPEVFFTAWQNLFQLGG  136 (323)
T ss_pred             ---------------------------------CCCceeEEEEcCHHHhccCCCCCCHHHHhhchhHHHHHHHHHHHhcC
Confidence                                             24889999999999999999999999999999999999999887777


Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---h--cCCccEEEEC
Q 019199          178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L--GKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~--~~~~dvvid~  251 (344)
                      +.++++|+|+|+ |++|++++++++..|++|+++++++++.+.+ +.+|++.+++....+....   .  .+++|+++|+
T Consensus       137 ~~~~~~vlv~g~~~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  215 (323)
T cd05276         137 LKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGSEEKLEAC-RALGADVAINYRTEDFAEEVKEATGGRGVDVILDM  215 (323)
T ss_pred             CCCCCEEEEEcCcChHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCchhHHHHHHHHhCCCCeEEEEEC
Confidence            799999999997 9999999999999999999999988888888 6789888888766443322   2  2579999999


Q ss_pred             CCCchhHHHHHHhcccCCEEEEEcCC--CccccCCcee-------e---eec----------hHhHHHHHHHHHhCCCcc
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASL-------N---IGG----------TKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~-------~---~~~----------~~~~~~~~~~~~~g~~~~  309 (344)
                      .|+.. +..++++++++|+++.+|..  ....++...+       .   ...          .+.++++++++.++++++
T Consensus       216 ~g~~~-~~~~~~~~~~~g~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  294 (323)
T cd05276         216 VGGDY-LARNLRALAPDGRLVLIGLLGGAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRP  294 (323)
T ss_pred             CchHH-HHHHHHhhccCCEEEEEecCCCCCCCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccC
Confidence            99876 88899999999999999864  1112221111       1   000          123567888898999876


Q ss_pred             c-eEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          310 Q-IETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       310 ~-~~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      . ++.|++++++++++.+.+++..+|+++
T Consensus       295 ~~~~~~~~~~~~~a~~~~~~~~~~~kvv~  323 (323)
T cd05276         295 VIDKVFPLEEAAEAHRRMESNEHIGKIVL  323 (323)
T ss_pred             CcceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence            5 489999999999999998887888874

PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding

>cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.2e-31  Score=242.13  Aligned_cols=285  Identities=28%  Similarity=0.426  Sum_probs=230.3

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      ..+.+++++.|++.+++|+||+.++++|++|+....+.......|.++|||++|+|+.+|+.++.+++||+|+..+..  
T Consensus        13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~--   90 (325)
T cd08271          13 LQLTLEEIEIPGPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAGVVVAVGAKVTGWKVGDRVAYHASL--   90 (325)
T ss_pred             ceeEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEEEEEEeCCCCCcCCCCCEEEeccCC--
Confidence            378899999999999999999999999999988876654322346789999999999999999999999999754311  


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ  179 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  179 (344)
                                                    ...|++++|+.++.+.++++|++++..+++.+++.+.+|++++.+...++
T Consensus        91 ------------------------------~~~~~~~s~~~~~~~~~~~ip~~~~~~~~a~~~~~~~~a~~~~~~~~~~~  140 (325)
T cd08271          91 ------------------------------ARGGSFAEYTVVDARAVLPLPDSLSFEEAAALPCAGLTAYQALFKKLRIE  140 (325)
T ss_pred             ------------------------------CCCccceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhcCCC
Confidence                                          13478999999999999999999999999999999999999998887779


Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh--cCCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL--GKSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~--~~~~dvvid~~g  253 (344)
                      +|++++|+|+ |.+|++++++++..|++|+++. .+++.+.+ +++|++.+++......   +.+.  .+++|+++++++
T Consensus       141 ~g~~vlI~g~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~  218 (325)
T cd08271         141 AGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYV-KSLGADHVIDYNDEDVCERIKEITGGRGVDAVLDTVG  218 (325)
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHH-HHcCCcEEecCCCccHHHHHHHHcCCCCCcEEEECCC
Confidence            9999999998 8999999999999999998876 56666666 6789988887765433   2222  257999999999


Q ss_pred             CchhHHHHHHhcccCCEEEEEcCCCcc-ccCCce----ee---------ee-------chHhHHHHHHHHHhCCCccc-e
Q 019199          254 GDHPFDAYMSLLKVAGVYVLVGFPSKV-KFSPAS----LN---------IG-------GTKDTQEMLEYCAAHKIYPQ-I  311 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~----~~---------~~-------~~~~~~~~~~~~~~g~~~~~-~  311 (344)
                      +.. ...++++++++|+++.+|..... ....+.    +.         ..       ..+.+.++++++.++.+.+. +
T Consensus       219 ~~~-~~~~~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~  297 (325)
T cd08271         219 GET-AAALAPTLAFNGHLVCIQGRPDASPDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVI  297 (325)
T ss_pred             cHh-HHHHHHhhccCCEEEEEcCCCCCcchhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccc
Confidence            876 67799999999999998644110 111111    00         01       01345778899999998764 4


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.|+++++.++++.+.+++..+|+++++
T Consensus       298 ~~~~~~~~~~a~~~~~~~~~~~kiv~~~  325 (325)
T cd08271         298 EVLPFEQLPEALRALKDRHTRGKIVVTI  325 (325)
T ss_pred             eEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence            8899999999999999888889998863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05286 QOR2 Quinone oxidoreductase (QOR)

Probab=100.00  E-value=3.5e-31  Score=240.71  Aligned_cols=282  Identities=26%  Similarity=0.359  Sum_probs=230.4

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      ...+.+.+.+.+.+.+++|+|++.++++|+.|+....+..+ ..+|.++|||++|+|+.+|++++++++||+|+...   
T Consensus        11 ~~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~~~~~-~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---   86 (320)
T cd05286          11 PEVLEYEDVPVPEPGPGEVLVRNTAIGVNFIDTYFRSGLYP-LPLPFVLGVEGAGVVEAVGPGVTGFKVGDRVAYAG---   86 (320)
T ss_pred             ccceEEeecCCCCCCCCEEEEEEEEeecCHHHHHHhcCCCC-CCCCccCCcceeEEEEEECCCCCCCCCCCEEEEec---
Confidence            34456666777778999999999999999999988877554 24577899999999999999999999999997421   


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (344)
                                                      ..|++++|+.++.+.++++|++++..+++.+++...+++.++.....+
T Consensus        87 --------------------------------~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~l~~~~~~  134 (320)
T cd05286          87 --------------------------------PPGAYAEYRVVPASRLVKLPDGISDETAAALLLQGLTAHYLLRETYPV  134 (320)
T ss_pred             --------------------------------CCCceeEEEEecHHHceeCCCCCCHHHHhhccchHHHHHHHHHHhcCC
Confidence                                            147899999999999999999999999999999999999998887778


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~  252 (344)
                      ++|++|+|+|+ |.+|++++++++.+|++|+++++++++.+.+ +++|++.+++.......   .+..  +++|+++|++
T Consensus       135 ~~g~~vlI~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vl~~~  213 (320)
T cd05286         135 KPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELA-RAAGADHVINYRDEDFVERVREITGGRGVDVVYDGV  213 (320)
T ss_pred             CCCCEEEEEcCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHCCCCEEEeCCchhHHHHHHHHcCCCCeeEEEECC
Confidence            99999999996 9999999999999999999999998888888 68999888877654332   2222  5799999999


Q ss_pred             CCchhHHHHHHhcccCCEEEEEcCCCc--cccCC-------ceee-------eech----HhHHHHHHHHHhCCCccce-
Q 019199          253 SGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSP-------ASLN-------IGGT----KDTQEMLEYCAAHKIYPQI-  311 (344)
Q Consensus       253 g~~~~~~~~~~~l~~~G~iv~~g~~~~--~~~~~-------~~~~-------~~~~----~~~~~~~~~~~~g~~~~~~-  311 (344)
                      ++. ....++++++++|+++.+|....  ..++.       ..+.       ....    +.++++++++.++.+.+.. 
T Consensus       214 ~~~-~~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  292 (320)
T cd05286         214 GKD-TFEGSLDSLRPRGTLVSFGNASGPVPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIG  292 (320)
T ss_pred             CcH-hHHHHHHhhccCcEEEEEecCCCCCCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCccc
Confidence            986 48999999999999999986411  11111       1111       0111    3456788899999887654 


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +.|++++++++++.+.+++..+|+++.
T Consensus       293 ~~~~~~~~~~a~~~~~~~~~~~~vv~~  319 (320)
T cd05286         293 KRYPLADAAQAHRDLESRKTTGKLLLI  319 (320)
T ss_pred             ceEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            889999999999999998888999874

Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone

>cd08251 polyketide_synthase polyketide synthase

Probab=100.00  E-value=3e-31  Score=239.71  Aligned_cols=273  Identities=23%  Similarity=0.346  Sum_probs=223.6

Q ss_pred             cCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCcccc
Q 019199           29 RRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCN  107 (344)
Q Consensus        29 ~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~  107 (344)
                      .|++.+++++||+.++++|+.|+..+.+..+ ...+|.++|||++|+|+++|+.++++++||+|+..+.           
T Consensus         2 ~p~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~-----------   70 (303)
T cd08251           2 VAPPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASGVVRAVGPHVTRLAVGDEVIAGTG-----------   70 (303)
T ss_pred             CCCCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeEEEEEECCCCCCCCCCCEEEEecC-----------
Confidence            5778999999999999999999988877653 2356789999999999999999999999999975431           


Q ss_pred             CCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          108 DGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       108 ~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                                            ...|+|++|+.++++.++++|++++..+++.++..+.+||.++. ...+++|++++|+
T Consensus        71 ----------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~aa~~~~~~~ta~~~l~-~~~~~~g~~vli~  127 (303)
T cd08251          71 ----------------------ESMGGHATLVTVPEDQVVRKPASLSFEEACALPVVFLTVIDAFA-RAGLAKGEHILIQ  127 (303)
T ss_pred             ----------------------CCCcceeeEEEccHHHeEECCCCCCHHHHHHhHHHHHHHHHHHH-hcCCCCCCEEEEe
Confidence                                  13588999999999999999999999999999999999999986 5566999999998


Q ss_pred             CC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEECCCCchhHHHH
Q 019199          188 GL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       188 Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~g~~~~~~~~  261 (344)
                      |+ |.+|++++++++.+|++|+++++.+++.+.+ +++|.+.+++....+..   .+..  +++|+++|++++. ....+
T Consensus       128 ~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~~~~~~~-~~~~~  205 (303)
T cd08251         128 TATGGTGLMAVQLARLKGAEIYATASSDDKLEYL-KQLGVPHVINYVEEDFEEEIMRLTGGRGVDVVINTLSGE-AIQKG  205 (303)
T ss_pred             cCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHcCCCCceEEEECCcHH-HHHHH
Confidence            76 9999999999999999999999998888888 68999988887654332   2222  5799999999765 48999


Q ss_pred             HHhcccCCEEEEEcCCC---ccccC--Cc----eee--------ee----chHhHHHHHHHHHhCCCccc-eEEEeCccH
Q 019199          262 MSLLKVAGVYVLVGFPS---KVKFS--PA----SLN--------IG----GTKDTQEMLEYCAAHKIYPQ-IETIPIENV  319 (344)
Q Consensus       262 ~~~l~~~G~iv~~g~~~---~~~~~--~~----~~~--------~~----~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~  319 (344)
                      +++++++|+++.+|...   ...++  .+    .+.        ..    ..+.+.++++++.++.+++. ++.|+++++
T Consensus       206 ~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~  285 (303)
T cd08251         206 LNCLAPGGRYVEIAMTALKSAPSVDLSVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDI  285 (303)
T ss_pred             HHHhccCcEEEEEeccCCCccCccChhHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHH
Confidence            99999999999987541   11111  11    000        01    11346778899999998765 488999999


Q ss_pred             HHHHHHHHcCCcceEEEE
Q 019199          320 NEALERLIKRDVKYRFVI  337 (344)
Q Consensus       320 ~~a~~~~~~~~~~gkvvi  337 (344)
                      +++++.+.+++..+|+++
T Consensus       286 ~~~~~~~~~~~~~~~iv~  303 (303)
T cd08251         286 GEAYRYLSDRENIGKVVV  303 (303)
T ss_pred             HHHHHHHHhCCCcceEeC
Confidence            999999999888888874

Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a

>cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=3.2e-31  Score=241.49  Aligned_cols=281  Identities=26%  Similarity=0.347  Sum_probs=225.2

Q ss_pred             cceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           23 SPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        23 ~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      ++.+.+.|.+.++||+|++.++++|++|.....|..+   ....|..+|||++|+|+++|+++.++++||+|+..+..  
T Consensus        15 ~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~--   92 (319)
T cd08267          15 LEVEVPIPTPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAGEVVAVGSGVTRFKVGDEVFGRLPP--   92 (319)
T ss_pred             ccccCCCCCCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeEEEEEeCCCCCCCCCCCEEEEeccC--
Confidence            7778899999999999999999999999988776542   12346789999999999999999999999999764321  


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCC
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQ  179 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~  179 (344)
                                                    ...|++++|+.++.+.++++|+++++.+++.+++.+.+||+++.....++
T Consensus        93 ------------------------------~~~g~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~~  142 (319)
T cd08267          93 ------------------------------KGGGALAEYVVAPESGLAKKPEGVSFEEAAALPVAGLTALQALRDAGKVK  142 (319)
T ss_pred             ------------------------------CCCceeeEEEEechhheEECCCCCCHHHHHhhhhHHHHHHHHHHHhcCCC
Confidence                                          13478999999999999999999999999999999999999998888779


Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh--cCCccEEEECCCCc-
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL--GKSLDFIIDTASGD-  255 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~dvvid~~g~~-  255 (344)
                      +|++|+|+|+ |.+|++++++|+.+|++|++++++ ++.+.+ +++|.+.+++....+.....  .+++|++++++++. 
T Consensus       143 ~g~~vli~g~~g~~g~~~~~la~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~  220 (319)
T cd08267         143 PGQRVLINGASGGVGTFAVQIAKALGAHVTGVCST-RNAELV-RSLGADEVIDYTTEDFVALTAGGEKYDVIFDAVGNSP  220 (319)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCH-HHHHHH-HHcCCCEeecCCCCCcchhccCCCCCcEEEECCCchH
Confidence            9999999998 999999999999999999998865 677777 78998888876543332222  25799999999853 


Q ss_pred             hhHHHHHHhcccCCEEEEEcCCCc---ccc-----CCc----eee----eechHhHHHHHHHHHhCCCccce-EEEeCcc
Q 019199          256 HPFDAYMSLLKVAGVYVLVGFPSK---VKF-----SPA----SLN----IGGTKDTQEMLEYCAAHKIYPQI-ETIPIEN  318 (344)
Q Consensus       256 ~~~~~~~~~l~~~G~iv~~g~~~~---~~~-----~~~----~~~----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~  318 (344)
                      ......+..++++|+++.+|....   ...     ...    .+.    ....+.++++++++.++.+++.. +.|++++
T Consensus       221 ~~~~~~~~~l~~~g~~i~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~  300 (319)
T cd08267         221 FSLYRASLALKPGGRYVSVGGGPSGLLLVLLLLPLTLGGGGRRLKFFLAKPNAEDLEQLAELVEEGKLKPVIDSVYPLED  300 (319)
T ss_pred             HHHHHhhhccCCCCEEEEeccccccccccccccchhhccccceEEEEEecCCHHHHHHHHHHHHCCCeeeeeeeEEcHHH
Confidence            223444445999999999986511   111     000    000    11256789999999999987654 8999999


Q ss_pred             HHHHHHHHHcCCcceEEEE
Q 019199          319 VNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       319 ~~~a~~~~~~~~~~gkvvi  337 (344)
                      ++++++.+.+++..+|+++
T Consensus       301 i~~a~~~~~~~~~~~~vvv  319 (319)
T cd08267         301 APEAYRRLKSGRARGKVVI  319 (319)
T ss_pred             HHHHHHHHhcCCCCCcEeC
Confidence            9999999999887888874

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=8.4e-31  Score=239.24  Aligned_cols=296  Identities=25%  Similarity=0.339  Sum_probs=233.9

Q ss_pred             eeeeecC--CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199           11 LGWAARD--PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus        11 ~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++++..+  .++.+++++.+.|.+.+++|+|++.++++|++|.....+... ....|.++|||++|+|+++|++++.|++
T Consensus         2 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~   81 (326)
T cd08272           2 KALVLESFGGPEVFELREVPRPQPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAGVVEAVGEGVTRFRV   81 (326)
T ss_pred             eEEEEccCCCchheEEeecCCCCCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeEEEEEeCCCCCCCCC
Confidence            3444432  234477777888889999999999999999999988766543 2335778999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+....                          +.  .  ...|+|++|+.++++.++++|++++..+++.+++.+.+
T Consensus        82 Gd~V~~~~~--------------------------~~--~--~~~g~~~~~~~v~~~~~~~~p~~~~~~~~~~~~~~~~~  131 (326)
T cd08272          82 GDEVYGCAG--------------------------GL--G--GLQGSLAEYAVVDARLLALKPANLSMREAAALPLVGIT  131 (326)
T ss_pred             CCEEEEccC--------------------------Cc--C--CCCCceeEEEEecHHHcccCCCCCCHHHHHHhHHHHHH
Confidence            999974320                          00  0  13578999999999999999999999999999999999


Q ss_pred             hHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc--
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG--  242 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~--  242 (344)
                      ||+++.+...+++|++++|+|+ |.+|++++++++.+|++|+.+++. ++.+.+ +++|.+.+++....  +.+.+..  
T Consensus       132 a~~~l~~~~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  209 (326)
T cd08272         132 AWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFA-RSLGADPIIYYRETVVEYVAEHTGG  209 (326)
T ss_pred             HHHHHHHhcCCCCCCEEEEEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHH-HHcCCCEEEecchhHHHHHHHhcCC
Confidence            9999877778899999999986 999999999999999999999888 888877 67998888876654  1222222  


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcccc-----CCceee--e------------echHhHHHHHHHHH
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKF-----SPASLN--I------------GGTKDTQEMLEYCA  303 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~-----~~~~~~--~------------~~~~~~~~~~~~~~  303 (344)
                      +++|+++|++++.. ...++++++++|+++.+|......+     ....+.  .            ...+.++.+++++.
T Consensus       210 ~~~d~v~~~~~~~~-~~~~~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~  288 (326)
T cd08272         210 RGFDVVFDTVGGET-LDASFEAVALYGRVVSILGGATHDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVE  288 (326)
T ss_pred             CCCcEEEECCChHH-HHHHHHHhccCCEEEEEecCCccchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHH
Confidence            47999999999865 8899999999999999874310000     000111  0            01346788889999


Q ss_pred             hCCCccc-e-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          304 AHKIYPQ-I-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       304 ~g~~~~~-~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++.+.+. . +.|++++++++++.+.+++..+|+++++
T Consensus       289 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~  326 (326)
T cd08272         289 RGQLRPLLDPRTFPLEEAAAAHARLESGSARGKIVIDV  326 (326)
T ss_pred             CCCcccccccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence            9998765 3 8899999999999999888789999864

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05288 PGDH Prostaglandin dehydrogenases

Probab=100.00  E-value=4.7e-31  Score=241.83  Aligned_cols=278  Identities=21%  Similarity=0.209  Sum_probs=220.6

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT   95 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~   95 (344)
                      ++.+++++.+.|++.+++|+||+.++++|+.|.....+...   ....+.++|+|++|+|+++|+.  +|++||+|+.  
T Consensus        17 ~~~~~~~~~~~p~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G~V~~~G~~--~~~~Gd~V~~--   92 (329)
T cd05288          17 PDDFELVEVPLPELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVGEVVESRSP--DFKVGDLVSG--   92 (329)
T ss_pred             ccceeEEeccCCCCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEEEEEecCCC--CCCCCCEEec--
Confidence            45688889999999999999999999999988655444321   1123467899999999999964  7999999962  


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec-ceEEEcCCCCC--cccccc-cchhhhHhHHH
Q 019199           96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIANDYP--LALAAP-LLCAGITVYTP  171 (344)
Q Consensus        96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~P~~~~--~~~aa~-l~~~~~ta~~~  171 (344)
                                                          .++|++|+.++. +.++++|++++  ..+++. +++.+.|||++
T Consensus        93 ------------------------------------~~~~~~~~~v~~~~~~~~lP~~~~~~~~~~~~~l~~~~~ta~~~  136 (329)
T cd05288          93 ------------------------------------FLGWQEYAVVDGASGLRKLDPSLGLPLSAYLGVLGMTGLTAYFG  136 (329)
T ss_pred             ------------------------------------ccceEEEEEecchhhcEECCcccCCCHHHHHHhcccHHHHHHHH
Confidence                                                247999999999 99999999995  444544 89999999999


Q ss_pred             HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---h-cCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---L-GKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~-~~~~d  246 (344)
                      +.....+.+|++|||+|+ |.+|++++++++..|++|+++++++++.+.+.+.+|++.+++.++.+....   . .+++|
T Consensus       137 l~~~~~~~~~~~vlI~g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~v~~~~~~~~d  216 (329)
T cd05288         137 LTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLVEELGFDAAINYKTPDLAEALKEAAPDGID  216 (329)
T ss_pred             HHhccCCCCCCEEEEecCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhhcCCceEEecCChhHHHHHHHhccCCce
Confidence            988777799999999996 999999999999999999999999988888843399999888876543322   2 36799


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCCc--c-c----cCC-------ceee---eec-----hHhHHHHHHHHHh
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK--V-K----FSP-------ASLN---IGG-----TKDTQEMLEYCAA  304 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~--~-~----~~~-------~~~~---~~~-----~~~~~~~~~~~~~  304 (344)
                      +++|++|+. .+..++++++++|+++.+|....  . .    ++.       ..+.   ...     .+.+.++++++.+
T Consensus       217 ~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  295 (329)
T cd05288         217 VYFDNVGGE-ILDAALTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAE  295 (329)
T ss_pred             EEEEcchHH-HHHHHHHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHC
Confidence            999999986 49999999999999999986511  1 0    000       0100   111     1457788899999


Q ss_pred             CCCccc-eEEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          305 HKIYPQ-IETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       305 g~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      +.+++. ...+++++++++++.+.+++..||+++
T Consensus       296 g~i~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv  329 (329)
T cd05288         296 GKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV  329 (329)
T ss_pred             CCccccccccccHHHHHHHHHHHhcCCCccceeC
Confidence            999764 467899999999999998888888874

Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino

>cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases

Probab=100.00  E-value=7.7e-31  Score=237.57  Aligned_cols=283  Identities=26%  Similarity=0.378  Sum_probs=229.5

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY   96 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~   96 (344)
                      ..+++++.+.|.+++++|+||+.++++|++|+....|...   ...+|.++|||++|+|+.+|+++..+++||+|+..+.
T Consensus        13 ~~~~~~~~~~~~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~G~~V~~~~~   92 (309)
T cd05289          13 EVLELADVPTPEPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTP   92 (309)
T ss_pred             cceeecccCCCCCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeEEEEeeCCCCCCCCCCCEEEEccC
Confidence            3355667777889999999999999999999988776542   2345789999999999999999999999999975431


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199           97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK  176 (344)
Q Consensus        97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~  176 (344)
                      .                                ...|+|++|+.++...++++|+++++..++.+++.+.++++++....
T Consensus        93 ~--------------------------------~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~  140 (309)
T cd05289          93 F--------------------------------TRGGAYAEYVVVPADELALKPANLSFEEAAALPLAGLTAWQALFELG  140 (309)
T ss_pred             C--------------------------------CCCCcceeEEEecHHHhccCCCCCCHHHHHhhhHHHHHHHHHHHhhc
Confidence            0                                12488999999999999999999999999999999999999998888


Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH-hcCCccEEEECCCC
Q 019199          177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA-LGKSLDFIIDTASG  254 (344)
Q Consensus       177 ~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-~~~~~dvvid~~g~  254 (344)
                      .+.+|++++|+|+ |.+|++++++++..|++|+++++++ +.+.+ +.+|.+.+++....+.... ..+++|+++|++++
T Consensus       141 ~~~~~~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~d~v~~~~~~  218 (309)
T cd05289         141 GLKAGQTVLIHGAAGGVGSFAVQLAKARGARVIATASAA-NADFL-RSLGADEVIDYTKGDFERAAAPGGVDAVLDTVGG  218 (309)
T ss_pred             CCCCCCEEEEecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHH-HHcCCCEEEeCCCCchhhccCCCCceEEEECCch
Confidence            7799999999997 9999999999999999999888777 77666 6789888887665433221 22579999999998


Q ss_pred             chhHHHHHHhcccCCEEEEEcCCCcccc---C-Cceee---e-echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHH
Q 019199          255 DHPFDAYMSLLKVAGVYVLVGFPSKVKF---S-PASLN---I-GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALER  325 (344)
Q Consensus       255 ~~~~~~~~~~l~~~G~iv~~g~~~~~~~---~-~~~~~---~-~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~  325 (344)
                      .. ...++++++++|+++.+|.......   . ...+.   . ...+.++++++++.++.+++.+ +.|++++++++++.
T Consensus       219 ~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~  297 (309)
T cd05289         219 ET-LARSLALVKPGGRLVSIAGPPPAEQAAKRRGVRAGFVFVEPDGEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHER  297 (309)
T ss_pred             HH-HHHHHHHHhcCcEEEEEcCCCcchhhhhhccceEEEEEecccHHHHHHHHHHHHCCCEEEeeccEEcHHHHHHHHHH
Confidence            85 8999999999999999986521110   0 01111   1 1156788999999999987654 89999999999999


Q ss_pred             HHcCCcceEEEE
Q 019199          326 LIKRDVKYRFVI  337 (344)
Q Consensus       326 ~~~~~~~gkvvi  337 (344)
                      +.+++..+|+++
T Consensus       298 ~~~~~~~~kvv~  309 (309)
T cd05289         298 LESGHARGKVVL  309 (309)
T ss_pred             HHhCCCCCcEeC
Confidence            998887788774

Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et

>cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=100.00  E-value=7.8e-31  Score=233.21  Aligned_cols=229  Identities=32%  Similarity=0.502  Sum_probs=196.6

Q ss_pred             cEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCC
Q 019199           36 DVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC  114 (344)
Q Consensus        36 evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c  114 (344)
                      ||+|++.++++|+.|+....|..+ ...+|.++|||++|+|+++|+.++.|++||+|+..+.. .|+.|.+|..    .|
T Consensus         1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G~v~~~G~~v~~~~~Gd~V~~~~~~-~~~~~~~~~~----~~   75 (271)
T cd05188           1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAGVVVEVGPGVTGVKVGDRVVVLPNL-GCGTCELCRE----LC   75 (271)
T ss_pred             CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEEEEEEECCCCCcCCCCCEEEEcCCC-CCCCCHHHHh----hC
Confidence            689999999999999998887654 34567899999999999999999999999999877654 8999999997    56


Q ss_pred             CccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHH
Q 019199          115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGH  194 (344)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~  194 (344)
                      ....+.       +....|++++|+.++.+.++++|+++++.+++.+++.+.|||+++.....+++|++|||+|+|++|+
T Consensus        76 ~~~~~~-------~~~~~g~~~~~~~v~~~~~~~ip~~~~~~~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~~G~  148 (271)
T cd05188          76 PGGGIL-------GEGLDGGFAEYVVVPADNLVPLPDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGGVGL  148 (271)
T ss_pred             CCCCEe-------ccccCCcceEEEEechHHeEECCCCCCHHHhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCHHHH
Confidence            544321       2234689999999999999999999999999999999999999998888889999999999866999


Q ss_pred             HHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh----cCCccEEEECCCCchhHHHHHHhcccCCE
Q 019199          195 MAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFIIDTASGDHPFDAYMSLLKVAGV  270 (344)
Q Consensus       195 ~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~dvvid~~g~~~~~~~~~~~l~~~G~  270 (344)
                      +++++++..|.+|+++++++++.+.+ +++|++.+++..+.+....+    .+++|+++++++.......++++++++|+
T Consensus       149 ~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~  227 (271)
T cd05188         149 LAAQLAKAAGARVIVTDRSDEKLELA-KELGADHVIDYKEEDLEEELRLTGGGGADVVIDAVGGPETLAQALRLLRPGGR  227 (271)
T ss_pred             HHHHHHHHcCCeEEEEcCCHHHHHHH-HHhCCceeccCCcCCHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHhcccCCE
Confidence            99999999999999999998888887 67888888877654333322    36799999999984459999999999999


Q ss_pred             EEEEcCC
Q 019199          271 YVLVGFP  277 (344)
Q Consensus       271 iv~~g~~  277 (344)
                      ++.+|..
T Consensus       228 ~v~~~~~  234 (271)
T cd05188         228 IVVVGGT  234 (271)
T ss_pred             EEEEccC
Confidence            9999865

The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro

>TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family

Probab=99.98  E-value=4.6e-30  Score=234.13  Aligned_cols=284  Identities=24%  Similarity=0.344  Sum_probs=229.4

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV   97 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~   97 (344)
                      +..+.+.+.+.|.+.+++++||+.++++|++|+....+... ...+|.++|||++|+|+.+|+.+.++++||+|+...  
T Consensus        12 ~~~~~~~~~~~~~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~vg~~~~~~~~Gd~V~~~~--   89 (325)
T TIGR02824        12 PEVLVLVEVPLPVPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAGEVVAVGEGVSRWKVGDRVCALV--   89 (325)
T ss_pred             cccceEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEEEEEEeCCCCCCCCCCCEEEEcc--
Confidence            44466666666778999999999999999999887766543 123468899999999999999999999999997421  


Q ss_pred             cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199           98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM  177 (344)
Q Consensus        98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~  177 (344)
                                                       .+|++++|+.++...++++|++++..+++++++.+.|+|.++.....
T Consensus        90 ---------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~ta~~~~~~~~~  136 (325)
T TIGR02824        90 ---------------------------------AGGGYAEYVAVPAGQVLPVPEGLSLVEAAALPETFFTVWSNLFQRGG  136 (325)
T ss_pred             ---------------------------------CCCcceeEEEecHHHcEeCCCCCCHHHHHhhhHHHHHHHHHHHHhcC
Confidence                                             23789999999999999999999999999999999999999877778


Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---hc--CCccEEEEC
Q 019199          178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---LG--KSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---~~--~~~dvvid~  251 (344)
                      +++|++++|+|+ |++|++++++++.+|++|+++++++++.+.+ +++|.+.+++....+....   ..  +++|+++++
T Consensus       137 ~~~~~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~~i~~  215 (325)
T TIGR02824       137 LKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSDEKCAAC-EALGADIAINYREEDFVEVVKAETGGKGVDVILDI  215 (325)
T ss_pred             CCCCCEEEEEcCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCchhHHHHHHHHcCCCCeEEEEEC
Confidence            899999999997 9999999999999999999999988888877 6899888877665443322   22  479999999


Q ss_pred             CCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee-------e---eec----------hHhHHHHHHHHHhCCCcc
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL-------N---IGG----------TKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~-------~---~~~----------~~~~~~~~~~~~~g~~~~  309 (344)
                      +++.. +..++++++++|+++.+|...  ...++...+       .   ...          ...+.++++++.++.+++
T Consensus       216 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~  294 (325)
T TIGR02824       216 VGGSY-LNRNIKALALDGRIVQIGFQGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRP  294 (325)
T ss_pred             CchHH-HHHHHHhhccCcEEEEEecCCCCcCCCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccC
Confidence            99864 889999999999999998541  112221111       0   011          123466778898998876


Q ss_pred             c-eEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          310 Q-IETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       310 ~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      . ++.|++++++++++.+.++...+|+++++
T Consensus       295 ~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~  325 (325)
T TIGR02824       295 VIDKVFPLEDAAQAHALMESGDHIGKIVLTV  325 (325)
T ss_pred             ccccEEeHHHHHHHHHHHHhCCCcceEEEeC
Confidence            4 48899999999999999888889999864

Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized.

>cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.98  E-value=7.6e-30  Score=232.99  Aligned_cols=288  Identities=23%  Similarity=0.333  Sum_probs=228.6

Q ss_pred             CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccc
Q 019199           19 SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYV   97 (344)
Q Consensus        19 ~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~   97 (344)
                      ...+++.+.+.|.+.+++++|++.++++|+.|.....+... ...+|.++|||++|+|+.+|++++.|++||+|+.++..
T Consensus        12 ~~~~~~~~~~~~~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~~~   91 (328)
T cd08268          12 PEVLRIEELPVPAPGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAGVVEAVGAGVTGFAVGDRVSVIPAA   91 (328)
T ss_pred             cceeEEeecCCCCCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEEEEEeeCCCCCcCCCCCEEEecccc
Confidence            34566677777889999999999999999999887766543 22447789999999999999999999999999764310


Q ss_pred             cCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccC
Q 019199           98 NSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM  177 (344)
Q Consensus        98 ~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~  177 (344)
                                                    +....|++++|+.++.+.++++|++++..+++.+++.+.++|.++.....
T Consensus        92 ------------------------------~~~~~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~  141 (328)
T cd08268          92 ------------------------------DLGQYGTYAEYALVPAAAVVKLPDGLSFVEAAALWMQYLTAYGALVELAG  141 (328)
T ss_pred             ------------------------------ccCCCccceEEEEechHhcEeCCCCCCHHHHHHhhhHHHHHHHHHHHhcC
Confidence                                          01234889999999999999999999999999999999999999887777


Q ss_pred             CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEEC
Q 019199          178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~  251 (344)
                      +.++++++|+|+ |.+|++++++++..|+++++++.++++.+.+ +++|.+.+++.+.....   .+..  +++|+++++
T Consensus       142 ~~~~~~vli~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~  220 (328)
T cd08268         142 LRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL-LALGAAHVIVTDEEDLVAEVLRITGGKGVDVVFDP  220 (328)
T ss_pred             CCCCCEEEEecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHcCCCEEEecCCccHHHHHHHHhCCCCceEEEEC
Confidence            789999999997 9999999999999999999999888888887 67898888877653322   2222  479999999


Q ss_pred             CCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc-------eee---ee----ch----HhHHHHHHHHHhCCCccc-
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA-------SLN---IG----GT----KDTQEMLEYCAAHKIYPQ-  310 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~~----~~----~~~~~~~~~~~~g~~~~~-  310 (344)
                      +++.. ...++++++++|+++.+|...  ...++..       .+.   ..    ..    +.++.+.+++.++.+.+. 
T Consensus       221 ~~~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  299 (328)
T cd08268         221 VGGPQ-FAKLADALAPGGTLVVYGALSGEPTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVV  299 (328)
T ss_pred             CchHh-HHHHHHhhccCCEEEEEEeCCCCCCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCc
Confidence            99865 899999999999999998541  1111111       100   11    11    234555666778888765 


Q ss_pred             eEEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          311 IETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +..|+++++.++++.+.+++..+|++++
T Consensus       300 ~~~~~~~~~~~~~~~~~~~~~~~~vv~~  327 (328)
T cd08268         300 DRVFPFDDIVEAHRYLESGQQIGKIVVT  327 (328)
T ss_pred             ccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            4889999999999999988888999875

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd05195 enoyl_red enoyl reductase of polyketide synthase

Probab=99.97  E-value=2.7e-29  Score=225.12  Aligned_cols=263  Identities=25%  Similarity=0.328  Sum_probs=216.5

Q ss_pred             CcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCC
Q 019199           35 DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC  114 (344)
Q Consensus        35 ~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c  114 (344)
                      +||+||+.++++|++|+....|..  ..+|.++|||++|+|+++|+.+..+++||+|+.+.                   
T Consensus         1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G~v~~~g~~~~~~~~Gd~V~~~~-------------------   59 (293)
T cd05195           1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSGIVTRVGSGVTGLKVGDRVMGLA-------------------   59 (293)
T ss_pred             CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeEEEEeecCCccCCCCCCEEEEEe-------------------
Confidence            589999999999999999887654  24578999999999999999999999999997532                   


Q ss_pred             CccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHH
Q 019199          115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLG  193 (344)
Q Consensus       115 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G  193 (344)
                                       .|+|++|+.++.+.++++|+++++.+++.+++.+.|++.++.....+++|++|+|+|+ |.+|
T Consensus        60 -----------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g  122 (293)
T cd05195          60 -----------------PGAFATHVRVDARLVVKIPDSLSFEEAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVG  122 (293)
T ss_pred             -----------------cCcccceEEechhheEeCCCCCCHHHHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHH
Confidence                             3789999999999999999999999999999999999999877777799999999986 9999


Q ss_pred             HHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--CcEEEeCCCHHHHHH---h--cCCccEEEECCCCchhHHHHHHhcc
Q 019199          194 HMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--ADKFVVSSDLEQMKA---L--GKSLDFIIDTASGDHPFDAYMSLLK  266 (344)
Q Consensus       194 ~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~---~--~~~~dvvid~~g~~~~~~~~~~~l~  266 (344)
                      ++++++++.+|++|+++++++++.+.+ +..|  ++.+++....+...+   .  .+++|+++|++++. .+..++++++
T Consensus       123 ~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~  200 (293)
T cd05195         123 QAAIQLAQHLGAEVFATVGSEEKREFL-RELGGPVDHIFSSRDLSFADGILRATGGRGVDVVLNSLSGE-LLRASWRCLA  200 (293)
T ss_pred             HHHHHHHHHcCCEEEEEeCCHHHHHHH-HHhCCCcceEeecCchhHHHHHHHHhCCCCceEEEeCCCch-HHHHHHHhcc
Confidence            999999999999999999988888888 4666  677887765443322   2  25799999999988 5999999999


Q ss_pred             cCCEEEEEcCCCc-----cccCCce----eee------------echHhHHHHHHHHHhCCCccce-EEEeCccHHHHHH
Q 019199          267 VAGVYVLVGFPSK-----VKFSPAS----LNI------------GGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALE  324 (344)
Q Consensus       267 ~~G~iv~~g~~~~-----~~~~~~~----~~~------------~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~  324 (344)
                      ++|+++.+|....     .....+.    +..            ...+.+.++++++.++.+++.. ..+++++++++++
T Consensus       201 ~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~  280 (293)
T cd05195         201 PFGRFVEIGKRDILSNSKLGMRPFLRNVSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFR  280 (293)
T ss_pred             cCceEEEeeccccccCCccchhhhccCCeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHH
Confidence            9999999986511     1111111    110            0123567888999999998754 7899999999999


Q ss_pred             HHHcCCcceEEEE
Q 019199          325 RLIKRDVKYRFVI  337 (344)
Q Consensus       325 ~~~~~~~~gkvvi  337 (344)
                      .+.+++..+|+++
T Consensus       281 ~~~~~~~~~~ivv  293 (293)
T cd05195         281 LMQSGKHIGKVVL  293 (293)
T ss_pred             HHhcCCCCceecC
Confidence            9999888888874

Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase

>cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family

Probab=99.97  E-value=7.7e-29  Score=227.54  Aligned_cols=282  Identities=29%  Similarity=0.396  Sum_probs=222.5

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      ..+.+.+.+.|+|.+++|+||+.++++|+.|+....+... ....|.++|||++|+|+.+|++++++++||+|+.+.   
T Consensus        12 ~~~~~~~~~~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~---   88 (337)
T cd08275          12 DKLKVEKEALPEPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLT---   88 (337)
T ss_pred             cceEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEEEEEEECCCCcCCCCCCEEEEec---
Confidence            4567777777889999999999999999999988776543 234577899999999999999999999999997532   


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (344)
                                                      ..|+|++|+.++.+.++++|++++..+++.+++.+.++|+++.....+
T Consensus        89 --------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~~~~  136 (337)
T cd08275          89 --------------------------------RFGGYAEVVNVPADQVFPLPDGMSFEEAAAFPVNYLTAYYALFELGNL  136 (337)
T ss_pred             --------------------------------CCCeeeeEEEecHHHeEECCCCCCHHHHhhhhHHHHHHHHHHHHhhCC
Confidence                                            237899999999999999999999999999999999999998877778


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcEEEeCCCHHH---HHHh-cCCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKFVVSSDLEQ---MKAL-GKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~~~~dvvid~~  252 (344)
                      ++|++|+|+|+ |.+|++++++++.+ ..+.++.. .+++.+.+ +.+|.+.+++....+.   +.+. .+++|+++|++
T Consensus       137 ~~~~~vli~g~~g~~g~~~~~~a~~~-~~~~~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~d~v~~~~  214 (337)
T cd08275         137 RPGQSVLVHSAAGGVGLAAGQLCKTV-PNVTVVGTASASKHEAL-KENGVTHVIDYRTQDYVEEVKKISPEGVDIVLDAL  214 (337)
T ss_pred             CCCCEEEEEcCcchHHHHHHHHHHHc-cCcEEEEeCCHHHHHHH-HHcCCcEEeeCCCCcHHHHHHHHhCCCceEEEECC
Confidence            99999999998 99999999999998 32223322 34466666 6789888887765332   2222 36799999999


Q ss_pred             CCchhHHHHHHhcccCCEEEEEcCCC---ccccC----------------------Cceee---ee----c----hHhHH
Q 019199          253 SGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFS----------------------PASLN---IG----G----TKDTQ  296 (344)
Q Consensus       253 g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~----------------------~~~~~---~~----~----~~~~~  296 (344)
                      |+.. ...++++++++|+++.+|...   ...+.                      ...+.   ..    .    ...+.
T Consensus       215 g~~~-~~~~~~~l~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  293 (337)
T cd08275         215 GGED-TRKSYDLLKPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMD  293 (337)
T ss_pred             cHHH-HHHHHHhhccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHH
Confidence            9865 899999999999999998541   11111                      00000   00    0    12467


Q ss_pred             HHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          297 EMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       297 ~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++++++.++.+.+.. +.|++++++++++.+.+++..+|+++.+
T Consensus       294 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~  337 (337)
T cd08275         294 KLLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP  337 (337)
T ss_pred             HHHHHHHCCCCCCceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence            788899999987754 8899999999999999988889999863

This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh

>cd08241 QOR1 Quinone oxidoreductase (QOR)

Probab=99.97  E-value=6e-29  Score=226.43  Aligned_cols=282  Identities=30%  Similarity=0.487  Sum_probs=226.9

Q ss_pred             CCCCccceeeccCCCC-CCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEEec
Q 019199           18 PSGVLSPYSFNRRAVG-SDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT   95 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~-~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~   95 (344)
                      .+..+++.+.+ |.+. +++++|++.++++|++|+....+... ....|.++|||++|+|+.+|++++.+++||+|+..+
T Consensus        11 ~~~~~~~~~~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G~v~~~g~~~~~~~~G~~V~~~~   89 (323)
T cd08241          11 GPEDLVLEEVP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAGVVEAVGEGVTGFKVGDRVVALT   89 (323)
T ss_pred             CcceeEEecCC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEEEEEEeCCCCCCCCCCCEEEEec
Confidence            34556666666 6665 59999999999999999988776543 223466899999999999999999999999997532


Q ss_pred             cccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc
Q 019199           96 YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH  175 (344)
Q Consensus        96 ~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~  175 (344)
                                                         ..|++++|+.++.+.++++|++++..+++.+...+.+|+.++...
T Consensus        90 -----------------------------------~~~~~~~~~~~~~~~~~~ip~~~~~~~~~~~~~~~~~a~~~~~~~  134 (323)
T cd08241          90 -----------------------------------GQGGFAEEVVVPAAAVFPLPDGLSFEEAAALPVTYGTAYHALVRR  134 (323)
T ss_pred             -----------------------------------CCceeEEEEEcCHHHceeCCCCCCHHHHhhhhhHHHHHHHHHHHh
Confidence                                               147899999999999999999999999988999999999998766


Q ss_pred             cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEE
Q 019199          176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFII  249 (344)
Q Consensus       176 ~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvi  249 (344)
                      ..+.+|++++|+|+ |.+|++++++++..|++|++++.++++.+.+ +++|++.+++....+.   +.+..  +++|+++
T Consensus       135 ~~~~~~~~vli~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~i~~~~~~~~~d~v~  213 (323)
T cd08241         135 ARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAASSEEKLALA-RALGADHVIDYRDPDLRERVKALTGGRGVDVVY  213 (323)
T ss_pred             cCCCCCCEEEEEcCCchHHHHHHHHHHHhCCEEEEEeCCHHHHHHH-HHcCCceeeecCCccHHHHHHHHcCCCCcEEEE
Confidence            77799999999998 9999999999999999999999998888888 6789888887665433   22232  5799999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCC-Cccc-cCC-------ceee---ee---------chHhHHHHHHHHHhCCCc
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVK-FSP-------ASLN---IG---------GTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~-~~~-------~~~~---~~---------~~~~~~~~~~~~~~g~~~  308 (344)
                      +++|+.. ...++++++++|+++.+|.. .... +..       ..+.   ..         ..+.++++++++.++.++
T Consensus       214 ~~~g~~~-~~~~~~~~~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  292 (323)
T cd08241         214 DPVGGDV-FEASLRSLAWGGRLLVIGFASGEIPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIR  292 (323)
T ss_pred             ECccHHH-HHHHHHhhccCCEEEEEccCCCCcCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcc
Confidence            9999854 88999999999999999864 1111 111       1111   00         124578899999999887


Q ss_pred             cce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          309 PQI-ETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       309 ~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                      +.. +.|+++++.++++.+.++...+|+++
T Consensus       293 ~~~~~~~~~~~~~~~~~~~~~~~~~~~vvv  322 (323)
T cd08241         293 PHVSAVFPLEQAAEALRALADRKATGKVVL  322 (323)
T ss_pred             cccceEEcHHHHHHHHHHHHhCCCCCcEEe
Confidence            654 88999999999999998887889886

QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic

>smart00829 PKS_ER Enoylreductase

Probab=99.97  E-value=1.9e-28  Score=219.47  Aligned_cols=258  Identities=24%  Similarity=0.379  Sum_probs=211.0

Q ss_pred             EEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccc
Q 019199           39 ITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV  118 (344)
Q Consensus        39 V~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~  118 (344)
                      ||+.++++|++|+....|..+   .|.++|||++|+|+++|+.++.|++||+|+.+.                       
T Consensus         2 i~v~~~~i~~~d~~~~~g~~~---~~~~~g~e~~G~v~~~G~~~~~~~~Gd~V~~~~-----------------------   55 (288)
T smart00829        2 VEVRAAGLNFRDVLIALGLLP---GEAVLGGECAGVVTRVGPGVTGLAVGDRVMGLA-----------------------   55 (288)
T ss_pred             eeEEEEecCHHHHHHhcCCCC---CCCCCCceeEEEEEeeCCCCcCCCCCCEEEEEc-----------------------
Confidence            899999999999988876543   357899999999999999999999999997532                       


Q ss_pred             cccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHH
Q 019199          119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAV  197 (344)
Q Consensus       119 ~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai  197 (344)
                                   .|+|++|+.++.+.++++|+++++.+++.+++.+.+++.++.....+.+|++|+|+|+ |.+|++++
T Consensus        56 -------------~g~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~  122 (288)
T smart00829       56 -------------PGSFATYVRTDARLVVPIPDGLSFEEAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAI  122 (288)
T ss_pred             -------------CCceeeEEEccHHHeEECCCCCCHHHHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHH
Confidence                         3789999999999999999999999999999999999999867677799999999986 99999999


Q ss_pred             HHHHHCCCeEEEEeCCchhHHHHHHhCCC--cEEEeCCCHHHHH---Hh--cCCccEEEECCCCchhHHHHHHhcccCCE
Q 019199          198 KFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKFVVSSDLEQMK---AL--GKSLDFIIDTASGDHPFDAYMSLLKVAGV  270 (344)
Q Consensus       198 ~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~~---~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~  270 (344)
                      ++++.+|++|+++++++++.+.+ +++|+  +.+++..+.+..+   +.  .+++|+++|++++. .+..++++++++|+
T Consensus       123 ~~a~~~g~~v~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~d~vi~~~~~~-~~~~~~~~l~~~g~  200 (288)
T smart00829      123 QLAQHLGAEVFATAGSPEKRDFL-RELGIPDDHIFSSRDLSFADEILRATGGRGVDVVLNSLAGE-FLDASLRCLAPGGR  200 (288)
T ss_pred             HHHHHcCCEEEEEeCCHHHHHHH-HHcCCChhheeeCCCccHHHHHHHHhCCCCcEEEEeCCCHH-HHHHHHHhccCCcE
Confidence            99999999999999999998888 68997  7778766544332   22  24799999999965 48899999999999


Q ss_pred             EEEEcCCC---ccccCCcee------ee--------e---chHhHHHHHHHHHhCCCccc-eEEEeCccHHHHHHHHHcC
Q 019199          271 YVLVGFPS---KVKFSPASL------NI--------G---GTKDTQEMLEYCAAHKIYPQ-IETIPIENVNEALERLIKR  329 (344)
Q Consensus       271 iv~~g~~~---~~~~~~~~~------~~--------~---~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~a~~~~~~~  329 (344)
                      ++.+|...   ...++...+      ..        .   ..+.+..+++++.++.+.+. ++.|++++++++++.+..+
T Consensus       201 ~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  280 (288)
T smart00829      201 FVEIGKRDIRDNSQLGMAPFRRNVSYHAVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQG  280 (288)
T ss_pred             EEEEcCcCCccccccchhhhcCCceEEEEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcC
Confidence            99998541   112221111      00        0   11346778888989988764 4889999999999999988


Q ss_pred             CcceEEEE
Q 019199          330 DVKYRFVI  337 (344)
Q Consensus       330 ~~~gkvvi  337 (344)
                      +..+|+++
T Consensus       281 ~~~~~ivv  288 (288)
T smart00829      281 KHIGKVVL  288 (288)
T ss_pred             CCcceEeC
Confidence            77788764

Enoylreductase in Polyketide synthases.

>KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only]

Probab=99.95  E-value=1.1e-26  Score=198.00  Aligned_cols=270  Identities=20%  Similarity=0.199  Sum_probs=210.5

Q ss_pred             CCCCCCcEEEEEeeeecccchhhhhcCCCCCC-CCCC-----CcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCC
Q 019199           30 RAVGSDDVSITITHCGVCYADVIWTRNKHGDS-KYPL-----VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDC  103 (344)
Q Consensus        30 p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~-~~p~-----~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c  103 (344)
                      .++.+++||||..|.+..|.....+....+.. -.|.     +.| .++|+|++  |...+|++||.|...         
T Consensus        33 ~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g-~GV~kVi~--S~~~~~~~GD~v~g~---------  100 (343)
T KOG1196|consen   33 VPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDG-FGVAKVID--SGHPNYKKGDLVWGI---------  100 (343)
T ss_pred             CCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecC-CceEEEEe--cCCCCCCcCceEEEe---------
Confidence            34699999999999999887765443322211 1122     233 77999999  466889999999531         


Q ss_pred             ccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce--EEEcCC--CCCccccc-ccchhhhHhHHHHHhccCC
Q 019199          104 EYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYKIAN--DYPLALAA-PLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus       104 ~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~~P~--~~~~~~aa-~l~~~~~ta~~~l~~~~~~  178 (344)
                                                   =+|.||.++++..  .+++|.  ++++.-.. .+..+..|||..+.+....
T Consensus       101 -----------------------------~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~p  151 (343)
T KOG1196|consen  101 -----------------------------VGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSP  151 (343)
T ss_pred             -----------------------------ccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCC
Confidence                                         2699999887654  556554  44444443 6888899999999999988


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH-H---HHHh-cCCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE-Q---MKAL-GKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~---~~~~-~~~~dvvid~~  252 (344)
                      +.|++|+|-|| |++|+.+.|+|+.+||+|+.++.++|+...+..++|.+..||+.++. .   +++. ..++|+.||.+
T Consensus       152 k~geTv~VSaAsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNV  231 (343)
T KOG1196|consen  152 KKGETVFVSAASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENV  231 (343)
T ss_pred             CCCCEEEEeeccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEecc
Confidence            99999999987 99999999999999999999999999999998889999999998763 2   2222 37999999999


Q ss_pred             CCchhHHHHHHhcccCCEEEEEcCCC----ccc--cCCceee----------------eechHhHHHHHHHHHhCCCccc
Q 019199          253 SGDHPFDAYMSLLKVAGVYVLVGFPS----KVK--FSPASLN----------------IGGTKDTQEMLEYCAAHKIYPQ  310 (344)
Q Consensus       253 g~~~~~~~~~~~l~~~G~iv~~g~~~----~~~--~~~~~~~----------------~~~~~~~~~~~~~~~~g~~~~~  310 (344)
                      |+.. ++.++..|+..||++.+|+-.    ..+  +......                ....+.++++..++++|+|+-.
T Consensus       232 GG~~-lDavl~nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~  310 (343)
T KOG1196|consen  232 GGKM-LDAVLLNMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYV  310 (343)
T ss_pred             CcHH-HHHHHHhhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEe
Confidence            9998 999999999999999999751    111  1111111                2223567889999999999876


Q ss_pred             eEEE-eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          311 IETI-PIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       311 ~~~~-~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      ..++ .+|+.++||..|.++++.||-++.+..
T Consensus       311 edi~~Glen~P~A~vglf~GkNvGKqiv~va~  342 (343)
T KOG1196|consen  311 EDIADGLENGPSALVGLFHGKNVGKQLVKVAR  342 (343)
T ss_pred             hhHHHHHhccHHHHHHHhccCcccceEEEeec
Confidence            5443 699999999999999999999998864

>cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members

Probab=99.94  E-value=8.9e-26  Score=201.95  Aligned_cols=233  Identities=26%  Similarity=0.376  Sum_probs=186.7

Q ss_pred             CCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEE
Q 019199           61 SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIV  140 (344)
Q Consensus        61 ~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~  140 (344)
                      .++|.++|||++|+|+++|+++++|++||+|+..                                      +.|++|++
T Consensus        18 ~~~p~v~g~e~~G~V~~vG~~v~~~~~Gd~V~~~--------------------------------------~~~~~~~~   59 (277)
T cd08255          18 LPLPLPPGYSSVGRVVEVGSGVTGFKPGDRVFCF--------------------------------------GPHAERVV   59 (277)
T ss_pred             CcCCcccCcceeEEEEEeCCCCCCCCCCCEEEec--------------------------------------CCcceEEE
Confidence            4578999999999999999999999999999642                                      35899999


Q ss_pred             EecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHH
Q 019199          141 VHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEE  219 (344)
Q Consensus       141 ~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~  219 (344)
                      ++.+.++++|+++++.+++.+ +.+.|||+++. ...+++|++++|+|+|.+|++++++|+.+|++ |+++++++++.+.
T Consensus        60 v~~~~~~~ip~~l~~~~aa~~-~~~~ta~~~~~-~~~~~~g~~vlI~g~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~  137 (277)
T cd08255          60 VPANLLVPLPDGLPPERAALT-ALAATALNGVR-DAEPRLGERVAVVGLGLVGLLAAQLAKAAGAREVVGVDPDAARREL  137 (277)
T ss_pred             cCHHHeeECcCCCCHHHhHHH-HHHHHHHHHHH-hcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCcEEEECCCHHHHHH
Confidence            999999999999999999888 78999999986 45669999999998899999999999999997 9999999998886


Q ss_pred             HHHhCC-CcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccc------cC--Cceee--
Q 019199          220 ALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVK------FS--PASLN--  288 (344)
Q Consensus       220 ~~~~~g-~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~------~~--~~~~~--  288 (344)
                      + +++| ++.+++.... ..  ..+++|++||+++........+++++++|+++.+|......      +.  ...+.  
T Consensus       138 ~-~~~g~~~~~~~~~~~-~~--~~~~~d~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~~~~~~~  213 (277)
T cd08255         138 A-EALGPADPVAADTAD-EI--GGRGADVVIEASGSPSALETALRLLRDRGRVVLVGWYGLKPLLLGEEFHFKRLPIRSS  213 (277)
T ss_pred             H-HHcCCCccccccchh-hh--cCCCCCEEEEccCChHHHHHHHHHhcCCcEEEEEeccCCCccccHHHHHhccCeEEee
Confidence            6 6888 5655543321 11  23579999999887666899999999999999998651111      00  00111  


Q ss_pred             -ee------------chHhHHHHHHHHHhCCCccc-eEEEeCccHHHHHHHHHcC-CcceEEEE
Q 019199          289 -IG------------GTKDTQEMLEYCAAHKIYPQ-IETIPIENVNEALERLIKR-DVKYRFVI  337 (344)
Q Consensus       289 -~~------------~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~~a~~~~~~~-~~~gkvvi  337 (344)
                       ..            ..+.++++++++.++.+++. .+.|++++++++++.+.++ ....|+++
T Consensus       214 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~  277 (277)
T cd08255         214 QVYGIGRYDRPRRWTEARNLEEALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL  277 (277)
T ss_pred             cccccccccccccccccccHHHHHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence             00            12568899999999998775 4889999999999999887 33467764

This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD

>KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism]

Probab=99.93  E-value=1.2e-25  Score=218.36  Aligned_cols=277  Identities=16%  Similarity=0.204  Sum_probs=223.0

Q ss_pred             CCccceeeccC---CCCCCcEEEEEeeeecccchhhhhcCCCCCCCCC-------CCcccccceEEEEecCCCCCCCCCC
Q 019199           20 GVLSPYSFNRR---AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYP-------LVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        20 ~~~~~~~~~~p---~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p-------~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      ..++|.+.+..   +..++.=+-.|-|+.+|..|+....|+.+...+|       .++|-||+|+          ..-|.
T Consensus      1427 sSlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsGR----------d~~Gr 1496 (2376)
T KOG1202|consen 1427 SSLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSGR----------DASGR 1496 (2376)
T ss_pred             cceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeeccc----------cCCCc
Confidence            34555555554   3477778999999999999999999988644443       5789999997          45699


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      ||...                                   ...-++++.+.++.+.+|.+|++.++++|++.||.+.|||
T Consensus      1497 RvM~m-----------------------------------vpAksLATt~l~~rd~lWevP~~WTleeAstVP~VYsTaY 1541 (2376)
T KOG1202|consen 1497 RVMGM-----------------------------------VPAKSLATTVLASRDFLWEVPSKWTLEEASTVPVVYSTAY 1541 (2376)
T ss_pred             EEEEe-----------------------------------eehhhhhhhhhcchhhhhhCCcccchhhcccCceEeeeeh
Confidence            99743                                   2345789999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---CcEEEeCCCHHHH---HH--
Q 019199          170 TPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQM---KA--  240 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~---~~--  240 (344)
                      +++...++.++|+++||++ +|++|++||.+|.+.|++|+-++.+.|+++.+++.|+   ...+-|.++.++.   ..  
T Consensus      1542 YALVvRG~mkkGekiLIHaGsGGVGQAAIaiALa~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdtsFEq~vl~~T 1621 (2376)
T KOG1202|consen 1542 YALVVRGQMKKGEKILIHAGSGGVGQAAIAIALAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDTSFEQHVLWHT 1621 (2376)
T ss_pred             hhhhhhccccCCcEEEEecCCCchhHHHHHHHHHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccccHHHHHHHHh
Confidence            9999999999999999985 5999999999999999999999999999999988887   3444455543321   11  


Q ss_pred             hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee--------------eechHhHHHHHHHHH
Q 019199          241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN--------------IGGTKDTQEMLEYCA  303 (344)
Q Consensus       241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~--------------~~~~~~~~~~~~~~~  303 (344)
                      .++|+|+|+|....+. ++..++||+..||+..+|-.   .+.++.+.-+.              .+..+++.++..+++
T Consensus      1622 ~GrGVdlVLNSLaeEk-LQASiRCLa~~GRFLEIGKfDLSqNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~ 1700 (2376)
T KOG1202|consen 1622 KGRGVDLVLNSLAEEK-LQASIRCLALHGRFLEIGKFDLSQNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVA 1700 (2376)
T ss_pred             cCCCeeeehhhhhHHH-HHHHHHHHHhcCeeeeecceecccCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHH
Confidence            2479999999999887 99999999999999999865   33333333222              444567888877776


Q ss_pred             hC----CCccc-eEEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          304 AH----KIYPQ-IETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       304 ~g----~~~~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      +|    ..+|. .++|+-.++++||++|.++++.||||+++-.+
T Consensus      1701 eGIksGvV~PL~ttvF~~~qvE~AFRfMasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1701 EGIKSGVVRPLPTTVFHGQQVEDAFRFMASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred             hhhccCceeccccccccHHHHHHHHHHHhccCccceEEEEEccc
Confidence            65    44565 48999999999999999999999999998643

>PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1

Probab=99.89  E-value=4.9e-23  Score=157.69  Aligned_cols=108  Identities=34%  Similarity=0.657  Sum_probs=92.4

Q ss_pred             CCcEEEEEeeeecccchhhhhcCC-CCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCC
Q 019199           34 SDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEV  112 (344)
Q Consensus        34 ~~evlV~v~~~~i~~~D~~~~~g~-~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~  112 (344)
                      |+||+||+.++|||++|++.+.|. .....+|.++|||++|+|+++|+++++|++||+|++.+.. .|+.|.+|..+.++
T Consensus         1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~~~Gd~V~~~~~~-~~~~c~~c~~~~~~   79 (109)
T PF08240_consen    1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVGVVVAVGPGVTDFKVGDRVVVSPNI-GCGECEYCLSGRPN   79 (109)
T ss_dssp             TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEEEEEEESTTTTSSGTT-EEEEESEE-ETSSSHHHHTTTGG
T ss_pred             CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceeeeeeeeccccccccccceeeeeccc-CccCchhhcCCccc
Confidence            689999999999999999999983 4467889999999999999999999999999999887765 59999999999999


Q ss_pred             CCCccccccccccCCCCccCCcceeEEEEecceEEEc
Q 019199          113 HCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI  149 (344)
Q Consensus       113 ~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~  149 (344)
                      .|.+....       +...+|+|+||+.+++++++|+
T Consensus        80 ~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~v  109 (109)
T PF08240_consen   80 LCPNPEVL-------GLGLDGGFAEYVVVPARNLVPV  109 (109)
T ss_dssp             GTTTBEET-------TTSSTCSSBSEEEEEGGGEEEE
T ss_pred             cCCCCCEe-------EcCCCCcccCeEEEehHHEEEC
Confidence            99775332       2236799999999999999985

1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A ....

>PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1

Probab=99.50  E-value=1.4e-13  Score=108.70  Aligned_cols=113  Identities=32%  Similarity=0.456  Sum_probs=91.1

Q ss_pred             hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEEECCCCchhHHHHHHhc
Q 019199          191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTASGDHPFDAYMSLL  265 (344)
Q Consensus       191 ~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvid~~g~~~~~~~~~~~l  265 (344)
                      ++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+.   +.+.+  +++|++|||+|++..++.+++++
T Consensus         1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~-~~~Ga~~~~~~~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l   79 (130)
T PF00107_consen    1 GVGLMAIQLAKAMGAKVIATDRSEEKLELA-KELGADHVIDYSDDDFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKLL   79 (130)
T ss_dssp             HHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTESEEEETTTSSHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHHE
T ss_pred             ChHHHHHHHHHHcCCEEEEEECCHHHHHHH-HhhcccccccccccccccccccccccccceEEEEecCcHHHHHHHHHHh
Confidence            589999999999999999999999999888 7999999999987643   44444  37999999999888899999999


Q ss_pred             ccCCEEEEEcCCC--ccccCCceee----------eechHhHHHHHHHHHh
Q 019199          266 KVAGVYVLVGFPS--KVKFSPASLN----------IGGTKDTQEMLEYCAA  304 (344)
Q Consensus       266 ~~~G~iv~~g~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~  304 (344)
                      +++|+++.+|...  ...++...+.          ...+++++++++++++
T Consensus        80 ~~~G~~v~vg~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~la~  130 (130)
T PF00107_consen   80 RPGGRIVVVGVYGGDPISFNLMNLMFKEITIRGSWGGSPEDFQEALQLLAQ  130 (130)
T ss_dssp             EEEEEEEEESSTSTSEEEEEHHHHHHTTEEEEEESSGGHHHHHHHHHHHH-
T ss_pred             ccCCEEEEEEccCCCCCCCCHHHHHhCCcEEEEEccCCHHHHHHHHHHhcC
Confidence            9999999999874  3333333332          2334788888887753

1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: alcohol + NAD = aldehyde or ketone + NADH Currently three structurally and catalytically different types of alcohol dehydrogenases are known: Zinc-containing 'long-chain' alcohol dehydrogenases. Insect-type, or 'short-chain' alcohol dehydrogenases. Iron-containing alcohol dehydrogenases. Zinc-containing ADH's [, ] are dimeric or tetrameric enzymes that bind two atoms of zinc per subunit. One of the zinc atom is essential for catalytic activity while the other is not. Both zinc atoms are coordinated by either cysteine or histidine residues; the catalytic zinc is coordinated by two cysteines and one histidine. Zinc-containing ADH's are found in bacteria, mammals, plants, and in fungi. In many species there is more than one isozyme (for example, humans have at least six isozymes, yeast have three, etc.). A number of other zinc-dependent dehydrogenases are closely related to zinc ADH [] and are included in this family. Sorbitol dehydrogenase (1.1.1.14 from EC) L-threonine 3-dehydrogenase (1.1.1.103 from EC) Glutathione-dependent formaldehyde dehydrogenase (1.1.1.284 from EC) Mannitol dehydrogenase (1.1.1.255 from EC) In addition, this family includes NADP-dependent quinone oxidoreductase (1.6.5.5 from EC), an enzyme found in bacteria (gene qor), in yeast and in mammals where, in some species such as rodents, it has been recruited as an eye lens protein and is known as zeta-crystallin []. The sequence of quinone oxidoreductase is distantly related to that other zinc-containing alcohol dehydrogenases and it lacks the zinc-ligand residues. The torpedo fish and mammalian synaptic vesicle membrane protein vat-1 is related to qor. This entry represents the cofactor-binding domain of these enzymes, which is normally found towards the C terminus. Structural studies indicate that it forms a classical Rossman fold that reversibly binds NAD(H) [, , ].; GO: 0008270 zinc ion binding, 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 3PI7_A 3COS_D 1VJ1_A 2ZB3_A 1PIW_B 1Q1N_A 1PS0_A 2EER_B 3KRT_A 1ZSY_A ....

>PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A

Probab=99.39  E-value=4e-13  Score=105.57  Aligned_cols=111  Identities=30%  Similarity=0.389  Sum_probs=76.6

Q ss_pred             CCCcEEEeCCCHHHHHHhcCCccEEEECCC--CchhHHHHHHhcccCCEEEEEcCC----Cc-cccCCceee-ee-----
Q 019199          224 LGADKFVVSSDLEQMKALGKSLDFIIDTAS--GDHPFDAYMSLLKVAGVYVLVGFP----SK-VKFSPASLN-IG-----  290 (344)
Q Consensus       224 ~g~~~~v~~~~~~~~~~~~~~~dvvid~~g--~~~~~~~~~~~l~~~G~iv~~g~~----~~-~~~~~~~~~-~~-----  290 (344)
                      +|+++++|+++.+.  .-.+++|+|||++|  ....+..++++| ++|+++.++..    .. ......... ..     
T Consensus         1 LGAd~vidy~~~~~--~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~~~~~~~~~~~~~~~~~~~~~~~~~~   77 (127)
T PF13602_consen    1 LGADEVIDYRDTDF--AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGGDLPSFARRLKGRSIRYSFLFSVDPN   77 (127)
T ss_dssp             CT-SEEEETTCSHH--HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-SHHHHHHHHHHCHHCEEECCC-H--H
T ss_pred             CCcCEEecCCCccc--cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECCcccchhhhhcccceEEEEEEecCCC
Confidence            68999999997666  33578999999999  555346677778 99999999841    00 001111111 11     


Q ss_pred             --chHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEE
Q 019199          291 --GTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVI  337 (344)
Q Consensus       291 --~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi  337 (344)
                        ..+.++++.+++++|+++|++ ++||++++.+|++.+.+++..||+||
T Consensus        78 ~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl  127 (127)
T PF13602_consen   78 AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL  127 (127)
T ss_dssp             HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred             chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence              234599999999999999988 79999999999999999999999996

>cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy)

Probab=99.30  E-value=2.2e-11  Score=113.03  Aligned_cols=162  Identities=15%  Similarity=0.126  Sum_probs=119.3

Q ss_pred             HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+. +...+|++|+|+|+|.+|+.+++.++.+|++|++++.++.|+..+ +.+|++.+ +.      .+..+++|+
T Consensus       189 ~~~i~r~t~~~l~GktVvViG~G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A-~~~G~~~~-~~------~e~v~~aDV  260 (413)
T cd00401         189 IDGIKRATDVMIAGKVAVVAGYGDVGKGCAQSLRGQGARVIVTEVDPICALQA-AMEGYEVM-TM------EEAVKEGDI  260 (413)
T ss_pred             HHHHHHhcCCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEECChhhHHHH-HhcCCEEc-cH------HHHHcCCCE
Confidence            5555554 444789999999999999999999999999999999999998888 68898543 21      122356899


Q ss_pred             EEECCCCchhHHHH-HHhcccCCEEEEEcCCCccccCCceee------e---ec--hHhHH--HHHHHHHhCCC-c--cc
Q 019199          248 IIDTASGDHPFDAY-MSLLKVAGVYVLVGFPSKVKFSPASLN------I---GG--TKDTQ--EMLEYCAAHKI-Y--PQ  310 (344)
Q Consensus       248 vid~~g~~~~~~~~-~~~l~~~G~iv~~g~~~~~~~~~~~~~------~---~~--~~~~~--~~~~~~~~g~~-~--~~  310 (344)
                      +|+++|+...+... ++.++++|+++.+|.. +..++...+.      .   ..  ...++  +.+.++++|.+ .  +.
T Consensus       261 VI~atG~~~~i~~~~l~~mk~GgilvnvG~~-~~eId~~~L~~~el~i~g~~~~~~~~~~~~g~aI~LLa~Grlvnl~~~  339 (413)
T cd00401         261 FVTTTGNKDIITGEHFEQMKDGAIVCNIGHF-DVEIDVKGLKENAVEVVNIKPQVDRYELPDGRRIILLAEGRLVNLGCA  339 (413)
T ss_pred             EEECCCCHHHHHHHHHhcCCCCcEEEEeCCC-CCccCHHHHHhhccEEEEccCCcceEEcCCcchhhhhhCcCCCCCccc
Confidence            99999998878776 9999999999999965 2222222111      1   11  11445  79999999998 2  22


Q ss_pred             e-EE-----EeCc-cHHHHHHHHHcCCcc-eEEEEEe
Q 019199          311 I-ET-----IPIE-NVNEALERLIKRDVK-YRFVIDI  339 (344)
Q Consensus       311 ~-~~-----~~~~-~~~~a~~~~~~~~~~-gkvvi~~  339 (344)
                      + |.     ++|+ |+.++++.+.+++.. -|+++..
T Consensus       340 ~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p  376 (413)
T cd00401         340 TGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLP  376 (413)
T ss_pred             CCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECC
Confidence            2 55     8899 999999998886543 4665543

The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+.

>PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional

Probab=99.11  E-value=2.6e-09  Score=101.69  Aligned_cols=130  Identities=20%  Similarity=0.193  Sum_probs=95.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCCH-------------HHH---HH-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDL-------------EQM---KA-  240 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~-------------~~~---~~-  240 (344)
                      .++++|+|+|+|.+|+.+++.|+.+|++|++++.++++++.+ +++|++.+ ++..+.             +..   .+ 
T Consensus       163 ~pg~kVlViGaG~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~a-eslGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~~~  241 (509)
T PRK09424        163 VPPAKVLVIGAGVAGLAAIGAAGSLGAIVRAFDTRPEVAEQV-ESMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEMAL  241 (509)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEEeccccccccccchhhhcchhHHHHHHHH
Confidence            689999999999999999999999999999999999999998 78999854 544221             111   11 


Q ss_pred             ---hcCCccEEEECCCCc-----hh-HHHHHHhcccCCEEEEEcCC--Cc--cccCCceee-------ee---ch-HhHH
Q 019199          241 ---LGKSLDFIIDTASGD-----HP-FDAYMSLLKVAGVYVLVGFP--SK--VKFSPASLN-------IG---GT-KDTQ  296 (344)
Q Consensus       241 ---~~~~~dvvid~~g~~-----~~-~~~~~~~l~~~G~iv~~g~~--~~--~~~~~~~~~-------~~---~~-~~~~  296 (344)
                         ..+++|++|+|++.+     .. .+++++.++++|+++++|..  .+  .+.+...+.       .+   .. +...
T Consensus       242 ~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e~t~~~~~v~~~~gVti~Gv~n~P~~~p~  321 (509)
T PRK09424        242 FAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCELTVPGEVVVTDNGVTIIGYTDLPSRLPT  321 (509)
T ss_pred             HHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcccccCccceEeECCEEEEEeCCCchhHHH
Confidence               125799999999963     34 49999999999999999974  22  233222221       11   12 3344


Q ss_pred             HHHHHHHhCCCcc
Q 019199          297 EMLEYCAAHKIYP  309 (344)
Q Consensus       297 ~~~~~~~~g~~~~  309 (344)
                      ++.+++.++.+..
T Consensus       322 ~As~lla~~~i~l  334 (509)
T PRK09424        322 QSSQLYGTNLVNL  334 (509)
T ss_pred             HHHHHHHhCCccH
Confidence            6899999988754

>PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional

Probab=98.59  E-value=9.4e-07  Score=82.60  Aligned_cols=103  Identities=17%  Similarity=0.210  Sum_probs=80.9

Q ss_pred             HhHHHHHhccC-CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199          167 TVYTPMMRHKM-NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       167 ta~~~l~~~~~-~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~  245 (344)
                      .+|+++.+... .-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|++ +.+      +.+...++
T Consensus       197 s~~~ai~rat~~~l~Gk~VlViG~G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A-~~~G~~-v~~------l~eal~~a  268 (425)
T PRK05476        197 SLLDGIKRATNVLIAGKVVVVAGYGDVGKGCAQRLRGLGARVIVTEVDPICALQA-AMDGFR-VMT------MEEAAELG  268 (425)
T ss_pred             hhHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCchhhHHH-HhcCCE-ecC------HHHHHhCC
Confidence            34677766633 2489999999999999999999999999999999988887666 355754 221      12333579


Q ss_pred             cEEEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~~  277 (344)
                      |++|+++|....+. ..+..+++++.++..|..
T Consensus       269 DVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~  301 (425)
T PRK05476        269 DIFVTATGNKDVITAEHMEAMKDGAILANIGHF  301 (425)
T ss_pred             CEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCC
Confidence            99999999877665 688999999999999865

>TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit

Probab=98.55  E-value=7.2e-07  Score=84.99  Aligned_cols=98  Identities=26%  Similarity=0.286  Sum_probs=77.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCC-------------HHH-------
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSD-------------LEQ-------  237 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~-------------~~~-------  237 (344)
                      .++++|+|+|+|.+|+++++.++.+|++|++++.++++++.+ +++|++.+ ++..+             .+.       
T Consensus       162 vp~akVlViGaG~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a-~~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~~  240 (511)
T TIGR00561       162 VPPAKVLVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEMEL  240 (511)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccccceeecCHHHHHHHHHH
Confidence            467999999999999999999999999999999999999888 67998653 22211             111       


Q ss_pred             HHHhcCCccEEEECC---CCch---hHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTA---SGDH---PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~---g~~~---~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..+..+++|++|+|+   |.+.   ..+..++.+++++.+++++..
T Consensus       241 ~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d  286 (511)
T TIGR00561       241 FAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAE  286 (511)
T ss_pred             HHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeC
Confidence            122236899999999   5432   478889999999999999755

In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff.

>PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed

Probab=98.54  E-value=1.4e-06  Score=77.60  Aligned_cols=159  Identities=18%  Similarity=0.250  Sum_probs=98.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh---CCCcEE-EeCCCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL---LGADKF-VVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~---~g~~~~-v~~~~~~~~~~~~~~~dvvid  250 (344)
                      .+++|++||.+|+|+ |..+.++++..|.  +|++++.+++.++.+++.   .|.+.+ +...+...+....+.+|+|+.
T Consensus        74 ~~~~g~~VLDiG~G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v~~~~~d~~~l~~~~~~fD~Vi~  152 (272)
T PRK11873         74 ELKPGETVLDLGSGG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNVEFRLGEIEALPVADNSVDVIIS  152 (272)
T ss_pred             cCCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCEEEEEcchhhCCCCCCceeEEEE
Confidence            348999999999987 8888888888775  699999999988777432   333211 111122111111257999985


Q ss_pred             CC------CCchhHHHHHHhcccCCEEEEEcCCCccccCCce-----ee---eechHhHHHHHHHHHhCCCcc---ce-E
Q 019199          251 TA------SGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPAS-----LN---IGGTKDTQEMLEYCAAHKIYP---QI-E  312 (344)
Q Consensus       251 ~~------g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~-----~~---~~~~~~~~~~~~~~~~g~~~~---~~-~  312 (344)
                      ..      .....++.+.+.|+|+|+++..+......++...     +.   .......+++.+++.+.-+..   .. .
T Consensus       153 ~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~l~~aGf~~v~i~~~~  232 (272)
T PRK11873        153 NCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGELPEEIRNDAELYAGCVAGALQEEEYLAMLAEAGFVDITIQPKR  232 (272)
T ss_pred             cCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCCCHHHHHhHHHHhccccCCCCHHHHHHHHHHCCCCceEEEecc
Confidence            43      2234589999999999999988755111111000     00   111224556777777644433   22 5


Q ss_pred             EEeCccHHHHHHHH--HcCCcceEEE
Q 019199          313 TIPIENVNEALERL--IKRDVKYRFV  336 (344)
Q Consensus       313 ~~~~~~~~~a~~~~--~~~~~~gkvv  336 (344)
                      .++++++.++++.+  .+++..++.+
T Consensus       233 ~~~l~~~~~~~~~~~~~~~~~~~~~~  258 (272)
T PRK11873        233 EYRIPDAREFLEDWGIAPGRQLDGYI  258 (272)
T ss_pred             ceecccHHHHHHHhccccccccCceE
Confidence            68899999999988  5554444444

>PRK08306 dipicolinate synthase subunit A; Reviewed

Probab=98.53  E-value=3.5e-06  Score=75.81  Aligned_cols=102  Identities=19%  Similarity=0.233  Sum_probs=79.2

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ++......-.+.+++|+|.|.+|+.+++.++.+|++|++++++.++.+.+ +.+|+..+ .   .+.+.+...++|++|+
T Consensus       142 a~~~~~~~l~g~kvlViG~G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~-~~~G~~~~-~---~~~l~~~l~~aDiVI~  216 (296)
T PRK08306        142 AIEHTPITIHGSNVLVLGFGRTGMTLARTLKALGANVTVGARKSAHLARI-TEMGLSPF-H---LSELAEEVGKIDIIFN  216 (296)
T ss_pred             HHHhCCCCCCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeee-c---HHHHHHHhCCCCEEEE
Confidence            34333332368999999999999999999999999999999998887777 57886532 2   2233444567999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++........++.+++++.+++++..
T Consensus       217 t~p~~~i~~~~l~~~~~g~vIIDla~~  243 (296)
T PRK08306        217 TIPALVLTKEVLSKMPPEALIIDLASK  243 (296)
T ss_pred             CCChhhhhHHHHHcCCCCcEEEEEccC
Confidence            998665457778889999999999876

>PLN02494 adenosylhomocysteinase

Probab=98.47  E-value=3.3e-06  Score=79.25  Aligned_cols=101  Identities=19%  Similarity=0.192  Sum_probs=78.8

Q ss_pred             HHHHHhcc-CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRHK-MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~~-~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+.. ..-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|+.. ++      +.+...+.|+
T Consensus       241 ~d~i~r~t~i~LaGKtVvViGyG~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA-~~~G~~v-v~------leEal~~ADV  312 (477)
T PLN02494        241 PDGLMRATDVMIAGKVAVICGYGDVGKGCAAAMKAAGARVIVTEIDPICALQA-LMEGYQV-LT------LEDVVSEADI  312 (477)
T ss_pred             HHHHHHhcCCccCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhHHH-HhcCCee-cc------HHHHHhhCCE
Confidence            55555553 33679999999999999999999999999999999888776555 4567653 21      1222346899


Q ss_pred             EEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++++.|+... ....++.+++++.++.+|..
T Consensus       313 VI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~  343 (477)
T PLN02494        313 FVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF  343 (477)
T ss_pred             EEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence            9999998764 48899999999999999874

>TIGR00936 ahcY adenosylhomocysteinase

Probab=98.44  E-value=2.8e-06  Score=78.99  Aligned_cols=102  Identities=18%  Similarity=0.228  Sum_probs=79.3

Q ss_pred             hHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199          168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       168 a~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d  246 (344)
                      ++.++.+. +....|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|+. +.+   .   .+...+.|
T Consensus       181 ~~~~i~r~t~~~l~Gk~VvViG~G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A-~~~G~~-v~~---l---eeal~~aD  252 (406)
T TIGR00936       181 TIDGILRATNLLIAGKTVVVAGYGWCGKGIAMRARGMGARVIVTEVDPIRALEA-AMDGFR-VMT---M---EEAAKIGD  252 (406)
T ss_pred             HHHHHHHhcCCCCCcCEEEEECCCHHHHHHHHHHhhCcCEEEEEeCChhhHHHH-HhcCCE-eCC---H---HHHHhcCC
Confidence            35555554 334789999999999999999999999999999999888877666 456763 221   1   12235689


Q ss_pred             EEEECCCCchhHHH-HHHhcccCCEEEEEcCC
Q 019199          247 FIIDTASGDHPFDA-YMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g~~~~~~~-~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++|+...+.. .+..+++++.++.+|..
T Consensus       253 VVItaTG~~~vI~~~~~~~mK~GailiN~G~~  284 (406)
T TIGR00936       253 IFITATGNKDVIRGEHFENMKDGAIVANIGHF  284 (406)
T ss_pred             EEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence            99999998886764 88999999999998864

This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704).

>TIGR00518 alaDH alanine dehydrogenase

Probab=98.35  E-value=5.5e-06  Score=76.91  Aligned_cols=98  Identities=19%  Similarity=0.248  Sum_probs=75.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC---C--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS---G--  254 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g---~--  254 (344)
                      ++.+|+|+|+|.+|+.+++.++.+|++|++++++.++++.+.+.++........+.+.+.+...++|++|++++   .  
T Consensus       166 ~~~~VlViGaG~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~~aDvVI~a~~~~g~~~  245 (370)
T TIGR00518       166 EPGDVTIIGGGVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVKRADLLIGAVLIPGAKA  245 (370)
T ss_pred             CCceEEEEcCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHccCCEEEEccccCCCCC
Confidence            34568999999999999999999999999999998888777566775433334444555555578999999973   2  


Q ss_pred             ch-hHHHHHHhcccCCEEEEEcCC
Q 019199          255 DH-PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       255 ~~-~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +. .....++.+++++.+++++..
T Consensus       246 p~lit~~~l~~mk~g~vIvDva~d  269 (370)
T TIGR00518       246 PKLVSNSLVAQMKPGAVIVDVAID  269 (370)
T ss_pred             CcCcCHHHHhcCCCCCEEEEEecC
Confidence            21 147788889999999998855

The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP.

>TIGR01035 hemA glutamyl-tRNA reductase

Probab=98.29  E-value=2.1e-07  Score=87.79  Aligned_cols=185  Identities=17%  Similarity=0.220  Sum_probs=114.2

Q ss_pred             CCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc
Q 019199           65 LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER  144 (344)
Q Consensus        65 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  144 (344)
                      ..-|.|+++.+.+++++.++.-+|+.=+       ||.|.+|    ...|......       |...++.|++++.++. 
T Consensus        88 ~~~~~~a~~hl~~Va~GldS~V~GE~qI-------~gQvk~a----~~~a~~~~~~-------g~~l~~lf~~a~~~~k-  148 (417)
T TIGR01035        88 ILTGESAVEHLFRVASGLDSMVVGETQI-------LGQVKNA----YKVAQEEKTV-------GKVLERLFQKAFSVGK-  148 (417)
T ss_pred             hcCchHHHHHHHHHHhhhhhhhcCChHH-------HHHHHHH----HHHHHHcCCc-------hHHHHHHHHHHHHHhh-
Confidence            3579999999999999988866666542       6677666    3333332111       3345678998887765 


Q ss_pred             eEEE---c-CCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199          145 YCYK---I-ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE  219 (344)
Q Consensus       145 ~~~~---~-P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~  219 (344)
                      .+..   + +..++...+|        .-.+....+. .++++|+|+|+|.+|..+++.++..|+ +|+++.++.++...
T Consensus       149 ~vr~~t~i~~~~vSv~~~A--------v~la~~~~~~-l~~~~VlViGaG~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~  219 (417)
T TIGR01035       149 RVRTETDISAGAVSISSAA--------VELAERIFGS-LKGKKALLIGAGEMGELVAKHLLRKGVGKILIANRTYERAED  219 (417)
T ss_pred             hhhhhcCCCCCCcCHHHHH--------HHHHHHHhCC-ccCCEEEEECChHHHHHHHHHHHHCCCCEEEEEeCCHHHHHH
Confidence            2222   3 2223222221        1111222223 678999999999999999999999995 89999999888765


Q ss_pred             HHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH--HHHHHh-ccc--C-CEEEEEcCCCccc
Q 019199          220 ALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF--DAYMSL-LKV--A-GVYVLVGFPSKVK  281 (344)
Q Consensus       220 ~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~--~~~~~~-l~~--~-G~iv~~g~~~~~~  281 (344)
                      +.+.+|... +..   +...+...++|+||++++.+..+  ...++. ++.  . -.+++++.+.+.+
T Consensus       220 la~~~g~~~-i~~---~~l~~~l~~aDvVi~aT~s~~~ii~~e~l~~~~~~~~~~~~viDla~Prdid  283 (417)
T TIGR01035       220 LAKELGGEA-VKF---EDLEEYLAEADIVISSTGAPHPIVSKEDVERALRERTRPLFIIDIAVPRDVD  283 (417)
T ss_pred             HHHHcCCeE-eeH---HHHHHHHhhCCEEEECCCCCCceEcHHHHHHHHhcCCCCeEEEEeCCCCCCC
Confidence            656777642 322   22333345799999999865422  122222 221  1 2566777664443

This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA.

>COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only]

Probab=98.27  E-value=5.1e-05  Score=64.78  Aligned_cols=113  Identities=16%  Similarity=0.225  Sum_probs=81.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC----cEEEeCCCHHHHHH----h---cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA----DKFVVSSDLEQMKA----L---GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~~v~~~~~~~~~~----~---~~~~dv  247 (344)
                      .++.++|.|| +++|.+.++.+...|++|+.+.|+.++++++..+++.    -..+|-.+.+.+..    +   -+.+|+
T Consensus         5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi   84 (246)
T COG4221           5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI   84 (246)
T ss_pred             CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence            4577899998 8999999999999999999999999999999888983    33456666544322    2   267999


Q ss_pred             EEECCCCch----------hHHHHHH---------------hc--ccCCEEEEEcCC-CccccCCceeeeech
Q 019199          248 IIDTASGDH----------PFDAYMS---------------LL--KVAGVYVLVGFP-SKVKFSPASLNIGGT  292 (344)
Q Consensus       248 vid~~g~~~----------~~~~~~~---------------~l--~~~G~iv~~g~~-~~~~~~~~~~~~~~~  292 (344)
                      .+++.|...          -|+.+++               .+  +..|+|+.+|.. +...++....+-.++
T Consensus        85 LvNNAGl~~g~~~~~~~~~dw~~Mid~Ni~G~l~~~~avLP~m~~r~~G~IiN~~SiAG~~~y~~~~vY~ATK  157 (246)
T COG4221          85 LVNNAGLALGDPLDEADLDDWDRMIDTNVKGLLNGTRAVLPGMVERKSGHIINLGSIAGRYPYPGGAVYGATK  157 (246)
T ss_pred             EEecCCCCcCChhhhCCHHHHHHHHHHHHHHHHHHHHHhhhHHHhcCCceEEEeccccccccCCCCccchhhH
Confidence            999998531          1222221               12  446899999887 666677666664433

>cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase

Probab=98.20  E-value=1.7e-05  Score=72.03  Aligned_cols=109  Identities=21%  Similarity=0.226  Sum_probs=78.0

Q ss_pred             ceEEEcCCCCCcccccccchhhhHhHHHHHhccCC---CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199          144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN---QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE  219 (344)
Q Consensus       144 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~---~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~  219 (344)
                      ...+++|+.+..+.++... +...++.++..+...   -++.+|+|+|+|.+|..+++.++..|+ +|++++++.++...
T Consensus       139 ~~a~~~~k~vr~et~i~~~-~~sv~~~Av~~a~~~~~~l~~~~V~ViGaG~iG~~~a~~L~~~g~~~V~v~~r~~~ra~~  217 (311)
T cd05213         139 QKAIKVGKRVRTETGISRG-AVSISSAAVELAEKIFGNLKGKKVLVIGAGEMGELAAKHLAAKGVAEITIANRTYERAEE  217 (311)
T ss_pred             HHHHHHHHHHhhhcCCCCC-CcCHHHHHHHHHHHHhCCccCCEEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHH
Confidence            3567788888888776433 344445555444431   478999999999999999999998876 88999999888766


Q ss_pred             HHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          220 ALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       220 ~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      +.+++|.. +++.   +.+.+....+|+||.+++.+..
T Consensus       218 la~~~g~~-~~~~---~~~~~~l~~aDvVi~at~~~~~  251 (311)
T cd05213         218 LAKELGGN-AVPL---DELLELLNEADVVISATGAPHY  251 (311)
T ss_pred             HHHHcCCe-EEeH---HHHHHHHhcCCEEEECCCCCch
Confidence            66788874 3332   2223333568999999998874

Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate,

>PTZ00075 Adenosylhomocysteinase; Provisional

Probab=98.15  E-value=2.7e-05  Score=73.35  Aligned_cols=123  Identities=15%  Similarity=0.196  Sum_probs=86.1

Q ss_pred             EEEcCCCCCccccc-ccchhhhHhHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh
Q 019199          146 CYKIANDYPLALAA-PLLCAGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL  223 (344)
Q Consensus       146 ~~~~P~~~~~~~aa-~l~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~  223 (344)
                      ++.+|+...-..+- .+.+...+ +.++.+. +..-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ..
T Consensus       218 V~nv~d~~tk~~aD~~~G~~~s~-~d~~~R~~~~~LaGKtVgVIG~G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A-~~  295 (476)
T PTZ00075        218 AINVNDSVTKSKFDNIYGCRHSL-IDGIFRATDVMIAGKTVVVCGYGDVGKGCAQALRGFGARVVVTEIDPICALQA-AM  295 (476)
T ss_pred             EEEeCCcchHHHHHHHHHHHHHH-HHHHHHhcCCCcCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhHHHH-Hh
Confidence            55556654433332 23332222 3444333 344689999999999999999999999999999998877766555 34


Q ss_pred             CCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199          224 LGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       224 ~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~~  277 (344)
                      .|+..+    .   +.+....+|+++.+.|+...+. ..++.+++++.++.+|..
T Consensus       296 ~G~~~~----~---leell~~ADIVI~atGt~~iI~~e~~~~MKpGAiLINvGr~  343 (476)
T PTZ00075        296 EGYQVV----T---LEDVVETADIFVTATGNKDIITLEHMRRMKNNAIVGNIGHF  343 (476)
T ss_pred             cCceec----c---HHHHHhcCCEEEECCCcccccCHHHHhccCCCcEEEEcCCC
Confidence            565422    1   2233467999999999877564 899999999999999865

>TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit

Probab=98.12  E-value=8.5e-05  Score=66.52  Aligned_cols=94  Identities=19%  Similarity=0.194  Sum_probs=72.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|++++|+|.|.+|.+++..++.+|++|++..++.++.+.+ .++|... +.   .+.+.+...++|+++++++....-
T Consensus       149 l~gk~v~IiG~G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~-~~~g~~~-~~---~~~l~~~l~~aDiVint~P~~ii~  223 (287)
T TIGR02853       149 IHGSNVMVLGFGRTGMTIARTFSALGARVFVGARSSADLARI-TEMGLIP-FP---LNKLEEKVAEIDIVINTIPALVLT  223 (287)
T ss_pred             CCCCEEEEEcChHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCee-ec---HHHHHHHhccCCEEEECCChHHhC
Confidence            358899999999999999999999999999999998877666 4666542 22   223344446799999998755323


Q ss_pred             HHHHHhcccCCEEEEEcCC
Q 019199          259 DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...++.++++..+++++..
T Consensus       224 ~~~l~~~k~~aliIDlas~  242 (287)
T TIGR02853       224 ADVLSKLPKHAVIIDLASK  242 (287)
T ss_pred             HHHHhcCCCCeEEEEeCcC
Confidence            5677888999889988765

This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA.

>PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed

Probab=98.06  E-value=4.7e-05  Score=66.93  Aligned_cols=130  Identities=17%  Similarity=0.204  Sum_probs=81.8

Q ss_pred             ceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          135 YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       135 ~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      |.++.. +...++++++++++..+. .+.+.. ....+...  ..++++||.+|+|. |..++.+++ .|+ +|++++.+
T Consensus        79 ~~~~~~-~~~~~i~i~p~~afgtg~-h~tt~~-~l~~l~~~--~~~~~~VLDiGcGs-G~l~i~~~~-~g~~~v~giDis  151 (250)
T PRK00517         79 WEDPPD-PDEINIELDPGMAFGTGT-HPTTRL-CLEALEKL--VLPGKTVLDVGCGS-GILAIAAAK-LGAKKVLAVDID  151 (250)
T ss_pred             CcCCCC-CCeEEEEECCCCccCCCC-CHHHHH-HHHHHHhh--cCCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEEECC
Confidence            444433 667789999998887765 221111 22233322  36889999999986 877776555 576 69999999


Q ss_pred             chhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCCCc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          214 TSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTASGD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       214 ~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +...+.+++..   +....+.....      ...+|+|+.+....   ..++.+.+.|+++|+++..|..
T Consensus       152 ~~~l~~A~~n~~~~~~~~~~~~~~~------~~~fD~Vvani~~~~~~~l~~~~~~~LkpgG~lilsgi~  215 (250)
T PRK00517        152 PQAVEAARENAELNGVELNVYLPQG------DLKADVIVANILANPLLELAPDLARLLKPGGRLILSGIL  215 (250)
T ss_pred             HHHHHHHHHHHHHcCCCceEEEccC------CCCcCEEEEcCcHHHHHHHHHHHHHhcCCCcEEEEEECc
Confidence            88777664332   22111111000      01599998765433   2356788889999999988754

>PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases

Probab=97.96  E-value=2.1e-05  Score=62.22  Aligned_cols=100  Identities=19%  Similarity=0.309  Sum_probs=67.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      -.+.+++|+|+|+.|.+++..+...|+ +|+++.|+.++.+.+.+.++..  ..+...+..   +...++|++|++++.+
T Consensus        10 l~~~~vlviGaGg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~~~---~~~~~~DivI~aT~~~   86 (135)
T PF01488_consen   10 LKGKRVLVIGAGGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLEDLE---EALQEADIVINATPSG   86 (135)
T ss_dssp             GTTSEEEEESSSHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGGHC---HHHHTESEEEE-SSTT
T ss_pred             cCCCEEEEECCHHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHHHH---HHHhhCCeEEEecCCC
Confidence            468999999999999999999999999 5999999999988887777532  344444332   2235699999998865


Q ss_pred             hh--HHHHHHhccc-CCEEEEEcCCCccc
Q 019199          256 HP--FDAYMSLLKV-AGVYVLVGFPSKVK  281 (344)
Q Consensus       256 ~~--~~~~~~~l~~-~G~iv~~g~~~~~~  281 (344)
                      ..  ....+....+ -+.+++++.+.+..
T Consensus        87 ~~~i~~~~~~~~~~~~~~v~Dla~Pr~i~  115 (135)
T PF01488_consen   87 MPIITEEMLKKASKKLRLVIDLAVPRDID  115 (135)
T ss_dssp             STSSTHHHHTTTCHHCSEEEES-SS-SB-
T ss_pred             CcccCHHHHHHHHhhhhceeccccCCCCC
Confidence            31  2233333322 25777887664433

Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C ....

>PRK08324 short chain dehydrogenase; Validated

Probab=97.91  E-value=0.00012  Score=73.76  Aligned_cols=132  Identities=21%  Similarity=0.236  Sum_probs=87.7

Q ss_pred             CcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc--cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEE
Q 019199          133 GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTV  209 (344)
Q Consensus       133 g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~  209 (344)
                      .++++|..+++..++.+ +..+.+++.            +.+.  .....|+++||+|+ |++|.++++.+...|++|++
T Consensus       385 ~~~~~~~~l~~~~~f~i-~~~~~e~a~------------l~~~~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl  451 (681)
T PRK08324        385 EAVGRYEPLSEQEAFDI-EYWSLEQAK------------LQRMPKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL  451 (681)
T ss_pred             hhcCCccCCChhhhcce-eeehhhhhh------------hhcCCCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence            34567777777666666 555555553            1111  11146789999997 99999999999999999999


Q ss_pred             EeCCchhHHHHHHhCCC-----cEEEeCCCHHHHHHh-------cCCccEEEECCCCc----------------------
Q 019199          210 LSTSTSKKEEALSLLGA-----DKFVVSSDLEQMKAL-------GKSLDFIIDTASGD----------------------  255 (344)
Q Consensus       210 ~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~~~-------~~~~dvvid~~g~~----------------------  255 (344)
                      ++++.++.+.+.+.++.     ....|..+.+.+.+.       .+++|++|++.|..                      
T Consensus       452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~  531 (681)
T PRK08324        452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT  531 (681)
T ss_pred             EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence            99998887666555543     122355555443322       25799999999821                      


Q ss_pred             ---hhHHHHHHhccc---CCEEEEEcCC
Q 019199          256 ---HPFDAYMSLLKV---AGVYVLVGFP  277 (344)
Q Consensus       256 ---~~~~~~~~~l~~---~G~iv~~g~~  277 (344)
                         ..++.+++.+++   +|+++.++..
T Consensus       532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~  559 (681)
T PRK08324        532 GHFLVAREAVRIMKAQGLGGSIVFIASK  559 (681)
T ss_pred             HHHHHHHHHHHHHHhcCCCcEEEEECCc
Confidence               123344555555   6899998765

>PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional

Probab=97.73  E-value=3.8e-05  Score=75.72  Aligned_cols=96  Identities=20%  Similarity=0.186  Sum_probs=65.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC---------------------chhHHHHHHhCCCcEEEeCCC-H
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS---------------------TSKKEEALSLLGADKFVVSSD-L  235 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~---------------------~~~~~~~~~~~g~~~~v~~~~-~  235 (344)
                      .+.|++|+|+|+|+.|+++++.++..|++|++++..                     +.+++.+ +++|++..++... .
T Consensus       134 ~~~g~~V~VIGaGpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~-~~~Gv~~~~~~~~~~  212 (564)
T PRK12771        134 PDTGKRVAVIGGGPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRI-LDLGVEVRLGVRVGE  212 (564)
T ss_pred             CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHH-HHCCCEEEeCCEECC
Confidence            478999999999999999999999999999998853                     2345566 5789876665432 1


Q ss_pred             H-HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          236 E-QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       236 ~-~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      + .......++|+||+++|........+......|.+..+
T Consensus       213 ~~~~~~~~~~~D~Vi~AtG~~~~~~~~i~g~~~~gv~~~~  252 (564)
T PRK12771        213 DITLEQLEGEFDAVFVAIGAQLGKRLPIPGEDAAGVLDAV  252 (564)
T ss_pred             cCCHHHHHhhCCEEEEeeCCCCCCcCCCCCCccCCcEEHH
Confidence            1 11223356999999999765333333344444544433

>COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones]

Probab=97.64  E-value=0.00048  Score=57.77  Aligned_cols=100  Identities=27%  Similarity=0.285  Sum_probs=70.2

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCcEE-EeCCCHHHHHH-hcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKF-VVSSDLEQMKA-LGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~~~-v~~~~~~~~~~-~~~~~d  246 (344)
                      |.+...+++|++||=+|+| .|+.++-+++..+ +|+.+.+.++=.+.+   .+.+|-..+ +...|- .... ....||
T Consensus        64 m~~~L~~~~g~~VLEIGtG-sGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gDG-~~G~~~~aPyD  140 (209)
T COG2518          64 MLQLLELKPGDRVLEIGTG-SGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGDG-SKGWPEEAPYD  140 (209)
T ss_pred             HHHHhCCCCCCeEEEECCC-chHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECCc-ccCCCCCCCcC
Confidence            3345556999999999987 4999999999888 899999887733333   356775322 222221 1000 115699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      .++-+.+.+..-+.+++.|+++|+++.-
T Consensus       141 ~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P  168 (209)
T COG2518         141 RIIVTAAAPEVPEALLDQLKPGGRLVIP  168 (209)
T ss_pred             EEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence            9998888777578999999999999754

>PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related

Probab=97.60  E-value=0.00035  Score=58.07  Aligned_cols=121  Identities=24%  Similarity=0.291  Sum_probs=82.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-c--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-D--  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~--  255 (344)
                      -.|.+|.|+|.|.+|+..+++++.+|++|++.++........ ...+.    ...+.+   ++-...|+++.+... +  
T Consensus        34 l~g~tvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~-~~~~~----~~~~l~---ell~~aDiv~~~~plt~~T  105 (178)
T PF02826_consen   34 LRGKTVGIIGYGRIGRAVARRLKAFGMRVIGYDRSPKPEEGA-DEFGV----EYVSLD---ELLAQADIVSLHLPLTPET  105 (178)
T ss_dssp             STTSEEEEESTSHHHHHHHHHHHHTT-EEEEEESSCHHHHHH-HHTTE----EESSHH---HHHHH-SEEEE-SSSSTTT
T ss_pred             cCCCEEEEEEEcCCcCeEeeeeecCCceeEEecccCChhhhc-ccccc----eeeehh---hhcchhhhhhhhhcccccc
Confidence            568999999999999999999999999999999998866534 35553    222322   222348999887762 2  


Q ss_pred             --hhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeCccHH
Q 019199          256 --HPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPIENVN  320 (344)
Q Consensus       256 --~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~~~  320 (344)
                        ..-...++.++++..+|.++-..-+             +-+.+++.+++|++.-. .++|.-|..+
T Consensus       106 ~~li~~~~l~~mk~ga~lvN~aRG~~v-------------de~aL~~aL~~g~i~ga~lDV~~~EP~~  160 (178)
T PF02826_consen  106 RGLINAEFLAKMKPGAVLVNVARGELV-------------DEDALLDALESGKIAGAALDVFEPEPLP  160 (178)
T ss_dssp             TTSBSHHHHHTSTTTEEEEESSSGGGB--------------HHHHHHHHHTTSEEEEEESS-SSSSSS
T ss_pred             ceeeeeeeeeccccceEEEeccchhhh-------------hhhHHHHHHhhccCceEEEECCCCCCCC
Confidence              1245778899999999888633221             35688999999999753 3666555443

All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A ....

>PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional

Probab=97.59  E-value=0.001  Score=64.51  Aligned_cols=103  Identities=15%  Similarity=0.113  Sum_probs=70.8

Q ss_pred             ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--------CC------c-EEEeCCCHHHH
Q 019199          175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--------GA------D-KFVVSSDLEQM  238 (344)
Q Consensus       175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~------~-~~v~~~~~~~~  238 (344)
                      ....+.|.++||+|+ |.+|..+++.+...|++|++++++.++...+.+.+        |.      . ...|..+.+.+
T Consensus        74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~esI  153 (576)
T PLN03209         74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKPDQI  153 (576)
T ss_pred             ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCHHHH
Confidence            333478899999998 99999999999889999999999988765543221        21      1 12355566666


Q ss_pred             HHhcCCccEEEECCCCch---------------hHHHHHHhccc--CCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDH---------------PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~---------------~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                      .+..+++|++|.+.|...               ....+++.+..  .++||.++..
T Consensus       154 ~~aLggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSi  209 (576)
T PLN03209        154 GPALGNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSL  209 (576)
T ss_pred             HHHhcCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccc
Confidence            655578999999987531               12334444433  3689988765

>PRK12742 oxidoreductase; Provisional

Probab=97.58  E-value=0.0024  Score=55.30  Aligned_cols=98  Identities=21%  Similarity=0.208  Sum_probs=65.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcEE-EeCCCHHHHHHh---cCCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKF-VVSSDLEQMKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~---~~~~dvvid~~g  253 (344)
                      .+.++||+|+ |++|.++++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+.+.+.+.   .+++|+++++.|
T Consensus         5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~ag   84 (237)
T PRK12742          5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKSGALDILVVNAG   84 (237)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHhCCCcEEEECCC
Confidence            4678999998 99999999999999999887765 44555555455565432 344454433332   256999999887


Q ss_pred             Cch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          254 GDH-------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~~~-------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...                         ....++..++..|+++.++..
T Consensus        85 ~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  133 (237)
T PRK12742         85 IAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSV  133 (237)
T ss_pred             CCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecc
Confidence            421                         012334445667899988765

>PRK00045 hemA glutamyl-tRNA reductase; Reviewed

Probab=97.56  E-value=0.00048  Score=65.38  Aligned_cols=161  Identities=18%  Similarity=0.200  Sum_probs=98.8

Q ss_pred             CCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc
Q 019199           65 LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER  144 (344)
Q Consensus        65 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  144 (344)
                      ..-|||+++.+.+++++.++.-+|+.=+          |++|.+.+ ..|.....       -|...++.|++.+.++  
T Consensus        90 ~~~g~ea~~hl~~V~~GldS~V~GE~qI----------lgQvk~a~-~~a~~~g~-------~g~~l~~lf~~a~~~~--  149 (423)
T PRK00045         90 VHEGEEAVRHLFRVASGLDSMVLGEPQI----------LGQVKDAY-ALAQEAGT-------VGTILNRLFQKAFSVA--  149 (423)
T ss_pred             hcCCHHHHHHHHHHHhhhhhhhcCChHH----------HHHHHHHH-HHHHHcCC-------chHHHHHHHHHHHHHH--
Confidence            3469999999999999988876776542          33333221 11211100       0223345565554333  


Q ss_pred             eEEEcCCCCCcccccccchhhhHhHHHHHhccC---CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH
Q 019199          145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKM---NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA  220 (344)
Q Consensus       145 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~  220 (344)
                            +.+....+. ...+...++.++..+..   -.++.+|+|+|+|.+|.++++.++..|+ +|+++.++.++...+
T Consensus       150 ------k~v~~~t~i-~~~~~Sv~~~Av~~a~~~~~~~~~~~vlViGaG~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~l  222 (423)
T PRK00045        150 ------KRVRTETGI-GAGAVSVASAAVELAKQIFGDLSGKKVLVIGAGEMGELVAKHLAEKGVRKITVANRTLERAEEL  222 (423)
T ss_pred             ------hhHhhhcCC-CCCCcCHHHHHHHHHHHhhCCccCCEEEEECchHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHH
Confidence                  333222221 11122333444443332   1578999999999999999999999998 899999998887766


Q ss_pred             HHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          221 LSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       221 ~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      .+++|.+ +++.   +...+...++|+||++++.+.
T Consensus       223 a~~~g~~-~~~~---~~~~~~l~~aDvVI~aT~s~~  254 (423)
T PRK00045        223 AEEFGGE-AIPL---DELPEALAEADIVISSTGAPH  254 (423)
T ss_pred             HHHcCCc-EeeH---HHHHHHhccCCEEEECCCCCC
Confidence            5778864 3332   222333367999999998754

>COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism]

Probab=97.54  E-value=0.0008  Score=62.15  Aligned_cols=96  Identities=25%  Similarity=0.292  Sum_probs=74.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC---CcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      .++||+|+|.+|+.+++.+...+ .+|++.+++.++++.+....+   -...+|-.+.+.+.++..++|+||++.+....
T Consensus         2 ~~ilviGaG~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~~~~~~~v~~~~vD~~d~~al~~li~~~d~VIn~~p~~~~   81 (389)
T COG1748           2 MKILVIGAGGVGSVVAHKLAQNGDGEVTIADRSKEKCARIAELIGGKVEALQVDAADVDALVALIKDFDLVINAAPPFVD   81 (389)
T ss_pred             CcEEEECCchhHHHHHHHHHhCCCceEEEEeCCHHHHHHHHhhccccceeEEecccChHHHHHHHhcCCEEEEeCCchhh
Confidence            46899999999999999988888 599999999999888844432   24567777777777777778999999998875


Q ss_pred             HHHHHHhcccCCEEEEEcCC
Q 019199          258 FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.-+-.|++.+=.++++...
T Consensus        82 ~~i~ka~i~~gv~yvDts~~  101 (389)
T COG1748          82 LTILKACIKTGVDYVDTSYY  101 (389)
T ss_pred             HHHHHHHHHhCCCEEEcccC
Confidence            65555666777667666544

>PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional

Probab=97.54  E-value=0.0019  Score=54.58  Aligned_cols=117  Identities=15%  Similarity=0.141  Sum_probs=77.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HhCC-Cc--EEEeCCCHHHHHHhcCCccEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEAL---SLLG-AD--KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~---~~~g-~~--~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      .+.++++|+.+|+|+ |..++.+++..+  .+|+.++.+++..+.++   +.+| .+  .++..+..+.+......+|.|
T Consensus        37 ~~~~~~~vlDlG~Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~~d~~~~l~~~~~~~D~V  115 (198)
T PRK00377         37 RLRKGDMILDIGCGT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIKGEAPEILFTINEKFDRI  115 (198)
T ss_pred             CCCCcCEEEEeCCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEEechhhhHhhcCCCCCEE
Confidence            348999999999987 888888888764  48999999988776553   2355 22  222222233344444679999


Q ss_pred             EECCCC---chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          249 IDTASG---DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       249 id~~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                      |...+.   ...+..+.+.|+|+|+++..-.              ..+.+.++.+.+.+..+.
T Consensus       116 ~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~~--------------~~~~~~~~~~~l~~~g~~  164 (198)
T PRK00377        116 FIGGGSEKLKEIISASWEIIKKGGRIVIDAI--------------LLETVNNALSALENIGFN  164 (198)
T ss_pred             EECCCcccHHHHHHHHHHHcCCCcEEEEEee--------------cHHHHHHHHHHHHHcCCC
Confidence            985543   2347778889999999985421              112356777777655553

>PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A

Probab=97.54  E-value=0.00061  Score=51.65  Aligned_cols=94  Identities=22%  Similarity=0.245  Sum_probs=65.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHhC---C--CcEEEeCCCHHHHHHhcCCccEEEECC-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLL---G--ADKFVVSSDLEQMKALGKSLDFIIDTA-  252 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~-~~g~~V~~~~~~~~~~~~~~~~~---g--~~~~v~~~~~~~~~~~~~~~dvvid~~-  252 (344)
                      ||.+||-+|+|. |..++.+++ ..+++|++++.+++..+.+++..   +  ....+...+.........+||+|+... 
T Consensus         1 p~~~vLDlGcG~-G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~d~~~~~~~~~~~D~v~~~~~   79 (112)
T PF12847_consen    1 PGGRVLDLGCGT-GRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQGDAEFDPDFLEPFDLVICSGF   79 (112)
T ss_dssp             TTCEEEEETTTT-SHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEESCCHGGTTTSSCEEEEEECSG
T ss_pred             CCCEEEEEcCcC-CHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEECccccCcccCCCCCEEEECCC
Confidence            688999999874 778888888 47889999999999887776655   2  222222222211222346799999866 


Q ss_pred             CC---ch------hHHHHHHhcccCCEEEEE
Q 019199          253 SG---DH------PFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       253 g~---~~------~~~~~~~~l~~~G~iv~~  274 (344)
                      ..   ..      .++.+.+.|+|+|+++..
T Consensus        80 ~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~  110 (112)
T PF12847_consen   80 TLHFLLPLDERRRVLERIRRLLKPGGRLVIN  110 (112)
T ss_dssp             SGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence            21   11      267888999999999864

...

>COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism]

Probab=97.50  E-value=0.00071  Score=59.62  Aligned_cols=96  Identities=21%  Similarity=0.233  Sum_probs=78.2

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-----c
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-----D  255 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-----~  255 (344)
                      ..+|.|+|.|.+|.-++.+|..+|++|++.+.+.+|++.+...|+.....-++.+..+++.-.++|++|.++=-     |
T Consensus       168 ~~kv~iiGGGvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~~st~~~iee~v~~aDlvIgaVLIpgakaP  247 (371)
T COG0686         168 PAKVVVLGGGVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTLYSTPSNIEEAVKKADLVIGAVLIPGAKAP  247 (371)
T ss_pred             CccEEEECCccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEEEcCHHHHHHHhhhccEEEEEEEecCCCCc
Confidence            34577789999999999999999999999999999999997777766555567777777777789999886521     1


Q ss_pred             -hhHHHHHHhcccCCEEEEEcC
Q 019199          256 -HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       256 -~~~~~~~~~l~~~G~iv~~g~  276 (344)
                       ...++.++.|+|++.++++..
T Consensus       248 kLvt~e~vk~MkpGsVivDVAi  269 (371)
T COG0686         248 KLVTREMVKQMKPGSVIVDVAI  269 (371)
T ss_pred             eehhHHHHHhcCCCcEEEEEEE
Confidence             237788999999999998863

>COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism]

Probab=97.48  E-value=0.0027  Score=52.24  Aligned_cols=114  Identities=23%  Similarity=0.235  Sum_probs=78.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHH---HHhCCCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEA---LSLLGAD--KFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~---~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      +++|+.++-+|+|+ |...++++... ..+|+++++++++.+..   .++||.+  .++..+.++.+.... .+|.+|--
T Consensus        32 ~~~g~~l~DIGaGt-Gsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~Ap~~L~~~~-~~daiFIG  109 (187)
T COG2242          32 PRPGDRLWDIGAGT-GSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDAPEALPDLP-SPDAIFIG  109 (187)
T ss_pred             CCCCCEEEEeCCCc-cHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccchHhhcCCC-CCCEEEEC
Confidence            48999888889863 66777888443 34999999998865443   3567865  555666676666544 69999865


Q ss_pred             CCC--chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          252 ASG--DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       252 ~g~--~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                      -|.  +..++.+|..|+++|++|.-..+              .+....+++++++--+
T Consensus       110 Gg~~i~~ile~~~~~l~~ggrlV~nait--------------lE~~~~a~~~~~~~g~  153 (187)
T COG2242         110 GGGNIEEILEAAWERLKPGGRLVANAIT--------------LETLAKALEALEQLGG  153 (187)
T ss_pred             CCCCHHHHHHHHHHHcCcCCeEEEEeec--------------HHHHHHHHHHHHHcCC
Confidence            543  23478889999999999876322              2334566666665544

>PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3

Probab=97.41  E-value=0.0051  Score=49.64  Aligned_cols=101  Identities=18%  Similarity=0.259  Sum_probs=68.4

Q ss_pred             HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+. ...-.|.+++|.|-|-+|...++.++.+|++|++++.++-+.-++ ..-|.+..       .+.+.....|+
T Consensus        10 ~d~i~r~t~~~l~Gk~vvV~GYG~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA-~~dGf~v~-------~~~~a~~~adi   81 (162)
T PF00670_consen   10 VDGIMRATNLMLAGKRVVVIGYGKVGKGIARALRGLGARVTVTEIDPIRALQA-AMDGFEVM-------TLEEALRDADI   81 (162)
T ss_dssp             HHHHHHHH-S--TTSEEEEE--SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHH-HHTT-EEE--------HHHHTTT-SE
T ss_pred             HHHHHhcCceeeCCCEEEEeCCCcccHHHHHHHhhCCCEEEEEECChHHHHHh-hhcCcEec-------CHHHHHhhCCE
Confidence            4444433 445689999999999999999999999999999999999877666 35565432       23444567999


Q ss_pred             EEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++.++|.... -.+-++.|+++..+..+|..
T Consensus        82 ~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~  112 (162)
T PF00670_consen   82 FVTATGNKDVITGEHFRQMKDGAILANAGHF  112 (162)
T ss_dssp             EEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred             EEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence            9999998653 45778899999888888755

3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C ....

>PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function

Probab=97.40  E-value=0.01  Score=53.18  Aligned_cols=147  Identities=19%  Similarity=0.107  Sum_probs=89.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHH-HCC-CeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGK-AFG-LNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~-~~g-~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      .+.|+|.+| +-.++.++..++ ..+ .+++.+++..++.  ..+.+|+ +.++.+++.+.+..  ..--+++|..|+..
T Consensus       136 a~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~~--Fve~lg~Yd~V~~Yd~i~~l~~--~~~~v~VDfaG~~~  211 (314)
T PF11017_consen  136 AAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNVA--FVESLGCYDEVLTYDDIDSLDA--PQPVVIVDFAGNGE  211 (314)
T ss_pred             ccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcchh--hhhccCCceEEeehhhhhhccC--CCCEEEEECCCCHH
Confidence            355666777 777777777777 344 4888888766644  4578895 88888876554322  44567889999988


Q ss_pred             hHHHHHHhcccCC-EEEEEcCC--Cc----cccCCce-e--e-----------eechHhHHH---HHHHHHhCCCcc--c
Q 019199          257 PFDAYMSLLKVAG-VYVLVGFP--SK----VKFSPAS-L--N-----------IGGTKDTQE---MLEYCAAHKIYP--Q  310 (344)
Q Consensus       257 ~~~~~~~~l~~~G-~iv~~g~~--~~----~~~~~~~-~--~-----------~~~~~~~~~---~~~~~~~g~~~~--~  310 (344)
                      ....+...+...- ..+.+|.+  ..    ..++... .  +           ++..+..++   ...-+.+.....  .
T Consensus       212 ~~~~Lh~~l~d~l~~~~~VG~th~~~~~~~~~l~g~~~~~FFAp~~~~kr~~~~G~~~~~~r~~~aw~~f~~~~~~wl~~  291 (314)
T PF11017_consen  212 VLAALHEHLGDNLVYSCLVGATHWDKVEAPADLPGPRPEFFFAPDQIDKRIKEWGAAEFFQRMAAAWKRFAADAQPWLKV  291 (314)
T ss_pred             HHHHHHHHHhhhhhEEEEEEccCccccCccccCCCCCcEEEeChHHHHHHHHHhCHHHHHHHHHHHHHHHHHhhcCcEEE
Confidence            7888888887753 45677765  11    1121111 1  1           111111121   222222222222  2


Q ss_pred             eEEEeCccHHHHHHHHHcCCc
Q 019199          311 IETIPIENVNEALERLIKRDV  331 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~  331 (344)
                      .++.+.+.+.++++++++++.
T Consensus       292 ~~~~G~ea~~~~y~~l~~G~v  312 (314)
T PF11017_consen  292 EEVAGPEAVEAAYQDLLAGKV  312 (314)
T ss_pred             EEecCHHHHHHHHHHHhcCCC
Confidence            367799999999999998763

>COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane]

Probab=97.40  E-value=0.00092  Score=55.47  Aligned_cols=74  Identities=19%  Similarity=0.229  Sum_probs=56.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--CcEEEeCCCHHHHHHh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--ADKFVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~~~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      -|.++||.|+ +++|++.++....+|=+||+..|++++++++.....  ...+.|..+.+..+++       -...++++
T Consensus         4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~~~~~~lvewLkk~~P~lNvli   83 (245)
T COG3967           4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADRDSRRELVEWLKKEYPNLNVLI   83 (245)
T ss_pred             cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccchhhHHHHHHHHHhhCCchheee
Confidence            4789999975 899999999999999999999999999999855554  3556666665433332       24678888


Q ss_pred             ECCC
Q 019199          250 DTAS  253 (344)
Q Consensus       250 d~~g  253 (344)
                      ++.|
T Consensus        84 NNAG   87 (245)
T COG3967          84 NNAG   87 (245)
T ss_pred             eccc
Confidence            8776

>TIGR00406 prmA ribosomal protein L11 methyltransferase

Probab=97.40  E-value=0.0021  Score=57.74  Aligned_cols=96  Identities=18%  Similarity=0.222  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC---CCc-EEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL---GAD-KFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .++++||-+|+|+ |..++.+++ .|+ +|++++.++...+.+++..   +.. .+..... +......++||+|+....
T Consensus       158 ~~g~~VLDvGcGs-G~lai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~~~~~~~~~fDlVvan~~  234 (288)
T TIGR00406       158 LKDKNVIDVGCGS-GILSIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-YLEQPIEGKADVIVANIL  234 (288)
T ss_pred             CCCCEEEEeCCCh-hHHHHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-ccccccCCCceEEEEecC
Confidence            6789999999986 777777666 466 8999999988766663322   211 1111110 011112357999987554


Q ss_pred             Cc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          254 GD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..   ..+..+.+.|+|+|+++..|..
T Consensus       235 ~~~l~~ll~~~~~~LkpgG~li~sgi~  261 (288)
T TIGR00406       235 AEVIKELYPQFSRLVKPGGWLILSGIL  261 (288)
T ss_pred             HHHHHHHHHHHHHHcCCCcEEEEEeCc
Confidence            32   2356778899999999988754

Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis.

>PRK05993 short chain dehydrogenase; Provisional

Probab=97.37  E-value=0.0054  Score=54.68  Aligned_cols=73  Identities=18%  Similarity=0.245  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh--------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL--------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~--------~~~~dvvi  249 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++++.+ ...+.+. ..|..+.+.+.+.        .+.+|+++
T Consensus         3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li   81 (277)
T PRK05993          3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAAL-EAEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF   81 (277)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence            4578999998 9999999999888999999999998887766 3445432 2355555433221        25789999


Q ss_pred             ECCC
Q 019199          250 DTAS  253 (344)
Q Consensus       250 d~~g  253 (344)
                      ++.|
T Consensus        82 ~~Ag   85 (277)
T PRK05993         82 NNGA   85 (277)
T ss_pred             ECCC
Confidence            9876

>PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.36  E-value=0.0027  Score=54.99  Aligned_cols=98  Identities=27%  Similarity=0.332  Sum_probs=66.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEE--eCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFV--VSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v--~~~~~~~~~~~-------~~~~d  246 (344)
                      ++++++|+|+ |++|..+++.+...|++|+.+++++++.+.+.+..   +..+.+  |..+.+.+.+.       .+++|
T Consensus         4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   83 (238)
T PRK05786          4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID   83 (238)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4689999998 99999999999999999999999988765552332   221222  33444333221       25689


Q ss_pred             EEEECCCCc-----------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDTASGD-----------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g~~-----------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .++.+.+..                       ..++.++..++++|+++.++..
T Consensus        84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  137 (238)
T PRK05786         84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSM  137 (238)
T ss_pred             EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecc
Confidence            999888742                       1134455566778999988765

>PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B

Probab=97.35  E-value=0.0023  Score=53.11  Aligned_cols=91  Identities=27%  Similarity=0.197  Sum_probs=67.1

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc----hh
Q 019199          184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD----HP  257 (344)
Q Consensus       184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~----~~  257 (344)
                      |+|+|+ |.+|..+++.+...|.+|+++.+++++.+.   ..+.+. ..|..+.+.+.+...++|+||.+++..    ..
T Consensus         1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~~~~~~d~~d~~~~~~al~~~d~vi~~~~~~~~~~~~   77 (183)
T PF13460_consen    1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGVEIIQGDLFDPDSVKAALKGADAVIHAAGPPPKDVDA   77 (183)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTEEEEESCTTCHHHHHHHHTTSSEEEECCHSTTTHHHH
T ss_pred             eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---ccccccceeeehhhhhhhhhhhhcchhhhhhhhhcccccc
Confidence            688998 999999999999999999999999997764   334332 234566666776667899999999842    22


Q ss_pred             HHHHHHhcccCC--EEEEEcCC
Q 019199          258 FDAYMSLLKVAG--VYVLVGFP  277 (344)
Q Consensus       258 ~~~~~~~l~~~G--~iv~~g~~  277 (344)
                      ...+++.++..|  +++.++..
T Consensus        78 ~~~~~~a~~~~~~~~~v~~s~~   99 (183)
T PF13460_consen   78 AKNIIEAAKKAGVKRVVYLSSA   99 (183)
T ss_dssp             HHHHHHHHHHTTSSEEEEEEET
T ss_pred             cccccccccccccccceeeecc
Confidence            556666664443  77777644

...

>COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only]

Probab=97.34  E-value=0.0011  Score=58.08  Aligned_cols=77  Identities=23%  Similarity=0.272  Sum_probs=58.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC----c---EEEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA----D---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~---~~v~~~~~~~~~~~-------~~  243 (344)
                      ..+.++||+|| +++|...+..+...|.+++.+.|+.++++.+.+++.-    .   ..+|..+++.+.++       ..
T Consensus         4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~~~~~~l~~~l~~~~~   83 (265)
T COG0300           4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDPEALERLEDELKERGG   83 (265)
T ss_pred             CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCChhHHHHHHHHHHhcCC
Confidence            46789999998 9999999999999999999999999999887666542    1   12344454443332       24


Q ss_pred             CccEEEECCCCc
Q 019199          244 SLDFIIDTASGD  255 (344)
Q Consensus       244 ~~dvvid~~g~~  255 (344)
                      .+|+.+|++|..
T Consensus        84 ~IdvLVNNAG~g   95 (265)
T COG0300          84 PIDVLVNNAGFG   95 (265)
T ss_pred             cccEEEECCCcC
Confidence            799999999853

>KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.34  E-value=0.0045  Score=54.76  Aligned_cols=110  Identities=19%  Similarity=0.193  Sum_probs=72.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCC-Cc-E---EEeCCCHHHHHH-------hc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLG-AD-K---FVVSSDLEQMKA-------LG  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g-~~-~---~v~~~~~~~~~~-------~~  242 (344)
                      -.|..|+|.|| +++|.+.+.-.-..|++++.+.+..++++...   ++.+ .+ .   ..|-.+.+..++       .-
T Consensus        10 ~~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~f   89 (282)
T KOG1205|consen   10 LAGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHF   89 (282)
T ss_pred             hCCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhc
Confidence            35788999998 89999988888889999888888877664441   2334 33 1   123444444332       23


Q ss_pred             CCccEEEECCCCc-------------------------hhHHHHHHhcccC--CEEEEEcCC-CccccCCceee
Q 019199          243 KSLDFIIDTASGD-------------------------HPFDAYMSLLKVA--GVYVLVGFP-SKVKFSPASLN  288 (344)
Q Consensus       243 ~~~dvvid~~g~~-------------------------~~~~~~~~~l~~~--G~iv~~g~~-~~~~~~~~~~~  288 (344)
                      +++|+.+++.|-.                         ...+.++..|++.  |+|+.++.. +...++..+++
T Consensus        90 g~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~~~~P~~~~Y  163 (282)
T KOG1205|consen   90 GRVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGKMPLPFRSIY  163 (282)
T ss_pred             CCCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccccCCCccccc
Confidence            7899999988743                         1233555556443  999999877 55555555444

>PRK08265 short chain dehydrogenase; Provisional

Probab=97.33  E-value=0.0074  Score=53.27  Aligned_cols=75  Identities=17%  Similarity=0.158  Sum_probs=55.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.++++...   ..|..+.+.+.+.       .+.+|++
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l   84 (261)
T PRK08265          5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL   84 (261)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999998 999999999998899999999999887766656665321   2344555443322       2578999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        85 v~~ag~   90 (261)
T PRK08265         85 VNLACT   90 (261)
T ss_pred             EECCCC
Confidence            998874

>PRK06182 short chain dehydrogenase; Validated

Probab=97.32  E-value=0.0054  Score=54.49  Aligned_cols=74  Identities=23%  Similarity=0.244  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .+.+++|+|+ |++|...++.+...|++|++++++.++++.+ ...+.. ...|..+.+.+.+.       .+++|++++
T Consensus         2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~-~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~   80 (273)
T PRK06182          2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDL-ASLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN   80 (273)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            3578999998 9999999999988999999999998877665 334433 23455665544332       257999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        81 ~ag~   84 (273)
T PRK06182         81 NAGY   84 (273)
T ss_pred             CCCc
Confidence            9874

>PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=97.30  E-value=0.0032  Score=55.89  Aligned_cols=95  Identities=19%  Similarity=0.228  Sum_probs=73.1

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+.....--.|.+++|+|.| .+|.-+++++...|++|+++.+....+                     
T Consensus       137 ~~PcTp~ai~~ll~~~~i~l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~~l---------------------  195 (286)
T PRK14175        137 FVPCTPLGIMEILKHADIDLEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSKDM---------------------  195 (286)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhH---------------------
Confidence            4677766667777766544689999999995 599999999999999999988653222                     


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+.+|++|.++|.+..+..  +.++++..++++|..
T Consensus       196 ~~~~~~ADIVIsAvg~p~~i~~--~~vk~gavVIDvGi~  232 (286)
T PRK14175        196 ASYLKDADVIVSAVGKPGLVTK--DVVKEGAVIIDVGNT  232 (286)
T ss_pred             HHHHhhCCEEEECCCCCcccCH--HHcCCCcEEEEcCCC
Confidence            2233569999999998864444  568999999999875

>PRK05693 short chain dehydrogenase; Provisional

Probab=97.28  E-value=0.0086  Score=53.20  Aligned_cols=72  Identities=21%  Similarity=0.205  Sum_probs=53.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEEECC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIIDTA  252 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvid~~  252 (344)
                      .++||+|+ |++|...++.+...|++|++++++.++.+.+ ...+... ..|..+.+.+.+.       .+++|+++++.
T Consensus         2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a   80 (274)
T PRK05693          2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEAL-AAAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA   80 (274)
T ss_pred             CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence            46899998 9999999999988999999999988877665 3445433 2466665444332       25799999998


Q ss_pred             CC
Q 019199          253 SG  254 (344)
Q Consensus       253 g~  254 (344)
                      |.
T Consensus        81 g~   82 (274)
T PRK05693         81 GY   82 (274)
T ss_pred             CC
Confidence            83

>cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=97.28  E-value=0.0043  Score=50.84  Aligned_cols=99  Identities=19%  Similarity=0.224  Sum_probs=70.3

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCCh-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ...||...++...+.....--.|.+++|+|+|. +|..++..++..|++|+++.+..+++..                  
T Consensus        22 ~~~p~~~~a~v~l~~~~~~~l~gk~vlViG~G~~~G~~~a~~L~~~g~~V~v~~r~~~~l~~------------------   83 (168)
T cd01080          22 GFIPCTPAGILELLKRYGIDLAGKKVVVVGRSNIVGKPLAALLLNRNATVTVCHSKTKNLKE------------------   83 (168)
T ss_pred             CccCChHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHhhCCCEEEEEECCchhHHH------------------
Confidence            456666666666666665446899999999986 5998999999999999888876432221                  


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcc
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKV  280 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~  280 (344)
                         ....+|+||.+++.+..+..  +.++++-.+++++.+.+.
T Consensus        84 ---~l~~aDiVIsat~~~~ii~~--~~~~~~~viIDla~prdv  121 (168)
T cd01080          84 ---HTKQADIVIVAVGKPGLVKG--DMVKPGAVVIDVGINRVP  121 (168)
T ss_pred             ---HHhhCCEEEEcCCCCceecH--HHccCCeEEEEccCCCcc
Confidence               22458999999988763333  356777777888776443

NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a

>cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase

Probab=97.21  E-value=0.0066  Score=51.13  Aligned_cols=78  Identities=23%  Similarity=0.238  Sum_probs=56.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE-EEeCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK-FVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~-~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      -.+.+++|+|+ |.+|..++..+...|++|+++.++.++.+.+.+.+    +... ..+..+.+.+.+...++|++|.++
T Consensus        26 l~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~diVi~at  105 (194)
T cd01078          26 LKGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIKGADVVFAAG  105 (194)
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHhcCCEEEECC
Confidence            46788999997 99999988888888999999999988776654443    3221 223445444444456799999988


Q ss_pred             CCch
Q 019199          253 SGDH  256 (344)
Q Consensus       253 g~~~  256 (344)
                      +...
T Consensus       106 ~~g~  109 (194)
T cd01078         106 AAGV  109 (194)
T ss_pred             CCCc
Confidence            7654

Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo

>KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism]

Probab=97.20  E-value=0.0068  Score=50.70  Aligned_cols=99  Identities=20%  Similarity=0.177  Sum_probs=70.3

Q ss_pred             CCCCEEEEECC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHh--------cCCccE
Q 019199          179 QPGKSLGVIGL--GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKAL--------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga--g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~--------~~~~dv  247 (344)
                      .....|||+|+  |++|+++..-....|+.|+++.+.-++-..+..++|. ..-+|..+++.+.+.        .++.|+
T Consensus         5 ~~~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~   84 (289)
T KOG1209|consen    5 SQPKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDL   84 (289)
T ss_pred             cCCCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEE
Confidence            34567899874  9999999888888999999999999987777567883 344566666544332        367899


Q ss_pred             EEECCCCchh------------------------HHHHH--HhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHP------------------------FDAYM--SLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~------------------------~~~~~--~~l~~~G~iv~~g~~  277 (344)
                      .++..|.+-+                        +.+++  ..++..|+||.+|..
T Consensus        85 L~NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl  140 (289)
T KOG1209|consen   85 LYNNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSL  140 (289)
T ss_pred             EEcCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecce
Confidence            9998875410                        11222  235778999999865

>PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional

Probab=97.18  E-value=0.0058  Score=57.12  Aligned_cols=113  Identities=20%  Similarity=0.233  Sum_probs=75.9

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-CcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~  238 (344)
                      ++..+..+.+..+.+...+++|++||.+|+| .|..+..+++..|++|++++.+++..+.+.+... ...-+...+.   
T Consensus       147 ~L~~Aq~~k~~~l~~~l~l~~g~rVLDIGcG-~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~~~l~v~~~~~D~---  222 (383)
T PRK11705        147 TLEEAQEAKLDLICRKLQLKPGMRVLDIGCG-WGGLARYAAEHYGVSVVGVTISAEQQKLAQERCAGLPVEIRLQDY---  222 (383)
T ss_pred             CHHHHHHHHHHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccCeEEEEECch---
Confidence            4444555556656555556899999999986 4777888888889999999999998888854432 1111111221   


Q ss_pred             HHhcCCccEEEEC-----CCC---chhHHHHHHhcccCCEEEEEcC
Q 019199          239 KALGKSLDFIIDT-----ASG---DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       239 ~~~~~~~dvvid~-----~g~---~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      ....+.+|.|+..     ++.   ...++.+.+.|+|+|+++....
T Consensus       223 ~~l~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~i  268 (383)
T PRK11705        223 RDLNGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHTI  268 (383)
T ss_pred             hhcCCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEEc
Confidence            1223569988643     332   2347788889999999987643

>PRK08339 short chain dehydrogenase; Provisional

Probab=97.17  E-value=0.013  Score=51.90  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---EEEeCCCHHHHHHh------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---KFVVSSDLEQMKAL------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~------~~~~  245 (344)
                      .|.++||+|+ +++|.+.++.+...|++|++++++.++++.+.+++    +.+   ...|-.+++.+.+.      -+++
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i   86 (263)
T PRK08339          7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP   86 (263)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence            4678999998 89999999999999999999999887766553332    322   22344554433322      1568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        87 D~lv~nag~   95 (263)
T PRK08339         87 DIFFFSTGG   95 (263)
T ss_pred             cEEEECCCC
Confidence            999998874

>PRK07825 short chain dehydrogenase; Provisional

Probab=97.15  E-value=0.017  Score=51.30  Aligned_cols=74  Identities=20%  Similarity=0.241  Sum_probs=54.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-Cc-EEEeCCCHHHHHH-------hcCCccEEEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-AD-KFVVSSDLEQMKA-------LGKSLDFIID  250 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~-------~~~~~dvvid  250 (344)
                      +.++||+|+ |++|...++.+...|++|+++++++++.+.+.+.++ .. ...|..+++.+.+       ..+++|++++
T Consensus         5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~   84 (273)
T PRK07825          5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN   84 (273)
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            578999998 999999999888889999999999888766645555 22 2235555544322       1267999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        85 ~ag~   88 (273)
T PRK07825         85 NAGV   88 (273)
T ss_pred             CCCc
Confidence            8874

>PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2

Probab=97.14  E-value=0.0015  Score=55.65  Aligned_cols=101  Identities=28%  Similarity=0.280  Sum_probs=64.1

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHH---HhCCCc--EEEeCCCHHHHHHhcCC
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEAL---SLLGAD--KFVVSSDLEQMKALGKS  244 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~---~~~g~~--~~v~~~~~~~~~~~~~~  244 (344)
                      +.+...+++|++||-+|+|+ |+.++-+++..|.  +|+.++..++-.+.++   +..|.+  .++..+...-+ .....
T Consensus        64 ~l~~L~l~pg~~VLeIGtGs-GY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg~~g~-~~~ap  141 (209)
T PF01135_consen   64 MLEALDLKPGDRVLEIGTGS-GYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDGSEGW-PEEAP  141 (209)
T ss_dssp             HHHHTTC-TT-EEEEES-TT-SHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-GGGTT-GGG-S
T ss_pred             HHHHHhcCCCCEEEEecCCC-cHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcchhhcc-ccCCC
Confidence            33444479999999999863 8889999988875  6888888877444443   334432  22222211111 11256


Q ss_pred             ccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ||.++-+.+.+..-...++.|+++|++|.-
T Consensus       142 fD~I~v~~a~~~ip~~l~~qL~~gGrLV~p  171 (209)
T PF01135_consen  142 FDRIIVTAAVPEIPEALLEQLKPGGRLVAP  171 (209)
T ss_dssp             EEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred             cCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence            999998888776567899999999999863

1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A ....

>PRK07109 short chain dehydrogenase; Provisional

Probab=97.11  E-value=0.012  Score=53.98  Aligned_cols=75  Identities=17%  Similarity=0.201  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.+++|+|+ |++|.++++.+...|++|+++++++++++.+.+   ..|...   ..|..+.+.+.+.       -+++
T Consensus         7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i   86 (334)
T PRK07109          7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI   86 (334)
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999998 999999999998899999999998877655433   335432   2355555444332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        87 D~lInnAg~   95 (334)
T PRK07109         87 DTWVNNAMV   95 (334)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK13940 glutamyl-tRNA reductase; Provisional

Probab=97.10  E-value=0.013  Score=55.16  Aligned_cols=99  Identities=15%  Similarity=0.194  Sum_probs=67.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      -.+.+++|+|+|.+|.+++..+...|+ +++++.++.++.+.+.++++....+..   +.+.+.-..+|+||+|++.++.
T Consensus       179 l~~kkvlviGaG~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~---~~l~~~l~~aDiVI~aT~a~~~  255 (414)
T PRK13940        179 ISSKNVLIIGAGQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYL---SELPQLIKKADIIIAAVNVLEY  255 (414)
T ss_pred             ccCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecH---HHHHHHhccCCEEEECcCCCCe
Confidence            467889999999999999999999997 899999998888777677762223322   2333334669999999998752


Q ss_pred             HHHHHHhcccCC-EEEEEcCCCccc
Q 019199          258 FDAYMSLLKVAG-VYVLVGFPSKVK  281 (344)
Q Consensus       258 ~~~~~~~l~~~G-~iv~~g~~~~~~  281 (344)
                      +-. .+.++... .+++++.+.+..
T Consensus       256 vi~-~~~~~~~~~~~iDLavPRdid  279 (414)
T PRK13940        256 IVT-CKYVGDKPRVFIDISIPQALD  279 (414)
T ss_pred             eEC-HHHhCCCCeEEEEeCCCCCCC
Confidence            211 12222222 357777774443

>PRK07576 short chain dehydrogenase; Provisional

Probab=97.06  E-value=0.011  Score=52.32  Aligned_cols=75  Identities=24%  Similarity=0.258  Sum_probs=52.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -++.++||+|+ |++|...++.+...|++|+++++++++.+...++   .+...   .+|..+.+.+.+.       .++
T Consensus         7 ~~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~   86 (264)
T PRK07576          7 FAGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGP   86 (264)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998 9999999999989999999999887765443222   23221   2355555443332       256


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|++|.+.|
T Consensus        87 iD~vi~~ag   95 (264)
T PRK07576         87 IDVLVSGAA   95 (264)
T ss_pred             CCEEEECCC
Confidence            899998875

>PRK06484 short chain dehydrogenase; Validated

Probab=97.06  E-value=0.016  Score=56.66  Aligned_cols=99  Identities=17%  Similarity=0.195  Sum_probs=70.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      ..|.++||+|+ +++|.+.++.+...|++|+++++++++++.+.++.+..   ...|..+++.+.+.       .+.+|+
T Consensus       267 ~~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~  346 (520)
T PRK06484        267 ESPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDV  346 (520)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence            45788999997 99999999999889999999999988887775566543   23355555443332       257999


Q ss_pred             EEECCCCch--------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDH--------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|++.|...                          ..+.++..++.+|+++.++..
T Consensus       347 li~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~  402 (520)
T PRK06484        347 LVNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSI  402 (520)
T ss_pred             EEECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECch
Confidence            999887420                          122334445667999988765

>PRK06484 short chain dehydrogenase; Validated

Probab=97.05  E-value=0.017  Score=56.42  Aligned_cols=76  Identities=24%  Similarity=0.269  Sum_probs=57.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      .++.++||+|+ +++|.+.++.+...|++|++++++.++++.+.++++..   ..+|..+++.+.++       .+++|+
T Consensus         3 ~~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~   82 (520)
T PRK06484          3 AQSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDV   82 (520)
T ss_pred             CCCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCE
Confidence            46788999998 89999999999999999999999988887776666643   23455555443332       267999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        83 li~nag~   89 (520)
T PRK06484         83 LVNNAGV   89 (520)
T ss_pred             EEECCCc
Confidence            9998874

>PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.04  E-value=0.011  Score=53.84  Aligned_cols=96  Identities=22%  Similarity=0.149  Sum_probs=66.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHH---hCCCcEEEe-CCCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGADKFVV-SSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~~~v~-~~~~~~~~~~~~~~dvvid  250 (344)
                      .++++++||.+|+| .|..++.+++..+.  +|+.++.+++..+.+++   ..|.+.+.. ..+..........+|+|+.
T Consensus        77 ~i~~g~~VLDIG~G-tG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~gD~~~~~~~~~~fD~Ii~  155 (322)
T PRK13943         77 GLDKGMRVLEIGGG-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCGDGYYGVPEFAPYDVIFV  155 (322)
T ss_pred             CCCCCCEEEEEeCC-ccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeCChhhcccccCCccEEEE
Confidence            34889999999997 49999999998764  69999999886655533   355443221 1221111011146999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEE
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVL  273 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~  273 (344)
                      +.+........++.|+++|+++.
T Consensus       156 ~~g~~~ip~~~~~~LkpgG~Lvv  178 (322)
T PRK13943        156 TVGVDEVPETWFTQLKEGGRVIV  178 (322)
T ss_pred             CCchHHhHHHHHHhcCCCCEEEE
Confidence            88866556678899999999876

>PRK05872 short chain dehydrogenase; Provisional

Probab=97.04  E-value=0.0054  Score=55.32  Aligned_cols=75  Identities=21%  Similarity=0.269  Sum_probs=56.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--cEE---EeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKF---VVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~---v~~~~~~~~~~~-------~~~~d  246 (344)
                      .|.++||+|+ |++|.++++.+...|++|++++++.++++.+.++++.  ...   .|..+.+.+.+.       .+++|
T Consensus         8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id   87 (296)
T PRK05872          8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID   87 (296)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence            5789999998 9999999999999999999999998887776566652  211   455555443322       26799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|++.|.
T Consensus        88 ~vI~nAG~   95 (296)
T PRK05872         88 VVVANAGI   95 (296)
T ss_pred             EEEECCCc
Confidence            99999884

>TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit

Probab=97.04  E-value=0.019  Score=43.98  Aligned_cols=97  Identities=20%  Similarity=0.212  Sum_probs=64.3

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      +.++++++-+|+|. |..+..+++..+ .+|+.++.++...+.+.+   .++..  .++..+...........+|+++..
T Consensus        17 ~~~~~~vldlG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~v~~~   95 (124)
T TIGR02469        17 LRPGDVLWDIGAGS-GSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEGDAPEALEDSLPEPDRVFIG   95 (124)
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEeccccccChhhcCCCCEEEEC
Confidence            36778899999875 888888898875 599999999887666532   33422  222222111111223579999875


Q ss_pred             CCC---chhHHHHHHhcccCCEEEEEc
Q 019199          252 ASG---DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       252 ~g~---~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .+.   ...++.+.+.|+++|+++...
T Consensus        96 ~~~~~~~~~l~~~~~~Lk~gG~li~~~  122 (124)
T TIGR02469        96 GSGGLLQEILEAIWRRLRPGGRIVLNA  122 (124)
T ss_pred             CcchhHHHHHHHHHHHcCCCCEEEEEe
Confidence            432   235788899999999998754

This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL.

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=97.03  E-value=0.012  Score=56.51  Aligned_cols=75  Identities=17%  Similarity=0.189  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      +|.++||+|+ |++|...++.+...|++|+++++..  ++.+.+.++++.. ..+|..+.+.+.+.       .+++|++
T Consensus       209 ~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~v  288 (450)
T PRK08261        209 AGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDIV  288 (450)
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            5789999998 9999999999999999999988743  3344443455543 33466665443332       2479999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |++.|.
T Consensus       289 i~~AG~  294 (450)
T PRK08261        289 VHNAGI  294 (450)
T ss_pred             EECCCc
Confidence            999883

>TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type

Probab=97.02  E-value=0.0028  Score=56.72  Aligned_cols=76  Identities=22%  Similarity=0.223  Sum_probs=54.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      .+.+++|+|+|+.+.+++..+...|+ +|+++.|+.++.+.+.+.++... +......+.+.....++|+||+|++..
T Consensus       124 ~~k~vlvlGaGGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~~~~~~~~~~~~~DiVInaTp~g  201 (282)
T TIGR01809       124 AGFRGLVIGAGGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLEGDSGGLAIEKAAEVLVSTVPAD  201 (282)
T ss_pred             CCceEEEEcCcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceeccchhhhhhcccCCCEEEECCCCC
Confidence            57889999999999999999999998 89999999998877766665321 111111112222335699999998753

This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway.

>PRK06505 enoyl-(acyl carrier protein) reductase; Provisional

Probab=97.02  E-value=0.03  Score=49.81  Aligned_cols=75  Identities=19%  Similarity=0.205  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADK--FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ +  ++|.+.++.+...|++|++++++++   +.+.+.++.|...  ..|-.+.+.+.++       .+.
T Consensus         6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   85 (271)
T PRK06505          6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK   85 (271)
T ss_pred             CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 4  8999999999889999999887653   2233323445332  2355555443332       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        86 iD~lVnnAG~   95 (271)
T PRK06505         86 LDFVVHAIGF   95 (271)
T ss_pred             CCEEEECCcc
Confidence            9999998873

>cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase

Probab=97.02  E-value=0.0056  Score=49.37  Aligned_cols=96  Identities=23%  Similarity=0.263  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      ..+.+++|+|+|.+|...++.+...| .+|++.+++.++.+.+.++++... .....+.   .+..+++|+++.+++...
T Consensus        17 ~~~~~i~iiG~G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~Dvvi~~~~~~~   93 (155)
T cd01065          17 LKGKKVLILGAGGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYLDL---EELLAEADLIINTTPVGM   93 (155)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeecch---hhccccCCEEEeCcCCCC
Confidence            45788999999999999998888886 589999999888777656666421 0111221   222467999999987643


Q ss_pred             h----HHHHHHhcccCCEEEEEcCC
Q 019199          257 P----FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       257 ~----~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .    .......++++..+++++..
T Consensus        94 ~~~~~~~~~~~~~~~~~~v~D~~~~  118 (155)
T cd01065          94 KPGDELPLPPSLLKPGGVVYDVVYN  118 (155)
T ss_pred             CCCCCCCCCHHHcCCCCEEEEcCcC
Confidence            1    11222446677777777543

Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann

>PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.01  E-value=0.0067  Score=51.89  Aligned_cols=99  Identities=23%  Similarity=0.221  Sum_probs=65.9

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCcc
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d  246 (344)
                      ....+++|++||-+|+|. |+.+..+++..+  .+|+.++.+++-.+.+++.   .|..  .++..+..... .....||
T Consensus        70 ~~l~~~~g~~VLdIG~Gs-G~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~gd~~~~~-~~~~~fD  147 (212)
T PRK13942         70 ELLDLKEGMKVLEIGTGS-GYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVGDGTLGY-EENAPYD  147 (212)
T ss_pred             HHcCCCCcCEEEEECCcc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CcCCCcC
Confidence            344458999999999864 777888888765  5899999998876655433   3422  22222211111 0125699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +++-..........+++.|+++|+++..
T Consensus       148 ~I~~~~~~~~~~~~l~~~LkpgG~lvi~  175 (212)
T PRK13942        148 RIYVTAAGPDIPKPLIEQLKDGGIMVIP  175 (212)
T ss_pred             EEEECCCcccchHHHHHhhCCCcEEEEE
Confidence            9976555555578889999999998764

>PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional

Probab=97.00  E-value=0.015  Score=49.51  Aligned_cols=99  Identities=22%  Similarity=0.168  Sum_probs=65.5

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHHhcCCc
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~~~~~~  245 (344)
                      +...++++++||-+|+|. |..+..+++..+  .+|+.++.+++..+.+.+   ..+..   .++..+..+.+. ..+.|
T Consensus        66 ~~l~~~~~~~VLDiG~Gs-G~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~d~~~~~~-~~~~f  143 (205)
T PRK13944         66 ELIEPRPGMKILEVGTGS-GYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHGDGKRGLE-KHAPF  143 (205)
T ss_pred             HhcCCCCCCEEEEECcCc-cHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEECCcccCCc-cCCCc
Confidence            333458899999999864 777888888764  589999999886655533   33421   222222111111 12579


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      |+++-+.........+.+.|+++|+++..
T Consensus       144 D~Ii~~~~~~~~~~~l~~~L~~gG~lvi~  172 (205)
T PRK13944        144 DAIIVTAAASTIPSALVRQLKDGGVLVIP  172 (205)
T ss_pred             cEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence            99987666555467888999999999764

>PRK12548 shikimate 5-dehydrogenase; Provisional

Probab=97.00  E-value=0.0066  Score=54.57  Aligned_cols=75  Identities=23%  Similarity=0.291  Sum_probs=50.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHhCCC---c---EEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---SKKEEALSLLGA---D---KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~---~~~~~~~~~~g~---~---~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      -.+.+++|+|+|++|.+++..+...|+ +|+++.++.   ++.+.+.+++..   .   ...+..+.+.+.+....+|++
T Consensus       124 ~~~k~vlI~GAGGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~Dil  203 (289)
T PRK12548        124 VKGKKLTVIGAGGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKIKQEVPECIVNVYDLNDTEKLKAEIASSDIL  203 (289)
T ss_pred             cCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHHhhcCCCceeEEechhhhhHHHhhhccCCEE
Confidence            357889999999999998888888999 499999886   555554344421   1   123333333333334568999


Q ss_pred             EECCC
Q 019199          249 IDTAS  253 (344)
Q Consensus       249 id~~g  253 (344)
                      ++++.
T Consensus       204 INaTp  208 (289)
T PRK12548        204 VNATL  208 (289)
T ss_pred             EEeCC
Confidence            99885

>COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism]

Probab=97.00  E-value=0.028  Score=52.44  Aligned_cols=100  Identities=26%  Similarity=0.376  Sum_probs=70.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      -.+.++||+|+|-+|..++..+...|. +|+++-|+.++...+.+++|+..+ .   .+.+...-..+|+||.+++.+.-
T Consensus       176 L~~~~vlvIGAGem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~~~~-~---l~el~~~l~~~DvVissTsa~~~  251 (414)
T COG0373         176 LKDKKVLVIGAGEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGAEAV-A---LEELLEALAEADVVISSTSAPHP  251 (414)
T ss_pred             cccCeEEEEcccHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCCeee-c---HHHHHHhhhhCCEEEEecCCCcc
Confidence            367889999999999999999999997 899999999998888789995432 2   22223333569999999886531


Q ss_pred             ---HHHHHHhcccC-C-EEEEEcCCCcccc
Q 019199          258 ---FDAYMSLLKVA-G-VYVLVGFPSKVKF  282 (344)
Q Consensus       258 ---~~~~~~~l~~~-G-~iv~~g~~~~~~~  282 (344)
                         -....+.++.. . -+++++.+.+..-
T Consensus       252 ii~~~~ve~a~~~r~~~livDiavPRdie~  281 (414)
T COG0373         252 IITREMVERALKIRKRLLIVDIAVPRDVEP  281 (414)
T ss_pred             ccCHHHHHHHHhcccCeEEEEecCCCCCCc
Confidence               22333344332 2 4677777744443

>PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.97  E-value=0.021  Score=49.75  Aligned_cols=75  Identities=23%  Similarity=0.189  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--Cc---EEEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--AD---KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~---~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |.+|..+++.+...|++|+++++++++.+.+...+.  ..   ...|..+.+.+.+.       .+++|
T Consensus         4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   83 (251)
T PRK07231          4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD   83 (251)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4578999998 999999999988889999999999887665533332  11   12244444443322       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|.+.|.
T Consensus        84 ~vi~~ag~   91 (251)
T PRK07231         84 ILVNNAGT   91 (251)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=96.97  E-value=0.0057  Score=59.25  Aligned_cols=73  Identities=18%  Similarity=0.233  Sum_probs=55.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      .+|++|+|+|.|..|++++.+++..|++|++.+..+++.+.+ +++|.......+..+.+    ..+|+|+.+.|-+.
T Consensus        10 ~~~~~v~V~G~G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l-~~~g~~~~~~~~~~~~l----~~~D~VV~SpGi~~   82 (488)
T PRK03369         10 LPGAPVLVAGAGVTGRAVLAALTRFGARPTVCDDDPDALRPH-AERGVATVSTSDAVQQI----ADYALVVTSPGFRP   82 (488)
T ss_pred             cCCCeEEEEcCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HhCCCEEEcCcchHhHh----hcCCEEEECCCCCC
Confidence            578899999999999999999999999999999777666655 56787433222222222    45899999998654

>PRK08415 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.96  E-value=0.027  Score=50.14  Aligned_cols=98  Identities=19%  Similarity=0.193  Sum_probs=65.2

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGADK--FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+   +++|+++++.+...|++|+++++++   ++.+.+.++++...  ..|-.+.+.+.+.       .++
T Consensus         4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~   83 (274)
T PRK08415          4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK   83 (274)
T ss_pred             CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999986   4899999998888999999988874   23444434455332  3455555443322       267


Q ss_pred             ccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+++++.|...                             ..+.++..++.+|+|+.++..
T Consensus        84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~  145 (274)
T PRK08415         84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYL  145 (274)
T ss_pred             CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecC
Confidence            999999887410                             123444556677999988654

>PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase

Probab=96.95  E-value=0.0055  Score=57.52  Aligned_cols=93  Identities=23%  Similarity=0.230  Sum_probs=66.7

Q ss_pred             EEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh-CC---CcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL-LG---ADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~-~g---~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      |+|+|+|.+|..+++.+.....  +|++.+++.++.+.+.++ .+   ....+|..+.+.+.++.++.|+|++|+|....
T Consensus         1 IlvlG~G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~dvVin~~gp~~~   80 (386)
T PF03435_consen    1 ILVLGAGRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDPESLAELLRGCDVVINCAGPFFG   80 (386)
T ss_dssp             EEEE--SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTHHHHHHHHTTSSEEEE-SSGGGH
T ss_pred             CEEEcCcHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCHHHHHHHHhcCCEEEECCccchh
Confidence            6788999999999999887764  899999999998777544 22   23456777777788877888999999987654


Q ss_pred             HHHHHHhcccCCEEEEEcC
Q 019199          258 FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~  276 (344)
                      ..-+-.|++.+-.+++.+.
T Consensus        81 ~~v~~~~i~~g~~yvD~~~   99 (386)
T PF03435_consen   81 EPVARACIEAGVHYVDTSY   99 (386)
T ss_dssp             HHHHHHHHHHT-EEEESS-
T ss_pred             HHHHHHHHHhCCCeeccch
Confidence            6666677888888888643

Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A.

>PRK12939 short chain dehydrogenase; Provisional

Probab=96.95  E-value=0.017  Score=50.22  Aligned_cols=75  Identities=20%  Similarity=0.157  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      ++.+++|+|+ |++|...+..+...|++|+++++++++.....++   .+..   ...|-.+.+.+.+.       .+++
T Consensus         6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   85 (250)
T PRK12939          6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL   85 (250)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999988999999998887765544332   2322   12244555443322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.|.
T Consensus        86 d~vi~~ag~   94 (250)
T PRK12939         86 DGLVNNAGI   94 (250)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK07523 gluconate 5-dehydrogenase; Provisional

Probab=96.94  E-value=0.021  Score=50.02  Aligned_cols=75  Identities=20%  Similarity=0.214  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+.+   |...   ..|..+.+.+.+.       .+.+
T Consensus         9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   88 (255)
T PRK07523          9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI   88 (255)
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence            4688999998 99999999988888999999999887665443332   3211   2245554443332       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.|.
T Consensus        89 d~li~~ag~   97 (255)
T PRK07523         89 DILVNNAGM   97 (255)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK07060 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.0082  Score=52.18  Aligned_cols=76  Identities=18%  Similarity=0.200  Sum_probs=56.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh---cCCccEEEECCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~---~~~~dvvid~~g  253 (344)
                      ..+.+++|+|+ |++|...++.+...|++|++++++.++.+.+.+..+... ..|..+.+.+.+.   .+++|++|++.|
T Consensus         7 ~~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~d~vi~~ag   86 (245)
T PRK07060          7 FSGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDDAAIRAALAAAGAFDGLVNCAG   86 (245)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCHHHHHHHHHHhCCCCEEEECCC
Confidence            35678999998 999999999999999999999998887766655555433 2355555544332   256899999887


Q ss_pred             C
Q 019199          254 G  254 (344)
Q Consensus       254 ~  254 (344)
                      .
T Consensus        87 ~   87 (245)
T PRK07060         87 I   87 (245)
T ss_pred             C
Confidence            4

>PRK06180 short chain dehydrogenase; Provisional

Probab=96.94  E-value=0.03  Score=49.81  Aligned_cols=75  Identities=17%  Similarity=0.250  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+..+..   ...|..+.+.+.+.       .+++|++
T Consensus         3 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~v   82 (277)
T PRK06180          3 SMKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVL   82 (277)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            3567999998 99999999999889999999999988776664333321   12355555444332       1468999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        83 v~~ag~   88 (277)
T PRK06180         83 VNNAGY   88 (277)
T ss_pred             EECCCc
Confidence            999885

>PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.93  E-value=0.011  Score=52.72  Aligned_cols=93  Identities=20%  Similarity=0.214  Sum_probs=65.2

Q ss_pred             chhhhHhHHHHHhccCCCCCCEEEEECCCh-HHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH
Q 019199          162 LCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA  240 (344)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~-~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~  240 (344)
                      +|+-......+......-.|.+++|+|+|+ +|...+.++...|++|+++.+....+..                     
T Consensus       140 p~T~~gii~~L~~~~i~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t~~L~~---------------------  198 (283)
T PRK14192        140 SATPAGIMRLLKAYNIELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRTQNLPE---------------------  198 (283)
T ss_pred             CCcHHHHHHHHHHcCCCCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCchhHHH---------------------
Confidence            443333333444444446899999999976 9999999999999999888764332221                     


Q ss_pred             hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..+++|++++++|.+..+.  .+.++++..++++|..
T Consensus       199 ~~~~aDIvI~AtG~~~~v~--~~~lk~gavViDvg~n  233 (283)
T PRK14192        199 LVKQADIIVGAVGKPELIK--KDWIKQGAVVVDAGFH  233 (283)
T ss_pred             HhccCCEEEEccCCCCcCC--HHHcCCCCEEEEEEEe
Confidence            1146899999998766332  3568999999888865

>PRK06139 short chain dehydrogenase; Provisional

Probab=96.93  E-value=0.0068  Score=55.60  Aligned_cols=75  Identities=20%  Similarity=0.296  Sum_probs=55.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++++.+.+   ..|.+.   ..|..+.+.+.+.       .+++
T Consensus         6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   85 (330)
T PRK06139          6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASFGGRI   85 (330)
T ss_pred             CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHhcCCC
Confidence            5678999998 999999999999999999999999887765433   345432   2355555544332       2679


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        86 D~lVnnAG~   94 (330)
T PRK06139         86 DVWVNNVGV   94 (330)
T ss_pred             CEEEECCCc
Confidence            999999873

>PRK08618 ornithine cyclodeaminase; Validated

Probab=96.92  E-value=0.0044  Score=56.70  Aligned_cols=93  Identities=19%  Similarity=0.163  Sum_probs=65.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHH-HHCCC-eEEEEeCCchhHHHHHHhC----CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFG-KAFGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a-~~~g~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      +...+++|+|+|..|.+.+..+ ...++ +|.+.++++++.+.+.+++    +... ....+.   ++.-.+.|+|+.++
T Consensus       125 ~~~~~v~iiGaG~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~~-~~~~~~---~~~~~~aDiVi~aT  200 (325)
T PRK08618        125 EDAKTLCLIGTGGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTEI-YVVNSA---DEAIEEADIIVTVT  200 (325)
T ss_pred             CCCcEEEEECCcHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCcE-EEeCCH---HHHHhcCCEEEEcc
Confidence            5567899999999998777554 45677 8899999988876665433    4332 223332   22235799999999


Q ss_pred             CCchhHHHHHHhcccCCEEEEEcCC
Q 019199          253 SGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       253 g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++.+.+ .. +.++++-.+..+|..
T Consensus       201 ~s~~p~-i~-~~l~~G~hV~~iGs~  223 (325)
T PRK08618        201 NAKTPV-FS-EKLKKGVHINAVGSF  223 (325)
T ss_pred             CCCCcc-hH-HhcCCCcEEEecCCC
Confidence            876533 33 899999999999875

>PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4)

Probab=96.90  E-value=0.0055  Score=54.46  Aligned_cols=103  Identities=25%  Similarity=0.261  Sum_probs=60.9

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC--cEEEeCCCHHHHHHhcC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA--DKFVVSSDLEQMKALGK  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~--~~~v~~~~~~~~~~~~~  243 (344)
                      +..+.+...+++|++||-+|+| .|-.++.+++..|++|+.++.+++..+.+++   +.|.  ...+...+..   +...
T Consensus        51 ~~~~~~~~~l~~G~~vLDiGcG-wG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~D~~---~~~~  126 (273)
T PF02353_consen   51 LDLLCEKLGLKPGDRVLDIGCG-WGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQDYR---DLPG  126 (273)
T ss_dssp             HHHHHTTTT--TT-EEEEES-T-TSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES-GG---G---
T ss_pred             HHHHHHHhCCCCCCEEEEeCCC-ccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEeecc---ccCC
Confidence            4445555567999999999987 5777888998889999999999887766532   3442  1122222221   2234


Q ss_pred             CccEEEE-----CCCCc---hhHHHHHHhcccCCEEEEEc
Q 019199          244 SLDFIID-----TASGD---HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       244 ~~dvvid-----~~g~~---~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .||.|+.     .+|..   ..+..+.+.|+|+|+++.-.
T Consensus       127 ~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq~  166 (273)
T PF02353_consen  127 KFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQT  166 (273)
T ss_dssp             S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEEE
T ss_pred             CCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEEe
Confidence            7888754     44422   33778888999999997443

All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: S-adenosyl-L-methionine + phospholipid olefinic fatty acid -> S-adenosyl-L-homocysteine + phospholipid cyclopropane fatty acid. The major mycolic acid produced by Mycobacterium tuberculosis contains two cis-cyclopropanes in the meromycolate chain. Cyclopropanation may contribute to the structural integrity of the cell wall complex [].; GO: 0008610 lipid biosynthetic process; PDB: 3HA5_A 2FK8_A 3HA7_A 3HA3_A 2FK7_A 1KPG_D 1KP9_B 1KPH_D 3VC2_E 3VC1_D ....

>PRK00258 aroE shikimate 5-dehydrogenase; Reviewed

Probab=96.89  E-value=0.007  Score=54.08  Aligned_cols=95  Identities=21%  Similarity=0.275  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      ..+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++....+... . ...+...++|+++++++....
T Consensus       121 ~~~k~vlVlGaGg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~~-~-~~~~~~~~~DivInaTp~g~~  198 (278)
T PRK00258        121 LKGKRILILGAGGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAELD-L-ELQEELADFDLIINATSAGMS  198 (278)
T ss_pred             CCCCEEEEEcCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceeec-c-cchhccccCCEEEECCcCCCC
Confidence            457789999999999999999999995 9999999998887776665522101110 0 111223569999999874320


Q ss_pred             -----HHHHHHhcccCCEEEEEc
Q 019199          258 -----FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 -----~~~~~~~l~~~G~iv~~g  275 (344)
                           .......+++...++++-
T Consensus       199 ~~~~~~~~~~~~l~~~~~v~Div  221 (278)
T PRK00258        199 GELPLPPLPLSLLRPGTIVYDMI  221 (278)
T ss_pred             CCCCCCCCCHHHcCCCCEEEEee
Confidence                 011235566666666663

>COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism]

Probab=96.88  E-value=0.0074  Score=51.59  Aligned_cols=93  Identities=22%  Similarity=0.312  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCCcEEEeCCCHH--HHHHhcCCccEEEE---
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGADKFVVSSDLE--QMKALGKSLDFIID---  250 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~~~v~~~~~~--~~~~~~~~~dvvid---  250 (344)
                      -+|.+||-+|+|+ |+...-+|+ +|++|+.+|-+++-.+.++   .+-|..  +++....  .+...++.||+|+.   
T Consensus        58 l~g~~vLDvGCGg-G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak~ha~e~gv~--i~y~~~~~edl~~~~~~FDvV~cmEV  133 (243)
T COG2227          58 LPGLRVLDVGCGG-GILSEPLAR-LGASVTGIDASEKPIEVAKLHALESGVN--IDYRQATVEDLASAGGQFDVVTCMEV  133 (243)
T ss_pred             CCCCeEEEecCCc-cHhhHHHHH-CCCeeEEecCChHHHHHHHHhhhhcccc--ccchhhhHHHHHhcCCCccEEEEhhH
Confidence            4788999999953 666666665 6799999999999877773   122322  4454432  23333478999964   


Q ss_pred             --CCCCch-hHHHHHHhcccCCEEEEEc
Q 019199          251 --TASGDH-PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       251 --~~g~~~-~~~~~~~~l~~~G~iv~~g  275 (344)
                        .+..+. .++...++++|+|.++..-
T Consensus       134 lEHv~dp~~~~~~c~~lvkP~G~lf~ST  161 (243)
T COG2227         134 LEHVPDPESFLRACAKLVKPGGILFLST  161 (243)
T ss_pred             HHccCCHHHHHHHHHHHcCCCcEEEEec
Confidence              555544 3677888999999997663

>PRK12549 shikimate 5-dehydrogenase; Reviewed

Probab=96.86  E-value=0.0055  Score=54.86  Aligned_cols=72  Identities=17%  Similarity=0.242  Sum_probs=52.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC----CcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ..+.+|+|+|+|+.|.+++..+...|+ +|++++++.++.+.+.+.++    ...+....+   +.+...++|++|+++.
T Consensus       125 ~~~k~vlIlGaGGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~~---~~~~~~~aDiVInaTp  201 (284)
T PRK12549        125 ASLERVVQLGAGGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGSD---LAAALAAADGLVHATP  201 (284)
T ss_pred             ccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEeccc---hHhhhCCCCEEEECCc
Confidence            456889999999999999999999998 89999999988877755543    122222221   1222356999999964

>PLN00203 glutamyl-tRNA reductase

Probab=96.86  E-value=0.013  Score=56.70  Aligned_cols=98  Identities=19%  Similarity=0.302  Sum_probs=65.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--h
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--P  257 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--~  257 (344)
                      +.+|+|+|+|.+|.+++..+...|+ +|+++.++.++.+.+.+.++... +.....+...+...++|+||.+++.+.  .
T Consensus       266 ~kkVlVIGAG~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al~~aDVVIsAT~s~~pvI  344 (519)
T PLN00203        266 SARVLVIGAGKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACAAEADVVFTSTSSETPLF  344 (519)
T ss_pred             CCEEEEEeCHHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHHhcCCEEEEccCCCCCee
Confidence            6889999999999999999999998 79999999998887766664221 111222223333467999999987543  2


Q ss_pred             HHHHHHhccc----CC---EEEEEcCCCc
Q 019199          258 FDAYMSLLKV----AG---VYVLVGFPSK  279 (344)
Q Consensus       258 ~~~~~~~l~~----~G---~iv~~g~~~~  279 (344)
                      ....++.+.+    .+   .+++++.+.+
T Consensus       345 ~~e~l~~~~~~~~~~~~~~~~IDLAvPRd  373 (519)
T PLN00203        345 LKEHVEALPPASDTVGGKRLFVDISVPRN  373 (519)
T ss_pred             CHHHHHHhhhcccccCCCeEEEEeCCCCC
Confidence            3344444422    12   4677777643

>PRK07326 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.015  Score=50.29  Aligned_cols=75  Identities=23%  Similarity=0.178  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cEE--EeCCCHHHHHH----h---cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKF--VVSSDLEQMKA----L---GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~--v~~~~~~~~~~----~---~~~~d  246 (344)
                      .+.+++|+|+ |.+|..+++.+...|++|+++++++++...+.+.+..   -+.  .|..+.+.+.+    .   .+++|
T Consensus         5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   84 (237)
T PRK07326          5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD   84 (237)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999998 9999999998888899999999988776655444431   111  24444443322    1   24799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|++.|.
T Consensus        85 ~vi~~ag~   92 (237)
T PRK07326         85 VLIANAGV   92 (237)
T ss_pred             EEEECCCC
Confidence            99998764

>PRK06057 short chain dehydrogenase; Provisional

Probab=96.85  E-value=0.012  Score=51.70  Aligned_cols=75  Identities=21%  Similarity=0.180  Sum_probs=55.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+...++++.. ...|..+++.+.+.       .+++|+++.
T Consensus         6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   85 (255)
T PRK06057          6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN   85 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4789999998 99999999999989999999999887766554555532 23455555444332       257899999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        86 ~ag~   89 (255)
T PRK06057         86 NAGI   89 (255)
T ss_pred             CCCc
Confidence            8874

>COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism]

Probab=96.84  E-value=0.0063  Score=54.09  Aligned_cols=82  Identities=22%  Similarity=0.333  Sum_probs=57.5

Q ss_pred             HHHHHhcc--CCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE----EEeCCCHHHHHHh
Q 019199          169 YTPMMRHK--MNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK----FVVSSDLEQMKAL  241 (344)
Q Consensus       169 ~~~l~~~~--~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~  241 (344)
                      +.+|.+..  ...+|++++|+|+|+.+.+++..++..|+ +|+++.|+.+|.+.+.+.++...    .....+.+.   .
T Consensus       112 ~~~L~~~~~~~~~~~~~vlilGAGGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~~~~~~~~~~~~~~~~~---~  188 (283)
T COG0169         112 LRALKEFGLPVDVTGKRVLILGAGGAARAVAFALAEAGAKRITVVNRTRERAEELADLFGELGAAVEAAALADLEG---L  188 (283)
T ss_pred             HHHHHhcCCCcccCCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccccccccccccccc---c
Confidence            44455433  22468999999999999999999999997 89999999999888866666321    111111111   0


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                       ..+|+++|+++.
T Consensus       189 -~~~dliINaTp~  200 (283)
T COG0169         189 -EEADLLINATPV  200 (283)
T ss_pred             -cccCEEEECCCC
Confidence             158999998874

>PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional

Probab=96.81  E-value=0.011  Score=52.27  Aligned_cols=75  Identities=21%  Similarity=0.135  Sum_probs=54.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++..   ...|..+.+.+.+.       .+++|++
T Consensus         5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   84 (263)
T PRK06200          5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF   84 (263)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4678999998 99999999999889999999999988877765555532   12344444433221       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        85 i~~ag~   90 (263)
T PRK06200         85 VGNAGI   90 (263)
T ss_pred             EECCCC
Confidence            998873

>PRK12367 short chain dehydrogenase; Provisional

Probab=96.80  E-value=0.0098  Score=52.08  Aligned_cols=74  Identities=26%  Similarity=0.195  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCC-cEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGA-DKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      .+.+++|+|+ |++|.+.++.+...|++|++++++.. +.+.. ..... ....|-.+.+.+.+..+++|+++++.|.
T Consensus        13 ~~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~iDilVnnAG~   89 (245)
T PRK12367         13 QGKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-DESPNEWIKWECGKEESLDKQLASLDVLILNHGI   89 (245)
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-ccCCCeEEEeeCCCHHHHHHhcCCCCEEEECCcc
Confidence            4678999998 99999999999889999999988763 22222 11111 1234555666555555679999999874

>PRK09242 tropinone reductase; Provisional

Probab=96.80  E-value=0.039  Score=48.42  Aligned_cols=75  Identities=20%  Similarity=0.258  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHH-------hcC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKA-------LGK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~-------~~~  243 (344)
                      .|.++||+|+ |++|...+..+...|++|++++++.++.+.+.+++     +.+.   ..|..+.+.+.+       ..+
T Consensus         8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   87 (257)
T PRK09242          8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD   87 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            4778999998 99999999999999999999999887765553332     2221   224444433322       126


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++.+.|.
T Consensus        88 ~id~li~~ag~   98 (257)
T PRK09242         88 GLHILVNNAGG   98 (257)
T ss_pred             CCCEEEECCCC
Confidence            79999999974

>PRK06603 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.79  E-value=0.053  Score=47.79  Aligned_cols=74  Identities=15%  Similarity=0.221  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADK--FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ +  ++|.+.++.+...|++|++.+++++   ..+.+.++.|...  .+|-.+++.+.+.       .++
T Consensus         7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (260)
T PRK06603          7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS   86 (260)
T ss_pred             CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678899987 4  7999988888888999998887632   2333333345332  2455565443332       257


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|+++++.|
T Consensus        87 iDilVnnag   95 (260)
T PRK06603         87 FDFLLHGMA   95 (260)
T ss_pred             ccEEEEccc
Confidence            999999876

>PRK14027 quinate/shikimate dehydrogenase; Provisional

Probab=96.78  E-value=0.012  Score=52.51  Aligned_cols=74  Identities=16%  Similarity=0.259  Sum_probs=51.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC----CcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----ADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ..+.+++|+|+|+.+.+++..+...|+ +++++.++.++.+.+.+.+.    ...+ ...+.....+....+|+++|++.
T Consensus       125 ~~~k~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~~~~~~~~~~-~~~~~~~~~~~~~~~divINaTp  203 (283)
T PRK14027        125 AKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAV-VGVDARGIEDVIAAADGVVNATP  203 (283)
T ss_pred             cCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhccCcceE-EecCHhHHHHHHhhcCEEEEcCC
Confidence            457889999999999999988888998 89999999888777755542    2111 11111111222246999999886

>CHL00194 ycf39 Ycf39; Provisional

Probab=96.77  E-value=0.017  Score=52.63  Aligned_cols=94  Identities=26%  Similarity=0.202  Sum_probs=64.6

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhcCCccEEEECCCCch----
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLDFIIDTASGDH----  256 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~dvvid~~g~~~----  256 (344)
                      +|+|+|+ |.+|..++..+...|.+|++++++.++...+ ...+.+.+. |..+++.+.+.-.++|+||.+++...    
T Consensus         2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l-~~~~v~~v~~Dl~d~~~l~~al~g~d~Vi~~~~~~~~~~~   80 (317)
T CHL00194          2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFL-KEWGAELVYGDLSLPETLPPSFKGVTAIIDASTSRPSDLY   80 (317)
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhH-hhcCCEEEECCCCCHHHHHHHHCCCCEEEECCCCCCCCcc
Confidence            6899998 9999999999988999999999987655443 344544322 44566666666678999999875321    


Q ss_pred             --------hHHHHHHhcccCC--EEEEEcCC
Q 019199          257 --------PFDAYMSLLKVAG--VYVLVGFP  277 (344)
Q Consensus       257 --------~~~~~~~~l~~~G--~iv~~g~~  277 (344)
                              ....+++.++..|  +++.++..
T Consensus        81 ~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~  111 (317)
T CHL00194         81 NAKQIDWDGKLALIEAAKAAKIKRFIFFSIL  111 (317)
T ss_pred             chhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence                    1134555554444  78877653

>PRK07832 short chain dehydrogenase; Provisional

Probab=96.76  E-value=0.055  Score=47.97  Aligned_cols=72  Identities=19%  Similarity=0.236  Sum_probs=50.6

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc----EEEeCCCHHHHHHh-------cCCccE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD----KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~----~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      +++|+|+ |++|..+++.+...|++|++++++++..+.+.++   .+..    ...|..+.+.+.+.       .+++|+
T Consensus         2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~   81 (272)
T PRK07832          2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV   81 (272)
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence            6889987 9999999999888999999999887765444222   2332    23455665443321       257999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        82 lv~~ag~   88 (272)
T PRK07832         82 VMNIAGI   88 (272)
T ss_pred             EEECCCC
Confidence            9999874

>PRK08267 short chain dehydrogenase; Provisional

Probab=96.74  E-value=0.03  Score=49.23  Aligned_cols=73  Identities=22%  Similarity=0.243  Sum_probs=53.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-C---cEEEeCCCHHHHHHh--------cCCccEE
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-A---DKFVVSSDLEQMKAL--------GKSLDFI  248 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~---~~~v~~~~~~~~~~~--------~~~~dvv  248 (344)
                      .++||+|+ |++|...++.+...|++|++++++.++.+.+.+..+ .   ...+|..+.+.+.+.        .+++|++
T Consensus         2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v   81 (260)
T PRK08267          2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL   81 (260)
T ss_pred             cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence            46899998 999999999888899999999999888776644443 1   123455554433321        3578999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +.+.|.
T Consensus        82 i~~ag~   87 (260)
T PRK08267         82 FNNAGI   87 (260)
T ss_pred             EECCCC
Confidence            998874

>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]

Probab=96.74  E-value=0.006  Score=53.87  Aligned_cols=108  Identities=22%  Similarity=0.298  Sum_probs=73.5

Q ss_pred             hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc-E-EEeCCCHHHHHH
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD-K-FVVSSDLEQMKA  240 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~-~-~v~~~~~~~~~~  240 (344)
                      ..++..+.+...+++|++||=+|+| -|..++.+|+..|++|+.++-+++..+.+.+   +.|.. . -+-..+   .+.
T Consensus        58 ~~k~~~~~~kl~L~~G~~lLDiGCG-WG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d---~rd  133 (283)
T COG2230          58 RAKLDLILEKLGLKPGMTLLDIGCG-WGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQD---YRD  133 (283)
T ss_pred             HHHHHHHHHhcCCCCCCEEEEeCCC-hhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecc---ccc
Confidence            3456666667777999999999997 3778899999999999999999987766643   34533 1 111111   111


Q ss_pred             hcCCccEEE-----ECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          241 LGKSLDFII-----DTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       241 ~~~~~dvvi-----d~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..+.||-++     +.+|.   +.-+..+-+.|+++|++++-...
T Consensus       134 ~~e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~  178 (283)
T COG2230         134 FEEPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSIT  178 (283)
T ss_pred             cccccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEec
Confidence            223477764     45554   23377888899999999876554

>PRK12429 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.73  E-value=0.056  Score=47.23  Aligned_cols=75  Identities=21%  Similarity=0.189  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |.+|...++.+...|++|+++++++++.+.+.++.   +..   ...|..+.+.+.+.       .+++
T Consensus         3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   82 (258)
T PRK12429          3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV   82 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999997 99999999988888999999999888665443332   322   22344554443322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.+.
T Consensus        83 d~vi~~a~~   91 (258)
T PRK12429         83 DILVNNAGI   91 (258)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK09186 flagellin modification protein A; Provisional

Probab=96.72  E-value=0.028  Score=49.17  Aligned_cols=74  Identities=22%  Similarity=0.175  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---E-EEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---K-FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~-~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++    +..   . ..|-.+++.+.+.       -+
T Consensus         3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~   82 (256)
T PRK09186          3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG   82 (256)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence            4688999998 99999999999989999999998887765553333    221   1 2355555444332       25


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|+++.+.+
T Consensus        83 ~id~vi~~A~   92 (256)
T PRK09186         83 KIDGAVNCAY   92 (256)
T ss_pred             CccEEEECCc
Confidence            6899999875

>TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase

Probab=96.70  E-value=0.016  Score=49.67  Aligned_cols=98  Identities=26%  Similarity=0.256  Sum_probs=63.5

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dv  247 (344)
                      ...++++++||-+|+|. |..++.+++..+.  +|+.++.+++..+.+++   +.|.+  .++..+..+.. .....||+
T Consensus        72 ~l~~~~~~~VLDiG~Gs-G~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v~~~~~d~~~~~-~~~~~fD~  149 (215)
T TIGR00080        72 LLELKPGMKVLEIGTGS-GYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNVIVIVGDGTQGW-EPLAPYDR  149 (215)
T ss_pred             HhCCCCcCEEEEECCCc-cHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCeEEEECCcccCC-cccCCCCE
Confidence            33458999999999863 7777788887654  69999998886655533   33432  12221111111 11246999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ++-..........+.+.|+++|+++..
T Consensus       150 Ii~~~~~~~~~~~~~~~L~~gG~lv~~  176 (215)
T TIGR00080       150 IYVTAAGPKIPEALIDQLKEGGILVMP  176 (215)
T ss_pred             EEEcCCcccccHHHHHhcCcCcEEEEE
Confidence            875554444467888999999998754

Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt.

>PRK10538 malonic semialdehyde reductase; Provisional

Probab=96.70  E-value=0.054  Score=47.27  Aligned_cols=72  Identities=15%  Similarity=0.193  Sum_probs=51.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      +++|+|+ |++|.+.+..+...|++|+++++++++.+.+.+.++...   ..|-.+.+.+.+.       .+++|+++.+
T Consensus         2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~   81 (248)
T PRK10538          2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN   81 (248)
T ss_pred             EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            5889997 999999999998899999999999887766644455322   2344454433221       2579999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        82 ag~   84 (248)
T PRK10538         82 AGL   84 (248)
T ss_pred             CCc
Confidence            864

>PRK07806 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.021  Score=49.75  Aligned_cols=98  Identities=26%  Similarity=0.258  Sum_probs=62.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH---HhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEAL---SLLGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~---~~~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|...+..+...|++|+++.++.+ +.+.+.   +..+..   ...|..+.+.+.+.       .++
T Consensus         5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   84 (248)
T PRK07806          5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG   84 (248)
T ss_pred             CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence            4678999998 99999999998889999998887653 333221   222322   12355555443322       246


Q ss_pred             ccEEEECCCCc-------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASGD-------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~-------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+++.+.+..                   ..++.+...+...|+++.++..
T Consensus        85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~  136 (248)
T PRK07806         85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH  136 (248)
T ss_pred             CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence            89998877642                   1234444445556899988653

>PRK12829 short chain dehydrogenase; Provisional

Probab=96.69  E-value=0.014  Score=51.43  Aligned_cols=77  Identities=19%  Similarity=0.175  Sum_probs=55.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc----EEEeCCCHHHHHHh-------cCCcc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD----KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      -++.++||+|+ |++|..++..+...|++|++++++.++.+.+.+..+..    ...|..+++.+.+.       .+++|
T Consensus         9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d   88 (264)
T PRK12829          9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD   88 (264)
T ss_pred             cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence            46789999998 99999999999999999999999877666553333322    22344555443321       25799


Q ss_pred             EEEECCCCc
Q 019199          247 FIIDTASGD  255 (344)
Q Consensus       247 vvid~~g~~  255 (344)
                      +||.+.|..
T Consensus        89 ~vi~~ag~~   97 (264)
T PRK12829         89 VLVNNAGIA   97 (264)
T ss_pred             EEEECCCCC
Confidence            999988753

>PRK12749 quinate/shikimate dehydrogenase; Reviewed

Probab=96.68  E-value=0.019  Score=51.54  Aligned_cols=86  Identities=14%  Similarity=0.186  Sum_probs=52.8

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc---hhHHHHHHhCCCc----E-EEeCCCHHHHH
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---SKKEEALSLLGAD----K-FVVSSDLEQMK  239 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~---~~~~~~~~~~g~~----~-~v~~~~~~~~~  239 (344)
                      ..++.....--.+.+++|+|+|+.+.+++..+...|+ +|+++.|++   ++.+.+.+.++..    . +....+.+.+.
T Consensus       112 ~~~l~~~~~~~~~k~vlvlGaGGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~~~~~~l~  191 (288)
T PRK12749        112 IRAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFA  191 (288)
T ss_pred             HHHHHhcCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEechhhhhhhh
Confidence            3344433322366799999999889887777777898 899999985   3555554555421    1 11111111122


Q ss_pred             HhcCCccEEEECCCC
Q 019199          240 ALGKSLDFIIDTASG  254 (344)
Q Consensus       240 ~~~~~~dvvid~~g~  254 (344)
                      +...++|++++++.-
T Consensus       192 ~~~~~aDivINaTp~  206 (288)
T PRK12749        192 EALASADILTNGTKV  206 (288)
T ss_pred             hhcccCCEEEECCCC
Confidence            233579999998853

>PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed

Probab=96.68  E-value=0.023  Score=47.52  Aligned_cols=97  Identities=21%  Similarity=0.273  Sum_probs=61.4

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HhCCCcE-EEeCCCHHHHHHhcCCccEEEE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEAL---SLLGADK-FVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~---~~~g~~~-~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ..++++.+||-+|+|. |..++.+++.. +++|+.++.+++..+.++   ++.+.+. -+...+...... .+.+|+|+-
T Consensus        41 ~~l~~g~~VLDiGcGt-G~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~i~~~~~d~~~~~~-~~~fDlV~~  118 (187)
T PRK00107         41 PYLPGGERVLDVGSGA-GFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKNVTVVHGRAEEFGQ-EEKFDVVTS  118 (187)
T ss_pred             hhcCCCCeEEEEcCCC-CHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCCEEEEeccHhhCCC-CCCccEEEE
Confidence            3445689999999863 56666666544 569999999987665442   2344322 111122222211 357999986


Q ss_pred             CCCC--chhHHHHHHhcccCCEEEEE
Q 019199          251 TASG--DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~--~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ....  ...+..+.+.|+|+|+++.+
T Consensus       119 ~~~~~~~~~l~~~~~~LkpGG~lv~~  144 (187)
T PRK00107        119 RAVASLSDLVELCLPLLKPGGRFLAL  144 (187)
T ss_pred             ccccCHHHHHHHHHHhcCCCeEEEEE
Confidence            4322  24477888999999999977

>PRK09072 short chain dehydrogenase; Provisional

Probab=96.68  E-value=0.044  Score=48.26  Aligned_cols=75  Identities=17%  Similarity=0.215  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--CCc-E--EEeCCCHHHHHHh------cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-K--FVVSSDLEQMKAL------GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--~v~~~~~~~~~~~------~~~~dv  247 (344)
                      ++.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++  +.. .  ..|..+.+.+.+.      .+++|+
T Consensus         4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~id~   83 (263)
T PRK09072          4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARAREMGGINV   83 (263)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHhcCCCCE
Confidence            4678999987 99999999998889999999999988776664442  211 1  2244444433221      257899


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++.+.|.
T Consensus        84 lv~~ag~   90 (263)
T PRK09072         84 LINNAGV   90 (263)
T ss_pred             EEECCCC
Confidence            9998874

>TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase

Probab=96.66  E-value=0.017  Score=50.92  Aligned_cols=74  Identities=27%  Similarity=0.212  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHH----h---cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKA----L---GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~----~---~~~~dvv  248 (344)
                      .+.+++|+|+ |++|.+.++.+...|++|++++++.++.+.+.+..+..   ...|..+.+.+.+    .   .+++|++
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   83 (262)
T TIGR03325         4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL   83 (262)
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999998 99999999999889999999999888776664444422   1234444433222    1   2578999


Q ss_pred             EECCC
Q 019199          249 IDTAS  253 (344)
Q Consensus       249 id~~g  253 (344)
                      +++.|
T Consensus        84 i~~Ag   88 (262)
T TIGR03325        84 IPNAG   88 (262)
T ss_pred             EECCC
Confidence            99886

Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase.

>PRK06500 short chain dehydrogenase; Provisional

Probab=96.66  E-value=0.015  Score=50.57  Aligned_cols=75  Identities=24%  Similarity=0.199  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHH-------hcCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKA-------LGKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~-------~~~~~dvv  248 (344)
                      ++.+++|+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...   ..|..+.+.+..       ..+++|++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (249)
T PRK06500          5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAFGRLDAV   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            4678999998 999999999999999999999998877766656666432   124344333221       12579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |.+.|.
T Consensus        85 i~~ag~   90 (249)
T PRK06500         85 FINAGV   90 (249)
T ss_pred             EECCCC
Confidence            998874

>PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.66  E-value=0.019  Score=50.95  Aligned_cols=95  Identities=18%  Similarity=0.184  Sum_probs=72.1

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+.....--.|.+|+|+|. +.+|.-+..++...|++|++..+....+                     
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~t~~l---------------------  195 (285)
T PRK14189        137 FRPCTPYGVMKMLESIGIPLRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSKTRDL---------------------  195 (285)
T ss_pred             CcCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCCCCCH---------------------
Confidence            467776666666666665468999999998 5669999999999999999865443222                     


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+.+|+++-++|.+..+..  +.++++..++++|..
T Consensus       196 ~~~~~~ADIVV~avG~~~~i~~--~~ik~gavVIDVGin  232 (285)
T PRK14189        196 AAHTRQADIVVAAVGKRNVLTA--DMVKPGATVIDVGMN  232 (285)
T ss_pred             HHHhhhCCEEEEcCCCcCccCH--HHcCCCCEEEEcccc
Confidence            2233569999999998874443  889999999999865

>PRK08159 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.66  E-value=0.061  Score=47.82  Aligned_cols=75  Identities=20%  Similarity=0.231  Sum_probs=50.7

Q ss_pred             CCCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGAD--KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+   +++|++.++.+...|++|+++.+++   ++.+.+.++++..  ...|-.+++.+.++       -+
T Consensus         8 ~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   87 (272)
T PRK08159          8 MAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKWG   87 (272)
T ss_pred             ccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhcC
Confidence            45678999986   5899999999888999998887653   3444444455532  22344554443322       25


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|+++++.|
T Consensus        88 ~iD~lv~nAG   97 (272)
T PRK08159         88 KLDFVVHAIG   97 (272)
T ss_pred             CCcEEEECCc
Confidence            7899999886

>PRK08085 gluconate 5-dehydrogenase; Provisional

Probab=96.65  E-value=0.056  Score=47.32  Aligned_cols=75  Identities=19%  Similarity=0.295  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++   +...   ..|-.+.+.+.+.       .+++
T Consensus         8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   87 (254)
T PRK08085          8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI   87 (254)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999998 99999999999889999999999877665443332   3221   2344444433322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        88 d~vi~~ag~   96 (254)
T PRK08085         88 DVLINNAGI   96 (254)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK04457 spermidine synthase; Provisional

Probab=96.63  E-value=0.049  Score=48.18  Aligned_cols=95  Identities=21%  Similarity=0.272  Sum_probs=66.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCC----c--EEEeCCCHHHHHHhcCCccEEE-E
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGA----D--KFVVSSDLEQMKALGKSLDFII-D  250 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~----~--~~v~~~~~~~~~~~~~~~dvvi-d  250 (344)
                      .+..+||++|+|+ |..+..+++.. +.+|++++.+++-.+.+++.++.    .  .++..+..+.+......+|+++ |
T Consensus        65 ~~~~~vL~IG~G~-G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~Da~~~l~~~~~~yD~I~~D  143 (262)
T PRK04457         65 PRPQHILQIGLGG-GSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEADGAEYIAVHRHSTDVILVD  143 (262)
T ss_pred             CCCCEEEEECCCH-hHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEECCHHHHHHhCCCCCCEEEEe
Confidence            4567899999864 77777777776 45999999999988888665552    1  2333333445555456799986 4


Q ss_pred             CCCC---------chhHHHHHHhcccCCEEEEE
Q 019199          251 TASG---------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~---------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ....         ...++.+.+.|+|+|.++.-
T Consensus       144 ~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvin  176 (262)
T PRK04457        144 GFDGEGIIDALCTQPFFDDCRNALSSDGIFVVN  176 (262)
T ss_pred             CCCCCCCccccCcHHHHHHHHHhcCCCcEEEEE
Confidence            4221         24478888999999999864

>PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated

Probab=96.62  E-value=0.018  Score=54.23  Aligned_cols=75  Identities=20%  Similarity=0.206  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--C-cEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--A-DKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~-~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      .|.+++|+|+ |++|.+.+..+...|++|+++++++++.+...+..+  . ....|..+.+.+.+.-+++|++|++.|.
T Consensus       177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~~~v~~~l~~IDiLInnAGi  255 (406)
T PRK07424        177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQEAALAELLEKVDILIINHGI  255 (406)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCHHHHHHHhCCCCEEEECCCc
Confidence            4678999998 999999999888899999999988776543322211  1 1223556666665555789999998764

>PRK13394 3-hydroxybutyrate dehydrogenase; Provisional

Probab=96.61  E-value=0.044  Score=48.11  Aligned_cols=75  Identities=17%  Similarity=0.177  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF---VVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |.+|..++..+...|++|+++++++++.+.+.+.   .+....   .|..+.+.+.+.       .+++
T Consensus         6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   85 (262)
T PRK13394          6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV   85 (262)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999999999999999988765444333   343322   244444443322       2568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        86 d~vi~~ag~   94 (262)
T PRK13394         86 DILVSNAGI   94 (262)
T ss_pred             CEEEECCcc
Confidence            999998874

>PRK08263 short chain dehydrogenase; Provisional

Probab=96.61  E-value=0.066  Score=47.56  Aligned_cols=74  Identities=18%  Similarity=0.129  Sum_probs=52.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      +.++||+|+ |++|..+++.+...|++|++++++.++++.+.+..+...   ..|..+.+.+.+.       .+++|+++
T Consensus         3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi   82 (275)
T PRK08263          3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV   82 (275)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            457999997 999999999888889999999999887766644444221   2344444433221       25789999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      .+.|.
T Consensus        83 ~~ag~   87 (275)
T PRK08263         83 NNAGY   87 (275)
T ss_pred             ECCCC
Confidence            99874

>PRK05866 short chain dehydrogenase; Provisional

Probab=96.58  E-value=0.01  Score=53.38  Aligned_cols=75  Identities=24%  Similarity=0.319  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.+++|+|+ |++|.+.++.+...|++|++++++.++.+.+.+++   +.+.   ..|-.+.+.+.+.       .+++
T Consensus        39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i  118 (293)
T PRK05866         39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV  118 (293)
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999998 99999999988888999999999987765553332   3221   2344454433322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus       119 d~li~~AG~  127 (293)
T PRK05866        119 DILINNAGR  127 (293)
T ss_pred             CEEEECCCC
Confidence            999999874

>PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.57  E-value=0.026  Score=50.06  Aligned_cols=95  Identities=17%  Similarity=0.128  Sum_probs=73.1

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      ..||+....+..+.....--.|.+++|+|- ..+|.-+.+++...|+.|++..+....+                     
T Consensus       138 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~~l---------------------  196 (285)
T PRK10792        138 LRPCTPRGIMTLLERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTKNL---------------------  196 (285)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCCCH---------------------
Confidence            467777677777766655457999999997 5699999999999999999987653322                     


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++..+.+|+++.++|.+..+..  +.++++..++++|..
T Consensus       197 ~~~~~~ADIvi~avG~p~~v~~--~~vk~gavVIDvGin  233 (285)
T PRK10792        197 RHHVRNADLLVVAVGKPGFIPG--EWIKPGAIVIDVGIN  233 (285)
T ss_pred             HHHHhhCCEEEEcCCCcccccH--HHcCCCcEEEEcccc
Confidence            2233569999999998874433  789999999999854

>PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1

Probab=96.57  E-value=0.006  Score=50.14  Aligned_cols=96  Identities=20%  Similarity=0.245  Sum_probs=65.5

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC------------------CC--HHHHHH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS------------------SD--LEQMKA  240 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~------------------~~--~~~~~~  240 (344)
                      .-+|+|+|+|.+|+.|+.+++.+|++|++.+...++.+.. +..++..+...                  ..  .....+
T Consensus        20 p~~vvv~G~G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~-~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~   98 (168)
T PF01262_consen   20 PAKVVVTGAGRVGQGAAEIAKGLGAEVVVPDERPERLRQL-ESLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE   98 (168)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHTT-EEEEEESSHHHHHHH-HHTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred             CeEEEEECCCHHHHHHHHHHhHCCCEEEeccCCHHHHHhh-hcccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence            3778999999999999999999999999999999888777 56665544331                  01  112222


Q ss_pred             hcCCccEEEECCC--C---c-hhHHHHHHhcccCCEEEEEcCC
Q 019199          241 LGKSLDFIIDTAS--G---D-HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       241 ~~~~~dvvid~~g--~---~-~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ....+|++|.+.-  +   + ...+..++.|+++..|+++...
T Consensus        99 ~i~~~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D  141 (168)
T PF01262_consen   99 FIAPADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCD  141 (168)
T ss_dssp             HHHH-SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGG
T ss_pred             HHhhCcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEec
Confidence            3356899885331  1   1 1246778889999889888644

4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A ....

>PRK07062 short chain dehydrogenase; Provisional

Probab=96.56  E-value=0.016  Score=51.18  Aligned_cols=75  Identities=19%  Similarity=0.209  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CC-c---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GA-D---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~-~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++    +. .   ...|..+.+.+.+.       .+
T Consensus         7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   86 (265)
T PRK07062          7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG   86 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 89999999999999999999999887765443322    21 1   12355555443322       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        87 ~id~li~~Ag~   97 (265)
T PRK07062         87 GVDMLVNNAGQ   97 (265)
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>PRK12550 shikimate 5-dehydrogenase; Reviewed

Probab=96.56  E-value=0.021  Score=50.75  Aligned_cols=77  Identities=13%  Similarity=0.265  Sum_probs=55.0

Q ss_pred             hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d  246 (344)
                      ...++..... ..+.+++|+|+|+.+.+++..++..|+ +|+++.|+.++.+.+.+.++...    .  +..  ....+|
T Consensus       110 f~~~L~~~~~-~~~~~vlilGaGGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~~----~--~~~--~~~~~d  180 (272)
T PRK12550        110 IAKLLASYQV-PPDLVVALRGSGGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYEW----R--PDL--GGIEAD  180 (272)
T ss_pred             HHHHHHhcCC-CCCCeEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCcc----h--hhc--ccccCC
Confidence            3445554433 456789999999999999999999998 79999999998877766664221    1  011  124589


Q ss_pred             EEEECCC
Q 019199          247 FIIDTAS  253 (344)
Q Consensus       247 vvid~~g  253 (344)
                      ++++|+.
T Consensus       181 lvINaTp  187 (272)
T PRK12550        181 ILVNVTP  187 (272)
T ss_pred             EEEECCc
Confidence            9999886

>PRK08594 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.55  E-value=0.088  Score=46.33  Aligned_cols=98  Identities=13%  Similarity=0.113  Sum_probs=62.7

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhC-CCc---EEEeCCCHHHHHH----h---c
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLL-GAD---KFVVSSDLEQMKA----L---G  242 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~-g~~---~~v~~~~~~~~~~----~---~  242 (344)
                      .|.+++|+|+   +++|.++++.+...|++|++++++.   ++++.+.++. +..   ...|-.+.+.+.+    +   -
T Consensus         6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~   85 (257)
T PRK08594          6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV   85 (257)
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence            4678999986   5999999888888999999886543   3455554444 221   1234555443322    1   2


Q ss_pred             CCccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          243 KSLDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       243 ~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++|+++++.|...                             ..+.++..++++|+|+.++..
T Consensus        86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~  149 (257)
T PRK08594         86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYL  149 (257)
T ss_pred             CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEccc
Confidence            67999998876310                             012344456677999988765

>PRK06079 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.075  Score=46.59  Aligned_cols=74  Identities=16%  Similarity=0.111  Sum_probs=48.5

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-c---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-D---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Gag---~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .|++++|+|++   ++|.+.++.+...|++|+++.++++..+.+ +++.. .   ..+|-.+.+.+.+.       .+.+
T Consensus         6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   84 (252)
T PRK06079          6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSL-QKLVDEEDLLVECDVASDESIERAFATIKERVGKI   84 (252)
T ss_pred             CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHH-HhhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence            46889999873   899999998888999999998874322333 33321 1   12344444433321       2679


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        85 D~lv~nAg~   93 (252)
T PRK06079         85 DGIVHAIAY   93 (252)
T ss_pred             CEEEEcccc
Confidence            999998873

>PRK07533 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.54  E-value=0.076  Score=46.74  Aligned_cols=75  Identities=21%  Similarity=0.252  Sum_probs=49.9

Q ss_pred             CCCEEEEECCC---hHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHhCCCcEE--EeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGLG---GLGHMAVKFGKAFGLNVTVLSTSTSK---KEEALSLLGADKF--VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Gag---~~G~~ai~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|++   ++|.+.++.+...|++|++++++++.   .+.+.++++....  .|-.+.+.+.+.       -++
T Consensus         9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   88 (258)
T PRK07533          9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR   88 (258)
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence            47889999863   89999999888899999998887543   2333334443222  344444433322       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        89 ld~lv~nAg~   98 (258)
T PRK07533         89 LDFLLHSIAF   98 (258)
T ss_pred             CCEEEEcCcc
Confidence            9999998873

>COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only]

Probab=96.51  E-value=0.032  Score=50.82  Aligned_cols=118  Identities=25%  Similarity=0.303  Sum_probs=81.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE-CCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID-TASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid-~~g~~~~  257 (344)
                      -.|.++-|+|.|.+|++.++.++.+|.+|...++... .+.. ++.++..+    +   ++++-...|++.- +..++.+
T Consensus       144 l~gktvGIiG~GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~-~~~~~~y~----~---l~ell~~sDii~l~~Plt~~T  214 (324)
T COG1052         144 LRGKTLGIIGLGRIGQAVARRLKGFGMKVLYYDRSPN-PEAE-KELGARYV----D---LDELLAESDIISLHCPLTPET  214 (324)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCCC-hHHH-hhcCceec----c---HHHHHHhCCEEEEeCCCChHH
Confidence            3589999999999999999999999999999998876 2222 35554432    1   2333455888765 4445543


Q ss_pred             H----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeCcc
Q 019199          258 F----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPIEN  318 (344)
Q Consensus       258 ~----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~  318 (344)
                      .    ...++.|++++.+|.++-..-             -+-+.+++.+++|++..- ..+|-.|.
T Consensus       215 ~hLin~~~l~~mk~ga~lVNtaRG~~-------------VDe~ALi~AL~~g~i~gaglDV~e~Ep  267 (324)
T COG1052         215 RHLINAEELAKMKPGAILVNTARGGL-------------VDEQALIDALKSGKIAGAGLDVFENEP  267 (324)
T ss_pred             hhhcCHHHHHhCCCCeEEEECCCccc-------------cCHHHHHHHHHhCCcceEEeeecCCCC
Confidence            2    366788999999998863321             235688888999988643 35554443

>COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism]

Probab=96.50  E-value=0.032  Score=48.24  Aligned_cols=99  Identities=25%  Similarity=0.291  Sum_probs=70.7

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---c-EEEeCCCHHHHHHhcCCccEEEECC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---D-KFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---~-~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      ..+|++||-+|+| .|-.+..+++..|- +|+++|-+++.++.++++...   . .-+...+.+.+.-....||++.-+.
T Consensus        49 ~~~g~~vLDva~G-TGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~i~fv~~dAe~LPf~D~sFD~vt~~f  127 (238)
T COG2226          49 IKPGDKVLDVACG-TGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQNVEFVVGDAENLPFPDNSFDAVTISF  127 (238)
T ss_pred             CCCCCEEEEecCC-ccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccceEEEEechhhCCCCCCccCEEEeee
Confidence            3589999999876 48899999998875 999999999999888666542   1 1111222222221135688886655


Q ss_pred             CC------chhHHHHHHhcccCCEEEEEcCC
Q 019199          253 SG------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       253 g~------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |-      +..++++.+.|+|+|+++.+.+.
T Consensus       128 glrnv~d~~~aL~E~~RVlKpgG~~~vle~~  158 (238)
T COG2226         128 GLRNVTDIDKALKEMYRVLKPGGRLLVLEFS  158 (238)
T ss_pred             hhhcCCCHHHHHHHHHHhhcCCeEEEEEEcC
Confidence            52      34588999999999999988766

>PRK07063 short chain dehydrogenase; Provisional

Probab=96.50  E-value=0.017  Score=50.75  Aligned_cols=75  Identities=23%  Similarity=0.216  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||.|+ |++|.+++..+...|++|+++++++++.+.+.+++     +..   ...|..+++.+.+.       .+
T Consensus         6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g   85 (260)
T PRK07063          6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG   85 (260)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            4678999998 99999999999899999999999887765553332     221   12244444433322       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        86 ~id~li~~ag~   96 (260)
T PRK07063         86 PLDVLVNNAGI   96 (260)
T ss_pred             CCcEEEECCCc
Confidence            79999998873

>PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.49  E-value=0.037  Score=49.11  Aligned_cols=95  Identities=17%  Similarity=0.159  Sum_probs=71.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......|.....--.|.+|+|+|.| .+|.-++.++...|+.|++.......+                     
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~t~~l---------------------  194 (285)
T PRK14191        136 FVPATPMGVMRLLKHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHILTKDL---------------------  194 (285)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCCcHHH---------------------
Confidence            4677766666666655543579999999985 999999999999999999886543322                     


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+.+|+++-++|.+..+.  -+.++++..++++|..
T Consensus       195 ~~~~~~ADIvV~AvG~p~~i~--~~~vk~GavVIDvGi~  231 (285)
T PRK14191        195 SFYTQNADIVCVGVGKPDLIK--ASMVKKGAVVVDIGIN  231 (285)
T ss_pred             HHHHHhCCEEEEecCCCCcCC--HHHcCCCcEEEEeecc
Confidence            222356999999999887333  4578999999999864

>PRK06196 oxidoreductase; Provisional

Probab=96.49  E-value=0.018  Score=52.32  Aligned_cols=75  Identities=28%  Similarity=0.386  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-Cc-EEEeCCCHHHHHHh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-AD-KFVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      .+.++||+|+ |++|.+++..+...|++|++++++.++.+.+.+++. .. ...|-.+.+.+.+.       .+++|++|
T Consensus        25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li  104 (315)
T PRK06196         25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI  104 (315)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence            4678999998 999999999888899999999999887665544432 21 12344555443332       25799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus       105 ~nAg~  109 (315)
T PRK06196        105 NNAGV  109 (315)
T ss_pred             ECCCC
Confidence            98873

>PRK07574 formate dehydrogenase; Provisional

Probab=96.48  E-value=0.051  Score=50.70  Aligned_cols=109  Identities=15%  Similarity=0.166  Sum_probs=73.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF-  258 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~-  258 (344)
                      .|.+|.|+|.|.+|...++.++.+|.+|++.++.....+.. +.+|...   ..+   ++++....|+|+.+....... 
T Consensus       191 ~gktVGIvG~G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~-~~~g~~~---~~~---l~ell~~aDvV~l~lPlt~~T~  263 (385)
T PRK07574        191 EGMTVGIVGAGRIGLAVLRRLKPFDVKLHYTDRHRLPEEVE-QELGLTY---HVS---FDSLVSVCDVVTIHCPLHPETE  263 (385)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCchhhH-hhcCcee---cCC---HHHHhhcCCEEEEcCCCCHHHH
Confidence            57889999999999999999999999999999875333322 3455321   112   334446689998877743212 


Q ss_pred             ----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          259 ----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       259 ----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                          ...+..|+++..+|.++-..-             -+-+.+++.+.+|++.
T Consensus       264 ~li~~~~l~~mk~ga~lIN~aRG~i-------------VDe~AL~~AL~sG~i~  304 (385)
T PRK07574        264 HLFDADVLSRMKRGSYLVNTARGKI-------------VDRDAVVRALESGHLA  304 (385)
T ss_pred             HHhCHHHHhcCCCCcEEEECCCCch-------------hhHHHHHHHHHhCCcc
Confidence                346778899988888763311             1234566666666663

>PRK05854 short chain dehydrogenase; Provisional

Probab=96.48  E-value=0.016  Score=52.66  Aligned_cols=75  Identities=28%  Similarity=0.348  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----C-Cc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----G-AD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g-~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .|.+++|+|+ +++|.+++..+...|++|++++++.++.+.+.+++    + ..   ..+|-.+.+.+++.       .+
T Consensus        13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~~   92 (313)
T PRK05854         13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEGR   92 (313)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4678999998 99999999988889999999999987765543332    2 11   12355555444332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus        93 ~iD~li~nAG~  103 (313)
T PRK05854         93 PIHLLINNAGV  103 (313)
T ss_pred             CccEEEECCcc
Confidence            78999998873

>PRK07831 short chain dehydrogenase; Provisional

Probab=96.46  E-value=0.03  Score=49.35  Aligned_cols=76  Identities=22%  Similarity=0.275  Sum_probs=53.5

Q ss_pred             CCCCEEEEECC-C-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcEE----EeCCCHHHHHHh-------
Q 019199          179 QPGKSLGVIGL-G-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADKF----VVSSDLEQMKAL-------  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~~----v~~~~~~~~~~~-------  241 (344)
                      ..+.++||+|+ | ++|.++++.+...|++|+++++++++++...++    +|...+    .|..+.+.+.+.       
T Consensus        15 ~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~   94 (262)
T PRK07831         15 LAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVER   94 (262)
T ss_pred             cCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHHH
Confidence            45789999987 6 799999999999999999999887766544322    443222    244554433322       


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                      .+++|++|++.|.
T Consensus        95 ~g~id~li~~ag~  107 (262)
T PRK07831         95 LGRLDVLVNNAGL  107 (262)
T ss_pred             cCCCCEEEECCCC
Confidence            2578999999984

>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.46  E-value=0.022  Score=50.94  Aligned_cols=95  Identities=21%  Similarity=0.203  Sum_probs=72.5

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+...+.--.|.+|.|+|. +.+|.-.+.++...|++|++..+.....+                    
T Consensus       138 ~~PcTp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~gatVtv~~~~t~~l~--------------------  197 (301)
T PRK14194        138 LTPCTPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAHCSVTVVHSRSTDAK--------------------  197 (301)
T ss_pred             CCCCcHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEECCCCCCHH--------------------
Confidence            467776666666666555468999999998 59999999999999999999876543222                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+..|+|+-++|.+..+...+  ++++..++++|..
T Consensus       198 -e~~~~ADIVIsavg~~~~v~~~~--ik~GaiVIDvgin  233 (301)
T PRK14194        198 -ALCRQADIVVAAVGRPRLIDADW--LKPGAVVIDVGIN  233 (301)
T ss_pred             -HHHhcCCEEEEecCChhcccHhh--ccCCcEEEEeccc
Confidence             22345899999999887666554  8999999999855

>PRK06128 oxidoreductase; Provisional

Probab=96.45  E-value=0.12  Score=46.62  Aligned_cols=98  Identities=15%  Similarity=0.142  Sum_probs=61.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHH---HHHhCCCcEE---EeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEE---ALSLLGADKF---VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~---~~~~~g~~~~---v~~~~~~~~~~~-------~~  243 (344)
                      .|.++||+|+ |++|.+++..+...|++|+++.++.+.  .+.   ..+..|....   .|-.+.+.+.+.       .+
T Consensus        54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  133 (300)
T PRK06128         54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQAEGRKAVALPGDLKDEAFCRQLVERAVKELG  133 (300)
T ss_pred             CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHHHHHHHHhC
Confidence            4678999998 999999999998899999887654331  111   1233453222   244454433322       25


Q ss_pred             CccEEEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|++|++.|..                          ...+.++..++++|+++.++..
T Consensus       134 ~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~  193 (300)
T PRK06128        134 GLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSI  193 (300)
T ss_pred             CCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCc
Confidence            799999988731                          0123344445677899988654

>cd05212 NAD_bind_m-THF_DH_Cyclohyd_like NAD(P) binding domain of methylene-tetrahydrofolate dehydrogenase and methylene-tetrahydrofolate dehydrogenase/cyclohydrolase

Probab=96.44  E-value=0.058  Score=42.74  Aligned_cols=95  Identities=13%  Similarity=0.048  Sum_probs=70.4

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .++|........++..+.--.|.+++|+|. ..+|.-++.++...|++|+.+.+....++++                  
T Consensus         7 ~~p~t~~a~~~ll~~~~~~~~gk~v~VvGrs~~vG~pla~lL~~~gatV~~~~~~t~~l~~~------------------   68 (140)
T cd05212           7 FVSPVAKAVKELLNKEGVRLDGKKVLVVGRSGIVGAPLQCLLQRDGATVYSCDWKTIQLQSK------------------   68 (140)
T ss_pred             ccccHHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeCCCCcCHHHH------------------
Confidence            456665555655665554468999999997 8999999999999999999998655433222                  


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         .+.+|+++-++|.+..+.  -+.++++..++.+|..
T Consensus        69 ---v~~ADIVvsAtg~~~~i~--~~~ikpGa~Vidvg~~  102 (140)
T cd05212          69 ---VHDADVVVVGSPKPEKVP--TEWIKPGATVINCSPT  102 (140)
T ss_pred             ---HhhCCEEEEecCCCCccC--HHHcCCCCEEEEcCCC
Confidence               245899999998876333  4568999999988755

NAD(P) binding domains of methylene-tetrahydrofolate dehydrogenase (m-THF DH) and m-THF DH/cyclohydrolase bifunctional enzymes (m-THF DH/cyclohydrolase). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional

>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF)

Probab=96.43  E-value=0.037  Score=44.84  Aligned_cols=96  Identities=17%  Similarity=0.239  Sum_probs=63.2

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ..+||+....+..+.....--.|.+++|+|. ..+|.-+..+++..|+.|+......+.++..                 
T Consensus        14 ~~~PcTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~~atVt~~h~~T~~l~~~-----------------   76 (160)
T PF02882_consen   14 GFVPCTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNKGATVTICHSKTKNLQEI-----------------   76 (160)
T ss_dssp             SS--HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHTT-EEEEE-TTSSSHHHH-----------------
T ss_pred             CCcCCCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhCCCeEEeccCCCCcccce-----------------
Confidence            4567776666777766665578999999997 7899999999999999999988776544433                 


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                          .+.+|+++.++|.+..+.  -+.++++..++++|..
T Consensus        77 ----~~~ADIVVsa~G~~~~i~--~~~ik~gavVIDvG~~  110 (160)
T PF02882_consen   77 ----TRRADIVVSAVGKPNLIK--ADWIKPGAVVIDVGIN  110 (160)
T ss_dssp             ----HTTSSEEEE-SSSTT-B---GGGS-TTEEEEE--CE
T ss_pred             ----eeeccEEeeeeccccccc--cccccCCcEEEecCCc
Confidence                144888898888876332  3468888888888765

Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....

>PRK07814 short chain dehydrogenase; Provisional

Probab=96.43  E-value=0.022  Score=50.31  Aligned_cols=76  Identities=20%  Similarity=0.222  Sum_probs=53.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc-E--EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-K--FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~--~v~~~~~~~~~~~-------~~~  244 (344)
                      -++.++||+|+ |++|...++.+...|++|+++++++++.+.+.+.+   +.. .  ..|..+.+.+.+.       .++
T Consensus         8 ~~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   87 (263)
T PRK07814          8 LDDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGR   87 (263)
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            35788999998 89999999999889999999999887665543332   322 1  2355555544322       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        88 id~vi~~Ag~   97 (263)
T PRK07814         88 LDIVVNNVGG   97 (263)
T ss_pred             CCEEEECCCC
Confidence            9999998873

>PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=96.42  E-value=0.03  Score=48.78  Aligned_cols=74  Identities=24%  Similarity=0.313  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      ++.++||+|+ |++|+.+++.+...|++|++++++.++.+.+.++   .+..   ...|-.+.+.+.+.       .+++
T Consensus         4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (253)
T PRK08217          4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL   83 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999998 9999999999988999999999987765544332   2432   22344444433221       2568


Q ss_pred             cEEEECCC
Q 019199          246 DFIIDTAS  253 (344)
Q Consensus       246 dvvid~~g  253 (344)
                      |++|.+.|
T Consensus        84 d~vi~~ag   91 (253)
T PRK08217         84 NGLINNAG   91 (253)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK05867 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.021  Score=50.00  Aligned_cols=75  Identities=17%  Similarity=0.173  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .|.++||+|+ +++|.+.+..+...|++|++++++.++.+.+.+++   +..   ...|..+++.+.+.       .+++
T Consensus         8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T PRK05867          8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI   87 (253)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4788999998 99999999999999999999999887765553332   322   12344555443322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        88 d~lv~~ag~   96 (253)
T PRK05867         88 DIAVCNAGI   96 (253)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK05876 short chain dehydrogenase; Provisional

Probab=96.41  E-value=0.02  Score=50.96  Aligned_cols=75  Identities=20%  Similarity=0.211  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .|.++||+|+ |++|.+.+..+...|++|++++++.++++.+.+++   |...   ..|-.+.+.+.+.       .+++
T Consensus         5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   84 (275)
T PRK05876          5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV   84 (275)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999889999999998877665543332   3322   2344555443322       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        85 d~li~nAg~   93 (275)
T PRK05876         85 DVVFSNAGI   93 (275)
T ss_pred             CEEEECCCc
Confidence            999998873

>PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences

Probab=96.41  E-value=0.0053  Score=54.97  Aligned_cols=124  Identities=23%  Similarity=0.303  Sum_probs=69.2

Q ss_pred             cceEEEcCCCCCcccccccchhhhHh--HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199          143 ERYCYKIANDYPLALAAPLLCAGITV--YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE  219 (344)
Q Consensus       143 ~~~~~~~P~~~~~~~aa~l~~~~~ta--~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~  219 (344)
                      ...++.+.+++.+-...    ..+|.  ...|.+.  ..+|++||-+|+|+ |..++..++ +|+ +|++++-++.-.+.
T Consensus       128 ~~~~I~idPg~AFGTG~----H~TT~lcl~~l~~~--~~~g~~vLDvG~GS-GILaiaA~k-lGA~~v~a~DiDp~Av~~  199 (295)
T PF06325_consen  128 DEIVIEIDPGMAFGTGH----HPTTRLCLELLEKY--VKPGKRVLDVGCGS-GILAIAAAK-LGAKKVVAIDIDPLAVEA  199 (295)
T ss_dssp             TSEEEEESTTSSS-SSH----CHHHHHHHHHHHHH--SSTTSEEEEES-TT-SHHHHHHHH-TTBSEEEEEESSCHHHHH
T ss_pred             CcEEEEECCCCcccCCC----CHHHHHHHHHHHHh--ccCCCEEEEeCCcH-HHHHHHHHH-cCCCeEEEecCCHHHHHH
Confidence            44567777666655443    22222  3334433  37889999999753 555555555 588 89999988775444


Q ss_pred             HHH---hCCC-cEEEeCCCHHHHHHhcCCccEEEECCCCch---hHHHHHHhcccCCEEEEEcCC
Q 019199          220 ALS---LLGA-DKFVVSSDLEQMKALGKSLDFIIDTASGDH---PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       220 ~~~---~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++   .-|. +.+.-....+   ....+||+|+-+.-...   ....+.+.++++|++++.|..
T Consensus       200 a~~N~~~N~~~~~~~v~~~~~---~~~~~~dlvvANI~~~vL~~l~~~~~~~l~~~G~lIlSGIl  261 (295)
T PF06325_consen  200 ARENAELNGVEDRIEVSLSED---LVEGKFDLVVANILADVLLELAPDIASLLKPGGYLILSGIL  261 (295)
T ss_dssp             HHHHHHHTT-TTCEEESCTSC---TCCS-EEEEEEES-HHHHHHHHHHCHHHEEEEEEEEEEEEE
T ss_pred             HHHHHHHcCCCeeEEEEEecc---cccccCCEEEECCCHHHHHHHHHHHHHhhCCCCEEEEcccc
Confidence            322   2231 2221111111   11267999987665433   134455678999999999865

Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A ....

>TIGR00507 aroE shikimate 5-dehydrogenase

Probab=96.40  E-value=0.026  Score=50.17  Aligned_cols=104  Identities=18%  Similarity=0.119  Sum_probs=66.0

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCc
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~  245 (344)
                      ..++.+......+.+++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.+..   ...+...   .  ....++
T Consensus       105 ~~~l~~~~~~~~~k~vliiGaGg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~~~~---~--~~~~~~  179 (270)
T TIGR00507       105 VSDLERLIPLRPNQRVLIIGAGGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAFSMD---E--LPLHRV  179 (270)
T ss_pred             HHHHHhcCCCccCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEechh---h--hcccCc
Confidence            3344433332457889999999999999988888899999999998877666555432   1222111   1  112469


Q ss_pred             cEEEECCCCch--hH---HHHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASGDH--PF---DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~~--~~---~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+++++++...  ..   ......++++..++++...
T Consensus       180 DivInatp~gm~~~~~~~~~~~~~l~~~~~v~D~~y~  216 (270)
T TIGR00507       180 DLIINATSAGMSGNIDEPPVPAEKLKEGMVVYDMVYN  216 (270)
T ss_pred             cEEEECCCCCCCCCCCCCCCCHHHcCCCCEEEEeccC
Confidence            99999998531  01   1123456777777777443

This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain.

>PRK09291 short chain dehydrogenase; Provisional

Probab=96.40  E-value=0.025  Score=49.58  Aligned_cols=73  Identities=15%  Similarity=0.109  Sum_probs=52.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHHh-cCCccEEEECC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKAL-GKSLDFIIDTA  252 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~~-~~~~dvvid~~  252 (344)
                      +.++||+|+ |++|..+++.+...|++|+++++++++...+.+   ..+..   ...|..+.+.+.+. ..++|++|.+.
T Consensus         2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~id~vi~~a   81 (257)
T PRK09291          2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDAIDRAQAAEWDVDVLLNNA   81 (257)
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCHHHHHHHhcCCCCEEEECC
Confidence            457999998 999999999999999999999988765544422   22321   22355566555443 35899999988


Q ss_pred             C
Q 019199          253 S  253 (344)
Q Consensus       253 g  253 (344)
                      |
T Consensus        82 g   82 (257)
T PRK09291         82 G   82 (257)
T ss_pred             C
Confidence            7

>COG0569 TrkA K+ transport systems, NAD-binding component [Inorganic ion transport and metabolism]

Probab=96.39  E-value=0.029  Score=48.44  Aligned_cols=82  Identities=21%  Similarity=0.336  Sum_probs=63.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-hCCCcEE-EeCCCHHHHHHhc-CCccEEEECCCCchhHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS-LLGADKF-VVSSDLEQMKALG-KSLDFIIDTASGDHPFD  259 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~-~~g~~~~-v~~~~~~~~~~~~-~~~dvvid~~g~~~~~~  259 (344)
                      .++|+|+|.+|...++.+...|..|++++.++++.+.... +++...+ .+..+++.+++.+ ..+|+++-+++... .+
T Consensus         2 ~iiIiG~G~vG~~va~~L~~~g~~Vv~Id~d~~~~~~~~~~~~~~~~v~gd~t~~~~L~~agi~~aD~vva~t~~d~-~N   80 (225)
T COG0569           2 KIIIIGAGRVGRSVARELSEEGHNVVLIDRDEERVEEFLADELDTHVVIGDATDEDVLEEAGIDDADAVVAATGNDE-VN   80 (225)
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCceEEEEcCHHHHHHHhhhhcceEEEEecCCCHHHHHhcCCCcCCEEEEeeCCCH-HH
Confidence            5788999999999999999999999999999999877423 3554333 3556778888875 88999999999865 55


Q ss_pred             HHHHhc
Q 019199          260 AYMSLL  265 (344)
Q Consensus       260 ~~~~~l  265 (344)
                      ..+-.+
T Consensus        81 ~i~~~l   86 (225)
T COG0569          81 SVLALL   86 (225)
T ss_pred             HHHHHH
Confidence            554444

>PRK06949 short chain dehydrogenase; Provisional

Probab=96.38  E-value=0.023  Score=49.79  Aligned_cols=76  Identities=21%  Similarity=0.279  Sum_probs=53.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC-c--EEEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA-D--KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~--~~v~~~~~~~~~~~-------~~~  244 (344)
                      ..+.+++|+|+ |.+|..++..+...|++|+++++++++++.+...+   +. .  ...|..+.+.+.+.       .++
T Consensus         7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   86 (258)
T PRK06949          7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT   86 (258)
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            45789999998 99999999999989999999999988765553332   21 1  22344444433322       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        87 ~d~li~~ag~   96 (258)
T PRK06949         87 IDILVNNSGV   96 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998883

>PLN03139 formate dehydrogenase; Provisional

Probab=96.37  E-value=0.043  Score=51.20  Aligned_cols=109  Identities=20%  Similarity=0.236  Sum_probs=72.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.++.....+.. ++.|+...   .+   ++++....|+|+.+.......
T Consensus       197 L~gktVGIVG~G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~-~~~g~~~~---~~---l~ell~~sDvV~l~lPlt~~T  269 (386)
T PLN03139        197 LEGKTVGTVGAGRIGRLLLQRLKPFNCNLLYHDRLKMDPELE-KETGAKFE---ED---LDAMLPKCDVVVINTPLTEKT  269 (386)
T ss_pred             CCCCEEEEEeecHHHHHHHHHHHHCCCEEEEECCCCcchhhH-hhcCceec---CC---HHHHHhhCCEEEEeCCCCHHH
Confidence            368899999999999999999999999999988765433333 35554321   12   233335589998877643212


Q ss_pred             -----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          259 -----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       259 -----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                           ...++.|+++..+|.++-..-             -+-+.+++.+.+|++
T Consensus       270 ~~li~~~~l~~mk~ga~lIN~aRG~i-------------VDe~AL~~AL~sG~l  310 (386)
T PLN03139        270 RGMFNKERIAKMKKGVLIVNNARGAI-------------MDTQAVADACSSGHI  310 (386)
T ss_pred             HHHhCHHHHhhCCCCeEEEECCCCch-------------hhHHHHHHHHHcCCc
Confidence                 346778899988888763311             124566666666666

>PRK13243 glyoxylate reductase; Reviewed

Probab=96.36  E-value=0.049  Score=49.96  Aligned_cols=107  Identities=21%  Similarity=0.334  Sum_probs=72.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP--  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~--  257 (344)
                      .|.+|.|+|.|.+|...++.++.+|.+|++.++..+... . +..|..    ..+   +.++....|+|+-++.....  
T Consensus       149 ~gktvgIiG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~-~-~~~~~~----~~~---l~ell~~aDiV~l~lP~t~~T~  219 (333)
T PRK13243        149 YGKTIGIIGFGRIGQAVARRAKGFGMRILYYSRTRKPEA-E-KELGAE----YRP---LEELLRESDFVSLHVPLTKETY  219 (333)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCChhh-H-HHcCCE----ecC---HHHHHhhCCEEEEeCCCChHHh
Confidence            678999999999999999999999999999988755432 2 344532    112   22333558999888764321  


Q ss_pred             ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                         -...+..++++..++.++-..-             -+-+.+++.+.+|++.
T Consensus       220 ~~i~~~~~~~mk~ga~lIN~aRg~~-------------vd~~aL~~aL~~g~i~  260 (333)
T PRK13243        220 HMINEERLKLMKPTAILVNTARGKV-------------VDTKALVKALKEGWIA  260 (333)
T ss_pred             hccCHHHHhcCCCCeEEEECcCchh-------------cCHHHHHHHHHcCCeE
Confidence               2366788899998888863311             1235666667777663

>PRK06101 short chain dehydrogenase; Provisional

Probab=96.35  E-value=0.14  Score=44.49  Aligned_cols=72  Identities=17%  Similarity=0.052  Sum_probs=48.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-C-cEEEeCCCHHHHHHh----cCCccEEEECCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-A-DKFVVSSDLEQMKAL----GKSLDFIIDTAS  253 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~-~~~v~~~~~~~~~~~----~~~~dvvid~~g  253 (344)
                      .+++|+|+ |++|...+..+...|++|+++++++++.+.+.+... . -...|-.+.+.+.+.    ..+.|+++.+.|
T Consensus         2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~d~~i~~ag   80 (240)
T PRK06101          2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELHTQSANIFTLAFDVTDHPGTKAALSQLPFIPELWIFNAG   80 (240)
T ss_pred             cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCCCeEEEeeCCCHHHHHHHHHhcccCCCEEEEcCc
Confidence            46889987 999999888888889999999999887766633222 1 123455565544443    234677766654

>PRK05717 oxidoreductase; Validated

Probab=96.35  E-value=0.034  Score=48.75  Aligned_cols=76  Identities=21%  Similarity=0.210  Sum_probs=53.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHH----h---cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKA----L---GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~----~---~~~~dv  247 (344)
                      ..|.++||+|+ |++|..++..+...|++|++++++.++.....++++...   ..|-.+.+.+.+    .   -+++|+
T Consensus         8 ~~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~   87 (255)
T PRK05717          8 HNGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDA   87 (255)
T ss_pred             cCCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            45788999987 999999999988889999999888776655544555321   234445443322    2   256899


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      +|.+.|.
T Consensus        88 li~~ag~   94 (255)
T PRK05717         88 LVCNAAI   94 (255)
T ss_pred             EEECCCc
Confidence            9998874

>PRK07984 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.34  E-value=0.12  Score=45.62  Aligned_cols=74  Identities=16%  Similarity=0.171  Sum_probs=48.0

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGAD--KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ +  ++|.+.++.+...|++|++.++++   +..+.+..+.+..  ...|-.+.+.+.+.       -++
T Consensus         5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   84 (262)
T PRK07984          5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK   84 (262)
T ss_pred             CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence            4678999987 3  799998888888999999887763   2223332222321  22355555444332       256


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|+++++.|
T Consensus        85 iD~linnAg   93 (262)
T PRK07984         85 FDGFVHSIG   93 (262)
T ss_pred             CCEEEECCc
Confidence            899999887

>PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins

Probab=96.34  E-value=0.016  Score=45.06  Aligned_cols=81  Identities=17%  Similarity=0.245  Sum_probs=52.2

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      --+|-|+|+|.+|..+...++..|..|..+... .+..+.+...++...+.+..      +....+|++|-++.... +.
T Consensus        10 ~l~I~iIGaGrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~------~~~~~aDlv~iavpDda-I~   82 (127)
T PF10727_consen   10 RLKIGIIGAGRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLE------EILRDADLVFIAVPDDA-IA   82 (127)
T ss_dssp             --EEEEECTSCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TT------GGGCC-SEEEE-S-CCH-HH
T ss_pred             ccEEEEECCCHHHHHHHHHHHHCCCeEEEEEeCCcccccccccccccccccccc------cccccCCEEEEEechHH-HH
Confidence            356888999999999999999999998877544 44555554555654443322      23467999999999886 88


Q ss_pred             HHHHhcccC
Q 019199          260 AYMSLLKVA  268 (344)
Q Consensus       260 ~~~~~l~~~  268 (344)
                      .+++.|...
T Consensus        83 ~va~~La~~   91 (127)
T PF10727_consen   83 EVAEQLAQY   91 (127)
T ss_dssp             HHHHHHHCC
T ss_pred             HHHHHHHHh
Confidence            888888654

This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A.

>PLN03075 nicotianamine synthase; Provisional

Probab=96.33  E-value=0.044  Score=48.95  Aligned_cols=104  Identities=13%  Similarity=0.158  Sum_probs=68.7

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCC----c--EEEeCCCHHHHHHhc
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGA----D--KFVVSSDLEQMKALG  242 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~----~--~~v~~~~~~~~~~~~  242 (344)
                      .+..... .+.++|+-+|+|..++.++.+++..  +.+++.++.+++..+.+++.+..    .  ..|...+........
T Consensus       115 ~L~~~~~-~~p~~VldIGcGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~Da~~~~~~l  193 (296)
T PLN03075        115 LLSQHVN-GVPTKVAFVGSGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTADVMDVTESL  193 (296)
T ss_pred             HHHHhhc-CCCCEEEEECCCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEECchhhccccc
Confidence            3434444 4778999999999999888888655  34899999999988777554422    1  111112211111113


Q ss_pred             CCccEEEECC-------CCchhHHHHHHhcccCCEEEEEc
Q 019199          243 KSLDFIIDTA-------SGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       243 ~~~dvvid~~-------g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ++||+||-.+       .-...++.+.+.|+|+|.++.-.
T Consensus       194 ~~FDlVF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~  233 (296)
T PLN03075        194 KEYDVVFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS  233 (296)
T ss_pred             CCcCEEEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence            6799998664       12334788999999999998764

>PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain

Probab=96.32  E-value=0.089  Score=38.49  Aligned_cols=86  Identities=20%  Similarity=0.271  Sum_probs=59.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCC---CeEEEE-eCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFG---LNVTVL-STSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g---~~V~~~-~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      ++.++|+|.+|.+.+.-+...|   .+|+++ .+++++.+.+.++++..... .+..+.++    ..|++|-++.-.. +
T Consensus         1 kI~iIG~G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~-~~~~~~~~----~advvilav~p~~-~   74 (96)
T PF03807_consen    1 KIGIIGAGNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATA-DDNEEAAQ----EADVVILAVKPQQ-L   74 (96)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEES-EEHHHHHH----HTSEEEE-S-GGG-H
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhcccccc-CChHHhhc----cCCEEEEEECHHH-H
Confidence            4667899999999999999888   789855 99999988887888854332 12223332    4899999998665 6


Q ss_pred             HHHHHhc---ccCCEEEEE
Q 019199          259 DAYMSLL---KVAGVYVLV  274 (344)
Q Consensus       259 ~~~~~~l---~~~G~iv~~  274 (344)
                      ..+++.+   .++..++++
T Consensus        75 ~~v~~~i~~~~~~~~vis~   93 (96)
T PF03807_consen   75 PEVLSEIPHLLKGKLVISI   93 (96)
T ss_dssp             HHHHHHHHHHHTTSEEEEE
T ss_pred             HHHHHHHhhccCCCEEEEe
Confidence            6666554   455566554

It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D ....

>PRK06194 hypothetical protein; Provisional

Probab=96.32  E-value=0.024  Score=50.60  Aligned_cols=75  Identities=24%  Similarity=0.375  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|..++..+...|++|++++++.++++...+++   +...   ..|..+.+.+.+.       .+++
T Consensus         5 ~~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~i   84 (287)
T PRK06194          5 AGKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAV   84 (287)
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            3578999987 99999999988889999999998876655443332   3221   2244444443332       2568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.|.
T Consensus        85 d~vi~~Ag~   93 (287)
T PRK06194         85 HLLFNNAGV   93 (287)
T ss_pred             CEEEECCCC
Confidence            999998875

>TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family

Probab=96.31  E-value=0.032  Score=47.73  Aligned_cols=97  Identities=18%  Similarity=0.080  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE--------------e--CCCHHHHH-Hh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--------------V--SSDLEQMK-AL  241 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v--------------~--~~~~~~~~-~~  241 (344)
                      .++.+||+.|+|. |.-++.+|+ .|.+|++++-++.-++.+.++.+.....              +  ..+..... ..
T Consensus        33 ~~~~rvLd~GCG~-G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~  110 (213)
T TIGR03840        33 PAGARVFVPLCGK-SLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCGDFFALTAAD  110 (213)
T ss_pred             CCCCeEEEeCCCc-hhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEccCCCCCccc
Confidence            5677999999873 788888875 6999999999998777654444421100              0  00000000 11


Q ss_pred             cCCccEEEECCCC--------chhHHHHHHhcccCCEEEEEcCC
Q 019199          242 GKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       242 ~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+.+|.++|...-        ...++.+.+.|+|+|+++..+..
T Consensus       111 ~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~~  154 (213)
T TIGR03840       111 LGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITLD  154 (213)
T ss_pred             CCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEEE
Confidence            2458999996531        12367888999999998777654

Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity.

>PRK06940 short chain dehydrogenase; Provisional

Probab=96.31  E-value=0.056  Score=48.14  Aligned_cols=96  Identities=24%  Similarity=0.274  Sum_probs=60.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh------cCCccEE
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL------GKSLDFI  248 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~------~~~~dvv  248 (344)
                      +.+++|.|+|++|.+++..+. .|++|+++++++++++.+.+++   |..   ...|-.+.+.+.+.      .+++|++
T Consensus         2 ~k~~lItGa~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l   80 (275)
T PRK06940          2 KEVVVVIGAGGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL   80 (275)
T ss_pred             CCEEEEECCChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence            357888899999999888885 7999999999877665443332   322   12355555433222      2579999


Q ss_pred             EECCCCch---h---------------HHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTASGDH---P---------------FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~~~---~---------------~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++.|...   .               ++.++..++.+|+++.++..
T Consensus        81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~  127 (275)
T PRK06940         81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQ  127 (275)
T ss_pred             EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEec
Confidence            99988431   1               22333445566777766544

>PRK07985 oxidoreductase; Provisional

Probab=96.31  E-value=0.16  Score=45.73  Aligned_cols=98  Identities=16%  Similarity=0.089  Sum_probs=61.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHH---HHhCCCc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEA---LSLLGAD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~---~~~~g~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++.++.  ++.+.+   .++.|..   ...|..+.+.+.+.       .+
T Consensus        48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g  127 (294)
T PRK07985         48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG  127 (294)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence            5678999998 9999999999988999998876543  222222   1233432   22344554433221       26


Q ss_pred             CccEEEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++.+.|..                          ..++.++..++.+|+++.++..
T Consensus       128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~  187 (294)
T PRK07985        128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSI  187 (294)
T ss_pred             CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCc
Confidence            789999887631                          1122344445667899988755

>COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis]

Probab=96.30  E-value=0.037  Score=49.37  Aligned_cols=127  Identities=18%  Similarity=0.236  Sum_probs=73.5

Q ss_pred             cceEEEcCCCCCcccccccchhhhHhH--HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHH
Q 019199          143 ERYCYKIANDYPLALAAPLLCAGITVY--TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEE  219 (344)
Q Consensus       143 ~~~~~~~P~~~~~~~aa~l~~~~~ta~--~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~  219 (344)
                      ...++++.+++.+-..    ...+|++  .++.+.  .++|.+||-+|+|+ |..+|..+| +|+ +|++++-.+.-.+.
T Consensus       129 ~~~~i~lDPGlAFGTG----~HpTT~lcL~~Le~~--~~~g~~vlDvGcGS-GILaIAa~k-LGA~~v~g~DiDp~AV~a  200 (300)
T COG2264         129 DELNIELDPGLAFGTG----THPTTSLCLEALEKL--LKKGKTVLDVGCGS-GILAIAAAK-LGAKKVVGVDIDPQAVEA  200 (300)
T ss_pred             CceEEEEccccccCCC----CChhHHHHHHHHHHh--hcCCCEEEEecCCh-hHHHHHHHH-cCCceEEEecCCHHHHHH
Confidence            3567777777755433    2333333  233332  36999999999863 666666666 677 79999988765444


Q ss_pred             HHH---hCCCcEEEeCCCHHHHHHh-cCCccEEEECCC-Cc--hhHHHHHHhcccCCEEEEEcCC
Q 019199          220 ALS---LLGADKFVVSSDLEQMKAL-GKSLDFIIDTAS-GD--HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       220 ~~~---~~g~~~~v~~~~~~~~~~~-~~~~dvvid~~g-~~--~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++   .-+....+........... .+.+|+|+-+.= .+  .......+.++|+|++++.|..
T Consensus       201 a~eNa~~N~v~~~~~~~~~~~~~~~~~~~~DvIVANILA~vl~~La~~~~~~lkpgg~lIlSGIl  265 (300)
T COG2264         201 ARENARLNGVELLVQAKGFLLLEVPENGPFDVIVANILAEVLVELAPDIKRLLKPGGRLILSGIL  265 (300)
T ss_pred             HHHHHHHcCCchhhhcccccchhhcccCcccEEEehhhHHHHHHHHHHHHHHcCCCceEEEEeeh
Confidence            422   2222211100101111112 257999986542 21  2355677789999999999855

>PRK06398 aldose dehydrogenase; Validated

Probab=96.30  E-value=0.078  Score=46.62  Aligned_cols=70  Identities=23%  Similarity=0.135  Sum_probs=48.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      .|.++||+|+ +++|.+.+..+...|++|+++++++++....     .....|-.+++.+.+.       .+++|+++++
T Consensus         5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~-----~~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~   79 (258)
T PRK06398          5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDV-----DYFKVDVSNKEQVIKGIDYVISKYGRIDILVNN   79 (258)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCce-----EEEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999998 9999999999999999999998876543211     0122355555443332       2579999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        80 Ag~   82 (258)
T PRK06398         80 AGI   82 (258)
T ss_pred             CCC
Confidence            873

>PRK07889 enoyl-(acyl carrier protein) reductase; Provisional

Probab=96.28  E-value=0.14  Score=44.93  Aligned_cols=75  Identities=16%  Similarity=0.182  Sum_probs=50.3

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.+++|+|+   +++|.+.++.+...|++|++++++.  +..+.+.++++..   ...|-.+.+.+.+.       .++
T Consensus         6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~   85 (256)
T PRK07889          6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG   85 (256)
T ss_pred             cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   6999999998888999999988653  3344443445421   22344555443322       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        86 iD~li~nAG~   95 (256)
T PRK07889         86 LDGVVHSIGF   95 (256)
T ss_pred             CcEEEEcccc
Confidence            9999998874

>cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase

Probab=96.28  E-value=0.046  Score=46.23  Aligned_cols=49  Identities=27%  Similarity=0.333  Sum_probs=42.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD  227 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~  227 (344)
                      -.|.+++|+|.|.+|..+++.+...|++|++++.+.++.+.+.+.+|+.
T Consensus        26 l~gk~v~I~G~G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~~   74 (200)
T cd01075          26 LEGKTVAVQGLGKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGAT   74 (200)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCE
Confidence            4678999999999999999999999999999999888877775666643

Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc

>PRK12828 short chain dehydrogenase; Provisional

Probab=96.27  E-value=0.028  Score=48.51  Aligned_cols=75  Identities=20%  Similarity=0.240  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE-EEeCCCHHHHHHh-------cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK-FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~-~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      ++.++||+|+ |.+|..+++.+...|++|++++++.++.....++   .+... ..|..+.+.+.+.       .+++|+
T Consensus         6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   85 (239)
T PRK12828          6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA   85 (239)
T ss_pred             CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence            4789999998 9999999999888899999999987654333222   23222 2344444433221       257999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++.+.+.
T Consensus        86 vi~~ag~   92 (239)
T PRK12828         86 LVNIAGA   92 (239)
T ss_pred             EEECCcc
Confidence            9998763

>PRK07024 short chain dehydrogenase; Provisional

Probab=96.26  E-value=0.04  Score=48.35  Aligned_cols=74  Identities=15%  Similarity=0.105  Sum_probs=52.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c---EEEeCCCHHHHHHh-------cCCccE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      +.++||+|+ |++|...+..+...|++|++++++.++.+.+.+++..  .   ..+|..+.+.+.+.       .+.+|+
T Consensus         2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~   81 (257)
T PRK07024          2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV   81 (257)
T ss_pred             CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence            357999987 9999999998888899999999998877665444431  1   12344554443322       256899


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        82 lv~~ag~   88 (257)
T PRK07024         82 VIANAGI   88 (257)
T ss_pred             EEECCCc
Confidence            9998873

>PF02254 TrkA_N: TrkA-N domain; InterPro: IPR003148 The regulator of K+ conductance (RCK) domain is found in many ligand-gated K+ channels, most often attached to the intracellular carboxy terminus

Probab=96.26  E-value=0.15  Score=38.78  Aligned_cols=91  Identities=19%  Similarity=0.217  Sum_probs=64.2

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchh---H
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP---F  258 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~---~  258 (344)
                      |+|.|.|.+|+..++.++..+.+|++++.++++.+.+ ++.|...+. |..+++.+.+.. .+++.++-+.+....   .
T Consensus         1 vvI~G~g~~~~~i~~~L~~~~~~vvvid~d~~~~~~~-~~~~~~~i~gd~~~~~~l~~a~i~~a~~vv~~~~~d~~n~~~   79 (116)
T PF02254_consen    1 VVIIGYGRIGREIAEQLKEGGIDVVVIDRDPERVEEL-REEGVEVIYGDATDPEVLERAGIEKADAVVILTDDDEENLLI   79 (116)
T ss_dssp             EEEES-SHHHHHHHHHHHHTTSEEEEEESSHHHHHHH-HHTTSEEEES-TTSHHHHHHTTGGCESEEEEESSSHHHHHHH
T ss_pred             eEEEcCCHHHHHHHHHHHhCCCEEEEEECCcHHHHHH-HhcccccccccchhhhHHhhcCccccCEEEEccCCHHHHHHH
Confidence            5788999999999999999666999999999998888 466644322 345566777664 679998888876542   2


Q ss_pred             HHHHHhcccCCEEEEEc
Q 019199          259 DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g  275 (344)
                      ...++.+.+..+++..-
T Consensus        80 ~~~~r~~~~~~~ii~~~   96 (116)
T PF02254_consen   80 ALLARELNPDIRIIARV   96 (116)
T ss_dssp             HHHHHHHTTTSEEEEEE
T ss_pred             HHHHHHHCCCCeEEEEE
Confidence            23444455667776553

The domain is prevalent among prokaryotic K+ channels, and also found in eukaryotic, high-conductance Ca2+-activated K+ channels (BK channels) [, , ]. Largely involved in redox-linked regulation of potassium channels, the N-terminal part of the RCK domain is predicted to be an active dehydrogenase at least in some cases []. Some have a conserved sequence motif (G-x-G-x-x-G-x(n)-[DE]) for NAD+ binding [], but others do not, reflecting the diversity of ligands for RCK domains. The C-terminal part is less conserved, being absent in some channels, such as the kefC antiporter from Escherichia coli. It is predicted to bind unidentified ligands and to regulate sulphate, sodium and other transporters. The X-ray structure of several RCK domains has been solved [, , ]. It reveals an alpha-beta fold similar to dehydrogenase enzymes. The domain forms a homodimer, producing a cleft between two lobes. It has a composite structure, with an N-terminal (RCK-N), and a C-terminal (RCK-C) subdomain. The RCK-N subdomain forms a Rossmann fold with two alpha helices on one side of a six stranded parallel beta sheet and three alpha helices on the other side. The RCK-C subdomain is an all-beta-strand fold. It forms an extention of the dimer interface and further stabilises the RCK homodimer [, , ]. Ca2+ is a ligand that opens the channel in a concentration-dependent manner. Two Ca2+ ions are located at the base of a cleft between two RCK domains, coordinated by the carboxylate groups of two glutamate residues, and by an aspartate residue [, , ]. RCK domains occur in at least five different contexts: As a single domain on the C terminus of some K+ channels (for example, many prokaryotic K+ channels). As two tandem RCK domains on the C terminus of some transporters that form gating rings (for example, eukaryotic BK channels). The gating ring has an arrangement of eight identical RCK domains, one from each of the four pore-forming subunits and four from the intracellular solution. As two domains, one at the N terminus and another at the C terminus of transporter (for example, the prokaryotic trk system potassium uptake protein A). As a soluble protein (not part of a K+ channel) consisting of two tandem RCK domains. As a soluble protein consisting of a single RCK domain. This entry represents the N-terminal subdomain of RCK.; GO: 0006813 potassium ion transport; PDB: 3L4B_E 1LSS_C 3LLV_A 2FY8_D 2AEF_A 1LNQ_E 3RBX_C 3KXD_A 2AEJ_A 3RBZ_A ....

>PRK14188 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.26  E-value=0.043  Score=49.17  Aligned_cols=95  Identities=17%  Similarity=0.183  Sum_probs=70.6

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..|.....--.|.+|+|+|. +.+|.-.+.++...|+.|++.......+                     
T Consensus       137 ~~PcTp~ai~~ll~~~~i~~~Gk~V~viGrs~~mG~PmA~~L~~~g~tVtv~~~rT~~l---------------------  195 (296)
T PRK14188        137 LVPCTPLGCMMLLRRVHGDLSGLNAVVIGRSNLVGKPMAQLLLAANATVTIAHSRTRDL---------------------  195 (296)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEEcCCcchHHHHHHHHHhCCCEEEEECCCCCCH---------------------
Confidence            467776666666665554468999999994 9999999999999999999985322211                     


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+..|+++-++|.+..+...+  ++++..++++|..
T Consensus       196 ~e~~~~ADIVIsavg~~~~v~~~~--lk~GavVIDvGin  232 (296)
T PRK14188        196 PAVCRRADILVAAVGRPEMVKGDW--IKPGATVIDVGIN  232 (296)
T ss_pred             HHHHhcCCEEEEecCChhhcchhe--ecCCCEEEEcCCc
Confidence            122345899999999887555544  8999999999865

>PRK15469 ghrA bifunctional glyoxylate/hydroxypyruvate reductase A; Provisional

Probab=96.25  E-value=0.047  Score=49.59  Aligned_cols=90  Identities=16%  Similarity=0.236  Sum_probs=63.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.++..++..      +.....   ..+.+.++-.+.|+++.+.......
T Consensus       134 l~g~tvgIvG~G~IG~~vA~~l~afG~~V~~~~~~~~~~~------~~~~~~---~~~~l~e~l~~aDvvv~~lPlt~~T  204 (312)
T PRK15469        134 REDFTIGILGAGVLGSKVAQSLQTWGFPLRCWSRSRKSWP------GVQSFA---GREELSAFLSQTRVLINLLPNTPET  204 (312)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCCCCCC------Cceeec---ccccHHHHHhcCCEEEECCCCCHHH
Confidence            3678999999999999999999999999999987543221      222221   1223444456789999888743322


Q ss_pred             -----HHHHHhcccCCEEEEEcCC
Q 019199          259 -----DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 -----~~~~~~l~~~G~iv~~g~~  277 (344)
                           ...++.++++..+|.+|-.
T Consensus       205 ~~li~~~~l~~mk~ga~lIN~aRG  228 (312)
T PRK15469        205 VGIINQQLLEQLPDGAYLLNLARG  228 (312)
T ss_pred             HHHhHHHHHhcCCCCcEEEECCCc
Confidence                 3467789999998888743

>PRK07370 enoyl-(acyl carrier protein) reductase; Validated

Probab=96.25  E-value=0.098  Score=46.04  Aligned_cols=98  Identities=17%  Similarity=0.101  Sum_probs=60.9

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch------hHHHHHHhCCC--cEEEeCCCHHHHHHh-------
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS------KKEEALSLLGA--DKFVVSSDLEQMKAL-------  241 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~------~~~~~~~~~g~--~~~v~~~~~~~~~~~-------  241 (344)
                      .|.+++|+|+   +++|.+.+..+...|++|+++.++.+      ..+.+.++.+.  ...+|-.+.+.+.+.       
T Consensus         5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~   84 (258)
T PRK07370          5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK   84 (258)
T ss_pred             CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence            4678999986   48999999988889999988754322      23333222221  112355555443322       


Q ss_pred             cCCccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          242 GKSLDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       242 ~~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+++|+++++.|...                             ..+.++..++.+|+|+.++..
T Consensus        85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~  149 (258)
T PRK07370         85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYL  149 (258)
T ss_pred             cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecc
Confidence            257999999887320                             113345556677999988654

>PLN02928 oxidoreductase family protein

Probab=96.25  E-value=0.044  Score=50.54  Aligned_cols=115  Identities=18%  Similarity=0.222  Sum_probs=72.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-----CcEEEeC-CCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----ADKFVVS-SDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-----~~~~v~~-~~~~~~~~~~~~~dvvid~~  252 (344)
                      -.|.++.|+|.|.+|..+++.++.+|++|++.+++..+....  .++     ....++. .....+.++-...|+|+.+.
T Consensus       157 l~gktvGIiG~G~IG~~vA~~l~afG~~V~~~dr~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~L~ell~~aDiVvl~l  234 (347)
T PLN02928        157 LFGKTVFILGYGAIGIELAKRLRPFGVKLLATRRSWTSEPED--GLLIPNGDVDDLVDEKGGHEDIYEFAGEADIVVLCC  234 (347)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHhhCCCEEEEECCCCChhhhh--hhccccccccccccccCcccCHHHHHhhCCEEEECC
Confidence            357899999999999999999999999999998764322111  110     0011100 01123344446699999887


Q ss_pred             CCch-----hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          253 SGDH-----PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       253 g~~~-----~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                      ....     .-...++.|+++..+|.++-..-+             +-+.+++.+.+|++.
T Consensus       235 Plt~~T~~li~~~~l~~Mk~ga~lINvaRG~lV-------------de~AL~~AL~~g~i~  282 (347)
T PLN02928        235 TLTKETAGIVNDEFLSSMKKGALLVNIARGGLL-------------DYDAVLAALESGHLG  282 (347)
T ss_pred             CCChHhhcccCHHHHhcCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCee
Confidence            6322     124677889999999888633111             234566667777663

>PRK06718 precorrin-2 dehydrogenase; Reviewed

Probab=96.25  E-value=0.012  Score=49.84  Aligned_cols=92  Identities=11%  Similarity=0.032  Sum_probs=59.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      -.|.+|||+|+|.+|...+..+...|++|+++..... ++..+. ..+. ..+......  ...-.++|+||-+++.+. 
T Consensus         8 l~~k~vLVIGgG~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~~~~--~~~l~~adlViaaT~d~e-   82 (202)
T PRK06718          8 LSNKRVVIVGGGKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQKEFE--PSDIVDAFLVIAATNDPR-   82 (202)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEecCCC--hhhcCCceEEEEcCCCHH-
Confidence            3578999999999999999888889999999875432 223321 2221 112221111  111257999999999887 


Q ss_pred             HHHHHHhcccCCEEEEEc
Q 019199          258 FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g  275 (344)
                      ++..+...+..+.++...
T Consensus        83 lN~~i~~~a~~~~lvn~~  100 (202)
T PRK06718         83 VNEQVKEDLPENALFNVI  100 (202)
T ss_pred             HHHHHHHHHHhCCcEEEC
Confidence            777776666556666554

>PRK07890 short chain dehydrogenase; Provisional

Probab=96.25  E-value=0.025  Score=49.62  Aligned_cols=75  Identities=21%  Similarity=0.254  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|...+..+...|++|+++++++++.+.+.+++   +..   ...|..+.+.+...       .+++
T Consensus         4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (258)
T PRK07890          4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV   83 (258)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence            5678999998 99999999999899999999999887665553333   321   23344454433321       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.|.
T Consensus        84 d~vi~~ag~   92 (258)
T PRK07890         84 DALVNNAFR   92 (258)
T ss_pred             cEEEECCcc
Confidence            999998864

>cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2

Probab=96.25  E-value=0.069  Score=46.12  Aligned_cols=102  Identities=12%  Similarity=0.116  Sum_probs=61.4

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe---EEEEeCC----chhH-------HHHHHhCCCcEEEeCCC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN---VTVLSTS----TSKK-------EEALSLLGADKFVVSSD  234 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~---V~~~~~~----~~~~-------~~~~~~~g~~~~v~~~~  234 (344)
                      ..+++..+.--.+.+++|+|+|+.|.+++..+...|++   ++++++.    .++.       ..+.+.++... .+ .+
T Consensus        13 ~~al~~~g~~l~~~rvlvlGAGgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~~~~~~~-~~-~~   90 (226)
T cd05311          13 LNALKLVGKKIEEVKIVINGAGAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAKETNPEK-TG-GT   90 (226)
T ss_pred             HHHHHHhCCCccCCEEEEECchHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHHHhccCc-cc-CC
Confidence            33454444324678999999999999999988888985   8899988    4432       22223443211 11 11


Q ss_pred             HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                         +.+...++|++|++++....-...++.+.+...++.+.
T Consensus        91 ---l~~~l~~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls  128 (226)
T cd05311          91 ---LKEALKGADVFIGVSRPGVVKKEMIKKMAKDPIVFALA  128 (226)
T ss_pred             ---HHHHHhcCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence               21222458999998873321245666666666555443

Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph

>PRK07502 cyclohexadienyl dehydrogenase; Validated

Probab=96.24  E-value=0.037  Score=50.24  Aligned_cols=90  Identities=21%  Similarity=0.243  Sum_probs=61.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP--  257 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~--  257 (344)
                      .+|.|+|+|.+|.+.+..++..|.  +|++.++++++.+.+ ++.|....+... .   .+...++|+||.++.....  
T Consensus         7 ~~I~IIG~G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a-~~~g~~~~~~~~-~---~~~~~~aDvViiavp~~~~~~   81 (307)
T PRK07502          7 DRVALIGIGLIGSSLARAIRRLGLAGEIVGADRSAETRARA-RELGLGDRVTTS-A---AEAVKGADLVILCVPVGASGA   81 (307)
T ss_pred             cEEEEEeeCHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHH-HhCCCCceecCC-H---HHHhcCCCEEEECCCHHHHHH
Confidence            579999999999999998888884  899999998888777 567742211111 1   1223568999999886431  


Q ss_pred             -HHHHHHhcccCCEEEEEcC
Q 019199          258 -FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 -~~~~~~~l~~~G~iv~~g~  276 (344)
                       +......++++..++++|.
T Consensus        82 v~~~l~~~l~~~~iv~dvgs  101 (307)
T PRK07502         82 VAAEIAPHLKPGAIVTDVGS  101 (307)
T ss_pred             HHHHHHhhCCCCCEEEeCcc
Confidence             2333345566777776664

>PRK07677 short chain dehydrogenase; Provisional

Probab=96.23  E-value=0.03  Score=49.03  Aligned_cols=74  Identities=23%  Similarity=0.244  Sum_probs=51.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc-EE--EeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-KF--VVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-~~--v~~~~~~~~~~~-------~~~~d  246 (344)
                      |.++||.|+ |++|.+.++.+...|++|++++++.++.+.+.+++   +.. ..  .|-.+++.+.+.       .+++|
T Consensus         1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   80 (252)
T PRK07677          1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID   80 (252)
T ss_pred             CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence            468899987 99999999999999999999999887665543322   322 12  244455444332       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        81 ~lI~~ag~   88 (252)
T PRK07677         81 ALINNAAG   88 (252)
T ss_pred             EEEECCCC
Confidence            99998873

>PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases

Probab=96.23  E-value=0.056  Score=43.84  Aligned_cols=74  Identities=27%  Similarity=0.266  Sum_probs=47.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCC--chhHHHHH---HhCCCcEE---EeCCCHHHHHHh-------cCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTS--TSKKEEAL---SLLGADKF---VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~--~~~~~~~~---~~~g~~~~---v~~~~~~~~~~~-------~~~  244 (344)
                      +++||+|+ +++|.+.++.+-..|+ +|+++.++  .++.+.+.   +..+....   .|..+.+.+++.       .+.
T Consensus         1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (167)
T PF00106_consen    1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP   80 (167)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred             CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence            36899997 9999998888877777 77778877  34444332   23343221   234444443332       368


Q ss_pred             ccEEEECCCCc
Q 019199          245 LDFIIDTASGD  255 (344)
Q Consensus       245 ~dvvid~~g~~  255 (344)
                      +|++|.+.|..
T Consensus        81 ld~li~~ag~~   91 (167)
T PF00106_consen   81 LDILINNAGIF   91 (167)
T ss_dssp             ESEEEEECSCT
T ss_pred             ccccccccccc
Confidence            99999988853

As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A ....

>KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.22  E-value=0.029  Score=49.58  Aligned_cols=76  Identities=20%  Similarity=0.219  Sum_probs=52.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCC-C-cEEEeCCCHHHHHH-------hcCCc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLG-A-DKFVVSSDLEQMKA-------LGKSL  245 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g-~-~~~v~~~~~~~~~~-------~~~~~  245 (344)
                      -.|+.|||+|+ +++|.+.++-...+|+++.+.+.+.+-..+-.+   +.| + ..+.|-++.+.+.+       .-+.+
T Consensus        36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~~~g~~~~y~cdis~~eei~~~a~~Vk~e~G~V  115 (300)
T KOG1201|consen   36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIRKIGEAKAYTCDISDREEIYRLAKKVKKEVGDV  115 (300)
T ss_pred             ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHHhcCceeEEEecCCCHHHHHHHHHHHHHhcCCc
Confidence            46899999988 799988777777788999888888764433322   334 2 34556566544332       23789


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++|++|-
T Consensus       116 ~ILVNNAGI  124 (300)
T KOG1201|consen  116 DILVNNAGI  124 (300)
T ss_pred             eEEEecccc
Confidence            999998884

>PRK07453 protochlorophyllide oxidoreductase; Validated

Probab=96.22  E-value=0.023  Score=51.80  Aligned_cols=74  Identities=26%  Similarity=0.352  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---Cc-E--EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---AD-K--FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~-~--~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|..+++.+...|++|++++++.++.+.+.+++.   .. .  ..|-.+.+.+.+.       .+++
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   84 (322)
T PRK07453          5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL   84 (322)
T ss_pred             CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence            4678999987 999999999888889999999998887766544442   11 1  2344554433322       2469


Q ss_pred             cEEEECCC
Q 019199          246 DFIIDTAS  253 (344)
Q Consensus       246 dvvid~~g  253 (344)
                      |++|++.|
T Consensus        85 D~li~nAg   92 (322)
T PRK07453         85 DALVCNAA   92 (322)
T ss_pred             cEEEECCc
Confidence            99999887

>PRK07478 short chain dehydrogenase; Provisional

Probab=96.22  E-value=0.03  Score=49.03  Aligned_cols=75  Identities=24%  Similarity=0.229  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++   .+.+.   ..|..+.+.+.+.       .+++
T Consensus         5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (254)
T PRK07478          5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL   84 (254)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999998 9999999998888999999999988876655333   23222   1244454433322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        85 d~li~~ag~   93 (254)
T PRK07478         85 DIAFNNAGT   93 (254)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK08317 hypothetical protein; Provisional

Probab=96.21  E-value=0.042  Score=47.46  Aligned_cols=102  Identities=20%  Similarity=0.221  Sum_probs=65.9

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCCcEEEeCCCHHHHHHhcCCccEE
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGADKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ....+.++++||.+|+|. |..+..+++..+  .++++++.+++.++.+++.   .+....+...+..........+|+|
T Consensus        13 ~~~~~~~~~~vLdiG~G~-G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~~D~v   91 (241)
T PRK08317         13 ELLAVQPGDRVLDVGCGP-GNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRGDADGLPFPDGSFDAV   91 (241)
T ss_pred             HHcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEecccccCCCCCCCceEE
Confidence            334458899999999975 888888888773  5899999998887777443   1111111111111111112568888


Q ss_pred             EECC-----CC-chhHHHHHHhcccCCEEEEEcC
Q 019199          249 IDTA-----SG-DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       249 id~~-----g~-~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +...     .. ...+..+.+.|+++|+++....
T Consensus        92 ~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~  125 (241)
T PRK08317         92 RSDRVLQHLEDPARALAEIARVLRPGGRVVVLDT  125 (241)
T ss_pred             EEechhhccCCHHHHHHHHHHHhcCCcEEEEEec
Confidence            7532     11 2357889999999999987753

>PRK07402 precorrin-6B methylase; Provisional

Probab=96.20  E-value=0.16  Score=42.76  Aligned_cols=98  Identities=20%  Similarity=0.212  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccEE-E
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFI-I  249 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dvv-i  249 (344)
                      .++++++||-+|+|. |..++.+++.. +.+|+.++.+++..+.+.+   +++..  .++..+..+.+......+|.+ +
T Consensus        37 ~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v~~~~~d~~~~~~~~~~~~d~v~~  115 (196)
T PRK07402         37 RLEPDSVLWDIGAGT-GTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNVEVIEGSAPECLAQLAPAPDRVCI  115 (196)
T ss_pred             CCCCCCEEEEeCCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCeEEEECchHHHHhhCCCCCCEEEE
Confidence            447889998888753 55566666654 4699999999887766643   34532  233333223333333334444 4


Q ss_pred             ECCCC-chhHHHHHHhcccCCEEEEEc
Q 019199          250 DTASG-DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       250 d~~g~-~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +.... ...++.+.+.|+++|+++...
T Consensus       116 ~~~~~~~~~l~~~~~~LkpgG~li~~~  142 (196)
T PRK07402        116 EGGRPIKEILQAVWQYLKPGGRLVATA  142 (196)
T ss_pred             ECCcCHHHHHHHHHHhcCCCeEEEEEe
Confidence            43222 245788889999999998774

>TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain

Probab=96.18  E-value=0.093  Score=44.57  Aligned_cols=92  Identities=13%  Similarity=0.142  Sum_probs=60.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      .|.+|||+|+|.+|..-++.+...|++|++++.... .+..+ .+.|.-..+. .+..  .....++++||-+++.+..-
T Consensus         8 ~gk~vlVvGgG~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l-~~~~~i~~~~-~~~~--~~dl~~~~lVi~at~d~~ln   83 (205)
T TIGR01470         8 EGRAVLVVGGGDVALRKARLLLKAGAQLRVIAEELESELTLL-AEQGGITWLA-RCFD--ADILEGAFLVIAATDDEELN   83 (205)
T ss_pred             CCCeEEEECcCHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHH-HHcCCEEEEe-CCCC--HHHhCCcEEEEECCCCHHHH
Confidence            467999999999999999999999999999886643 34444 2334222222 2111  11125799999999987634


Q ss_pred             HHHHHhcccCCEEEEEc
Q 019199          259 DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g  275 (344)
                      .......+..|..+...
T Consensus        84 ~~i~~~a~~~~ilvn~~  100 (205)
T TIGR01470        84 RRVAHAARARGVPVNVV  100 (205)
T ss_pred             HHHHHHHHHcCCEEEEC
Confidence            44555556667776543

This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms.

>PLN02253 xanthoxin dehydrogenase

Probab=96.17  E-value=0.039  Score=49.09  Aligned_cols=75  Identities=19%  Similarity=0.220  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c---EEEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++++..+.+.++++.  .   ...|-.+.+.+.+.       .+++|
T Consensus        17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id   96 (280)
T PLN02253         17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD   96 (280)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999987 9999999988888899999999877665554444431  1   12355555444332       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        97 ~li~~Ag~  104 (280)
T PLN02253         97 IMVNNAGL  104 (280)
T ss_pred             EEEECCCc
Confidence            99998874

>KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=96.17  E-value=0.079  Score=47.19  Aligned_cols=110  Identities=22%  Similarity=0.161  Sum_probs=72.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEE-------eCCCHHHHH----Hh---c
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFV-------VSSDLEQMK----AL---G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v-------~~~~~~~~~----~~---~  242 (344)
                      ++...++|+|. .++|++....++..|+.|+++.++.+++..+.++++. ..+.       |-.+.+...    ++   .
T Consensus        31 k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~d~~~Y~~v~~~~~~l~~~~  110 (331)
T KOG1210|consen   31 KPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSVDVIDYDSVSKVIEELRDLE  110 (331)
T ss_pred             CccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEeccccccHHHHHHHHhhhhhcc
Confidence            45578899875 8999999999999999999999999999988777763 2111       112222222    22   2


Q ss_pred             CCccEEEECCCCc----------h---------------hHHHHHHhcc---cCCEEEEEcCC-CccccCCceee
Q 019199          243 KSLDFIIDTASGD----------H---------------PFDAYMSLLK---VAGVYVLVGFP-SKVKFSPASLN  288 (344)
Q Consensus       243 ~~~dvvid~~g~~----------~---------------~~~~~~~~l~---~~G~iv~~g~~-~~~~~~~~~~~  288 (344)
                      +-+|.+|.|.|..          +               ..+.++..++   +.|+|+.++.. ....+..+...
T Consensus       111 ~~~d~l~~cAG~~v~g~f~~~s~~~v~~~m~vNylgt~~v~~~~~~~mk~~~~~g~I~~vsS~~a~~~i~GysaY  185 (331)
T KOG1210|consen  111 GPIDNLFCCAGVAVPGLFEDLSPEVVEKLMDVNYLGTVNVAKAAARAMKKREHLGRIILVSSQLAMLGIYGYSAY  185 (331)
T ss_pred             CCcceEEEecCcccccccccCCHHHHHHHHHhhhhhhHHHHHHHHHHhhccccCcEEEEehhhhhhcCccccccc
Confidence            5689999999853          1               1223333332   34699999876 55555555444

>PRK08177 short chain dehydrogenase; Provisional

Probab=96.16  E-value=0.039  Score=47.37  Aligned_cols=72  Identities=19%  Similarity=0.173  Sum_probs=50.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHh----c-CCccEEEECCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKAL----G-KSLDFIIDTAS  253 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~----~-~~~dvvid~~g  253 (344)
                      .+++|+|+ |++|.+.+..+...|++|+++++++++.+.+ ++++..  ..+|-.+.+.++++    . +++|++|.+.|
T Consensus         2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag   80 (225)
T PRK08177          2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTAL-QALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG   80 (225)
T ss_pred             CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHH-HhccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence            46899997 9999999988888899999999998876655 344321  22344555444332    2 46999998775


Q ss_pred             C
Q 019199          254 G  254 (344)
Q Consensus       254 ~  254 (344)
                      .
T Consensus        81 ~   81 (225)
T PRK08177         81 I   81 (225)
T ss_pred             c
Confidence            3

>PRK03659 glutathione-regulated potassium-efflux system protein KefB; Provisional

Probab=96.16  E-value=0.078  Score=52.77  Aligned_cols=95  Identities=16%  Similarity=0.137  Sum_probs=72.9

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchhH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPF  258 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~~  258 (344)
                      .++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...++ |..+++.+++.+ .++|.++-+.+++..-
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vv~~~~d~~~n  478 (601)
T PRK03659        400 KPQVIIVGFGRFGQVIGRLLMANKMRITVLERDISAVNLM-RKYGYKVYYGDATQLELLRAAGAEKAEAIVITCNEPEDT  478 (601)
T ss_pred             cCCEEEecCchHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhCCCeEEEeeCCCHHHHHhcCCccCCEEEEEeCCHHHH
Confidence            3578999999999999999999999999999999999888 577865433 456677777765 7899999998876522


Q ss_pred             ---HHHHHhcccCCEEEEEcC
Q 019199          259 ---DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       259 ---~~~~~~l~~~G~iv~~g~  276 (344)
                         ....+...|..+++....
T Consensus       479 ~~i~~~~r~~~p~~~IiaRa~  499 (601)
T PRK03659        479 MKIVELCQQHFPHLHILARAR  499 (601)
T ss_pred             HHHHHHHHHHCCCCeEEEEeC
Confidence               233455667778876643

>PLN00141 Tic62-NAD(P)-related group II protein; Provisional

Probab=96.15  E-value=0.091  Score=46.03  Aligned_cols=99  Identities=15%  Similarity=0.057  Sum_probs=62.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-CCcE-EEeCCC-HHHHHHhc-CCccEEEECCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-GADK-FVVSSD-LEQMKALG-KSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~-~v~~~~-~~~~~~~~-~~~dvvid~~g  253 (344)
                      ..+.++||+|+ |.+|..++..+...|.+|+++.++.++........ +... ..|..+ ...+.+.. .++|++|.+.|
T Consensus        15 ~~~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~~~~l~~~~~~~~d~vi~~~g   94 (251)
T PLN00141         15 VKTKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEGSDKLVEAIGDDSDAVICATG   94 (251)
T ss_pred             ccCCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCCHHHHHHHhhcCCCEEEECCC
Confidence            34578999998 99999999888888999999998877654332111 2222 124443 23333333 57999998876


Q ss_pred             Cch-------------hHHHHHHhccc--CCEEEEEcCC
Q 019199          254 GDH-------------PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       254 ~~~-------------~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                      ...             ....+++.++.  .++++.++..
T Consensus        95 ~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~  133 (251)
T PLN00141         95 FRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSI  133 (251)
T ss_pred             CCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEccc
Confidence            421             13445555543  3688887654

>PRK05884 short chain dehydrogenase; Provisional

Probab=96.15  E-value=0.033  Score=47.87  Aligned_cols=71  Identities=21%  Similarity=0.210  Sum_probs=51.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh----cCCccEEEECCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL----GKSLDFIIDTAS  253 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~----~~~~dvvid~~g  253 (344)
                      +++|+|+ |++|.+.++.+...|++|++++++.++.+.+.++.+... ..|..+.+.+.+.    .+++|+++++.|
T Consensus         2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~id~lv~~ag   78 (223)
T PRK05884          2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFPHHLDTIVNVPA   78 (223)
T ss_pred             eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHhhcCcEEEECCC
Confidence            4889987 999999999998899999999999888776645555432 2355555544332    246899998765

>PRK08589 short chain dehydrogenase; Validated

Probab=96.15  E-value=0.038  Score=49.04  Aligned_cols=74  Identities=20%  Similarity=0.220  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ +++|.+.++.+...|++|++++++ ++.+...+++   +..   ...|-.+.+.+.+.       .+++
T Consensus         5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i   83 (272)
T PRK08589          5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV   83 (272)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence            4678999998 999999998888899999999988 5544332332   321   23344554433321       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        84 d~li~~Ag~   92 (272)
T PRK08589         84 DVLFNNAGV   92 (272)
T ss_pred             CEEEECCCC
Confidence            999998874

>PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B

Probab=96.14  E-value=0.0093  Score=44.64  Aligned_cols=88  Identities=19%  Similarity=0.212  Sum_probs=58.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      .|.+|||+|+|.+|..-++.+...|++|++++...   ... +  +--... .+..   .+...++++|+-+.+.+..-+
T Consensus         6 ~~~~vlVvGgG~va~~k~~~Ll~~gA~v~vis~~~---~~~-~--~~i~~~-~~~~---~~~l~~~~lV~~at~d~~~n~   75 (103)
T PF13241_consen    6 KGKRVLVVGGGPVAARKARLLLEAGAKVTVISPEI---EFS-E--GLIQLI-RREF---EEDLDGADLVFAATDDPELNE   75 (103)
T ss_dssp             TT-EEEEEEESHHHHHHHHHHCCCTBEEEEEESSE---HHH-H--TSCEEE-ESS----GGGCTTESEEEE-SS-HHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCch---hhh-h--hHHHHH-hhhH---HHHHhhheEEEecCCCHHHHH
Confidence            57889999999999999999999999999999876   222 1  211122 2221   122467999999999887445


Q ss_pred             HHHHhcccCCEEEEEcCC
Q 019199          260 AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       260 ~~~~~l~~~G~iv~~g~~  277 (344)
                      ......+..|.++.....
T Consensus        76 ~i~~~a~~~~i~vn~~D~   93 (103)
T PF13241_consen   76 AIYADARARGILVNVVDD   93 (103)
T ss_dssp             HHHHHHHHTTSEEEETT-
T ss_pred             HHHHHHhhCCEEEEECCC
Confidence            555555668888877543

>PTZ00098 phosphoethanolamine N-methyltransferase; Provisional

Probab=96.13  E-value=0.047  Score=48.37  Aligned_cols=102  Identities=15%  Similarity=0.134  Sum_probs=64.9

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-c-EEEeCCCHHHHHHhcCCccEEEEC-
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-D-KFVVSSDLEQMKALGKSLDFIIDT-  251 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~-~~v~~~~~~~~~~~~~~~dvvid~-  251 (344)
                      ...+.++.+||-+|+|. |..+..+++..+++|+.++.+++..+.+.+.... . ..+...+.....-..+.||+|+.. 
T Consensus        47 ~l~l~~~~~VLDiGcG~-G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~D~~~~~~~~~~FD~V~s~~  125 (263)
T PTZ00098         47 DIELNENSKVLDIGSGL-GGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEANDILKKDFPENTFDMIYSRD  125 (263)
T ss_pred             hCCCCCCCEEEEEcCCC-ChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEECCcccCCCCCCCeEEEEEhh
Confidence            33458999999999863 5566777777788999999998887777544432 1 111111111100012469999852 


Q ss_pred             -C---C---CchhHHHHHHhcccCCEEEEEcCC
Q 019199          252 -A---S---GDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       252 -~---g---~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       .   +   -...++.+.+.|+|+|+++.....
T Consensus       126 ~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~~  158 (263)
T PTZ00098        126 AILHLSYADKKKLFEKCYKWLKPNGILLITDYC  158 (263)
T ss_pred             hHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence             1   1   123467788999999999987643

>TIGR02992 ectoine_eutC ectoine utilization protein EutC

Probab=96.11  E-value=0.028  Score=51.40  Aligned_cols=93  Identities=16%  Similarity=0.259  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHhC----CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGK-AFGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~-~~g~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      +...+++|+|+|..+.+.+..+. ..+. +|.+..++.++.+.+.+++    |.. +....+.   .+.-.++|+|+.++
T Consensus       127 ~~~~~v~iiGaG~qA~~~~~al~~~~~i~~v~V~~R~~~~a~~~a~~~~~~~g~~-v~~~~~~---~~av~~aDiVvtaT  202 (326)
T TIGR02992       127 EDSSVVAIFGAGMQARLQLEALTLVRDIRSARIWARDSAKAEALALQLSSLLGID-VTAATDP---RAAMSGADIIVTTT  202 (326)
T ss_pred             CCCcEEEEECCCHHHHHHHHHHHHhCCccEEEEECCCHHHHHHHHHHHHhhcCce-EEEeCCH---HHHhccCCEEEEec
Confidence            45678999999999988877776 4676 8999999998877665544    432 2222222   22235799999998


Q ss_pred             CCchh-HHHHHHhcccCCEEEEEcCC
Q 019199          253 SGDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       253 g~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +...- +.  .+.++++-.+..+|..
T Consensus       203 ~s~~p~i~--~~~l~~g~~i~~vg~~  226 (326)
T TIGR02992       203 PSETPILH--AEWLEPGQHVTAMGSD  226 (326)
T ss_pred             CCCCcEec--HHHcCCCcEEEeeCCC
Confidence            76431 22  2457888888888854

Members of this protein family are EutA, a predicted arylmalonate decarboxylase found in a conserved ectoine utilization operon of species that include Sinorhizobium meliloti 1021 (where it is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida. This family belongs to the ornithine cyclodeaminase/mu-crystallin family (pfam02423).

>PRK07340 ornithine cyclodeaminase; Validated

Probab=96.09  E-value=0.03  Score=50.70  Aligned_cols=93  Identities=17%  Similarity=0.152  Sum_probs=65.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      ....+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++...  .+. ..+   +.+.-.++|+|+.++.+
T Consensus       123 ~~~~~v~IiGaG~qa~~~~~al~~~~~~~~v~v~~r~~~~a~~~a~~~~~~~~~~~-~~~---~~~av~~aDiVitaT~s  198 (304)
T PRK07340        123 APPGDLLLIGTGVQARAHLEAFAAGLPVRRVWVRGRTAASAAAFCAHARALGPTAE-PLD---GEAIPEAVDLVVTATTS  198 (304)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHhcCCeeE-ECC---HHHHhhcCCEEEEccCC
Confidence            566789999999999998888764 576 7999999988877766666421  111 122   22233579999998886


Q ss_pred             chhHHHHHHhcccCCEEEEEcCC
Q 019199          255 DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       255 ~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..-+-..  .++|+-.+..+|..
T Consensus       199 ~~Pl~~~--~~~~g~hi~~iGs~  219 (304)
T PRK07340        199 RTPVYPE--AARAGRLVVAVGAF  219 (304)
T ss_pred             CCceeCc--cCCCCCEEEecCCC
Confidence            5433233  37999999999865

>PRK14178 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=96.09  E-value=0.072  Score=47.16  Aligned_cols=95  Identities=18%  Similarity=0.180  Sum_probs=71.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..+.....--.|.+|+|+|- ..+|..+..++...|++|++..+....+.                    
T Consensus       131 ~~PcTp~av~~ll~~~~i~l~Gk~V~ViGrs~~vGrpla~lL~~~~atVtv~hs~t~~L~--------------------  190 (279)
T PRK14178        131 FAPCTPNGIMTLLHEYKISIAGKRAVVVGRSIDVGRPMAALLLNADATVTICHSKTENLK--------------------  190 (279)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCccccHHHHHHHHhCCCeeEEEecChhHHH--------------------
Confidence            467766666666666655468999999997 59999999999999999999886543332                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++.++|.+..+..  +.++++..++++|..
T Consensus       191 -~~~~~ADIvI~Avgk~~lv~~--~~vk~GavVIDVgi~  226 (279)
T PRK14178        191 -AELRQADILVSAAGKAGFITP--DMVKPGATVIDVGIN  226 (279)
T ss_pred             -HHHhhCCEEEECCCcccccCH--HHcCCCcEEEEeecc
Confidence             223558999999997654443  347999999999865

>TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E

Probab=96.09  E-value=0.048  Score=46.22  Aligned_cols=34  Identities=24%  Similarity=0.451  Sum_probs=30.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      .+.+|+|+|+|++|..+++.+...|. ++++++..
T Consensus        20 ~~~~VlviG~GglGs~ia~~La~~Gv~~i~lvD~d   54 (202)
T TIGR02356        20 LNSHVLIIGAGGLGSPAALYLAGAGVGTIVIVDDD   54 (202)
T ss_pred             cCCCEEEECCCHHHHHHHHHHHHcCCCeEEEecCC
Confidence            45789999999999999999999998 88888866

coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli.

>PRK06841 short chain dehydrogenase; Provisional

Probab=96.09  E-value=0.048  Score=47.68  Aligned_cols=74  Identities=27%  Similarity=0.297  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-c---EEEeCCCHHHHHHh-------cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-D---KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~---~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      .+.++||+|+ |++|...++.+...|++|++++++.+..... ++... .   ...|..+.+.+.+.       .+++|+
T Consensus        14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~-~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~   92 (255)
T PRK06841         14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVA-AQLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI   92 (255)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence            4678999998 9999999998888999999999887654433 23321 1   12344444433322       257899


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++.+.|.
T Consensus        93 vi~~ag~   99 (255)
T PRK06841         93 LVNSAGV   99 (255)
T ss_pred             EEECCCC
Confidence            9998874

>PRK12747 short chain dehydrogenase; Provisional

Probab=96.08  E-value=0.12  Score=45.02  Aligned_cols=98  Identities=20%  Similarity=0.197  Sum_probs=59.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHHh---CCCcE---EEeCCCHHHHH----Hh------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALSL---LGADK---FVVSSDLEQMK----AL------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~----~~------  241 (344)
                      .+.++||+|+ +++|.++++.+...|++|++.. ++.++.+...++   .+...   ..|..+.+.+.    ++      
T Consensus         3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (252)
T PRK12747          3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   82 (252)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence            4678999997 9999999999999999998865 444444333222   23221   12333322111    11      


Q ss_pred             --c-CCccEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          242 --G-KSLDFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       242 --~-~~~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        + +++|+++++.|...                         ..+.++..++..|+++.++..
T Consensus        83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~  146 (252)
T PRK12747         83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA  146 (252)
T ss_pred             hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCc
Confidence              1 37999999887310                         112345556667999998765

>PRK06125 short chain dehydrogenase; Provisional

Probab=96.07  E-value=0.041  Score=48.36  Aligned_cols=75  Identities=23%  Similarity=0.315  Sum_probs=52.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---EEEeCCCHHHHHHh---cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---KFVVSSDLEQMKAL---GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~---~~~~dvv  248 (344)
                      .+.++||.|+ +++|...++.+...|++|++++++.++.+.+.+++    +..   ...|..+.+.+.+.   .+++|++
T Consensus         6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~l   85 (259)
T PRK06125          6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEAGDIDIL   85 (259)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHhCCCCEE
Confidence            4688999998 89999999988889999999999887665543322    322   12344454444332   2679999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        86 v~~ag~   91 (259)
T PRK06125         86 VNNAGA   91 (259)
T ss_pred             EECCCC
Confidence            998874

>PRK01581 speE spermidine synthase; Validated

Probab=96.06  E-value=0.4  Score=44.18  Aligned_cols=137  Identities=15%  Similarity=0.092  Sum_probs=77.0

Q ss_pred             CcceeEEEEecc-eEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEE
Q 019199          133 GGYSSYIVVHER-YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVL  210 (344)
Q Consensus       133 g~~~~~~~~~~~-~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~  210 (344)
                      -.||+..++... ..+-+...+-..+.--....-+-++-++..   .....+|||+|+| .|.++..+++..+. +|+++
T Consensus       105 S~yQ~I~I~et~~~~L~LDG~~Q~se~DE~iYHE~Lvhp~m~~---h~~PkrVLIIGgG-dG~tlrelLk~~~v~~It~V  180 (374)
T PRK01581        105 SNYQNINLLQVSDIRLYLDKQLQFSSVDEQIYHEALVHPIMSK---VIDPKRVLILGGG-DGLALREVLKYETVLHVDLV  180 (374)
T ss_pred             CCCceEEEEEcCCEEEEECCeeccccccHHHHHHHHHHHHHHh---CCCCCEEEEECCC-HHHHHHHHHhcCCCCeEEEE
Confidence            458887777643 333443333222222111111111212211   1344689999965 46677777776554 89999


Q ss_pred             eCCchhHHHHHHhCC------------C-cEEEeCCCHHHHHHhcCCccEEEECCCCc-----------hhHHHHHHhcc
Q 019199          211 STSTSKKEEALSLLG------------A-DKFVVSSDLEQMKALGKSLDFIIDTASGD-----------HPFDAYMSLLK  266 (344)
Q Consensus       211 ~~~~~~~~~~~~~~g------------~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~-----------~~~~~~~~~l~  266 (344)
                      +-+++-.+.++ ++.            . -.++..+..+.+.+..+.+|++|--...+           ..++.+.+.|+
T Consensus       181 EIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~Da~~fL~~~~~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~Lk  259 (374)
T PRK01581        181 DLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVCDAKEFLSSPSSLYDVIIIDFPDPATELLSTLYTSELFARIATFLT  259 (374)
T ss_pred             eCCHHHHHHHH-hccccchhccccCCCCceEEEECcHHHHHHhcCCCccEEEEcCCCccccchhhhhHHHHHHHHHHhcC
Confidence            99988888774 321            0 11222222344544456799987443222           23678888999


Q ss_pred             cCCEEEEE
Q 019199          267 VAGVYVLV  274 (344)
Q Consensus       267 ~~G~iv~~  274 (344)
                      |+|.++.-
T Consensus       260 PgGV~V~Q  267 (374)
T PRK01581        260 EDGAFVCQ  267 (374)
T ss_pred             CCcEEEEe
Confidence            99998765

>PRK08862 short chain dehydrogenase; Provisional

Probab=96.05  E-value=0.043  Score=47.39  Aligned_cols=74  Identities=11%  Similarity=0.109  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cC-C
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GK-S  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~-~  244 (344)
                      .|.+++|.|+ +++|.+.+..+...|++|+++.++.++++.+.+   +.+.+.   ..|..+.+.+.+.       -+ +
T Consensus         4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~   83 (227)
T PRK08862          4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA   83 (227)
T ss_pred             CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 899999998888899999999998887655433   334321   2344454443321       14 7


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|+++++.|
T Consensus        84 iD~li~nag   92 (227)
T PRK08862         84 PDVLVNNWT   92 (227)
T ss_pred             CCEEEECCc
Confidence            999999886

>COG2910 Putative NADH-flavin reductase [General function prediction only]

Probab=96.05  E-value=0.059  Score=44.22  Aligned_cols=92  Identities=23%  Similarity=0.260  Sum_probs=63.5

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE--eCCCHHHHHHhcCCccEEEECCCCc--h-
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--VSSDLEQMKALGKSLDFIIDTASGD--H-  256 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v--~~~~~~~~~~~~~~~dvvid~~g~~--~-  256 (344)
                      ++.|+|+ |-+|...++-|+..|-.|+++++++++.... +  +. .++  |--+.+.+.+.-.++|+||++.+..  . 
T Consensus         2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~-~--~~-~i~q~Difd~~~~a~~l~g~DaVIsA~~~~~~~~   77 (211)
T COG2910           2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAAR-Q--GV-TILQKDIFDLTSLASDLAGHDAVISAFGAGASDN   77 (211)
T ss_pred             eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhcccc-c--cc-eeecccccChhhhHhhhcCCceEEEeccCCCCCh
Confidence            4778888 9999999999999999999999999887543 1  21 111  1123334444557899999998865  1 


Q ss_pred             ------hHHHHHHhcccC--CEEEEEcCCC
Q 019199          257 ------PFDAYMSLLKVA--GVYVLVGFPS  278 (344)
Q Consensus       257 ------~~~~~~~~l~~~--G~iv~~g~~~  278 (344)
                            ..+.++..|+.-  .|++.+|.-+
T Consensus        78 ~~~~~k~~~~li~~l~~agv~RllVVGGAG  107 (211)
T COG2910          78 DELHSKSIEALIEALKGAGVPRLLVVGGAG  107 (211)
T ss_pred             hHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence                  133466667663  5788787553

>PRK07069 short chain dehydrogenase; Validated

Probab=96.04  E-value=0.16  Score=44.12  Aligned_cols=71  Identities=20%  Similarity=0.225  Sum_probs=48.0

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHhC----CCc----EEEeCCCHHHHHHh-------cCCcc
Q 019199          184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALSLL----GAD----KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~~~----g~~----~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      ++|+|+ |++|...++.+...|++|++++++ .++.+.+.+++    +..    ...|..+.+.+.+.       .+++|
T Consensus         2 ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   81 (251)
T PRK07069          2 AFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGLS   81 (251)
T ss_pred             EEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCcc
Confidence            788887 999999998888889999999987 55554443332    211    12355555443322       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++.+.|.
T Consensus        82 ~vi~~ag~   89 (251)
T PRK07069         82 VLVNNAGV   89 (251)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK08017 oxidoreductase; Provisional

Probab=96.03  E-value=0.059  Score=47.12  Aligned_cols=72  Identities=21%  Similarity=0.176  Sum_probs=52.6

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHH----h----cCCccEEEEC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKA----L----GKSLDFIIDT  251 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~----~----~~~~dvvid~  251 (344)
                      +++||+|+ |++|.++++.+...|++|++++++.++.+.+ +..+.+. ..|..+.+.+..    .    .+.+|.++.+
T Consensus         3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~   81 (256)
T PRK08017          3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARM-NSLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN   81 (256)
T ss_pred             CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHH-HhCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence            47999998 9999999999999999999999998887776 4566543 234445433222    1    2567888888


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        82 ag~   84 (256)
T PRK08017         82 AGF   84 (256)
T ss_pred             CCC
Confidence            763

>TIGR00438 rrmJ cell division protein FtsJ

Probab=96.03  E-value=0.12  Score=43.27  Aligned_cols=96  Identities=20%  Similarity=0.241  Sum_probs=58.2

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEE-EeCCCHHHH---HH-h-cCCccE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQM---KA-L-GKSLDF  247 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~---~~-~-~~~~dv  247 (344)
                      ...+++|++||.+|+|+-+.+.....+..+ .+|++++.++.+     ...+...+ .|..+....   .+ . .+++|+
T Consensus        27 ~~~i~~g~~VLDiG~GtG~~~~~l~~~~~~~~~v~~vDis~~~-----~~~~i~~~~~d~~~~~~~~~l~~~~~~~~~D~  101 (188)
T TIGR00438        27 FKLIKPGDTVLDLGAAPGGWSQVAVEQVGGKGRVIAVDLQPMK-----PIENVDFIRGDFTDEEVLNKIRERVGDDKVDV  101 (188)
T ss_pred             hcccCCCCEEEEecCCCCHHHHHHHHHhCCCceEEEEeccccc-----cCCCceEEEeeCCChhHHHHHHHHhCCCCccE
Confidence            445589999999998765544333333333 489999988754     11233321 233332222   22 2 257999


Q ss_pred             EEEC-C----CC------------chhHHHHHHhcccCCEEEEEc
Q 019199          248 IIDT-A----SG------------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       248 vid~-~----g~------------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |+.. .    |.            ...+..+.+.|+|+|+++...
T Consensus       102 V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~  146 (188)
T TIGR00438       102 VMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV  146 (188)
T ss_pred             EEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence            9952 2    21            235778899999999998864

>PRK08340 glucose-1-dehydrogenase; Provisional

Probab=96.02  E-value=0.042  Score=48.30  Aligned_cols=72  Identities=24%  Similarity=0.195  Sum_probs=50.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHh-------cCCccEEE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      ++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++   +..  ...|..+.+.+.+.       .+++|+++
T Consensus         2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li   81 (259)
T PRK08340          2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV   81 (259)
T ss_pred             eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence            5899987 99999999988889999999999887765543332   311  12344454433322       25799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        82 ~naG~   86 (259)
T PRK08340         82 WNAGN   86 (259)
T ss_pred             ECCCC
Confidence            98874

>PRK10669 putative cation:proton antiport protein; Provisional

Probab=95.99  E-value=0.082  Score=52.23  Aligned_cols=92  Identities=15%  Similarity=0.126  Sum_probs=67.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchh--
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP--  257 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~--  257 (344)
                      ++++|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...+. |..+++.+++.. +++|.++-++++...  
T Consensus       418 ~hiiI~G~G~~G~~la~~L~~~g~~vvvId~d~~~~~~~-~~~g~~~i~GD~~~~~~L~~a~i~~a~~viv~~~~~~~~~  496 (558)
T PRK10669        418 NHALLVGYGRVGSLLGEKLLAAGIPLVVIETSRTRVDEL-RERGIRAVLGNAANEEIMQLAHLDCARWLLLTIPNGYEAG  496 (558)
T ss_pred             CCEEEECCChHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHCCCeEEEcCCCCHHHHHhcCccccCEEEEEcCChHHHH
Confidence            678999999999999999999999999999999999888 567765444 345566666654 789988877765432  


Q ss_pred             -HHHHHHhcccCCEEEEE
Q 019199          258 -FDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       258 -~~~~~~~l~~~G~iv~~  274 (344)
                       .-...+...+..+++..
T Consensus       497 ~iv~~~~~~~~~~~iiar  514 (558)
T PRK10669        497 EIVASAREKRPDIEIIAR  514 (558)
T ss_pred             HHHHHHHHHCCCCeEEEE
Confidence             22233445556666655

>PRK06483 dihydromonapterin reductase; Provisional

Probab=95.98  E-value=0.056  Score=46.72  Aligned_cols=74  Identities=23%  Similarity=0.108  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHH----h---cCCccEEEEC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKA----L---GKSLDFIIDT  251 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~----~---~~~~dvvid~  251 (344)
                      +.++||.|+ +++|.+.++.+...|++|+++++++++.....+..+... ..|..+.+.+.+    .   .+++|+++++
T Consensus         2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~~   81 (236)
T PRK06483          2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLRQAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIHN   81 (236)
T ss_pred             CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHHcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEEC
Confidence            457999998 999999999988899999999988765433324455321 234444433322    1   2569999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        82 ag~   84 (236)
T PRK06483         82 ASD   84 (236)
T ss_pred             Ccc
Confidence            874

>PRK14176 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.98  E-value=0.08  Score=47.04  Aligned_cols=95  Identities=16%  Similarity=0.165  Sum_probs=72.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      ..||+....+..+.....--.|.+++|+|. ..+|.-+..++...|+.|++.......+.                    
T Consensus       143 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrs~iVGkPla~lL~~~~atVtv~hs~T~~l~--------------------  202 (287)
T PRK14176        143 LVPCTPHGVIRALEEYGVDIEGKNAVIVGHSNVVGKPMAAMLLNRNATVSVCHVFTDDLK--------------------  202 (287)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCEEEEEeccCCCHH--------------------
Confidence            467766666666766655468999999998 57999999999999999999885433222                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++.++|.+..+  --+.++++..++++|..
T Consensus       203 -~~~~~ADIvv~AvG~p~~i--~~~~vk~gavVIDvGin  238 (287)
T PRK14176        203 -KYTLDADILVVATGVKHLI--KADMVKEGAVIFDVGIT  238 (287)
T ss_pred             -HHHhhCCEEEEccCCcccc--CHHHcCCCcEEEEeccc
Confidence             2235689999999988744  34589999999999874

>PLN02233 ubiquinone biosynthesis methyltransferase

Probab=95.97  E-value=0.07  Score=47.17  Aligned_cols=100  Identities=16%  Similarity=0.080  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhCC------C-cEEEeCCCHHHHHHhcCCccE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLG------A-DKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~g------~-~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      .++++++||-+|+|+ |..+..+++..+  .+|++++.+++.++.+.++..      . ..-+...+...+.-..+.+|+
T Consensus        70 ~~~~~~~VLDlGcGt-G~~~~~la~~~~~~~~V~gvD~S~~ml~~A~~r~~~~~~~~~~~i~~~~~d~~~lp~~~~sfD~  148 (261)
T PLN02233         70 GAKMGDRVLDLCCGS-GDLAFLLSEKVGSDGKVMGLDFSSEQLAVAASRQELKAKSCYKNIEWIEGDATDLPFDDCYFDA  148 (261)
T ss_pred             CCCCCCEEEEECCcC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHhhhhhhccCCCeEEEEcccccCCCCCCCEeE
Confidence            347899999999864 556777777765  489999999998887744322      1 111111111111111245899


Q ss_pred             EEECCCC------chhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASG------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+-..+-      ...++++.+.|+|+|+++.+.+.
T Consensus       149 V~~~~~l~~~~d~~~~l~ei~rvLkpGG~l~i~d~~  184 (261)
T PLN02233        149 ITMGYGLRNVVDRLKAMQEMYRVLKPGSRVSILDFN  184 (261)
T ss_pred             EEEecccccCCCHHHHHHHHHHHcCcCcEEEEEECC
Confidence            8754321      23478899999999999888655

>PRK07067 sorbitol dehydrogenase; Provisional

Probab=95.97  E-value=0.053  Score=47.56  Aligned_cols=75  Identities=16%  Similarity=0.201  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|...++.+...|++|++++++.++.+.+.++.+...   ..|-.+.+.+.+.       .+++|++
T Consensus         5 ~~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~l   84 (257)
T PRK07067          5 QGKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDIL   84 (257)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 999999999998899999999999887766644544221   2233444333221       2578999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +.+.+.
T Consensus        85 i~~ag~   90 (257)
T PRK07067         85 FNNAAL   90 (257)
T ss_pred             EECCCc
Confidence            998763

>TIGR01318 gltD_gamma_fam glutamate synthase small subunit family protein, proteobacterial

Probab=95.96  E-value=0.027  Score=54.32  Aligned_cols=77  Identities=18%  Similarity=0.241  Sum_probs=54.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc---------------------hhHHHHHHhCCCcEEEeCCCH-H
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST---------------------SKKEEALSLLGADKFVVSSDL-E  236 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~---------------------~~~~~~~~~~g~~~~v~~~~~-~  236 (344)
                      ..+++|+|+|+|..|+.++..++..|.+|++++..+                     .+.+.+ +++|.+..++..-. +
T Consensus       139 ~~~~~V~IIG~GpaGl~aA~~l~~~G~~V~i~e~~~~~gG~l~~gip~~~~~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~  217 (467)
T TIGR01318       139 PTGKRVAVIGAGPAGLACADILARAGVQVVVFDRHPEIGGLLTFGIPSFKLDKAVLSRRREIF-TAMGIEFHLNCEVGRD  217 (467)
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHcCCeEEEEecCCCCCceeeecCccccCCHHHHHHHHHHH-HHCCCEEECCCEeCCc
Confidence            468899999999999999999999999999888654                     133444 67887654443211 1


Q ss_pred             -HHHHhcCCccEEEECCCCch
Q 019199          237 -QMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       237 -~~~~~~~~~dvvid~~g~~~  256 (344)
                       .......++|.+|.++|...
T Consensus       218 ~~~~~~~~~~D~vilAtGa~~  238 (467)
T TIGR01318       218 ISLDDLLEDYDAVFLGVGTYR  238 (467)
T ss_pred             cCHHHHHhcCCEEEEEeCCCC
Confidence             11222346999999999753

This model represents one of three built for the NADPH-dependent or NADH-dependent glutamate synthase (EC 1.4.1.13 and 1.4.1.14, respectively) small subunit and homologs. TIGR01317 describes the small subunit (or equivalent region from longer forms) in eukaryotes, Gram-positive bacteria, and some other lineages, both NADH and NADPH-dependent. TIGR01316 describes a protein of similar length, from Archaea and a number of bacterial lineages, that forms glutamate synthase homotetramers without a large subunit. This model describes both glutatate synthase small subunit and closely related paralogs of unknown function from a number of gamma and alpha subdivision Proteobacteria, including E. coli.

>PRK06197 short chain dehydrogenase; Provisional

Probab=95.96  E-value=0.034  Score=50.32  Aligned_cols=75  Identities=27%  Similarity=0.321  Sum_probs=51.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc---EEEeCCCHHHHHHh-------c
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD---KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~v~~~~~~~~~~~-------~  242 (344)
                      ..|.++||+|+ |++|..+++.+...|++|++++++.++.+.+.+++     +..   ..+|-.+.+.+.+.       .
T Consensus        14 ~~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~   93 (306)
T PRK06197         14 QSGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAY   93 (306)
T ss_pred             CCCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhC
Confidence            36788999998 99999999988888999999999877654432222     111   12344454433322       2


Q ss_pred             CCccEEEECCC
Q 019199          243 KSLDFIIDTAS  253 (344)
Q Consensus       243 ~~~dvvid~~g  253 (344)
                      +++|++|.+.|
T Consensus        94 ~~iD~li~nAg  104 (306)
T PRK06197         94 PRIDLLINNAG  104 (306)
T ss_pred             CCCCEEEECCc
Confidence            57899999887

>PRK06719 precorrin-2 dehydrogenase; Validated

Probab=95.96  E-value=0.03  Score=45.35  Aligned_cols=89  Identities=18%  Similarity=0.040  Sum_probs=58.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|+|+|+|.+|..-++.+...|++|++++  ++..+.+ ++++... +..+..+  ..-..++|+|+-+++... .
T Consensus        11 l~~~~vlVvGGG~va~rka~~Ll~~ga~V~VIs--p~~~~~l-~~l~~i~-~~~~~~~--~~dl~~a~lViaaT~d~e-~   83 (157)
T PRK06719         11 LHNKVVVIIGGGKIAYRKASGLKDTGAFVTVVS--PEICKEM-KELPYIT-WKQKTFS--NDDIKDAHLIYAATNQHA-V   83 (157)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEc--CccCHHH-HhccCcE-EEecccC--hhcCCCceEEEECCCCHH-H
Confidence            467889999999999998988888999999884  4434444 3444222 2222111  111257999999998887 7


Q ss_pred             HHHHHhcccCCEEEEE
Q 019199          259 DAYMSLLKVAGVYVLV  274 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~  274 (344)
                      +..+...+..+.++..
T Consensus        84 N~~i~~~a~~~~~vn~   99 (157)
T PRK06719         84 NMMVKQAAHDFQWVNV   99 (157)
T ss_pred             HHHHHHHHHHCCcEEE
Confidence            7777766555444443

>PRK08643 acetoin reductase; Validated

Probab=95.94  E-value=0.049  Score=47.68  Aligned_cols=74  Identities=23%  Similarity=0.225  Sum_probs=51.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~d  246 (344)
                      +.++||+|+ |++|...++.+...|++|++++++.++.+.+.+++   +...   ..|..+++.+.+.       .+++|
T Consensus         2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   81 (256)
T PRK08643          2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN   81 (256)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            567899987 99999999999889999999998877655443332   3221   2244454433221       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|.+.|.
T Consensus        82 ~vi~~ag~   89 (256)
T PRK08643         82 VVVNNAGV   89 (256)
T ss_pred             EEEECCCC
Confidence            99998864

>PRK06482 short chain dehydrogenase; Provisional

Probab=95.94  E-value=0.067  Score=47.48  Aligned_cols=73  Identities=16%  Similarity=0.150  Sum_probs=52.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEEE
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .++||+|+ |.+|...++.+...|++|+++.++.++.+.+.+..+...   ..|..+.+.+.+.       .+++|++|.
T Consensus         3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~   82 (276)
T PRK06482          3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS   82 (276)
T ss_pred             CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            46899987 999999999888899999999999887766644444321   2344554433321       257899999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        83 ~ag~   86 (276)
T PRK06482         83 NAGY   86 (276)
T ss_pred             CCCC
Confidence            8874

>PRK08213 gluconate 5-dehydrogenase; Provisional

Probab=95.94  E-value=0.057  Score=47.40  Aligned_cols=76  Identities=25%  Similarity=0.268  Sum_probs=53.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      -.+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+.+   +..   ...|..+.+.+.+.       .++
T Consensus        10 ~~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~   89 (259)
T PRK08213         10 LSGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGH   89 (259)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35688999997 99999999999889999999999887765553322   222   22345555444221       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++.+.|.
T Consensus        90 id~vi~~ag~   99 (259)
T PRK08213         90 VDILVNNAGA   99 (259)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK07035 short chain dehydrogenase; Provisional

Probab=95.93  E-value=0.052  Score=47.44  Aligned_cols=75  Identities=25%  Similarity=0.311  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+.++++.++.+.+.++   .+..   ...|..+.+.+.+.       .+.+
T Consensus         7 ~~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   86 (252)
T PRK07035          7 TGKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRL   86 (252)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4578999997 9999999999998999999999987766554333   2321   12244444433221       2568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.+.
T Consensus        87 d~li~~ag~   95 (252)
T PRK07035         87 DILVNNAAA   95 (252)
T ss_pred             CEEEECCCc
Confidence            999988873

>PRK14967 putative methyltransferase; Provisional

Probab=95.93  E-value=0.17  Score=43.54  Aligned_cols=126  Identities=23%  Similarity=0.228  Sum_probs=75.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHH---hCCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALS---LLGADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ++++++||-.|+|. |..++.+++. ++ +|+.++.+++..+.+++   ..+....+...+.... ...+.+|+|+...+
T Consensus        34 ~~~~~~vLDlGcG~-G~~~~~la~~-~~~~v~~vD~s~~~l~~a~~n~~~~~~~~~~~~~d~~~~-~~~~~fD~Vi~npP  110 (223)
T PRK14967         34 LGPGRRVLDLCTGS-GALAVAAAAA-GAGSVTAVDISRRAVRSARLNALLAGVDVDVRRGDWARA-VEFRPFDVVVSNPP  110 (223)
T ss_pred             cCCCCeEEEecCCH-HHHHHHHHHc-CCCeEEEEECCHHHHHHHHHHHHHhCCeeEEEECchhhh-ccCCCeeEEEECCC
Confidence            47889999999986 8888888875 56 99999999887665432   2343222222222111 11357999987532


Q ss_pred             Cc---------------------------hhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCC
Q 019199          254 GD---------------------------HPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHK  306 (344)
Q Consensus       254 ~~---------------------------~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  306 (344)
                      ..                           ..+..+.+.|+++|+++.+-...              ..+.++++++.+..
T Consensus       111 y~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~Lk~gG~l~~~~~~~--------------~~~~~~~~~l~~~g  176 (223)
T PRK14967        111 YVPAPPDAPPSRGPARAWDAGPDGRAVLDRLCDAAPALLAPGGSLLLVQSEL--------------SGVERTLTRLSEAG  176 (223)
T ss_pred             CCCCCcccccccChhHhhhCCCcHHHHHHHHHHHHHHhcCCCcEEEEEEecc--------------cCHHHHHHHHHHCC
Confidence            11                           12456778999999998662221              02346667776666


Q ss_pred             Cccc--e-EEEeCccHH
Q 019199          307 IYPQ--I-ETIPIENVN  320 (344)
Q Consensus       307 ~~~~--~-~~~~~~~~~  320 (344)
                      +...  . +.+++....
T Consensus       177 ~~~~~~~~~~~~~~~~~  193 (223)
T PRK14967        177 LDAEVVASQWIPFGPVL  193 (223)
T ss_pred             CCeEEEEeeccCccHHH
Confidence            5432  2 445665433

>PRK13255 thiopurine S-methyltransferase; Reviewed

Probab=95.92  E-value=0.057  Score=46.33  Aligned_cols=95  Identities=18%  Similarity=0.085  Sum_probs=60.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE----------------EeCCCH-HHHHHh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF----------------VVSSDL-EQMKAL  241 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~----------------v~~~~~-~~~~~~  241 (344)
                      .++.+||+.|+| .|.-++.+|+ .|++|++++-++.-.+.+.++.+....                +...+. +.....
T Consensus        36 ~~~~rvL~~gCG-~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~D~~~l~~~~  113 (218)
T PRK13255         36 PAGSRVLVPLCG-KSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCGDFFALTAAD  113 (218)
T ss_pred             CCCCeEEEeCCC-ChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEECcccCCCccc
Confidence            567899999987 3777777775 799999999998877765444442110                000000 000011


Q ss_pred             cCCccEEEECCCC--------chhHHHHHHhcccCCEEEEEc
Q 019199          242 GKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       242 ~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ...+|.++|...-        ...+..+.+.|+|+|+++.+.
T Consensus       114 ~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~~  155 (218)
T PRK13255        114 LADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLVT  155 (218)
T ss_pred             CCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEEE
Confidence            2468999985531        123778888999999866543

>PRK06138 short chain dehydrogenase; Provisional

Probab=95.92  E-value=0.047  Score=47.56  Aligned_cols=75  Identities=23%  Similarity=0.253  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--CCc-E--EEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-K--FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~--~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |.+|...++.+...|++|++++++.++.....+..  +.. .  ..|..+++.+.+.       .+++|
T Consensus         4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id   83 (252)
T PRK06138          4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD   83 (252)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999998 99999999988888999999999887665543333  321 1  2244454443332       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++.+.|.
T Consensus        84 ~vi~~ag~   91 (252)
T PRK06138         84 VLVNNAGF   91 (252)
T ss_pred             EEEECCCC
Confidence            99998874

>PRK12937 short chain dehydrogenase; Provisional

Probab=95.91  E-value=0.35  Score=41.81  Aligned_cols=99  Identities=17%  Similarity=0.148  Sum_probs=61.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEAL---SLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      .++.++||+|+ |++|...+..+...|++++++.++.+. .+...   +..+...   ..|-.+.+.+.+.       .+
T Consensus         3 ~~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   82 (245)
T PRK12937          3 LSNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFG   82 (245)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35678999987 999999999999999998877765432 22221   2234221   1244444433222       25


Q ss_pred             CccEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|++|.+.|...                         .++.+++.++..|+++.++..
T Consensus        83 ~id~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~  141 (245)
T PRK12937         83 RIDVLVNNAGVMPLGTIADFDLEDFDRTIATNLRGAFVVLREAARHLGQGGRIINLSTS  141 (245)
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHHhccCcEEEEEeec
Confidence            7999999887421                         122334455567899988754

>PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed

Probab=95.91  E-value=0.089  Score=44.86  Aligned_cols=97  Identities=22%  Similarity=0.166  Sum_probs=60.5

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ...++++++||-+|+|. |..+..+++.. .+|+.++.+++..+.+.+.   .+..  .++..+..+... ..+.||+++
T Consensus        73 ~l~~~~~~~VLeiG~Gs-G~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~-~~~~fD~I~  149 (212)
T PRK00312         73 LLELKPGDRVLEIGTGS-GYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHNVSVRHGDGWKGWP-AYAPFDRIL  149 (212)
T ss_pred             hcCCCCCCEEEEECCCc-cHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCceEEEECCcccCCC-cCCCcCEEE
Confidence            34458899999999863 55555666654 4899999888766555433   3432  112111111110 125699988


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEE
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      -..........+.+.|+++|+++..
T Consensus       150 ~~~~~~~~~~~l~~~L~~gG~lv~~  174 (212)
T PRK00312        150 VTAAAPEIPRALLEQLKEGGILVAP  174 (212)
T ss_pred             EccCchhhhHHHHHhcCCCcEEEEE
Confidence            6555444467888999999998755

>PRK07774 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.053  Score=47.21  Aligned_cols=75  Identities=24%  Similarity=0.280  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |.+|...++.+...|++|++++++++....+.+++   +..   ...|..+.+.+.+.       .+++
T Consensus         5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   84 (250)
T PRK07774          5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI   84 (250)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 99999999988889999999998876544332222   221   22344454433221       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (250)
T PRK07774         85 DYLVNNAAI   93 (250)
T ss_pred             CEEEECCCC
Confidence            999998884

>PRK06701 short chain dehydrogenase; Provisional

Probab=95.90  E-value=0.35  Score=43.36  Aligned_cols=76  Identities=18%  Similarity=0.157  Sum_probs=49.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEA---LSLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~---~~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.+.++||+|+ |++|...+..+...|++|+++.++.++ .+..   .+..|...   ..|..+.+.+.+.       .+
T Consensus        44 ~~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~  123 (290)
T PRK06701         44 LKGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELG  123 (290)
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            45678999998 999999998888889999998877532 2222   12234322   2244444433221       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|.+.|.
T Consensus       124 ~iD~lI~~Ag~  134 (290)
T PRK06701        124 RLDILVNNAAF  134 (290)
T ss_pred             CCCEEEECCcc
Confidence            78999988774

>PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.90  E-value=0.081  Score=46.33  Aligned_cols=75  Identities=16%  Similarity=0.187  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      .|.++||+|+ +++|.+.++.+...|++|+++++++. +.....++.+...   .+|-.+.+.+.+.       .+++|+
T Consensus         7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD~   86 (251)
T PRK12481          7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVEALGRKFHFITADLIQQKDIDSIVSQAVEVMGHIDI   86 (251)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999998 99999999999899999998876543 2222223445322   2355555443332       257999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        87 lv~~ag~   93 (251)
T PRK12481         87 LINNAGI   93 (251)
T ss_pred             EEECCCc
Confidence            9998873

>PRK14172 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.89  E-value=0.098  Score=46.30  Aligned_cols=95  Identities=20%  Similarity=0.220  Sum_probs=72.5

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..+.....--.|.+++|+|. ..+|.-+..++...|+.|++..+....+.                    
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~AtVt~chs~T~~l~--------------------  196 (278)
T PRK14172        137 FLPCTPNSVITLIKSLNIDIEGKEVVVIGRSNIVGKPVAQLLLNENATVTICHSKTKNLK--------------------  196 (278)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            467766666666666554468999999997 89999999999999999998876543332                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       197 -~~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin  232 (278)
T PRK14172        197 -EVCKKADILVVAIGRPKFID--EEYVKEGAIVIDVGTS  232 (278)
T ss_pred             -HHHhhCCEEEEcCCCcCccC--HHHcCCCcEEEEeecc
Confidence             22355899999999887433  4669999999999865

>PRK12475 thiamine/molybdopterin biosynthesis MoeB-like protein; Provisional

Probab=95.89  E-value=0.054  Score=49.74  Aligned_cols=82  Identities=22%  Similarity=0.313  Sum_probs=52.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc---------------------hhHHHH---HHhCCCcEEE---e
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST---------------------SKKEEA---LSLLGADKFV---V  231 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~---------------------~~~~~~---~~~~g~~~~v---~  231 (344)
                      .+.+|+|+|+|++|..++..+...|. ++++++...                     .|.+.+   .+++..+..+   .
T Consensus        23 ~~~~VlIiG~GglGs~va~~La~aGvg~i~lvD~D~ve~sNL~RQ~l~~~~d~~~g~~Ka~aa~~~l~~inp~v~i~~~~  102 (338)
T PRK12475         23 REKHVLIVGAGALGAANAEALVRAGIGKLTIADRDYVEWSNLQRQQLYTEEDAKQKKPKAIAAKEHLRKINSEVEIVPVV  102 (338)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCcccccccCccccccHHHccCCccHHHHHHHHHHHHCCCcEEEEEe
Confidence            44779999999999999999999998 888888763                     111111   1233322111   1


Q ss_pred             -CCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          232 -SSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       232 -~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                       .-..+.+.+...++|+|+|+..+.. .+..+
T Consensus       103 ~~~~~~~~~~~~~~~DlVid~~D~~~-~r~~i  133 (338)
T PRK12475        103 TDVTVEELEELVKEVDLIIDATDNFD-TRLLI  133 (338)
T ss_pred             ccCCHHHHHHHhcCCCEEEEcCCCHH-HHHHH
Confidence             1123344555678999999998765 33333

>PLN02366 spermidine synthase

Probab=95.88  E-value=0.11  Score=46.99  Aligned_cols=95  Identities=16%  Similarity=0.205  Sum_probs=61.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHh-cCCccE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKAL-GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~-~~~~dv  247 (344)
                      ...++||++|+|. |..+..+++.-+. +|.+++-+++-.+.+++.++.         -.++..+....+++. .+.+|+
T Consensus        90 ~~pkrVLiIGgG~-G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~Da~~~l~~~~~~~yDv  168 (308)
T PLN02366         90 PNPKKVLVVGGGD-GGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIGDGVEFLKNAPEGTYDA  168 (308)
T ss_pred             CCCCeEEEEcCCc-cHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEChHHHHHhhccCCCCCE
Confidence            4568899998764 5567777887665 888888887766666443431         112222223344444 357999


Q ss_pred             EEECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199          248 IIDTASG----------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       248 vid~~g~----------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +|--...          ...++.+.+.|+++|.++.-
T Consensus       169 Ii~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~q  205 (308)
T PLN02366        169 IIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCTQ  205 (308)
T ss_pred             EEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEC
Confidence            8753322          12377888999999999754

>PRK03562 glutathione-regulated potassium-efflux system protein KefC; Provisional

Probab=95.88  E-value=0.062  Score=53.64  Aligned_cols=94  Identities=13%  Similarity=0.197  Sum_probs=71.0

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchhH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPF  258 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~~  258 (344)
                      .++|+|.|.|.+|+..++.++..|.++++++.++++.+.+ ++.|...++ |..+++.+++.+ .++|.++-+++++..-
T Consensus       400 ~~~vII~G~Gr~G~~va~~L~~~g~~vvvID~d~~~v~~~-~~~g~~v~~GDat~~~~L~~agi~~A~~vvv~~~d~~~n  478 (621)
T PRK03562        400 QPRVIIAGFGRFGQIVGRLLLSSGVKMTVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQTS  478 (621)
T ss_pred             cCcEEEEecChHHHHHHHHHHhCCCCEEEEECCHHHHHHH-HhcCCeEEEEeCCCHHHHHhcCCCcCCEEEEEeCCHHHH
Confidence            3679999999999999999999999999999999999988 577865433 456677777664 6799999988875422


Q ss_pred             ---HHHHHhcccCCEEEEEc
Q 019199          259 ---DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       259 ---~~~~~~l~~~G~iv~~g  275 (344)
                         ....+.+.|.-+++...
T Consensus       479 ~~i~~~ar~~~p~~~iiaRa  498 (621)
T PRK03562        479 LQLVELVKEHFPHLQIIARA  498 (621)
T ss_pred             HHHHHHHHHhCCCCeEEEEE
Confidence               23344555666666544

>PRK06172 short chain dehydrogenase; Provisional

Probab=95.87  E-value=0.055  Score=47.30  Aligned_cols=75  Identities=24%  Similarity=0.237  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|...++.+...|++|++++++.++.+.+.+   ..+...   ..|..+.+.+.+.       .+++
T Consensus         6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i   85 (253)
T PRK06172          6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL   85 (253)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 999999999888899999999998776544322   233221   2344444333221       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        86 d~li~~ag~   94 (253)
T PRK06172         86 DYAFNNAGI   94 (253)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK00811 spermidine synthase; Provisional

Probab=95.85  E-value=0.13  Score=45.98  Aligned_cols=95  Identities=20%  Similarity=0.272  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC-------c---EEEeCCCHHHHHHhcCCccE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA-------D---KFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~-------~---~~v~~~~~~~~~~~~~~~dv  247 (344)
                      ...++||++|+|. |..+..+++..+. +|++++-+++-.+.+++.+..       +   .++..+....+....+.+|+
T Consensus        75 ~~p~~VL~iG~G~-G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDv  153 (283)
T PRK00811         75 PNPKRVLIIGGGD-GGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIGDGIKFVAETENSFDV  153 (283)
T ss_pred             CCCCEEEEEecCc-hHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEECchHHHHhhCCCcccE
Confidence            3467899999764 6677777777665 899999999888777544431       1   22223333444444467999


Q ss_pred             EEECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199          248 IIDTASG----------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       248 vid~~g~----------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ++--...          ...++.+.+.|+++|.++.-
T Consensus       154 Ii~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~  190 (283)
T PRK00811        154 IIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ  190 (283)
T ss_pred             EEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence            9753321          12256778899999999864

>KOG0069 consensus Glyoxylate/hydroxypyruvate reductase (D-isomer-specific 2-hydroxy acid dehydrogenase superfamily) [Energy production and conversion]

Probab=95.84  E-value=0.087  Score=47.80  Aligned_cols=108  Identities=24%  Similarity=0.294  Sum_probs=74.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEE-ECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII-DTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvi-d~~g~~~~  257 (344)
                      ..|++|.|+|.|.+|++.++.++.+|+.+....+...+.+.+ .++++..+       ...++..+.|+++ .+..++.|
T Consensus       160 ~~gK~vgilG~G~IG~~ia~rL~~Fg~~i~y~~r~~~~~~~~-~~~~~~~~-------d~~~~~~~sD~ivv~~pLt~~T  231 (336)
T KOG0069|consen  160 LEGKTVGILGLGRIGKAIAKRLKPFGCVILYHSRTQLPPEEA-YEYYAEFV-------DIEELLANSDVIVVNCPLTKET  231 (336)
T ss_pred             ccCCEEEEecCcHHHHHHHHhhhhccceeeeecccCCchhhH-HHhccccc-------CHHHHHhhCCEEEEecCCCHHH
Confidence            468999999999999999999999996666666666666666 46665511       1223335688875 44445543


Q ss_pred             H----HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          258 F----DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       258 ~----~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                      -    ...+..+++++.+|.++-.             ..-+.+++.+.+.+|++
T Consensus       232 ~~liNk~~~~~mk~g~vlVN~aRG-------------~iide~~l~eaL~sG~i  272 (336)
T KOG0069|consen  232 RHLINKKFIEKMKDGAVLVNTARG-------------AIIDEEALVEALKSGKI  272 (336)
T ss_pred             HHHhhHHHHHhcCCCeEEEecccc-------------ccccHHHHHHHHhcCCc
Confidence            2    3567789999999988633             11235677888888877

>PRK14177 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.83  E-value=0.1  Score=46.26  Aligned_cols=95  Identities=16%  Similarity=0.199  Sum_probs=72.8

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..+.....--.|.+++|+|. ..+|.-+.+++...|+.|++..+....+..                   
T Consensus       138 ~~PcTp~avi~ll~~y~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVt~chs~T~~l~~-------------------  198 (284)
T PRK14177        138 YLPCTPYGMVLLLKEYGIDVTGKNAVVVGRSPILGKPMAMLLTEMNATVTLCHSKTQNLPS-------------------  198 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHHH-------------------
Confidence            467766666666665555468999999997 899999999999999999988765443322                   


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        ..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       199 --~~~~ADIvIsAvGk~~~i~--~~~ik~gavVIDvGin  233 (284)
T PRK14177        199 --IVRQADIIVGAVGKPEFIK--ADWISEGAVLLDAGYN  233 (284)
T ss_pred             --HHhhCCEEEEeCCCcCccC--HHHcCCCCEEEEecCc
Confidence              2355999999999887332  6789999999999975

>PRK07074 short chain dehydrogenase; Provisional

Probab=95.83  E-value=0.083  Score=46.28  Aligned_cols=74  Identities=20%  Similarity=0.200  Sum_probs=52.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---Cc-EEEeCCCHHHHHHh-------cCCccEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---AD-KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~-~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      +.++||+|+ |.+|...+..+...|++|++++++.++.+.+.+.+.   .. ...|..+.+.+.+.       .+++|++
T Consensus         2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v   81 (257)
T PRK07074          2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL   81 (257)
T ss_pred             CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            467999998 999999998888889999999998887766544442   11 12345555444322       1468999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +.+.|.
T Consensus        82 i~~ag~   87 (257)
T PRK07074         82 VANAGA   87 (257)
T ss_pred             EECCCC
Confidence            998874

>PRK12938 acetyacetyl-CoA reductase; Provisional

Probab=95.82  E-value=0.25  Score=42.86  Aligned_cols=74  Identities=22%  Similarity=0.224  Sum_probs=47.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHH---HhCCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEAL---SLLGADKF---VVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~---~~~g~~~~---v~~~~~~~~~~~-------~~~~  245 (344)
                      +.++||+|+ |++|...++.+...|++|++..+ +..+.....   +..+....   .|..+.+.+.+.       .+++
T Consensus         3 ~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   82 (246)
T PRK12938          3 QRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGEI   82 (246)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence            578899997 99999999999999998877543 333322221   23343322   344554433221       2679


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        83 d~li~~ag~   91 (246)
T PRK12938         83 DVLVNNAGI   91 (246)
T ss_pred             CEEEECCCC
Confidence            999999875

>PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional

Probab=95.82  E-value=0.12  Score=45.60  Aligned_cols=95  Identities=19%  Similarity=0.221  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHH-HhcCCccEEEECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMK-ALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~-~~~~~~dvvid~~  252 (344)
                      .++.+||-+|+|. |..+..+++. |.+|++++.+++.++.+.+.   .|..  ..+...+...+. ...+.+|+|+...
T Consensus        43 ~~~~~vLDiGcG~-G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~d~~~l~~~~~~~fD~V~~~~  120 (255)
T PRK11036         43 PRPLRVLDAGGGE-GQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHCAAQDIAQHLETPVDLILFHA  120 (255)
T ss_pred             CCCCEEEEeCCCc-hHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEcCHHHHhhhcCCCCCEEEehh
Confidence            5567889899863 7777788774 88999999999887766433   2321  112122222222 2346799998532


Q ss_pred             C-----C-chhHHHHHHhcccCCEEEEEc
Q 019199          253 S-----G-DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       253 g-----~-~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .     . ...+..+.+.|+|+|+++.+-
T Consensus       121 vl~~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (255)
T PRK11036        121 VLEWVADPKSVLQTLWSVLRPGGALSLMF  149 (255)
T ss_pred             HHHhhCCHHHHHHHHHHHcCCCeEEEEEE
Confidence            2     2 234788899999999998653

>PRK12809 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.79  E-value=0.04  Score=55.34  Aligned_cols=75  Identities=17%  Similarity=0.212  Sum_probs=55.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHHhCCCcEEEeCCC-HH-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSD-LE-  236 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~-~~-  236 (344)
                      .+++|+|+|+|..|+.++..++..|.+|+++++.+.                     +.+.+ +.+|.+..++..- .+ 
T Consensus       309 ~~kkVaIIG~GpaGl~aA~~L~~~G~~Vtv~e~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~~  387 (639)
T PRK12809        309 RSEKVAVIGAGPAGLGCADILARAGVQVDVFDRHPEIGGMLTFGIPPFKLDKTVLSQRREIF-TAMGIDFHLNCEIGRDI  387 (639)
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHcCCcEEEEeCCCCCCCeeeccCCcccCCHHHHHHHHHHH-HHCCeEEEcCCccCCcC
Confidence            489999999999999999999999999999987753                     33444 6788765554321 11 


Q ss_pred             HHHHhcCCccEEEECCCCc
Q 019199          237 QMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~g~~  255 (344)
                      .+..+..++|.+|.++|..
T Consensus       388 ~~~~l~~~~DaV~latGa~  406 (639)
T PRK12809        388 TFSDLTSEYDAVFIGVGTY  406 (639)
T ss_pred             CHHHHHhcCCEEEEeCCCC
Confidence            2223346799999999864

>PRK08251 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.065  Score=46.61  Aligned_cols=73  Identities=23%  Similarity=0.205  Sum_probs=50.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHH-------hcCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKA-------LGKS  244 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~-------~~~~  244 (344)
                      +.++||+|+ |++|...+..+...|++|+++++++++.+.+...+     +...   ..|..+.+.+.+       ..++
T Consensus         2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   81 (248)
T PRK08251          2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG   81 (248)
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            467999997 99999988888888999999999887765543221     2111   234455443322       1257


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|++|.+.|
T Consensus        82 id~vi~~ag   90 (248)
T PRK08251         82 LDRVIVNAG   90 (248)
T ss_pred             CCEEEECCC
Confidence            999999886

>PRK14179 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.77  E-value=0.091  Score=46.68  Aligned_cols=95  Identities=17%  Similarity=0.213  Sum_probs=70.8

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......|.....--.|.++.|+|. +.+|.-.+.++...|+.|++.....+.                     +
T Consensus       137 ~~PcTp~avi~lL~~~~i~l~Gk~v~vIG~S~ivG~Pla~lL~~~gatVtv~~s~t~~---------------------l  195 (284)
T PRK14179        137 MIPCTPAGIMEMFREYNVELEGKHAVVIGRSNIVGKPMAQLLLDKNATVTLTHSRTRN---------------------L  195 (284)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcCcHHHHHHHHHCCCEEEEECCCCCC---------------------H
Confidence            457766666666665555468999999997 999999999999999999887433221                     1


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+.+|+++-++|.+..+...|  ++++..++++|..
T Consensus       196 ~~~~~~ADIVI~avg~~~~v~~~~--ik~GavVIDvgin  232 (284)
T PRK14179        196 AEVARKADILVVAIGRGHFVTKEF--VKEGAVVIDVGMN  232 (284)
T ss_pred             HHHHhhCCEEEEecCccccCCHHH--ccCCcEEEEecce
Confidence            223356999999999887665544  9999999999865

>PRK06179 short chain dehydrogenase; Provisional

Probab=95.77  E-value=0.05  Score=48.08  Aligned_cols=71  Identities=18%  Similarity=0.197  Sum_probs=50.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      +.+++|+|+ |++|...++.+...|++|++++++.++....   .+.. ...|..+.+.+.+.       .+.+|++|++
T Consensus         4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~   80 (270)
T PRK06179          4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN   80 (270)
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            467899998 9999999998888999999999886654322   1222 23455565544332       2578999999


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        81 ag~   83 (270)
T PRK06179         81 AGV   83 (270)
T ss_pred             CCC
Confidence            884

>PRK06720 hypothetical protein; Provisional

Probab=95.77  E-value=0.082  Score=43.43  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+..++|.|+ +++|...+..+...|++|++++++.++.+...++   .+...   ..|..+.+.+.+.       -+++
T Consensus        15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i   94 (169)
T PRK06720         15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI   94 (169)
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678899987 8999999888888899999999887655433222   24221   2333444333221       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        95 DilVnnAG~  103 (169)
T PRK06720         95 DMLFQNAGL  103 (169)
T ss_pred             CEEEECCCc
Confidence            999988874

>PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed

Probab=95.76  E-value=0.11  Score=45.08  Aligned_cols=75  Identities=28%  Similarity=0.331  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      ++.++||+|+ |.+|..++..+...|++|+...++.++++.+....+...   ..|-.+.+.+.+.       .+++|++
T Consensus         5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   84 (245)
T PRK12936          5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL   84 (245)
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999997 999999999888899999888888777766544444321   2344444433322       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |.+.|.
T Consensus        85 i~~ag~   90 (245)
T PRK12936         85 VNNAGI   90 (245)
T ss_pred             EECCCC
Confidence            998874

>PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.75  E-value=0.049  Score=47.17  Aligned_cols=74  Identities=24%  Similarity=0.277  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d  246 (344)
                      +.+++|.|+ |++|..++..+...|++|+++++++++.+...++   .+...   ..|..+.+.+.+.       .+++|
T Consensus         7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (239)
T PRK07666          7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID   86 (239)
T ss_pred             CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence            578999987 9999999998888999999999987765443222   23221   2233444433222       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|.+.|.
T Consensus        87 ~vi~~ag~   94 (239)
T PRK07666         87 ILINNAGI   94 (239)
T ss_pred             EEEEcCcc
Confidence            99998874

>PRK13656 trans-2-enoyl-CoA reductase; Provisional

Probab=95.75  E-value=0.26  Score=45.75  Aligned_cols=76  Identities=13%  Similarity=0.033  Sum_probs=47.2

Q ss_pred             CCCCEEEEECC-ChHHHH--HHHHHHHCCCeEEEEeCCch--h-------------HHHHHHhCCCcE-E--EeCCCHHH
Q 019199          179 QPGKSLGVIGL-GGLGHM--AVKFGKAFGLNVTVLSTSTS--K-------------KEEALSLLGADK-F--VVSSDLEQ  237 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~--ai~~a~~~g~~V~~~~~~~~--~-------------~~~~~~~~g~~~-~--v~~~~~~~  237 (344)
                      ..+.++||+|+ +++|++  .++.+ ..|+++++++...+  +             ...+.++.|... .  .|-.+.+.
T Consensus        39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~~~G~~a~~i~~DVss~E~  117 (398)
T PRK13656         39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAKAAGLYAKSINGDAFSDEI  117 (398)
T ss_pred             CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHHhcCCceEEEEcCCCCHHH
Confidence            45678899997 899999  45555 78998888874221  1             222334556432 2  24444433


Q ss_pred             HHHh-------cCCccEEEECCCCc
Q 019199          238 MKAL-------GKSLDFIIDTASGD  255 (344)
Q Consensus       238 ~~~~-------~~~~dvvid~~g~~  255 (344)
                      +.+.       -+++|+++++.+.+
T Consensus       118 v~~lie~I~e~~G~IDiLVnSaA~~  142 (398)
T PRK13656        118 KQKVIELIKQDLGQVDLVVYSLASP  142 (398)
T ss_pred             HHHHHHHHHHhcCCCCEEEECCccC
Confidence            3222       26799999988866

>TIGR00417 speE spermidine synthase

Probab=95.75  E-value=0.16  Score=45.18  Aligned_cols=94  Identities=17%  Similarity=0.225  Sum_probs=58.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHhcCCccEEE
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ..++||++|+|. |..+..+++.... ++++++.+++-.+.+++.+..         -.++..+....+.+..+.+|+++
T Consensus        72 ~p~~VL~iG~G~-G~~~~~ll~~~~~~~v~~veid~~vi~~a~~~~~~~~~~~~~~~v~i~~~D~~~~l~~~~~~yDvIi  150 (270)
T TIGR00417        72 NPKHVLVIGGGD-GGVLREVLKHKSVEKATLVDIDEKVIELSKKFLPSLAGSYDDPRVDLQIDDGFKFLADTENTFDVII  150 (270)
T ss_pred             CCCEEEEEcCCc-hHHHHHHHhCCCcceEEEEeCCHHHHHHHHHHhHhhcccccCCceEEEECchHHHHHhCCCCccEEE
Confidence            445999998764 4455666666544 899999888776666443321         11222222334444456899987


Q ss_pred             ECCC----------CchhHHHHHHhcccCCEEEEE
Q 019199          250 DTAS----------GDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       250 d~~g----------~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      -...          ....++.+.+.|+++|.++..
T Consensus       151 ~D~~~~~~~~~~l~~~ef~~~~~~~L~pgG~lv~~  185 (270)
T TIGR00417       151 VDSTDPVGPAETLFTKEFYELLKKALNEDGIFVAQ  185 (270)
T ss_pred             EeCCCCCCcccchhHHHHHHHHHHHhCCCcEEEEc
Confidence            4222          112356888999999999876

the SpeE subunit of spermidine synthase catalysesthe reaction (putrescine + S-adenosylmethioninamine = spermidine + 5'-methylthioadenosine) and is involved in polyamine biosynthesis and in the biosynthesis of spermidine from arganine. The region between residues 77 and 120 of the seed alignment is thought to be involved in binding to decarboxylated SAM.

>PRK04148 hypothetical protein; Provisional

Probab=95.73  E-value=0.073  Score=41.64  Aligned_cols=74  Identities=22%  Similarity=0.257  Sum_probs=50.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCC-CHHHHHHhcCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS-DLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~-~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      .++.+++++|.| .|...+..++..|..|++++.+++..+.+ ++.+.+.+.+.- +++.  ++-+++|+++..-..++
T Consensus        15 ~~~~kileIG~G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a-~~~~~~~v~dDlf~p~~--~~y~~a~liysirpp~e   89 (134)
T PRK04148         15 GKNKKIVELGIG-FYFKVAKKLKESGFDVIVIDINEKAVEKA-KKLGLNAFVDDLFNPNL--EIYKNAKLIYSIRPPRD   89 (134)
T ss_pred             ccCCEEEEEEec-CCHHHHHHHHHCCCEEEEEECCHHHHHHH-HHhCCeEEECcCCCCCH--HHHhcCCEEEEeCCCHH
Confidence            456889999998 78766666667899999999999988888 566654443321 1110  12256777777666665

>PRK06181 short chain dehydrogenase; Provisional

Probab=95.73  E-value=0.054  Score=47.63  Aligned_cols=74  Identities=18%  Similarity=0.205  Sum_probs=50.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d  246 (344)
                      +.++||+|+ |++|..+++.+...|++|+++++++++.+.+.+.   .+...   ..|..+.+.+.+.       .+++|
T Consensus         1 ~~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   80 (263)
T PRK06181          1 GKVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGID   80 (263)
T ss_pred             CCEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence            357899998 9999999999988999999999987665443222   23321   2244444433221       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++.+.|.
T Consensus        81 ~vi~~ag~   88 (263)
T PRK06181         81 ILVNNAGI   88 (263)
T ss_pred             EEEECCCc
Confidence            99998874

>COG0027 PurT Formate-dependent phosphoribosylglycinamide formyltransferase (GAR transformylase) [Nucleotide transport and metabolism]

Probab=95.72  E-value=0.12  Score=45.78  Aligned_cols=157  Identities=13%  Similarity=0.149  Sum_probs=93.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc--CCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG--KSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~--~~~dvvid~~g~~~  256 (344)
                      ....+|+.+|+|-+|.-.+.-++.+|..|+++++-..--..  +.-...++++.-+.+.++.+.  .+.|+++--+-...
T Consensus        10 ~~a~kvmLLGSGELGKEvaIe~QRLG~eViAVDrY~~APAm--qVAhrs~Vi~MlD~~al~avv~rekPd~IVpEiEAI~   87 (394)
T COG0027          10 PQATKVMLLGSGELGKEVAIEAQRLGVEVIAVDRYANAPAM--QVAHRSYVIDMLDGDALRAVVEREKPDYIVPEIEAIA   87 (394)
T ss_pred             CCCeEEEEecCCccchHHHHHHHhcCCEEEEecCcCCChhh--hhhhheeeeeccCHHHHHHHHHhhCCCeeeehhhhhh
Confidence            34456888999999999999999999999999988763322  233346788888888777653  56788864333222


Q ss_pred             hHHHHHHhcccCCEEEEEcCCC---------------ccccCCceee-eechHhHHHHHHHHHh-CCCccc--------e
Q 019199          257 PFDAYMSLLKVAGVYVLVGFPS---------------KVKFSPASLN-IGGTKDTQEMLEYCAA-HKIYPQ--------I  311 (344)
Q Consensus       257 ~~~~~~~~l~~~G~iv~~g~~~---------------~~~~~~~~~~-~~~~~~~~~~~~~~~~-g~~~~~--------~  311 (344)
                       ...+.+.=..+.++|-.....               .+.++...+. ..+.+.+.++.+.+.- ...+|.        .
T Consensus        88 -td~L~elE~~G~~VVP~ArAt~ltMnRegiRrlAAeeLglpTs~Y~fa~s~~e~~~a~~~iGfPcvvKPvMSSSGkGqs  166 (394)
T COG0027          88 -TDALVELEEEGYTVVPNARATKLTMNREGIRRLAAEELGLPTSKYRFADSLEELRAAVEKIGFPCVVKPVMSSSGKGQS  166 (394)
T ss_pred             -HHHHHHHHhCCceEccchHHHHhhhcHHHHHHHHHHHhCCCCccccccccHHHHHHHHHHcCCCeecccccccCCCCce
Confidence             444455555666665443211               2223322222 1222334444333321 112332        1


Q ss_pred             EEEeCccHHHHHHHHHcCCc--ceEEEEE
Q 019199          312 ETIPIENVNEALERLIKRDV--KYRFVID  338 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~--~gkvvi~  338 (344)
                      -+-+-+|+++||+....+..  .+||+++
T Consensus       167 vv~~~e~ve~AW~~A~~g~R~~~~RVIVE  195 (394)
T COG0027         167 VVRSPEDVEKAWEYAQQGGRGGSGRVIVE  195 (394)
T ss_pred             eecCHHHHHHHHHHHHhcCCCCCCcEEEE
Confidence            13378999999998887433  4788765

>KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only]

Probab=95.71  E-value=0.074  Score=47.24  Aligned_cols=77  Identities=21%  Similarity=0.216  Sum_probs=53.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc------EEEeCCCHHHHHH--------
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD------KFVVSSDLEQMKA--------  240 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~------~~v~~~~~~~~~~--------  240 (344)
                      -.|..+||+|+ .++|.+.+..+...|++|+++.+++++.+...+..   +..      ...|..+.+..++        
T Consensus         6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~   85 (270)
T KOG0725|consen    6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK   85 (270)
T ss_pred             CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence            46788899987 89999999999999999999999999866554332   221      2223333332222        


Q ss_pred             hcCCccEEEECCCCc
Q 019199          241 LGKSLDFIIDTASGD  255 (344)
Q Consensus       241 ~~~~~dvvid~~g~~  255 (344)
                      ..+++|+.+++.|..
T Consensus        86 ~~GkidiLvnnag~~  100 (270)
T KOG0725|consen   86 FFGKIDILVNNAGAL  100 (270)
T ss_pred             hCCCCCEEEEcCCcC
Confidence            136799999988743

>PRK14190 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.69  E-value=0.14  Score=45.57  Aligned_cols=95  Identities=19%  Similarity=0.193  Sum_probs=71.7

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+.....--.|.+++|+|. ..+|.-+..++...|+.|++..+....+                     
T Consensus       137 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~atVt~chs~t~~l---------------------  195 (284)
T PRK14190        137 FLPCTPHGILELLKEYNIDISGKHVVVVGRSNIVGKPVGQLLLNENATVTYCHSKTKNL---------------------  195 (284)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEEeCCchhH---------------------
Confidence            467776666666666655468999999997 8999999999999999999876443222                     


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+.+|+++-++|.+..+  --+.++++..++++|..
T Consensus       196 ~~~~~~ADIvI~AvG~p~~i--~~~~ik~gavVIDvGi~  232 (284)
T PRK14190        196 AELTKQADILIVAVGKPKLI--TADMVKEGAVVIDVGVN  232 (284)
T ss_pred             HHHHHhCCEEEEecCCCCcC--CHHHcCCCCEEEEeecc
Confidence            22335589999999988732  25678999999999866

>PRK14180 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.68  E-value=0.12  Score=45.80  Aligned_cols=95  Identities=16%  Similarity=0.134  Sum_probs=72.8

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..+.....--.|.+++|+|. ..+|.-+..++...|++|++..+....+..                   
T Consensus       137 ~~PcTp~aii~lL~~y~i~l~Gk~vvViGrS~~VGkPla~lL~~~~ATVt~chs~T~dl~~-------------------  197 (282)
T PRK14180        137 LESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLKS-------------------  197 (282)
T ss_pred             cCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEEcCCCCCHHH-------------------
Confidence            467776666666766655467999999997 799999999999999999888755432221                   


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        .++.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       198 --~~k~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin  232 (282)
T PRK14180        198 --HTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN  232 (282)
T ss_pred             --HhhhcCEEEEccCCcCcCC--HHHcCCCcEEEEeccc
Confidence              2355999999999887433  4789999999999865

>PRK12746 short chain dehydrogenase; Provisional

Probab=95.68  E-value=0.28  Score=42.72  Aligned_cols=75  Identities=19%  Similarity=0.242  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHhC---CCc---EEEeCCCHHHHHH----hc-----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSLL---GAD---KFVVSSDLEQMKA----LG-----  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~----~~-----  242 (344)
                      .+.+++|+|+ |++|..+++.+...|++|++. .++.++.+.+.+.+   +..   ...|-.+.+.+.+    ..     
T Consensus         5 ~~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~   84 (254)
T PRK12746          5 DGKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQI   84 (254)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhcc
Confidence            3578999998 999999999888889988775 56655544332222   222   1234455443322    11     


Q ss_pred             ----CCccEEEECCCC
Q 019199          243 ----KSLDFIIDTASG  254 (344)
Q Consensus       243 ----~~~dvvid~~g~  254 (344)
                          +++|++|.+.|.
T Consensus        85 ~~~~~~id~vi~~ag~  100 (254)
T PRK12746         85 RVGTSEIDILVNNAGI  100 (254)
T ss_pred             ccCCCCccEEEECCCC
Confidence                368999998874

>PRK05875 short chain dehydrogenase; Provisional

Probab=95.67  E-value=0.078  Score=47.03  Aligned_cols=74  Identities=18%  Similarity=0.186  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-----Cc-EE--EeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----AD-KF--VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-----~~-~~--v~~~~~~~~~~~-------~~  243 (344)
                      ++.++||.|+ |.+|.++++.+...|++|++++++.++.+...+++.     .. .+  .|-.+.+.+.+.       .+
T Consensus         6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   85 (276)
T PRK05875          6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG   85 (276)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            3678999998 999999999999899999999988776544322221     11 12  244444433222       24


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|++|.+.|
T Consensus        86 ~~d~li~~ag   95 (276)
T PRK05875         86 RLHGVVHCAG   95 (276)
T ss_pred             CCCEEEECCC
Confidence            7899999887

>PLN02244 tocopherol O-methyltransferase

Probab=95.67  E-value=0.08  Score=48.76  Aligned_cols=98  Identities=16%  Similarity=0.183  Sum_probs=62.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC--cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA--DKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~--~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      +++++||-+|+|. |..+..+++..|++|++++.+++..+.+.+   +.|.  ...+...+...+....+.||+|+....
T Consensus       117 ~~~~~VLDiGCG~-G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~D~~~~~~~~~~FD~V~s~~~  195 (340)
T PLN02244        117 KRPKRIVDVGCGI-GGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVADALNQPFEDGQFDLVWSMES  195 (340)
T ss_pred             CCCCeEEEecCCC-CHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEcCcccCCCCCCCccEEEECCc
Confidence            6788999999863 667778888889999999999886655532   2232  111111111111111256999986433


Q ss_pred             C------chhHHHHHHhcccCCEEEEEcCC
Q 019199          254 G------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .      ...+.++.+.|+|+|+++...+.
T Consensus       196 ~~h~~d~~~~l~e~~rvLkpGG~lvi~~~~  225 (340)
T PLN02244        196 GEHMPDKRKFVQELARVAAPGGRIIIVTWC  225 (340)
T ss_pred             hhccCCHHHHHHHHHHHcCCCcEEEEEEec
Confidence            1      23477888999999999987543

>PRK14982 acyl-ACP reductase; Provisional

Probab=95.67  E-value=0.053  Score=49.57  Aligned_cols=94  Identities=18%  Similarity=0.282  Sum_probs=64.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      -.+.+|+|+|+ |.+|..+++.+.. .|+ +++++.++.+++..+.++++...+      ..+.+...++|+|+.+++.+
T Consensus       153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i------~~l~~~l~~aDiVv~~ts~~  226 (340)
T PRK14982        153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKI------LSLEEALPEADIVVWVASMP  226 (340)
T ss_pred             cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccH------HhHHHHHccCCEEEECCcCC
Confidence            36789999998 9999998888854 565 899999888888777555542211      12333345799999988875


Q ss_pred             hhHHHHHHhcccCCEEEEEcCCC
Q 019199          256 HPFDAYMSLLKVAGVYVLVGFPS  278 (344)
Q Consensus       256 ~~~~~~~~~l~~~G~iv~~g~~~  278 (344)
                      ..+..-...+++.-.+++++.+.
T Consensus       227 ~~~~I~~~~l~~~~~viDiAvPR  249 (340)
T PRK14982        227 KGVEIDPETLKKPCLMIDGGYPK  249 (340)
T ss_pred             cCCcCCHHHhCCCeEEEEecCCC
Confidence            43212224557777888888773

>TIGR01289 LPOR light-dependent protochlorophyllide reductase

Probab=95.64  E-value=0.094  Score=47.69  Aligned_cols=74  Identities=26%  Similarity=0.333  Sum_probs=52.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCC---c-E--EEeCCCHHHHHHh-------cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA---D-K--FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~---~-~--~v~~~~~~~~~~~-------~~~~  245 (344)
                      +.++||+|+ +++|.+.+..+...| ++|++++++.++.+.+.++++.   . .  ..|-.+.+.+.+.       .+++
T Consensus         3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i   82 (314)
T TIGR01289         3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL   82 (314)
T ss_pred             CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            568999998 899999888888889 8999999988877665455431   1 1  2355554433221       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        83 D~lI~nAG~   91 (314)
T TIGR01289        83 DALVCNAAV   91 (314)
T ss_pred             CEEEECCCc
Confidence            999998773

This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form.

>PLN02780 ketoreductase/ oxidoreductase

Probab=95.64  E-value=0.065  Score=48.92  Aligned_cols=44  Identities=20%  Similarity=0.194  Sum_probs=37.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS  222 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~  222 (344)
                      +.|.+++|+|+ +++|.+.+..+...|++|+++++++++++.+.+
T Consensus        51 ~~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~   95 (320)
T PLN02780         51 KYGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSD   95 (320)
T ss_pred             ccCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHH
Confidence            35889999998 999999888888889999999999988765533

>PRK15409 bifunctional glyoxylate/hydroxypyruvate reductase B; Provisional

Probab=95.63  E-value=0.17  Score=46.26  Aligned_cols=107  Identities=18%  Similarity=0.282  Sum_probs=71.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~-~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~  257 (344)
                      .|.++.|+|.|.+|...++.++ .+|.+|++.++..... .. ..++...    .+   +.++-...|+|.-+..- +.+
T Consensus       144 ~gktvGIiG~G~IG~~va~~l~~~fgm~V~~~~~~~~~~-~~-~~~~~~~----~~---l~ell~~sDvv~lh~plt~~T  214 (323)
T PRK15409        144 HHKTLGIVGMGRIGMALAQRAHFGFNMPILYNARRHHKE-AE-ERFNARY----CD---LDTLLQESDFVCIILPLTDET  214 (323)
T ss_pred             CCCEEEEEcccHHHHHHHHHHHhcCCCEEEEECCCCchh-hH-HhcCcEe----cC---HHHHHHhCCEEEEeCCCChHH
Confidence            6789999999999999999998 8999999887654322 11 2445321    12   23334568998876653 221


Q ss_pred             ----HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          258 ----FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                          -...++.|+++..+|.++-..-+             +-+.+++.+.+|++.
T Consensus       215 ~~li~~~~l~~mk~ga~lIN~aRG~vV-------------de~AL~~AL~~g~i~  256 (323)
T PRK15409        215 HHLFGAEQFAKMKSSAIFINAGRGPVV-------------DENALIAALQKGEIH  256 (323)
T ss_pred             hhccCHHHHhcCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCee
Confidence                23577889999999888633111             235666777777764

>PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.62  E-value=0.12  Score=45.34  Aligned_cols=74  Identities=22%  Similarity=0.158  Sum_probs=49.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      .+.+++|+|+ |++|.+.++.+...|++|+++.++.++ .+.+ +..+.. ...|-.+++.+.+.       .+++|++|
T Consensus         6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l-~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li   84 (255)
T PRK06463          6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKEL-REKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV   84 (255)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHH-HhCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999997 999999999988899999887665443 3333 233332 22355555443332       25799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      .+.|.
T Consensus        85 ~~ag~   89 (255)
T PRK06463         85 NNAGI   89 (255)
T ss_pred             ECCCc
Confidence            98874

>PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.60  E-value=0.016  Score=55.57  Aligned_cols=92  Identities=16%  Similarity=0.150  Sum_probs=60.4

Q ss_pred             ccCCCCCCEEE----EECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEE
Q 019199          175 HKMNQPGKSLG----VIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       175 ~~~~~~g~~vl----I~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..++++|+.+|    |+|+ |++|.+++++++..|++|+.+.+.+.+.... +..+.+ .++|.+..+....+..     
T Consensus        28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~-~~~~~~~~~~d~~~~~~~~~l~~-----  101 (450)
T PRK08261         28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAG-WGDRFGALVFDATGITDPADLKA-----  101 (450)
T ss_pred             ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccC-cCCcccEEEEECCCCCCHHHHHH-----
Confidence            45568888888    7765 9999999999999999999887665533322 233333 3455443222111100     


Q ss_pred             EECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                           -...+..+++.+.++|+++.++..
T Consensus       102 -----~~~~~~~~l~~l~~~griv~i~s~  125 (450)
T PRK08261        102 -----LYEFFHPVLRSLAPCGRVVVLGRP  125 (450)
T ss_pred             -----HHHHHHHHHHhccCCCEEEEEccc
Confidence                 012366778888999999999865

>PRK12480 D-lactate dehydrogenase; Provisional

Probab=95.58  E-value=0.19  Score=45.99  Aligned_cols=105  Identities=16%  Similarity=0.225  Sum_probs=71.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      .|.+|.|+|.|.+|...++.++.+|.+|++.+++.+.....     ..    ..  ..+.+...+.|+++.++....   
T Consensus       145 ~g~~VgIIG~G~IG~~vA~~L~~~G~~V~~~d~~~~~~~~~-----~~----~~--~~l~ell~~aDiVil~lP~t~~t~  213 (330)
T PRK12480        145 KNMTVAIIGTGRIGAATAKIYAGFGATITAYDAYPNKDLDF-----LT----YK--DSVKEAIKDADIISLHVPANKESY  213 (330)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCChhHhhhh-----hh----cc--CCHHHHHhcCCEEEEeCCCcHHHH
Confidence            67789999999999999999999999999999876532211     00    10  112334466899998887542   


Q ss_pred             --hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          257 --PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       257 --~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                        .....+..++++..+|.++-..-.             +-+.+++.+.+|++.
T Consensus       214 ~li~~~~l~~mk~gavlIN~aRG~~v-------------d~~aL~~aL~~g~i~  254 (330)
T PRK12480        214 HLFDKAMFDHVKKGAILVNAARGAVI-------------NTPDLIAAVNDGTLL  254 (330)
T ss_pred             HHHhHHHHhcCCCCcEEEEcCCcccc-------------CHHHHHHHHHcCCee
Confidence              123556778888888888643111             245677778888775

>PRK07454 short chain dehydrogenase; Provisional

Probab=95.58  E-value=0.091  Score=45.52  Aligned_cols=75  Identities=16%  Similarity=0.114  Sum_probs=51.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |.+|..++..+...|++|+++++++++.+.+.+.   .+..   ...|-.+.+.+.+.       .+++
T Consensus         5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (241)
T PRK07454          5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP   84 (241)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4568999987 9999999999988999999999988765544322   2222   12344444433221       2569


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        85 d~lv~~ag~   93 (241)
T PRK07454         85 DVLINNAGM   93 (241)
T ss_pred             CEEEECCCc
Confidence            999998874

>PRK14169 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.57  E-value=0.14  Score=45.45  Aligned_cols=95  Identities=16%  Similarity=0.192  Sum_probs=72.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......|.....--.|.+++|+|. ..+|.-+.+++...|+.|++..+....+.                    
T Consensus       135 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~atVtichs~T~~l~--------------------  194 (282)
T PRK14169        135 VVASTPYGIMALLDAYDIDVAGKRVVIVGRSNIVGRPLAGLMVNHDATVTIAHSKTRNLK--------------------  194 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEECCCCCCHH--------------------
Confidence            467776666666666655468999999997 79999999999999999998865543322                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       195 -~~~~~ADIvI~AvG~p~~i~--~~~vk~GavVIDvGin  230 (282)
T PRK14169        195 -QLTKEADILVVAVGVPHFIG--ADAVKPGAVVIDVGIS  230 (282)
T ss_pred             -HHHhhCCEEEEccCCcCccC--HHHcCCCcEEEEeecc
Confidence             22355899999999887332  5689999999999865

>TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase

Probab=95.57  E-value=0.096  Score=47.87  Aligned_cols=75  Identities=17%  Similarity=0.150  Sum_probs=51.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhCCC-c-E--EEeCCCHHHHHHhcCCccEEEECC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLGA-D-K--FVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~g~-~-~--~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .|.++||+|+ |.+|..++..+...|  .+|++++++..+...+.+.+.. . .  ..|..+.+.+.+.-.++|++|.+.
T Consensus         3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~~~l~~~~~~iD~Vih~A   82 (324)
T TIGR03589         3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDKERLTRALRGVDYVVHAA   82 (324)
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHhcCCEEEECc
Confidence            3678999987 999999888877665  5898888776654433233321 1 1  225566666665556799999987


Q ss_pred             CC
Q 019199          253 SG  254 (344)
Q Consensus       253 g~  254 (344)
                      +.
T Consensus        83 g~   84 (324)
T TIGR03589        83 AL   84 (324)
T ss_pred             cc
Confidence            73

This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family.

>PRK13581 D-3-phosphoglycerate dehydrogenase; Provisional

Probab=95.57  E-value=0.21  Score=48.85  Aligned_cols=88  Identities=28%  Similarity=0.358  Sum_probs=63.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      .|.++.|+|.|.+|...++.++.+|.+|++.++.... +.. ..+|....    +   +.++....|+++.++....   
T Consensus       139 ~gktvgIiG~G~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-~~~g~~~~----~---l~ell~~aDiV~l~lP~t~~t~  209 (526)
T PRK13581        139 YGKTLGIIGLGRIGSEVAKRAKAFGMKVIAYDPYISP-ERA-AQLGVELV----S---LDELLARADFITLHTPLTPETR  209 (526)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEECCCCCh-hHH-HhcCCEEE----c---HHHHHhhCCEEEEccCCChHhh
Confidence            5889999999999999999999999999999975432 222 35565432    1   2333456899988777432   


Q ss_pred             -hH-HHHHHhcccCCEEEEEcC
Q 019199          257 -PF-DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 -~~-~~~~~~l~~~G~iv~~g~  276 (344)
                       .+ ...+..++++..+|.++-
T Consensus       210 ~li~~~~l~~mk~ga~lIN~aR  231 (526)
T PRK13581        210 GLIGAEELAKMKPGVRIINCAR  231 (526)
T ss_pred             cCcCHHHHhcCCCCeEEEECCC
Confidence             12 467788999998888863

>PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA

Probab=95.57  E-value=0.14  Score=44.19  Aligned_cols=70  Identities=24%  Similarity=0.283  Sum_probs=53.3

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhCCCcEE-EeCCCHHHHHHhcCCccEEEECCCC
Q 019199          184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGADKF-VVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      |+|+|+ |.+|...++.+...+.+|.++.++...  ...+ +..|++.+ .|..+.+.+.+.-+|+|.||.+.+.
T Consensus         1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l-~~~g~~vv~~d~~~~~~l~~al~g~d~v~~~~~~   74 (233)
T PF05368_consen    1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQL-QALGAEVVEADYDDPESLVAALKGVDAVFSVTPP   74 (233)
T ss_dssp             EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHH-HHTTTEEEES-TT-HHHHHHHHTTCSEEEEESSC
T ss_pred             CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhh-hcccceEeecccCCHHHHHHHHcCCceEEeecCc
Confidence            689998 999999999999888899999998753  3444 56787543 2455667777666899999998883

NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B ....

>PRK11207 tellurite resistance protein TehB; Provisional

Probab=95.57  E-value=0.055  Score=45.66  Aligned_cols=94  Identities=17%  Similarity=0.202  Sum_probs=58.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE-EEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK-FVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      .++.+||-+|+|. |..+..+++. |.+|++++.+++-.+.+++   ..+... .+...+.... ...+.+|+|+.....
T Consensus        29 ~~~~~vLDiGcG~-G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~  105 (197)
T PRK11207         29 VKPGKTLDLGCGN-GRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDNLHTAVVDLNNL-TFDGEYDFILSTVVL  105 (197)
T ss_pred             CCCCcEEEECCCC-CHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCcceEEecChhhC-CcCCCcCEEEEecch
Confidence            5678899999864 7777788774 8899999999876555432   222211 1111111111 123569999875431


Q ss_pred             --------chhHHHHHHhcccCCEEEEEc
Q 019199          255 --------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       255 --------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                              ...+..+.+.|+|+|+++.+.
T Consensus       106 ~~~~~~~~~~~l~~i~~~LkpgG~~~~~~  134 (197)
T PRK11207        106 MFLEAKTIPGLIANMQRCTKPGGYNLIVA  134 (197)
T ss_pred             hhCCHHHHHHHHHHHHHHcCCCcEEEEEE
Confidence                    133667778899999965543

>PRK08644 thiamine biosynthesis protein ThiF; Provisional

Probab=95.57  E-value=0.089  Score=44.95  Aligned_cols=34  Identities=24%  Similarity=0.385  Sum_probs=29.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      ...+|+|+|+|++|..+++.+...|. +++++|..
T Consensus        27 ~~~~V~ViG~GglGs~ia~~La~~Gvg~i~lvD~D   61 (212)
T PRK08644         27 KKAKVGIAGAGGLGSNIAVALARSGVGNLKLVDFD   61 (212)
T ss_pred             hCCCEEEECcCHHHHHHHHHHHHcCCCeEEEEeCC
Confidence            44679999999999999999999999 78888876

>PRK06124 gluconate 5-dehydrogenase; Provisional

Probab=95.56  E-value=0.092  Score=45.96  Aligned_cols=76  Identities=22%  Similarity=0.257  Sum_probs=52.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHH----h---cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKA----L---GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~----~---~~~  244 (344)
                      -.+.+++|+|+ |++|...+..+...|++|+++++++++.+.+.+   +.+..   ...|..+.+.+.+    .   .++
T Consensus         9 ~~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   88 (256)
T PRK06124          9 LAGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGR   88 (256)
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            35789999998 999999998888889999999998776544422   23421   1224445443322    1   256


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++.+.|.
T Consensus        89 id~vi~~ag~   98 (256)
T PRK06124         89 LDILVNNVGA   98 (256)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK06198 short chain dehydrogenase; Provisional

Probab=95.55  E-value=0.1  Score=45.71  Aligned_cols=75  Identities=25%  Similarity=0.243  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHH---HhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEAL---SLLGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~---~~~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.+++|+|+ |++|..+++.+...|++ |++++++.++.....   +..+..   ..+|..+.+.+.+.       -++
T Consensus         5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   84 (260)
T PRK06198          5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR   84 (260)
T ss_pred             CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999998 99999999999999997 999998866554222   233432   22355555443332       157


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        85 id~li~~ag~   94 (260)
T PRK06198         85 LDALVNAAGL   94 (260)
T ss_pred             CCEEEECCCc
Confidence            9999999874

>PRK08277 D-mannonate oxidoreductase; Provisional

Probab=95.54  E-value=0.1  Score=46.32  Aligned_cols=74  Identities=24%  Similarity=0.243  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.+++|+|+ |++|.+.+..+...|++|++++++.++.+.+.++   .+...   ..|..+.+.+...       .+++
T Consensus         9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i   88 (278)
T PRK08277          9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC   88 (278)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 9999999999988999999999887765444333   23221   2234444333221       2579


Q ss_pred             cEEEECCC
Q 019199          246 DFIIDTAS  253 (344)
Q Consensus       246 dvvid~~g  253 (344)
                      |++|.+.|
T Consensus        89 d~li~~ag   96 (278)
T PRK08277         89 DILINGAG   96 (278)
T ss_pred             CEEEECCC
Confidence            99999887

>PRK07904 short chain dehydrogenase; Provisional

Probab=95.54  E-value=0.071  Score=46.81  Aligned_cols=76  Identities=14%  Similarity=0.110  Sum_probs=49.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchh-HHHHHHh---CCC-c-E--EEeCCCHHHH----HHh--c
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSK-KEEALSL---LGA-D-K--FVVSSDLEQM----KAL--G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~-~~~~~~~---~g~-~-~--~v~~~~~~~~----~~~--~  242 (344)
                      ..+.++||+|+ |++|.+.++.+... |++|+++++++++ ++.+.++   .+. + +  ..|..+.+.+    ++.  .
T Consensus         6 ~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~~~   85 (253)
T PRK07904          6 GNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAFAG   85 (253)
T ss_pred             CCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHHhc
Confidence            56778999998 99999988876666 4899999998775 4433222   232 1 1  2344444322    222  1


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++.+.|.
T Consensus        86 g~id~li~~ag~   97 (253)
T PRK07904         86 GDVDVAIVAFGL   97 (253)
T ss_pred             CCCCEEEEeeec
Confidence            579999887764

>cd01079 NAD_bind_m-THF_DH NAD binding domain of methylene-tetrahydrofolate dehydrogenase

Probab=95.52  E-value=0.11  Score=43.30  Aligned_cols=114  Identities=12%  Similarity=0.054  Sum_probs=75.3

Q ss_pred             ccchhhhHhHHHHHhccC---------CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-E
Q 019199          160 PLLCAGITVYTPMMRHKM---------NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-K  228 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~---------~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~  228 (344)
                      .+||+.......|.....         --.|.+++|+|- ..+|.=+..++...||+|++++.+.-..  . ..-+.. +
T Consensus        32 ~~PCTp~avi~lL~~~~i~~~~~~~~~~l~GK~vvVIGrS~iVGkPla~lL~~~~AtVti~~~~~~~~--~-~~~~~~~h  108 (197)
T cd01079          32 ILPCTPLAIVKILEFLGIYNKILPYGNRLYGKTITIINRSEVVGRPLAALLANDGARVYSVDINGIQV--F-TRGESIRH  108 (197)
T ss_pred             ccCCCHHHHHHHHHHhCCcccccccCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEEecCcccc--c-cccccccc
Confidence            456666666665654432         267999999997 7999999999999999999886443211  1 011100 0


Q ss_pred             EEeC-CC-HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          229 FVVS-SD-LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       229 ~v~~-~~-~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      --.. .+ +..+.+..+.+|+++-++|.+. +.---+.++++..+|++|..
T Consensus       109 s~t~~~~~~~~l~~~~~~ADIVIsAvG~~~-~~i~~d~ik~GavVIDVGi~  158 (197)
T cd01079         109 EKHHVTDEEAMTLDCLSQSDVVITGVPSPN-YKVPTELLKDGAICINFASI  158 (197)
T ss_pred             ccccccchhhHHHHHhhhCCEEEEccCCCC-CccCHHHcCCCcEEEEcCCC
Confidence            0000 11 1224455688999999999987 43336789999999999866

The NAD-binding domain of methylene-tetrahydrofolate dehydrogenase (m-THF DH). M-THF is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. M-THF DH is a component of an unusual monofunctional enzyme; in eukaryotes, m-THF DH is typically found as part of a multifunctional protein. NADP-dependent m-THF DHs in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofunctional DH, as well as bifunctional DH/cyclodrolase are found. In addition, yeast (S. cerevisiae) also express an monofunctional DH. This family contains only the monofunctional

>PLN02490 MPBQ/MSBQ methyltransferase

Probab=95.49  E-value=0.13  Score=47.11  Aligned_cols=97  Identities=20%  Similarity=0.209  Sum_probs=62.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCC---
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTAS---  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g---  253 (344)
                      .++.+||-+|+|. |..+..+++..+ .+|++++.+++.++.+.+...... -+...+...+....+.+|+|+.+..   
T Consensus       112 ~~~~~VLDLGcGt-G~~~l~La~~~~~~~VtgVD~S~~mL~~A~~k~~~~~i~~i~gD~e~lp~~~~sFDvVIs~~~L~~  190 (340)
T PLN02490        112 DRNLKVVDVGGGT-GFTTLGIVKHVDAKNVTILDQSPHQLAKAKQKEPLKECKIIEGDAEDLPFPTDYADRYVSAGSIEY  190 (340)
T ss_pred             CCCCEEEEEecCC-cHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhhhccCCeEEeccHHhCCCCCCceeEEEEcChhhh
Confidence            5778999999865 667777787764 589999999887777754432111 1111111111111246898876432   


Q ss_pred             ---CchhHHHHHHhcccCCEEEEEcC
Q 019199          254 ---GDHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       254 ---~~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                         ....++++.+.|+++|+++.++.
T Consensus       191 ~~d~~~~L~e~~rvLkPGG~LvIi~~  216 (340)
T PLN02490        191 WPDPQRGIKEAYRVLKIGGKACLIGP  216 (340)
T ss_pred             CCCHHHHHHHHHHhcCCCcEEEEEEe
Confidence               12347889999999999988754

>PRK07097 gluconate 5-dehydrogenase; Provisional

Probab=95.49  E-value=0.14  Score=45.15  Aligned_cols=75  Identities=19%  Similarity=0.256  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ +++|.+.+..+...|++|+++++++++.+.+.+.   .|...   ..|-.+.+.+.+.       .+++
T Consensus         9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i   88 (265)
T PRK07097          9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEVGVI   88 (265)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence            5678999998 9999998888888999999999888766544322   34322   2344554433322       2568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        89 d~li~~ag~   97 (265)
T PRK07097         89 DILVNNAGI   97 (265)
T ss_pred             CEEEECCCC
Confidence            999998874

>PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.49  E-value=0.54  Score=40.55  Aligned_cols=75  Identities=27%  Similarity=0.286  Sum_probs=48.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHH---hCCCcE-EE--eCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALS---LLGADK-FV--VSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~---~~g~~~-~v--~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |.+|...+..+...|++|+++.++.++ .+...+   ..+... .+  |..+.+.+.+.       ..+
T Consensus         4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   83 (248)
T PRK05557          4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            3568999998 999999999998899999777766542 222211   223222 22  44554433221       247


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++.+.|.
T Consensus        84 id~vi~~ag~   93 (248)
T PRK05557         84 VDILVNNAGI   93 (248)
T ss_pred             CCEEEECCCc
Confidence            8999998874

>COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism]

Probab=95.48  E-value=0.37  Score=41.41  Aligned_cols=98  Identities=18%  Similarity=0.255  Sum_probs=59.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc------hhH-HHHHHhCCC---------------cEEEeCC---
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST------SKK-EEALSLLGA---------------DKFVVSS---  233 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~------~~~-~~~~~~~g~---------------~~~v~~~---  233 (344)
                      ..++|+|+|.|++|.+++..+-..|. +++.++...      +|. ..+....|-               ..-++..   
T Consensus        29 ~~~~V~VvGiGGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~f  108 (263)
T COG1179          29 KQAHVCVVGIGGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAINDF  108 (263)
T ss_pred             hhCcEEEEecCchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHhh
Confidence            34789999999999999999999998 888877442      221 111112221               0001111   


Q ss_pred             -CHHHHHHh-cCCccEEEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199          234 -DLEQMKAL-GKSLDFIIDTASGDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       234 -~~~~~~~~-~~~~dvvid~~g~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                       .++.+.++ ..++|+|+|+..+-.. ...+..|.+.+=.+|..+..
T Consensus       109 ~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Ga  155 (263)
T COG1179         109 ITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGA  155 (263)
T ss_pred             hCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccc
Confidence             12333443 3689999999987553 33344466666667766544

>PRK14173 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.48  E-value=0.16  Score=45.26  Aligned_cols=95  Identities=18%  Similarity=0.177  Sum_probs=71.8

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......|...+.--.|.+++|+|. ..+|.=+..++...|+.|++..+....+.                    
T Consensus       134 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVtichs~T~~l~--------------------  193 (287)
T PRK14173        134 LEPCTPAGVVRLLKHYGIPLAGKEVVVVGRSNIVGKPLAALLLREDATVTLAHSKTQDLP--------------------  193 (287)
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCCccHHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            467766666666665554457999999997 89999999999999999998775543322                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+  --+.++++..++++|..
T Consensus       194 -~~~~~ADIvIsAvGkp~~i--~~~~vk~GavVIDVGin  229 (287)
T PRK14173        194 -AVTRRADVLVVAVGRPHLI--TPEMVRPGAVVVDVGIN  229 (287)
T ss_pred             -HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence             2235589999999988733  35778999999999866

>PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.47  E-value=0.36  Score=41.96  Aligned_cols=74  Identities=23%  Similarity=0.196  Sum_probs=47.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cC-Ccc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADK---FVVSSDLEQMKAL-------GK-SLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~-~~d  246 (344)
                      .+.++||+|+ |++|...+..+...|++|++..+ .+++.+.+..+++...   ..|..+.+.+.+.       .+ ++|
T Consensus         4 ~~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id   83 (253)
T PRK08642          4 SEQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPIT   83 (253)
T ss_pred             CCCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCe
Confidence            3568999997 99999999988889999987655 3444444434444221   1244444433221       13 399


Q ss_pred             EEEECCC
Q 019199          247 FIIDTAS  253 (344)
Q Consensus       247 vvid~~g  253 (344)
                      +++.+.|
T Consensus        84 ~li~~ag   90 (253)
T PRK08642         84 TVVNNAL   90 (253)
T ss_pred             EEEECCC
Confidence            9998875

>PRK08410 2-hydroxyacid dehydrogenase; Provisional

Probab=95.46  E-value=0.21  Score=45.38  Aligned_cols=111  Identities=27%  Similarity=0.363  Sum_probs=74.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-ch--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DH--  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~--  256 (344)
                      .|.+|.|+|.|.+|...+++++.+|.+|++.++.....     ..+..    ..   .+.++-...|+|.-+... +.  
T Consensus       144 ~gktvGIiG~G~IG~~vA~~~~~fgm~V~~~d~~~~~~-----~~~~~----~~---~l~ell~~sDvv~lh~Plt~~T~  211 (311)
T PRK08410        144 KGKKWGIIGLGTIGKRVAKIAQAFGAKVVYYSTSGKNK-----NEEYE----RV---SLEELLKTSDIISIHAPLNEKTK  211 (311)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhhcCCEEEEECCCcccc-----ccCce----ee---cHHHHhhcCCEEEEeCCCCchhh
Confidence            68999999999999999999999999999998753211     11211    11   233444558888776652 22  


Q ss_pred             --hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeC
Q 019199          257 --PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPI  316 (344)
Q Consensus       257 --~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~  316 (344)
                        .-...++.|+++..+|.++-..-+             +-+.+++.+.+|++. - ..+|.-
T Consensus       212 ~li~~~~~~~Mk~~a~lIN~aRG~vV-------------De~AL~~AL~~g~i~-AaLDV~~~  260 (311)
T PRK08410        212 NLIAYKELKLLKDGAILINVGRGGIV-------------NEKDLAKALDEKDIY-AGLDVLEK  260 (311)
T ss_pred             cccCHHHHHhCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCeE-EEEecCCC
Confidence              134677889999999888633211             245677888888876 4 255533

>PRK01683 trans-aconitate 2-methyltransferase; Provisional

Probab=95.46  E-value=0.19  Score=44.22  Aligned_cols=95  Identities=23%  Similarity=0.238  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC--
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG--  254 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~--  254 (344)
                      +.++++||-+|+|. |..+..+++.. +.+|++++.+++..+.+.+.+.....+..+ ...+. ....+|+|+....-  
T Consensus        29 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~~v~gvD~s~~~i~~a~~~~~~~~~~~~d-~~~~~-~~~~fD~v~~~~~l~~  105 (258)
T PRK01683         29 LENPRYVVDLGCGP-GNSTELLVERWPAARITGIDSSPAMLAEARSRLPDCQFVEAD-IASWQ-PPQALDLIFANASLQW  105 (258)
T ss_pred             CcCCCEEEEEcccC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHhCCCCeEEECc-hhccC-CCCCccEEEEccChhh
Confidence            37889999999863 66677888776 569999999998888775554322222222 11111 12478998764431  


Q ss_pred             ----chhHHHHHHhcccCCEEEEEc
Q 019199          255 ----DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       255 ----~~~~~~~~~~l~~~G~iv~~g  275 (344)
                          ...+..+.+.|+++|+++...
T Consensus       106 ~~d~~~~l~~~~~~LkpgG~~~~~~  130 (258)
T PRK01683        106 LPDHLELFPRLVSLLAPGGVLAVQM  130 (258)
T ss_pred             CCCHHHHHHHHHHhcCCCcEEEEEC
Confidence                234788889999999998753

>PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional

Probab=95.45  E-value=0.095  Score=45.99  Aligned_cols=75  Identities=19%  Similarity=0.188  Sum_probs=50.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      ..+.++||+|+ |++|.+.++.+...|++|++++++ ++.+.+   ..+.+..   ...|..+.+.+.+.       .++
T Consensus        13 l~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   91 (258)
T PRK06935         13 LDGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGK   91 (258)
T ss_pred             CCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998 999999999998899999999887 332222   2233432   12344454433322       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++.+.|.
T Consensus        92 id~li~~ag~  101 (258)
T PRK06935         92 IDILVNNAGT  101 (258)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>PRK06914 short chain dehydrogenase; Provisional

Probab=95.45  E-value=0.085  Score=46.90  Aligned_cols=74  Identities=20%  Similarity=0.211  Sum_probs=50.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--c---EEEeCCCHHHHHH---h---cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--D---KFVVSSDLEQMKA---L---GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~---~~v~~~~~~~~~~---~---~~~~  245 (344)
                      +.++||+|+ |.+|...+..+...|++|++++++.++.+...+.   .+.  .   ...|..+.+.+.+   .   .+++
T Consensus         3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~i   82 (280)
T PRK06914          3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHNFQLVLKEIGRI   82 (280)
T ss_pred             CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHHHHHHHHhcCCe
Confidence            567899998 9999999998888999999999887765444222   221  1   1235555543322   1   2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        83 d~vv~~ag~   91 (280)
T PRK06914         83 DLLVNNAGY   91 (280)
T ss_pred             eEEEECCcc
Confidence            999998874

>PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated

Probab=95.45  E-value=0.34  Score=42.10  Aligned_cols=69  Identities=19%  Similarity=0.164  Sum_probs=47.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |.+|...+..+...|++|++++++.     . +..+..   ...|..+.+.+.+.       .+++|++
T Consensus         7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v   80 (252)
T PRK08220          7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----L-TQEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL   80 (252)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----h-hhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 8999999998888999999998875     1 222321   12344444433332       2568999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |.+.|.
T Consensus        81 i~~ag~   86 (252)
T PRK08220         81 VNAAGI   86 (252)
T ss_pred             EECCCc
Confidence            998874

>PRK14186 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.45  E-value=0.17  Score=45.26  Aligned_cols=95  Identities=19%  Similarity=0.212  Sum_probs=70.8

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      ..||+.......+...+.--.|.+++|+|. ..+|.-+..++...|++|++..+....+..                   
T Consensus       137 ~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGkPla~lL~~~~atVtv~hs~T~~l~~-------------------  197 (297)
T PRK14186        137 LRSCTPAGVMRLLRSQQIDIAGKKAVVVGRSILVGKPLALMLLAANATVTIAHSRTQDLAS-------------------  197 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHHH-------------------
Confidence            456666666666665554467999999997 899999999999999999988655433322                   


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        ..+.+|+++-++|.+..+.  -+.++++..++++|..
T Consensus       198 --~~~~ADIvIsAvGkp~~i~--~~~ik~gavVIDvGin  232 (297)
T PRK14186        198 --ITREADILVAAAGRPNLIG--AEMVKPGAVVVDVGIH  232 (297)
T ss_pred             --HHhhCCEEEEccCCcCccC--HHHcCCCCEEEEeccc
Confidence              2345899999999876332  5688999999999866

>TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase

Probab=95.43  E-value=0.098  Score=45.51  Aligned_cols=75  Identities=24%  Similarity=0.240  Sum_probs=50.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCc---EEEeCCCHHHHHH----h---cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGAD---KFVVSSDLEQMKA----L---GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~---~~v~~~~~~~~~~----~---~~~~dv  247 (344)
                      .|.++||+|+ |++|.+.+..+...|++|++++++.. +.....++.+..   ...|..+.+.+..    .   .+++|+
T Consensus         4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   83 (248)
T TIGR01832         4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVEALGRRFLSLTADLSDIEAIKALVDSAVEEFGHIDI   83 (248)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCCE
Confidence            4788999998 99999999999889999999988653 222222344432   1234444443322    1   257999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        84 li~~ag~   90 (248)
T TIGR01832        84 LVNNAGI   90 (248)
T ss_pred             EEECCCC
Confidence            9998874

This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation.

>PF02558 ApbA: Ketopantoate reductase PanE/ApbA; InterPro: IPR013332 ApbA, the ketopantoate reductase enzyme 1

Probab=95.43  E-value=0.024  Score=45.47  Aligned_cols=89  Identities=18%  Similarity=0.171  Sum_probs=57.2

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC-------CC-HHHHHHhcCCccEEEECCCCc
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS-------SD-LEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~-------~~-~~~~~~~~~~~dvvid~~g~~  255 (344)
                      ++|+|+|.+|...+..++..|.+|..+.+.+ +.+.. ++.|.......       .. ........+.+|++|-|+-..
T Consensus         1 I~I~G~GaiG~~~a~~L~~~g~~V~l~~r~~-~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~viv~vKa~   78 (151)
T PF02558_consen    1 ILIIGAGAIGSLYAARLAQAGHDVTLVSRSP-RLEAI-KEQGLTITGPDGDETVQPPIVISAPSADAGPYDLVIVAVKAY   78 (151)
T ss_dssp             EEEESTSHHHHHHHHHHHHTTCEEEEEESHH-HHHHH-HHHCEEEEETTEEEEEEEEEEESSHGHHHSTESEEEE-SSGG
T ss_pred             CEEECcCHHHHHHHHHHHHCCCceEEEEccc-cHHhh-hheeEEEEecccceecccccccCcchhccCCCcEEEEEeccc
Confidence            5789999999998888887999999999988 66665 45553211111       00 000012236799999999876


Q ss_pred             hhHHHHHHhc----ccCCEEEEEc
Q 019199          256 HPFDAYMSLL----KVAGVYVLVG  275 (344)
Q Consensus       256 ~~~~~~~~~l----~~~G~iv~~g  275 (344)
                      . ...+++.+    .+...++.+-
T Consensus        79 ~-~~~~l~~l~~~~~~~t~iv~~q  101 (151)
T PF02558_consen   79 Q-LEQALQSLKPYLDPNTTIVSLQ  101 (151)
T ss_dssp             G-HHHHHHHHCTGEETTEEEEEES
T ss_pred             c-hHHHHHHHhhccCCCcEEEEEe
Confidence            5 55555555    4455666663

1.1.169 from EC of Salmonella typhimurium is required for the synthesis of thiamine via the alternative pyrimidine biosynthetic pathway []. Precursors to the pyrimidine moiety of thiamine are synthesized de novo by the purine biosynthetic pathway or the alternative pyrimidine biosynthetic (APB) pathway. The ApbA protein catalyzes the NADPH-specific reduction of ketopantoic acid to pantoic acid. This activity had previously been associated with the pantothenate biosynthetic gene panE []. ApbA and PanE are allelic [].; GO: 0008677 2-dehydropantoate 2-reductase activity, 0055114 oxidation-reduction process; PDB: 3EGO_B 3HWR_B 2QYT_A 1YJQ_A 1KS9_A 2OFP_A 1YON_A 3G17_E 3GHY_B 3I83_B ....

>PRK11088 rrmA 23S rRNA methyltransferase A; Provisional

Probab=95.43  E-value=0.16  Score=45.23  Aligned_cols=95  Identities=21%  Similarity=0.215  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      ..+.+||-+|+|. |..+..+++..    ++.++.++.+++-.+.+.+..+....+..+. ..+.-....+|+|+.... 
T Consensus        84 ~~~~~vLDiGcG~-G~~~~~l~~~~~~~~~~~v~giD~s~~~l~~A~~~~~~~~~~~~d~-~~lp~~~~sfD~I~~~~~-  160 (272)
T PRK11088         84 EKATALLDIGCGE-GYYTHALADALPEITTMQLFGLDISKVAIKYAAKRYPQVTFCVASS-HRLPFADQSLDAIIRIYA-  160 (272)
T ss_pred             CCCCeEEEECCcC-CHHHHHHHHhcccccCCeEEEECCCHHHHHHHHHhCCCCeEEEeec-ccCCCcCCceeEEEEecC-
Confidence            4557788899863 66677776654    3479999999988888755544222221111 111111246999987654 


Q ss_pred             chhHHHHHHhcccCCEEEEEcC
Q 019199          255 DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       255 ~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +..+.++.+.|+|+|+++.+..
T Consensus       161 ~~~~~e~~rvLkpgG~li~~~p  182 (272)
T PRK11088        161 PCKAEELARVVKPGGIVITVTP  182 (272)
T ss_pred             CCCHHHHHhhccCCCEEEEEeC
Confidence            4448899999999999998753

>COG0111 SerA Phosphoglycerate dehydrogenase and related dehydrogenases [Amino acid transport and metabolism]

Probab=95.42  E-value=0.15  Score=46.45  Aligned_cols=108  Identities=22%  Similarity=0.286  Sum_probs=69.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~-  257 (344)
                      .|.+|-|+|.|.+|..+++.++.+|.+|++.++...+.. . ...+.   .-..   .++++-...|++.-.+.- +.| 
T Consensus       141 ~gkTvGIiG~G~IG~~va~~l~afgm~v~~~d~~~~~~~-~-~~~~~---~~~~---~Ld~lL~~sDiv~lh~PlT~eT~  212 (324)
T COG0111         141 AGKTVGIIGLGRIGRAVAKRLKAFGMKVIGYDPYSPRER-A-GVDGV---VGVD---SLDELLAEADILTLHLPLTPETR  212 (324)
T ss_pred             cCCEEEEECCCHHHHHHHHHHHhCCCeEEEECCCCchhh-h-ccccc---eecc---cHHHHHhhCCEEEEcCCCCcchh
Confidence            388999999999999999999999999999998333221 1 11221   1112   223333457888765552 221 


Q ss_pred             ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                         -...+..|+++..+|.++-..-             -+-+.+++.+++|++.
T Consensus       213 g~i~~~~~a~MK~gailIN~aRG~v-------------Vde~aL~~AL~~G~i~  253 (324)
T COG0111         213 GLINAEELAKMKPGAILINAARGGV-------------VDEDALLAALDSGKIA  253 (324)
T ss_pred             cccCHHHHhhCCCCeEEEECCCcce-------------ecHHHHHHHHHcCCcc
Confidence               2356677888887777653221             1346788888888885

>PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional

Probab=95.42  E-value=0.14  Score=44.95  Aligned_cols=74  Identities=22%  Similarity=0.211  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD---KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~---~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++...+...  +..+.+   ...|..+.+.+.+.       .+++|
T Consensus         7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   86 (260)
T PRK12823          7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAAELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRID   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHHHHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCCe
Confidence            4678999998 99999999999889999999988753222211  123432   22355554333221       25799


Q ss_pred             EEEECCC
Q 019199          247 FIIDTAS  253 (344)
Q Consensus       247 vvid~~g  253 (344)
                      +++.+.|
T Consensus        87 ~lv~nAg   93 (260)
T PRK12823         87 VLINNVG   93 (260)
T ss_pred             EEEECCc
Confidence            9999887

>PLN02396 hexaprenyldihydroxybenzoate methyltransferase

Probab=95.41  E-value=0.16  Score=46.23  Aligned_cols=95  Identities=18%  Similarity=0.210  Sum_probs=60.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-----cEEEeCCCHHHHHHhcCCccEEEEC--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-----DKFVVSSDLEQMKALGKSLDFIIDT--  251 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~~~~~~~dvvid~--  251 (344)
                      .+|.+||=+|+|. |..+..+++ .|++|++++.+++..+.+++....     ...+...+.+.+....+.||+|+..  
T Consensus       130 ~~g~~ILDIGCG~-G~~s~~La~-~g~~V~GID~s~~~i~~Ar~~~~~~~~~~~i~~~~~dae~l~~~~~~FD~Vi~~~v  207 (322)
T PLN02396        130 FEGLKFIDIGCGG-GLLSEPLAR-MGATVTGVDAVDKNVKIARLHADMDPVTSTIEYLCTTAEKLADEGRKFDAVLSLEV  207 (322)
T ss_pred             CCCCEEEEeeCCC-CHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHhcCcccceeEEecCHHHhhhccCCCCEEEEhhH
Confidence            4677888899853 445555554 688999999999988777543321     1111112222222223579999742  


Q ss_pred             ---CCC-chhHHHHHHhcccCCEEEEEc
Q 019199          252 ---ASG-DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       252 ---~g~-~~~~~~~~~~l~~~G~iv~~g  275 (344)
                         +.. ...+..+.+.|+|+|+++..-
T Consensus       208 LeHv~d~~~~L~~l~r~LkPGG~liist  235 (322)
T PLN02396        208 IEHVANPAEFCKSLSALTIPNGATVLST  235 (322)
T ss_pred             HHhcCCHHHHHHHHHHHcCCCcEEEEEE
Confidence               222 234778888999999998764

>PRK14618 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase; Provisional

Probab=95.41  E-value=0.087  Score=48.25  Aligned_cols=90  Identities=16%  Similarity=0.178  Sum_probs=63.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-------CCc---EEEeCCCHHHHHHhcCCccEEEEC
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-------GAD---KFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-------g~~---~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      -+|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+.+..       |..   .+....+.   .+.....|+|+-+
T Consensus         5 m~I~iIG~G~mG~~ia~~L~~~G~~V~~~~r~~~~~~~i~~~~~~~~~~~g~~~~~~~~~~~~~---~e~~~~aD~Vi~~   81 (328)
T PRK14618          5 MRVAVLGAGAWGTALAVLAASKGVPVRLWARRPEFAAALAAERENREYLPGVALPAELYPTADP---EEALAGADFAVVA   81 (328)
T ss_pred             CeEEEECcCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhCcccccCCCCcCCCCeEEeCCH---HHHHcCCCEEEEE
Confidence            3688999999999999998888999999999888776663221       210   01111122   2223568999999


Q ss_pred             CCCchhHHHHHHhcccCCEEEEEc
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +.... ...+++.++++-.++.+.
T Consensus        82 v~~~~-~~~v~~~l~~~~~vi~~~  104 (328)
T PRK14618         82 VPSKA-LRETLAGLPRALGYVSCA  104 (328)
T ss_pred             CchHH-HHHHHHhcCcCCEEEEEe
Confidence            98886 788888888877766663

>PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed

Probab=95.39  E-value=0.082  Score=45.92  Aligned_cols=75  Identities=23%  Similarity=0.201  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |.+|...+..+...|++|++++++.++...+.+   ..+...   ..|..+.+.+.+.       -+++
T Consensus         5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~   84 (251)
T PRK12826          5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL   84 (251)
T ss_pred             CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4578999997 999999999888889999999998665433322   223221   1244454433332       1478


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.+.
T Consensus        85 d~vi~~ag~   93 (251)
T PRK12826         85 DILVANAGI   93 (251)
T ss_pred             CEEEECCCC
Confidence            999998764

>PRK08703 short chain dehydrogenase; Provisional

Probab=95.39  E-value=0.12  Score=44.80  Aligned_cols=41  Identities=29%  Similarity=0.353  Sum_probs=35.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA  220 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~  220 (344)
                      .+.+++|+|+ |++|...++.+...|++|+++++++++.+.+
T Consensus         5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~   46 (239)
T PRK08703          5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKV   46 (239)
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHH
Confidence            4578999998 9999999999988999999999998876554

>PRK15181 Vi polysaccharide biosynthesis protein TviC; Provisional

Probab=95.39  E-value=0.11  Score=48.02  Aligned_cols=86  Identities=13%  Similarity=0.123  Sum_probs=55.4

Q ss_pred             HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHH----HHHHhCCC------cEE-EeCCC
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKE----EALSLLGA------DKF-VVSSD  234 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~----~~~~~~g~------~~~-v~~~~  234 (344)
                      |||.-++...+ -.+.+|||+|+ |-+|..++..+...|.+|+++++......    ......+.      ..+ .|-.+
T Consensus         2 ~~~~~~~~~~~-~~~~~vlVtGatGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~d   80 (348)
T PRK15181          2 TAYEELRTKLV-LAPKRWLITGVAGFIGSGLLEELLFLNQTVIGLDNFSTGYQHNLDDVRTSVSEEQWSRFIFIQGDIRK   80 (348)
T ss_pred             chhhhhhhccc-ccCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCCCcchhhhhhhhhccccccCCceEEEEccCCC
Confidence            56665544444 45578999997 99999999999999999999987543211    11111111      111 23444


Q ss_pred             HHHHHHhcCCccEEEECCC
Q 019199          235 LEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g  253 (344)
                      .+.+..+..++|+||.+.+
T Consensus        81 ~~~l~~~~~~~d~ViHlAa   99 (348)
T PRK15181         81 FTDCQKACKNVDYVLHQAA   99 (348)
T ss_pred             HHHHHHHhhCCCEEEECcc
Confidence            5555555567999999875

>TIGR00477 tehB tellurite resistance protein TehB

Probab=95.36  E-value=0.2  Score=42.21  Aligned_cols=95  Identities=16%  Similarity=0.141  Sum_probs=56.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKFVVSSDLEQMKALGKSLDFIIDTASG-  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-  254 (344)
                      .++.+||-+|+|. |..+..+++ .|.+|++++.+++-.+.+.+   ..+........+.... .....+|+|+....- 
T Consensus        29 ~~~~~vLDiGcG~-G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~I~~~~~~~  105 (195)
T TIGR00477        29 VAPCKTLDLGCGQ-GRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLPLRTDAYDINAA-ALNEDYDFIFSTVVFM  105 (195)
T ss_pred             CCCCcEEEeCCCC-CHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCCceeEeccchhc-cccCCCCEEEEecccc
Confidence            4567888899863 666777776 47899999999876655422   2232211111111111 123569999764321 


Q ss_pred             -------chhHHHHHHhcccCCEEEEEcC
Q 019199          255 -------DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       255 -------~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                             ...+..+.+.|+|+|+++.+..
T Consensus       106 ~~~~~~~~~~l~~~~~~LkpgG~lli~~~  134 (195)
T TIGR00477       106 FLQAGRVPEIIANMQAHTRPGGYNLIVAA  134 (195)
T ss_pred             cCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence                   2346778888999999655543

Part of a tellurite-reducing operon tehA and tehB

>PRK07791 short chain dehydrogenase; Provisional

Probab=95.34  E-value=0.11  Score=46.62  Aligned_cols=76  Identities=22%  Similarity=0.216  Sum_probs=50.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHh---CCCcE---EEeCCCHHHHHHh-
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST---------SKKEEALSL---LGADK---FVVSSDLEQMKAL-  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~---------~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-  241 (344)
                      -.+.++||+|+ +++|.+.++.+...|++|++++++.         ++.+.+.++   .|...   ..|-.+.+.+.+. 
T Consensus         4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   83 (286)
T PRK07791          4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV   83 (286)
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence            35788999987 9999999998888999999887664         443333222   23322   2344554433221 


Q ss_pred             ------cCCccEEEECCCC
Q 019199          242 ------GKSLDFIIDTASG  254 (344)
Q Consensus       242 ------~~~~dvvid~~g~  254 (344)
                            .+++|+++++.|.
T Consensus        84 ~~~~~~~g~id~lv~nAG~  102 (286)
T PRK07791         84 DAAVETFGGLDVLVNNAGI  102 (286)
T ss_pred             HHHHHhcCCCCEEEECCCC
Confidence                  2679999998874

>PLN02989 cinnamyl-alcohol dehydrogenase family protein

Probab=95.33  E-value=0.075  Score=48.43  Aligned_cols=74  Identities=22%  Similarity=0.176  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC---cEE--EeCCCHHHHHHhcCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA---DKF--VVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~---~~~--v~~~~~~~~~~~~~~~dvvid  250 (344)
                      .+.++||+|+ |.+|..++..+...|++|++++++.++.......   .+.   -..  .|..+.+.+.+...++|++|.
T Consensus         4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vih   83 (325)
T PLN02989          4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDEGSFELAIDGCETVFH   83 (325)
T ss_pred             CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCchHHHHHHcCCCEEEE
Confidence            4688999997 9999999999988999998887776543322111   121   111  244455555555567999999


Q ss_pred             CCC
Q 019199          251 TAS  253 (344)
Q Consensus       251 ~~g  253 (344)
                      +++
T Consensus        84 ~A~   86 (325)
T PLN02989         84 TAS   86 (325)
T ss_pred             eCC
Confidence            887

>PRK04266 fibrillarin; Provisional

Probab=95.33  E-value=0.27  Score=42.41  Aligned_cols=127  Identities=12%  Similarity=0.080  Sum_probs=71.4

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhC---CCcEEEeCC--CHHHHHHhcCCccEEE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLL---GADKFVVSS--DLEQMKALGKSLDFII  249 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~--~~~~~~~~~~~~dvvi  249 (344)
                      ..+++|++||=+|+|+ |.....+++..+ .+|++++.+++.++.+.+..   ..-..+..+  ++.....+...+|+++
T Consensus        68 l~i~~g~~VlD~G~G~-G~~~~~la~~v~~g~V~avD~~~~ml~~l~~~a~~~~nv~~i~~D~~~~~~~~~l~~~~D~i~  146 (226)
T PRK04266         68 FPIKKGSKVLYLGAAS-GTTVSHVSDIVEEGVVYAVEFAPRPMRELLEVAEERKNIIPILADARKPERYAHVVEKVDVIY  146 (226)
T ss_pred             CCCCCCCEEEEEccCC-CHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhhcCCcEEEECCCCCcchhhhccccCCEEE
Confidence            3458999999998753 555666677664 48999999987665442221   111222111  1111112234599998


Q ss_pred             ECCCCch----hHHHHHHhcccCCEEEEEcCC-CccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          250 DTASGDH----PFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       250 d~~g~~~----~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                      -....+.    .+..+.+.|+|+|+++.. .. ...++.     ....+.+++.++++.+.-++.
T Consensus       147 ~d~~~p~~~~~~L~~~~r~LKpGG~lvI~-v~~~~~d~~-----~~~~~~~~~~~~~l~~aGF~~  205 (226)
T PRK04266        147 QDVAQPNQAEIAIDNAEFFLKDGGYLLLA-IKARSIDVT-----KDPKEIFKEEIRKLEEGGFEI  205 (226)
T ss_pred             ECCCChhHHHHHHHHHHHhcCCCcEEEEE-EecccccCc-----CCHHHHHHHHHHHHHHcCCeE
Confidence            5444321    257888899999999884 11 111110     011133455667777655654

>PRK14166 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.31  E-value=0.19  Score=44.56  Aligned_cols=95  Identities=21%  Similarity=0.225  Sum_probs=72.1

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..+...+.--.|.+|+|+|- ..+|.=+..++...++.|++..+....+.                    
T Consensus       136 ~~PcTp~avi~lL~~y~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVt~chs~T~nl~--------------------  195 (282)
T PRK14166        136 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS--------------------  195 (282)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            467776666666666554468999999997 79999999999989999998776543332                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       196 -~~~~~ADIvIsAvGkp~~i~--~~~vk~GavVIDvGin  231 (282)
T PRK14166        196 -LYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN  231 (282)
T ss_pred             -HHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeccc
Confidence             22355899999999887433  4689999999999955

>cd01487 E1_ThiF_like E1_ThiF_like

Probab=95.30  E-value=0.14  Score=42.21  Aligned_cols=32  Identities=25%  Similarity=0.475  Sum_probs=27.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~  214 (344)
                      +|+|+|+|++|...++.+...|. +++++|...
T Consensus         1 ~VlViG~GglGs~ia~~La~~Gvg~i~lvD~D~   33 (174)
T cd01487           1 KVGIAGAGGLGSNIAVLLARSGVGNLKLVDFDV   33 (174)
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCeEEEEeCCE
Confidence            48899999999999999888999 799888764

Member of superfamily of activating enzymes (E1) of the ubiquitin-like proteins. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase

Probab=95.29  E-value=0.11  Score=45.20  Aligned_cols=73  Identities=23%  Similarity=0.215  Sum_probs=50.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHH-------HhcCCccE
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMK-------ALGKSLDF  247 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~-------~~~~~~dv  247 (344)
                      .++||+|+ |.+|...+..+...|++|++++++.++.+.+.+.   .+..   ...|..+.+.+.       +..+++|+
T Consensus         2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~   81 (255)
T TIGR01963         2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEFGGLDI   81 (255)
T ss_pred             CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCCCCE
Confidence            57999998 9999999999888999999999988766555332   2322   123555554332       22356899


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      +|.+.+.
T Consensus        82 vi~~a~~   88 (255)
T TIGR01963        82 LVNNAGI   88 (255)
T ss_pred             EEECCCC
Confidence            9987763

This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species.

>PF01209 Ubie_methyltran: ubiE/COQ5 methyltransferase family; InterPro: IPR004033 A number of methyltransferases have been shown to share regions of similarities []

Probab=95.29  E-value=0.029  Score=48.63  Aligned_cols=100  Identities=21%  Similarity=0.260  Sum_probs=60.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC---CC-cEEEeCCCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---GA-DKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~-~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ..++|++||-+|+|+ |..+..+++..+  .+|+++|-+++-++.++++.   +. ..-+...+.+.+.-....+|+|.-
T Consensus        44 ~~~~g~~vLDv~~Gt-G~~~~~l~~~~~~~~~v~~vD~s~~ML~~a~~k~~~~~~~~i~~v~~da~~lp~~d~sfD~v~~  122 (233)
T PF01209_consen   44 GLRPGDRVLDVACGT-GDVTRELARRVGPNGKVVGVDISPGMLEVARKKLKREGLQNIEFVQGDAEDLPFPDNSFDAVTC  122 (233)
T ss_dssp             T--S--EEEEET-TT-SHHHHHHGGGSS---EEEEEES-HHHHHHHHHHHHHTT--SEEEEE-BTTB--S-TT-EEEEEE
T ss_pred             CCCCCCEEEEeCCCh-HHHHHHHHHHCCCccEEEEecCCHHHHHHHHHHHHhhCCCCeeEEEcCHHHhcCCCCceeEEEH
Confidence            348899999998764 778888888775  48999999999888775443   21 111111111112111256899987


Q ss_pred             CCCC------chhHHHHHHhcccCCEEEEEcCC
Q 019199          251 TASG------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 ~~g~------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.|-      ...++++.+.|+|||+++.+.+.
T Consensus       123 ~fglrn~~d~~~~l~E~~RVLkPGG~l~ile~~  155 (233)
T PF01209_consen  123 SFGLRNFPDRERALREMYRVLKPGGRLVILEFS  155 (233)
T ss_dssp             ES-GGG-SSHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HhhHHhhCCHHHHHHHHHHHcCCCeEEEEeecc
Confidence            6652      24588999999999999888654

Apart from the ubiquinone/menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the ubiE gene of Escherichia coli), the ubiquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the COQ5 gene of Saccharomyces cerevisiae) and the menaquinone biosynthesis methyltransferases (for example, the C-methyltransferase from the MENH gene of Bacillus subtilis), this family also includes methyltransferases involved in biotin and sterol biosynthesis and in phosphatidylethanolamine methylation.; GO: 0008168 methyltransferase activity; PDB: 1VL5_C.

>PRK08762 molybdopterin biosynthesis protein MoeB; Validated

Probab=95.27  E-value=0.16  Score=47.49  Aligned_cols=77  Identities=22%  Similarity=0.289  Sum_probs=50.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC-------------------chhHHHHHHhC----CCcEEEeCC--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS-------------------TSKKEEALSLL----GADKFVVSS--  233 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~-------------------~~~~~~~~~~~----g~~~~v~~~--  233 (344)
                      .+.+|+|+|+|++|..++..+...|. ++++++..                   ..|.+.+.+.+    +...+....  
T Consensus       134 ~~~~VlvvG~GG~Gs~ia~~La~~Gvg~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~v~v~~~~~~  213 (376)
T PRK08762        134 LEARVLLIGAGGLGSPAALYLAAAGVGTLGIVDHDVVDRSNLQRQILHTEDRVGQPKVDSAAQRLAALNPDVQVEAVQER  213 (376)
T ss_pred             hcCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCEecchhhccccccchhhCCCcHHHHHHHHHHHHCCCCEEEEEecc
Confidence            55789999999999999999999999 88888876                   22333322222    212221111  


Q ss_pred             -CHHHHHHhcCCccEEEECCCCch
Q 019199          234 -DLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       234 -~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                       +.+...+...++|+|+|++.+..
T Consensus       214 ~~~~~~~~~~~~~D~Vv~~~d~~~  237 (376)
T PRK08762        214 VTSDNVEALLQDVDVVVDGADNFP  237 (376)
T ss_pred             CChHHHHHHHhCCCEEEECCCCHH
Confidence             12233344467999999999875

>PRK06997 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.26  E-value=0.11  Score=45.70  Aligned_cols=75  Identities=21%  Similarity=0.180  Sum_probs=49.7

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLGAD--KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+   +++|++.++.+...|++|+++.+.   .++++.+.++++..  ...|-.+++.+.+.       .++
T Consensus         5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   84 (260)
T PRK06997          5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG   84 (260)
T ss_pred             CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence            4678999983   589999888888899999887533   34444443445532  22355555443322       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        85 iD~lvnnAG~   94 (260)
T PRK06997         85 LDGLVHSIGF   94 (260)
T ss_pred             CcEEEEcccc
Confidence            9999998863

>PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated

Probab=95.26  E-value=0.12  Score=44.62  Aligned_cols=75  Identities=24%  Similarity=0.263  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKF---VVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~---v~~~~~~~~~~~-------~~~~  245 (344)
                      ++.++||+|+ |.+|...++.+...|.+|+++++++++.+....   ..+....   .|..+++.+.+.       -+.+
T Consensus         4 ~~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (246)
T PRK05653          4 QGKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGAL   83 (246)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            3568999998 999999999988899999999998876544322   2343222   344454433221       2568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        84 d~vi~~ag~   92 (246)
T PRK05653         84 DILVNNAGI   92 (246)
T ss_pred             CEEEECCCc
Confidence            999998864

>PRK08264 short chain dehydrogenase; Validated

Probab=95.26  E-value=0.15  Score=44.08  Aligned_cols=71  Identities=21%  Similarity=0.244  Sum_probs=51.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh---cCCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL---GKSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~---~~~~dvvid~  251 (344)
                      .+.+++|+|+ |.+|..+++.+...|+ +|++++++.++.+.    .+..   ...|..+.+.+.+.   .+.+|++|.+
T Consensus         5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~   80 (238)
T PRK08264          5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEAASDVTILVNN   80 (238)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHhcCCCCEEEEC
Confidence            4678999987 9999999999999999 99999988776542    3321   12344555544433   2468999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        81 ag~   83 (238)
T PRK08264         81 AGI   83 (238)
T ss_pred             CCc
Confidence            876

>PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.26  E-value=0.71  Score=40.04  Aligned_cols=97  Identities=18%  Similarity=0.122  Sum_probs=59.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHH---HHhCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEA---LSLLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~---~~~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      +.++||+|+ |.+|.+.++.+...|++|+...++. ++....   .+..+...   ..|..+.+.+.+.       .+++
T Consensus         6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   85 (252)
T PRK06077          6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVKENGGEGIGVLADVSTREGCETLAKATIDRYGVA   85 (252)
T ss_pred             CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHcCCeeEEEEeccCCHHHHHHHHHHHHHHcCCC
Confidence            578999998 9999999998888999987766442 322221   12334321   2344444333221       2578


Q ss_pred             cEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |++|.+.|...                         ..+.+++.++..|+++.++..
T Consensus        86 d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~  142 (252)
T PRK06077         86 DILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASV  142 (252)
T ss_pred             CEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcch
Confidence            99999887310                         122334455677899988765

>PLN02516 methylenetetrahydrofolate dehydrogenase (NADP+)

Probab=95.25  E-value=0.22  Score=44.61  Aligned_cols=95  Identities=20%  Similarity=0.184  Sum_probs=72.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+....+..|.....--.|.+++|+|- ..+|.=+..++...|++|++..+....+.                    
T Consensus       146 ~~PcTp~avi~lL~~~~i~l~Gk~vvVIGRS~iVGkPla~lL~~~~ATVtvchs~T~nl~--------------------  205 (299)
T PLN02516        146 FLPCTPKGCLELLSRSGIPIKGKKAVVVGRSNIVGLPVSLLLLKADATVTVVHSRTPDPE--------------------  205 (299)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            467776666766766655467999999997 79999999999999999999876533222                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+.  -+.++++..++++|..
T Consensus       206 -~~~~~ADIvv~AvGk~~~i~--~~~vk~gavVIDvGin  241 (299)
T PLN02516        206 -SIVREADIVIAAAGQAMMIK--GDWIKPGAAVIDVGTN  241 (299)
T ss_pred             -HHHhhCCEEEEcCCCcCccC--HHHcCCCCEEEEeecc
Confidence             22356899999999875332  4678999999999866

>PF01408 GFO_IDH_MocA: Oxidoreductase family, NAD-binding Rossmann fold; InterPro: IPR000683 This group of enzymes utilise NADP or NAD, and is known as the GFO/IDH/MOCA family in UniProtKB/Swiss-Prot

Probab=95.24  E-value=0.39  Score=36.54  Aligned_cols=88  Identities=22%  Similarity=0.272  Sum_probs=59.0

Q ss_pred             EEEEECCChHHHHHHHHHHHC--CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF--GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~--g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      ++.|+|+|..|.......+..  +.++. ++++++++.+.+.+++|.. .  +.+.+.+-+. .++|+|+-++....-..
T Consensus         2 ~v~iiG~G~~g~~~~~~~~~~~~~~~v~~v~d~~~~~~~~~~~~~~~~-~--~~~~~~ll~~-~~~D~V~I~tp~~~h~~   77 (120)
T PF01408_consen    2 RVGIIGAGSIGRRHLRALLRSSPDFEVVAVCDPDPERAEAFAEKYGIP-V--YTDLEELLAD-EDVDAVIIATPPSSHAE   77 (120)
T ss_dssp             EEEEESTSHHHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHTTSE-E--ESSHHHHHHH-TTESEEEEESSGGGHHH
T ss_pred             EEEEECCcHHHHHHHHHHHhcCCCcEEEEEEeCCHHHHHHHHHHhccc-c--hhHHHHHHHh-hcCCEEEEecCCcchHH
Confidence            578899999998887666655  44665 4566666777766788876 3  2333322221 37999999988776577


Q ss_pred             HHHHhcccCCEEEEEc
Q 019199          260 AYMSLLKVAGVYVLVG  275 (344)
Q Consensus       260 ~~~~~l~~~G~iv~~g  275 (344)
                      .+..+++.+- -+.+.
T Consensus        78 ~~~~~l~~g~-~v~~E   92 (120)
T PF01408_consen   78 IAKKALEAGK-HVLVE   92 (120)
T ss_dssp             HHHHHHHTTS-EEEEE
T ss_pred             HHHHHHHcCC-EEEEE
Confidence            7777777766 44553

GFO is a glucose--fructose oxidoreductase, which converts D-glucose and D-fructose into D-gluconolactone and D-glucitol in the sorbitol-gluconate pathway. MOCA is a rhizopine catabolism protein which may catalyse the NADH-dependent dehydrogenase reaction involved in rhizopine catabolism. Other proteins belonging to this family include Gal80, a negative regulator for the expression of lactose and galactose metabolic genes; and several hypothetical proteins from yeast, Escherichia coli and Bacillus subtilis. The oxidoreductase, N-terminal domain is almost always associated with the oxidoreductase, C-terminal domain (see IPR004104 from INTERPRO).; GO: 0016491 oxidoreductase activity; PDB: 1LC0_A 1LC3_A 1GCU_A 3IP3_E 3CEA_C 3EVN_A 3NTQ_A 3NTR_B 3NT5_A 3MZ0_A ....

>PRK08291 ectoine utilization protein EutC; Validated

Probab=95.24  E-value=0.1  Score=47.91  Aligned_cols=93  Identities=20%  Similarity=0.255  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHhC----CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSLL----GADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~~----g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      +...+++|+|+|..|.+.+..+.. .+. +|.+..++.++.+.+.+++    |.. +....+.   .+.-.+.|+|+.++
T Consensus       130 ~~~~~v~IiGaG~~a~~~~~al~~~~~~~~V~v~~R~~~~a~~l~~~~~~~~g~~-v~~~~d~---~~al~~aDiVi~aT  205 (330)
T PRK08291        130 EDASRAAVIGAGEQARLQLEALTLVRPIREVRVWARDAAKAEAYAADLRAELGIP-VTVARDV---HEAVAGADIIVTTT  205 (330)
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHhhccCce-EEEeCCH---HHHHccCCEEEEee
Confidence            445789999999999887776664 565 8999999988877765544    432 2222332   22235689999988


Q ss_pred             CCchh-HHHHHHhcccCCEEEEEcCC
Q 019199          253 SGDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       253 g~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.... +..  ..++++-.+..+|..
T Consensus       206 ~s~~p~i~~--~~l~~g~~v~~vg~d  229 (330)
T PRK08291        206 PSEEPILKA--EWLHPGLHVTAMGSD  229 (330)
T ss_pred             CCCCcEecH--HHcCCCceEEeeCCC
Confidence            76431 322  347888788888764

>PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated

Probab=95.24  E-value=0.12  Score=45.30  Aligned_cols=75  Identities=20%  Similarity=0.286  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ +++|...+..+...|++|++++++.++.+.+.+   ..+.+.   ..|..+.+.+.+.       -+++
T Consensus        10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~   89 (255)
T PRK06113         10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV   89 (255)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4788999998 999999999888899999999988776544322   223221   2355555443321       2578


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++.+.|.
T Consensus        90 d~li~~ag~   98 (255)
T PRK06113         90 DILVNNAGG   98 (255)
T ss_pred             CEEEECCCC
Confidence            999998873

>PRK07775 short chain dehydrogenase; Provisional

Probab=95.24  E-value=0.18  Score=44.78  Aligned_cols=74  Identities=19%  Similarity=0.243  Sum_probs=50.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEE---EeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKF---VVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~---v~~~~~~~~~~~-------~~~~d  246 (344)
                      ..++||+|+ |.+|.++++.+...|++|++++++.++.+.+.+   ..+....   .|..+.+.+.+.       .+++|
T Consensus        10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id   89 (274)
T PRK07775         10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE   89 (274)
T ss_pred             CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence            457999998 999999999888899999999887766544322   2343221   244554443322       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|.+.|.
T Consensus        90 ~vi~~Ag~   97 (274)
T PRK07775         90 VLVSGAGD   97 (274)
T ss_pred             EEEECCCc
Confidence            99998874

>PLN02986 cinnamyl-alcohol dehydrogenase family protein

Probab=95.24  E-value=0.099  Score=47.58  Aligned_cols=74  Identities=22%  Similarity=0.186  Sum_probs=49.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--h-CCC--c-EEE--eCCCHHHHHHhcCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS--L-LGA--D-KFV--VSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~--~-~g~--~-~~v--~~~~~~~~~~~~~~~dvvid  250 (344)
                      .|.+|||+|+ |.+|..++..+...|.+|+++.++.++.+...+  . .+.  . ..+  |..+.+.+.+...++|+||.
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~vih   83 (322)
T PLN02986          4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRKKTEHLLALDGAKERLKLFKADLLEESSFEQAIEGCDAVFH   83 (322)
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchHHHHHHHhccCCCCceEEEecCCCCcchHHHHHhCCCEEEE
Confidence            4689999997 999999999888889999988877654332211  1 111  1 111  33344445555567999998


Q ss_pred             CCC
Q 019199          251 TAS  253 (344)
Q Consensus       251 ~~g  253 (344)
                      +.+
T Consensus        84 ~A~   86 (322)
T PLN02986         84 TAS   86 (322)
T ss_pred             eCC
Confidence            876

>PRK14170 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.23  E-value=0.2  Score=44.48  Aligned_cols=95  Identities=16%  Similarity=0.156  Sum_probs=71.3

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+...+.--.|.+++|+|. ..+|.-+.+++...++.|++..+....+.                    
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvVvGrS~iVGkPla~lL~~~~atVtichs~T~~l~--------------------  195 (284)
T PRK14170        136 FVPCTPAGIIELIKSTGTQIEGKRAVVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLP--------------------  195 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            467776666666665554467999999997 79999999999999999998765543322                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+  --++++++..++++|..
T Consensus       196 -~~~~~ADIvI~AvG~~~~i--~~~~vk~GavVIDvGin  231 (284)
T PRK14170        196 -QVAKEADILVVATGLAKFV--KKDYIKPGAIVIDVGMD  231 (284)
T ss_pred             -HHHhhCCEEEEecCCcCcc--CHHHcCCCCEEEEccCc
Confidence             2235589999999988732  24678999999999866

>PRK07688 thiamine/molybdopterin biosynthesis ThiF/MoeB-like protein; Validated

Probab=95.23  E-value=0.13  Score=47.35  Aligned_cols=77  Identities=26%  Similarity=0.340  Sum_probs=50.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCch---------------------hHHHH---HHhCCCcEEEeC--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS---------------------KKEEA---LSLLGADKFVVS--  232 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~---------------------~~~~~---~~~~g~~~~v~~--  232 (344)
                      ...+|+|+|+|++|..+++.+...|. ++++++...-                     |.+.+   .+++..+.-+..  
T Consensus        23 ~~~~VlVvG~GglGs~va~~La~aGvg~i~lvD~D~Ve~sNL~RQ~l~~~~dig~g~~Ka~aa~~~l~~inp~v~v~~~~  102 (339)
T PRK07688         23 REKHVLIIGAGALGTANAEMLVRAGVGKVTIVDRDYVEWSNLQRQQLYTESDVKNNLPKAVAAKKRLEEINSDVRVEAIV  102 (339)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCccCHHHcCccccccHHHhcCCCcHHHHHHHHHHHHCCCcEEEEEe
Confidence            34779999999999999999999999 8999987531                     11111   123332211111  


Q ss_pred             --CCHHHHHHhcCCccEEEECCCCch
Q 019199          233 --SDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       233 --~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                        -..+...++..++|+|+|++.+..
T Consensus       103 ~~~~~~~~~~~~~~~DlVid~~Dn~~  128 (339)
T PRK07688        103 QDVTAEELEELVTGVDLIIDATDNFE  128 (339)
T ss_pred             ccCCHHHHHHHHcCCCEEEEcCCCHH
Confidence              123334445578999999998875

>PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated

Probab=95.22  E-value=0.26  Score=41.04  Aligned_cols=114  Identities=18%  Similarity=0.179  Sum_probs=71.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      +.++.+||-+|+|. |..++.+++.. +.+|+.++.+++..+.+++   ..+..  .++..+..   ....+.+|+++..
T Consensus        29 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~i~~~~~d~~---~~~~~~~D~v~~~  104 (187)
T PRK08287         29 LHRAKHLIDVGAGT-GSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGNIDIIPGEAP---IELPGKADAIFIG  104 (187)
T ss_pred             CCCCCEEEEECCcC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCCeEEEecCch---hhcCcCCCEEEEC
Confidence            46888999898864 66677777765 4699999999887666533   23322  22222211   1223579999864


Q ss_pred             CCC---chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          252 ASG---DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       252 ~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                      ...   ...+..+.+.|+++|+++.....              ....+++.+++.+..+..
T Consensus       105 ~~~~~~~~~l~~~~~~Lk~gG~lv~~~~~--------------~~~~~~~~~~l~~~g~~~  151 (187)
T PRK08287        105 GSGGNLTAIIDWSLAHLHPGGRLVLTFIL--------------LENLHSALAHLEKCGVSE  151 (187)
T ss_pred             CCccCHHHHHHHHHHhcCCCeEEEEEEec--------------HhhHHHHHHHHHHCCCCc
Confidence            321   22467788999999999764211              223456777777666643

>PRK08690 enoyl-(acyl carrier protein) reductase; Provisional

Probab=95.21  E-value=0.13  Score=45.35  Aligned_cols=75  Identities=11%  Similarity=0.118  Sum_probs=48.4

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGAD--KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+   +++|.+.++.+...|++|++..+.+.   +.+.+.++.|..  ...|-.+.+.+.++       .++
T Consensus         5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   84 (261)
T PRK08690          5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG   84 (261)
T ss_pred             CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence            4678999983   58999999888889999998765432   233332233422  22344555443322       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        85 iD~lVnnAG~   94 (261)
T PRK08690         85 LDGLVHSIGF   94 (261)
T ss_pred             CcEEEECCcc
Confidence            9999998864

>PRK13403 ketol-acid reductoisomerase; Provisional

Probab=95.20  E-value=0.19  Score=45.44  Aligned_cols=88  Identities=17%  Similarity=0.222  Sum_probs=61.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP-  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~-  257 (344)
                      -.|.+|.|+|-|.+|.+.++.++..|.+|++..+.....+.+ +..|+.. .      .+.+.....|+|+-++..+.+ 
T Consensus        14 LkgKtVGIIG~GsIG~amA~nL~d~G~~ViV~~r~~~s~~~A-~~~G~~v-~------sl~Eaak~ADVV~llLPd~~t~   85 (335)
T PRK13403         14 LQGKTVAVIGYGSQGHAQAQNLRDSGVEVVVGVRPGKSFEVA-KADGFEV-M------SVSEAVRTAQVVQMLLPDEQQA   85 (335)
T ss_pred             hCcCEEEEEeEcHHHHHHHHHHHHCcCEEEEEECcchhhHHH-HHcCCEE-C------CHHHHHhcCCEEEEeCCChHHH
Confidence            467899999999999999999999999999887664444444 4567532 1      233444669999988875432 


Q ss_pred             --H-HHHHHhcccCCEEEEE
Q 019199          258 --F-DAYMSLLKVAGVYVLV  274 (344)
Q Consensus       258 --~-~~~~~~l~~~G~iv~~  274 (344)
                        + ...+..++++..++..
T Consensus        86 ~V~~~eil~~MK~GaiL~f~  105 (335)
T PRK13403         86 HVYKAEVEENLREGQMLLFS  105 (335)
T ss_pred             HHHHHHHHhcCCCCCEEEEC
Confidence              2 2356667887766544

>PRK14183 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.20  E-value=0.23  Score=44.08  Aligned_cols=95  Identities=16%  Similarity=0.193  Sum_probs=70.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      ..||+.......+.....--.|.+++|+|. ..+|.-...++...|+.|++..+....+.                    
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~~VG~Pla~lL~~~~AtVti~hs~T~~l~--------------------  195 (281)
T PRK14183        136 FVPCTPLGVMELLEEYEIDVKGKDVCVVGASNIVGKPMAALLLNANATVDICHIFTKDLK--------------------  195 (281)
T ss_pred             CCCCcHHHHHHHHHHcCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCcCHH--------------------
Confidence            467766666666665554468999999997 69999999999999999987654432221                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+  --++++++..++++|..
T Consensus       196 -~~~~~ADIvV~AvGkp~~i--~~~~vk~gavvIDvGin  231 (281)
T PRK14183        196 -AHTKKADIVIVGVGKPNLI--TEDMVKEGAIVIDIGIN  231 (281)
T ss_pred             -HHHhhCCEEEEecCccccc--CHHHcCCCcEEEEeecc
Confidence             2235699999999988733  25688999999999855

>PF03446 NAD_binding_2: NAD binding domain of 6-phosphogluconate dehydrogenase; InterPro: IPR006115 6-Phosphogluconate dehydrogenase (1

Probab=95.19  E-value=0.45  Score=38.71  Aligned_cols=86  Identities=26%  Similarity=0.324  Sum_probs=56.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                      +|-++|.|.+|...+.-+...|.+|++.+++.++.+.+. +.|+...  .+..+..    .+.|+||-++........++
T Consensus         3 ~Ig~IGlG~mG~~~a~~L~~~g~~v~~~d~~~~~~~~~~-~~g~~~~--~s~~e~~----~~~dvvi~~v~~~~~v~~v~   75 (163)
T PF03446_consen    3 KIGFIGLGNMGSAMARNLAKAGYEVTVYDRSPEKAEALA-EAGAEVA--DSPAEAA----EQADVVILCVPDDDAVEAVL   75 (163)
T ss_dssp             EEEEE--SHHHHHHHHHHHHTTTEEEEEESSHHHHHHHH-HTTEEEE--SSHHHHH----HHBSEEEE-SSSHHHHHHHH
T ss_pred             EEEEEchHHHHHHHHHHHHhcCCeEEeeccchhhhhhhH-Hhhhhhh--hhhhhHh----hcccceEeecccchhhhhhh
Confidence            577889999999999999889999999999999988884 5563322  2222222    23689998888755455544


Q ss_pred             Hh------cccCCEEEEEc
Q 019199          263 SL------LKVAGVYVLVG  275 (344)
Q Consensus       263 ~~------l~~~G~iv~~g  275 (344)
                      ..      ++++..+++++
T Consensus        76 ~~~~i~~~l~~g~iiid~s   94 (163)
T PF03446_consen   76 FGENILAGLRPGKIIIDMS   94 (163)
T ss_dssp             HCTTHGGGS-TTEEEEE-S
T ss_pred             hhhHHhhccccceEEEecC
Confidence            43      45555666664

1.1.44 from EC) (6PGD) is an oxidative carboxylase that catalyses the decarboxylating reduction of 6-phosphogluconate into ribulose 5-phosphate in the presence of NADP. This reaction is a component of the hexose mono-phosphate shunt and pentose phosphate pathways (PPP) [, ]. Prokaryotic and eukaryotic 6PGD are proteins of about 470 amino acids whose sequence are highly conserved []. The protein is a homodimer in which the monomers act independently []: each contains a large, mainly alpha-helical domain and a smaller beta-alpha-beta domain, containing a mixed parallel and anti-parallel 6-stranded beta sheet []. NADP is bound in a cleft in the small domain, the substrate binding in an adjacent pocket []. This family represents the NADP binding domain of 6-phosphogluconate dehydrogenase which adopts a Rossman fold. The C-terminal domain is described in IPR006114 from INTERPRO.; GO: 0004616 phosphogluconate dehydrogenase (decarboxylating) activity, 0006098 pentose-phosphate shunt, 0055114 oxidation-reduction process; PDB: 3AX6_D 3PDU_G 3Q3C_A 3OBB_A 4DLL_B 1PGP_A 1PGN_A 2PGD_A 1PGQ_A 1PGO_A ....

>PRK14184 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.19  E-value=0.21  Score=44.44  Aligned_cols=95  Identities=23%  Similarity=0.217  Sum_probs=71.2

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHH----CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKA----FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~----~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      .+||+....+..|.....--.|.+++|+|. ..+|.=+..++..    .+++|+...+....+...              
T Consensus       136 ~~PcTp~av~~lL~~~~i~l~Gk~vvViGrS~iVG~Pla~lL~~~~~~~~AtVt~~hs~t~~l~~~--------------  201 (286)
T PRK14184        136 FRPCTPAGVMTLLERYGLSPAGKKAVVVGRSNIVGKPLALMLGAPGKFANATVTVCHSRTPDLAEE--------------  201 (286)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhCCcccCCCEEEEEeCCchhHHHH--------------
Confidence            467776666666766665468999999997 7999999999887    789998887654433222              


Q ss_pred             HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                             .+.+|+++-++|.+..+.  -+.++++..++++|..
T Consensus       202 -------~~~ADIVI~AvG~p~li~--~~~vk~GavVIDVGi~  235 (286)
T PRK14184        202 -------CREADFLFVAIGRPRFVT--ADMVKPGAVVVDVGIN  235 (286)
T ss_pred             -------HHhCCEEEEecCCCCcCC--HHHcCCCCEEEEeeee
Confidence                   245899999999887433  3677999999999865

>PRK06522 2-dehydropantoate 2-reductase; Reviewed

Probab=95.19  E-value=0.12  Score=46.59  Aligned_cols=89  Identities=13%  Similarity=0.154  Sum_probs=57.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeC--CCHHHHHHhcCCccEEEECCCCchh
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVS--SDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~--~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      ++.|+|+|.+|.+.+..+...|.+|+++++++++.+.+. +.|...   -...  ...+..... ..+|++|-++.... 
T Consensus         2 ~I~IiG~G~~G~~~a~~L~~~g~~V~~~~r~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~~~~-~~~d~vila~k~~~-   78 (304)
T PRK06522          2 KIAILGAGAIGGLFGAALAQAGHDVTLVARRGAHLDALN-ENGLRLEDGEITVPVLAADDPAEL-GPQDLVILAVKAYQ-   78 (304)
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECChHHHHHHH-HcCCcccCCceeecccCCCChhHc-CCCCEEEEeccccc-
Confidence            588999999999988888888999999999877777663 445321   0000  000111222 67999999888665 


Q ss_pred             HHHHHHhccc----CCEEEEE
Q 019199          258 FDAYMSLLKV----AGVYVLV  274 (344)
Q Consensus       258 ~~~~~~~l~~----~G~iv~~  274 (344)
                      ...+++.+++    +..++.+
T Consensus        79 ~~~~~~~l~~~l~~~~~iv~~   99 (304)
T PRK06522         79 LPAALPSLAPLLGPDTPVLFL   99 (304)
T ss_pred             HHHHHHHHhhhcCCCCEEEEe
Confidence            5666655543    4456554

>PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional

Probab=95.18  E-value=0.12  Score=45.25  Aligned_cols=74  Identities=19%  Similarity=0.095  Sum_probs=49.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCC-c---EEEeCCCHHHHHHh-------cCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGA-D---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~-~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      +.++||+|+ |.+|.+.+..+...|++|+.++++.++.+.+.++    .+. .   ...|..+.+.+...       -++
T Consensus         2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~   81 (259)
T PRK12384          2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR   81 (259)
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            467999998 9999999998888899999999887655443222    221 1   12244444333221       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++.+.|.
T Consensus        82 id~vv~~ag~   91 (259)
T PRK12384         82 VDLLVYNAGI   91 (259)
T ss_pred             CCEEEECCCc
Confidence            8999998873

>PRK14187 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.17  E-value=0.21  Score=44.57  Aligned_cols=95  Identities=16%  Similarity=0.121  Sum_probs=72.3

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......|.....--.|.+++|+|. ..+|.-+..++...+++|++..+....+.                    
T Consensus       139 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~aTVt~chs~T~~l~--------------------  198 (294)
T PRK14187        139 LIPCTPKGCLYLIKTITRNLSGSDAVVIGRSNIVGKPMACLLLGENCTVTTVHSATRDLA--------------------  198 (294)
T ss_pred             ccCcCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHhhCCCEEEEeCCCCCCHH--------------------
Confidence            457766666666766655578999999997 79999999999999999998876543332                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+  --+.++++..++++|..
T Consensus       199 -~~~~~ADIvVsAvGkp~~i--~~~~ik~gaiVIDVGin  234 (294)
T PRK14187        199 -DYCSKADILVAAVGIPNFV--KYSWIKKGAIVIDVGIN  234 (294)
T ss_pred             -HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence             2235589999999988732  25678999999999865

>PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional

Probab=95.17  E-value=0.12  Score=45.46  Aligned_cols=74  Identities=24%  Similarity=0.249  Sum_probs=48.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHH----hCCCc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALS----LLGAD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~----~~g~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ +++|.+.+..+...|++|+++.++ +++.+.+.+    ..+..   ..+|-.+++.+.+.       -+
T Consensus         7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g   86 (260)
T PRK08416          7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD   86 (260)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence            4689999998 999999999988899999887653 444433222    22322   12344555443322       25


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|+++++.|
T Consensus        87 ~id~lv~nAg   96 (260)
T PRK08416         87 RVDFFISNAI   96 (260)
T ss_pred             CccEEEECcc
Confidence            7899999875

>PRK08628 short chain dehydrogenase; Provisional

Probab=95.17  E-value=0.15  Score=44.56  Aligned_cols=75  Identities=20%  Similarity=0.080  Sum_probs=50.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD---KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~---~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .|.++||+|+ |++|...++.+...|++|+++++++++.+...  +..+..   ...|..+.+.+.+.       .+++|
T Consensus         6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   85 (258)
T PRK08628          6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID   85 (258)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence            4678999998 99999999888889999999988877652221  123322   22344444433322       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|.+.|.
T Consensus        86 ~vi~~ag~   93 (258)
T PRK08628         86 GLVNNAGV   93 (258)
T ss_pred             EEEECCcc
Confidence            99999883

>PRK10258 biotin biosynthesis protein BioC; Provisional

Probab=95.16  E-value=0.15  Score=44.68  Aligned_cols=144  Identities=15%  Similarity=0.156  Sum_probs=82.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC----
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG----  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~----  254 (344)
                      .++.+||-+|+|. |..+..+++ .|.+|+.++.+++.++.+++.......+..+- +.+.-....+|+|+....-    
T Consensus        41 ~~~~~vLDiGcG~-G~~~~~l~~-~~~~v~~~D~s~~~l~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~V~s~~~l~~~~  117 (251)
T PRK10258         41 RKFTHVLDAGCGP-GWMSRYWRE-RGSQVTALDLSPPMLAQARQKDAADHYLAGDI-ESLPLATATFDLAWSNLAVQWCG  117 (251)
T ss_pred             cCCCeEEEeeCCC-CHHHHHHHH-cCCeEEEEECCHHHHHHHHhhCCCCCEEEcCc-ccCcCCCCcEEEEEECchhhhcC
Confidence            4678899999865 655555554 57899999999998888854433222222111 1111112469999865431    


Q ss_pred             --chhHHHHHHhcccCCEEEEEcCC-Cccc-cC---------CceeeeechHhHHHHHHHHHhCCCccce--EEEeCccH
Q 019199          255 --DHPFDAYMSLLKVAGVYVLVGFP-SKVK-FS---------PASLNIGGTKDTQEMLEYCAAHKIYPQI--ETIPIENV  319 (344)
Q Consensus       255 --~~~~~~~~~~l~~~G~iv~~g~~-~~~~-~~---------~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~~~~  319 (344)
                        ...+.++.+.|+|+|.++..... .... +.         ........   .+++.+++..-.+....  -...+++.
T Consensus       118 d~~~~l~~~~~~Lk~gG~l~~~~~~~~~~~el~~~~~~~~~~~~~~~~~~---~~~l~~~l~~~~~~~~~~~~~~~f~~~  194 (251)
T PRK10258        118 NLSTALRELYRVVRPGGVVAFTTLVQGSLPELHQAWQAVDERPHANRFLP---PDAIEQALNGWRYQHHIQPITLWFDDA  194 (251)
T ss_pred             CHHHHHHHHHHHcCCCeEEEEEeCCCCchHHHHHHHHHhccCCccccCCC---HHHHHHHHHhCCceeeeeEEEEECCCH
Confidence              23477888899999999877543 1110 00         00000112   33344444443343332  34578888


Q ss_pred             HHHHHHHHc
Q 019199          320 NEALERLIK  328 (344)
Q Consensus       320 ~~a~~~~~~  328 (344)
                      .+.++.++.
T Consensus       195 ~~~l~~lk~  203 (251)
T PRK10258        195 LSAMRSLKG  203 (251)
T ss_pred             HHHHHHHHH
Confidence            888887775

>PF00899 ThiF: ThiF family; InterPro: IPR000594 Ubiquitin-activating enzyme (E1 enzyme) [, ] activates ubiquitin by first adenylating with ATP its C-terminal glycine residue and thereafter linking this residue to the side chain of a cysteine residue in E1, yielding an ubiquitin-E1 thiolester and free AMP

Probab=95.16  E-value=0.11  Score=40.80  Aligned_cols=91  Identities=22%  Similarity=0.234  Sum_probs=53.2

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCch-------------------hHHHHH---HhC-CCcEEEeC---C
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS-------------------KKEEAL---SLL-GADKFVVS---S  233 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~-------------------~~~~~~---~~~-g~~~~v~~---~  233 (344)
                      ..+|+|+|+|++|..++..+-..|. +++++|...-                   |.+.+.   +++ +...+...   -
T Consensus         2 ~~~v~iiG~G~vGs~va~~L~~~Gv~~i~lvD~d~v~~~nl~r~~~~~~~~vG~~Ka~~~~~~l~~~np~~~v~~~~~~~   81 (135)
T PF00899_consen    2 NKRVLIIGAGGVGSEVAKNLARSGVGKITLVDDDIVEPSNLNRQFLYTEEDVGKNKAEAAKERLQEINPDVEVEAIPEKI   81 (135)
T ss_dssp             T-EEEEESTSHHHHHHHHHHHHHTTSEEEEEESSBB-GGGCCTCTTS-GGGTTSBHHHHHHHHHHHHSTTSEEEEEESHC
T ss_pred             CCEEEEECcCHHHHHHHHHHHHhCCCceeecCCcceeecccccccccccccchhHHHHHHHHHHHHhcCceeeeeeeccc
Confidence            4689999999999999999888899 8888885411                   111111   122 22111111   1


Q ss_pred             CHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEE
Q 019199          234 DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVY  271 (344)
Q Consensus       234 ~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~i  271 (344)
                      +.+...+..+++|+||+|..+...-..+.+..+..++-
T Consensus        82 ~~~~~~~~~~~~d~vi~~~d~~~~~~~l~~~~~~~~~p  119 (135)
T PF00899_consen   82 DEENIEELLKDYDIVIDCVDSLAARLLLNEICREYGIP  119 (135)
T ss_dssp             SHHHHHHHHHTSSEEEEESSSHHHHHHHHHHHHHTT-E
T ss_pred             ccccccccccCCCEEEEecCCHHHHHHHHHHHHHcCCC
Confidence            12333344468999999999866444444444444443

Later the ubiquitin moiety is transferred to a cysteine residue on one of the many forms of ubiquitin- conjugating enzymes (E2). The family of ubiquitin-activating enzymes shares in its catalytic domain significant similarity with a large family of NAD/FAD-binding proteins. This domain is based on the common NAD/FAD-binding fold and finds members of several families, including UBA ubiquitin activating enzymes; the hesA/moeB/thiF family; NADH peroxidases; the LDH family; sarcosin oxidase; phytoene dehydrogenases; alanine dehydrogenases; hydroxyacyl-CoA dehydrogenases and many other NAD/FAD dependent dehydrogenases and oxidases.; GO: 0003824 catalytic activity; PDB: 1ZKM_D 1ZUD_3 1ZFN_D 1R4M_G 2NVU_A 1R4N_C 3DBR_A 3DBH_C 3DBL_G 1YOV_A ....

>TIGR02752 MenG_heptapren 2-heptaprenyl-1,4-naphthoquinone methyltransferase

Probab=95.16  E-value=0.16  Score=43.91  Aligned_cols=99  Identities=16%  Similarity=0.149  Sum_probs=62.0

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHhcCCccEE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..++++++||-+|+|. |..+..+++..+  .+|+.++.+++..+.+.+.+   +.+  .++..+.. ......+.+|+|
T Consensus        41 l~~~~~~~vLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~-~~~~~~~~fD~V  118 (231)
T TIGR02752        41 MNVQAGTSALDVCCGT-ADWSIALAEAVGPEGHVIGLDFSENMLSVGRQKVKDAGLHNVELVHGNAM-ELPFDDNSFDYV  118 (231)
T ss_pred             cCCCCCCEEEEeCCCc-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEechh-cCCCCCCCccEE
Confidence            3447899999999863 667778887754  58999999988776664332   221  11211111 111112568998


Q ss_pred             EECCC-----C-chhHHHHHHhcccCCEEEEEcC
Q 019199          249 IDTAS-----G-DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       249 id~~g-----~-~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +-...     . ...+..+.+.|+|+|+++....
T Consensus       119 ~~~~~l~~~~~~~~~l~~~~~~Lk~gG~l~~~~~  152 (231)
T TIGR02752       119 TIGFGLRNVPDYMQVLREMYRVVKPGGKVVCLET  152 (231)
T ss_pred             EEecccccCCCHHHHHHHHHHHcCcCeEEEEEEC
Confidence            75322     1 2236778889999999987643

MenG is a generic term for a methyltransferase that catalyzes the last step in menaquinone biosynthesis; the exact enzymatic activity differs for different MenG because the menaquinone differ in their prenoid side chains in different species. Members of this MenG protein family are 2-heptaprenyl-1,4-naphthoquinone methyltransferase, and are found together in operons with the two subunits of the heptaprenyl diphosphate synthase in Bacillus subtilis and related species.

>PRK08303 short chain dehydrogenase; Provisional

Probab=95.16  E-value=0.12  Score=46.82  Aligned_cols=74  Identities=30%  Similarity=0.239  Sum_probs=49.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----------hhHHHHH---HhCCCc---EEEeCCCHHHHHHh-
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----------SKKEEAL---SLLGAD---KFVVSSDLEQMKAL-  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----------~~~~~~~---~~~g~~---~~v~~~~~~~~~~~-  241 (344)
                      .|.++||+|+ +++|.++++.+...|++|++++++.          ++.+.+.   +..|..   ...|-.+++.+++. 
T Consensus         7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~   86 (305)
T PRK08303          7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRSTRARRSEYDRPETIEETAELVTAAGGRGIAVQVDHLVPEQVRALV   86 (305)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecccccccccccccchHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHH
Confidence            4678999998 8999999999988999999988863          3333221   233422   12344454433322 


Q ss_pred             ------cCCccEEEECC-C
Q 019199          242 ------GKSLDFIIDTA-S  253 (344)
Q Consensus       242 ------~~~~dvvid~~-g  253 (344)
                            -+++|+++++. |
T Consensus        87 ~~~~~~~g~iDilVnnA~g  105 (305)
T PRK08303         87 ERIDREQGRLDILVNDIWG  105 (305)
T ss_pred             HHHHHHcCCccEEEECCcc
Confidence                  25799999987 5

>TIGR02354 thiF_fam2 thiamine biosynthesis protein ThiF, family 2

Probab=95.14  E-value=0.16  Score=42.97  Aligned_cols=34  Identities=21%  Similarity=0.364  Sum_probs=29.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      ...+|+|+|+|++|...++.+...|. +++++|..
T Consensus        20 ~~~~V~IvG~GglGs~ia~~La~~Gvg~i~lvD~D   54 (200)
T TIGR02354        20 EQATVAICGLGGLGSNVAINLARAGIGKLILVDFD   54 (200)
T ss_pred             hCCcEEEECcCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            34779999999999999999988999 79988877

Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with one the E. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the divergent clade of putative ThiF proteins such found in Campylobacter.

>PRK06953 short chain dehydrogenase; Provisional

Probab=95.14  E-value=0.17  Score=43.30  Aligned_cols=72  Identities=22%  Similarity=0.269  Sum_probs=51.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh----c-CCccEEEECCCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL----G-KSLDFIIDTASG  254 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~----~-~~~dvvid~~g~  254 (344)
                      .+++|+|+ |++|...++.+...|++|++++++.+..+.+ +..+.. ...|-.+.+.+.+.    . .++|+++.+.|.
T Consensus         2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~   80 (222)
T PRK06953          2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAAL-QALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV   80 (222)
T ss_pred             ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHH-HhccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence            46889987 9999999988888899999999988777666 344532 33455555444332    2 468999998764

>PRK06932 glycerate dehydrogenase; Provisional

Probab=95.14  E-value=0.18  Score=45.83  Aligned_cols=104  Identities=21%  Similarity=0.284  Sum_probs=70.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~-  257 (344)
                      .|.+|.|+|.|.+|...+++++.+|++|+..++....      .....    ..   .+.++-...|+|.-+... +.+ 
T Consensus       146 ~gktvgIiG~G~IG~~va~~l~~fg~~V~~~~~~~~~------~~~~~----~~---~l~ell~~sDiv~l~~Plt~~T~  212 (314)
T PRK06932        146 RGSTLGVFGKGCLGTEVGRLAQALGMKVLYAEHKGAS------VCREG----YT---PFEEVLKQADIVTLHCPLTETTQ  212 (314)
T ss_pred             CCCEEEEECCCHHHHHHHHHHhcCCCEEEEECCCccc------ccccc----cC---CHHHHHHhCCEEEEcCCCChHHh
Confidence            5789999999999999999999999999988754321      11100    11   233334558998877663 221 


Q ss_pred             ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                         -...++.|+++..+|.++-..-+             +-+.+++.+.+|++.-
T Consensus       213 ~li~~~~l~~mk~ga~lIN~aRG~~V-------------de~AL~~aL~~g~i~g  254 (314)
T PRK06932        213 NLINAETLALMKPTAFLINTGRGPLV-------------DEQALLDALENGKIAG  254 (314)
T ss_pred             cccCHHHHHhCCCCeEEEECCCcccc-------------CHHHHHHHHHcCCccE
Confidence               24677889999999988643111             2456777788888853

>PLN02819 lysine-ketoglutarate reductase/saccharopine dehydrogenase

Probab=95.13  E-value=0.24  Score=51.95  Aligned_cols=96  Identities=15%  Similarity=0.150  Sum_probs=69.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHC-CCe-------------EEEEeCCchhHHHHHHhC-CCc-EEEeCCCHHHHHHhcC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAF-GLN-------------VTVLSTSTSKKEEALSLL-GAD-KFVVSSDLEQMKALGK  243 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~-g~~-------------V~~~~~~~~~~~~~~~~~-g~~-~~v~~~~~~~~~~~~~  243 (344)
                      ...+|+|+|+|.+|...+..+... +++             |++.+.+.++.+.+.+.+ +.+ ..+|..+.+.+.+...
T Consensus       568 ~~~rIlVLGAG~VG~~~a~~La~~~~~~~~~~~~~~~~~~lV~VaD~~~~~a~~la~~~~~~~~v~lDv~D~e~L~~~v~  647 (1042)
T PLN02819        568 KSQNVLILGAGRVCRPAAEYLASVKTISYYGDDSEEPTDVHVIVASLYLKDAKETVEGIENAEAVQLDVSDSESLLKYVS  647 (1042)
T ss_pred             cCCcEEEECCCHHHHHHHHHHHhCcCccccccccccccccEEEEECCCHHHHHHHHHhcCCCceEEeecCCHHHHHHhhc
Confidence            466899999999999988888653 334             788888877777665555 432 3556677776666556


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ++|+|+.+++.......+..+++.+-.++...
T Consensus       648 ~~DaVIsalP~~~H~~VAkaAieaGkHvv~ek  679 (1042)
T PLN02819        648 QVDVVISLLPASCHAVVAKACIELKKHLVTAS  679 (1042)
T ss_pred             CCCEEEECCCchhhHHHHHHHHHcCCCEEECc
Confidence            69999999997655677777777776665553

>PRK09135 pteridine reductase; Provisional

Probab=95.13  E-value=0.15  Score=44.22  Aligned_cols=74  Identities=18%  Similarity=0.152  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHH---hC-CCc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALS---LL-GAD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~---~~-g~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |.+|..++..+...|++|++++++.+ +.+...+   .. +..   ...|..+.+.+.+.       .+
T Consensus         5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   84 (249)
T PRK09135          5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG   84 (249)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            4578999998 99999999988889999999988643 3332211   11 111   22344554443322       25


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|++|.+.|
T Consensus        85 ~~d~vi~~ag   94 (249)
T PRK09135         85 RLDALVNNAS   94 (249)
T ss_pred             CCCEEEECCC
Confidence            6899999887

>PLN02896 cinnamyl-alcohol dehydrogenase

Probab=95.12  E-value=0.16  Score=46.88  Aligned_cols=75  Identities=20%  Similarity=0.172  Sum_probs=51.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--CCc-EEE--eCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--GAD-KFV--VSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--g~~-~~v--~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      ..+.+|||+|+ |.+|..+++.+...|.+|++++++.++...+...+  +.. ..+  |..+.+.+.+...++|+||.+.
T Consensus         8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~d~Vih~A   87 (353)
T PLN02896          8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEEGSFDEAVKGCDGVFHVA   87 (353)
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCHHHHHHHHcCCCEEEECC
Confidence            56778999997 99999999999889999999888766544332222  111 112  3344555555556789999877


Q ss_pred             C
Q 019199          253 S  253 (344)
Q Consensus       253 g  253 (344)
                      +
T Consensus        88 ~   88 (353)
T PLN02896         88 A   88 (353)
T ss_pred             c
Confidence            6

>PRK08328 hypothetical protein; Provisional

Probab=95.12  E-value=0.26  Score=42.73  Aligned_cols=93  Identities=19%  Similarity=0.250  Sum_probs=55.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH-----------------------HHhCCCcEEEeCC--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA-----------------------LSLLGADKFVVSS--  233 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~-----------------------~~~~g~~~~v~~~--  233 (344)
                      .+.+|+|+|+|++|..++..+...|. +++++|...-+...+                       .+++..+..++..  
T Consensus        26 ~~~~VlIiG~GGlGs~ia~~La~~Gvg~i~lvD~D~ve~sNL~Rq~l~~~~dvG~~~k~~~a~~~l~~~np~v~v~~~~~  105 (231)
T PRK08328         26 KKAKVAVVGVGGLGSPVAYYLAAAGVGRILLIDEQTPELSNLNRQILHWEEDLGKNPKPLSAKWKLERFNSDIKIETFVG  105 (231)
T ss_pred             hCCcEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCccChhhhccccccChhhcCchHHHHHHHHHHHHhCCCCEEEEEec
Confidence            34779999999999999999999998 888887443221111                       1222222112111  


Q ss_pred             --CHHHHHHhcCCccEEEECCCCchhHHHHHH--hcccCCEEEE
Q 019199          234 --DLEQMKALGKSLDFIIDTASGDHPFDAYMS--LLKVAGVYVL  273 (344)
Q Consensus       234 --~~~~~~~~~~~~dvvid~~g~~~~~~~~~~--~l~~~G~iv~  273 (344)
                        ..+...+.-+++|+|+|++.+.. .+..+.  +.+.+=.++.
T Consensus       106 ~~~~~~~~~~l~~~D~Vid~~d~~~-~r~~l~~~~~~~~ip~i~  148 (231)
T PRK08328        106 RLSEENIDEVLKGVDVIVDCLDNFE-TRYLLDDYAHKKGIPLVH  148 (231)
T ss_pred             cCCHHHHHHHHhcCCEEEECCCCHH-HHHHHHHHHHHcCCCEEE
Confidence              12223333467999999999866 455555  3344433443

>PRK14171 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.10  E-value=0.23  Score=44.15  Aligned_cols=95  Identities=14%  Similarity=0.209  Sum_probs=70.5

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+.....--.|.+++|+|. ..+|.=+..++...++.|++..+....+.                    
T Consensus       138 ~~PcTp~av~~lL~~y~i~l~GK~vvViGrS~iVGkPla~lL~~~~ATVtichs~T~~L~--------------------  197 (288)
T PRK14171        138 FIPCTALGCLAVIKKYEPNLTGKNVVIIGRSNIVGKPLSALLLKENCSVTICHSKTHNLS--------------------  197 (288)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            466666666666665554468999999997 79999999999999999998775543332                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       198 -~~~~~ADIvV~AvGkp~~i~--~~~vk~GavVIDvGin  233 (288)
T PRK14171        198 -SITSKADIVVAAIGSPLKLT--AEYFNPESIVIDVGIN  233 (288)
T ss_pred             -HHHhhCCEEEEccCCCCccC--HHHcCCCCEEEEeecc
Confidence             22355899999999876332  4688999999999855

>PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional

Probab=95.08  E-value=0.11  Score=45.01  Aligned_cols=74  Identities=24%  Similarity=0.298  Sum_probs=49.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      +.++||+|+ |.+|...+..+...|++|+++ +++.++.+.+.+.   .+...   ..|..+.+.+.+.       .+++
T Consensus         5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   84 (247)
T PRK05565          5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI   84 (247)
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            468999987 999999998888889999988 8877665443222   22221   1244444433322       1479


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|.+.|.
T Consensus        85 d~vi~~ag~   93 (247)
T PRK05565         85 DILVNNAGI   93 (247)
T ss_pred             CEEEECCCc
Confidence            999998874

>cd00755 YgdL_like Family of activating enzymes (E1) of ubiquitin-like proteins related to the E

Probab=95.08  E-value=0.71  Score=39.94  Aligned_cols=33  Identities=27%  Similarity=0.503  Sum_probs=28.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      +.+|+|+|+|++|..++..+-..|. ++++++..
T Consensus        11 ~~~VlVvG~GGvGs~va~~Lar~GVg~i~LvD~D   44 (231)
T cd00755          11 NAHVAVVGLGGVGSWAAEALARSGVGKLTLIDFD   44 (231)
T ss_pred             CCCEEEECCCHHHHHHHHHHHHcCCCEEEEECCC
Confidence            3679999999999999999988998 88888855

coli hypothetical protein ygdL. The common reaction mechanism catalyzed by E1-like enzymes begins with a nucleophilic attack of the C-terminal carboxylate of the ubiquitin-like substrate, on the alpha-phosphate of an ATP molecule bound at the active site of the activating enzymes, leading to the formation of a high-energy acyladenylate intermediate and subsequently to the formation of a thiocarboxylate at the C termini of the substrate. The exact function of this family is unknown.

>PRK14185 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.08  E-value=0.25  Score=44.12  Aligned_cols=95  Identities=17%  Similarity=0.139  Sum_probs=71.0

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      .+||+.......|.....--.|.+|+|+|. ..+|.=+..++...    ++.|++..+....+.                
T Consensus       136 ~~PcTp~av~~lL~~~~i~l~GK~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~nl~----------------  199 (293)
T PRK14185        136 FVSATPNGILELLKRYHIETSGKKCVVLGRSNIVGKPMAQLMMQKAYPGDCTVTVCHSRSKNLK----------------  199 (293)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHcCCCCCCCEEEEecCCCCCHH----------------
Confidence            467776666666666555468999999997 79999988888876    688888765543322                


Q ss_pred             HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                           +..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       200 -----~~~~~ADIvIsAvGkp~~i~--~~~vk~gavVIDvGin  235 (293)
T PRK14185        200 -----KECLEADIIIAALGQPEFVK--ADMVKEGAVVIDVGTT  235 (293)
T ss_pred             -----HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEecCc
Confidence                 22345899999999887443  4789999999999875

>TIGR00446 nop2p NOL1/NOP2/sun family putative RNA methylase

Probab=95.07  E-value=0.44  Score=42.17  Aligned_cols=99  Identities=17%  Similarity=0.158  Sum_probs=60.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHH---hCCCcEE-EeCCCHHHHHHhcCCccEEE-E
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALS---LLGADKF-VVSSDLEQMKALGKSLDFII-D  250 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~---~~g~~~~-v~~~~~~~~~~~~~~~dvvi-d  250 (344)
                      +++|++||-.|+|+ |..++.+++.++  .+|++++.++++++.+.+   ..|...+ +...+........+.+|.|+ |
T Consensus        69 ~~~g~~VLDl~ag~-G~kt~~la~~~~~~g~v~a~D~~~~~l~~~~~n~~~~g~~~v~~~~~D~~~~~~~~~~fD~Vl~D  147 (264)
T TIGR00446        69 PDPPERVLDMAAAP-GGKTTQISALMKNEGAIVANEFSKSRTKVLIANINRCGVLNVAVTNFDGRVFGAAVPKFDAILLD  147 (264)
T ss_pred             CCCcCEEEEECCCc-hHHHHHHHHHcCCCCEEEEEcCCHHHHHHHHHHHHHcCCCcEEEecCCHHHhhhhccCCCEEEEc
Confidence            37899999888754 444555565553  389999999998765533   3454321 22223222222234699986 4


Q ss_pred             --CCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          251 --TASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 --~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        |+|..                         ..+..+++.++++|+++....+
T Consensus       148 ~Pcsg~G~~~~~p~~~~~~~~~~~~~l~~~q~~iL~~a~~~lkpgG~lvYstcs  201 (264)
T TIGR00446       148 APCSGEGVIRKDPSRKKNWSEEDIQEISALQKELIDSAFDALKPGGVLVYSTCS  201 (264)
T ss_pred             CCCCCCcccccChhhhhcCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEeCC
Confidence              33321                         1466788899999999866443

>TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase

Probab=95.07  E-value=0.12  Score=47.74  Aligned_cols=75  Identities=19%  Similarity=0.180  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC----Cc-EEEeCCCHHHHHHhc--CCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----AD-KFVVSSDLEQMKALG--KSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~-~~v~~~~~~~~~~~~--~~~dvvid~  251 (344)
                      .|.++||+|+ |.+|..+++.+...|.+|++++++........+.++    .. ...|-.+.+.+.+..  .++|+||.+
T Consensus         3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~d~vih~   82 (349)
T TIGR02622         3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDAAKLRKAIAEFKPEIVFHL   82 (349)
T ss_pred             CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCHHHHHHHHhhcCCCEEEEC
Confidence            3678999997 999999999999999999999877664332212222    11 122444555554443  257999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .+.
T Consensus        83 A~~   85 (349)
T TIGR02622        83 AAQ   85 (349)
T ss_pred             Ccc
Confidence            873

Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose.

>TIGR02355 moeB molybdopterin synthase sulfurylase MoeB

Probab=95.06  E-value=0.15  Score=44.37  Aligned_cols=82  Identities=26%  Similarity=0.368  Sum_probs=50.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhH-------------------HHH---HHhCCCcEEEeC----C
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKK-------------------EEA---LSLLGADKFVVS----S  233 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~-------------------~~~---~~~~g~~~~v~~----~  233 (344)
                      +.+|+|+|+|++|..+++.+...|. +++++|...-+.                   +.+   .+++..+.-+..    -
T Consensus        24 ~~~VlvvG~GglGs~va~~La~~Gvg~i~lvD~D~ve~sNL~RQ~l~~~~diG~~Ka~~a~~~l~~inp~v~i~~~~~~i  103 (240)
T TIGR02355        24 ASRVLIVGLGGLGCAASQYLAAAGVGNLTLLDFDTVSLSNLQRQVLHSDANIGQPKVESAKDALTQINPHIAINPINAKL  103 (240)
T ss_pred             CCcEEEECcCHHHHHHHHHHHHcCCCEEEEEeCCcccccCcccceeeeHhhCCCcHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4789999999999999999999998 888877553221                   111   112221111111    1


Q ss_pred             CHHHHHHhcCCccEEEECCCCchhHHHHHH
Q 019199          234 DLEQMKALGKSLDFIIDTASGDHPFDAYMS  263 (344)
Q Consensus       234 ~~~~~~~~~~~~dvvid~~g~~~~~~~~~~  263 (344)
                      +.+...+.-.++|+|+|+..+.. .+..+.
T Consensus       104 ~~~~~~~~~~~~DlVvd~~D~~~-~r~~ln  132 (240)
T TIGR02355       104 DDAELAALIAEHDIVVDCTDNVE-VRNQLN  132 (240)
T ss_pred             CHHHHHHHhhcCCEEEEcCCCHH-HHHHHH
Confidence            12233444468999999999877 444443

This model describes the molybdopterin biosynthesis protein MoeB in E. coli and related species. The enzyme covalently modifies the molybdopterin synthase MoaD by sulfurylation. This enzyme is closely related to ThiF, a thiamine biosynthesis enzyme that modifies ThiS by an analogous adenylation. Both MoeB and ThiF belong to the HesA/MoeB/ThiF family (pfam00899).

>PRK12744 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.46  Score=41.58  Aligned_cols=75  Identities=20%  Similarity=0.198  Sum_probs=47.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----SKKEEAL---SLLGADK---FVVSSDLEQMKAL-------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------  241 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.    +..+.+.   +..+...   .+|..+.+.+.+.       
T Consensus         7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~   86 (257)
T PRK12744          7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA   86 (257)
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence            4678999997 9999999999988999977665432    2222221   2234321   2344555443322       


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                      .+++|++|.+.|.
T Consensus        87 ~~~id~li~~ag~   99 (257)
T PRK12744         87 FGRPDIAINTVGK   99 (257)
T ss_pred             hCCCCEEEECCcc
Confidence            2578999998874

>PRK05650 short chain dehydrogenase; Provisional

Probab=95.05  E-value=0.12  Score=45.69  Aligned_cols=72  Identities=25%  Similarity=0.299  Sum_probs=49.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      ++||+|+ |++|...+..+...|++|++++++.++.+.+.++   .+.+.   ..|..+.+.+.+.       .+++|++
T Consensus         2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l   81 (270)
T PRK05650          2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI   81 (270)
T ss_pred             EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899988 9999999988888999999999888765544222   23222   2233444333221       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |.+.|.
T Consensus        82 I~~ag~   87 (270)
T PRK05650         82 VNNAGV   87 (270)
T ss_pred             EECCCC
Confidence            998874

>PRK06141 ornithine cyclodeaminase; Validated

Probab=95.04  E-value=0.33  Score=44.15  Aligned_cols=93  Identities=26%  Similarity=0.238  Sum_probs=61.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HCCC-eEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGK-AFGL-NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~-~~g~-~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ....+++|+|+|..|.+.+..+. ..+. +|++..++.++.+.+.+++   |... ....+.   .+...++|+|+.+++
T Consensus       123 ~~~~~v~iiG~G~~a~~~~~al~~~~~~~~V~V~~Rs~~~a~~~a~~~~~~g~~~-~~~~~~---~~av~~aDIVi~aT~  198 (314)
T PRK06141        123 KDASRLLVVGTGRLASLLALAHASVRPIKQVRVWGRDPAKAEALAAELRAQGFDA-EVVTDL---EAAVRQADIISCATL  198 (314)
T ss_pred             CCCceEEEECCcHHHHHHHHHHHhcCCCCEEEEEcCCHHHHHHHHHHHHhcCCce-EEeCCH---HHHHhcCCEEEEeeC
Confidence            56788999999999998876444 3565 8999999988877765555   3221 112222   222357999998887


Q ss_pred             Cchh-HHHHHHhcccCCEEEEEcCC
Q 019199          254 GDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .... +.  -+.++++-.+..+|..
T Consensus       199 s~~pvl~--~~~l~~g~~i~~ig~~  221 (314)
T PRK06141        199 STEPLVR--GEWLKPGTHLDLVGNF  221 (314)
T ss_pred             CCCCEec--HHHcCCCCEEEeeCCC
Confidence            6532 22  2567888877777754

>PRK12769 putative oxidoreductase Fe-S binding subunit; Reviewed

Probab=95.04  E-value=0.08  Score=53.34  Aligned_cols=76  Identities=18%  Similarity=0.223  Sum_probs=52.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHHhCCCcEEEeCCC-HH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS---------------------KKEEALSLLGADKFVVSSD-LE  236 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~---------------------~~~~~~~~~g~~~~v~~~~-~~  236 (344)
                      ..+.+|+|+|+|..|++++..+...|.+|+++++.+.                     +.+.+ +++|.+...+..- .+
T Consensus       325 ~~~~~VaIIGaGpAGLsaA~~L~~~G~~V~V~E~~~~~GG~l~~gip~~~l~~~~~~~~~~~~-~~~Gv~~~~~~~v~~~  403 (654)
T PRK12769        325 KSDKRVAIIGAGPAGLACADVLARNGVAVTVYDRHPEIGGLLTFGIPAFKLDKSLLARRREIF-SAMGIEFELNCEVGKD  403 (654)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEecCCCCCceeeecCCCccCCHHHHHHHHHHH-HHCCeEEECCCEeCCc
Confidence            3588999999999999999999999999999987542                     23344 5677554332210 00


Q ss_pred             -HHHHhcCCccEEEECCCCc
Q 019199          237 -QMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       237 -~~~~~~~~~dvvid~~g~~  255 (344)
                       .+.....++|.+|.++|..
T Consensus       404 i~~~~~~~~~DavilAtGa~  423 (654)
T PRK12769        404 ISLESLLEDYDAVFVGVGTY  423 (654)
T ss_pred             CCHHHHHhcCCEEEEeCCCC
Confidence             1122224699999988853

>PRK14182 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=95.03  E-value=0.27  Score=43.64  Aligned_cols=95  Identities=17%  Similarity=0.168  Sum_probs=70.9

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+.....--.|.+++|+|- ..+|.-+..++...+++|++..+....+.                    
T Consensus       136 ~~PcTp~avi~ll~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~AtVtichs~T~nl~--------------------  195 (282)
T PRK14182        136 PRPCTPAGVMRMLDEARVDPKGKRALVVGRSNIVGKPMAMMLLERHATVTIAHSRTADLA--------------------  195 (282)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHHHCCCEEEEeCCCCCCHH--------------------
Confidence            367766666666665554468999999997 79999999999999999998765543322                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+.  -+.++++..++++|..
T Consensus       196 -~~~~~ADIvI~AvGk~~~i~--~~~ik~gaiVIDvGin  231 (282)
T PRK14182        196 -GEVGRADILVAAIGKAELVK--GAWVKEGAVVIDVGMN  231 (282)
T ss_pred             -HHHhhCCEEEEecCCcCccC--HHHcCCCCEEEEeece
Confidence             22355899999999876332  4678999999999865

>COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis]

Probab=95.02  E-value=0.33  Score=42.09  Aligned_cols=101  Identities=20%  Similarity=0.200  Sum_probs=68.5

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHh-cCCccEEE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKAL-GKSLDFII  249 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~-~~~~dvvi  249 (344)
                      ..+.+|++|+=.|.|+ |.++.-+|+..|.  +|+.....++..+.|++.+   |....+.....+..+.. ...+|.+|
T Consensus        90 ~gi~pg~rVlEAGtGS-G~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~Dv~~~~~~~~vDav~  168 (256)
T COG2519          90 LGISPGSRVLEAGTGS-GALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLGDVREGIDEEDVDAVF  168 (256)
T ss_pred             cCCCCCCEEEEcccCc-hHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEeccccccccccccCEEE
Confidence            3449999999988753 7788888888775  8999999988776665443   43221222111111111 24788875


Q ss_pred             -ECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          250 -DTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       250 -d~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       |...-...++.+.+.|+|+|+++.+..+
T Consensus       169 LDmp~PW~~le~~~~~Lkpgg~~~~y~P~  197 (256)
T COG2519         169 LDLPDPWNVLEHVSDALKPGGVVVVYSPT  197 (256)
T ss_pred             EcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence             6555556689999999999999998543

>PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases

Probab=95.02  E-value=0.091  Score=46.85  Aligned_cols=71  Identities=18%  Similarity=0.195  Sum_probs=49.2

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC----C---c-E----EEeCCCHHHHHHhcC--CccE
Q 019199          184 LGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG----A---D-K----FVVSSDLEQMKALGK--SLDF  247 (344)
Q Consensus       184 vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g----~---~-~----~v~~~~~~~~~~~~~--~~dv  247 (344)
                      |||+|+ |++|...++.+...+. +++++++++..+..+.+++.    .   . .    +-|.++.+.+.++-.  ++|+
T Consensus         1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDvrd~~~l~~~~~~~~pdi   80 (293)
T PF02719_consen    1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDVRDKERLNRIFEEYKPDI   80 (293)
T ss_dssp             EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSCCHHHHHHHHTT--T-SE
T ss_pred             CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecccCHHHHHHHHhhcCCCE
Confidence            789987 9999999988888887 89999999999888877772    1   1 1    114456666666654  8999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ||.++.-
T Consensus        81 VfHaAA~   87 (293)
T PF02719_consen   81 VFHAAAL   87 (293)
T ss_dssp             EEE----
T ss_pred             EEEChhc
Confidence            9998864

The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A.

>PLN02730 enoyl-[acyl-carrier-protein] reductase

Probab=94.97  E-value=0.3  Score=44.22  Aligned_cols=38  Identities=26%  Similarity=0.247  Sum_probs=31.1

Q ss_pred             CCCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCchhH
Q 019199          179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTSKK  217 (344)
Q Consensus       179 ~~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~~~  217 (344)
                      -.|.++||+|+   .++|.+.++.+...|++|++ .+..+++
T Consensus         7 l~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l   47 (303)
T PLN02730          7 LRGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL   47 (303)
T ss_pred             CCCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence            35789999988   79999999999999999988 5554443

>COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion]

Probab=94.97  E-value=0.08  Score=46.90  Aligned_cols=102  Identities=25%  Similarity=0.194  Sum_probs=72.9

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-----------HHHH-----
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-----------LEQM-----  238 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-----------~~~~-----  238 (344)
                      ++...++.++++.|.|..|+.++..++..|+-|+..+....+.+.- +.+|+...-..+.           .++.     
T Consensus       158 Aagtv~pA~vlv~G~Gvagl~aiata~~lG~iVt~rdlrm~~Keqv-~s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~  236 (356)
T COG3288         158 AAGTVSPAKVLVIGAGVAGLAAIATAVRLGAIVTARDLRMFKKEQV-ESLGAKFLAVEDEESAGGYAKEMSEEFIAKQAE  236 (356)
T ss_pred             hcccccchhhhhhhHHHHHHHHHHHHhhcceEEehhhhhhHHhhhh-hhcccccccccccccCCCccccCCHHHHHHHHH
Confidence            3334677889999999999999999999999999988888877766 5777543211111           1111     


Q ss_pred             --HHhcCCccEEEECCCCc------hhHHHHHHhcccCCEEEEEcCC
Q 019199          239 --KALGKSLDFIIDTASGD------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 --~~~~~~~dvvid~~g~~------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        .+...++|+||-+.--|      .....+...++|+..+|++...
T Consensus       237 ~~a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~  283 (356)
T COG3288         237 LVAEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAE  283 (356)
T ss_pred             HHHHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhh
Confidence              12247899999876322      1256788899999999988643

>PRK07578 short chain dehydrogenase; Provisional

Probab=94.97  E-value=0.57  Score=39.19  Aligned_cols=60  Identities=25%  Similarity=0.257  Sum_probs=40.5

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCccEEEECCCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLDFIIDTASG  254 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~dvvid~~g~  254 (344)
                      ++||+|+ |++|.+.+..+... .+|++++++.+           ....|-.+.+.+++.   .+++|+++.+.|.
T Consensus         2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~id~lv~~ag~   65 (199)
T PRK07578          2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSG-----------DVQVDITDPASIRALFEKVGKVDAVVSAAGK   65 (199)
T ss_pred             eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCC-----------ceEecCCChHHHHHHHHhcCCCCEEEECCCC
Confidence            5889987 99999888777666 89999887653           112344444443332   2468888887774

>KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.96  E-value=0.16  Score=46.10  Aligned_cols=99  Identities=22%  Similarity=0.207  Sum_probs=67.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC----Cc----EEEeCCCHHHHHHh-------c
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----AD----KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g----~~----~~v~~~~~~~~~~~-------~  242 (344)
                      -.|.+++|+|+ +++|..++..+...|++|+..+++.++.+.+.++..    ..    ..+|-.+...+++.       .
T Consensus        33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~~  112 (314)
T KOG1208|consen   33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKKE  112 (314)
T ss_pred             CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhcC
Confidence            45678889998 999999999999999999999999987766654443    12    23344555444332       3


Q ss_pred             CCccEEEECCCCc-----------------------hhHHHHHHhcccC--CEEEEEcCC
Q 019199          243 KSLDFIIDTASGD-----------------------HPFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       243 ~~~dvvid~~g~~-----------------------~~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                      ...|+.+++.|--                       ...+.++..|+..  +|||.++..
T Consensus       113 ~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~  172 (314)
T KOG1208|consen  113 GPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSI  172 (314)
T ss_pred             CCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCc
Confidence            5788888877631                       1234455555544  799988753

>PRK06114 short chain dehydrogenase; Provisional

Probab=94.94  E-value=0.21  Score=43.74  Aligned_cols=75  Identities=17%  Similarity=0.152  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH---HhCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEAL---SLLGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~---~~~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ +++|.++++.+...|++|++++++++ ..+.+.   +..+..   ...|-.+++.+.+.       .++
T Consensus         7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~   86 (254)
T PRK06114          7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA   86 (254)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999987 99999999999989999999988654 222221   223422   12244444433321       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        87 id~li~~ag~   96 (254)
T PRK06114         87 LTLAVNAAGI   96 (254)
T ss_pred             CCEEEECCCC
Confidence            8999998874

>COG0421 SpeE Spermidine synthase [Amino acid transport and metabolism]

Probab=94.92  E-value=0.35  Score=43.09  Aligned_cols=92  Identities=21%  Similarity=0.314  Sum_probs=63.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc---------EEEeCCCHHHHHHhcCCccEEE-E
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD---------KFVVSSDLEQMKALGKSLDFII-D  250 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~---------~~v~~~~~~~~~~~~~~~dvvi-d  250 (344)
                      .+|||+|.| -|-.+-.+++.... ++++++-+++=.+.+++.++..         .++..+....+++...++|++| |
T Consensus        78 k~VLiiGgG-dG~tlRevlkh~~ve~i~~VEID~~Vi~~ar~~l~~~~~~~~dpRv~i~i~Dg~~~v~~~~~~fDvIi~D  156 (282)
T COG0421          78 KRVLIIGGG-DGGTLREVLKHLPVERITMVEIDPAVIELARKYLPEPSGGADDPRVEIIIDDGVEFLRDCEEKFDVIIVD  156 (282)
T ss_pred             CeEEEECCC-ccHHHHHHHhcCCcceEEEEEcCHHHHHHHHHhccCcccccCCCceEEEeccHHHHHHhCCCcCCEEEEc
Confidence            589999854 35556677777766 8999998888888887667632         1222222345555556899986 4


Q ss_pred             CCCC---------chhHHHHHHhcccCCEEEEE
Q 019199          251 TASG---------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~---------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +...         ..-++..-++|+++|.++.-
T Consensus       157 ~tdp~gp~~~Lft~eFy~~~~~~L~~~Gi~v~q  189 (282)
T COG0421         157 STDPVGPAEALFTEEFYEGCRRALKEDGIFVAQ  189 (282)
T ss_pred             CCCCCCcccccCCHHHHHHHHHhcCCCcEEEEe
Confidence            4432         34477888999999999866

>PRK07417 arogenate dehydrogenase; Reviewed

Probab=94.91  E-value=0.22  Score=44.53  Aligned_cols=88  Identities=24%  Similarity=0.197  Sum_probs=57.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh---HH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP---FD  259 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~---~~  259 (344)
                      +|.|+|.|.+|...+..++..|.+|++.+++++..+.+ .+.|...... .+.+    ...++|+||.++.....   +.
T Consensus         2 ~I~IIG~G~mG~sla~~L~~~g~~V~~~d~~~~~~~~a-~~~g~~~~~~-~~~~----~~~~aDlVilavp~~~~~~~~~   75 (279)
T PRK07417          2 KIGIVGLGLIGGSLGLDLRSLGHTVYGVSRRESTCERA-IERGLVDEAS-TDLS----LLKDCDLVILALPIGLLLPPSE   75 (279)
T ss_pred             eEEEEeecHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCccccc-CCHh----HhcCCCEEEEcCCHHHHHHHHH
Confidence            57889999999998888888899999999998888777 4556321111 1111    12568999988875441   22


Q ss_pred             HHHHhcccCCEEEEEcC
Q 019199          260 AYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       260 ~~~~~l~~~G~iv~~g~  276 (344)
                      .+...++++..+++++.
T Consensus        76 ~l~~~l~~~~ii~d~~S   92 (279)
T PRK07417         76 QLIPALPPEAIVTDVGS   92 (279)
T ss_pred             HHHHhCCCCcEEEeCcc
Confidence            33334455555555543

>PRK14167 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.91  E-value=0.27  Score=43.98  Aligned_cols=95  Identities=18%  Similarity=0.176  Sum_probs=70.0

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      ..||+.......|.....--.|.+|+|+|. ..+|.=+.+++...    ++.|++..+....+.                
T Consensus       136 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~aTVtvchs~T~~l~----------------  199 (297)
T PRK14167        136 FKPCTPHGIQKLLAAAGVDTEGADVVVVGRSDIVGKPMANLLIQKADGGNATVTVCHSRTDDLA----------------  199 (297)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCcccHHHHHHHHhcCccCCCCEEEEeCCCCCCHH----------------
Confidence            457766666666665554468999999997 79999988888766    788888765443222                


Q ss_pred             HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                           +..+.+|+++-++|.+..+.  -++++++..++++|..
T Consensus       200 -----~~~~~ADIvIsAvGkp~~i~--~~~ik~gaiVIDvGin  235 (297)
T PRK14167        200 -----AKTRRADIVVAAAGVPELID--GSMLSEGATVIDVGIN  235 (297)
T ss_pred             -----HHHhhCCEEEEccCCcCccC--HHHcCCCCEEEEcccc
Confidence                 22356999999999887333  3789999999999965

>PRK09310 aroDE bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase protein; Reviewed

Probab=94.90  E-value=0.27  Score=47.50  Aligned_cols=81  Identities=11%  Similarity=0.170  Sum_probs=55.4

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ++.+...--.+.+++|+|+|++|.+++..+...|++|++..++.++.+.+.+.++.. .++..+   ... ..++|++++
T Consensus       322 ~l~~~~~~~~~k~vlIiGaGgiG~aia~~L~~~G~~V~i~~R~~~~~~~la~~~~~~-~~~~~~---~~~-l~~~DiVIn  396 (477)
T PRK09310        322 LLKQKNIPLNNQHVAIVGAGGAAKAIATTLARAGAELLIFNRTKAHAEALASRCQGK-AFPLES---LPE-LHRIDIIIN  396 (477)
T ss_pred             HHHhcCCCcCCCEEEEEcCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccc-eechhH---hcc-cCCCCEEEE
Confidence            444333223577899999999999999999999999999998888776665555432 122111   111 246999999


Q ss_pred             CCCCch
Q 019199          251 TASGDH  256 (344)
Q Consensus       251 ~~g~~~  256 (344)
                      |+....
T Consensus       397 atP~g~  402 (477)
T PRK09310        397 CLPPSV  402 (477)
T ss_pred             cCCCCC
Confidence            987543

>PLN02897 tetrahydrofolate dehydrogenase/cyclohydrolase, putative

Probab=94.90  E-value=0.23  Score=45.24  Aligned_cols=95  Identities=21%  Similarity=0.200  Sum_probs=71.9

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......|.....--.|.+++|+|- ..+|.=+..++...++.|++..+....+.                    
T Consensus       193 ~~PCTp~avi~LL~~~~i~l~GK~vvVIGRS~iVGkPla~LL~~~~ATVTicHs~T~nl~--------------------  252 (345)
T PLN02897        193 FVSCTPKGCVELLIRSGVEIAGKNAVVIGRSNIVGLPMSLLLQRHDATVSTVHAFTKDPE--------------------  252 (345)
T ss_pred             CcCCCHHHHHHHHHHhCCCCCCCEEEEECCCccccHHHHHHHHHCCCEEEEEcCCCCCHH--------------------
Confidence            467766666666665554467999999996 79999999999999999988875543222                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|+++-++|.+..+  --++++++..+|++|..
T Consensus       253 -~~~~~ADIvIsAvGkp~~v--~~d~vk~GavVIDVGin  288 (345)
T PLN02897        253 -QITRKADIVIAAAGIPNLV--RGSWLKPGAVVIDVGTT  288 (345)
T ss_pred             -HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEcccc
Confidence             2335699999999988732  35789999999999866

>PRK08226 short chain dehydrogenase; Provisional

Probab=94.88  E-value=0.21  Score=43.83  Aligned_cols=75  Identities=20%  Similarity=0.219  Sum_probs=49.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD---KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~---~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.+++|+|+ |++|.+.+..+...|++|++++++++..+.+.  +..+..   ...|..+.+.+.+.       .+.+|
T Consensus         5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id   84 (263)
T PRK08226          5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID   84 (263)
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999987 99999999999889999999988765322221  122322   12344444433322       25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|.+.|.
T Consensus        85 ~vi~~ag~   92 (263)
T PRK08226         85 ILVNNAGV   92 (263)
T ss_pred             EEEECCCc
Confidence            99998873

>PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional

Probab=94.87  E-value=0.18  Score=43.84  Aligned_cols=42  Identities=24%  Similarity=0.274  Sum_probs=35.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA  220 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~  220 (344)
                      .++.++||+|+ |.+|...++.+...|++|++++++.++.+.+
T Consensus        10 ~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~   52 (247)
T PRK08945         10 LKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAV   52 (247)
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHH
Confidence            57889999988 9999999988888899999999987765443

>PLN02520 bifunctional 3-dehydroquinate dehydratase/shikimate dehydrogenase

Probab=94.87  E-value=0.14  Score=50.04  Aligned_cols=71  Identities=25%  Similarity=0.309  Sum_probs=51.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .+.+++|+|+|++|.+++..+...|++|+++.++.++.+.+.+.++.. .+...+..  .......|+++++++
T Consensus       378 ~~k~vlIlGaGGagrAia~~L~~~G~~V~i~nR~~e~a~~la~~l~~~-~~~~~~~~--~~~~~~~diiINtT~  448 (529)
T PLN02520        378 AGKLFVVIGAGGAGKALAYGAKEKGARVVIANRTYERAKELADAVGGQ-ALTLADLE--NFHPEEGMILANTTS  448 (529)
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCc-eeeHhHhh--hhccccCeEEEeccc
Confidence            467899999999999999999999999999999888877776666532 22222111  111235789998775

>TIGR02964 xanthine_xdhC xanthine dehydrogenase accessory protein XdhC

Probab=94.86  E-value=0.2  Score=43.88  Aligned_cols=37  Identities=19%  Similarity=0.294  Sum_probs=34.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .|-.+++|.|+|.++++++++|+.+|.+|++++.+++
T Consensus        98 ~p~~~L~IfGaG~va~~la~la~~lGf~V~v~D~R~~  134 (246)
T TIGR02964        98 PPAPHVVLFGAGHVGRALVRALAPLPCRVTWVDSREA  134 (246)
T ss_pred             CCCCEEEEECCcHHHHHHHHHHhcCCCEEEEEeCCcc
Confidence            5678899999999999999999999999999998766

Members of this protein family are the accessory protein XdhC for insertion of the molybdenum cofactor into the xanthine dehydrogenase large chain, XdhB, in bacteria. This protein is not part of the mature xanthine dehydrogenase. Xanthine dehydrogenase is an enzyme for purine catabolism, from other purines to xanthine to urate to further breakdown products.

>PRK08063 enoyl-(acyl carrier protein) reductase; Provisional

Probab=94.86  E-value=0.16  Score=44.15  Aligned_cols=75  Identities=25%  Similarity=0.308  Sum_probs=48.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      ++.++||+|+ |++|...+..+...|++|++. .++.++.+.+.   +..+...   ..|..+++.+.+.       .++
T Consensus         3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   82 (250)
T PRK08063          3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR   82 (250)
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4578999998 999999999999999988764 55555543332   2234322   1344454443322       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|.+.|.
T Consensus        83 id~vi~~ag~   92 (250)
T PRK08063         83 LDVFVNNAAS   92 (250)
T ss_pred             CCEEEECCCC
Confidence            8999998873

>PRK14181 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.86  E-value=0.33  Score=43.24  Aligned_cols=95  Identities=16%  Similarity=0.171  Sum_probs=70.1

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC----CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF----GLNVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~----g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      .+||+....+..|.....--.|.+|+|+|- ..+|.=+..++...    ++.|++..+....+.                
T Consensus       132 ~~PcTp~avi~lL~~~~i~l~Gk~vvViGrS~iVGkPla~lL~~~~~~~~AtVtvchs~T~~l~----------------  195 (287)
T PRK14181        132 FIPCTPAGIIELLKYYEIPLHGRHVAIVGRSNIVGKPLAALLMQKHPDTNATVTLLHSQSENLT----------------  195 (287)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCccchHHHHHHHHhCcCCCCCEEEEeCCCCCCHH----------------
Confidence            467766666666666554467999999997 79999999999887    788887664433222                


Q ss_pred             HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                           +..+.+|+++-++|.+..+  --+.++++..++++|..
T Consensus       196 -----~~~~~ADIvV~AvG~p~~i--~~~~ik~GavVIDvGin  231 (287)
T PRK14181        196 -----EILKTADIIIAAIGVPLFI--KEEMIAEKAVIVDVGTS  231 (287)
T ss_pred             -----HHHhhCCEEEEccCCcCcc--CHHHcCCCCEEEEeccc
Confidence                 2235589999999988633  25688999999999865

>PRK01438 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.84  E-value=0.27  Score=47.60  Aligned_cols=71  Identities=23%  Similarity=0.232  Sum_probs=49.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchh-----HHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK-----KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~-----~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ..+.+|+|+|+|.+|+.++.+++..|.+|++++..+..     .+.+ ++.|........ ..    ...++|+|+-+.|
T Consensus        14 ~~~~~v~viG~G~~G~~~A~~L~~~G~~V~~~d~~~~~~~~~~~~~l-~~~gv~~~~~~~-~~----~~~~~D~Vv~s~G   87 (480)
T PRK01438         14 WQGLRVVVAGLGVSGFAAADALLELGARVTVVDDGDDERHRALAAIL-EALGATVRLGPG-PT----LPEDTDLVVTSPG   87 (480)
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchhhhHHHHHHH-HHcCCEEEECCC-cc----ccCCCCEEEECCC
Confidence            35678999999999999999999999999999866531     1223 456755433222 11    2245888888877


Q ss_pred             Cc
Q 019199          254 GD  255 (344)
Q Consensus       254 ~~  255 (344)
                      .+
T Consensus        88 i~   89 (480)
T PRK01438         88 WR   89 (480)
T ss_pred             cC
Confidence            54

>PRK14103 trans-aconitate 2-methyltransferase; Provisional

Probab=94.84  E-value=0.42  Score=42.01  Aligned_cols=92  Identities=15%  Similarity=0.226  Sum_probs=62.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC---
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS---  253 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g---  253 (344)
                      ..++++||-+|+|. |..+..+++.. +.+|+.++.+++..+.++ +.+.+.+ .. +...+. ..+.+|+|+....   
T Consensus        27 ~~~~~~vLDlGcG~-G~~~~~l~~~~p~~~v~gvD~s~~~~~~a~-~~~~~~~-~~-d~~~~~-~~~~fD~v~~~~~l~~  101 (255)
T PRK14103         27 AERARRVVDLGCGP-GNLTRYLARRWPGAVIEALDSSPEMVAAAR-ERGVDAR-TG-DVRDWK-PKPDTDVVVSNAALQW  101 (255)
T ss_pred             CCCCCEEEEEcCCC-CHHHHHHHHHCCCCEEEEEECCHHHHHHHH-hcCCcEE-Ec-ChhhCC-CCCCceEEEEehhhhh
Confidence            37889999999864 66777777765 679999999998888773 4454322 22 211111 1357999986443   


Q ss_pred             --C-chhHHHHHHhcccCCEEEEE
Q 019199          254 --G-DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       254 --~-~~~~~~~~~~l~~~G~iv~~  274 (344)
                        . ...+..+.+.|+|+|+++..
T Consensus       102 ~~d~~~~l~~~~~~LkpgG~l~~~  125 (255)
T PRK14103        102 VPEHADLLVRWVDELAPGSWIAVQ  125 (255)
T ss_pred             CCCHHHHHHHHHHhCCCCcEEEEE
Confidence              1 23467888899999999865

>PRK08278 short chain dehydrogenase; Provisional

Probab=94.82  E-value=0.31  Score=43.22  Aligned_cols=75  Identities=21%  Similarity=0.271  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHH---HHhCCCcE---EEeCCCHHHHHHh----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-------KEEA---LSLLGADK---FVVSSDLEQMKAL----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-------~~~~---~~~~g~~~---~v~~~~~~~~~~~----  241 (344)
                      .+.++||+|+ |++|...+..+...|++|++++++.+.       ++.+   .+..+...   ..|..+.+.+.+.    
T Consensus         5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~   84 (273)
T PRK08278          5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA   84 (273)
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence            4578999998 999999999888899999999987542       2111   12334322   2355555443322    


Q ss_pred             ---cCCccEEEECCCC
Q 019199          242 ---GKSLDFIIDTASG  254 (344)
Q Consensus       242 ---~~~~dvvid~~g~  254 (344)
                         -+++|++|++.|.
T Consensus        85 ~~~~g~id~li~~ag~  100 (273)
T PRK08278         85 VERFGGIDICVNNASA  100 (273)
T ss_pred             HHHhCCCCEEEECCCC
Confidence               1579999998874

>PRK14106 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.81  E-value=0.18  Score=48.26  Aligned_cols=71  Identities=25%  Similarity=0.351  Sum_probs=49.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hH----HHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KK----EEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~----~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      .+.+|+|+|+|.+|+.++..+...|++|++++.... ..    +.+ ++.|.. ++..+..+   +..+++|+|+.+.|.
T Consensus         4 ~~k~v~iiG~g~~G~~~A~~l~~~G~~V~~~d~~~~~~~~~~~~~l-~~~~~~-~~~~~~~~---~~~~~~d~vv~~~g~   78 (450)
T PRK14106          4 KGKKVLVVGAGVSGLALAKFLKKLGAKVILTDEKEEDQLKEALEEL-GELGIE-LVLGEYPE---EFLEGVDLVVVSPGV   78 (450)
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHH-HhcCCE-EEeCCcch---hHhhcCCEEEECCCC
Confidence            468899999988999999999999999999998752 22    222 344544 22222222   223569999998885


Q ss_pred             c
Q 019199          255 D  255 (344)
Q Consensus       255 ~  255 (344)
                      .
T Consensus        79 ~   79 (450)
T PRK14106         79 P   79 (450)
T ss_pred             C
Confidence            4

>PRK14193 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional

Probab=94.78  E-value=0.33  Score=43.15  Aligned_cols=95  Identities=22%  Similarity=0.229  Sum_probs=70.0

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHH--CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKA--FGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE  236 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~--~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~  236 (344)
                      .+||+....+..+...+.--.|.+++|+|. ..+|.-+..++..  .++.|++..+....+.                  
T Consensus       137 ~~PcTp~av~~ll~~~~i~l~Gk~vvViGrS~~VGkPla~lL~~~~~~atVtvchs~T~~l~------------------  198 (284)
T PRK14193        137 PLPCTPRGIVHLLRRYDVELAGAHVVVIGRGVTVGRPIGLLLTRRSENATVTLCHTGTRDLA------------------  198 (284)
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCCcchHHHHHHHhhccCCCEEEEeCCCCCCHH------------------
Confidence            467776666666665554357999999997 8999998888877  7899988875433222                  


Q ss_pred             HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          237 QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         +..+.+|+++-++|.+..+  --+.++++..++++|..
T Consensus       199 ---~~~k~ADIvV~AvGkp~~i--~~~~ik~GavVIDvGin  234 (284)
T PRK14193        199 ---AHTRRADIIVAAAGVAHLV--TADMVKPGAAVLDVGVS  234 (284)
T ss_pred             ---HHHHhCCEEEEecCCcCcc--CHHHcCCCCEEEEcccc
Confidence               2235589999999988632  25678999999999865

>PRK00141 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional

Probab=94.78  E-value=0.24  Score=47.87  Aligned_cols=73  Identities=14%  Similarity=0.249  Sum_probs=49.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      -.+.+|+|+|.|+.|.+++.+++..|++|++.++...+...+.+++|.......+..+.+    .++|+|+-+.|-+
T Consensus        13 ~~~~~v~v~G~G~sG~a~a~~L~~~G~~V~~~D~~~~~~~~~l~~~gi~~~~~~~~~~~~----~~~d~vV~Spgi~   85 (473)
T PRK00141         13 ELSGRVLVAGAGVSGRGIAAMLSELGCDVVVADDNETARHKLIEVTGVADISTAEASDQL----DSFSLVVTSPGWR   85 (473)
T ss_pred             ccCCeEEEEccCHHHHHHHHHHHHCCCEEEEECCChHHHHHHHHhcCcEEEeCCCchhHh----cCCCEEEeCCCCC
Confidence            456789999999999999999999999999999765544333345665433222223222    3577777766643

>TIGR02415 23BDH acetoin reductases

Probab=94.76  E-value=0.18  Score=43.97  Aligned_cols=72  Identities=19%  Similarity=0.154  Sum_probs=49.6

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      +++|+|+ |++|...++.+...|++|+.+.+++++.+.+.+   ..+...   ..|-.+++.+.+.       .+.+|++
T Consensus         2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v   81 (254)
T TIGR02415         2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM   81 (254)
T ss_pred             EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            6899987 999999999998899999999988765544322   234221   2344555443332       2568999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |.+.|.
T Consensus        82 i~~ag~   87 (254)
T TIGR02415        82 VNNAGV   87 (254)
T ss_pred             EECCCc
Confidence            998874

One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733).

>KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism]

Probab=94.76  E-value=0.13  Score=41.64  Aligned_cols=76  Identities=25%  Similarity=0.261  Sum_probs=56.1

Q ss_pred             CCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH----HHHHh------cCCccEE
Q 019199          180 PGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE----QMKAL------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~----~~~~~------~~~~dvv  248 (344)
                      +|-.-||.| ++++|.++...+...|+.|+..+....+-+...+++|...++.+.+..    ....+      -+..|+.
T Consensus         8 kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~~   87 (260)
T KOG1199|consen    8 KGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDAL   87 (260)
T ss_pred             cCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceeee
Confidence            445557775 599999999999999999999998888766666899988777665432    11111      1568999


Q ss_pred             EECCCCc
Q 019199          249 IDTASGD  255 (344)
Q Consensus       249 id~~g~~  255 (344)
                      ++|.|..
T Consensus        88 vncagia   94 (260)
T KOG1199|consen   88 VNCAGIA   94 (260)
T ss_pred             eecccee
Confidence            9998854

>PRK05599 hypothetical protein; Provisional

Probab=94.76  E-value=0.16  Score=44.37  Aligned_cols=71  Identities=14%  Similarity=0.123  Sum_probs=48.1

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc----EEEeCCCHHHHHH-------hcCCccE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD----KFVVSSDLEQMKA-------LGKSLDF  247 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~----~~v~~~~~~~~~~-------~~~~~dv  247 (344)
                      +++|+|+ +++|.+.+..+. .|++|+++++++++.+.+.++   .|.+    ..+|-.+.+.+.+       ..+++|+
T Consensus         2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id~   80 (246)
T PRK05599          2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELAGEISL   80 (246)
T ss_pred             eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhcCCCCE
Confidence            5889987 899999887766 499999999988877655333   2322    1234455443332       1367999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        81 lv~nag~   87 (246)
T PRK05599         81 AVVAFGI   87 (246)
T ss_pred             EEEecCc
Confidence            9988874

>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A

Probab=94.76  E-value=0.13  Score=40.52  Aligned_cols=83  Identities=17%  Similarity=0.269  Sum_probs=45.0

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc-CCccEEEECCCCchhHHHHH
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG-KSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~~~  262 (344)
                      ++|.|+|.++.+.+++++.+|.+|++++..+++..      .++.+......+...... ..-++|+=+-++..-...+.
T Consensus         1 L~I~GaG~va~al~~la~~lg~~v~v~d~r~e~~~------~~~~~~~~~~~~~~~~~~~~~~t~Vv~th~h~~D~~~L~   74 (136)
T PF13478_consen    1 LVIFGAGHVARALARLAALLGFRVTVVDPRPERFP------EADEVICIPPDDILEDLEIDPNTAVVMTHDHELDAEALE   74 (136)
T ss_dssp             EEEES-STCHHHHHHHHHHCTEEEEEEES-CCC-T------TSSEEECSHHHHHHHHC-S-TT-EEE--S-CCCHHHHHH
T ss_pred             CEEEeCcHHHHHHHHHHHhCCCEEEEEcCCccccC------CCCccEecChHHHHhccCCCCCeEEEEcCCchhHHHHHH
Confidence            46789999999999999999999999999877442      344443322222223322 22334453444433244455


Q ss_pred             HhcccCCEEE
Q 019199          263 SLLKVAGVYV  272 (344)
Q Consensus       263 ~~l~~~G~iv  272 (344)
                      ..++..-+++
T Consensus        75 ~~l~~~~~Yi   84 (136)
T PF13478_consen   75 AALASPARYI   84 (136)
T ss_dssp             HHTTSS-SEE
T ss_pred             HHHcCCCCEE
Confidence            5555543333

>PRK03612 spermidine synthase; Provisional

Probab=94.75  E-value=0.34  Score=47.35  Aligned_cols=95  Identities=19%  Similarity=0.159  Sum_probs=61.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHh--CC---------C-cEEEeCCCHHHHHHhcCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSL--LG---------A-DKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~--~g---------~-~~~v~~~~~~~~~~~~~~~  245 (344)
                      .+.++||++|+| .|..+..+++.-. .+|++++-+++-.+.+++.  +.         . -.++..+..+.+.+..+++
T Consensus       296 ~~~~rVL~IG~G-~G~~~~~ll~~~~v~~v~~VEid~~vi~~ar~~~~l~~~~~~~~~dprv~vi~~Da~~~l~~~~~~f  374 (521)
T PRK03612        296 ARPRRVLVLGGG-DGLALREVLKYPDVEQVTLVDLDPAMTELARTSPALRALNGGALDDPRVTVVNDDAFNWLRKLAEKF  374 (521)
T ss_pred             CCCCeEEEEcCC-ccHHHHHHHhCCCcCeEEEEECCHHHHHHHHhCCcchhhhccccCCCceEEEEChHHHHHHhCCCCC
Confidence            456789999875 3566667777655 5999999999988887541  11         0 1222223333444445789


Q ss_pred             cEEEECCCCc-----------hhHHHHHHhcccCCEEEEE
Q 019199          246 DFIIDTASGD-----------HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       246 dvvid~~g~~-----------~~~~~~~~~l~~~G~iv~~  274 (344)
                      |+++-....+           +.++.+.+.|+|+|.++.-
T Consensus       375 DvIi~D~~~~~~~~~~~L~t~ef~~~~~~~L~pgG~lv~~  414 (521)
T PRK03612        375 DVIIVDLPDPSNPALGKLYSVEFYRLLKRRLAPDGLLVVQ  414 (521)
T ss_pred             CEEEEeCCCCCCcchhccchHHHHHHHHHhcCCCeEEEEe
Confidence            9987533321           1357888999999998864

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	344
1yqd_A	366	Sinapyl Alcohol Dehydrogenase Complexed With Nadp+		1e-84
2cf5_A	357	Crystal Structures Of The Arabidopsis Cinnamyl Alco		6e-64
1uuf_A	369	Crystal Structure Of A Zinc-Type Alcohol Dehydrogen		7e-64
3two_A	348	The Crystal Structure Of Cad From Helicobacter Pylo		5e-56
1rjw_A	339	Crystal Structure Of Nad(+)-Dependent Alcohol Dehyd		3e-37
3pii_A	339	Crystal Structure Of Mutant Of Ht- Alcohol Dehydrog		8e-37
1ps0_A	360	Crystal Structure Of The Nadp(H)-Dependent Cinnamyl		1e-36
3s1l_A	340	Crystal Structure Of Apo-Form Furx Length = 340		1e-27
1llu_A	342	The Ternary Complex Of Pseudomonas Aeruginosa Alcoh		5e-27
3meq_A	365	Crystal Structure Of Alcohol Dehydrogenase From Bru		5e-25
4eex_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		1e-24
4eez_A	348	Crystal Structure Of Lactococcus Lactis Alcohol Deh		5e-24
2hcy_A	347	Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevi		7e-23
2eer_A	347	Structural Study Of Project Id St2577 From Sulfolob		8e-20
1h2b_A	359	Crystal Structure Of The Alcohol Dehydrogenase From		5e-17
1e3j_A	352	Ketose Reductase (Sorbitol Dehydrogenase) From Silv		3e-16
2xaa_A	345	Alcohol Dehydrogenase Adh-'a' From Rhodococcus Rube		1e-15
2h6e_A	344	Crystal Structure Of The D-Arabinose Dehydrogenase		5e-15
1r37_A	347	Alcohol Dehydrogenase From Sulfolobus Solfataricus		3e-14
1nto_A	347	N249y Mutant Of Alcohol Dehydrogenase From The Arch		7e-14
3i4c_A	347	Crystal Structure Of Sulfolobus Solfataricus Adh(Ss		2e-13
3uko_A	378	Crystal Structure Of S-Nitrosoglutathione Reductase		8e-12
2dfv_A	347	Hyperthermophilic Threonine Dehydrogenase From Pyro		2e-11
2d8a_A	348	Crystal Structure Of Ph0655 From Pyrococcus Horikos		2e-11
3cos_A	381	Crystal Structure Of Human Class Ii Alcohol Dehydro		2e-11
1jvb_A	347	Alcohol Dehydrogenase From The Archaeon Sulfolobus		4e-11
1d1t_A	373	Mutant Of Human Sigma Alcohol Dehydrogenase With Le		4e-11
1agn_A	373	X-Ray Structure Of Human Sigma Alcohol Dehydrogenas		5e-11
2dq4_A	343	Crystal Structure Of Threonine 3-Dehydrogenase Leng		5e-11
4dl9_A	396	Crystal Structure Of S-nitrosoglutathione Reductase		6e-11
4a2c_A	346	Crystal Structure Of Galactitol-1-Phosphate Dehydro		1e-10
1cdo_A	374	Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Co		2e-10
1f8f_A	371	Crystal Structure Of Benzyl Alcohol Dehydrogenase F		5e-10
4ilk_A	359	Crystal Structure Of Short Chain Alcohol Dehydrogen		1e-09
3uog_A	363	Crystal Structure Of Putative Alcohol Dehydrogenase		3e-09
3gfb_A	350	L-Threonine Dehydrogenase (Tktdh) From The Hyperthe		4e-09
4ej6_A	370	Crystal Structure Of A Putative Zinc-Binding Dehydr		5e-09
1pl7_A	356	Human Sorbitol Dehydrogenase (Apo) Length = 356		6e-09
1vj0_A	380	Crystal Structure Of Alcohol Dehydrogenase (Tm0436)		1e-08
3fbg_A	346	Crystal Structure Of A Putative Arginate Lyase From		1e-08
3qj5_A	374	S-Nitrosoglutathione Reductase (Gsnor) In Complex W		2e-08
1mc5_A	374	Ternary Complex Of Human Glutathione-Dependent Form		2e-08
1teh_A	373	Structure Of Human Liver Chichi Alcohol Dehydrogena		2e-08
1pl6_A	356	Human SdhNADHINHIBITOR COMPLEX Length = 356		5e-08
3ip1_A	404	Structure Of Putative Alcohol Dehydrogenase (Tm_042		8e-08
4a27_A	349	Crystal Structure Of Human Synaptic Vesicle Membran		1e-07
1p0c_A	373	Crystal Structure Of The Nadp(H)-Dependent Vertebra		1e-07
2fzw_A	373	Structure Of The Binary Complex Of The E67l Mutant		2e-07
1e3l_A	376	P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase		3e-07
3qe3_A	355	Sheep Liver Sorbitol Dehydrogenase Length = 355		4e-07
1e3e_A	376	Mouse Class Ii Alcohol Dehydrogenase Complex With N		5e-07
2eih_A	343	Crystal Structure Of Nad-Dependent Alcohol Dehydrog		7e-07
1hdy_A	374	Three-Dimensional Structures Of Three Human Alcohol		1e-06
1htb_A	374	Crystallization Of Human Beta3 Alcohol Dehydrogenas		2e-06
1hdx_A	374	Three-Dimensional Structures Of Three Human Alcohol		2e-06
1hdz_A	374	Three-Dimensional Structures Of Three Human Alcohol		3e-06
1ht0_A	374	Human Gamma-2 Alcohol Dehydrogense Length = 374		3e-06
1hso_A	374	Human Alpha Alcohol Dehydrogenase (Adh1a) Length =		9e-06
1yb5_A	351	Crystal Structure Of Human Zeta-crystallin With Bou		3e-05
3jyl_A	325	Crystal Structures Of Pseudomonas Syringae Pv. Toma		6e-05
1ee2_A	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-05
1ee2_B	373	The Structure Of Steroid-Active Alcohol Dehydrogena		8e-05
3tqh_A	321	Structure Of The Quinone Oxidoreductase From Coxiel		5e-04
1kol_A	398	Crystal Structure Of Formaldehyde Dehydrogenase Len		5e-04
2vn8_A	375	Crystal Structure Of Human Reticulon 4 Interacting		5e-04

>pdb|1YQD|A Chain A, Sinapyl Alcohol Dehydrogenase Complexed With Nadp+ Length = 366

Iteration: 1
 Score =  309 bits (792), Expect = 1e-84,   Method: Compositional matrix adjust.
 Identities = 173/344 (50%), Positives = 222/344 (64%), Gaps = 11/344 (3%)
Query: 11  LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE 70
            GWAARD SG LSP++F+RRA G +DV   + +CGVC++D+   +N  G S YPLVPGHE
Sbjct: 18  FGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHE 77
Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
           IVG V EVG  V +  VGD VGVG  V +C  CE C + LE +C + + T+ +I  DGTI
Sbjct: 78  IVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTI 137
Query: 131 TKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLG 190
           T GGYS+++V +ERY  +  ++            GITVY+P+    +++PGK +G++GLG
Sbjct: 138 TYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPGKHIGIVGLG 197
Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID 250
           GLGH+AVKF KAFG  VTV+STS SKKEEAL   GAD F+VS D EQM+A   +LD IID
Sbjct: 198 GLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGTLDGIID 257
Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA-SL----------NIGGTKDTQEML 299
           T S  HP      LLK  G  +LVG P K    PA SL           IGG K+TQEM+
Sbjct: 258 TVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMI 317
Query: 300 EYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           ++ A H I   IE I  + +N A+ERL K DV+YRFVID+ N+L
Sbjct: 318 DFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNTL 361

>pdb|2CF5|A Chain A, Crystal Structures Of The Arabidopsis Cinnamyl Alcohol Dehydrogenases, Atcad5 Length = 357

Iteration: 1
 Score =  241 bits (614), Expect = 6e-64,   Method: Compositional matrix adjust.
 Identities = 151/348 (43%), Positives = 214/348 (61%), Gaps = 11/348 (3%)
Query: 6   ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPL 65
           A +   GWAARDPSG+LSPY++  R  G +DV+I I  CG+C+ D+  T+N  G S YP+
Sbjct: 6   AERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPM 65
Query: 66  VPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID 125
           VPGHE+VG V EVG +VS+F VGD VGVG  V  C  C  C   LE +C + ++++N + 
Sbjct: 66  VPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVY 125
Query: 126 ADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG 185
            +G  T+GG++   VVH+++  KI               G+TVY+P+    + QPG   G
Sbjct: 126 INGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQPGLRGG 185
Query: 186 VIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
           ++GLGG+GHM VK  KA G +VTV+S+S  K+EEAL  LGAD +V+ SD  +M  L  SL
Sbjct: 186 ILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSELADSL 245
Query: 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSKVKFSPASLN----------IGGTKD 294
           D++IDT    H  + Y+SLLK+ G  +L+G   + ++F    L           IG  K+
Sbjct: 246 DYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFIGSMKE 305
Query: 295 TQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
           T+EMLE+C    +   IE + ++ VN A ERL K DV+YRFV+D++ S
Sbjct: 306 TEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGS 353

>pdb|1UUF|A Chain A, Crystal Structure Of A Zinc-Type Alcohol Dehydrogenase-Like Protein Yahk Length = 369

Iteration: 1
 Score =  240 bits (613), Expect = 7e-64,   Method: Compositional matrix adjust.
 Identities = 148/341 (43%), Positives = 197/341 (57%), Gaps = 19/341 (5%)
Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
            ++A+ P   L P    RR  G +DV I I +CGVC++D+   R++   + YP VPGHEI
Sbjct: 28  AYSAKQP---LEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEI 84
Query: 72  VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT-I 130
           VG V  VG  V ++  GD VGVG  V+SC+ CE C DGLE +C     T+N+   D    
Sbjct: 85  VGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGH 144
Query: 131 TKGGYSSYIVVHERYCYKIANDYXXXXXXXXXX-XGITVYTPMMRHKMNQPGKSLGVIGL 189
           T GGYS  IVVHERY  +I +              GIT Y+P +RH    PGK +GV+G+
Sbjct: 145 TLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSP-LRHWQAGPGKKVGVVGI 203
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           GGLGHM +K   A G +V   +TS +K+E A + LGAD+ V S + ++M A  KS DFI+
Sbjct: 204 GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNSRNADEMAAHLKSFDFIL 262
Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN------------IGGTKDTQE 297
           +T +  H  D + +LLK  G   LVG P+    SP   N            IGG  +TQE
Sbjct: 263 NTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQE 322
Query: 298 MLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVID 338
           ML++CA H I   IE I  + +NEA ER+++ DVKYRFVID
Sbjct: 323 MLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVID 363

>pdb|3TWO|A Chain A, The Crystal Structure Of Cad From Helicobacter Pylori Complexed With Nadp(H) Length = 348

Iteration: 1
 Score =  214 bits (546), Expect = 5e-56,   Method: Compositional matrix adjust.
 Identities = 130/350 (37%), Positives = 192/350 (54%), Gaps = 27/350 (7%)
Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
           G+A         P+ F+R AVG  DV I I + G+C++D+    ++  +  YP++PGHEI
Sbjct: 7   GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66
Query: 72  VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDA--DGT 129
            GI+KEVG  V +FK+GD VGVG +VNSC+ C+ C +  E  C + V+T++ +D+  D  
Sbjct: 67  AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126
Query: 130 ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL 189
              GGYS+ IVV E Y   +  +            GIT Y+P+   K+ + G  +GV G 
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVTK-GTKVGVAGF 185
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           GGLG MAVK+  A G  V+V + +  KK++ALS +G   F   +D +Q K   + LDFII
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFY--TDPKQCK---EELDFII 239
Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP----------------ASLNIGGTK 293
            T    +    Y+ LL   G   LVG P  V+ +P                 SL IGG K
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLPP-VEVAPVLSVFDFIHLGNRKVYGSL-IGGIK 297
Query: 294 DTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           +TQEM+++   H IYP+I+ I  ++++ A   L     K+R+VID++ S 
Sbjct: 298 ETQEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347

>pdb|1RJW|A Chain A, Crystal Structure Of Nad(+)-Dependent Alcohol Dehydrogenase From Bacillus Stearothermophilus Strain Lld-R Length = 339

Iteration: 1
 Score =  152 bits (384), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 104/324 (32%), Positives = 157/324 (48%), Gaps = 30/324 (9%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           +V + I  CGVC+ D+      HGD     K PL+PGHE VGIV+EVG  V+  KVGD V
Sbjct: 27  EVLVRIKACGVCHTDL---HAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83
Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
           G+    ++C  C+YC  G E  C        ++D       GGY+ Y      Y  KI +
Sbjct: 84  GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPD 136
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
           +            G+T Y   ++    +PG+ + + G+GGLGH+AV++ KA GLNV  + 
Sbjct: 137 NLSFEEAAPIFCAGVTTYK-ALKVTGAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVD 195
Query: 212 TSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI---IDTASGDHPFDAYMSLLKVA 268
               K E A   LGAD  V     +  K + + +  +   + TA     F +  + ++  
Sbjct: 196 IGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG 254
Query: 269 GVYVLVGFPSKVKFSP---ASLN--------IGGTKDTQEMLEYCAAHKIYPQIETIPIE 317
           G  VLVG P +    P     LN        +G  KD QE L++ A  K+   IE  P+E
Sbjct: 255 GACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLE 314
Query: 318 NVNEALERLIKRDVKYRFVIDIQN 341
            +NE  +R++K  +  R V+ +++
Sbjct: 315 KINEVFDRMLKGQINGRVVLTLED 338

>pdb|3PII|A Chain A, Crystal Structure Of Mutant Of Ht- Alcohol Dehydrogenase With Substrate Analogue Butyramide Length = 339

Iteration: 1
 Score =  150 bits (380), Expect = 8e-37,   Method: Compositional matrix adjust.
 Identities = 103/324 (31%), Positives = 156/324 (48%), Gaps = 30/324 (9%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           +V + I  CGVC+ D+      HGD     K PL+PGHE VGIV+EVG  V+  KVGD V
Sbjct: 27  EVLVRIKACGVCHTDL---HAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGDRV 83
Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
           G+    ++C  C+YC  G E  C        ++D       GGY+ Y      Y  KI +
Sbjct: 84  GIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVD-------GGYAEYCRAAADYVVKIPD 136
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
           +            G+T Y   ++    +PG+ + + G+GG GH+AV++ KA GLNV  + 
Sbjct: 137 NLSFEEAAPIFCAGVTTYK-ALKVTGAKPGEWVAIYGIGGFGHVAVQYAKAMGLNVVAVD 195
Query: 212 TSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI---IDTASGDHPFDAYMSLLKVA 268
               K E A   LGAD  V     +  K + + +  +   + TA     F +  + ++  
Sbjct: 196 IGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRG 254
Query: 269 GVYVLVGFPSKVKFSP---ASLN--------IGGTKDTQEMLEYCAAHKIYPQIETIPIE 317
           G  VLVG P +    P     LN        +G  KD QE L++ A  K+   IE  P+E
Sbjct: 255 GACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQPLE 314
Query: 318 NVNEALERLIKRDVKYRFVIDIQN 341
            +NE  +R++K  +  R V+ +++
Sbjct: 315 KINEVFDRMLKGQINGRVVLTLED 338

>pdb|1PS0|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Cinnamyl Alcohol Dehydrogenase From Saccharomyces Cerevisiae Length = 360

Iteration: 1
 Score =  150 bits (378), Expect = 1e-36,   Method: Compositional matrix adjust.
 Identities = 107/319 (33%), Positives = 170/319 (53%), Gaps = 19/319 (5%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG-HNVSRFKVGDHVGVG 94
           D+ I I  CGVC +D+       G+ K PLV GHEIVG V ++G  + S  KVG  VGVG
Sbjct: 35  DIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVG 94
Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYX 154
             V SC +C+ C +  E +C + V T++    DG +++GGY++Y+ VHE +   I  +  
Sbjct: 95  AQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIP 154
Query: 155 XXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
                     G+TVY+P++R+    PGK +G++GLGG+G M     KA G    V+S S+
Sbjct: 155 SHLAAPLLCGGLTVYSPLVRNGCG-PGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSS 213
Query: 215 SKKEEALSLLGADKFVVS-SDLEQMKALGKSLDFIIDTASG--DHPFDAYMSLLKVAGVY 271
            K+E+A+  +GAD ++ +  + +  +    + D I+  AS   D  F+     +KV G  
Sbjct: 214 RKREDAMK-MGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRI 272
Query: 272 VLVGFPSK---VKFSPASLN--------IGGTKDTQEMLEYCAAHKIYPQIETIPI--EN 318
           V +  P +   +   P  L         +G  K+  ++L+  +   I   +ET+P+    
Sbjct: 273 VSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGEAG 332
Query: 319 VNEALERLIKRDVKYRFVI 337
           V+EA ER+ K DV+YRF +
Sbjct: 333 VHEAFERMEKGDVRYRFTL 351

>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx Length = 340

Iteration: 1
 Score =  120 bits (300), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 94/324 (29%), Positives = 143/324 (44%), Gaps = 30/324 (9%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           G   V + I   GVC+ D+       GD       P +PGHE VG V  VG  VSR K G
Sbjct: 26  GPGQVQVKIEASGVCHTDL---HAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEG 82
Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D VGV    ++C  CE+C  G E  C +   T       G    GGY  Y+V    Y   
Sbjct: 83  DRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGL 135
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
           + +             G+TVY   ++    +PG+ + + G+GGLGH+AV++ +A GL V 
Sbjct: 136 LPDKVGFVEIAPILCAGVTVYK-GLKVTDTRPGQWVVISGIGGLGHVAVQYARAMGLRVA 194
Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD---FIIDTASGDHPFDAYMSLL 265
            +    +K   A   LGA+  V + D +    L K +     ++ TA     F   + ++
Sbjct: 195 AVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGAHGVLVTAVSPKAFSQAIGMV 253
Query: 266 KVAGVYVLVGFPSKVKFSP------ASLNIGGT-----KDTQEMLEYCAAHKIYPQIETI 314
           +  G   L G P     +P        + I G+      D QE L++ A   +   + T 
Sbjct: 254 RRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVSTA 313
Query: 315 PIENVNEALERLIKRDVKYRFVID 338
            +++VN+   RL +  V+ R V+D
Sbjct: 314 KLDDVNDVFGRLREGKVEGRVVLD 337

>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol Dehydrogenase With Its Coenzyme And Weak Substrate Length = 342

Iteration: 1
 Score =  118 bits (296), Expect = 5e-27,   Method: Compositional matrix adjust.
 Identities = 87/325 (26%), Positives = 147/325 (45%), Gaps = 30/325 (9%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           G   V + I   GVC+ D+       GD       P +PGHE VG V  VG  V+R K G
Sbjct: 30  GPGQVLVKIEASGVCHTDL---HAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEG 86
Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D VG+     +C  CE+C  G E  C     T       G    GGY+ Y++    Y   
Sbjct: 87  DRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGI 139
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
           +  +            G+TVY   ++    +PG+ + + G+GGLGH+AV++ +A GL+V 
Sbjct: 140 LPKNVEFAEIAPILCAGVTVYK-GLKQTNARPGQWVAISGIGGLGHVAVQYARAMGLHVA 198
Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD---FIIDTASGDHPFDAYMSLL 265
            +    +K E A   LGA   V +   + ++A+ + +     ++ TA  +  F   + + 
Sbjct: 199 AIDIDDAKLELARK-LGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMA 257
Query: 266 KVAGVYVLVGFPSKVKFSP------ASLNIGGT-----KDTQEMLEYCAAHKIYPQIETI 314
           +  G   LVG P     +P        L+I G+      D QE L++     +   I   
Sbjct: 258 RRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGEGLVKATIHPG 317
Query: 315 PIENVNEALERLIKRDVKYRFVIDI 339
            ++++N+ L+++    ++ R V+++
Sbjct: 318 KLDDINQILDQMRAGQIEGRIVLEM 342

>pdb|3MEQ|A Chain A, Crystal Structure Of Alcohol Dehydrogenase From Brucella Mel Length = 365

Iteration: 1
 Score =  111 bits (278), Expect = 5e-25,   Method: Compositional matrix adjust.
 Identities = 88/328 (26%), Positives = 141/328 (42%), Gaps = 34/328 (10%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           G   + + I   GVC+ D+       GD       P +PGHE VG V  VG  V   K G
Sbjct: 49  GPGQIQVAIQASGVCHTDL---HAAEGDWPVKPNPPFIPGHEGVGFVSAVGSGVKHVKEG 105
Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D VG+     +C  C +C  G E  C   + T       G    GG++ Y+V    +   
Sbjct: 106 DRVGIPWLYTACGHCRHCLGGWETLCEEQLNT-------GYSVNGGFAEYVVADPNFVGH 158
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
           +  +            G+TVY   ++    +PG  + + G+GGLGHMAV++ +A GLNV 
Sbjct: 159 LPKNIDFNEIAPVLCAGVTVYK-GLKVTDTKPGDWVVISGIGGLGHMAVQYARAMGLNVA 217
Query: 209 VLSTSTSKKEEALSLLGADKFVVSSDLEQMKA-LGKSLD----FIIDTASGDHPFDAYMS 263
            +     K + A   LGA   V +  +    A + K  D     ++ TA     F+  + 
Sbjct: 218 AVDIDDRKLDLA-RRLGATVTVNAKTVADPAAYIRKETDGGAQGVLVTAVSPKAFEQALG 276
Query: 264 LLKVAGVYVLVGFPSKVKFSPASLN------------IGGTKDTQEMLEYCAAHKIYPQI 311
           ++   G   L G P    F  +  N            +G   D QE L++ A  K+   I
Sbjct: 277 MVARGGTVSLNGLPPG-DFPLSIFNMVLNGVTVRGSIVGTRLDLQESLDFAADGKVKATI 335
Query: 312 ETIPIENVNEALERLIKRDVKYRFVIDI 339
           +T  +E++N   + + + +++ R V+D+
Sbjct: 336 QTGKLEDINAIFDDMRQGNIEGRIVMDL 363

>pdb|4EEX|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Length = 348

Iteration: 1
 Score =  110 bits (276), Expect = 1e-24,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 154/339 (45%), Gaps = 27/339 (7%)
Query: 17  DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVK 76
           +P G         RA+  ++  + + +CGVC+ D+      +G+ K   V GHE +GIVK
Sbjct: 9   NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDYGN-KAGTVLGHEGIGIVK 67
Query: 77  EVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYS 136
           E+G +VS  +VGD V V  +   C  CEYC  G E  C R V   NA    G    GG +
Sbjct: 68  EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFC-REVK--NA----GYSVDGGMA 120
Query: 137 SYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
              +V   Y  K+ +             G+T Y  +    + +PG    + G GGLG++A
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLA 179
Query: 197 VKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIID 250
           +++ K  FG  V  +  +  K   A   +GAD  + S D   ++++K +  G  +   I 
Sbjct: 180 IQYAKNVFGAKVIAVDINQDKLNLA-KKIGADVIINSGDVNPVDEIKKITGGLGVQSAIV 238
Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGGTK----------DTQEML 299
            A     F+  ++ LK  G  V V  P +++  S  ++   G +          D  E  
Sbjct: 239 CAVARIAFEQAVASLKPMGKMVAVALPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAF 298
Query: 300 EYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVID 338
           ++ A  K+ P + T  +E +N+ ++ +    ++ R VID
Sbjct: 299 QFGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337

>pdb|4EEZ|A Chain A, Crystal Structure Of Lactococcus Lactis Alcohol Dehydrogenase Variant Re1 Length = 348

Iteration: 1
 Score =  108 bits (269), Expect = 5e-24,   Method: Compositional matrix adjust.
 Identities = 93/339 (27%), Positives = 153/339 (45%), Gaps = 27/339 (7%)
Query: 17  DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVK 76
           +P G         RA+  ++  + + +CGVC+ D+       G+ K   V GHE +GIVK
Sbjct: 9   NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFGN-KAGTVLGHEGIGIVK 67
Query: 77  EVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYS 136
           E+G +VS  +VGD V V  +   C  CEYC  G E  C R V   NA    G    GG +
Sbjct: 68  EIGADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFC-REVK--NA----GYSVDGGMA 120
Query: 137 SYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
              +V   Y  K+ +             G+T Y  +    + +PG    + G GGLG++A
Sbjct: 121 EEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSGV-KPGDWQVIFGAGGLGNLA 179
Query: 197 VKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIID 250
           +++ K  FG  V  +  +  K   A   +GAD  + S D   ++++K +  G  +   I 
Sbjct: 180 IQYAKNVFGAKVIAVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV 238
Query: 251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLNIGGTK----------DTQEML 299
            A     F+  ++ LK  G  V V  P +++  S  ++   G +          D  E  
Sbjct: 239 CAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAF 298
Query: 300 EYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVID 338
           ++ A  K+ P + T  +E +N+ ++ +    ++ R VID
Sbjct: 299 QFGAEGKVKPIVATRKLEEINDIIDEMKAGKIEGRMVID 337

>pdb|2HCY|A Chain A, Yeast Alcohol Dehydrogenase I, Saccharomyces Cerevisiae Fermentative Enzyme Length = 347

Iteration: 1
 Score =  104 bits (260), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 87/328 (26%), Positives = 143/328 (43%), Gaps = 36/328 (10%)
Query: 34  SDDVSITITHCGVCYADV-IWTRNKHGD----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           ++++ I + + GVC+ D+  W    HGD     K PLV GHE  G+V  +G NV  +K+G
Sbjct: 30  ANELLINVKYSGVCHTDLHAW----HGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIG 85
Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D+ G+     SC  CEYC  G E +C  +       D  G    G +  Y          
Sbjct: 86  DYAGIKWLNGSCMACEYCELGNESNCPHA-------DLSGYTHDGSFQQYATADAVQAAH 138
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNV 207
           I               GITVY  +    +   G  + + G  GGLG +AV++ KA G  V
Sbjct: 139 IPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVAISGAAGGLGSLAVQYAKAMGYRV 197
Query: 208 TVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLD----FIIDTASGDHPFDAYM 262
             +      KEE    +G + F+  + + + + A+ K+ D     +I+ +  +   +A  
Sbjct: 198 LGIDGGEG-KEELFRSIGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEAST 256
Query: 263 SLLKVAGVYVLVGFPSKVKFSPASLN------------IGGTKDTQEMLEYCAAHKIYPQ 310
             ++  G  VLVG P+  K      N            +G   DT+E L++ A   +   
Sbjct: 257 RYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSP 316
Query: 311 IETIPIENVNEALERLIKRDVKYRFVID 338
           I+ + +  + E  E++ K  +  R+V+D
Sbjct: 317 IKVVGLSTLPEIYEKMEKGQIVGRYVVD 344

>pdb|2EER|A Chain A, Structural Study Of Project Id St2577 From Sulfolobus Tokodaii Strain7 Length = 347

Iteration: 1
 Score = 94.4 bits (233), Expect = 8e-20,   Method: Compositional matrix adjust.
 Identities = 91/319 (28%), Positives = 145/319 (45%), Gaps = 39/319 (12%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
            V I I   GVC++DV   + + G+         K P+  GHEI G ++EVG  V  +  
Sbjct: 27  QVLIKIEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGRIEEVGDEVVGYSK 86
Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
           GD V V  +     +C YC  G E  C    +    I+ DG      Y+ Y++V H +Y 
Sbjct: 87  GDLVAVNPWEGEG-NCYYCRIGEEHLCDSPRWL--GINYDGA-----YAEYVLVPHYKYL 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL 205
           YK+               G+T Y  + +  ++ P K+L VIG  GGLG MA++  KA   
Sbjct: 139 YKL-RRLSAVEAAPLTCSGVTTYRAVRKASLD-PSKTLVVIGAGGGLGTMAIQIAKAVS- 195
Query: 206 NVTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFD 259
             T++     ++  EA    GAD  + +S  + +  +     GK  D +ID  + +    
Sbjct: 196 GATIIGVDVREEALEAAKRAGADYVINASSQDPVSEIRRITQGKGADAVIDLNNSEKTLS 255
Query: 260 AYMSLLKVAGVYVLVG-FPSKVKFSPA--SLN--------IGGTKDTQEMLEYCAAHKIY 308
            Y  +L   G YV+VG F + +K+     +LN        +G   D   ++    A K+ 
Sbjct: 256 IYPYVLAKQGKYVMVGLFGADLKYHAPLITLNEVQFIGSLVGNQSDFLGIMSLAEAGKVK 315
Query: 309 PQI-ETIPIENVNEALERL 326
           P + +T+ +E  NEA++ L
Sbjct: 316 PMVTKTMKLEEANEAIDNL 334

>pdb|1H2B|A Chain A, Crystal Structure Of The Alcohol Dehydrogenase From The Hyperthermophilic Archaeon Aeropyrum Pernix At 1.65a Resolution Length = 359

Iteration: 1
 Score = 85.1 bits (209), Expect = 5e-17,   Method: Compositional matrix adjust.
 Identities = 88/337 (26%), Positives = 149/337 (44%), Gaps = 45/337 (13%)
Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP---GHEIVGIVKEVGHNVSRFK 86
           R  G  DV + I   GVC+ D+   +    +   P +P   GHE VG ++EV   V   +
Sbjct: 37  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 96
Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            GD V +   V     C  C  G ++HC      F  ++ DG     G++ ++    R  
Sbjct: 97  KGDPVILHPAVTDG-TCLACRAGEDMHCEN--LEFPGLNIDG-----GFAEFMRTSHRSV 148
Query: 147 YKIANDYXXXXXXXXXX---XGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKA 202
            K+  D               GIT Y  + +  +   PG  + ++G+GGLGH+AV+  K 
Sbjct: 149 IKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKV 208
Query: 203 FGLNVTVLSTSTSKKEEALSL---LGADKFVVSS--------DLEQMKALGKSLDFIIDT 251
                TV++     KEE L L   LGAD  V +         +L + + +  ++DF+   
Sbjct: 209 M-TPATVIALDV--KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQ 265
Query: 252 ASGDH-PFDAYMSLLKVAGVYVLVGFPSKVKF-------SPASLN---IGGTKDTQEMLE 300
           A+ D+ P+     LL   G  ++VG+  +++F       S  S     +G   +  E++ 
Sbjct: 266 ATVDYTPY-----LLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVT 320
Query: 301 YCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVI 337
                K+  +++   ++ +N+ LERL K +V  R V+
Sbjct: 321 LALQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357

>pdb|1E3J|A Chain A, Ketose Reductase (Sorbitol Dehydrogenase) From Silverleaf Whitefly Length = 352

Iteration: 1
 Score = 82.4 bits (202), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 78/288 (27%), Positives = 128/288 (44%), Gaps = 26/288 (9%)
Query: 34  SDDVSITITHCGVCYADVIWTRNKHGD-----SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
            D+V + + + G+C +DV +   +HG       K P+V GHE  G V +VG NV   K G
Sbjct: 28  EDEVLLQMAYVGICGSDVHYY--EHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKG 85
Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D V V   V  CR C++C +G    C     TF A   D     G  + Y V    +C+K
Sbjct: 86  DRVAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPD----DGNLARYYVHAADFCHK 138
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
           + ++             + V+    R    Q G ++ VIG G +G ++V   KA+G  V 
Sbjct: 139 LPDNVSLEEGALLEPLSVGVHA--CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFV- 195
Query: 209 VLSTSTSKKEEALSLLGADKFVV--------SSDLEQMK-ALGKSLDFIIDTASGDHPFD 259
           V +  + ++ E     GAD  +V        SS +E+++ A+G   +  ID +  +    
Sbjct: 196 VCTARSPRRLEVAKNCGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCIT 255
Query: 260 AYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI 307
             +++ +  G  +LVG  S++   P         D + +  YC  + I
Sbjct: 256 IGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPI 303

>pdb|2XAA|A Chain A, Alcohol Dehydrogenase Adh-'a' From Rhodococcus Ruber Dsm 44541 At Ph 8.5 In Complex With Nad And Butane-1,4-Diol Length = 345

Iteration: 1
 Score = 80.5 bits (197), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 85/326 (26%), Positives = 138/326 (42%), Gaps = 27/326 (8%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKY--PLVPGHEIVGIVKEVGHNVSRFKVGDH 90
           G  ++ + +T  G+C++D+           Y  PL  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83
Query: 91  VGV-GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
           V V G +   C  C  C  G E +C R+      I   G  + G  + Y++V        
Sbjct: 84  VAVYGPW--GCGACHACARGRENYCTRAADL--GITPPGLGSPGSMAEYMIVDSARHLVP 139
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMR-HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVT 208
             D            G+T Y  + R   +  PG +  VIG+GGLGH+ ++  +A      
Sbjct: 140 IGDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVS-AAR 198
Query: 209 VLSTSTSKKEEALSL-LGADKFVVSS--------DLEQMKALGKSLDFI-----IDTASG 254
           V++        AL+  +GAD  V S         +L   +      DF+     IDTA  
Sbjct: 199 VIAVDLDDDRLALAREVGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQ 258
Query: 255 DHPFDAYMSLLKV-AGVYVLVGFPSKVKFSPASLN--IGGTKDTQEMLEYCAAHKIYPQI 311
               D ++S++ + AG +  VGF   + F  + +    G   +  E++    A ++    
Sbjct: 259 VVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHT 317
Query: 312 ETIPIENVNEALERLIKRDVKYRFVI 337
           ET  ++    A  RL +  ++ R V+
Sbjct: 318 ETFTLDEGPAAYRRLREGSIRGRGVV 343

>pdb|2H6E|A Chain A, Crystal Structure Of The D-Arabinose Dehydrogenase From Sulfolobus Solfataricus Length = 344

Iteration: 1
 Score = 78.2 bits (191), Expect = 5e-15,   Method: Compositional matrix adjust.
 Identities = 92/330 (27%), Positives = 140/330 (42%), Gaps = 43/330 (13%)
Query: 35  DDVSITITHCGVCYADV-IW--TRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           ++V I I   GVC  D+ +W     K G  + P++ GHE  G + EVG  +++ K GD+V
Sbjct: 29  EEVLIRIGGAGVCRTDLRVWKGVEAKQG-FRLPIILGHENAGTIVEVGE-LAKVKKGDNV 86
Query: 92  GV-GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKI 149
            V  T+ +    C YC +G    C   +         G  T GG+S Y++V   R+  K+
Sbjct: 87  VVYATWGDLT--CRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL 137
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMR-----HKMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204
            N             G T    + +      K  +P   + V G+GGL    ++  KA  
Sbjct: 138 -NSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEP--VVIVNGIGGLAVYTIQILKALM 194
Query: 205 LNVTVLSTSTSKKEEALSL-LGADKFVVSSDLEQM-----KALGKSLDFIIDTASGDHPF 258
            N+T++  S SKK    +L LGAD      D E +       LG S+   ID    +   
Sbjct: 195 KNITIVGISRSKKHRDFALELGADYVSEMKDAESLINKLTDGLGASI--AIDLVGTEETT 252
Query: 259 DAYMSLLKVAGVYVLVGFPSKV----KFSPASLN-------IGGTKDTQEMLEYCAAHKI 307
                LL   G  +LVG   K      F  A  N        G   D ++++    + KI
Sbjct: 253 YNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKI 312
Query: 308 YPQIETIPIENVNEALERLIKRDVKYRFVI 337
            P I  +P++++N+A   L +  V  R VI
Sbjct: 313 KPYIIKVPLDDINKAFTNLDEGRVDGRQVI 342

>pdb|1R37|A Chain A, Alcohol Dehydrogenase From Sulfolobus Solfataricus Complexed With Nad(H) And 2-Ethoxyethanol Length = 347

Iteration: 1
 Score = 75.9 bits (185), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 87/319 (27%), Positives = 134/319 (42%), Gaps = 39/319 (12%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
            V I +   GVC++DV   + + G+         K P+  GHEI G ++EVG  V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
           GD V V  +     +C YC  G E  C    +        G    G Y+ Y++V H +Y 
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
           YK+               GIT Y  + +  ++     L V   GGLG MAV+  KA    
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGA 197
Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAY 261
             +      +  EA    GAD  + +S  + +  +      K +D +ID  + +     Y
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVY 257
Query: 262 MSLLKVAGVYVLVGF---------P----SKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308
              L   G YV+VG          P    S+++F   SL +G   D   ++    A K+ 
Sbjct: 258 PKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFV-GSL-VGNQSDFLGIMRLAEAGKVK 315
Query: 309 PQI-ETIPIENVNEALERL 326
           P I +T+ +E  NEA++ L
Sbjct: 316 PMITKTMKLEEANEAIDNL 334

>pdb|1NTO|A Chain A, N249y Mutant Of Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus-Monoclinic Crystal Form Length = 347

Iteration: 1
 Score = 74.7 bits (182), Expect = 7e-14,   Method: Compositional matrix adjust.
 Identities = 88/320 (27%), Positives = 136/320 (42%), Gaps = 41/320 (12%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
            V I +   GVC++DV   + + G+         K P+  GHEI G ++EVG  V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
           GD V V  +     +C YC  G E  C    +        G    G Y+ Y++V H +Y 
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYM 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
           YK+               GIT Y  + +  ++     L V   GGLG MAV+  KA    
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-G 196
Query: 207 VTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
            T++     ++  EA    GAD  + +S  + +  +      K +D +ID    +     
Sbjct: 197 ATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSV 256
Query: 261 YMSLLKVAGVYVLVGF---------P----SKVKFSPASLNIGGTKDTQEMLEYCAAHKI 307
           Y   L   G YV+VG          P    S+++F   SL +G   D   ++    A K+
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFV-GSL-VGNQSDFLGIMRLAEAGKV 314
Query: 308 YPQI-ETIPIENVNEALERL 326
            P I +T+ +E  NEA++ L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334

>pdb|3I4C|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Adh(Ssadh) Double Mutant (W95l,N249y) Length = 347

Iteration: 1
 Score = 73.2 bits (178), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 89/320 (27%), Positives = 138/320 (43%), Gaps = 41/320 (12%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
            V I +   GVC++DV   + + G+         K P+  GHEI G ++EVG  V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
           GD V V   +    +C YC  G E  C    +    I+ DG      Y+ Y++V H +Y 
Sbjct: 87  GDLVAVNP-LQGEGNCYYCRIGEEHLCDSPRWL--GINFDGA-----YAEYVIVPHYKYM 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
           YK+               GIT Y  + +  ++     L V   GGLG MAV+  KA    
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAVS-G 196
Query: 207 VTVLSTSTSKKE-EALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
            T++     ++  EA    GAD  + +S  + +  +      K +D +ID    +     
Sbjct: 197 ATIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNYSEKTLSV 256
Query: 261 YMSLLKVAGVYVLVGF---------P----SKVKFSPASLNIGGTKDTQEMLEYCAAHKI 307
           Y   L   G YV+VG          P    S+++F   SL +G   D   ++    A K+
Sbjct: 257 YPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFV-GSL-VGNQSDFLGIMRLAEAGKV 314
Query: 308 YPQI-ETIPIENVNEALERL 326
            P I +T+ +E  NEA++ L
Sbjct: 315 KPMITKTMKLEEANEAIDNL 334

>pdb|3UKO|A Chain A, Crystal Structure Of S-Nitrosoglutathione Reductase From Arabidopsis Thaliana, Complex With Nadh Length = 378

Iteration: 1
 Score = 67.8 bits (164), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 57/240 (23%), Positives = 91/240 (37%), Gaps = 16/240 (6%)
Query: 10  CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH 69
           C    A +P+  L           + +V I I +  +C+ D      K  +  +P + GH
Sbjct: 9   CKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGH 68
Query: 70  EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCA-------------- 115
           E  GIV+ VG  V+  + GDHV +  Y   CR+C++C  G    C               
Sbjct: 69  EAAGIVESVGEGVTEVQAGDHV-IPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMND 127
Query: 116 -RSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMR 174
            +S ++ N       +    +S Y VVH+    KI                 T    +  
Sbjct: 128 RKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKIDPTAPLDKVCLLGCGVPTGLGAVWN 187
Query: 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234
               +PG ++ + GLG +G    +  K  G +  +     SKK E     G ++FV   D
Sbjct: 188 TAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETAKKFGVNEFVNPKD 247

>pdb|2DFV|A Chain A, Hyperthermophilic Threonine Dehydrogenase From Pyrococcus Horikoshii Length = 347

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G  +V I +    +C  D+ I+  N+   S  K P + GHE+ G V E+G  V   +VGD
Sbjct: 27  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 86
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK- 148
           +V V T++  C  C  C  G + H  ++   F  +D DG      ++ Y VV  +  +K 
Sbjct: 87  YVSVETHI-VCGKCYACRRG-QYHVCQNTKIF-GVDTDGV-----FAEYAVVPAQNIWKN 138
Query: 149 ---IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL 205
              I  +Y              +  P+        GKS+ + G G LG + +   KA G 
Sbjct: 139 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 191
Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
              ++S  +  + E    +GAD  +   + + +K +     G  +D  ++ +      + 
Sbjct: 192 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQ 251
Query: 261 YMSLLKVAGVYVLVG-FPSKV 280
            +  +  AG   L+G +P KV
Sbjct: 252 GLQAVTPAGRVSLLGLYPGKV 272

>pdb|2D8A|A Chain A, Crystal Structure Of Ph0655 From Pyrococcus Horikoshii Ot3 Length = 348

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/261 (24%), Positives = 112/261 (42%), Gaps = 28/261 (10%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G  +V I +    +C  D+ I+  N+   S  K P + GHE+ G V E+G  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIXGHEVAGEVVEIGPGVEGIEVGD 87
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK- 148
           +V V T++  C  C  C  G + H  ++   F  +D DG      ++ Y VV  +  +K 
Sbjct: 88  YVSVETHI-VCGKCYACRRG-QYHVCQNTKIF-GVDTDGV-----FAEYAVVPAQNIWKN 139
Query: 149 ---IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL 205
              I  +Y              +  P+        GKS+ + G G LG + +   KA G 
Sbjct: 140 PKSIPPEYATLQEPLGNAVDTVLAGPIS-------GKSVLITGAGPLGLLGIAVAKASGA 192
Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDA 260
              ++S  +  + E    +GAD  +   + + +K +     G  +D  ++ +      + 
Sbjct: 193 YPVIVSEPSDFRRELAKKVGADYVINPFEEDVVKEVXDITDGNGVDVFLEFSGAPKALEQ 252
Query: 261 YMSLLKVAGVYVLVG-FPSKV 280
            +  +  AG   L+G +P KV
Sbjct: 253 GLQAVTPAGRVSLLGLYPGKV 273

>pdb|3COS|A Chain A, Crystal Structure Of Human Class Ii Alcohol Dehydrogenase (Adh4) In Complex With Nad And Zn Length = 381

Iteration: 1
 Score = 66.2 bits (160), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 99/252 (39%), Gaps = 27/252 (10%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V I I    +C+ D     +K     +P++ GHE  GIV+ +G  V+  K GD V +  
Sbjct: 37  EVRIQIIATSLCHTDATVIDSKFEGLAFPVIVGHEAAGIVESIGPGVTNVKPGDKV-IPL 95
Query: 96  YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITK-------------------GGYS 136
           Y   CR C++C   L   C + +    +  +D  + +                     +S
Sbjct: 96  YAPLCRKCKFCLSPLTNLCGK-ISNLKSPASDQQLMEDKTSRFTCKGKPVYHFFGTSTFS 154
Query: 137 SYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
            Y VV +    KI +D              T Y   + +    PG +  V GLGG+G  A
Sbjct: 155 QYTVVSDINLAKIDDDANLERVCLLGCGFSTGYGAAINNAKVTPGSTCAVFGLGGVGLSA 214
Query: 197 VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-----EQMKALGK-SLDFIID 250
           V   KA G +  +     S+K      LGA   +   DL     E +  L K  +DF +D
Sbjct: 215 VMGCKAAGASRIIGIDINSEKFVKAKALGATDCLNPRDLHKPIQEVIIELTKGGVDFALD 274
Query: 251 TASGDHPFDAYM 262
            A G     A +
Sbjct: 275 CAGGSETMKAAL 286

>pdb|1JVB|A Chain A, Alcohol Dehydrogenase From The Archaeon Sulfolobus Solfataricus Length = 347

Iteration: 1
 Score = 65.9 bits (159), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 86/319 (26%), Positives = 130/319 (40%), Gaps = 39/319 (12%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD--------SKYPLVPGHEIVGIVKEVGHNVSRFKV 87
            V I +   GVC++DV   + + G+         K P+  GHEI G ++EVG  V  +  
Sbjct: 27  QVLIKVEAAGVCHSDVHXRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVGYSK 86
Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-HERYC 146
           GD V V  +     +C YC  G E  C    +        G    G Y+ Y++V H +Y 
Sbjct: 87  GDLVAVNPWQGEG-NCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYX 138
Query: 147 YKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN 206
           YK+               GIT Y  + +  ++     L V   GGLG  AV+  KA    
Sbjct: 139 YKL-RRLNAVEAAPLTCSGITTYRAVRKASLDPTKTLLVVGAGGGLGTXAVQIAKAVSGA 197
Query: 207 VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHPFDAY 261
             +      +  EA    GAD  + +S  + +  +      K +D +ID  + +     Y
Sbjct: 198 TIIGVDVREEAVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVY 257
Query: 262 MSLLKVAGVYVLVGF---------P----SKVKFSPASLNIGGTKDTQEMLEYCAAHKIY 308
              L   G YV VG          P    S+++F   SL +G   D   +     A K+ 
Sbjct: 258 PKALAKQGKYVXVGLFGADLHYHAPLITLSEIQFV-GSL-VGNQSDFLGIXRLAEAGKVK 315
Query: 309 PQI-ETIPIENVNEALERL 326
           P I +T  +E  NEA++ L
Sbjct: 316 PXITKTXKLEEANEAIDNL 334

>pdb|1D1T|A Chain A, Mutant Of Human Sigma Alcohol Dehydrogenase With Leucine At Position 141 Length = 373

Iteration: 1
 Score = 65.5 bits (158), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 120/299 (40%), Gaps = 34/299 (11%)
Query: 23  SPYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG 79
            P+S     V    + +V I I   G+C  D    +     SK+P++ GHE  GIV+ +G
Sbjct: 19  QPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIG 77
Query: 80  HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT---------- 129
             V+  K GD V +  ++  CR+C  C +     C RS  T   + ADGT          
Sbjct: 78  EGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
              +    ++ Y VV E    KI +               T Y   ++    +PG +  V
Sbjct: 137 HHFLNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 187 IGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
            GLGG+G   +   K+ G +  + +  +  K E+A++ +GA + +   D    K + + L
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISPKD--STKPISEVL 253
Query: 246 DFIIDTASG---------DHPFDAYMSLLKVAGVYVLVGFPSKVK---FSPASLNIGGT 292
             +     G         +   DA  S     G  V+VG P   K   + P  L  G T
Sbjct: 254 SEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRT 312

>pdb|1AGN|A Chain A, X-Ray Structure Of Human Sigma Alcohol Dehydrogenase Length = 373

Iteration: 1
 Score = 65.5 bits (158), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 76/299 (25%), Positives = 120/299 (40%), Gaps = 34/299 (11%)
Query: 23  SPYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVG 79
            P+S     V    + +V I I   G+C  D    +     SK+P++ GHE  GIV+ +G
Sbjct: 19  QPFSIEEIEVAPPKTKEVRIKILATGICRTDDHVIKGTM-VSKFPVIVGHEATGIVESIG 77
Query: 80  HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT---------- 129
             V+  K GD V +  ++  CR+C  C +     C RS  T   + ADGT          
Sbjct: 78  EGVTTVKPGDKV-IPLFLPQCRECNACRNPDGNLCIRSDITGRGVLADGTTRFTCKGKPV 136
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
              +    ++ Y VV E    KI +               T Y   ++    +PG +  V
Sbjct: 137 HHFMNTSTFTEYTVVDESSVAKIDDAAPPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVV 196
Query: 187 IGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
            GLGG+G   +   K+ G +  + +  +  K E+A++ +GA + +   D    K + + L
Sbjct: 197 FGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAMA-VGATECISPKD--STKPISEVL 253
Query: 246 DFIIDTASG---------DHPFDAYMSLLKVAGVYVLVGFPSKVK---FSPASLNIGGT 292
             +     G         +   DA  S     G  V+VG P   K   + P  L  G T
Sbjct: 254 SEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSAKMLTYDPMLLFTGRT 312

>pdb|2DQ4|A Chain A, Crystal Structure Of Threonine 3-Dehydrogenase Length = 343

Iteration: 1
 Score = 65.1 bits (157), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 63/258 (24%), Positives = 112/258 (43%), Gaps = 19/258 (7%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNK--HGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G  ++ + +    +C  D+ IW  +    G  + PLV GHE  G+V+ VG  V R +VGD
Sbjct: 24  GPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVGD 83
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
           HV + +++  C  C  C  G    C  +      +D D     GG++ Y+VV     +  
Sbjct: 84  HVSLESHI-VCHACPACRTGNYHVCLNT--QILGVDRD-----GGFAEYVVVPAENAWVN 135
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
             D            G  V+T      ++  GKS+ + G G +G MA    +A G    +
Sbjct: 136 PKDLPFEVAAILEPFGNAVHTVYAGSGVS--GKSVLITGAGPIGLMAAMVVRASGAG-PI 192
Query: 210 LSTSTSKKEEALSLLGADKFV--VSSDLEQM--KALGKSLDFIIDTASGDHPFDAYMSLL 265
           L +  +    A +   AD+ V  +  DL ++  +  G  ++ +++ +  +      +  L
Sbjct: 193 LVSDPNPYRLAFARPYADRLVNPLEEDLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMAL 252
Query: 266 KVAGVYVLVGFPS-KVKF 282
              G   ++G PS  ++F
Sbjct: 253 IPGGEARILGIPSDPIRF 270

>pdb|4DL9|A Chain A, Crystal Structure Of S-nitrosoglutathione Reductase From Tomato (solanum Lycopersicum) In Complex With Nad+ Length = 396

Iteration: 1
 Score = 64.7 bits (156), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 57/243 (23%), Positives = 92/243 (37%), Gaps = 16/243 (6%)
Query: 10  CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH 69
           C    A +P+  L           + +V + + +  +C+ D      K  +  +P V GH
Sbjct: 27  CKAAVAWEPNKPLVIEDVQVAPPQAGEVRVKVLYTALCHTDAYTWSGKDPEGLFPCVLGH 86
Query: 70  EIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCA-------------- 115
           E  GIV+ VG  V+  + GDHV +  Y   CR+C++C  G    C               
Sbjct: 87  EAAGIVESVGEGVTEVQPGDHV-IPCYQAECRECKFCKSGKTNLCGKVRAATGVGVMMND 145
Query: 116 -RSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMR 174
            +S ++ N       +    +S Y VVH+    KI                 T    +  
Sbjct: 146 RKSRFSINGKPIYHFMGTSTFSQYTVVHDVSVAKIDPVAPLEKVCLLGCGVPTGLGAVWN 205
Query: 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234
               +PG  + V GLG +G    +  KA G +  +     SKK +     G  +F+   +
Sbjct: 206 TAKVEPGSIVAVFGLGTVGLAVAEGAKAAGASRIIGIDIDSKKFDRAKNFGVTEFINPKE 265
Query: 235 LEQ 237
            EQ
Sbjct: 266 HEQ 268

>pdb|4A2C|A Chain A, Crystal Structure Of Galactitol-1-Phosphate Dehydrogenase From Escherichia Coli Length = 346

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 63/225 (28%), Positives = 98/225 (43%), Gaps = 18/225 (8%)
Query: 34  SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV 93
            D+V + I   G+C +D+     K+G   YP+  GHE  G +  VG  V     GD V  
Sbjct: 25  QDEVRVKIASSGLCGSDLPRI-FKNGAHYYPITLGHEFSGYIDAVGSGVDDLHPGDAVAC 83
Query: 94  GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY 153
              +  C  C  C  G    CA+        D  G+   GG++ YIVV  +  + +  D 
Sbjct: 84  VPLL-PCFTCPECLKGFYSQCAK-------YDFIGSRRDGGFAEYIVVKRKNVFALPTDM 135
Query: 154 XXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLST 212
                       ITV             K++ +IG G +G +A++   A G  +VT +  
Sbjct: 136 PIEDGAFIEP--ITVGLHAFHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDI 193
Query: 213 STSKKEEALSLLGADKFVVSSDLE--QMKALGKSLDF---IIDTA 252
           S+ K   A S  GA +   SS++   QM+++ + L F   I++TA
Sbjct: 194 SSEKLALAKS-FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETA 237

>pdb|1CDO|A Chain A, Alcohol Dehydrogenase (E.C.1.1.1.1) (Ee Isozyme) Complexed With Nicotinamide Adenine Dinucleotide (Nad), And Zinc Length = 374

Iteration: 1
 Score = 63.5 bits (153), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 66/265 (24%), Positives = 107/265 (40%), Gaps = 24/265 (9%)
Query: 34  SDDVSITITHCGVCYADVI-WTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
           ++++ I I   GVC+ D+      KH D  +P+V GHE  GIV+ VG  V+ F+ G+ V 
Sbjct: 33  ANEIRIKIIATGVCHTDLYHLFEGKHKDG-FPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90
Query: 93  VGTYVNSCRDCEYCNDGLEVHCAR--------------SVYTFNAIDADGTITKGGYSSY 138
           +  +++ C +C +C       C +              + +T         +    +S Y
Sbjct: 91  IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150
Query: 139 IVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVK 198
            VV++    KI                 T +   +     +PG +  V GLG +G  AV 
Sbjct: 151 TVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM 210
Query: 199 FGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD----LEQM--KALGKSLDFIIDTA 252
              + G    +       K E   + GA  FV  +D    + Q+  K     +DF ++  
Sbjct: 211 GCHSAGAKRIIAVDLNPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECV 270
Query: 253 SGDHPF-DAYMSLLKVAGVYVLVGF 276
                  +A  S LK  GV VLVG+
Sbjct: 271 GNVGVMRNALESCLKGWGVSVLVGW 295

>pdb|1F8F|A Chain A, Crystal Structure Of Benzyl Alcohol Dehydrogenase From Acinetobacter Calcoaceticus Length = 371

Iteration: 1
 Score = 61.6 bits (148), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 64/285 (22%), Positives = 110/285 (38%), Gaps = 26/285 (9%)
Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           R    D+V + +   G+C+ D+I  R++      P V GHE  GI++ +G NV+  +VGD
Sbjct: 27  RQPQGDEVLVKVVATGMCHTDLI-VRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGD 85
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSV-YTFNAIDADGT---------------ITKG 133
           HV V +Y   C  C  CN G   +C+      F+  D++G                  + 
Sbjct: 86  HV-VLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQS 143
Query: 134 GYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLG 193
            +++Y +  E    K+  D              T     +      P  S    G G +G
Sbjct: 144 SFATYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVG 203
Query: 194 HMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD----FII 249
             A+   K  G ++ +       + E    LGA   + S   + + A+ +  D    F +
Sbjct: 204 LSALLAAKVCGASIIIAVDIVESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFAL 263
Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGG 291
           ++          +  L + G   +VG P   +  +F    L +GG
Sbjct: 264 ESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGG 308

>pdb|4ILK|A Chain A, Crystal Structure Of Short Chain Alcohol Dehydrogenase (rspb) From E. Coli Cft073 (efi Target Efi-506413) Complexed With Cofactor Nadh Length = 359

Iteration: 1
 Score = 60.8 bits (146), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 65/252 (25%), Positives = 102/252 (40%), Gaps = 22/252 (8%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V + +   G+C +D    R  +  +KYP V GHE  G++  VG  V   +VG+ V V  
Sbjct: 46  EVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFGVIDAVGEGVESARVGERVAVDP 105
Query: 96  YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI----AN 151
            V SC  C  C+ G    C  +      + AD     GG+S Y VV  +  +KI    A+
Sbjct: 106 VV-SCGHCYPCSIGKPNVC--TTLAVLGVHAD-----GGFSEYAVVPAKNAWKIPEAVAD 157
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA-FGLNVTVL 210
            Y             T+   +  H       ++ V G G +G   V+  K  + +   ++
Sbjct: 158 QYAVMIEP------FTIAANVTGHGQPTENDTVLVYGAGPIGLTIVQVLKGVYNVKNVIV 211
Query: 211 STSTSKKEEALSLLGADKFVVSSDL---EQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
           +    ++ E     GAD  + +S     E     G     IID A         ++L   
Sbjct: 212 ADRIDERLEKAKESGADWAINNSQTPLGESFAEKGIKPTLIIDAACHPSILKEAVTLASP 271
Query: 268 AGVYVLVGFPSK 279
           A   VL+GF S+
Sbjct: 272 AARIVLMGFSSE 283

>pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363

Iteration: 1
 Score = 59.3 bits (142), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 59/228 (25%), Positives = 97/228 (42%), Gaps = 18/228 (7%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G  D+ +      + Y D +      G D  +P VP  +  G+V+ VG +V+RF+ GD V
Sbjct: 52  GEHDIIVRTLAVSLNYRDKLVLETGXGLDLAFPFVPASDXSGVVEAVGKSVTRFRPGDRV 111
Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
            + T+           DGL     R+     A +  G    G  S Y+V+ E +      
Sbjct: 112 -ISTFAPGWL------DGLRPGTGRT----PAYETLGGAHPGVLSEYVVLPEGWFVAAPK 160
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
                        G+T +  ++     + G  + V G GG+    ++  KA G  V V S
Sbjct: 161 SLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTS 220
Query: 212 TSTSKKEEALSLLGADKFV--VSSD-LEQMKAL--GKSLDFIIDTASG 254
           +S  K + A + LGAD  +  +  D +E++ AL   +  D I++ A G
Sbjct: 221 SSREKLDRAFA-LGADHGINRLEEDWVERVYALTGDRGADHILEIAGG 267

>pdb|3GFB|A Chain A, L-Threonine Dehydrogenase (Tktdh) From The Hyperthermophilic Archaeon Thermococcus Kodakaraensis Length = 350

Iteration: 1
 Score = 58.9 bits (141), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 57/225 (25%), Positives = 94/225 (41%), Gaps = 21/225 (9%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G  +V I +    +C  D+ I+  N+   S  K P + GHE+ G V EVG  V   +VGD
Sbjct: 28  GPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEVGPGVEDLQVGD 87
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
           ++ V T++  C  C  C      H  ++   F  +D DG      ++ Y +V  +  +K 
Sbjct: 88  YISVETHI-VCGKCYACKHN-RYHVCQNTKIF-GVDMDGV-----FAHYAIVPAKNAWKN 139
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
             D            G  V T +        G+S  + G G LG + +   KA G    +
Sbjct: 140 PKDMPPEYAALQEPLGNAVDTVLAGPIA---GRSTLITGAGPLGLLGIAVAKASGAYPVI 196
Query: 210 LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG 254
           +S  +  + +    +GAD  V   + + +K       F++D   G
Sbjct: 197 VSEPSEFRRKLAKKVGADYVVNPFEEDPVK-------FVMDITDG 234

>pdb|4EJ6|A Chain A, Crystal Structure Of A Putative Zinc-Binding Dehydrogenase (Target Psi-012003) From Sinorhizobium Meliloti 1021 Length = 370

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 63/264 (23%), Positives = 105/264 (39%), Gaps = 25/264 (9%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
           G DD+ + +  CG+C  D       HG+  S  P+  GHE  GIV E G  V     G  
Sbjct: 46  GPDDLLVKVEACGICGTD---RHLLHGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGAR 102
Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
           +  G    SC  C  C  G  V+  R+      + A G    GG++ Y++V  +  ++I 
Sbjct: 103 I-TGDPNISCGRCPQCQAG-RVNLCRN------LRAIGIHRDGGFAEYVLVPRKQAFEIP 154
Query: 151 NDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVL 210
                            ++   +     + G ++ ++G G +G + V+  +  G    +L
Sbjct: 155 LTLDPVHGAFCEPLACCLHG--VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGATTVIL 212
Query: 211 STSTSKKEEALSLLGADKFVVSSDLEQMKALGKS-------LDFIIDTASGDHPFDAYMS 263
           ST  + K      +GA   V  S  + ++A+          +D +I+ A           
Sbjct: 213 STRQATKRRLAEEVGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTR 272
Query: 264 LLKVAGVYVLVG-FPS--KVKFSP 284
           L K  G  V++G  P   KV+  P
Sbjct: 273 LAKAGGTVVILGVLPQGEKVEIEP 296

>pdb|1PL7|A Chain A, Human Sorbitol Dehydrogenase (Apo) Length = 356

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 131/320 (40%), Gaps = 35/320 (10%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G ++V + +   G+C +DV  W   + G+   K P+V GHE  G V++VG +V   K GD
Sbjct: 30  GPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
            V +        D E+C  G   + + S++       DG + +     +   +  +CYK+
Sbjct: 90  RVAIEPGAPREND-EFCKMG-RYNLSPSIFFCATPPDDGNLCR-----FYKHNAAFCYKL 142
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG----VIGLGGLGHMAVKFGKAFGL 205
            ++             + +      H   + G +LG    V G G +G + +   KA G 
Sbjct: 143 PDNVTFEEGALIEPLSVGI------HACRRGGVTLGHKVLVCGAGPIGMVTLLVAKAMGA 196
Query: 206 NVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKA------LGKSLDFIIDTASGDHPF 258
              V++  ++ +      +GAD  + +S +  Q  A      LG   +  I+    +   
Sbjct: 197 AQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256
Query: 259 DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIEN 318
            A +   +  G  VLVG  S++   P         D + +  YC    +   I  +  ++
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPV--AISMLASKS 314
Query: 319 VNEALERLIKRDVKYRFVID 338
           VN      +K  V +RF ++
Sbjct: 315 VN------VKPLVTHRFPLE 328

>pdb|1VJ0|A Chain A, Crystal Structure Of Alcohol Dehydrogenase (Tm0436) From Thermotoga Maritima At 2.00 A Resolution Length = 380

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 68/256 (26%), Positives = 108/256 (42%), Gaps = 19/256 (7%)
Query: 37  VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH-----NVSRFKVGDHV 91
           + + I   GVC +DV   R +      P++ GHE  G V EV       N    K GD +
Sbjct: 45  ILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLKPGDLI 104
Query: 92  GVGTYVNSCRDCEYCNDGLEVHCA--RSVYTFNAIDADGTITKGGYSSYIVVH-ERYCYK 148
            V     +C +C +C    E +    R VY  N   ++    +G YSS+IV+  E    K
Sbjct: 105 -VWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK 163
Query: 149 IANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NV 207
           ++              G T Y     +  +  GK++ + G G LG   V   ++ G  NV
Sbjct: 164 VSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENV 223
Query: 208 TVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKAL-----GKSLDFIIDTASGDHPFD 259
            V++ S ++ + A   +GAD  +    +S  E+ KA+     G+  DFI++         
Sbjct: 224 IVIAGSPNRLKLA-EEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALL 282
Query: 260 AYMSLLKVAGVYVLVG 275
               LL+  G Y + G
Sbjct: 283 EGSELLRRGGFYSVAG 298

>pdb|3FBG|A Chain A, Crystal Structure Of A Putative Arginate Lyase From Staphylococcus Haemolyticus Length = 346

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 60/227 (26%), Positives = 95/227 (41%), Gaps = 44/227 (19%)
Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           SK P V G + +G+V+ VG+ V+ F  GD V    Y +   D                  
Sbjct: 57  SKAPRVLGFDAIGVVESVGNEVTMFNQGDIV----YYSGSPD------------------ 94
Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMM------R 174
                       G  + Y +++ER   K   +            GIT Y  +       R
Sbjct: 95  ----------QNGSNAEYQLINERLVAKAPKNISAEQAVSLPLTGITAYETLFDVFGISR 144
Query: 175 HKMNQPGKSLGVI-GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV--V 231
           ++    GK+L +I G GG+G +A +  KA+GL V + + S ++  E    +GAD  +   
Sbjct: 145 NRNENEGKTLLIINGAGGVGSIATQIAKAYGLRV-ITTASRNETIEWTKKMGADIVLNHK 203
Query: 232 SSDLEQMKALGKSL-DFIIDTASGDHPFDAYMSLLKVAG-VYVLVGF 276
            S L Q K  G  L D++  T + D  +D  + L+K  G +  +V F
Sbjct: 204 ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAF 250

>pdb|3QJ5|A Chain A, S-Nitrosoglutathione Reductase (Gsnor) In Complex With N6022 Length = 374

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 8   KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
           K  + W A  P   LS          + +V I I    VC+ D         +  +P++ 
Sbjct: 9   KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 65
Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
           GHE  GIV+ VG  V++ K GD V +  Y+  C +C++C +     C +  V     +  
Sbjct: 66  GHEGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 124
Query: 127 DGT-------------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
           DGT             +    +S Y VV +    KI +             GI T Y   
Sbjct: 125 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 183
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
           +     +PG    V GLGG+G +AV  G
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 210

>pdb|1MC5|A Chain A, Ternary Complex Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With S-(Hydroxymethyl)glutathione And Nadh Length = 374

Iteration: 1
 Score = 56.6 bits (135), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 8   KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
           K  + W A  P   LS          + +V I I    VC+ D         +  +P++ 
Sbjct: 9   KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 65
Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
           GHE  GIV+ VG  V++ K GD V +  Y+  C +C++C +     C +  V     +  
Sbjct: 66  GHEGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 124
Query: 127 DGT-------------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
           DGT             +    +S Y VV +    KI +             GI T Y   
Sbjct: 125 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 183
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
           +     +PG    V GLGG+G +AV  G
Sbjct: 184 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 210

>pdb|1TEH|A Chain A, Structure Of Human Liver Chichi Alcohol Dehydrogenase (A Glutathione- Dependent Formaldehyde Dehydrogenase) Length = 373

Iteration: 1
 Score = 56.2 bits (134), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 56/208 (26%), Positives = 83/208 (39%), Gaps = 21/208 (10%)
Query: 8   KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
           K  + W A  P   LS          + +V I I    VC+ D         +  +P++ 
Sbjct: 8   KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 64
Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
           GHE  GIV+ VG  V++ K GD V +  Y+  C +C++C +     C +  V     +  
Sbjct: 65  GHEGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123
Query: 127 DGT-------------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
           DGT             +    +S Y VV +    KI +             GI T Y   
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 182
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
           +     +PG    V GLGG+G +AV  G
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 209

>pdb|1PL6|A Chain A, Human SdhNADHINHIBITOR COMPLEX Length = 356

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 72/320 (22%), Positives = 128/320 (40%), Gaps = 35/320 (10%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G ++V +     G+C +DV  W   + G+   K P V GHE  G V++VG +V   K GD
Sbjct: 30  GPNEVLLRXHSVGICGSDVHYWEYGRIGNFIVKKPXVLGHEASGTVEKVGSSVKHLKPGD 89
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
            V +        D E+C  G   + + S++       DG + +     +   +  +CYK+
Sbjct: 90  RVAIEPGAPREND-EFCKXG-RYNLSPSIFFCATPPDDGNLCR-----FYKHNAAFCYKL 142
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG----VIGLGGLGHMAVKFGKAFGL 205
            ++             + +      H   + G +LG    V G G +G + +   KA G 
Sbjct: 143 PDNVTFEEGALIEPLSVGI------HACRRGGVTLGHKVLVCGAGPIGXVTLLVAKAXGA 196
Query: 206 NVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKA------LGKSLDFIIDTASGDHPF 258
              V++  ++ +      +GAD  + +S +  Q  A      LG   +  I+    +   
Sbjct: 197 AQVVVTDLSATRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASI 256
Query: 259 DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIEN 318
            A +   +  G  VLVG  S+    P         D + +  YC    +   I  +  ++
Sbjct: 257 QAGIYATRSGGTLVLVGLGSEXTTVPLLHAAIREVDIKGVFRYCNTWPV--AISXLASKS 314
Query: 319 VNEALERLIKRDVKYRFVID 338
           VN      +K  V +RF ++
Sbjct: 315 VN------VKPLVTHRFPLE 328

>pdb|3IP1|A Chain A, Structure Of Putative Alcohol Dehydrogenase (Tm_042) From Thermotoga Maritima Length = 404

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 52/237 (21%), Positives = 91/237 (38%), Gaps = 35/237 (14%)
Query: 36  DVSITITHCGVCYADVIWTRNKH-------GDSKYPLVPGHEIVGIVKEVGHNV------ 82
           ++ I +  CG+C +DV   +          G + +P+  GHE  G+V E G         
Sbjct: 57  EIIIKVKACGICGSDVHXAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTN 116
Query: 83  SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVH 142
            RF++G+ V     +  C  C  C +G   HC         ++  G    G ++ Y+ V 
Sbjct: 117 KRFEIGEPVCAEEXL-WCGHCRPCAEGFPNHCEN-------LNELGFNVDGAFAEYVKVD 168
Query: 143 ERYCYKIAN-------DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
            +Y + +         D             +     ++R    +PG ++ ++G G +G  
Sbjct: 169 AKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLA 228
Query: 196 AVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-------VSSDLEQMKALGKSL 245
           AV   K  G +  +LS  +  +      LGAD  +       V + L+    LG  L
Sbjct: 229 AVAILKHAGASKVILSEPSEVRRNLAKELGADHVIDPTKENFVEAVLDYTNGLGAKL 285

>pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 60/243 (24%), Positives = 104/243 (42%), Gaps = 39/243 (16%)
Query: 36  DVSITITHCGVCYADVIWTR-NKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           ++ I +  CG+ + D++  + N     K PLVPG E  GIV+ +G +V  +++GD V   
Sbjct: 32  ELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRVM-- 89
Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYX 154
            +VN                      +NA           ++  +     + YKI +D  
Sbjct: 90  AFVN----------------------YNA-----------WAEVVCTPVEFVYKIPDDMS 116
Query: 155 XXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
                      +T Y  +      + G S+ V   GG    AV    +   NVTV  T++
Sbjct: 117 FSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTAS 176
Query: 215 SKKEEALSLLGADKFVVSSD-LEQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYV 272
           + K EA+       F  ++D ++++K +  + +D ++D   GD+     +SLLK  G Y+
Sbjct: 177 TFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDNTGKG-LSLLKPLGTYI 235
Query: 273 LVG 275
           L G
Sbjct: 236 LYG 238

>pdb|1P0C|A Chain A, Crystal Structure Of The Nadp(H)-Dependent Vertebrate Alcohol Dehydrogenase (Adh8) Length = 373

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 74/299 (24%), Positives = 119/299 (39%), Gaps = 30/299 (10%)
Query: 5   TASKD--CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSK 62
           TA KD  C    A +P   LS  +       + +V I I   G+C +D    +     SK
Sbjct: 3   TAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEII-PSK 61
Query: 63  YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR------ 116
           +P++ GHE VG+V+ +G  V+  K GD V +  +V  C  C  C       C +      
Sbjct: 62  FPVILGHEAVGVVESIGAGVTCVKPGDKV-IPLFVPQCGSCRACKSSNSNFCEKNDMGAK 120
Query: 117 --------SVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-T 167
                   S +T         +    ++ Y VV +    KI  D            G  T
Sbjct: 121 TGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKI--DPKAPLESCLIGCGFAT 178
Query: 168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV-LSTSTSKKEEALSLLGA 226
            Y   +      PG +  V GLGG+G  A+   KA G +  + + T   K  +A+  LGA
Sbjct: 179 GYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAIE-LGA 237
Query: 227 DKFVVSSDLEQ------MKALGKSLDFIIDTASG-DHPFDAYMSLLKVAGVYVLVGFPS 278
            + +   D ++       +     +D+ ++ A   +   +A  S    +GV V++G  S
Sbjct: 238 TECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLAS 296

>pdb|2FZW|A Chain A, Structure Of The Binary Complex Of The E67l Mutant Of Human Glutathione-Dependent Formaldehyde Dehydrogenase With Nad(H) Length = 373

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 55/208 (26%), Positives = 82/208 (39%), Gaps = 21/208 (10%)
Query: 8   KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
           K  + W A  P   LS          + +V I I    VC+ D         +  +P++ 
Sbjct: 8   KAAVAWEAGKP---LSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVIL 64
Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR-SVYTFNAIDA 126
           GH   GIV+ VG  V++ K GD V +  Y+  C +C++C +     C +  V     +  
Sbjct: 65  GHLGAGIVESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMP 123
Query: 127 DGT-------------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI-TVYTPM 172
           DGT             +    +S Y VV +    KI +             GI T Y   
Sbjct: 124 DGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKI-DPLAPLDKVCLLGCGISTGYGAA 182
Query: 173 MRHKMNQPGKSLGVIGLGGLGHMAVKFG 200
           +     +PG    V GLGG+G +AV  G
Sbjct: 183 VNTAKLEPGSVCAVFGLGGVG-LAVIMG 209

>pdb|1E3L|A Chain A, P47h Mutant Of Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 86/228 (37%), Gaps = 36/228 (15%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V I +    VC+ D+  T  K   + +P+V GHE  GIV+ VG  V+ FK GD V +  
Sbjct: 35  EVRIQVIATCVCHTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 96  YVNSCRDCEYCNDGLEVHC--------------------------ARSVYTFNAIDADGT 129
           +   C+ C+ C   L   C                           RS+Y F  + +   
Sbjct: 93  FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS--- 149
Query: 130 ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL 189
                +S Y VV E    ++ ++              + Y   +      PG +  V GL
Sbjct: 150 -----FSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL 204
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
           G +G  A+   K  G +  +      +K      LGA   +   +L++
Sbjct: 205 GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDK 252

>pdb|3QE3|A Chain A, Sheep Liver Sorbitol Dehydrogenase Length = 355

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 70/322 (21%), Positives = 130/322 (40%), Gaps = 39/322 (12%)
Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGD--SKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
           G ++V + +   G+C +DV  W   + GD   K P+V GHE  G V +VG  V   + GD
Sbjct: 29  GPNEVLLKMHSVGICGSDVHYWQHGRIGDFVVKKPMVLGHEASGTVVKVGSLVRHLQPGD 88
Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
            V +        D E+C  G   + + +++       DG + +     +   +  +CYK+
Sbjct: 89  RVAIQPGAPRQTD-EFCKIG-RYNLSPTIFFCATPPDDGNLCR-----FYKHNANFCYKL 141
Query: 150 ANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLG----VIGLGGLGHMAVKFGKAFGL 205
            ++             + +      H   + G +LG    V G G +G + +   KA G 
Sbjct: 142 PDNVTFEEGALIEPLSVGI------HACRRAGVTLGNKVLVCGAGPIGLVNLLAAKAMGA 195
Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI--------IDTASGDHP 257
              V++  ++ +      +GAD F++    E  + + K ++ +        I+    +  
Sbjct: 196 AQVVVTDLSASRLSKAKEVGAD-FILEISNESPEEIAKKVEGLLGSKPEVTIECTGVETS 254
Query: 258 FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPI 316
             A +      G  VLVG  S++   P         D + +  YC     +P  I  +  
Sbjct: 255 IQAGIYATHSGGTLVLVGLGSEMTSVPLVHAATREVDIKGVFRYC---NTWPMAISMLAS 311
Query: 317 ENVNEALERLIKRDVKYRFVID 338
           ++VN      +K  V +RF ++
Sbjct: 312 KSVN------VKPLVTHRFPLE 327

>pdb|1E3E|A Chain A, Mouse Class Ii Alcohol Dehydrogenase Complex With Nadh Length = 376

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 53/228 (23%), Positives = 85/228 (37%), Gaps = 36/228 (15%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
           +V I +    VC  D+  T  K   + +P+V GHE  GIV+ VG  V+ FK GD V +  
Sbjct: 35  EVRIQVIATCVCPTDINATDPKK-KALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPF 92
Query: 96  YVNSCRDCEYCNDGLEVHC--------------------------ARSVYTFNAIDADGT 129
           +   C+ C+ C   L   C                           RS+Y F  + +   
Sbjct: 93  FAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSS--- 149
Query: 130 ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL 189
                +S Y VV E    ++ ++              + Y   +      PG +  V GL
Sbjct: 150 -----FSQYTVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL 204
Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ 237
           G +G  A+   K  G +  +      +K      LGA   +   +L++
Sbjct: 205 GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAKALGATDCLNPRELDK 252

>pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343

Iteration: 1
 Score = 51.6 bits (122), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 59/226 (26%), Positives = 91/226 (40%), Gaps = 18/226 (7%)
Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPL--VPGHEIVGIVKEVGHNVSRFKVGDH 90
           G  +V + +    + + DV W R      K PL  V G +  G+V  VG  V  F  GD 
Sbjct: 26  GPKEVRVRLKAAALNHLDV-WVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDE 84
Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
           V +   + SC  CE C  G +  C R  Y        GT     Y+ Y+V+ E       
Sbjct: 85  VVINPGL-SCGRCERCLAGEDNLCPR--YQILGEHRHGT-----YAEYVVLPEANLAPKP 136
Query: 151 NDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTV 209
            +             +T +  ++     +PG  + V+  G G+   A++  K FG  V  
Sbjct: 137 KNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIA 196
Query: 210 LSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIID 250
            + S  K   A + LGAD+ V  +  +  K +     GK  D ++D
Sbjct: 197 TAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRRLTGGKGADKVVD 241

>pdb|1HDY|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 106/294 (36%), Gaps = 34/294 (11%)
Query: 21  VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
           V  P+S     V      +V I +   G+C+ D     + +  +  P++ GHE  GIV+ 
Sbjct: 17  VKKPFSIEDVEVAPPKAYEVRIKMVAVGICHTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78  VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
           VG  V+  K GD V +  +   C  C  C +    +C ++ +        DGT       
Sbjct: 76  VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
                 +    +S Y VV E    KI                 T Y   +      PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
             V GLGG+G  AV   KA G    +       K      LGA + +   D        L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI 289
           ++M   G    F +     D    + +   +  G  V+VG P      PAS N+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNL 301

>pdb|1HTB|A Chain A, Crystallization Of Human Beta3 Alcohol Dehydrogenase (10 MgML) IN 100 MM SODIUM PHOSPHATE (PH 7.5), 7.5 MM NAD+ And 1 Mm 4-Iodopyrazole At 25 C Length = 374

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 105/294 (35%), Gaps = 34/294 (11%)
Query: 21  VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
           V  P+S     V      +V I +   G+C  D     + +  +  P++ GHE  GIV+ 
Sbjct: 17  VKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78  VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
           VG  V+  K GD V +  +   C  C  C +    +C ++ +        DGT       
Sbjct: 76  VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
                 +    +S Y VV E    KI                 T Y   +      PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
             V GLGG+G  AV   KA G    +       K      LGA + +   D        L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI 289
           ++M   G    F +     D    + +   +  G  V+VG P      PAS N+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNL 301

>pdb|1HDX|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 71/294 (24%), Positives = 105/294 (35%), Gaps = 34/294 (11%)
Query: 21  VLSPYSFNRRAVGSD---DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKE 77
           V  P+S     V      +V I +   G+C  D     + +  +  P++ GHE  GIV+ 
Sbjct: 17  VKKPFSIEDVEVAPPKAYEVRIKMVAVGICRTD-DHVVSGNLVTPLPVILGHEAAGIVES 75
Query: 78  VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT------- 129
           VG  V+  K GD V +  +   C  C  C +    +C ++ +        DGT       
Sbjct: 76  VGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLGNPRGTLQDGTRRFTCRG 134
Query: 130 ------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKS 183
                 +    +S Y VV E    KI                 T Y   +      PG +
Sbjct: 135 KPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGST 194
Query: 184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------L 235
             V GLGG+G  AV   KA G    +       K      LGA + +   D        L
Sbjct: 195 CAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVL 254
Query: 236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI 289
           ++M   G    F +     D    + +   +  G  V+VG P      PAS N+
Sbjct: 255 KEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP------PASQNL 301

>pdb|1HDZ|A Chain A, Three-Dimensional Structures Of Three Human Alcohol Dehydrogenase Variants: Correlations With Their Functional Differences Length = 374

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 62/251 (24%), Positives = 90/251 (35%), Gaps = 30/251 (11%)
Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VY 119
           +  P++ GHE  GIV+ VG  V+  K GD V +  +   C  C  C +    +C ++ + 
Sbjct: 59  TPLPVILGHEAAGIVESVGEGVTTVKPGDKV-IPLFTPQCGKCRVCKNPESNYCLKNDLG 117
Query: 120 TFNAIDADGT-------------ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGI 166
                  DGT             +    +S Y VV E    KI                 
Sbjct: 118 NPRGTLQDGTRRFTCRGKPIHHFLGTSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFS 177
Query: 167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA 226
           T Y   +      PG +  V GLGG+G  AV   KA G    +       K      LGA
Sbjct: 178 TGYGSAVNVAKVTPGSTCAVFGLGGVGLSAVMGCKAAGAARIIAVDINKDKFAKAKELGA 237
Query: 227 DKFVVSSD--------LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS 278
            + +   D        L++M   G    F +     D    + +   +  G  V+VG P 
Sbjct: 238 TECINPQDYKKPIQEVLKEMTDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP- 295
Query: 279 KVKFSPASLNI 289
                PAS N+
Sbjct: 296 -----PASQNL 301

>pdb|1HT0|A Chain A, Human Gamma-2 Alcohol Dehydrogense Length = 374

Iteration: 1
 Score = 49.3 bits (116), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 101/279 (36%), Gaps = 28/279 (10%)
Query: 24  PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           P+S     V    + +V I +   G+C +D     + +  +  P++ GHE  GIV+ VG 
Sbjct: 20  PFSIEEVEVAPPKAHEVRIKMVAAGICRSDE-HVVSGNLVTPLPVILGHEAAGIVESVGE 78
Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT---------- 129
            V+  K GD V +  +   C  C  C +    +C ++ +        DGT          
Sbjct: 79  GVTTVKPGDKV-IPLFTPQCGKCRICKNPESNYCLKNDLGNPRGTLQDGTRRFTCSGKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
              +    +S Y VV E    KI                 T Y   ++     PG +  V
Sbjct: 138 HHFVGVSTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTPGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
            GLGG+G   V   KA G    +       K      LGA + +   D        L++M
Sbjct: 198 FGLGGVGLSVVMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277
              G    F +     D    + +   +  G  V+VG P
Sbjct: 258 TDGGVDFSFEV-IGQLDTMMASLLCCHEACGTSVIVGVP 295

>pdb|1HSO|A Chain A, Human Alpha Alcohol Dehydrogenase (Adh1a) Length = 374

Iteration: 1
 Score = 47.8 bits (112), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 66/279 (23%), Positives = 98/279 (35%), Gaps = 28/279 (10%)
Query: 24  PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           P+S     V    + +V I +   G+C  D          +  P++ GHE  GIV+ VG 
Sbjct: 20  PFSIEEVEVAPPKAHEVRIKMVAVGICGTDDHVVSGTM-VTPLPVILGHEAAGIVESVGE 78
Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT---------- 129
            V+  K GD V +   +  C  C  C +    +C ++ V        DGT          
Sbjct: 79  GVTTVKPGDKV-IPLAIPQCGKCRICKNPESNYCLKNDVSNPQGTLQDGTSRFTCRRKPI 137
Query: 130 ---ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGV 186
              +    +S Y VV E    KI                 T Y   +      PG +  V
Sbjct: 138 HHFLGISTFSQYTVVDENAVAKIDAASPLEKVCLIGCGFSTGYGSAVNVAKVTPGSTCAV 197
Query: 187 IGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQM 238
            GLGG+G  A+   KA G    +       K      LGA + +   D        L++M
Sbjct: 198 FGLGGVGLSAIMGCKAAGAARIIAVDINKDKFAKAKELGATECINPQDYKKPIQEVLKEM 257
Query: 239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277
              G    F +     D    + +   +  G  V+VG P
Sbjct: 258 TDGGVDFSFEV-IGRLDTMMASLLCCHEACGTSVIVGVP 295

>pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351

Iteration: 1
 Score = 46.2 bits (108), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 77/320 (24%), Positives = 131/320 (40%), Gaps = 68/320 (21%)
Query: 36  DVSITITHCGVCYADVIWTRNKHGD-SKYPLVP---GHEIVGIVKEVGHNVSRFKVGDHV 91
            V I +  CGV   + + T  + G  S+ PL+P   G ++ G+++ VG N S FK GD V
Sbjct: 59  QVLIKVHACGV---NPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGDRV 115
Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                                      +T + I        GGY+ Y +  +   YK+  
Sbjct: 116 ---------------------------FTSSTIS-------GGYAEYALAADHTVYKLPE 141
Query: 152 DYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL 210
                          T Y  ++     + G+S+ V G  GG+G  A +  +A+GL   +L
Sbjct: 142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLK--IL 199
Query: 211 STSTSKKEEALSLL-GADKFVVSSDLEQM----KALG-KSLDFIIDTASGDHPFDAYMSL 264
            T+ +++ + + L  GA +     ++  +    K +G K +D II+  +  +     +SL
Sbjct: 200 GTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSL 258
Query: 265 LKVAGVYVLVGFPSKVKFSP------ASLNIGGT---KDTQEMLEYCAAHKIYPQI---- 311
           L   G  ++VG    ++ +P       S  IG T      +E  +Y AA +   +I    
Sbjct: 259 LSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLK 318
Query: 312 ----ETIPIENVNEALERLI 327
                  P+E V EA E +I
Sbjct: 319 PVIGSQYPLEKVAEAHENII 338

>pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 53/207 (25%), Positives = 77/207 (37%), Gaps = 41/207 (19%)
Query: 21  VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP---GHEIVGIVKE 77
           VL    F   A G   V +     G+ + D   T  + G    P +P   G E  G+V+ 
Sbjct: 15  VLEYVDFEPEAPGPQAVVVRNKAIGLNFID---TYYRSGLYPAPFLPSGLGAEGAGVVEA 71
Query: 78  VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSS 137
           VG  V+RFKVGD V  GT                                G +  G YS 
Sbjct: 72  VGDEVTRFKVGDRVAYGT--------------------------------GPL--GAYSE 97
Query: 138 YIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGK-SLGVIGLGGLGHMA 196
             V+ E    K+A+             G+TV   + +    +PG+  L     GG+G +A
Sbjct: 98  VHVLPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLA 157
Query: 197 VKFGKAFGLNVTVLSTSTSKKEEALSL 223
            ++ KA G  +    +S  K   A +L
Sbjct: 158 CQWAKALGAKLIGTVSSPEKAAHAKAL 184

>pdb|1EE2|A Chain A, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 100/279 (35%), Gaps = 29/279 (10%)
Query: 24  PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           P+S     V    + +V I +   G+C +D          +  P++ GHE  GIV+ +G 
Sbjct: 20  PFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGE 78
Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT----------- 129
            V+  + GD V +  ++  C  C  C       C +++        DGT           
Sbjct: 79  GVTTVRPGDKV-IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH 137
Query: 130 --ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVI 187
             +    +S Y VV E    KI                 T Y   ++      G +  V 
Sbjct: 138 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVF 197
Query: 188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQMK 239
           GLGG+G   +   KA G    +       K      +GA + V   D        L +M 
Sbjct: 198 GLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMS 257
Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP 277
             G  +DF  +         A +S  + A GV V+VG P
Sbjct: 258 NGG--VDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVP 294

>pdb|1EE2|B Chain B, The Structure Of Steroid-Active Alcohol Dehydrogenase At 1.54 A Resolution Length = 373

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 65/279 (23%), Positives = 100/279 (35%), Gaps = 29/279 (10%)
Query: 24  PYSFNRRAVG---SDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           P+S     V    + +V I +   G+C +D          +  P++ GHE  GIV+ +G 
Sbjct: 20  PFSIEEVEVAPPKAHEVRIKMVAAGICRSDDHVVSGTL-VAPLPVIAGHEAAGIVESIGE 78
Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT----------- 129
            V+  + GD V +  ++  C  C  C       C +++        DGT           
Sbjct: 79  GVTTVRPGDKV-IPLFIPQCGKCSVCKHPEGNLCLKNLSMPRGTMQDGTSRFTCRGKPIH 137
Query: 130 --ITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMRHKMNQPGKSLGVI 187
             +    +S Y VV E    KI                 T Y   ++      G +  V 
Sbjct: 138 HFLGTSTFSQYTVVDEISVAKIDAASPLEKVCLVGCGFSTGYGSAVKVAKVTQGSTCAVF 197
Query: 188 GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--------LEQMK 239
           GLGG+G   +   KA G    +       K      +GA + V   D        L +M 
Sbjct: 198 GLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMS 257
Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP 277
             G  +DF  +         A +S  + A GV V+VG P
Sbjct: 258 NGG--VDFSFEVIGRLDTMVAALSCCQEAYGVSVIVGVP 294

>pdb|3TQH|A Chain A, Structure Of The Quinone Oxidoreductase From Coxiella Burnetii Length = 321

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 25/91 (27%), Positives = 48/91 (52%), Gaps = 2/91 (2%)
Query: 165 GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL 224
           G+T    + + ++ Q    L   G GG+GH+A++  K  G   TV++T++ +    L  L
Sbjct: 138 GLTALQALNQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKG--TTVITTASKRNHAFLKAL 195
Query: 225 GADKFVVSSDLEQMKALGKSLDFIIDTASGD 255
           GA++ +   + + + A+   +D +ID   GD
Sbjct: 196 GAEQCINYHEEDFLLAISTPVDAVIDLVGGD 226

>pdb|1KOL|A Chain A, Crystal Structure Of Formaldehyde Dehydrogenase Length = 398

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 77/329 (23%), Positives = 125/329 (37%), Gaps = 45/329 (13%)
Query: 37  VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96
           V + +    +C +D    R +   ++  LV GHEI G V E G +V   ++GD V V   
Sbjct: 36  VILKVVSTNICGSDQHMVRGRT-TAQVGLVLGHEITGEVIEKGRDVENLQIGDLVSVPFN 94
Query: 97  V--NSCRDCEYCNDG--LEVHCARSVYTFNAID-ADGTITKGGYSSYIVV-HERYCYKIA 150
           V    CR C+  + G  L V+ AR+   +  +D  D T   GG + Y++V +  +     
Sbjct: 95  VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWT---GGQAEYVLVPYADFNLLKL 151
Query: 151 NDYXXXXXXXXXXXGITVYTPMMRHKMNQ----PGKSLGVIGLGGLGHMA---------- 196
            D             ++   P   H        PG ++ V G G +G  A          
Sbjct: 152 PDRDKAMEKIRDLTCLSDILPTGYHGAVTAGVGPGSTVYVAGAGPVGLAAAASARLLGAA 211
Query: 197 -----------VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL 245
                      +   KA G  +  LS  T   E+  +LLG  +   + D    +A G   
Sbjct: 212 VVIVGDLNPARLAHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGH 271
Query: 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK-VKFSPASLNIG---GTKDTQEMLEY 301
               + A  + P     SL++V  V   +G P   V   P +++     G+   +  L +
Sbjct: 272 ----EGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGW 327
Query: 302 CAAHKIYPQIETIPIENVNEALERLIKRD 330
             +H  +      P+   N AL + I  D
Sbjct: 328 AKSHSFH--TGQTPVMKYNRALMQAIMWD 354

>pdb|2VN8|A Chain A, Crystal Structure Of Human Reticulon 4 Interacting Protein 1 In Complex With Nadph Length = 375

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 74/320 (23%), Positives = 118/320 (36%), Gaps = 80/320 (25%)
Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
           ++PL  G ++ G+V E G +V  FK GD                     EV  A   +  
Sbjct: 93  EFPLTLGRDVSGVVMECGLDVKYFKPGD---------------------EVWAAVPPW-- 129
Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYXXXXXXXXXXXGITVYTPMMR----HKM 177
                     +G  S ++VV                        +T ++ + +    +  
Sbjct: 130 ---------KQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDK 180
Query: 178 NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV---VSS 233
           N  GK + ++G  GG+G  A++  KA+  +VT + +  +   E +  LGAD  +     S
Sbjct: 181 NCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVCSQDA--SELVRKLGADDVIDYKSGS 238
Query: 234 DLEQMKALGKSLDFIIDTASGD---------------------HPFDAYMSLLKVA---- 268
             EQ+K+L K  DFI+D   G                       PF   M  L +A    
Sbjct: 239 VEEQLKSL-KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGML 297
Query: 269 ------GVYVLVGFPSKVKFSPASLNIGGT--KDTQEMLEYCAAHKIYPQIE-TIPIENV 319
                 G   L  F   V +  A     G    D  E+++   A KI P IE T P   V
Sbjct: 298 QTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVD---AGKIRPVIEQTFPFSKV 354
Query: 320 NEALERLIKRDVKYRFVIDI 339
            EA  ++ +   + + VI++
Sbjct: 355 PEAFLKVERGHARGKTVINV 374

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	344
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	0.0
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	0.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	0.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	0.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	1e-179
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	1e-132
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	1e-132
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	1e-128
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	5e-77
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	2e-74
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	2e-72
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	3e-70
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	2e-44
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	2e-43
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	3e-40
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	1e-39
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	2e-39
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	1e-37
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	2e-37
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	8e-37
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	1e-36
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	6e-35
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	1e-33
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	3e-33
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	4e-33
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	1e-32
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	1e-31
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	2e-31
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	3e-31
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	4e-31
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	8e-31
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	3e-30
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	4e-30
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	6e-30
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	6e-28
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	7e-28
4eye_A	342	Probable oxidoreductase; structural genomics, niai	1e-27
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	8e-27
3gms_A	340	Putative NADPH:quinone reductase; structural genom	1e-26
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	4e-26
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	5e-26
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	7e-26
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	8e-26
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	9e-25
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	7e-24
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	2e-21
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	8e-21
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	9e-21
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	1e-20
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	3e-20
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	2e-18
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	2e-17
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	2e-17
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	5e-17
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	1e-16
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	5e-16
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	5e-15
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	2e-14
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	3e-14
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	6e-14
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	1e-11
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	2e-10
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	5e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-04
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	8e-06
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	9e-06
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	7e-05
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	1e-04
3evt_A	324	Phosphoglycerate dehydrogenase; structural genomic	2e-04

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* Length = 366

 Score =  543 bits (1402), Expect = 0.0
 Identities = 180/354 (50%), Positives = 231/354 (65%), Gaps = 11/354 (3%)

Query: 2   TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS 61
             E       GWAARD SG LSP++F+RRA G +DV   + +CGVC++D+   +N  G S
Sbjct: 9   PEEEHPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFS 68

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
            YPLVPGHEIVG V EVG  V +  VGD VGVG  V +C  CE C + LE +C + + T+
Sbjct: 69  MYPLVPGHEIVGEVTEVGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTY 128

Query: 122 NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG 181
            +I  DGTIT GGYS+++V +ERY  +  ++ PL   APLLCAGITVY+P+    +++PG
Sbjct: 129 ASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAGITVYSPLKYFGLDEPG 188

Query: 182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL 241
           K +G++GLGGLGH+AVKF KAFG  VTV+STS SKKEEAL   GAD F+VS D EQM+A 
Sbjct: 189 KHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAA 248

Query: 242 GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK-VKFSPASL----------NIG 290
             +LD IIDT S  HP      LLK  G  +LVG P K ++    SL           IG
Sbjct: 249 AGTLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIG 308

Query: 291 GTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
           G K+TQEM+++ A H I   IE I  + +N A+ERL K DV+YRFVID+ N+L 
Sbjct: 309 GMKETQEMIDFAAKHNITADIEVISTDYLNTAMERLAKNDVRYRFVIDVGNTLA 362

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* Length = 357

 Score =  543 bits (1401), Expect = 0.0
 Identities = 159/353 (45%), Positives = 223/353 (63%), Gaps = 11/353 (3%)

Query: 1   MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD 60
           M    A +   GWAARDPSG+LSPY++  R  G +DV+I I  CG+C+ D+  T+N  G 
Sbjct: 1   MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGM 60

Query: 61  SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT 120
           S YP+VPGHE+VG V EVG +VS+F VGD VGVG  V  C  C  C   LE +C + +++
Sbjct: 61  SNYPMVPGHEVVGEVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWS 120

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
           +N +  +G  T+GG++   VVH+++  KI     +  AAPLLCAG+TVY+P+    + QP
Sbjct: 121 YNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAPLLCAGVTVYSPLSHFGLKQP 180

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           G   G++GLGG+GHM VK  KA G +VTV+S+S  K+EEAL  LGAD +V+ SD  +M  
Sbjct: 181 GLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMSE 240

Query: 241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK-VKFSPASL----------NI 289
           L  SLD++IDT    H  + Y+SLLK+ G  +L+G  +  ++F    L           I
Sbjct: 241 LADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPLLMLGRKVITGSFI 300

Query: 290 GGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
           G  K+T+EMLE+C    +   IE + ++ VN A ERL K DV+YRFV+D++ S
Sbjct: 301 GSMKETEEMLEFCKEKGLSSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGS 353

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 369

 Score =  518 bits (1337), Expect = 0.0
 Identities = 155/357 (43%), Positives = 203/357 (56%), Gaps = 17/357 (4%)

Query: 2   TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS 61
             + A        A      L P    RR  G +DV I I +CGVC++D+   R++   +
Sbjct: 15  LYKKAGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGT 74

Query: 62  KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF 121
            YP VPGHEIVG V  VG  V ++  GD VGVG  V+SC+ CE C DGLE +C     T+
Sbjct: 75  VYPCVPGHEIVGRVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTY 134

Query: 122 NAIDADGT-ITKGGYSSYIVVHERYCYKI-ANDYPLALAAPLLCAGITVYTPMMRHKMNQ 179
           N+   D    T GGYS  IVVHERY  +I      LA  APLLCAGIT Y+P+   +   
Sbjct: 135 NSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLCAGITTYSPLRHWQA-G 193

Query: 180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK 239
           PGK +GV+G+GGLGHM +K   A G +V   +TS +K+E A + LGAD+ V S + ++M 
Sbjct: 194 PGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAAKA-LGADEVVNSRNADEMA 252

Query: 240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN----------- 288
           A  KS DFI++T +  H  D + +LLK  G   LVG P+    SP   N           
Sbjct: 253 AHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGS 312

Query: 289 -IGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSLK 344
            IGG  +TQEML++CA H I   IE I  + +NEA ER+++ DVKYRFVID   +L 
Sbjct: 313 MIGGIPETQEMLDFCAEHGIVADIEMIRADQINEAYERMLRGDVKYRFVIDN-RTLT 368

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} Length = 348

 Score =  506 bits (1305), Expect = 0.0
 Identities = 133/348 (38%), Positives = 189/348 (54%), Gaps = 23/348 (6%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEI 71
           G+A         P+ F+R AVG  DV I I + G+C++D+    ++  +  YP++PGHEI
Sbjct: 7   GFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEI 66

Query: 72  VGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID--ADGT 129
            GI+KEVG  V +FK+GD VGVG +VNSC+ C+ C +  E  C + V+T++ +D   D  
Sbjct: 67  AGIIKEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNE 126

Query: 130 ITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL 189
              GGYS+ IVV E Y   +  + PL   APLLCAGIT Y+P+   K+   G  +GV G 
Sbjct: 127 PHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAGITTYSPLKFSKVT-KGTKVGVAGF 185

Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           GGLG MAVK+  A G  V+V + +  KK++ALS +G   F         K   + LDFII
Sbjct: 186 GGLGSMAVKYAVAMGAEVSVFARNEHKKQDALS-MGVKHFYTD-----PKQCKEELDFII 239

Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPASL-----------NIGGTKDT 295
            T    +    Y+ LL   G   LVG P        S                IGG K+T
Sbjct: 240 STIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKET 299

Query: 296 QEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL 343
           QEM+++   H IYP+I+ I  ++++ A   L     K+R+VID++ S 
Sbjct: 300 QEMVDFSIKHNIYPEIDLILGKDIDTAYHNLTHGKAKFRYVIDMKKSF 347

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A Length = 360

 Score =  500 bits (1290), Expect = e-179
 Identities = 116/357 (32%), Positives = 182/357 (50%), Gaps = 24/357 (6%)

Query: 1   MTSETASKDCLGWAARDPSGV--LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH 58
           M+     +   G A +            ++ +     D+ I I  CGVC +D+       
Sbjct: 1   MSYPEKFE---GIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHW 57

Query: 59  GDSKYPLVPGHEIVGIVKEVGHNV-SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARS 117
           G+ K PLV GHEIVG V ++G    S  KVG  VGVG  V SC +C+ C +  E +C + 
Sbjct: 58  GNMKMPLVVGHEIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKF 117

Query: 118 VYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM 177
           V T++    DG +++GGY++Y+ VHE +   I  + P  LAAPLLC G+TVY+P++R+  
Sbjct: 118 VTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLLCGGLTVYSPLVRNGC 177

Query: 178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-E 236
             PGK +G++GLGG+G M     KA G    V+S S+ K+E+A+  +GAD ++ + +  +
Sbjct: 178 -GPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDAMK-MGADHYIATLEEGD 235

Query: 237 QMKALGKSLDFIIDTASGDHPFD--AYMSLLKVAGVYVLVGFPSK-VKFSPASL------ 287
             +    + D I+  AS     D       +KV G  V +  P +    S          
Sbjct: 236 WGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVS 295

Query: 288 ----NIGGTKDTQEMLEYCAAHKIYPQIETIPI--ENVNEALERLIKRDVKYRFVID 338
                +G  K+  ++L+  +   I   +ET+P+    V+EA ER+ K DV+YRF + 
Sbjct: 296 ISYSALGSIKELNQLLKLVSEKDIKIWVETLPVGEAGVHEAFERMEKGDVRYRFTLV 352

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347

 Score =  379 bits (977), Expect = e-132
 Identities = 91/347 (26%), Positives = 147/347 (42%), Gaps = 28/347 (8%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHE 70
           G    +  G L           ++++ I + + GVC+ D+           K PLV GHE
Sbjct: 8   GVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHE 67

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
             G+V  +G NV  +K+GD+ G+     SC  CEYC  G E +C  +  +       G  
Sbjct: 68  GAGVVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYT 120

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL- 189
             G +  Y          I     LA  AP+LCAGITVY  +    +   G  + + G  
Sbjct: 121 HDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITVYKALKSANL-MAGHWVAISGAA 179

Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-----LEQMKALGKS 244
           GGLG +AV++ KA G  V  +     K+E   S +G + F+  +         +KA    
Sbjct: 180 GGLGSLAVQYAKAMGYRVLGIDGGEGKEELFRS-IGGEVFIDFTKEKDIVGAVLKATDGG 238

Query: 245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN------------IGGT 292
              +I+ +  +   +A    ++  G  VLVG P+  K      N            +G  
Sbjct: 239 AHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNR 298

Query: 293 KDTQEMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI 339
            DT+E L++ A   +   I+ + +  + E  E++ K  +  R+V+D 
Sbjct: 299 ADTREALDFFARGLVKSPIKVVGLSTLPEIYEKMEKGQIVGRYVVDT 345

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A Length = 339

 Score =  378 bits (973), Expect = e-132
 Identities = 105/345 (30%), Positives = 157/345 (45%), Gaps = 24/345 (6%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHE 70
                     L      +  +   +V + I  CGVC+ D+           K PL+PGHE
Sbjct: 3   AAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHE 62

Query: 71  IVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI 130
            VGIV+EVG  V+  KVGD VG+    ++C  C+YC  G E  C             G  
Sbjct: 63  GVGIVEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYS 115

Query: 131 TKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLG 190
             GGY+ Y      Y  KI ++     AAP+ CAG+T Y   ++    +PG+ + + G+G
Sbjct: 116 VDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTYKA-LKVTGAKPGEWVAIYGIG 174

Query: 191 GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKALGKSLDF 247
           GLGH+AV++ KA GLNV  +     K E A   LGAD  V        + MK     +  
Sbjct: 175 GLGHVAVQYAKAMGLNVVAVDIGDEKLELAKE-LGADLVVNPLKEDAAKFMKEKVGGVHA 233

Query: 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK-VKFSPASL----------NIGGTKDTQ 296
            + TA     F +  + ++  G  VLVG P + +                  +G  KD Q
Sbjct: 234 AVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQ 293

Query: 297 EMLEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQN 341
           E L++ A  K+   IE  P+E +NE  +R++K  +  R V+ +++
Sbjct: 294 EALQFAAEGKVKTIIEVQPLEKINEVFDRMLKGQINGRVVLTLED 338

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* Length = 340

 Score =  368 bits (948), Expect = e-128
 Identities = 95/341 (27%), Positives = 145/341 (42%), Gaps = 24/341 (7%)

Query: 14  AARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK-HGDSKYPLVPGHEIV 72
             R     L+         G   V + I   GVC+ D+             P +PGHE V
Sbjct: 7   VVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGV 66

Query: 73  GIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITK 132
           G V  VG  VSR K GD VGV    ++C  CE+C  G E  C +   T       G    
Sbjct: 67  GYVSAVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVN 119

Query: 133 GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGL 192
           GGY  Y+V    Y   + +       AP+LCAG+TVY   ++    +PG+ + + G+GGL
Sbjct: 120 GGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTVYKG-LKVTDTRPGQWVVISGIGGL 178

Query: 193 GHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKALGKSLDFII 249
           GH+AV++ +A GL V  +    +K   A   LGA+  V + D      ++        ++
Sbjct: 179 GHVAVQYARAMGLRVAAVDIDDAKLNLARR-LGAEVAVNARDTDPAAWLQKEIGGAHGVL 237

Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASL----------NIGGTKDTQEM 298
            TA     F   + +++  G   L G P          +           +G   D QE 
Sbjct: 238 VTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQES 297

Query: 299 LEYCAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI 339
           L++ A   +   + T  +++VN+   RL +  V+ R V+D 
Sbjct: 298 LDFAAHGDVKATVSTAKLDDVNDVFGRLREGKVEGRVVLDF 338

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 Length = 359

 Score =  239 bits (612), Expect = 5e-77
 Identities = 85/331 (25%), Positives = 141/331 (42%), Gaps = 39/331 (11%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGD------SKYPLVPGHEIVGIVKEVGHNVSRF 85
           G  DV + I   GVC+ D+ +      G        K P   GHE VG ++EV   V   
Sbjct: 40  GRFDVIVRIAGAGVCHTDLHLV----QGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGL 95

Query: 86  KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY 145
           + GD V +     +   C  C  G ++HC    +        G    GG++ ++    R 
Sbjct: 96  EKGDPVILH-PAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRS 147

Query: 146 CYKIANDYP---LALAAPLLCAGITVYTPMMRHKMN-QPGKSLGVIGLGGLGHMAVKFGK 201
             K+  D     L   APL  AGIT Y  + +      PG  + ++G+GGLGH+AV+  K
Sbjct: 148 VIKLPKDISREKLVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLK 207

Query: 202 AFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKAL--GKSLDFIIDTASGDH 256
                 V  L     K + A   LGAD  V +    ++Q+  L  G+ ++  +D      
Sbjct: 208 VMTPATVIALDVKEEKLKLAER-LGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQA 266

Query: 257 PFDAYMSLLKVAGVYVLVGFPSKVKFSPASL---------NIGGT-KDTQEMLEYCAAHK 306
             D    LL   G  ++VG+  +++F    +         ++ G   +  E++      K
Sbjct: 267 TVDYTPYLLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 326

Query: 307 IYPQIETIPIENVNEALERLIKRDVKYRFVI 337
           +  +++   ++ +N+ LERL K +V  R V+
Sbjct: 327 VRVEVDIHKLDEINDVLERLEKGEVLGRAVL 357

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} Length = 344

 Score =  232 bits (594), Expect = 2e-74
 Identities = 85/330 (25%), Positives = 130/330 (39%), Gaps = 39/330 (11%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGD-----SKYPLVPGHEIVGIVKEVGHNVSRFK 86
             ++V I I   GVC  D+ +W     G       + P++ GHE  G + EVG  +++ K
Sbjct: 27  QGEEVLIRIGGAGVCRTDLRVW----KGVEAKQGFRLPIILGHENAGTIVEVG-ELAKVK 81

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            GD+V V         C YC +G    C   +         G  T GG+S Y++V     
Sbjct: 82  KGDNVVVY-ATWGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRW 133

Query: 147 YKIANDYPLALAAPLLCAGITVYT---PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
               N      AAPL  AG T        +          + V G+GGL    ++  KA 
Sbjct: 134 LVKLNSLSPVEAAPLADAGTTSMGAIRQALPFISKFAEPVVIVNGIGGLAVYTIQILKAL 193

Query: 204 GLNVTV--LSTSTSKKEEALSLLGADKFVVSSDL-EQMKAL--GKSLDFIIDTASGDHPF 258
             N+T+  +S S   ++ AL  LGAD      D    +  L  G      ID    +   
Sbjct: 194 MKNITIVGISRSKKHRDFALE-LGADYVSEMKDAESLINKLTDGLGASIAIDLVGTEETT 252

Query: 259 DAYMSLLKVAGVYVLVG-FPSKVKFSPASL---------NIGGT-KDTQEMLEYCAAHKI 307
                LL   G  +LVG    +V                +  G+  D ++++    + KI
Sbjct: 253 YNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGKI 312

Query: 308 YPQIETIPIENVNEALERLIKRDVKYRFVI 337
            P I  +P++++N+A   L +  V  R VI
Sbjct: 313 KPYIIKVPLDDINKAFTNLDEGRVDGRQVI 342

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347

 Score =  227 bits (580), Expect = 2e-72
 Identities = 90/332 (27%), Positives = 136/332 (40%), Gaps = 37/332 (11%)

Query: 33  GSDDVSITITHCGVCYADV-IW-------TRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR 84
               V I +   GVC++DV +           +    K P+  GHEI G ++EVG  V  
Sbjct: 24  KGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVVG 83

Query: 85  FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER 144
           +  GD V V        +C YC  G E  C    +        G    G Y+ Y++V   
Sbjct: 84  YSKGDLVAVN-PWQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHY 135

Query: 145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKA- 202
                        AAPL C+GIT Y   +R     P K+L V+G  GGLG MAV+  KA 
Sbjct: 136 KYMYKLRRLNAVEAAPLTCSGITTYR-AVRKASLDPTKTLLVVGAGGGLGTMAVQIAKAV 194

Query: 203 FGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGDHP 257
            G  +  +       E A    GAD  + +S  + +  +      K +D +ID  + +  
Sbjct: 195 SGATIIGVDVREEAVEAAKR-AGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKT 253

Query: 258 FDAYMSLLKVAGVYVLVG-FPSKVKFSPASL---------NIGGT-KDTQEMLEYCAAHK 306
              Y   L   G YV+VG F + + +    +         ++ G   D   ++    A K
Sbjct: 254 LSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 313

Query: 307 IYPQI-ETIPIENVNEALERLIKRDVKYRFVI 337
           + P I +T+ +E  NEA++ L       R V+
Sbjct: 314 VKPMITKTMKLEEANEAIDNLENFKAIGRQVL 345

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345

 Score =  221 bits (566), Expect = 3e-70
 Identities = 82/324 (25%), Positives = 130/324 (40%), Gaps = 23/324 (7%)

Query: 33  GSDDVSITITHCGVCYAD--VIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
           G  ++ + +T  G+C++D  V+           PL  GHE VG V E+G  V+ F VGD 
Sbjct: 24  GPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVGDA 83

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
           V V      C  C  C  G E +C R+      I   G  + G  + Y++V         
Sbjct: 84  VAV-YGPWGCGACHACARGRENYCTRAADL--GITPPGLGSPGSMAEYMIVDSARHLVPI 140

Query: 151 NDYPLALAAPLLCAGITVYTPMMRHKMN-QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVT 208
            D     AAPL  AG+T Y  + R      PG +  VIG+GGLGH+ ++  +A     V 
Sbjct: 141 GDLDPVAAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVI 200

Query: 209 VLSTSTSKKEEALSLLGADKFVVSSD--LEQMKAL--GKSLDFIIDTASGDHPFDAYMSL 264
            +     +   A   +GAD  V S     + ++ L  G+    + D        D    +
Sbjct: 201 AVDLDDDRLALARE-VGADAAVKSGAGAADAIRELTGGQGATAVFDFVGAQSTIDTAQQV 259

Query: 265 LKVAGVYVLVGFPS-KVKFSPASL---------NIGGT-KDTQEMLEYCAAHKIYPQIET 313
           + V G   +VG  +         +            GT  +  E++    A ++    ET
Sbjct: 260 VAVDGHISVVGIHAGAHAKVGFFMIPFGASVVTPYWGTRSELMEVVALARAGRLDIHTET 319

Query: 314 IPIENVNEALERLIKRDVKYRFVI 337
             ++    A  RL +  ++ R V+
Sbjct: 320 FTLDEGPAAYRRLREGSIRGRGVV 343

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 Length = 380

 Score =  155 bits (394), Expect = 2e-44
 Identities = 76/341 (22%), Positives = 135/341 (39%), Gaps = 37/341 (10%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS-----RFK 86
           +    + + I   GVC +DV   R +      P++ GHE  G V EV            K
Sbjct: 40  IPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNGELLK 99

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHC--ARSVYTFNAIDADGTITKGGYSSYIVVH-E 143
            GD + V     +C +C +C    E +    R VY  N   ++    +G YSS+IV+  E
Sbjct: 100 PGDLI-VWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPE 158

Query: 144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
               K++    L + A  +C+G T Y     +  +  GK++ + G G LG   V   ++ 
Sbjct: 159 TDVLKVSEKDDLDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSL 218

Query: 204 G-LNVTVLSTSTSKKEEALSLLGADKFVVSSD------LEQMKAL--GKSLDFIIDTASG 254
           G  NV V++ S ++ + A   +GAD  +   +       + +  +  G+  DFI++    
Sbjct: 219 GAENVIVIAGSPNRLKLAEE-IGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGD 277

Query: 255 DHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNI-----------GGTKDTQEMLE 300
                    LL+  G Y + G       V F      +             T    + + 
Sbjct: 278 SRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVS 337

Query: 301 YCAAHKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVID 338
             + +       I   +P++  N+ALE +  R+   + ++ 
Sbjct: 338 ITSRNYQLLSKLITHRLPLKEANKALELMESREA-LKVILY 377

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343

 Score =  151 bits (385), Expect = 2e-43
 Identities = 75/331 (22%), Positives = 124/331 (37%), Gaps = 30/331 (9%)

Query: 21  VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVG 79
           VL          G  +V + +    + + DV   +         P V G +  G+V  VG
Sbjct: 14  VLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVG 73

Query: 80  HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYI 139
             V  F  GD V V     SC  CE C  G +  C R           G    G Y+ Y+
Sbjct: 74  PGVEGFAPGDEV-VINPGLSCGRCERCLAGEDNLCPRY-------QILGEHRHGTYAEYV 125

Query: 140 VVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVK 198
           V+ E        +     AA +    +T +  ++     +PG  + V+    G+   A++
Sbjct: 126 VLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQ 185

Query: 199 FGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTAS 253
             K FG  V   + S  K   A + LGAD+ V  +     ++++ L  GK  D ++D   
Sbjct: 186 IAKLFGARVIATAGSEDKLRRAKA-LGADETVNYTHPDWPKEVRRLTGGKGADKVVDHTG 244

Query: 254 GDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPAS-----LNIGGT-----KDTQEMLEY 301
             + F+  +      G   + G  S  +     A      L+I G+          +L +
Sbjct: 245 ALY-FEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRF 303

Query: 302 CAAHKIYPQI-ETIPIENVNEALERLIKRDV 331
               K+ P + + +P+E   E    L +R V
Sbjct: 304 VEEGKLKPVVGQVLPLEAAAEGHRLLEERRV 334

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363

 Score =  144 bits (365), Expect = 3e-40
 Identities = 73/315 (23%), Positives = 125/315 (39%), Gaps = 32/315 (10%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
             G  D+ +      + Y D +      G D  +P VP  ++ G+V+ VG +V+RF+ GD
Sbjct: 50  EAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVTRFRPGD 109

Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
            V + T+     D      G             A +  G    G  S Y+V+ E +    
Sbjct: 110 RV-ISTFAPGWLDGLRPGTGRT----------PAYETLGGAHPGVLSEYVVLPEGWFVAA 158

Query: 150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
                 A A+ L CAG+T +  ++     + G  + V G GG+    ++  KA G  V V
Sbjct: 159 PKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIV 218

Query: 210 LSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFDAYMSL 264
            S+S  K + A + LGAD  +   +   +E++ AL   +  D I++ A G       +  
Sbjct: 219 TSSSREKLDRAFA-LGADHGINRLEEDWVERVYALTGDRGADHILEIAGGAG-LGQSLKA 276

Query: 265 LKVAGVYVLVGFPS--KVKFSPASL----------NIGGTKDTQEMLEYCAAHKIYPQI- 311
           +   G   ++G     +V      L          ++G  +  ++++       + P I 
Sbjct: 277 VAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLGLKPVID 336

Query: 312 ETIPIENVNEALERL 326
                  V EAL  L
Sbjct: 337 MRYKFTEVPEALAHL 351

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* Length = 366

 Score =  142 bits (360), Expect = 1e-39
 Identities = 66/340 (19%), Positives = 105/340 (30%), Gaps = 51/340 (15%)

Query: 33  GSDDVSITITHCGVCYADV-----IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
               + I   + G+C AD        T +     K  LV GHE +G+V+E  H    F  
Sbjct: 25  SYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEESYHG---FSQ 81

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           GD V        C  C  C  G    C    +    I        G    +     +Y  
Sbjct: 82  GDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEAGI----HKMDGFMREWWYDDPKYLV 136

Query: 148 KIANDYP--LALAAPLLCA---------GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMA 196
           KI         LA PL                             + + V+G G +G + 
Sbjct: 137 KIPKSIEDIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLF 196

Query: 197 VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKALGKSLDFIIDTASG 254
               + +GL V + +     + E   +        +S    +++K      D IID A+G
Sbjct: 197 TLLFRTYGLEVWMANRREPTEVEQTVIEETKTNYYNSSNGYDKLKDSVGKFDVIID-ATG 255

Query: 255 DHP--FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNI---------------GGTKDTQE 297
                    + LL   GV  L GF +          +               G     Q+
Sbjct: 256 ADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVNGQKPHFQQ 315

Query: 298 MLEYCAAHKIYPQIE-------TIPIENVNEALERLIKRD 330
            + + A+ K             T+ I +  E L+ L +++
Sbjct: 316 AVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKE 355

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370

 Score =  141 bits (359), Expect = 2e-39
 Identities = 66/328 (20%), Positives = 116/328 (35%), Gaps = 43/328 (13%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD 89
             G DD+ + +  CG+C  D  +   +    S  P+  GHE  GIV E G  V     G 
Sbjct: 44  EPGPDDLLVKVEACGICGTDRHLL--HGEFPSTPPVTLGHEFCGIVVEAGSAVRDIAPGA 101

Query: 90  HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKI 149
            +     + SC  C  C  G    C         I  D     GG++ Y++V  +  ++I
Sbjct: 102 RITGDPNI-SCGRCPQCQAGRVNLCRN--LRAIGIHRD-----GGFAEYVLVPRKQAFEI 153

Query: 150 ANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-L 205
                    A   PL C    ++   +     + G ++ ++G G +G + V+  +  G  
Sbjct: 154 PLTLDPVHGAFCEPLACC---LHG--VDLSGIKAGSTVAILGGGVIGLLTVQLARLAGAT 208

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL----GKSLDFIIDTASGDHPF 258
            V + +   +K+  A   +GA   V  S    +E +          +D +I+ A      
Sbjct: 209 TVILSTRQATKRRLAEE-VGATATVDPSAGDVVEAIAGPVGLVPGGVDVVIECAGVAETV 267

Query: 259 DAYMSLLKVAGVYVLVGFPSK---VKFSPAS-----LNIGGT----KDTQEMLEYCAAHK 306
                L K  G  V++G   +   V+  P       L + G+       +   +  A   
Sbjct: 268 KQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGA 327

Query: 307 I--YPQI-ETIPIENVNEALERLIKRDV 331
           I     I   I ++   + +        
Sbjct: 328 IEIDRMISRRISLDEAPDVISNPAAAGE 355

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447

 Score =  139 bits (351), Expect = 1e-37
 Identities = 65/386 (16%), Positives = 112/386 (29%), Gaps = 68/386 (17%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKY-------- 63
           G A +D    L         +  D+V + +    + Y  V W+        +        
Sbjct: 40  GVADKDVRKSLRLGEVPMPELAPDEVLVAVMASSINYNTV-WSAMFEPIPTFHFLKQNAR 98

Query: 64  -----------PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEV 112
                        V G +  G+V   G  V R+K GDHV V  +     + E    G  +
Sbjct: 99  QGGWATRHDQPYHVLGSDCSGVVVRTGIGVRRWKPGDHVIV--HPAHVDEQEPATHGDGM 156

Query: 113 HCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPM 172
                               GG + Y VV                AA       T Y  +
Sbjct: 157 LGTEQRAWG------FETNFGGLAEYGVVRASQLLPKPAHLTWEEAAVSPLCAGTAYRML 210

Query: 173 MRHKMN--QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF 229
           +  +    + G  + + G  GGLG  A++F K  G     + +S  K+    + LG D  
Sbjct: 211 VSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAVRA-LGCDLV 269

Query: 230 VVSSDLEQMKAL----------------------GKSLDFIIDTASGDHPFDAYMSLLKV 267
           +  ++L     +                      G+  D + +       F   + + + 
Sbjct: 270 INRAELGITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARR 328

Query: 268 AGVYVLVGFPS--KVKFSPASL-----NIGGT-----KDTQEMLEYCAAHKIYPQI-ETI 314
            G  V  G  S     F    L      I G+     ++ Q       +  + P +    
Sbjct: 329 GGTVVTCGSSSGYLHTFDNRYLWMKLKKIVGSHGANHEEQQATNRLFESGAVVPAMSAVY 388

Query: 315 PIENVNEALERLIKRDVKYRFVIDIQ 340
           P+    EA   +       +  +   
Sbjct: 389 PLAEAAEACRVVQTSRQVGKVAVLCM 414

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348

 Score =  136 bits (344), Expect = 2e-37
 Identities = 67/260 (25%), Positives = 107/260 (41%), Gaps = 27/260 (10%)

Query: 32  VGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKVG 88
            G  +V I +    +C  D+ I+  N+   S  K P + GHE+ G V E+G  V   +VG
Sbjct: 27  PGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIEVG 86

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D+V V T++  C  C  C  G    C         +D D     G ++ Y VV  +  +K
Sbjct: 87  DYVSVETHI-VCGKCYACRRGQYHVCQN--TKIFGVDTD-----GVFAEYAVVPAQNIWK 138

Query: 149 IANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG- 204
                P   A    PL  A  TV            GKS+ + G G LG + +   KA G 
Sbjct: 139 NPKSIPPEYATLQEPLGNAVDTVL------AGPISGKSVLITGAGPLGLLGIAVAKASGA 192

Query: 205 LNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFD 259
             V V   S  ++E A   +GAD  +   +   ++++  +  G  +D  ++ +      +
Sbjct: 193 YPVIVSEPSDFRRELAKK-VGADYVINPFEEDVVKEVMDITDGNGVDVFLEFSGAPKALE 251

Query: 260 AYMSLLKVAGVYVLVGFPSK 279
             +  +  AG   L+G    
Sbjct: 252 QGLQAVTPAGRVSLLGLYPG 271

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346

 Score =  134 bits (340), Expect = 8e-37
 Identities = 70/331 (21%), Positives = 124/331 (37%), Gaps = 52/331 (15%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
             D+V + I   G+C +D+    +N      YP+  GHE  G +  VG  V     GD V
Sbjct: 24  HQDEVRVKIASSGLCGSDLPRIFKNGAH--YYPITLGHEFSGYIDAVGSGVDDLHPGDAV 81

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                +  C  C  C  G    CA+  Y F     D     GG++ YIVV  +  + +  
Sbjct: 82  ACVPLL-PCFTCPECLKGFYSQCAK--YDFIGSRRD-----GGFAEYIVVKRKNVFALPT 133

Query: 152 DYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNV 207
           D P+   A   P+      ++            K++ +IG G +G +A++   A G  +V
Sbjct: 134 DMPIEDGAFIEPITVG---LHA--FHLAQGCENKNVIIIGAGTIGLLAIQCAVALGAKSV 188

Query: 208 TVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFDAYM 262
           T +  S+ K   A S  GA +   SS+    +    L   +    I++TA      +  +
Sbjct: 189 TAIDISSEKLALAKS-FGAMQTFNSSEMSAPQMQSVLRELRFNQLILETAGVPQTVELAV 247

Query: 263 SLLKVAGVYVLVGFPSK-VKFSPAS--------LNIGGT----------KDTQEMLEYCA 303
            +        LVG   + +  + A+        L + G+          ++ +       
Sbjct: 248 EIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLT 307

Query: 304 AHKIYPQIE-----TIPIENVNEALERLIKR 329
             K+   +E         E+  +A+  + + 
Sbjct: 308 ERKL--SLEPLIAHRGSFESFAQAVRDIARN 336

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456

 Score =  136 bits (344), Expect = 1e-36
 Identities = 55/366 (15%), Positives = 119/366 (32%), Gaps = 66/366 (18%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKY------------------PLVPGHEIV 72
            +G  +  + +    V Y  V  +  +   +                      V G ++ 
Sbjct: 67  ELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLERYGRVSDLAKRHDLPYHVIGSDLA 126

Query: 73  GIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITK 132
           G+V   G  V+ ++ GD V V   ++   +    ++   +   + ++ F           
Sbjct: 127 GVVLRTGPGVNAWQAGDEV-VAHCLSVELESSDGHNDTMLDPEQRIWGFETNF------- 178

Query: 133 GGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN--QPGKSLGVIGL- 189
           GG +   +V         +      AA       T Y  ++       + G ++ + G  
Sbjct: 179 GGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGAS 238

Query: 190 GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-------------KFVVSSDLE 236
           GGLG  A +F  A G N   + +S  K E   + +GA+             K   + D +
Sbjct: 239 GGLGSYATQFALAGGANPICVVSSPQKAEICRA-MGAEAIIDRNAEGYRFWKDENTQDPK 297

Query: 237 QMKALGKSL---------DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA 285
           + K  GK +         D + +    +  F A + + +  G        S    ++   
Sbjct: 298 EWKRFGKRIRELTGGEDIDIVFEHPGRET-FGASVFVTRKGGTITTCASTSGYMHEYDNR 356

Query: 286 SL----------NIGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYR 334
            L          +    ++  E     A  +I+P + +   +E+  +A   + +   + +
Sbjct: 357 YLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGK 416

Query: 335 FVIDIQ 340
             +   
Sbjct: 417 VGVLCL 422

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357

 Score =  130 bits (328), Expect = 6e-35
 Identities = 63/357 (17%), Positives = 113/357 (31%), Gaps = 70/357 (19%)

Query: 17  DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDS-KYPLVPGHEIVGIV 75
           DP+ V+   +    AV   DV + +    +  +D+   +  +G   + P V G+E V  V
Sbjct: 37  DPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQV 96

Query: 76  KEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGY 135
             VG NV+  K GD V +                                       G +
Sbjct: 97  VAVGSNVTGLKPGDWV-IPANAGL---------------------------------GTW 122

Query: 136 SSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN-QPGKSLGVIGL-GGLG 193
            +  V  E    ++ +D PL  AA L     T Y  M+      QPG S+       G+G
Sbjct: 123 RTEAVFSEEALIQVPSDIPLQSAATLGVNPCTAYR-MLMDFEQLQPGDSVIQNASNSGVG 181

Query: 194 HMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKFVVSSDL---EQMKAL--GKSL 245
              ++   A GL    +       ++       LGA+  +   +L   E           
Sbjct: 182 QAVIQIAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITEEELRRPEMKNFFKDMPQP 241

Query: 246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK--VKFSPASLNIGG------------ 291
              ++   G       +  L   G  V  G  +K  V  S + L                
Sbjct: 242 RLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWK 300

Query: 292 --------TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339
                    +    + +     ++       +P+++   ALE  +K  +  + ++ +
Sbjct: 301 KDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 Length = 352

 Score =  126 bits (318), Expect = 1e-33
 Identities = 83/327 (25%), Positives = 134/327 (40%), Gaps = 41/327 (12%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKV 87
               D+V + + + G+C +DV  +   +  D   K P+V GHE  G V +VG NV   K 
Sbjct: 25  EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKK 84

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           GD V V   V  CR C++C +G    C     TF A   D     G  + Y V    +C+
Sbjct: 85  GDRVAVEPGV-PCRRCQFCKEGKYNLCPD--LTFCATPPDD----GNLARYYVHAADFCH 137

Query: 148 KIANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204
           K+ ++  L   A   PL      V+    R    Q G ++ VIG G +G ++V   KA+G
Sbjct: 138 KLPDNVSLEEGALLEPLSVG---VHA--CRRAGVQLGTTVLVIGAGPIGLVSVLAAKAYG 192

Query: 205 LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---------MKALGKSLDFIIDTASGD 255
             V   + S  + E A +  GAD  +V    ++           A+G   +  ID +  +
Sbjct: 193 AFVVCTARSPRRLEVAKNC-GADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNE 251

Query: 256 HPFDAYMSLLKVAGVYVLVG-FPSKVKFSPAS-----LNIGGT----KDTQEMLEYCAAH 305
                 +++ +  G  +LVG     V     +     ++I        D    LE  A+ 
Sbjct: 252 KCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASG 311

Query: 306 KI--YPQI-ETIPIENVNEALERLIKR 329
           +      +  +  +E   +A E   K+
Sbjct: 312 RCNVKQLVTHSFKLEQTVDAFEAARKK 338

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343

 Score =  124 bits (315), Expect = 3e-33
 Identities = 61/260 (23%), Positives = 101/260 (38%), Gaps = 26/260 (10%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKV 87
             G  ++ + +    +C  D+ IW  +       + PLV GHE  G+V+ VG  V R +V
Sbjct: 22  EPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQV 81

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           GDHV + +++  C  C  C  G    C         +D DG   +     Y+VV     +
Sbjct: 82  GDHVSLESHI-VCHACPACRTGNYHVCLN--TQILGVDRDGGFAE-----YVVVPAENAW 133

Query: 148 KIANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG 204
               D P  +AA   P   A   V+T  +       GKS+ + G G +G MA    +A G
Sbjct: 134 VNPKDLPFEVAAILEPFGNA---VHT--VYAGSGVSGKSVLITGAGPIGLMAAMVVRASG 188

Query: 205 -LNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKALGKSLDFIIDTASGDHP-FD 259
              + V   +  +   A             +       +  G  ++ +++  SG+     
Sbjct: 189 AGPILVSDPNPYRLAFARP-YADRLVNPLEEDLLEVVRRVTGSGVEVLLE-FSGNEAAIH 246

Query: 260 AYMSLLKVAGVYVLVGFPSK 279
             +  L   G   ++G PS 
Sbjct: 247 QGLMALIPGGEARILGIPSD 266

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* Length = 357

 Score =  124 bits (314), Expect = 4e-33
 Identities = 63/346 (18%), Positives = 104/346 (30%), Gaps = 46/346 (13%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKV 87
              S +  +     GVC  D  +      G    +  LV GHE VG+V  V  N +  + 
Sbjct: 22  EPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVGVV--VDPNDTELEE 79

Query: 88  GDHVGVGTYVN-SCRDCEYCNDGLEVHCARSVYTFNAI-DADGTITKGGYSSYIVVHERY 145
           GD V        +    EY            +Y    I  A      G  S +    E+Y
Sbjct: 80  GDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAH-----GYMSEFFTSPEKY 134

Query: 146 CYKIANDYP--LALAAPLLCAGITVY-TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA 202
             +I         L  P+      +      R   +    S  V+G G LG + +   K 
Sbjct: 135 LVRIPRSQAELGFLIEPISITEKALEHAYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKV 194

Query: 203 F--GLNVTVLSTSTSKKEEALSL---LGADKFVVSSD-LEQMKALGKSLDFIIDTASGDH 256
              G           + +  + +   L A         +E +  + + +DFI + A+G  
Sbjct: 195 DDKGYENLYCLGRRDRPDPTIDIIEELDATYVDSRQTPVEDVPDVYEQMDFIYE-ATGFP 253

Query: 257 P-FDAYMSLLKVAGVYVLVGFPSKVKFSPA-----------------SLNIGGTKDTQEM 298
                 +  L   GV  L+G PS   F                    S+N          
Sbjct: 254 KHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHFEAAT 313

Query: 299 LEYCAAHKIYPQ--I-ETIPIENVNEALERLIKRDVKYRFVIDIQN 341
           + +    K + +  +    P+     A +      +K    I+   
Sbjct: 314 VTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD-DTTIKT--AIEFST 356

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 Length = 371

 Score =  123 bits (312), Expect = 1e-32
 Identities = 72/338 (21%), Positives = 127/338 (37%), Gaps = 53/338 (15%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
             D+V + +   G+C+ D+I  R++      P V GHE  GI++ +G NV+  +VGDHV 
Sbjct: 30  QGDEVLVKVVATGMCHTDLI-VRDQKYPVPLPAVLGHEGSGIIEAIGPNVTELQVGDHV- 87

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADGT--ITKGG-------------YS 136
           V +Y   C  C  CN G   +C+      F+  D++G   +                 ++
Sbjct: 88  VLSY-GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFA 146

Query: 137 SYIVVHERYCYKIANDYPLALAAPLLCAGIT-----VYTPMMRHKMNQPGKSLGVIGLGG 191
           +Y +  E    K+  D P+ L  PL C   T     +    +      P  S    G G 
Sbjct: 147 TYALSRENNTVKVTKDVPIELLGPLGCGIQTGAGACINALKVT-----PASSFVTWGAGA 201

Query: 192 LGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL-GKSLD 246
           +G  A+   K  G   +  +    S+ E A  L GA   + S     +  +K +    ++
Sbjct: 202 VGLSALLAAKVCGASIIIAVDIVESRLELAKQL-GATHVINSKTQDPVAAIKEITDGGVN 260

Query: 247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLNI----------GGTK 293
           F +++          +  L + G   +VG P   +  +F    L +          G   
Sbjct: 261 FALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGS 320

Query: 294 ---DTQEMLEYCAAHKIY--PQIETIPIENVNEALERL 326
                 E++      K      ++    + +N+A    
Sbjct: 321 PKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAIDS 358

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* Length = 376

 Score =  121 bits (306), Expect = 1e-31
 Identities = 72/342 (21%), Positives = 123/342 (35%), Gaps = 65/342 (19%)

Query: 37  VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96
           V I +    VC  D+    +    + +P+V GHE  GIV+ VG  V+ FK GD V +  +
Sbjct: 36  VRIQVIATCVCPTDIN-ATDPKKKALFPVVLGHECAGIVESVGPGVTNFKPGDKV-IPFF 93

Query: 97  VNSCRDCEYCNDGLEVHCARSVYTFNAID-----ADGT--ITKGG-----------YSSY 138
              C+ C+ C   L   C +               D T   T  G           +S Y
Sbjct: 94  APQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY 153

Query: 139 IVVHERYCYKIANDYPLALAAPLLCA-----GITVYTPMMRHKMNQPGKSLGVIGLGGLG 193
            VV E    ++ ++  L     + C      G  + T  +      PG +  V GLG +G
Sbjct: 154 TVVSEANLARVDDEANLERVCLIGCGFSSGYGAAINTAKVT-----PGSTCAVFGLGCVG 208

Query: 194 HMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTA 252
             A+   K  G   +  +  +  K  +A + LGA   +   +L++        D I +  
Sbjct: 209 LSAIIGCKIAGASRIIAIDINGEKFPKAKA-LGATDCLNPRELDKPVQ-----DVITELT 262

Query: 253 SG--DHPFD----------AYMSLLKVAGVYVLVGFP-SKVKFSPASL---------NIG 290
           +G  D+  D          A    +   G   +VG    ++      +           G
Sbjct: 263 AGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFG 322

Query: 291 GTK---DTQEMLEYCAAHKIYPQI---ETIPIENVNEALERL 326
           G K       ++      K    +     +P E++N+A++ +
Sbjct: 323 GWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLM 364

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 Length = 374

 Score =  120 bits (304), Expect = 2e-31
 Identities = 80/338 (23%), Positives = 133/338 (39%), Gaps = 51/338 (15%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
            ++++ I I   GVC+ D+           +P+V GHE  GIV+ VG  V+ F+ G+ V 
Sbjct: 32  HANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTEFQPGEKV- 90

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNA-IDADGT--ITKGG-----------YSSY 138
           +  +++ C +C +C       C +     +  + +      T  G           +S Y
Sbjct: 91  IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQY 150

Query: 139 IVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVK 198
            VV++    KI    PL     L C   T +   +     +PG +  V GLG +G  AV 
Sbjct: 151 TVVNQIAVAKIDPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVM 210

Query: 199 FGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG--D 255
              + G   +  +  +  K E+A    GA  FV  +D  +  +       +    +G  D
Sbjct: 211 GCHSAGAKRIIAVDLNPDKFEKAKV-FGATDFVNPNDHSEPIS-----QVLSKMTNGGVD 264

Query: 256 HPFD----------AYMSLLKVAGVYVLVGFPS--KVKFSPASL---------NIGGTK- 293
              +          A  S LK  GV VLVG+     V   P  L           GG K 
Sbjct: 265 FSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG 324

Query: 294 --DTQEMLEYCAAHKIYPQI---ETIPIENVNEALERL 326
                +M++     K+         +P+E+VN+A++ +
Sbjct: 325 KDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLM 362

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A Length = 356

 Score =  120 bits (302), Expect = 3e-31
 Identities = 74/332 (22%), Positives = 124/332 (37%), Gaps = 45/332 (13%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKV 87
             G ++V + +   G+C +DV  W   + G+   K P+V GHE  G V++VG +V   K 
Sbjct: 28  EPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKP 87

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI-DADGTITKGGYSSYIVVHERYC 146
           GD V +        + E+C  G           F A    DG + +     +   +  +C
Sbjct: 88  GDRVAIEPGA-PRENDEFCKMGRYNLSPS--IFFCATPPDDGNLCR-----FYKHNAAFC 139

Query: 147 YKIANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
           YK+ ++      A   PL      ++    R      G  + V G G +G + +   KA 
Sbjct: 140 YKLPDNVTFEEGALIEPLSVG---IHA--CRRGGVTLGHKVLVCGAGPIGMVTLLVAKAM 194

Query: 204 G-LNVTVLSTSTSKKEEALSLLGADKFVVSS--DLEQM-----KALGKSLDFIIDTASGD 255
           G   V V   S ++  +A   +GAD  +  S    +++       LG   +  I+  +G 
Sbjct: 195 GAAQVVVTDLSATRLSKAKE-IGADLVLQISKESPQEIARKVEGQLGCKPEVTIE-CTGA 252

Query: 256 HP-FDAYMSLLKVAGVYVLVG-FPSKVKFSPAS-----LNIGGT----KDTQEMLEYCAA 304
                A +   +  G  VLVG                 ++I G           +   A+
Sbjct: 253 EASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLAS 312

Query: 305 HKI--YPQI-ETIPIENVNEALERLIK-RDVK 332
             +   P +    P+E   EA E   K   +K
Sbjct: 313 KSVNVKPLVTHRFPLEKALEAFETFKKGLGLK 344

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* Length = 373

 Score =  119 bits (301), Expect = 4e-31
 Identities = 78/337 (23%), Positives = 127/337 (37%), Gaps = 56/337 (16%)

Query: 37  VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96
           V I I    VC+ D         +  +P++ GH   GIV+ VG  V++ K GD V +  Y
Sbjct: 34  VRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKLKAGDTV-IPLY 92

Query: 97  VNSCRDCEYCNDGLEVHCARSVYTFNA-IDADGT--ITKGG-----------YSSYIVVH 142
           +  C +C++C +     C +   T    +  DGT   T  G           +S Y VV 
Sbjct: 93  IPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152

Query: 143 ERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKA 202
           +    KI    PL     L C   T Y   +     +PG    V GLGG+G   +   K 
Sbjct: 153 DISVAKIDPLAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKV 212

Query: 203 FG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG--DHPFD 259
            G   +  +  +  K   A    GA + +   D  +        + +I+   G  D+ F+
Sbjct: 213 AGASRIIGVDINKDKFARAKE-FGATECINPQDFSKPIQ-----EVLIEMTDGGVDYSFE 266

Query: 260 ----------AYMSLLKVAGVYVLVGFP---SKVKFSPASL---------NIGGTK---D 294
                     A  +  K  GV V+VG      ++   P  L           GG K    
Sbjct: 267 CIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVES 326

Query: 295 TQEMLEYCAAHKIYPQIE-----TIPIENVNEALERL 326
             +++    + KI  +++      +  + +N+A E +
Sbjct: 327 VPKLVSEYMSKKI--KVDEFVTHNLSFDEINKAFELM 361

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404

 Score =  119 bits (300), Expect = 8e-31
 Identities = 62/346 (17%), Positives = 120/346 (34%), Gaps = 60/346 (17%)

Query: 33  GSDDVSITITHCGVCYADV-IWTRNKHGD------SKYPLVPGHEIVGIVKEVGHNV--- 82
              ++ I +  CG+C +DV +   ++ G       + +P+  GHE  G+V E G      
Sbjct: 54  KPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINR 113

Query: 83  ---SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYI 139
               RF++G+ V     +  C  C  C +G   HC          + D     G ++ Y+
Sbjct: 114 RTNKRFEIGEPVCAEEML-WCGHCRPCAEGFPNHCEN--LNELGFNVD-----GAFAEYV 165

Query: 140 VVHERYCYKI-------ANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGL 189
            V  +Y + +         D      +   P   A       ++R    +PG ++ ++G 
Sbjct: 166 KVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVA---YNAVIVRGGGIRPGDNVVILGG 222

Query: 190 GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GK 243
           G +G  AV   K  G   V +   S  ++  A   LGAD  +  +    +E +     G 
Sbjct: 223 GPIGLAAVAILKHAGASKVILSEPSEVRRNLAKE-LGADHVIDPTKENFVEAVLDYTNGL 281

Query: 244 SLDFIIDTASGDHPFDAYMSLLKVAG-----VYVLVGFPSK-VKFSPAS-----LNIGGT 292
                ++           +  +            +V      +  +          I G+
Sbjct: 282 GAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGS 341

Query: 293 ------KDTQEMLEYCAAH-KIYPQI-ETIPIENVNEALERLIKRD 330
                      ++   A+   +   I +T+ +E + E ++RL    
Sbjct: 342 QGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKRLQTDK 387

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... Length = 374

 Score =  117 bits (295), Expect = 3e-30
 Identities = 77/336 (22%), Positives = 124/336 (36%), Gaps = 47/336 (13%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVG 92
            + +V I +   G+C +D     +    +  P++ GHE  GIV+ +G  V+  + GD V 
Sbjct: 32  KAHEVRIKMVATGICRSDD-HVVSGTLVTPLPVIAGHEAAGIVESIGEGVTTVRPGDKV- 89

Query: 93  VGTYVNSCRDCEYCNDGLEVHCARSVYTFNA-IDADGT--ITKGG-----------YSSY 138
           +  +   C  C  C       C ++  +       DGT   T  G           +S Y
Sbjct: 90  IPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQY 149

Query: 139 IVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVK 198
            VV E    KI    PL     + C   T Y   ++      G +  V GLGG+G   + 
Sbjct: 150 TVVDEISVAKIDAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIM 209

Query: 199 FGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDL-----EQMKAL-GKSLDFIIDT 251
             KA G   +  +  +  K  +A   +GA + V   D      E +  +    +DF  + 
Sbjct: 210 GCKAAGAARIIGVDINKDKFAKAKE-VGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEV 268

Query: 252 A-SGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASL---------NIGGTK---DT 295
               D    A     +  GV V+VG P     +  +P  L           GG K     
Sbjct: 269 IGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFKSKDSV 328

Query: 296 QEMLEYCAAHKIYPQIE-----TIPIENVNEALERL 326
            +++    A K    ++      +P E +NE  + L
Sbjct: 329 PKLVADFMAKKF--ALDPLITHVLPFEKINEGFDLL 362

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* Length = 373

 Score =  116 bits (294), Expect = 4e-30
 Identities = 79/339 (23%), Positives = 132/339 (38%), Gaps = 63/339 (18%)

Query: 37  VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY 96
           V I I   G+C +D      +   SK+P++ GHE VG+V+ +G  V+  K GD V +  +
Sbjct: 37  VRIKILASGICGSDS-SVLKEIIPSKFPVILGHEAVGVVESIGAGVTCVKPGDKV-IPLF 94

Query: 97  VNSCRDCEYCNDGLEVHCARSVYTFNA-IDADGT--ITKGG-----------YSSYIVVH 142
           V  C  C  C       C ++       + AD T   T  G           ++ Y VV 
Sbjct: 95  VPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154

Query: 143 ERYCYKIANDYPLALAAPLLCA-----GITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAV 197
           +    KI    PL  +  + C      G  V T  +      PG +  V GLGG+G  A+
Sbjct: 155 DIAVAKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVT-----PGSTCAVFGLGGVGFSAI 208

Query: 198 KFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-- 254
              KA G   +  + T   K  +A+  LGA + +   D ++        + I +  +G  
Sbjct: 209 VGCKAAGASRIIGVGTHKDKFPKAIE-LGATECLNPKDYDKPIY-----EVICEKTNGGV 262

Query: 255 DHPFD----------AYMSLLKVAGVYVLVGFP---SKVKFSPASLNIGGT--------- 292
           D+  +          A  S    +GV V++G      ++   P  L  G +         
Sbjct: 263 DYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGF 322

Query: 293 --KDTQEMLEYCAAHKIYPQI---ETIPIENVNEALERL 326
             ++   +++     KI         + ++ +N+A E L
Sbjct: 323 KGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELL 361

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315

 Score =  115 bits (290), Expect = 6e-30
 Identities = 39/294 (13%), Positives = 91/294 (30%), Gaps = 63/294 (21%)

Query: 55  RNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114
           +    +     VPG +  G++ +VG  V    +G                          
Sbjct: 50  KANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGR------------------------- 84

Query: 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174
              V    ++   G+     ++ + V++      + ++     AA L C  +T +    +
Sbjct: 85  --RVAYHTSLKRHGS-----FAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAWQAFEK 137

Query: 175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD 234
             +    + + ++G G + ++  +     G  V +   S S  +   +  G     +  +
Sbjct: 138 IPL-TKQREVLIVGFGAVNNLLTQMLNNAGYVVDL--VSASLSQALAAKRGVR--HLYRE 192

Query: 235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPA---SLNIGG 291
             Q   + +    I D  +  +   A +  LK  G  + +         PA   +++   
Sbjct: 193 PSQ---VTQKYFAIFDAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHE 248

Query: 292 ------------------TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERL 326
                              +  + +L   A  K+     +    E + EAL+  
Sbjct: 249 IALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQMIEALDHS 302

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321

 Score =  109 bits (276), Expect = 6e-28
 Identities = 57/330 (17%), Positives = 109/330 (33%), Gaps = 58/330 (17%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRN------KHGDSKYPLVPGHEIVGIVKEVGHNVSR 84
               + + I +    +   D   TRN      K   +  P   G++  G V E+G +V+ 
Sbjct: 30  EYRKNQMLIKVHAASLNPIDY-KTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELGSDVNN 88

Query: 85  FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER 144
             +GD V                                           Y+ Y+     
Sbjct: 89  VNIGDKV---------------------------MGIAGFPDHP----CCYAEYVCASPD 117

Query: 145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAF 203
              +         AA L  AG+T    + + ++ + G  + +    GG+GH+A++  K  
Sbjct: 118 TIIQKLEKLSFLQAASLPTAGLTALQALNQAEV-KQGDVVLIHAGAGGVGHLAIQLAKQK 176

Query: 204 GLNVTVLSTSTSKKEEALSLLGADKFV--VSSDLEQMKALGKSLDFIIDTASGDHPFDAY 261
           G  V   +T++ +    L  LGA++ +     D     A+   +D +ID   GD      
Sbjct: 177 GTTVI--TTASKRNHAFLKALGAEQCINYHEEDFLL--AISTPVDAVIDLVGGDV-GIQS 231

Query: 262 MSLLKVAGVYVLVGFPSKVKFSPASLNIGGT----------KDTQEMLEYCAAHKIYPQI 311
           +  LK  G  V V   +  +    +                ++   + +  +  K+  +I
Sbjct: 232 IDCLKETGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLRIEI 291

Query: 312 -ETIPIENVNEALERLIKRDVKYRFVIDIQ 340
                +     A E L    V+ + V  ++
Sbjct: 292 SRIFQLSEAVTAHELLETGHVRGKLVFKVR 321

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} Length = 363

 Score =  110 bits (278), Expect = 7e-28
 Identities = 57/329 (17%), Positives = 110/329 (33%), Gaps = 45/329 (13%)

Query: 31  AVGSDDVSITITHCGVCYADV-IWTRNKHGDS--KYPLVPGHEIVGIVKEVGHNVSRFKV 87
            +   +V++ +   G+C +DV  W     G    +   V GHE  G V  V  +V   KV
Sbjct: 37  ELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESAGEVIAVHPSVKSIKV 96

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI-DADGTITKGGYSSYIVVHERYC 146
           GD V +   V  C  CE C  G    C R    F +     G + +     Y+     +C
Sbjct: 97  GDRVAIEPQV-ICNACEPCLTGRYNGCER--VDFLSTPPVPGLLRR-----YVNHPAVWC 148

Query: 147 YKIANDYPLALAA---PLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
           +KI  +      A   PL    + +    ++    + G  + + G G +G + +   KA 
Sbjct: 149 HKI-GNMSYENGAMLEPL---SVALAG--LQRAGVRLGDPVLICGAGPIGLITMLCAKAA 202

Query: 204 G-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL---------DFIIDTAS 253
           G   + +      + + A   +  +      +    +   K +            ++   
Sbjct: 203 GACPLVITDIDEGRLKFAKE-ICPEVVTHKVERLSAEESAKKIVESFGGIEPAVALECTG 261

Query: 254 GDHPFDAYMSLLKVAGVYVLVGFPSK---VKFSPAS---LNIGGT----KDTQEMLEYCA 303
            +    A +  +K  G   ++G       + F  AS   +++             +    
Sbjct: 262 VESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRYCNTWPRAIRLVE 321

Query: 304 AHKI--YPQI-ETIPIENVNEALERLIKR 329
              +     +    P+E+  +A E     
Sbjct: 322 NGLVDLTRLVTHRFPLEDALKAFETASDP 350

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342

 Score =  109 bits (276), Expect = 1e-27
 Identities = 64/333 (19%), Positives = 110/333 (33%), Gaps = 77/333 (23%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKY------PLVPGHEIVGIVKEVGHNVSRFK 86
           G + V + +   GVC+ D + T+ +     Y      P VPG E  G+V+      S  K
Sbjct: 47  GPNVVVVDVKAAGVCFPDYLMTKGE-----YQLKMEPPFVPGIETAGVVRSAP-EGSGIK 100

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            GD V                       A                 GGY+  + V     
Sbjct: 101 PGDRV----------------------MA-------------FNFIGGYAERVAVAPSNI 125

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGL 205
                    A A  L+    T+Y    R    + G+++ V+G  GG+G  A++  K  G 
Sbjct: 126 LPTPPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGA 185

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSD--LEQMKAL--GKSLDFIIDTASGDHPFDAY 261
            V     + +   E +  +GAD  +   +   + ++    G  +D ++D   G   FD  
Sbjct: 186 KVIA-VVNRTAATEFVKSVGADIVLPLEEGWAKAVREATGGAGVDMVVDPIGGPA-FDDA 243

Query: 262 MSLLKVAGVYVLVGFPS--KVKFSPASLNIGG-------------------TKDTQEMLE 300
           +  L   G  ++VGF +          L +                      +    + +
Sbjct: 244 VRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEK 303

Query: 301 YCAAHKIYPQI-ETIPIENVNEALERLIKRDVK 332
             A   + P +   IP+    +AL+      V 
Sbjct: 304 LVAE-GMRPPVSARIPLSEGRQALQDFADGKVY 335

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349

 Score =  107 bits (270), Expect = 8e-27
 Identities = 69/354 (19%), Positives = 132/354 (37%), Gaps = 81/354 (22%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
              ++ I +  CG+ + D++  +    +  K PLVPG E  GIV+ +G +V  +++GD V
Sbjct: 29  QDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYEIGDRV 88

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                                  A              +    ++  +     + YKI +
Sbjct: 89  ----------------------MA-------------FVNYNAWAEVVCTPVEFVYKIPD 113

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGLNVTVL 210
           D   + AA      +T Y  +      + G S+ V    GG+G    +       NVTV 
Sbjct: 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVP-NVTVF 172

Query: 211 STSTSKKEEALSLLGADKFVVSSDL-EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVA 268
            T+++ K EA+       F  ++D  +++K +  + +D ++D   GD+     +SLLK  
Sbjct: 173 GTASTFKHEAIKDSVTHLFDRNADYVQEVKRISAEGVDIVLDCLCGDN-TGKGLSLLKPL 231

Query: 269 GVYVLVGFPS-------------KVKFSPASLNIGG------------------------ 291
           G Y+L G  +             K  +    +N                           
Sbjct: 232 GTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAG 291

Query: 292 --TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS 342
                 ++++      KI P +     +E V EA++R+  R    + ++D++ +
Sbjct: 292 LIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340

 Score =  106 bits (268), Expect = 1e-26
 Identities = 52/284 (18%), Positives = 93/284 (32%), Gaps = 48/284 (16%)

Query: 17  DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIV 75
           +P  VL     N   +  ++V + +    +  +D+I     +      P +PG+E VGIV
Sbjct: 15  NPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIV 74

Query: 76  KEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGY 135
           + VG  VSR  +G  V                                        +G +
Sbjct: 75  ENVGAFVSRELIGKRV----------------------LP-------------LRGEGTW 99

Query: 136 SSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGH 194
             Y+     +   I +      AA +    +T +         Q    L V      +GH
Sbjct: 100 QEYVKTSADFVVPIPDSIDDFTAAQMYINPLTAWVTCTETLNLQRNDVLLVNACGSAIGH 159

Query: 195 MAVKFGKAFGLNV--TVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDF 247
           +  +  +     +         +K  E L  LGA   + +S     E +  L  G   D 
Sbjct: 160 LFAQLSQILNFRLIAVT---RNNKHTEELLRLGAAYVIDTSTAPLYETVMELTNGIGADA 216

Query: 248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGG 291
            ID+  G    +     L+  G ++ +G  S ++ + A +    
Sbjct: 217 AIDSIGGPD-GNELAFSLRPNGHFLTIGLLSGIQVNWAEIVTKA 259

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375

 Score =  106 bits (266), Expect = 4e-26
 Identities = 67/324 (20%), Positives = 109/324 (33%), Gaps = 74/324 (22%)

Query: 55  RNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114
             K    ++PL  G ++ G+V E G +V  FK GD                         
Sbjct: 86  HVKIKGEEFPLTLGRDVSGVVMECGLDVKYFKPGDE------------------------ 121

Query: 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMR 174
              V+        GT      S ++VV                AA L    +T ++ + +
Sbjct: 122 ---VWAAVPPWKQGT-----LSEFVVVSGNEVSHKPKSLTHTQAASLPYVALTAWSAINK 173

Query: 175 H----KMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF 229
                  N  GK + ++G  GG+G  A++  KA+  +VT     +    E +  LGAD  
Sbjct: 174 VGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTA--VCSQDASELVRKLGADDV 231

Query: 230 V--VSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVA--GVYVLVGFPSKVKFSPA 285
           +   S  +E+     K  DFI+D   G          LK      YV +  P  +     
Sbjct: 232 IDYKSGSVEEQLKSLKPFDFILDNV-GGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRL 290

Query: 286 SLNIGGTKDT-----------------------------QEMLEYCAAHKIYPQI-ETIP 315
            +  G  +                                ++ E   A KI P I +T P
Sbjct: 291 GIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFP 350

Query: 316 IENVNEALERLIKRDVKYRFVIDI 339
              V EA  ++ +   + + VI++
Sbjct: 351 FSKVPEAFLKVERGHARGKTVINV 374

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343

 Score =  105 bits (264), Expect = 5e-26
 Identities = 67/329 (20%), Positives = 104/329 (31%), Gaps = 66/329 (20%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRN---KHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV 87
                 V + I   G    D    R     H     P + G ++ G V  VG  V  F+V
Sbjct: 29  QPAPGQVLVQIEASGTNPLDA-KIRAGEAPHAQQPLPAILGMDLAGTVVAVGPEVDSFRV 87

Query: 88  GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCY 147
           GD V                         +              +G ++ +  V  R   
Sbjct: 88  GDAV----------------------FGLT--------GGVGGLQGTHAQFAAVDARLLA 117

Query: 148 KIANDYPLALAA--PLLCAGITVYTPMMRHKMNQPGKSLGVI-GLGGLGHMAVKFGKAFG 204
                  +  A+  PL    IT +  ++     Q G+++ +  G GG+GH+A++   A G
Sbjct: 118 SKPAALTMRQASVLPL--VFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARG 175

Query: 205 LNVTVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKALGKSLDFIIDTASGDHPFDAY 261
               V +T+     E +  LGA          D       G+  D + DT  G    DA 
Sbjct: 176 --ARVFATARGSDLEYVRDLGATPIDASREPEDYAAEHTAGQGFDLVYDTLGGPV-LDAS 232

Query: 262 MSLLKVAGVYVLVGFPSKVKFSPAS---LNIGGT------------KDTQEMLEYCA--- 303
            S +K  G  V        K +P S       G                 EML       
Sbjct: 233 FSAVKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALV 292

Query: 304 -AHKIYPQI--ETIPIENVNEALERLIKR 329
              K+ P++   T  I  +  A + ++ R
Sbjct: 293 QTGKLAPRLDPRTFSIAEIGSAYDAVLGR 321

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346

 Score =  105 bits (263), Expect = 7e-26
 Identities = 74/301 (24%), Positives = 119/301 (39%), Gaps = 74/301 (24%)

Query: 64  PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNA 123
           P V G + +G+V+ VG+ V+ F  GD V                             + +
Sbjct: 60  PRVLGFDAIGVVESVGNEVTMFNQGDIV-----------------------------YYS 90

Query: 124 IDADGTITKGGYSSYIVVHERYCYKI-AN-DYPLALAAPLLCAGITVYT------PMMRH 175
              D     G  + Y +++ER   K   N     A++ PL   GIT Y        + R+
Sbjct: 91  GSPDQN---GSNAEYQLINERLVAKAPKNISAEQAVSLPL--TGITAYETLFDVFGISRN 145

Query: 176 KMNQPGKSLGVI-GLGGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKFV--V 231
           +    GK+L +I G GG+G +A +  KA+GL   V++T S ++  E    +GAD  +   
Sbjct: 146 RNENEGKTLLIINGAGGVGSIATQIAKAYGL--RVITTASRNETIEWTKKMGADIVLNHK 203

Query: 232 SSDLEQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVL-VGFPSKVKFSPA---S 286
            S L Q K  G + +D++  T + D  +D  + L+K  G     V F +    +     S
Sbjct: 204 ESLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALKPKS 263

Query: 287 LNIGG----------TKDTQ---EMLEYCA----AHKIYPQI----ETIPIENVNEALER 325
           L+             T D     E LE        +   P      E +  EN+ +A + 
Sbjct: 264 LSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQI 323

Query: 326 L 326
           L
Sbjct: 324 L 324

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364

 Score =  105 bits (263), Expect = 8e-26
 Identities = 53/371 (14%), Positives = 105/371 (28%), Gaps = 97/371 (26%)

Query: 17  DPSGVLS--PYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK----------HGDSKYP 64
           +P  VL    +  +   +  ++V +      V  +D+   +             G ++  
Sbjct: 14  EPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPA 73

Query: 65  LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI 124
              G+E +  V +VG NVS  + GD V + ++VN                          
Sbjct: 74  APCGNEGLFEVIKVGSNVSSLEAGDWV-IPSHVNF------------------------- 107

Query: 125 DADGTITKGGYSSYIVVHERYCYKIAN-----------DYPLALAAPLLCAGITVYTPMM 173
                   G + ++ + ++    K+ N              +   A +    +T Y  M+
Sbjct: 108 --------GTWRTHALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYL-ML 158

Query: 174 RHKMN-QPGKSLGVI--GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD 227
            H +   PGK   +   G   +G  A + GK    N   +       +E ++    LGA 
Sbjct: 159 THYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLKELGAT 218

Query: 228 KFVVSSDL----------EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP 277
           + +               E +K  G      ++   G          L   G+ +  G  
Sbjct: 219 QVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGM 277

Query: 278 SK--VKFSPASLNIGG-------------------TKDTQEMLEYCAAHKIYPQI-ETIP 315
           S   V    +                         T    +++ +    K+         
Sbjct: 278 SFQPVTIPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETL 337

Query: 316 IENVNEALERL 326
            +      E  
Sbjct: 338 YDGTKPLHELY 348

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351

 Score =  101 bits (255), Expect = 9e-25
 Identities = 63/320 (19%), Positives = 114/320 (35%), Gaps = 62/320 (19%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
               V I +  CGV   +       +      P  PG ++ G+++ VG N S FK GD  
Sbjct: 56  KDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASAFKKGD-- 113

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                               V  +             +   GGY+ Y +  +   YK+  
Sbjct: 114 -------------------RVFTS-------------STISGGYAEYALAADHTVYKLPE 141

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVL 210
                  A +     T Y  ++     + G+S+ V G  GG+G  A +  +A+G  + +L
Sbjct: 142 KLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYG--LKIL 199

Query: 211 ST-STSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFDAYMSL 264
            T  T + ++ +   GA +     +   ++++K     K +D II+  +  +     +SL
Sbjct: 200 GTAGTEEGQKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVN-LSKDLSL 258

Query: 265 LKVAGVYVLVGFPSKVKFSPASLNIGGTKDT----------------QEMLEYCAAHKIY 308
           L   G  ++VG    ++ +P       +                     +        + 
Sbjct: 259 LSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLK 318

Query: 309 PQI-ETIPIENVNEALERLI 327
           P I    P+E V EA E +I
Sbjct: 319 PVIGSQYPLEKVAEAHENII 338

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349

 Score = 99.6 bits (249), Expect = 7e-24
 Identities = 39/275 (14%), Positives = 76/275 (27%), Gaps = 43/275 (15%)

Query: 12  GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHE 70
           G A       L        A G   V I +    +  +DV + + ++G         G E
Sbjct: 27  GSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGRPAGFE 86

Query: 71  IVGIVKEVGHNV-SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT 129
            VG +   G    ++  VG  V                                  A G 
Sbjct: 87  GVGTIVAGGDEPYAKSLVGKRV--------------------------------AFATGL 114

Query: 130 ITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG- 188
              G ++ Y V     C  + +       A ++   +T        K  +  K+  +   
Sbjct: 115 SNWGSWAEYAVAEAAACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVKQ-EGEKAFVMTAG 173

Query: 189 LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GK 243
              L  + +   K  G    V      ++   L  +GA   +          ++ +   +
Sbjct: 174 ASQLCKLIIGLAKEEGFRPIVT-VRRDEQIALLKDIGAAHVLNEKAPDFEATLREVMKAE 232

Query: 244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS 278
                +D  +G     A  + +     +++ G   
Sbjct: 233 QPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLD 266

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353

 Score = 92.7 bits (231), Expect = 2e-21
 Identities = 63/331 (19%), Positives = 108/331 (32%), Gaps = 77/331 (23%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKH----GDSKYPLVPGHEIVGIVKEVGHNVSRFK 86
             G  +V +     GV   D+   +  +      S    + G E+ G +  VG  VS + 
Sbjct: 52  VAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASP---ILGLELSGEIVGVGPGVSGYA 108

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
           VGD V                      C                  G Y+ Y ++     
Sbjct: 109 VGDKV----------------------CG-------------LANGGAYAEYCLLPAGQI 133

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGL 205
                 Y    AA L     TV+  + +      G+S+ +  G  G+G  A++  +AFG 
Sbjct: 134 LPFPKGYDAVKAAALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGA 193

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL-GKSLDFIIDTASGDHPFDAY 261
            V   +  ++ K EA   LGA + +          +KA  G+ +D I+D     + F+  
Sbjct: 194 EVYA-TAGSTGKCEACERLGAKRGINYRSEDFAAVIKAETGQGVDIILDMIGAAY-FERN 251

Query: 262 MSLLKVAGVYVLVGFPSKVKFSPASLNIG----------GT---------------KDTQ 296
           ++ L   G   ++ F          +N+           G+                   
Sbjct: 252 IASLAKDGCLSIIAFLGGAV--AEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLS 309

Query: 297 EMLEYCAAHKIYPQI-ETIPIENVNEALERL 326
           E+     A  + P I +    E+V +A   L
Sbjct: 310 EVWPLLEAGTVAPVIHKVFAFEDVADAHRLL 340

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302

 Score = 90.3 bits (225), Expect = 8e-21
 Identities = 56/334 (16%), Positives = 106/334 (31%), Gaps = 82/334 (24%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSKY------PLVPGHEIVGIVKEVGHNVSRFK 86
              +V + +   G+ +AD +          Y      P +PG E+VG+V           
Sbjct: 24  EEGEVVLRVEAVGLNFADHLMRLGA-----YLTRLHPPFIPGMEVVGVV----------- 67

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            G                          A              + +GG +  + V +   
Sbjct: 68  EGRRY----------------------AA-------------LVPQGGLAERVAVPKGAL 92

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGL 205
             +        AA    + +T Y  + R +  +PG+ + V    G LG  AV+  +A GL
Sbjct: 93  LPLPEGLSPEEAAAFPVSFLTAYLALKRAQA-RPGEKVLVQAAAGALGTAAVQVARAMGL 151

Query: 206 NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLL 265
            V   + S  +K      LGA++    +++ +       LD +++   G    +  + LL
Sbjct: 152 RVLA-AASRPEKLALPLALGAEEAATYAEVPERAKAWGGLDLVLEVR-GKE-VEESLGLL 208

Query: 266 KVAGVYVLVGFPS----KVKFSPA---SLNIGGT------------KDTQEMLEYCAAHK 306
              G  V +G        +        +L + G             ++    L      +
Sbjct: 209 AHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 268

Query: 307 IYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI 339
           + P +    P      A   L+ R    + V+ +
Sbjct: 269 LRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371

 Score = 90.9 bits (226), Expect = 9e-21
 Identities = 39/252 (15%), Positives = 71/252 (28%), Gaps = 47/252 (18%)

Query: 59  GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV 118
             +      G +  G V  VG +V+  +VGD V                           
Sbjct: 58  QFATPWAFLGTDYAGTVVAVGSDVTHIQVGDRV--------------------------- 90

Query: 119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178
           Y         T  +G +S Y V   R   KI        AA L     T    M    + 
Sbjct: 91  YGAQNEMCPRTPDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALPAGISTAGLAMKLLGLP 150

Query: 179 QPGKSLGVI-------------GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG 225
            P  S                 G      + ++  +  G     ++T +    +     G
Sbjct: 151 LPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGY--IPIATCSPHNFDLAKSRG 208

Query: 226 ADKFV--VSSDLEQM--KALGKSLDFIIDTASGDHPFDA-YMSLLKVAGVYVLVGFPSKV 280
           A++     + +L Q        +L + +D  +        + ++ +  G YV +    + 
Sbjct: 209 AEEVFDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEH 268

Query: 281 KFSPASLNIGGT 292
             +   +    T
Sbjct: 269 AATRKMVTTDWT 280

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362

 Score = 90.8 bits (226), Expect = 1e-20
 Identities = 62/342 (18%), Positives = 116/342 (33%), Gaps = 82/342 (23%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDS-KYPLVPGHEIVGIVKEVGHNVS-RFKVGDH 90
           G  D+ +     GV  +D+ ++  ++  S K P   G E +G V  +G + S R+ VG  
Sbjct: 52  GDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSASARYTVGQA 111

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
           V                                      +  G ++ Y VV       + 
Sbjct: 112 VA------------------------------------YMAPGSFAEYTVVPASIATPVP 135

Query: 151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTV 209
           +  P  L   +  +G T Y  +        GK + V    GG G  A++  K    +V +
Sbjct: 136 SVKPEYLTLLV--SGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHV-I 192

Query: 210 LSTSTSKKEEALSLLGADKFVV--SSDL-EQMKAL-GKSLDFIIDTASGDHPFDAYMSLL 265
            + S+ +K   L  LG D+ +   +  +   +K    + +D + ++  G   FD  +  L
Sbjct: 193 GTCSSDEKSAFLKSLGCDRPINYKTEPVGTVLKQEYPEGVDVVYESVGGAM-FDLAVDAL 251

Query: 266 KVAGVYVLVGF-----------PSKVKFSPASL-----NIGGT----------KDTQEML 299
              G  +++GF           P K    PA L     ++ G                +L
Sbjct: 252 ATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLL 311

Query: 300 EYCAAHKIYPQI---------ETIPIENVNEALERLIKRDVK 332
           E C +  +  ++             +E++  A+  +      
Sbjct: 312 EMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNT 353

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363

 Score = 89.7 bits (223), Expect = 3e-20
 Identities = 51/242 (21%), Positives = 87/242 (35%), Gaps = 43/242 (17%)

Query: 55  RNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHC 114
           R+   D     V G++  GIV  VG +V+ F+ GD V                       
Sbjct: 73  RSTPPDGTDWKVIGYDAAGIVSAVGPDVTLFRPGDEV----------------------- 109

Query: 115 ARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY----- 169
                 F A         G  + + +V ER   +       A AA L    IT +     
Sbjct: 110 ------FYAGSIIRP---GTNAEFHLVDERIVGRKPKTLDWAEAAALPLTSITAWEAFFD 160

Query: 170 TPMMRHKMNQPGKSLGVI-GLGGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGAD 227
              +   +     ++ ++ G GG+G +AV+  +    ++TV++T S  + +E +  LGA 
Sbjct: 161 RLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRT-DLTVIATASRPETQEWVKSLGAH 219

Query: 228 KFV--VSSDLEQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP 284
             +        ++ ALG  +  F+  T   D        L+   G + L+  PS      
Sbjct: 220 HVIDHSKPLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIML 279

Query: 285 AS 286
             
Sbjct: 280 FK 281

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354

 Score = 83.8 bits (208), Expect = 2e-18
 Identities = 55/329 (16%), Positives = 105/329 (31%), Gaps = 72/329 (21%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNV-SRFKVGDH 90
           G  +V + +    +  AD++  + ++        + G E  G V E+G      +K+GD 
Sbjct: 48  GEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQGHWKIGDT 107

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIA 150
                                   A              +  GG + Y+ V E     I 
Sbjct: 108 A----------------------MA-------------LLPGGGQAQYVTVPEGLLMPIP 132

Query: 151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGLNVTV 209
               L  AA +  A +T +  +      Q G  + +  GL G+G  A++  +  G    V
Sbjct: 133 EGLTLTQAAAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLV 192

Query: 210 LSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPFDAYMSL 264
            +  + KK +    LGA            E       G  ++ I+D   G + ++  ++ 
Sbjct: 193 -TAGSQKKLQMAEKLGAAAGFNYKKEDFSEATLKFTKGAGVNLILDCIGGSY-WEKNVNC 250

Query: 265 LKVAGVYVLVGFPS--KVKFSPAS------LNIGGT--------------KDTQE----M 298
           L + G +VL G      +     S       ++  +                  E     
Sbjct: 251 LALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPH 310

Query: 299 LEYCAAHKIYPQI-ETIPIENVNEALERL 326
                  ++ P +    P+  + EA + +
Sbjct: 311 FSTEGPQRLLPVLDRIYPVTEIQEAHKYM 339

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 73/339 (21%), Positives = 117/339 (34%), Gaps = 68/339 (20%)

Query: 21  VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           VL    F   A G   V +     G+ + D  +    +     P   G E  G+V+ VG 
Sbjct: 15  VLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGD 74

Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIV 140
            V+RFKVGD V             Y    L                      G YS   V
Sbjct: 75  EVTRFKVGDRVA------------YGTGPL----------------------GAYSEVHV 100

Query: 141 VHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKF 199
           + E    K+A+      AA L+  G+TV   + +    +PG+ +      GG+G +A ++
Sbjct: 101 LPEANLVKLADSVSFEQAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQW 160

Query: 200 GKAFGLNV--TVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTA 252
            KA G  +  TV   S+ +K      LGA + +  S     +++  L  GK    + D  
Sbjct: 161 AKALGAKLIGTV---SSPEKAAHAKALGAWETIDYSHEDVAKRVLELTDGKKCPVVYDGV 217

Query: 253 SGDHPFDAYMSLLKVAGVYVLVGFPS-KVK-FSPASLNIGG------------TKDTQEM 298
             D  +   +  +   G+ V  G  S  V   +   L                  + Q +
Sbjct: 218 GQDT-WLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNL 276

Query: 299 LEYC-------AAHKIYPQI-ETIPIENVNEALERLIKR 329
                      A+ K+     E   +++  +A   L  R
Sbjct: 277 QTMADELFDMLASGKLKVDGIEQYALKDAAKAQIELSAR 315

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327

 Score = 80.7 bits (200), Expect = 2e-17
 Identities = 55/266 (20%), Positives = 94/266 (35%), Gaps = 46/266 (17%)

Query: 21  VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           VL    F       +++ +     G+ + D       +     P   G E  GIV +VG 
Sbjct: 15  VLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGS 74

Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIV 140
            V   K GD V             Y    L                      G YSS   
Sbjct: 75  GVKHIKAGDRVV------------YAQSAL----------------------GAYSSVHN 100

Query: 141 VHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKF 199
           +       +        AA     G+TVY  + +    +P +        GG+G +A ++
Sbjct: 101 IIADKAAILPAAISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQW 160

Query: 200 GKAFGLNV--TVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTA 252
            KA G  +  TV    T++K ++    GA + +   +   +E++K +  GK +  + D+ 
Sbjct: 161 AKALGAKLIGTV---GTAQKAQSALKAGAWQVINYREEDLVERLKEITGGKKVRVVYDSV 217

Query: 253 SGDHPFDAYMSLLKVAGVYVLVGFPS 278
             D  ++  +  L+  G+ V  G  S
Sbjct: 218 GRDT-WERSLDCLQRRGLMVSFGNSS 242

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A Length = 352

 Score = 79.9 bits (198), Expect = 5e-17
 Identities = 57/316 (18%), Positives = 104/316 (32%), Gaps = 59/316 (18%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
            G  D  +       C +D+          ++ ++ GHE VG V EVG  V  FK GD V
Sbjct: 22  PGPFDAIVRPLAVAPCTSDIHTVFEGAIGERHNMILGHEAVGEVVEVGSEVKDFKPGDRV 81

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVY---TFNAIDADGTITKGGYSSYIVVH--ERYC 146
            V   +           G   H    +      N  D       G +  +  V+  +   
Sbjct: 82  -VVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKD-------GVFGEFFHVNDADMNL 133

Query: 147 YKIANDYPLALAAPL-----------LCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
             +  + PL  A  +             A I            + G ++ VIG+G +G M
Sbjct: 134 AHLPKEIPLEAAVMIPDMMTTGFHGAELANI------------KLGDTVCVIGIGPVGLM 181

Query: 196 AVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFII 249
           +V      G   +  + +     + AL   GA   +   +   +EQ+     GK +D ++
Sbjct: 182 SVAGANHLGAGRIFAVGSRKHCCDIALE-YGATDIINYKNGDIVEQILKATDGKGVDKVV 240

Query: 250 DTASGDHPFDAYMSLLKVAGVYVLVGFPSK-----VKFSPASLNIG-----------GTK 293
                 H F   + ++K       V +  +     +  S   + +G           G  
Sbjct: 241 IAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRL 300

Query: 294 DTQEMLEYCAAHKIYP 309
             + +++     ++ P
Sbjct: 301 RMERLIDLVFYKRVDP 316

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333

 Score = 78.8 bits (195), Expect = 1e-16
 Identities = 59/260 (22%), Positives = 92/260 (35%), Gaps = 53/260 (20%)

Query: 33  GSDDVSITITHCGVCYADVIWTRN----KHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           G   V +  T  GV + D  + R          + P+V G E   +V+EVG  V+ F VG
Sbjct: 27  GPGQVRLRNTAIGVNFLD-TYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTDFTVG 85

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           + V              C   L                      G YS   +       K
Sbjct: 86  ERVC------------TCLPPL----------------------GAYSQERLYPAEKLIK 111

Query: 149 IAN--DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGL 205
           +    D      A L+  G+T    + +    +PG  + +    GG+GH+ V + +  G 
Sbjct: 112 VPKDLDLDDVHLAGLMLKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGA 171

Query: 206 NV--TVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFIIDTASGDHPF 258
            V  TV   ST +K E    LG    +  S     E ++ +  GK +D + D+   D   
Sbjct: 172 TVIGTV---STEEKAETARKLGCHHTINYSTQDFAEVVREITGGKGVDVVYDSIGKDT-L 227

Query: 259 DAYMSLLKVAGVYVLVGFPS 278
              +  L+  G+    G  S
Sbjct: 228 QKSLDCLRPRGMCAAYGHAS 247

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379

 Score = 77.3 bits (190), Expect = 5e-16
 Identities = 30/244 (12%), Positives = 63/244 (25%), Gaps = 43/244 (17%)

Query: 59  GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV 118
           G     +  G+E  G+V E G + +   +                              V
Sbjct: 86  GRLDASMPVGNEGAGVVVEAGSSPAAQALMGKT--------------------------V 119

Query: 119 YTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN 178
                           YS Y  +    C  +      A  A      +T    +   ++ 
Sbjct: 120 AAIGG---------AMYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMRL- 169

Query: 179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD--- 234
           +   +L        LG M  +     G+ + V      ++ + L   GA     ++    
Sbjct: 170 EGHSALVHTAAASNLGQMLNQICLKDGIKL-VNIVRKQEQADLLKAQGAVHVCNAASPTF 228

Query: 235 LEQMKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGT 292
           ++ +             D   G       ++ ++ A       +      +   + + G 
Sbjct: 229 MQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGG 288

Query: 293 KDTQ 296
            DT 
Sbjct: 289 LDTS 292

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334

 Score = 73.8 bits (182), Expect = 5e-15
 Identities = 66/342 (19%), Positives = 119/342 (34%), Gaps = 74/342 (21%)

Query: 21  VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH 80
           V+    +   ++  +++ I   + GV Y +  + +  +   + P V G E  G V   G 
Sbjct: 22  VIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGK 80

Query: 81  NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIV 140
            V+ F+VGD V                                      I+   ++ Y  
Sbjct: 81  GVTNFEVGDQV------------------------------------AYISNSTFAQYSK 104

Query: 141 VH-ERYCYKI---ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHM 195
           +  +    K+    +D  L L A  L   +T  +        + G  + +    GG+G +
Sbjct: 105 ISSQGPVMKLPKGTSDEELKLYAAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLI 164

Query: 196 AVKFGKAFGLNV--TVLSTSTSKKEEALSLLGADKFVVSSD---LEQMKAL--GKSLDFI 248
             +  K  G +        ST +K +     GA+  + +S    L Q+     GK +D  
Sbjct: 165 LNQLLKMKGAHTIAVA---STDEKLKIAKEYGAEYLINASKEDILRQVLKFTNGKGVDAS 221

Query: 249 IDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KV-KFSPASLNIGG-----------TKDT 295
            D+   D  F+  ++ LK  GV+V  G  S  +  FS   L+                D 
Sbjct: 222 FDSVGKDT-FEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADP 280

Query: 296 QEMLEYC-------AAHKIYPQI-ETIPIENVNEALERLIKR 329
           +E   Y         + K+  +I +T P+ +   A   +  R
Sbjct: 281 EEWKYYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESR 322

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 Length = 398

 Score = 72.3 bits (178), Expect = 2e-14
 Identities = 37/189 (19%), Positives = 64/189 (33%), Gaps = 24/189 (12%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
                 V + +    +C +D          ++  LV GHEI G V E G +V   ++GD 
Sbjct: 30  KKIEHGVILKVVSTNICGSD-QHMVRGRTTAQVGLVLGHEITGEVIEKGRDVENLQIGDL 88

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSS----YIVVH--ER 144
           V    +  +C  C  C +     C           A G +  G ++     Y++V   + 
Sbjct: 89  V-SVPFNVACGRCRSCKEMHTGVCLTVNPARAG-GAYGYVDMGDWTGGQAEYVLVPYADF 146

Query: 145 YCYKIANDYP--LALAAPLLCAGI-------TVYTPMMRHKMNQPGKSLGVIGLGGLGHM 195
              K+ +       +      + I        V   +       PG ++ V G G +G  
Sbjct: 147 NLLKLPDRDKAMEKIRDLTCLSDILPTGYHGAVTAGV------GPGSTVYVAGAGPVGLA 200

Query: 196 AVKFGKAFG 204
           A    +  G
Sbjct: 201 AAASARLLG 209

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795

 Score = 72.8 bits (179), Expect = 3e-14
 Identities = 61/328 (18%), Positives = 108/328 (32%), Gaps = 66/328 (20%)

Query: 22  LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN 81
           L         +G  +V I +   GV + D +     +         G E  G+V E G  
Sbjct: 226 LVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYPGVA---SLGSEGAGVVVETGPG 282

Query: 82  VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV 141
           V+    GD V                                      +    +    V 
Sbjct: 283 VTGLAPGDRVMG------------------------------------MIPKAFGPLAVA 306

Query: 142 HERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI-GLGGLGHMAVKFG 200
             R   +I   +  A AA +    +T Y  ++     +PG+SL V    GG+G  A++  
Sbjct: 307 DHRMVTRIPAGWSFARAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGMAAIQLA 366

Query: 201 KAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL---EQMKAL--GKSLDFIIDTASGD 255
           +  G    V +T++  K +A+  L  +    S      +Q      G+ +D ++++ +G+
Sbjct: 367 RHLGA--EVYATASEDKWQAVE-LSREHLASSRTCDFEQQFLGATGGRGVDVVLNSLAGE 423

Query: 256 HPFDAYMSLLKVAGVYVLVG------------FPSKVKFSPASLNIGGTKDTQEML---- 299
              DA + +L   G ++ +G                V +        G +   EML    
Sbjct: 424 F-ADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELV 482

Query: 300 EYCAAHKIYP-QIETIPIENVNEALERL 326
           E      + P  +    +    EAL  L
Sbjct: 483 ELFEGRVLEPLPVTAWDVRQAPEALRHL 510

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} Length = 398

 Score = 71.1 bits (175), Expect = 6e-14
 Identities = 37/192 (19%), Positives = 59/192 (30%), Gaps = 39/192 (20%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGT 95
            V + +    +C +D               V GHEI G V E G +V    +GD V    
Sbjct: 34  AVILKVVSTNICGSD-QHIYRGRFIVPKGHVLGHEITGEVVEKGSDVELMDIGDLV-SVP 91

Query: 96  YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSS----YIVVHERY----CY 147
           +  +C  C  C +     C  ++   +A          G+S     Y++V   Y      
Sbjct: 92  FNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVP--YADYMLL 149

Query: 148 KIANDYPLALAAPLL---------------CAGITVYTPMMRHKMNQPGKSLGVIGLGGL 192
           K  +          L                AG+            +PG  + + G G +
Sbjct: 150 KFGDKEQAMEKIKDLTLISDILPTGFHGCVSAGV------------KPGSHVYIAGAGPV 197

Query: 193 GHMAVKFGKAFG 204
           G  A    +  G
Sbjct: 198 GRCAAAGARLLG 209

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324

 Score = 63.5 bits (155), Expect = 1e-11
 Identities = 52/330 (15%), Positives = 97/330 (29%), Gaps = 59/330 (17%)

Query: 36  DVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           DV++ +    + Y D +    K      +P++PG +  G V        RF  G  V + 
Sbjct: 29  DVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASED--PRFHAGQEVLLT 86

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
            +            G+                 G    GG +    V   +   +     
Sbjct: 87  GW------------GV-----------------GENHWGGLAERARVKGDWLVALPAGLS 117

Query: 155 LALAAPLLCAGIT----VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVL 210
              A  +  AG T    V          Q G+ +     GG+G  AV      G  V   
Sbjct: 118 SRNAMIIGTAGFTAMLCVMALEDAGIRPQDGEVVVTGASGGVGSTAVALLHKLGYQVAA- 176

Query: 211 STSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL-DFIIDTASGDHPFDAYMSLLKVAG 269
            +        L  LGA++ +   +  + + L K L    IDT          ++ +   G
Sbjct: 177 VSGRESTHGYLKSLGANRILSRDEFAESRPLEKQLWAGAIDTVGDKVLAKV-LAQMNYGG 235

Query: 270 VYVLVGFPSKVKFSPASL--------NIGG---------TKDT--QEMLEYCAAHKIYPQ 310
                G        P ++         + G          +      +++          
Sbjct: 236 CVAACGLAGGFAL-PTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA 294

Query: 311 IETIPIENVNEALERLIKRDVKYRFVIDIQ 340
              I + +  +  + +I   V+ R ++ I+
Sbjct: 295 ATEITLADAPKFADAIINNQVQGRTLVKIK 324

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330

 Score = 60.4 bits (147), Expect = 2e-10
 Identities = 52/228 (22%), Positives = 80/228 (35%), Gaps = 40/228 (17%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
            V I + + G+ Y D +  +      + YPL+ G +  G V        RF  GD V   
Sbjct: 33  GVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSND--PRFAEGDEVIAT 90

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
           +Y             L                 G    GG S Y  V   +   +  +  
Sbjct: 91  SY------------EL-----------------GVSRDGGLSEYASVPGDWLVPLPQNLS 121

Query: 155 LALAAPLLCAGITV---YTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVL 210
           L  A     AG T       + ++ ++    S+ V G  GG+G +AV      G +V   
Sbjct: 122 LKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVA- 180

Query: 211 STSTSKKEEALSLLGADKFVVSSDL--EQMKALGKSL-DFIIDTASGD 255
           ST   +  + L  LGA + +   D+    +KAL K      +D   G 
Sbjct: 181 STGNREAADYLKQLGASEVISREDVYDGTLKALSKQQWQGAVDPVGGK 228

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328

 Score = 58.9 bits (143), Expect = 5e-10
 Identities = 53/228 (23%), Positives = 84/228 (36%), Gaps = 40/228 (17%)

Query: 36  DVSITITHCGVCYADVIWTRNKHGDSK-YPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVG 94
           DV + + +  V Y D + +       K YP VPG ++ G+V    H   RF+ GD V   
Sbjct: 32  DVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSSQH--PRFREGDEVIAT 89

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
            Y             +                 G    GGYS Y  +H  +   +     
Sbjct: 90  GY------------EI-----------------GVTHFGGYSEYARLHGEWLVPLPKGLT 120

Query: 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI----GLGGLGHMAVKFGKAFGLNVTVL 210
           L  A  +  AG T    + R + +      G +      GG+G +AV      G  V   
Sbjct: 121 LKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEA- 179

Query: 211 STSTSKKEEALSLLGADKFVVSSDL--EQMKALGKSL-DFIIDTASGD 255
           ST  + + + L +LGA + +   D+  E+++ L K      +D   G 
Sbjct: 180 STGKAAEHDYLRVLGAKEVLAREDVMAERIRPLDKQRWAAAVDPVGGR 227

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 51.8 bits (123), Expect = 2e-07
 Identities = 60/407 (14%), Positives = 114/407 (28%), Gaps = 120/407 (29%)

Query: 4   ETASKDCLGWAA-------RDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRN 56
           E   +    +         R PS +   Y   R                    D ++  N
Sbjct: 84  EEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQR--------------------DRLYNDN 123

Query: 57  KHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV------GVGTYV---NSCRDCEYCN 107
               +KY  V   +    +++    +   +   +V      G G      + C       
Sbjct: 124 -QVFAKYN-VSRLQPYLKLRQA---LLELRPAKNVLIDGVLGSGKTWVALDVCLS----- 173

Query: 108 DGLEVHCARS--VY--TFNAIDADGTITKGGYSSYIVVHERYCYKIANDY-PLALAAPLL 162
              +V C     ++       ++  T+        + + ++  Y+I  ++   +  +  +
Sbjct: 174 --YKVQCKMDFKIFWLNLKNCNSPETV--------LEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 163 CAGITVYTPMMRHKMNQPG--KSLGVIGLGGLGHMA-VKFGKAFGLNVTVLSTSTSKKEE 219
              I      +R  +        L V     L ++   K   AF L+  +L T T  K+ 
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCLLV-----LLNVQNAKAWNAFNLSCKILLT-TRFKQV 277

Query: 220 ALSLLGADKFVVSSDL--------EQMKALGKSLDFIIDT----ASGDHPFDAYMSLLKV 267
              L  A    +S D         E    L K LD             +P       L +
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPR-----RLSI 332

Query: 268 AGV-----------YVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPI 316
                         +  V          +SLN+    + ++M +  +   ++P    IP 
Sbjct: 333 IAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLS---VFPPSAHIPT 389

Query: 317 ---------------ENVNEALER--LIKRDVK-YRFVI-DIQNSLK 344
                            V   L +  L+++  K     I  I   LK
Sbjct: 390 ILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELK 436

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 43.3 bits (101), Expect = 1e-04
 Identities = 37/251 (14%), Positives = 67/251 (26%), Gaps = 87/251 (34%)

Query: 104 EYCNDGLEVHCARSVYTF--NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPL 161
           ++  + L ++     Y F  + I  +          YI   +R      ND  +   A  
Sbjct: 81  KFVEEVLRIN-----YKFLMSPIKTEQRQPSMMTRMYIEQRDRLY----NDNQVF--AKY 129

Query: 162 LCAGITVYTPMMRHKMN------QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS 215
                 V       K+       +P K++ + G+ G        GK      T ++    
Sbjct: 130 -----NVSRLQPYLKLRQALLELRPAKNVLIDGVLG-------SGK------TWVALDVC 171

Query: 216 KKEEALSLLGADKFVVS--------SDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
              +    +    F ++        + LE ++ L   +D    T+  DH           
Sbjct: 172 LSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQID-PNWTSRSDHS---------- 220

Query: 268 AGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQIETIPIENVNEALERLI 327
                          S   L I      Q  L      K Y              L  L+
Sbjct: 221 ---------------SNIKLRI---HSIQAELRRLLKSKPYE-----------NCL--LV 249

Query: 328 KRDVKYRFVID 338
             +V+     +
Sbjct: 250 LLNVQNAKAWN 260

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512

 Score = 46.8 bits (111), Expect = 8e-06
 Identities = 41/254 (16%), Positives = 84/254 (33%), Gaps = 50/254 (19%)

Query: 29   RRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
                   D   ++ +  + + DV+    K        +PG  +            R   G
Sbjct: 1554 ALPASCQDRLCSVYYTSLNFRDVMLATGKLSP---DSIPGKWLTRDCMLGMEFSGRDASG 1610

Query: 89   DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
              V                                    G +   G ++ +++ +   ++
Sbjct: 1611 RRVM-----------------------------------GMVPAEGLATSVLLLQHATWE 1635

Query: 149  IANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGLNV 207
            + + + L  AA +     T Y  ++     QPG+S+ +  G GG+G  A+    + G  V
Sbjct: 1636 VPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRV 1695

Query: 208  TVLSTSTSKKEEALSL----LGADKFVVSSDL--EQM---KALGKSLDFIIDTASGDHPF 258
               +  +++K   L      L    F  S D   EQ       GK +D ++++ + +   
Sbjct: 1696 FT-TVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEEK-L 1753

Query: 259  DAYMSLLKVAGVYV 272
             A +  L   G ++
Sbjct: 1754 QASVRCLAQHGRFL 1767

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} Length = 293

 Score = 45.7 bits (108), Expect = 9e-06
 Identities = 15/81 (18%), Positives = 30/81 (37%), Gaps = 5/81 (6%)

Query: 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV 231
           +        G ++ V+GLG +G    +   A G  V V +  +         +G + F  
Sbjct: 146 IQHTDFTIHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARIAE-MGMEPF-- 202

Query: 232 SSDLEQMKALGKSLDFIIDTA 252
              + +     + +D  I+T 
Sbjct: 203 --HISKAAQELRDVDVCINTI 221

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* Length = 334

 Score = 42.9 bits (102), Expect = 7e-05
 Identities = 29/91 (31%), Positives = 42/91 (46%), Gaps = 20/91 (21%)

Query: 159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKE 218
            P    G  VY           GK++G+IGLG +G    K  K F +   +L  S ++KE
Sbjct: 139 HPKWFLGYDVY-----------GKTIGIIGLGRIGQAIAKRAKGFNMR--ILYYSRTRKE 185

Query: 219 EALSLLGADKFVVSSDLEQMKALGKSLDFII 249
           E    L A +F     LE +  L +S DF++
Sbjct: 186 EVERELNA-EFK---PLEDL--LRES-DFVV 209

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A Length = 330

 Score = 42.6 bits (101), Expect = 1e-04
 Identities = 19/69 (27%), Positives = 32/69 (46%), Gaps = 8/69 (11%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
             ++G+IGLG +G    +  K FG+    L T    + E  +   A +FV      ++  
Sbjct: 155 QSTVGIIGLGRIGQAIARRLKPFGVQR-FLYTGRQPRPEEAAEFQA-EFV---STPEL-- 207

Query: 241 LGKSLDFII 249
             +S DFI+
Sbjct: 208 AAQS-DFIV 215

>3evt_A Phosphoglycerate dehydrogenase; structural genomics, PSI-2, protein structure initiative; 2.20A {Lactobacillus plantarum} Length = 324

 Score = 41.5 bits (98), Expect = 2e-04
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 9/72 (12%)

Query: 181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA 240
           G+ L + G G +G        A G++V  ++T+    +         + V  +      A
Sbjct: 137 GQQLLIYGTGQIGQSLAAKASALGMHVIGVNTTGHPAD------HFHETVAFTATAD--A 188

Query: 241 LGKSLDFIIDTA 252
           L  + +FI++  
Sbjct: 189 LATA-NFIVNAL 199

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	344
2cf5_A	357	Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign	100.0
3two_A	348	Mannitol dehydrogenase; cinnamyl-alcohol dehydroge	100.0
1yqd_A	366	Sinapyl alcohol dehydrogenase; lignin, monolignol,	100.0
1uuf_A	369	YAHK, zinc-type alcohol dehydrogenase-like protein	100.0
1piw_A	360	Hypothetical zinc-type alcohol dehydrogenase- like	100.0
3s2e_A	340	Zinc-containing alcohol dehydrogenase superfamily;	100.0
3uko_A	378	Alcohol dehydrogenase class-3; alcohol dehydrogena	100.0
1p0f_A	373	NADP-dependent alcohol dehydrogenase; ADH topology	100.0
1rjw_A	339	ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD	100.0
4eez_A	348	Alcohol dehydrogenase 1; site-saturation mutagenes	100.0
1f8f_A	371	Benzyl alcohol dehydrogenase; rossmann fold, oxido	100.0
1e3i_A	376	Alcohol dehydrogenase, class II; HET: NAD; 2.08A {	100.0
3jv7_A	345	ADH-A; dehydrogenase, nucleotide binding, rossmann	100.0
1h2b_A	359	Alcohol dehydrogenase; oxidoreductase, archaea, hy	100.0
2jhf_A	374	Alcohol dehydrogenase E chain; oxidoreductase, met	100.0
2fzw_A	373	Alcohol dehydrogenase class III CHI chain; S-nitro	100.0
2h6e_A	344	ADH-4, D-arabinose 1-dehydrogenase; rossman fold,	100.0
1cdo_A	374	Alcohol dehydrogenase; oxidoreductase, oxidoreduct	100.0
2hcy_A	347	Alcohol dehydrogenase 1; tetramer of asymmetric di	100.0
4ej6_A	370	Putative zinc-binding dehydrogenase; structural ge	100.0
1pl8_A	356	Human sorbitol dehydrogenase; NAD, oxidoreductase;	100.0
2eih_A	343	Alcohol dehydrogenase; zinc ION binding protein, s	100.0
2d8a_A	348	PH0655, probable L-threonine 3-dehydrogenase; pyro	100.0
1e3j_A	352	NADP(H)-dependent ketose reductase; oxidoreductase	100.0
3m6i_A	363	L-arabinitol 4-dehydrogenase; medium chain dehydro	100.0
4a2c_A	346	Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc	100.0
2dq4_A	343	L-threonine 3-dehydrogenase; NAD-dependent, oxidor	100.0
3uog_A	363	Alcohol dehydrogenase; structural genomics, protei	100.0
1vj0_A	380	Alcohol dehydrogenase, zinc-containing; TM0436, st	100.0
3fpc_A	352	NADP-dependent alcohol dehydrogenase; oxydoreducta	100.0
1jvb_A	347	NAD(H)-dependent alcohol dehydrogenase; archaeon,	100.0
3krt_A	456	Crotonyl COA reductase; structural genomics, prote	100.0
3ip1_A	404	Alcohol dehydrogenase, zinc-containing; structural	100.0
2dph_A	398	Formaldehyde dismutase; dismutation of aldehydes,	100.0
1kol_A	398	Formaldehyde dehydrogenase; oxidoreductase; HET: N	100.0
3qwb_A	334	Probable quinone oxidoreductase; rossmann fold, qu	100.0
2b5w_A	357	Glucose dehydrogenase; nucleotide binding motif, o	100.0
4dup_A	353	Quinone oxidoreductase; PSI-biology, structural ge	100.0
3goh_A	315	Alcohol dehydrogenase, zinc-containing; NP_718042.	100.0
3jyn_A	325	Quinone oxidoreductase; rossmann fold, protein-NAD	100.0
3tqh_A	321	Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella	100.0
3gms_A	340	Putative NADPH:quinone reductase; structural genom	100.0
4eye_A	342	Probable oxidoreductase; structural genomics, niai	100.0
3fbg_A	346	Putative arginate lyase; structural genomics, unkn	100.0
4a0s_A	447	Octenoyl-COA reductase/carboxylase; oxidoreductase	100.0
4dvj_A	363	Putative zinc-dependent alcohol dehydrogenase Pro;	100.0
3pi7_A	349	NADH oxidoreductase; groes-like fold, NAD(P)-bindi	100.0
3gqv_A	371	Enoyl reductase; medium-chain reductase (MDR super	100.0
1yb5_A	351	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
2cdc_A	366	Glucose dehydrogenase glucose 1-dehydrogenase, DHG	100.0
3gaz_A	343	Alcohol dehydrogenase superfamily protein; oxidore	100.0
1zsy_A	357	Mitochondrial 2-enoyl thioester reductase; medium-	100.0
4a27_A	349	Synaptic vesicle membrane protein VAT-1 homolog-L;	100.0
2vn8_A	375	Reticulon-4-interacting protein 1; mitochondrion,	100.0
1wly_A	333	CAAR, 2-haloacrylate reductase; NADPH-dependent ox	100.0
2j8z_A	354	Quinone oxidoreductase; medium-chain dehydrogenase	100.0
1qor_A	327	Quinone oxidoreductase; HET: NAP; 2.20A {Escherich	100.0
3nx4_A	324	Putative oxidoreductase; csgid, structural genomic	100.0
1gu7_A	364	Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s	100.0
4b7c_A	336	Probable oxidoreductase; NADP cofactor, rossmann f	100.0
2c0c_A	362	Zinc binding alcohol dehydrogenase, domain contain	100.0
1tt7_A	330	YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st	100.0
1xa0_A	328	Putative NADPH dependent oxidoreductases; structur	100.0
3iup_A	379	Putative NADPH:quinone oxidoreductase; YP_296108.1	100.0
2zb4_A	357	Prostaglandin reductase 2; rossmann fold, alternat	100.0
1iz0_A	302	Quinone oxidoreductase; APO-enzyme, riken structur	100.0
3slk_A	795	Polyketide synthase extender module 2; rossmann fo	100.0
2j3h_A	345	NADP-dependent oxidoreductase P1; double bond redu	100.0
1v3u_A	333	Leukotriene B4 12- hydroxydehydrogenase/prostaglan	100.0
2vz8_A	2512	Fatty acid synthase; transferase, phosphopantethei	99.98
1pqw_A	198	Polyketide synthase; rossmann fold, dimer, structu	99.83
2yvl_A	248	TRMI protein, hypothetical protein; tRNA, methyltr	99.08
1gpj_A	404	Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro	98.95
1pjc_A	361	Protein (L-alanine dehydrogenase); oxidoreductase,	98.77
2vhw_A	377	Alanine dehydrogenase; NAD, secreted, oxidoreducta	98.75
2eez_A	369	Alanine dehydrogenase; TTHA0216, structural genomi	98.73
3ce6_A	494	Adenosylhomocysteinase; protein-substrate complex,	98.64
1l7d_A	384	Nicotinamide nucleotide transhydrogenase, subunit	98.61
3oj0_A	144	Glutr, glutamyl-tRNA reductase; structural genomic	98.48
1x13_A	401	NAD(P) transhydrogenase subunit alpha; NAD(H)-bind	98.47
3p2y_A	381	Alanine dehydrogenase/pyridine nucleotide transhy;	98.34
4dio_A	405	NAD(P) transhydrogenase subunit alpha PART 1; stru	98.31
3ic5_A	118	Putative saccharopine dehydrogenase; structural ge	98.21
2g1u_A	155	Hypothetical protein TM1088A; structural genomics,	98.14
3d4o_A	293	Dipicolinate synthase subunit A; NP_243269.1, stru	98.12
3gvp_A	435	Adenosylhomocysteinase 3; protein CO-factor comple	98.1
4fgs_A	273	Probable dehydrogenase protein; PSI-biology, nysgr	98.08
3c85_A	183	Putative glutathione-regulated potassium-efflux S	98.06
1p91_A	269	Ribosomal RNA large subunit methyltransferase A; R	98.06
1o54_A	277	SAM-dependent O-methyltransferase; TM0748, structu	98.03
2rir_A	300	Dipicolinate synthase, A chain; structural genomic	97.99
3fpf_A	298	Mtnas, putative uncharacterized protein; thermonic	97.97
3fwz_A	140	Inner membrane protein YBAL; TRKA-N domain, E.coli	97.96
3n58_A	464	Adenosylhomocysteinase; ssgcid, hydrolase, structu	97.96
3ond_A	488	Adenosylhomocysteinase; plant protein, enzyme-subs	97.84
4eso_A	255	Putative oxidoreductase; NADP, structural genomics	97.81
3llv_A	141	Exopolyphosphatase-related protein; NAD(P)-binding	97.7
3ged_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.7
2b25_A	336	Hypothetical protein; structural genomics, methyl	97.65
2hmt_A	144	YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane	97.62
4b79_A	242	PA4098, probable short-chain dehydrogenase; oxidor	97.59
3h9u_A	436	Adenosylhomocysteinase; NAD CO-factor complex, str	97.59
3grp_A	266	3-oxoacyl-(acyl carrierprotein) reductase; structu	97.59
4fn4_A	254	Short chain dehydrogenase; NADH-binding, rossmann	97.59
3d3w_A	244	L-xylulose reductase; uronate cycle, short-chain d	97.58
4e6p_A	259	Probable sorbitol dehydrogenase (L-iditol 2-dehyd;	97.58
4dqx_A	277	Probable oxidoreductase protein; structural genomi	97.57
4df3_A	233	Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase;	97.57
3njr_A	204	Precorrin-6Y methylase; methyltransferase, decarbo	97.56
4g81_D	255	Putative hexonate dehydrogenase; enzyme function i	97.56
3gvc_A	277	Oxidoreductase, probable short-chain type dehydrog	97.56
3dii_A	247	Short-chain dehydrogenase/reductase SDR; SCOR, ros	97.55
4dry_A	281	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.54
4fs3_A	256	Enoyl-[acyl-carrier-protein] reductase [NADPH] FA;	97.54
4dyv_A	272	Short-chain dehydrogenase/reductase SDR; structura	97.54
3tzq_B	271	Short-chain type dehydrogenase/reductase; ssgcid,	97.53
3f9i_A	249	3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto	97.51
1lss_A	140	TRK system potassium uptake protein TRKA homolog;	97.51
3m1a_A	281	Putative dehydrogenase; short, PSI, MCSG, structur	97.5
3e8x_A	236	Putative NAD-dependent epimerase/dehydratase; stru	97.5
2a4k_A	263	3-oxoacyl-[acyl carrier protein] reductase; reduct	97.5
2wsb_A	254	Galactitol dehydrogenase; oxidoreductase, SDR, ros	97.49
1hxh_A	253	3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b	97.46
3tnl_A	315	Shikimate dehydrogenase; structural genomics, cent	97.46
2ew8_A	249	(S)-1-phenylethanol dehydrogenase; transferase; 2.	97.46
3tfo_A	264	Putative 3-oxoacyl-(acyl-carrier-protein) reducta;	97.45
3r6d_A	221	NAD-dependent epimerase/dehydratase; structural ge	97.45
3hm2_A	178	Precorrin-6Y C5,15-methyltransferase; alpha-beta-s	97.44
1iy8_A	267	Levodione reductase; oxidoreductase; HET: NAD; 1.6	97.41
3tjr_A	301	Short chain dehydrogenase; structural genomics, se	97.39
3f1l_A	252	Uncharacterized oxidoreductase YCIK; E. coli, NADP	97.39
1lu9_A	287	Methylene tetrahydromethanopterin dehydrogenase; a	97.38
3oig_A	266	Enoyl-[acyl-carrier-protein] reductase [NADH]; fat	97.37
2gdz_A	267	NAD+-dependent 15-hydroxyprostaglandin dehydrogen;	97.37
1nyt_A	271	Shikimate 5-dehydrogenase; alpha/beta domains, WID	97.35
3gem_A	260	Short chain dehydrogenase; structural genomics, AP	97.35
3lf2_A	265	Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross	97.34
3rwb_A	247	TPLDH, pyridoxal 4-dehydrogenase; short chain dehy	97.34
1geg_A	256	Acetoin reductase; SDR family, oxidoreductase; HET	97.33
3l07_A	285	Bifunctional protein fold; structural genomics, ID	97.33
3rkr_A	262	Short chain oxidoreductase; rossmann fold; HET: NA	97.33
3ucx_A	264	Short chain dehydrogenase; ssgcid, seattle structu	97.32
3abi_A	365	Putative uncharacterized protein PH1688; L-lysine	97.31
3ijr_A	291	Oxidoreductase, short chain dehydrogenase/reducta;	97.31
1spx_A	278	Short-chain reductase family member (5L265); paral	97.31
1uls_A	245	Putative 3-oxoacyl-acyl carrier protein reductase;	97.3
3t4x_A	267	Oxidoreductase, short chain dehydrogenase/reducta;	97.3
1xg5_A	279	ARPG836; short chain dehydrogenase, human, SGC, st	97.3
1x1t_A	260	D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S	97.3
3grk_A	293	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	97.29
3ioy_A	319	Short-chain dehydrogenase/reductase SDR; structura	97.28
1zem_A	262	Xylitol dehydrogenase; rossmann fold, dinucleotide	97.27
3k31_A	296	Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI	97.26
2ehd_A	234	Oxidoreductase, oxidoreductase, short-chain dehydr	97.26
2egg_A	297	AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff	97.26
1g0o_A	283	Trihydroxynaphthalene reductase; protein-NADPH-act	97.25
1wma_A	276	Carbonyl reductase [NADPH] 1; oxidoreductase; HET:	97.25
1hdc_A	254	3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi	97.24
3o26_A	311	Salutaridine reductase; short chain dehydrogenase/	97.23
3e05_A	204	Precorrin-6Y C5,15-methyltransferase (decarboxyla;	97.23
4egf_A	266	L-xylulose reductase; structural genomics, ssgcid,	97.23
2bgk_A	278	Rhizome secoisolariciresinol dehydrogenase; oxidor	97.21
3v2g_A	271	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.21
3r3s_A	294	Oxidoreductase; structural genomics, csgid, center	97.21
2yxe_A	215	Protein-L-isoaspartate O-methyltransferase; rossma	97.21
2uvd_A	246	3-oxoacyl-(acyl-carrier-protein) reductase; beta-k	97.21
3edm_A	259	Short chain dehydrogenase; structural genomics, ox	97.2
3d64_A	494	Adenosylhomocysteinase; structural genomics, ssgci	97.2
3l6e_A	235	Oxidoreductase, short-chain dehydrogenase/reducta;	97.19
4a26_A	300	Putative C-1-tetrahydrofolate synthase, cytoplasm;	97.19
3p2o_A	285	Bifunctional protein fold; structural genomics, ce	97.18
3is3_A	270	17BETA-hydroxysteroid dehydrogenase; short chain d	97.18
3n74_A	261	3-ketoacyl-(acyl-carrier-protein) reductase; seatt	97.18
3lbf_A	210	Protein-L-isoaspartate O-methyltransferase; modifi	97.18
3t4e_A	312	Quinate/shikimate dehydrogenase; structural genomi	97.17
2z2v_A	365	Hypothetical protein PH1688; L-lysine dehydrogenas	97.17
3rd5_A	291	Mypaa.01249.C; ssgcid, structural genomics, seattl	97.17
3pgx_A	280	Carveol dehydrogenase; structural genomics, seattl	97.16
1gee_A	261	Glucose 1-dehydrogenase; short-chain dehydrogenase	97.16
2o23_A	265	HADH2 protein; HSD17B10, schad, ERAB, type II HADH	97.16
1fmc_A	255	7 alpha-hydroxysteroid dehydrogenase; short-chain	97.15
3qvo_A	236	NMRA family protein; structural genomics, PSI-biol	97.15
2h7i_A	269	Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi	97.14
3op4_A	248	3-oxoacyl-[acyl-carrier protein] reductase; 3-keto	97.14
4gkb_A	258	3-oxoacyl-[acyl-carrier protein] reductase; putati	97.14
3ksu_A	262	3-oxoacyl-acyl carrier protein reductase; structur	97.14
3ew7_A	221	LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend	97.13
4a5o_A	286	Bifunctional protein fold; oxidoreductase, hydrola	97.13
1a4i_A	301	Methylenetetrahydrofolate dehydrogenase / methenyl	97.13
1nff_A	260	Putative oxidoreductase RV2002; directed evolution	97.13
3l9w_A	413	Glutathione-regulated potassium-efflux system Pro	97.13
3zv4_A	281	CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox	97.12
1v8b_A	479	Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2	97.12
1cyd_A	244	Carbonyl reductase; short-chain dehydrogenase, oxi	97.11
3ai3_A	263	NADPH-sorbose reductase; rossmann-fold, NADPH-depe	97.11
2pbf_A	227	Protein-L-isoaspartate O-methyltransferase beta-A	97.11
3oid_A	258	Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa	97.11
3ak4_A	263	NADH-dependent quinuclidinone reductase; SDR, (R)-	97.11
2axq_A	467	Saccharopine dehydrogenase; rossmann fold variant,	97.1
1zk4_A	251	R-specific alcohol dehydrogenase; short chain redu	97.1
4imr_A	275	3-oxoacyl-(acyl-carrier-protein) reductase; oxidor	97.09
3pxx_A	287	Carveol dehydrogenase; structural genomics, seattl	97.09
1vl8_A	267	Gluconate 5-dehydrogenase; TM0441, structural geno	97.09
3kzv_A	254	Uncharacterized oxidoreductase YIR035C; cytoplasmi	97.08
3u5t_A	267	3-oxoacyl-[acyl-carrier-protein] reductase; struct	97.08
1ja9_A	274	4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p	97.08
3imf_A	257	Short chain dehydrogenase; structural genomics, in	97.08
3dqp_A	219	Oxidoreductase YLBE; alpha-beta protein., structur	97.08
3e48_A	289	Putative nucleoside-diphosphate-sugar epimerase; a	97.07
1ae1_A	273	Tropinone reductase-I; oxidoreductase, tropane alk	97.07
3tpc_A	257	Short chain alcohol dehydrogenase-related dehydro;	97.07
3ngx_A	276	Bifunctional protein fold; methylenetetrahydrofola	97.07
1qsg_A	265	Enoyl-[acyl-carrier-protein] reductase; enoyl redu	97.06
3pwz_A	272	Shikimate dehydrogenase 3; alpha-beta, oxidoreduct	97.05
2ae2_A	260	Protein (tropinone reductase-II); oxidoreductase,	97.05
1hdo_A	206	Biliverdin IX beta reductase; foetal metabolism, H	97.05
2pd4_A	275	Enoyl-[acyl-carrier-protein] reductase [NADH]; ant	97.04
3hem_A	302	Cyclopropane-fatty-acyl-phospholipid synthase 2; p	97.04
3rku_A	287	Oxidoreductase YMR226C; substrate fingerprint, sho	97.04
2jah_A	247	Clavulanic acid dehydrogenase; short-chain dehydro	97.04
2c07_A	285	3-oxoacyl-(acyl-carrier protein) reductase; oxidor	97.04
3l77_A	235	Short-chain alcohol dehydrogenase; oxidoreductase;	97.04
3tsc_A	277	Putative oxidoreductase; structural genomics, seat	97.03
2wyu_A	261	Enoyl-[acyl carrier protein] reductase; oxidoreduc	97.02
1yde_A	270	Retinal dehydrogenase/reductase 3; oxidoreductase,	97.02
1ff9_A	450	Saccharopine reductase; lysine biosynthesis, alpha	97.01
3o38_A	266	Short chain dehydrogenase; tuberculosis, ortholog	97.01
1i1n_A	226	Protein-L-isoaspartate O-methyltransferase; S-aden	97.01
3v8b_A	283	Putative dehydrogenase, possibly 3-oxoacyl-[acyl-	97.01
3grz_A	205	L11 mtase, ribosomal protein L11 methyltransferase	97.01
4hp8_A	247	2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi	97.0
1id1_A	153	Putative potassium channel protein; RCK domain, E.	97.0
2nwq_A	272	Probable short-chain dehydrogenase; oxidoreductase	97.0
3dhn_A	227	NAD-dependent epimerase/dehydratase; reductase, PF	97.0
2gpy_A	233	O-methyltransferase; structural genomics, PSI, pro	96.99
3phh_A	269	Shikimate dehydrogenase; shikimate pathway, helico	96.99
3orf_A	251	Dihydropteridine reductase; alpha-beta-alpha sandw	96.98
1c1d_A	355	L-phenylalanine dehydrogenase; amino acid dehydrog	96.98
2x9g_A	288	PTR1, pteridine reductase; short chain dehydrogena	96.98
1i9g_A	280	Hypothetical protein RV2118C; mtase, adoMet, cryst	96.98
2q2v_A	255	Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore	96.98
1wwk_A	307	Phosphoglycerate dehydrogenase; riken structural g	96.98
3uce_A	223	Dehydrogenase; rossmann fold, oxidoreductase; HET:	96.97
1jg1_A	235	PIMT;, protein-L-isoaspartate O-methyltransferase;	96.97
2rhc_B	277	Actinorhodin polyketide ketoreductase; oxidoreduct	96.97
3kvo_A	346	Hydroxysteroid dehydrogenase-like protein 2; HSDL2	96.96
3h7a_A	252	Short chain dehydrogenase; oxidoreductase, PSI-2,	96.96
3ujc_A	266	Phosphoethanolamine N-methyltransferase; parasite;	96.95
2pwy_A	258	TRNA (adenine-N(1)-)-methyltransferase; mtase, ado	96.95
3nrc_A	280	Enoyl-[acyl-carrier-protein] reductase (NADH); ros	96.95
2bka_A	242	CC3, TAT-interacting protein TIP30; NADPH, PEG600,	96.94
3l4b_C	218	TRKA K+ channel protien TM1088B; potassium channel	96.94
3r1i_A	276	Short-chain type dehydrogenase/reductase; structur	96.94
3rih_A	293	Short chain dehydrogenase or reductase; structural	96.93
3sju_A	279	Keto reductase; short-chain dehydrogenase, oxidore	96.93
1jw9_B	249	Molybdopterin biosynthesis MOEB protein; MOEB: mod	96.93
3nyw_A	250	Putative oxidoreductase; fatty acid synthesis,3-ox	96.92
1edz_A	320	5,10-methylenetetrahydrofolate dehydrogenase; nucl	96.92
3qiv_A	253	Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR	96.91
3jyo_A	283	Quinate/shikimate dehydrogenase; enzyme-cofactor c	96.91
2fk8_A	318	Methoxy mycolic acid synthase 4; S-adenosylmethion	96.91
2avd_A	229	Catechol-O-methyltransferase; structural genomics,	96.9
1r18_A	227	Protein-L-isoaspartate(D-aspartate)-O-methyltrans;	96.9
2p91_A	285	Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD	96.89
2z1n_A	260	Dehydrogenase; reductase, SDR, oxidoreductase; 1.8	96.89
3tox_A	280	Short chain dehydrogenase; structural genomics, PS	96.88
4fc7_A	277	Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman	96.88
2g76_A	335	3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor	96.87
2nxc_A	254	L11 mtase, ribosomal protein L11 methyltransferase	96.87
3h2s_A	224	Putative NADH-flavin reductase; Q03B84, NESG, LCR1	96.87
3eey_A	197	Putative rRNA methylase; rRNA methylation, S-adeno	96.86
3p19_A	266	BFPVVD8, putative blue fluorescent protein; rossma	96.86
3o8q_A	281	Shikimate 5-dehydrogenase I alpha; structural geno	96.86
2ph3_A	245	3-oxoacyl-[acyl carrier protein] reductase; TTHA04	96.86
3guy_A	230	Short-chain dehydrogenase/reductase SDR; structura	96.85
3m33_A	226	Uncharacterized protein; structural genomics, PSI-	96.85
3gaf_A	256	7-alpha-hydroxysteroid dehydrogenase; seattle stru	96.85
3ek2_A	271	Enoyl-(acyl-carrier-protein) reductase (NADH); ssg	96.83
1xq6_A	253	Unknown protein; structural genomics, protein stru	96.83
1vbf_A	231	231AA long hypothetical protein-L-isoaspartate O-	96.83
3ftp_A	270	3-oxoacyl-[acyl-carrier protein] reductase; ssgcid	96.82
3pk0_A	262	Short-chain dehydrogenase/reductase SDR; ssgcid, s	96.82
2d1y_A	256	Hypothetical protein TT0321; strucrtural genomics,	96.81
3dr5_A	221	Putative O-methyltransferase; Q8NRD3, CGL1119, PF0	96.81
3oec_A	317	Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO;	96.81
2gb4_A	252	Thiopurine S-methyltransferase; 18204406, thiopuri	96.81
3cea_A	346	MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore	96.8
3cxt_A	291	Dehydrogenase with different specificities; rossma	96.8
2hnk_A	239	SAM-dependent O-methyltransferase; modified rossma	96.8
3mti_A	185	RRNA methylase; SAM-dependent, PSI, MCSG, structur	96.8
2ekl_A	313	D-3-phosphoglycerate dehydrogenase; structural gen	96.8
2c2x_A	281	Methylenetetrahydrofolate dehydrogenase- methenylt	96.79
3svt_A	281	Short-chain type dehydrogenase/reductase; ssgcid,	96.79
2pnf_A	248	3-oxoacyl-[acyl-carrier-protein] reductase; short	96.79
3tfw_A	248	Putative O-methyltransferase; PSI-biology, nysgrc,	96.79
1b0a_A	288	Protein (fold bifunctional protein); folate, dehyd	96.79
3mb5_A	255	SAM-dependent methyltransferase; RNA methyltransfe	96.79
3jtm_A	351	Formate dehydrogenase, mitochondrial; mitochondrio	96.79
2b4q_A	276	Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier	96.78
3awd_A	260	GOX2181, putative polyol dehydrogenase; oxidoreduc	96.78
1leh_A	364	Leucine dehydrogenase; oxidoreductase; 2.20A {Lysi	96.78
2zat_A	260	Dehydrogenase/reductase SDR family member 4; alpha	96.76
3ppi_A	281	3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de	96.75
1e7w_A	291	Pteridine reductase; dihydrofolate reductase, shor	96.75
2gn4_A	344	FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann	96.75
3ruf_A	351	WBGU; rossmann fold, UDP-hexose 4-epimerase, isome	96.74
1yb1_A	272	17-beta-hydroxysteroid dehydrogenase type XI; shor	96.74
3asu_A	248	Short-chain dehydrogenase/reductase SDR; SDR famil	96.74
2zcu_A	286	Uncharacterized oxidoreductase YTFG; alpha-beta sa	96.74
2cfc_A	250	2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor	96.73
3afn_B	258	Carbonyl reductase; alpha/beta/alpha, rossmann-fol	96.73
2jl1_A	287	Triphenylmethane reductase; oxidoreductase, biorem	96.72
2dtx_A	264	Glucose 1-dehydrogenase related protein; rossmann	96.71
4ibo_A	271	Gluconate dehydrogenase; enzyme function initiativ	96.71
1edo_A	244	Beta-keto acyl carrier protein reductase; nucleoti	96.7
2ag5_A	246	DHRS6, dehydrogenase/reductase (SDR family) member	96.7
1xq1_A	266	Putative tropinone reducatse; structural genomics,	96.69
1kpg_A	287	CFA synthase;, cyclopropane-fatty-acyl-phospholipi	96.69
1zmt_A	254	Haloalcohol dehalogenase HHEC; halohydrin dehaloge	96.69
2qhx_A	328	Pteridine reductase 1; oxidoreductase, short-chain	96.68
3a28_C	258	L-2.3-butanediol dehydrogenase; chiral substrate r	96.68
1mxh_A	276	Pteridine reductase 2; SDR topology, protein-subst	96.68
1fbn_A	230	MJ fibrillarin homologue; MJ proteins, ribosomal R	96.68
1o5i_A	249	3-oxoacyl-(acyl carrier protein) reductase; TM1169	96.67
1nkv_A	256	Hypothetical protein YJHP; structural genomics, PS	96.67
1uzm_A	247	3-oxoacyl-[acyl-carrier protein] reductase; beta-k	96.67
3icc_A	255	Putative 3-oxoacyl-(acyl carrier protein) reducta;	96.66
2d5c_A	263	AROE, shikimate 5-dehydrogenase; substrate, dimer,	96.66
3i1j_A	247	Oxidoreductase, short chain dehydrogenase/reducta;	96.65
1xkq_A	280	Short-chain reductase family member (5D234); parra	96.64
4ina_A	405	Saccharopine dehydrogenase; structural genomics, P	96.63
3lyl_A	247	3-oxoacyl-(acyl-carrier-protein) reductase; alpha	96.62
2pd6_A	264	Estradiol 17-beta-dehydrogenase 8; short-chain deh	96.61
2j6i_A	364	Formate dehydrogenase; oxidoreductase, D-specific-	96.61
1iy9_A	275	Spermidine synthase; rossmann fold, structural gen	96.6
1xhl_A	297	Short-chain dehydrogenase/reductase family member	96.59
3d7l_A	202	LIN1944 protein; APC89317, structural genomics, PS	96.59
2fwm_X	250	2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e	96.59
4hy3_A	365	Phosphoglycerate oxidoreductase; PSI-biology, stru	96.59
1yxm_A	303	Pecra, peroxisomal trans 2-enoyl COA reductase; pe	96.58
3ctm_A	279	Carbonyl reductase; alcohol dehydrogenase, short-c	96.58
3fbt_A	282	Chorismate mutase and shikimate 5-dehydrogenase fu	96.57
1w6u_A	302	2,4-dienoyl-COA reductase, mitochondrial precursor	96.57
2nyu_A	196	Putative ribosomal RNA methyltransferase 2; SAM, s	96.56
2nac_A	393	NAD-dependent formate dehydrogenase; oxidoreductas	96.56
1xu9_A	286	Corticosteroid 11-beta-dehydrogenase, isozyme 1; h	96.56
2ekp_A	239	2-deoxy-D-gluconate 3-dehydrogenase; structural ge	96.55
3ou2_A	218	SAM-dependent methyltransferase; O-methyltransfera	96.55
2gas_A	307	Isoflavone reductase; NADPH-dependent reductase, o	96.54
3e9n_A	245	Putative short-chain dehydrogenase/reductase; stru	96.54
1y1p_A	342	ARII, aldehyde reductase II; rossmann fold, short	96.54
3uve_A	286	Carveol dehydrogenase ((+)-trans-carveol dehydrog;	96.54
3uxy_A	266	Short-chain dehydrogenase/reductase SDR; structura	96.54
1p77_A	272	Shikimate 5-dehydrogenase; NADPH, oxidoreductase;	96.53
1ooe_A	236	Dihydropteridine reductase; structural genomics, P	96.52
1dl5_A	317	Protein-L-isoaspartate O-methyltransferase; isoasp	96.52
2qq5_A	260	DHRS1, dehydrogenase/reductase SDR family member 1	96.51
1zmo_A	244	Halohydrin dehalogenase; haloalcohol dehalogenase,	96.49
3tum_A	269	Shikimate dehydrogenase family protein; rossmann-f	96.49
1vl6_A	388	Malate oxidoreductase; TM0542, NAD-dependent malic	96.49
3gg9_A	352	D-3-phosphoglycerate dehydrogenase oxidoreductase;	96.47
3ezl_A	256	Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA	96.46
3v2h_A	281	D-beta-hydroxybutyrate dehydrogenase; structural g	96.46
3enk_A	341	UDP-glucose 4-epimerase; seattle structural genomi	96.45
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.43
2hq1_A	247	Glucose/ribitol dehydrogenase; CTH-1438, structura	96.42
3vc1_A	312	Geranyl diphosphate 2-C-methyltransferase; rossman	96.42
3duw_A	223	OMT, O-methyltransferase, putative; alternating of	96.42
4dmm_A	269	3-oxoacyl-[acyl-carrier-protein] reductase; rossma	96.42
1xgk_A	352	Nitrogen metabolite repression regulator NMRA; ros	96.41
1qyd_A	313	Pinoresinol-lariciresinol reductase; NADPH-depende	96.41
2dbq_A	334	Glyoxylate reductase; D-3-phosphoglycerate dehydro	96.41
1fjh_A	257	3alpha-hydroxysteroid dehydrogenase/carbonyl reduc	96.4
1l3i_A	192	Precorrin-6Y methyltransferase/putative decarboxyl	96.39
2gcg_A	330	Glyoxylate reductase/hydroxypyruvate reductase; NA	96.39
3sx2_A	278	Putative 3-ketoacyl-(acyl-carrier-protein) reduct;	96.38
3s55_A	281	Putative short-chain dehydrogenase/reductase; stru	96.38
4eue_A	418	Putative reductase CA_C0462; TER, biofuel, synthet	96.38
4e5n_A	330	Thermostable phosphite dehydrogenase; D-2-hydroxya	96.37
3e03_A	274	Short chain dehydrogenase; structural genomics, PS	96.37
3dfz_A	223	SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase	96.36
3uf0_A	273	Short-chain dehydrogenase/reductase SDR; gluconate	96.36
3tr6_A	225	O-methyltransferase; cellular processes; HET: SAH;	96.36
3t7c_A	299	Carveol dehydrogenase; structural genomics, seattl	96.35
1yo6_A	250	Putative carbonyl reductase sniffer; tyrosine-depe	96.35
3cbg_A	232	O-methyltransferase; cyanobacterium; HET: SAH FER	96.35
1dhr_A	241	Dihydropteridine reductase; oxidoreductase(acting	96.34
1h5q_A	265	NADP-dependent mannitol dehydrogenase; oxidoreduct	96.33
4dll_A	320	2-hydroxy-3-oxopropionate reductase; structural ge	96.33
3sc4_A	285	Short chain dehydrogenase (A0QTM2 homolog); ssgcid	96.33
3tl3_A	257	Short-chain type dehydrogenase/reductase; ssgcid,	96.32
1gdh_A	320	D-glycerate dehydrogenase; oxidoreductase(CHOH (D)	96.31
3g0o_A	303	3-hydroxyisobutyrate dehydrogenase; NAD(P), valine	96.31
2aef_A	234	Calcium-gated potassium channel MTHK; rossmann fol	96.31
3orh_A	236	Guanidinoacetate N-methyltransferase; structura ge	96.3
2glx_A	332	1,5-anhydro-D-fructose reductase; NADP(H) dependen	96.3
1pjz_A	203	Thiopurine S-methyltransferase; polymorphism, S-ad	96.3
3c1o_A	321	Eugenol synthase; phenylpropene, PIP reductase, sh	96.29
1gz6_A	319	Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF	96.29
2w2k_A	348	D-mandelate dehydrogenase; 2-hydroxyacid dehydroge	96.28
3m2p_A	311	UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J	96.28
4da9_A	280	Short-chain dehydrogenase/reductase; structural ge	96.27
3i9f_A	170	Putative type 11 methyltransferase; structural gen	96.27
3oml_A	613	GH14720P, peroxisomal multifunctional enzyme type	96.26
1sui_A	247	Caffeoyl-COA O-methyltransferase; rossmann fold, p	96.25
2et6_A	604	(3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox	96.24
3vtz_A	269	Glucose 1-dehydrogenase; rossmann fold, oxidoreduc	96.24
4gek_A	261	TRNA (CMO5U34)-methyltransferase; structural genom	96.24
2q1w_A	333	Putative nucleotide sugar epimerase/ dehydratase;	96.23
3u62_A	253	Shikimate dehydrogenase; shikimate pathway, oxidor	96.23
2bd0_A	244	Sepiapterin reductase; oxidoreductase; HET: NAP BI	96.22
1sby_A	254	Alcohol dehydrogenase; ternary complex, NAD, trifl	96.22
1g8a_A	227	Fibrillarin-like PRE-rRNA processing protein; rRNA	96.21
2h78_A	302	Hibadh, 3-hydroxyisobutyrate dehydrogenase; APC601	96.18
4iin_A	271	3-ketoacyl-acyl carrier protein reductase (FABG);	96.18
3iv6_A	261	Putative Zn-dependent alcohol dehydrogenase; alpha	96.18
3hnr_A	220	Probable methyltransferase BT9727_4108; structural	96.17
3db2_A	354	Putative NADPH-dependent oxidoreductase; two domai	96.17
4h15_A	261	Short chain alcohol dehydrogenase-related dehydro;	96.16
1mjf_A	281	Spermidine synthase; spermidine synthetase, struct	96.16
3f4k_A	257	Putative methyltransferase; structural genomics, P	96.16
1ixk_A	315	Methyltransferase; open beta sheet; 1.90A {Pyrococ	96.14
4hkt_A	331	Inositol 2-dehydrogenase; structural genomics, nys	96.14
3pef_A	287	6-phosphogluconate dehydrogenase, NAD-binding; gam	96.14
3ggo_A	314	Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b	96.13
3nzo_A	399	UDP-N-acetylglucosamine 4,6-dehydratase; structura	96.12
1vpd_A	299	Tartronate semialdehyde reductase; structural geno	96.11
1npy_A	271	Hypothetical shikimate 5-dehydrogenase-like protei	96.11
4g65_A	461	TRK system potassium uptake protein TRKA; structur	96.1
3osu_A	246	3-oxoacyl-[acyl-carrier-protein] reductase; struct	96.08
2b2c_A	314	Spermidine synthase; beta-alpha, transferase; 2.50	96.08
3don_A	277	Shikimate dehydrogenase; alpha-beta structure, ros	96.06
3bus_A	273	REBM, methyltransferase; rebeccamycin synthesis; H	96.06
2g5c_A	281	Prephenate dehydrogenase; TYRA, oxidoreductase; HE	96.05
1inl_A	296	Spermidine synthase; beta-barrel, rossman fold, st	96.05
2x4g_A	342	Nucleoside-diphosphate-sugar epimerase; isomerase;	96.03
2ahr_A	259	Putative pyrroline carboxylate reductase; pyrrolin	96.02
3doj_A	310	AT3G25530, dehydrogenase-like protein; gamma-hydro	96.02
2hk9_A	275	Shikimate dehydrogenase; shikimate pathway, drug d	96.02
4g2n_A	345	D-isomer specific 2-hydroxyacid dehydrogenase, Na;	96.02
3adn_A	294	Spermidine synthase; aminopropyltransferase, polya	96.02
2wm3_A	299	NMRA-like family domain containing protein 1; unkn	96.01
2kw5_A	202	SLR1183 protein; structural genomics, northeast st	95.98
2d0i_A	333	Dehydrogenase; structural genomics, NPPSFA, nation	95.97
3rc1_A	350	Sugar 3-ketoreductase; sugar biosynthesis, TDP bin	95.97
2dkn_A	255	3-alpha-hydroxysteroid dehydrogenase; oxidoreducta	95.97
2o07_A	304	Spermidine synthase; structural genomics, structur	95.97
3c3y_A	237	Pfomt, O-methyltransferase; plant secondary metabo	95.97
4dmg_A	393	Putative uncharacterized protein TTHA1493; rRNA, m	95.96
3evz_A	230	Methyltransferase; NYSGXRC, NEW YORK SGX research	95.96
4e3z_A	272	Putative oxidoreductase protein; PSI-biology, stru	95.95
3i4f_A	264	3-oxoacyl-[acyl-carrier protein] reductase; struct	95.95
2r6j_A	318	Eugenol synthase 1; phenylpropene, PIP reductase,	95.95
2p35_A	259	Trans-aconitate 2-methyltransferase; SAM dependent	95.94
3i6i_A	346	Putative leucoanthocyanidin reductase 1; rossmann	95.93
3qlj_A	322	Short chain dehydrogenase; structural genomics, se	95.93
3gjy_A	317	Spermidine synthase; APC62791, structural genomics	95.93
3ius_A	286	Uncharacterized conserved protein; APC63810, silic	95.92
3sm3_A	235	SAM-dependent methyltransferases; NESG, structural	95.91
2nm0_A	253	Probable 3-oxacyl-(acyl-carrier-protein) reductas;	95.9
2i7c_A	283	Spermidine synthase; transferase, structural genom	95.9
3gk3_A	269	Acetoacetyl-COA reductase; acetoacetyl-CO reductas	95.89
1nvt_A	287	Shikimate 5'-dehydrogenase; structural genomics, P	95.89
1nt2_A	210	Fibrillarin-like PRE-rRNA processing protein; adeM	95.88
2o57_A	297	Putative sarcosine dimethylglycine methyltransfera	95.85
1sb8_A	352	WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN	95.85
1yb2_A	275	Hypothetical protein TA0852; structural genomics,	95.85
2pt6_A	321	Spermidine synthase; transferase, structural genom	95.85
3sxp_A	362	ADP-L-glycero-D-mannoheptose-6-epimerase; rossman	95.84
2pzm_A	330	Putative nucleotide sugar epimerase/ dehydratase;	95.84
3q2i_A	354	Dehydrogenase; rossmann fold, UDP-sugar binding, N	95.83
1j4a_A	333	D-LDH, D-lactate dehydrogenase; NAD-dependent dehy	95.83
4id9_A	347	Short-chain dehydrogenase/reductase; putative dehy	95.83
3u9l_A	324	3-oxoacyl-[acyl-carrier-protein] reductase; struct	95.81
3l8d_A	242	Methyltransferase; structural genomics, PSI, nysgr	95.81
2f1k_A	279	Prephenate dehydrogenase; tyrosine synthesis, X-RA	95.78
2uyy_A	316	N-PAC protein; long-chain dehydrogenase, cytokine;	95.78
3dli_A	240	Methyltransferase; PSI-II, NYSGXRC, structural gen	95.78
3gvx_A	290	Glycerate dehydrogenase related protein; NYSGXRC,	95.77
1zud_1	251	Adenylyltransferase THIF; thiamin, thiazole, prote	95.76
3bwc_A	304	Spermidine synthase; SAM, SGPP, structura genomics	95.76
1zx0_A	236	Guanidinoacetate N-methyltransferase; structural g	95.75
3kkz_A	267	Uncharacterized protein Q5LES9; putative methyltra	95.75
3bkw_A	243	MLL3908 protein, S-adenosylmethionine dependent me	95.74
1mx3_A	347	CTBP1, C-terminal binding protein 1; nuclear prote	95.73
3slg_A	372	PBGP3 protein; structural genomics, seattle struct	95.73
3s8m_A	422	Enoyl-ACP reductase; rossmann fold, oxidoreductase	95.71
1yqg_A	263	Pyrroline-5-carboxylate reductase; structural geno	95.71
2q1s_A	377	Putative nucleotide sugar epimerase/ dehydratase;	95.71
1dxy_A	333	D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxyc	95.71
1sny_A	267	Sniffer CG10964-PA; alpha and beta protein, rossma	95.71
1vl5_A	260	Unknown conserved protein BH2331; putative methylt	95.71
3e23_A	211	Uncharacterized protein RPA2492; alpha-beta protei	95.7
3g5t_A	299	Trans-aconitate 3-methyltransferase; structural ge	95.69
1oaa_A	259	Sepiapterin reductase; tetrahydrobiopterin, oxidor	95.69
1uir_A	314	Polyamine aminopropyltransferase; spermidien synth	95.67
2yqz_A	263	Hypothetical protein TTHA0223; RNA methyltransfera	95.66
1nvm_B	312	Acetaldehyde dehydrogenase (acylating), 4-hydroxy-	95.66
3rft_A	267	Uronate dehydrogenase; apoenzyme, rossmann fold, N	95.65
4e4y_A	244	Short chain dehydrogenase family protein; structur	95.64

>2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A*

Probab=100.00  E-value=1.8e-59  Score=433.28  Aligned_cols=341  Identities=46%  Similarity=0.858  Sum_probs=293.2

Q ss_pred             CCccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecC
Q 019199            1 MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      |.-|+.+|+++++..+++++.+++++++.|+|++|||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+
T Consensus         1 ~~~m~~~m~~~a~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~   80 (357)
T 2cf5_A            1 MGIMEAERKTTGWAARDPSGILSPYTYTLRETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVGEVVEVGS   80 (357)
T ss_dssp             -----CCCEEEEEEECSTTCCEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEEEEEEECS
T ss_pred             CccccCcceeEEEEEccCCCCcEEEEecCCCCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeEEEEEECC
Confidence            67788999999999988888899999999999999999999999999999999988765556799999999999999999


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP  160 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~  160 (344)
                      ++++|++||+|++.+...+|++|.+|++|.++.|++....+.+....|....|+|+||+++|++.++++|+++++++||+
T Consensus        81 ~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~  160 (357)
T 2cf5_A           81 DVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKIPEGMAVEQAAP  160 (357)
T ss_dssp             SCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEECCSSCCHHHHTG
T ss_pred             CCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEECcCCCCHHHhhh
Confidence            99999999999887766789999999999999997654333322222334579999999999999999999999999999


Q ss_pred             cchhhhHhHHHHHhccCCC-CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH
Q 019199          161 LLCAGITVYTPMMRHKMNQ-PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK  239 (344)
Q Consensus       161 l~~~~~ta~~~l~~~~~~~-~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~  239 (344)
                      +++++.|||+++.+... + +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+.+++|+++++++++.+.+.
T Consensus       161 l~~~~~ta~~~l~~~~~-~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~vi~~~~~~~~~  239 (357)
T 2cf5_A          161 LLCAGVTVYSPLSHFGL-KQPGLRGGILGLGGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADDYVIGSDQAKMS  239 (357)
T ss_dssp             GGTHHHHHHHHHHHTST-TSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSCEEETTCHHHHH
T ss_pred             hhhhHHHHHHHHHhcCC-CCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCceeeccccHHHHH
Confidence            99999999999987654 7 999999999999999999999999999999999999998885589999999988877777


Q ss_pred             HhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cccc-cCCceee----------eechHhHHHHHHHHHhCCC
Q 019199          240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVK-FSPASLN----------IGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       240 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~-~~~~~~~----------~~~~~~~~~~~~~~~~g~~  307 (344)
                      +..+++|++||++|.+..++.++++++++|+++.+|.. .... ++.. +.          ....++++++++++++|++
T Consensus       240 ~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~-~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l  318 (357)
T 2cf5_A          240 ELADSLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNPLQFLTPL-LMLGRKVITGSFIGSMKETEEMLEFCKEKGL  318 (357)
T ss_dssp             HSTTTEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSCCCCCHHH-HHHHTCEEEECCSCCHHHHHHHHHHHHHTTC
T ss_pred             HhcCCCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCCccccCHH-HHhCccEEEEEccCCHHHHHHHHHHHHcCCC
Confidence            77778999999999876689999999999999999976 2222 2221 11          2235789999999999999


Q ss_pred             ccceEEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          308 YPQIETIPIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       308 ~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                      ++.+++||++++++|++.+.+++..||+|+.++++.
T Consensus       319 ~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~  354 (357)
T 2cf5_A          319 SSIIEVVKMDYVNTAFERLEKNDVRYRFVVDVEGSN  354 (357)
T ss_dssp             CCCEEEEEGGGHHHHHHHHHTTCSSSEEEEETTSCC
T ss_pred             CCceEEEeHHHHHHHHHHHHCCCCceEEEEeCCccc
Confidence            988899999999999999999988899999997654

>3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori}

Probab=100.00  E-value=3.3e-58  Score=423.57  Aligned_cols=330  Identities=39%  Similarity=0.723  Sum_probs=283.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      |+++++...++++.+++++++.|+|+++||||||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         3 m~mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G~V~~vG~~v~~~~v   82 (348)
T 3two_A            3 VQSKGFAIFSKDEHFKPHDFSRHAVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAGIIKEVGKGVKKFKI   82 (348)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEEEEEEECTTCCSCCT
T ss_pred             eEEEEEEEccCCCCCeEEEeeCCCCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeEEEEEECCCCCCCCC
Confidence            45677777767778999999999999999999999999999999999998776788999999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccc--cCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI--DADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~--~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ||+|++.+...+|+.|.+|++|.++.|......+...  ...+....|+|+||+.+|++.++++|+++++++||++++++
T Consensus        83 GdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~  162 (348)
T 3two_A           83 GDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISVDKNAPLEKVAPLLCAG  162 (348)
T ss_dssp             TCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHH
T ss_pred             CCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEECCCCCCHHHhhhhhhhH
Confidence            9999987777799999999999999998432222111  01122345999999999999999999999999999999999


Q ss_pred             hHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCc
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~  245 (344)
                      .|||+++.+. .+++|++|||+|+|++|++++|+|+.+|++|++++.++++++.+ +++|+++++  .+.+.   +..++
T Consensus       163 ~ta~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~--~~~~~---~~~~~  235 (348)
T 3two_A          163 ITTYSPLKFS-KVTKGTKVGVAGFGGLGSMAVKYAVAMGAEVSVFARNEHKKQDA-LSMGVKHFY--TDPKQ---CKEEL  235 (348)
T ss_dssp             HHHHHHHHHT-TCCTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSSTTHHHH-HHTTCSEEE--SSGGG---CCSCE
T ss_pred             HHHHHHHHhc-CCCCCCEEEEECCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HhcCCCeec--CCHHH---HhcCC
Confidence            9999999877 56999999999999999999999999999999999999999988 689999988  33332   22389


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccc-cCCce--------ee---eechHhHHHHHHHHHhCCCccce
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVK-FSPAS--------LN---IGGTKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~-~~~~~--------~~---~~~~~~~~~~~~~~~~g~~~~~~  311 (344)
                      |++||++|++..+..++++++++|+++.+|...  ... ++...        +.   ....++++++++++++|++++.+
T Consensus       236 D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~  315 (348)
T 3two_A          236 DFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEVAPVLSVFDFIHLGNRKVYGSLIGGIKETQEMVDFSIKHNIYPEI  315 (348)
T ss_dssp             EEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGGCCEEEHHHHHHTCSCEEEECCSCCHHHHHHHHHHHHHTTCCCCE
T ss_pred             CEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCCcccCCHHHHHhhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceE
Confidence            999999999866999999999999999998763  111 22111        11   33457899999999999999988


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEEeCCCCC
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVIDIQNSLK  344 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~~  344 (344)
                      ++|+++++++||+.+.+++..||+||++++++|
T Consensus       316 ~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~~~  348 (348)
T 3two_A          316 DLILGKDIDTAYHNLTHGKAKFRYVIDMKKSFD  348 (348)
T ss_dssp             EEECGGGHHHHHHHHHTTCCCSEEEEEGGGCC-
T ss_pred             EEEEHHHHHHHHHHHHcCCCceEEEEecCCcCC
Confidence            999999999999999999989999999998875

>1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A*

Probab=100.00  E-value=3.5e-57  Score=419.15  Aligned_cols=335  Identities=53%  Similarity=0.887  Sum_probs=291.2

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      .+|++++|..+++++.+++.+++.|+|++|||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus        13 ~~mk~~~~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   92 (366)
T 1yqd_A           13 HPVKAFGWAARDQSGHLSPFNFSRRATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVGEVTEVGSKVKKV   92 (366)
T ss_dssp             SSEEEEEEEECSTTCCEEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CCeeEEEEEEcCCCCCcEEEEccCCCCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEEEEEEECCCCCcC
Confidence            47899999988888889999999999999999999999999999999998876545689999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||+|++.+...+|+.|.+|++|.++.|++....+.+....|....|+|+||+.+|++.++++|+++++++||++++++
T Consensus        93 ~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~P~~ls~~~aa~l~~~~  172 (366)
T 1yqd_A           93 NVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRFPDNMPLDGGAPLLCAG  172 (366)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEECCTTSCTTTTGGGGTHH
T ss_pred             CCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEECCCCCCHHHhhhhhhhH
Confidence            99999987766668999999999999999765433332222233467999999999999999999999999999999999


Q ss_pred             hHhHHHHHhccCCC-CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCC
Q 019199          166 ITVYTPMMRHKMNQ-PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKS  244 (344)
Q Consensus       166 ~ta~~~l~~~~~~~-~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~  244 (344)
                      .|||+++.+... + +|++|||+|+|++|++++|+|+.+|++|+++++++++++.+.+++|++.++++.+.+.+.+..++
T Consensus       173 ~ta~~al~~~~~-~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~~~~~~~~~~~~  251 (366)
T 1yqd_A          173 ITVYSPLKYFGL-DEPGKHIGIVGLGGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSRDQEQMQAAAGT  251 (366)
T ss_dssp             HHHHHHHHHTTC-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETTCHHHHHHTTTC
T ss_pred             HHHHHHHHhcCc-CCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEeccCHHHHHHhhCC
Confidence            999999987654 6 99999999999999999999999999999999999999888568999999999887777777778


Q ss_pred             ccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEE
Q 019199          245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIET  313 (344)
Q Consensus       245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~  313 (344)
                      +|++||++|....++.++++++++|+++.+|.. ....++...+.          ....++++++++++++|++++.+++
T Consensus       252 ~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~  331 (366)
T 1yqd_A          252 LDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKPLELPAFSLIAGRKIVAGSGIGGMKETQEMIDFAAKHNITADIEV  331 (366)
T ss_dssp             EEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSCEEECHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHTTCCCCEEE
T ss_pred             CCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCCCCcCHHHHHhCCcEEEEecCCCHHHHHHHHHHHHcCCCCCceEE
Confidence            999999999876689999999999999999876 33333322111          2235789999999999999988899


Q ss_pred             EeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          314 IPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       314 ~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      |+++++++||+.+.+++..||+|+.+++
T Consensus       332 ~~l~~~~~A~~~~~~~~~~gKvvl~~~~  359 (366)
T 1yqd_A          332 ISTDYLNTAMERLAKNDVRYRFVIDVGN  359 (366)
T ss_dssp             ECGGGHHHHHHHHHTTCCSSEEEECHHH
T ss_pred             EcHHHHHHHHHHHHcCCcceEEEEEccc
Confidence            9999999999999999888999998754

>1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.3e-57  Score=418.06  Aligned_cols=335  Identities=45%  Similarity=0.751  Sum_probs=285.4

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      ..|++++|...++.+.+++++++.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus        19 ~~~~~~a~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   98 (369)
T 1uuf_A           19 AGLKIKAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKY   98 (369)
T ss_dssp             ----CEEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             cCceEEEEEEcCCCCCcEEEEecCCCCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceEEEEEECCCCCCC
Confidence            46778888887666889999999999999999999999999999999998876555679999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCcccccccccc-CCCCccCCcceeEEEEecceEEEcCCC-CCcccccccch
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID-ADGTITKGGYSSYIVVHERYCYKIAND-YPLALAAPLLC  163 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~-~~~~~~~g~~~~~~~~~~~~~~~~P~~-~~~~~aa~l~~  163 (344)
                      ++||+|++.+...+|+.|.+|++|.++.|++....+.+.. ..|....|+|+||+.+|++.++++|++ +++++||++++
T Consensus        99 ~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~P~~~ls~~~aa~l~~  178 (369)
T 1uuf_A           99 APGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRHPQEQLAAVAPLLC  178 (369)
T ss_dssp             CTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCSCGGGHHHHGGGGT
T ss_pred             CCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEECCCCCCCHHHhhhhhh
Confidence            9999999888777899999999999999997632221110 012234699999999999999999999 99999999999


Q ss_pred             hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcC
Q 019199          164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGK  243 (344)
Q Consensus       164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~  243 (344)
                      ++.|||+++.+. .+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++.++++.+.+...++.+
T Consensus       179 ~~~tA~~al~~~-~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~~  256 (369)
T 1uuf_A          179 AGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVNSRNADEMAAHLK  256 (369)
T ss_dssp             HHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEETTCHHHHHTTTT
T ss_pred             hHHHHHHHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEeccccHHHHHHhhc
Confidence            999999999876 56999999999999999999999999999999999999999888 6899999999988776666667


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Ccc-ccCCceee----------eechHhHHHHHHHHHhCCCccce
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKV-KFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~  311 (344)
                      ++|++||++|.+..++.++++++++|+++.+|.. ... .++...+.          ....++++++++++++|++++.+
T Consensus       257 g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~i~~~i  336 (369)
T 1uuf_A          257 SFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGIVADI  336 (369)
T ss_dssp             CEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHHHHHHHHTCCCCE
T ss_pred             CCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCCccccCHHHHHhCCcEEEEeecCCHHHHHHHHHHHHhCCCCcce
Confidence            8999999999876699999999999999999876 222 23322111          22357899999999999999888


Q ss_pred             EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          312 ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       312 ~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      ++|+++++++|++.+.+++..||+|+.+++.
T Consensus       337 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~  367 (369)
T 1uuf_A          337 EMIRADQINEAYERMLRGDVKYRFVIDNRTL  367 (369)
T ss_dssp             EEECGGGHHHHHHHHHTTCSSSEEEEEGGGG
T ss_pred             EEEcHHHHHHHHHHHHcCCCceEEEEecCCC
Confidence            8899999999999999988889999998764

>1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A

Probab=100.00  E-value=4.8e-57  Score=417.58  Aligned_cols=334  Identities=35%  Similarity=0.631  Sum_probs=281.4

Q ss_pred             cccceeeeeecCCCCCcccee--eccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYS--FNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~--~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      .+.+++++...+..+.+++++  ++.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|++++
T Consensus         3 ~p~~mka~~~~~~~~~l~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G~V~~vG~~v~   82 (360)
T 1piw_A            3 YPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPKSN   82 (360)
T ss_dssp             TTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTTCC
T ss_pred             CChheEEEEEecCCCCeeEEeccccCCCCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceEEEEEeCCCCC
Confidence            333455666554444688999  999999999999999999999999999988765556799999999999999999999


Q ss_pred             -CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           84 -RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        84 -~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                       +|++||+|++.+...+|++|.+|++|+++.|++....+.+....|....|+|+||+.+|++.++++|+++++++||+++
T Consensus        83 ~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~  162 (360)
T 1piw_A           83 SGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIPSHLAAPLL  162 (360)
T ss_dssp             SSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTSCHHHHGGGG
T ss_pred             CCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEECCCCCCHHHhhhhh
Confidence             9999999987766668999999999999999875111111111122456999999999999999999999999999999


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH-HHHHHh
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL-EQMKAL  241 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~-~~~~~~  241 (344)
                      +++.|||+++.+ ..+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|+++++++.+. +..+++
T Consensus       163 ~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~-~~lGa~~v~~~~~~~~~~~~~  240 (360)
T 1piw_A          163 CGGLTVYSPLVR-NGCGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADHYIATLEEGDWGEKY  240 (360)
T ss_dssp             THHHHHHHHHHH-TTCSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEEEGGGTSCHHHHS
T ss_pred             hhHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCCEEEcCcCchHHHHHh
Confidence            999999999987 456999999999999999999999999999999999999999888 68999999998765 555555


Q ss_pred             cCCccEEEECCCC--chhHHHHHHhcccCCEEEEEcCCCcc-ccCCceee----------eechHhHHHHHHHHHhCCCc
Q 019199          242 GKSLDFIIDTASG--DHPFDAYMSLLKVAGVYVLVGFPSKV-KFSPASLN----------IGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       242 ~~~~dvvid~~g~--~~~~~~~~~~l~~~G~iv~~g~~~~~-~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~  308 (344)
                      .+++|++||++|+  +..++.++++++++|+++.+|..... .++...+.          ....++++++++++++|+++
T Consensus       241 ~~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  320 (360)
T 1piw_A          241 FDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDIK  320 (360)
T ss_dssp             CSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHHHHHHHTTCC
T ss_pred             hcCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCCccccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCc
Confidence            5789999999998  56689999999999999999876322 22222211          22357899999999999999


Q ss_pred             cceEEEeCcc--HHHHHHHHHcCCcceEEEEEeCC
Q 019199          309 PQIETIPIEN--VNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       309 ~~~~~~~~~~--~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +.+++|++++  +++||+.+.+++..||+||++++
T Consensus       321 ~~i~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~  355 (360)
T 1piw_A          321 IWVETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD  355 (360)
T ss_dssp             CCEEEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred             ceEEEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence            8789999999  99999999998888999999865

>3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A*

Probab=100.00  E-value=1.4e-56  Score=411.54  Aligned_cols=323  Identities=29%  Similarity=0.487  Sum_probs=279.8

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCcccccceEEEEecCCCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++++.+.+.++++++++.+.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|++|
T Consensus         3 MkA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G~V~~vG~~v~~~~vG   82 (340)
T 3s2e_A            3 MKAAVVRAFGAPLTIDEVPVPQPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVGYVSAVGSGVSRVKEG   82 (340)
T ss_dssp             EEEEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECSSCCSCCTT
T ss_pred             eEEEEEecCCCCCEEEEccCCCCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceEEEEEECCCCCcCCCC
Confidence            344555444556999999999999999999999999999999999987763 5689999999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+|++.+....|+.|.+|++|+++.|.+....       |...+|+|+||+.+|++.++++|+++++++||++++++.||
T Consensus        83 drV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  155 (340)
T 3s2e_A           83 DRVGVPWLYSACGYCEHCLQGWETLCEKQQNT-------GYSVNGGYGEYVVADPNYVGLLPDKVGFVEIAPILCAGVTV  155 (340)
T ss_dssp             CEEEEESEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTSCHHHHGGGGTHHHHH
T ss_pred             CEEEecCCCCCCCCChHHhCcCcccCcccccc-------CCCCCCcceeEEEechHHEEECCCCCCHHHhhcccchhHHH
Confidence            99976555568999999999999999986432       23456999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhcCCc
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALGKSL  245 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~~~~  245 (344)
                      |+++... .+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+..   .+..+++
T Consensus       156 ~~~l~~~-~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~~~~g~~  233 (340)
T 3s2e_A          156 YKGLKVT-DTRPGQWVVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLA-RRLGAEVAVNARDTDPAAWLQKEIGGA  233 (340)
T ss_dssp             HHHHHTT-TCCTTSEEEEECCSTTHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEEEETTTSCHHHHHHHHHSSE
T ss_pred             HHHHHHc-CCCCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHcCCCEEEeCCCcCHHHHHHHhCCCC
Confidence            9999655 55999999999999999999999999999999999999999988 79999999998775433   2333689


Q ss_pred             cEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEE
Q 019199          246 DFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETI  314 (344)
Q Consensus       246 dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~  314 (344)
                      |++||++++...++.++++++++|+++.+|.. ....++...+.          ...+++++++++++++|++++.++.|
T Consensus       234 d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~  313 (340)
T 3s2e_A          234 HGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPGDFGTPIFDVVLKGITIRGSIVGTRSDLQESLDFAAHGDVKATVSTA  313 (340)
T ss_dssp             EEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEEEE
T ss_pred             CEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCCCCCCCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHhCCCCceEEEE
Confidence            99999999888899999999999999999976 33333322211          33467899999999999999988999


Q ss_pred             eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          315 PIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       315 ~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +++++++||+.+.+++..||+||++++
T Consensus       314 ~l~~~~~A~~~~~~~~~~Gkvvv~~~~  340 (340)
T 3s2e_A          314 KLDDVNDVFGRLREGKVEGRVVLDFSR  340 (340)
T ss_dssp             CGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred             eHHHHHHHHHHHHcCCCceEEEEecCC
Confidence            999999999999999999999999864

>3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana}

Probab=100.00  E-value=2.1e-55  Score=409.15  Aligned_cols=333  Identities=23%  Similarity=0.368  Sum_probs=278.4

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      .++++++++..++.+++++++++.|+|+++||||||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus         5 ~~~tmkA~v~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~v~~~   84 (378)
T 3uko_A            5 QVITCKAAVAYEPNKPLVIEDVQVAPPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAGIVESVGEGVTEV   84 (378)
T ss_dssp             SCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             cceeeEEEEEecCCCccEEEEecCCCCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceEEEEEeCCCCCcC
Confidence            44556677766555569999999999999999999999999999999999987767889999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCcccccc-cc---------ccCCC-----CccCCcceeEEEEecceEEEcC
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NA---------IDADG-----TITKGGYSSYIVVHERYCYKIA  150 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~---------~~~~~-----~~~~g~~~~~~~~~~~~~~~~P  150 (344)
                      ++||+|+..+. ..|++|.+|++|.++.|.+..... .+         ...+|     ....|+|+||+.++++.++++|
T Consensus        85 ~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP  163 (378)
T 3uko_A           85 QAGDHVIPCYQ-AECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTVVHDVSVAKID  163 (378)
T ss_dssp             CTTCEEEECSS-CCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECC
T ss_pred             CCCCEEEEecC-CCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEEechhheEECC
Confidence            99999987665 479999999999999999863210 01         00011     1124799999999999999999


Q ss_pred             CCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEE
Q 019199          151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKF  229 (344)
Q Consensus       151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~  229 (344)
                      +++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++++
T Consensus       164 ~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~q~a~~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~v  242 (378)
T 3uko_A          164 PTAPLDKVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGLGTVGLAVAEGAKTAGASRIIGIDIDSKKYETA-KKFGVNEF  242 (378)
T ss_dssp             TTSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECCSHHHHHHHHHHHHHTCSCEEEECSCTTHHHHH-HTTTCCEE
T ss_pred             CCCCHHHhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCcEE
Confidence            9999999999999999999999777778999999999999999999999999999 899999999999988 79999999


Q ss_pred             EeCC--CH---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC---CccccCCceee---------e-
Q 019199          230 VVSS--DL---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP---SKVKFSPASLN---------I-  289 (344)
Q Consensus       230 v~~~--~~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~---~~~~~~~~~~~---------~-  289 (344)
                      +++.  +.   +.+.+.+ +++|++||++|++.++..++++++++ |+++.+|..   ....++...+.         . 
T Consensus       243 i~~~~~~~~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~  322 (378)
T 3uko_A          243 VNPKDHDKPIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASGQEISTRPFQLVTGRVWKGTAFG  322 (378)
T ss_dssp             ECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGG
T ss_pred             EccccCchhHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCCCccccCHHHHhcCcEEEEEEec
Confidence            9876  32   2334443 58999999999987799999999996 999999975   22333332211         1 


Q ss_pred             --echHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          290 --GGTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       290 --~~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                        ...++++++++++.+|++++  .+ ++|+++++++||+.+.+++.. |+||++++
T Consensus       323 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~  378 (378)
T 3uko_A          323 GFKSRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK  378 (378)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred             CCCchHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence              13468999999999999974  44 899999999999999888865 99999864

>1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A*

Probab=100.00  E-value=1.7e-54  Score=402.40  Aligned_cols=334  Identities=24%  Similarity=0.359  Sum_probs=278.6

Q ss_pred             CCccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecC
Q 019199            1 MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      |++.+.+++++++...++.+.+++++++.|+|+++||||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|+
T Consensus         1 ~~~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~   79 (373)
T 1p0f_A            1 MCTAGKDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGA   79 (373)
T ss_dssp             -CCTTSCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECT
T ss_pred             CcccCCcceeEEEEEEcCCCCeeEEEeeCCCCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceEEEEEECC
Confidence            77778888899999876555789999999999999999999999999999999988765 56799999999999999999


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccc-cccCC-------------CCccCCcceeEEEEecceE
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN-AIDAD-------------GTITKGGYSSYIVVHERYC  146 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~-~~~~~-------------~~~~~g~~~~~~~~~~~~~  146 (344)
                      ++++|++||+|++.+. ..|++|.+|++|.++.|++....+. +...+             +....|+|+||+++|++.+
T Consensus        80 ~v~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~  158 (373)
T 1p0f_A           80 GVTCVKPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAV  158 (373)
T ss_dssp             TCCSCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSE
T ss_pred             CCCccCCCCEEEECCC-CCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEchhhE
Confidence            9999999999988765 4899999999999999987532110 11000             0113599999999999999


Q ss_pred             EEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC
Q 019199          147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG  225 (344)
Q Consensus       147 ~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g  225 (344)
                      +++|++++++ ||.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|
T Consensus       159 ~~iP~~l~~~-aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lG  236 (373)
T 1p0f_A          159 AKIDPKAPLE-SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELG  236 (373)
T ss_dssp             EEECTTCCGG-GGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTT
T ss_pred             EECCCCCChh-hhhhhhHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcC
Confidence            9999999999 999999999999998777777999999999999999999999999999 899999999999888 6999


Q ss_pred             CcEEEeCCC--H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC---ccccCCcee------e-
Q 019199          226 ADKFVVSSD--L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS---KVKFSPASL------N-  288 (344)
Q Consensus       226 ~~~~v~~~~--~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~------~-  288 (344)
                      +++++++++  .   +.+.+.+ +++|++||++|...++..++++++++ |+++.+|...   ...++...+      . 
T Consensus       237 a~~vi~~~~~~~~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g  316 (373)
T 1p0f_A          237 ATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKG  316 (373)
T ss_dssp             CSEEECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEE
T ss_pred             CcEEEecccccchHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCCCccccCHHHhccCceEEe
Confidence            999998763  2   2333443 58999999999877799999999999 9999999752   233333221      1 


Q ss_pred             --ee--chHhHHHHHHHHHhCCCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          289 --IG--GTKDTQEMLEYCAAHKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       289 --~~--~~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                        ..  ..++++++++++++|+++  +.+ ++|+++++++|++.+.+++. +|+||++
T Consensus       317 ~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 1p0f_A          317 SVFGGFKGEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY  373 (373)
T ss_dssp             CSGGGCCGGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred             eccCCcCHHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence              11  136899999999999997  344 89999999999999987774 7999874

>1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A

Probab=100.00  E-value=6.2e-55  Score=400.21  Aligned_cols=322  Identities=33%  Similarity=0.576  Sum_probs=275.9

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      +++...++.+.+++++++.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+++++|++||
T Consensus         2 ka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G~V~~vG~~v~~~~vGd   81 (339)
T 1rjw_A            2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGD   81 (339)
T ss_dssp             EEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTC
T ss_pred             eEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceEEEEEECCCCCcCCCCC
Confidence            3455544444688999999999999999999999999999999888654 346799999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|++.+...+|+.|.+|++|.++.|++....       |....|+|+||+.+|++.++++|+++++++||++++++.|||
T Consensus        82 rV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~  154 (339)
T 1rjw_A           82 RVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNLSFEEAAPIFCAGVTTY  154 (339)
T ss_dssp             EEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTSCHHHHGGGGTHHHHHH
T ss_pred             EEEEecCCCCCCCCchhhCcCcccCCCccee-------ecCCCCcceeeEEechHHEEECCCCCCHHHhhhhhhhHHHHH
Confidence            9988766557999999999999999875321       223569999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhcCCcc
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALGKSLD  246 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~~~~d  246 (344)
                      +++.+. .+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++.+++..+.+.   +.+.++++|
T Consensus       155 ~~l~~~-~~~~g~~VlV~GaG~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~d~~~~~~~~~~~~~~~~~d  232 (339)
T 1rjw_A          155 KALKVT-GAKPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNPLKEDAAKFMKEKVGGVH  232 (339)
T ss_dssp             HHHHHH-TCCTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEECTTTSCHHHHHHHHHSSEE
T ss_pred             HHHHhc-CCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHCCCCEEecCCCccHHHHHHHHhCCCC
Confidence            999877 56999999999998899999999999999999999999999888 6899999998765432   333336899


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEe
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIP  315 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~  315 (344)
                      ++||++|....+..++++++++|+++.+|.. ...+++...+.          ...+++++++++++++|++++.+++|+
T Consensus       233 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~~  312 (339)
T 1rjw_A          233 AAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKVKTIIEVQP  312 (339)
T ss_dssp             EEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSCCCCEEEEE
T ss_pred             EEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCCccCHHHHHhCCcEEEEeccCCHHHHHHHHHHHHcCCCCccEEEEc
Confidence            9999999877799999999999999999876 33333322211          234578999999999999998889999


Q ss_pred             CccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          316 IENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       316 ~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      ++++++|++.+.+++..||+|+++++
T Consensus       313 l~~~~~A~~~~~~~~~~gKvvi~~~~  338 (339)
T 1rjw_A          313 LEKINEVFDRMLKGQINGRVVLTLED  338 (339)
T ss_dssp             GGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCceEEEEecCC
Confidence            99999999999998888999999875

>4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A*

Probab=100.00  E-value=5.5e-55  Score=402.23  Aligned_cols=314  Identities=29%  Similarity=0.514  Sum_probs=277.1

Q ss_pred             CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEecc
Q 019199           17 DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTY   96 (344)
Q Consensus        17 ~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~   96 (344)
                      .+++.+++++.+.|+|++|||||||.|+|||++|++.++|.++ .++|.++|||++|+|+++|+++++|++||+|++.+.
T Consensus         9 ~~~~~~~l~e~~~P~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG~V~~vG~~V~~~~~GdrV~~~~~   87 (348)
T 4eez_A            9 NPDGYADLVEKELRAIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIGIVKEIGADVSSLQVGDRVSVAWF   87 (348)
T ss_dssp             SCCSSEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEEEEEEECTTCCSCCTTCEEEEESE
T ss_pred             CCCCcEEEEEeECCCCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEEEEEEECceeeecccCCeEeeccc
Confidence            3567789999999999999999999999999999999998876 568999999999999999999999999999999988


Q ss_pred             ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhcc
Q 019199           97 VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK  176 (344)
Q Consensus        97 ~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~  176 (344)
                      ...|+.|.+|..+..+.|......       +...+|+|+||+.++++.++++|+++++.+|+++++++.|||+++....
T Consensus        88 ~~~~g~~~~~~~~~~~~~~~~~~~-------~~~~~G~~ae~~~~~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~l~~~~  160 (348)
T 4eez_A           88 FEGCGHCEYCVSGNETFCREVKNA-------GYSVDGGMAEEAIVVADYAVKVPDGLDPIEASSITCAGVTTYKAIKVSG  160 (348)
T ss_dssp             EECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGSCBCCTTSCHHHHHHHHHHHHHHHHHHHHHT
T ss_pred             ccccCccccccCCccccccccccc-------ccccCCcceeeccccccceeecCCCCCHHHHhhcccceeeEEeeecccC
Confidence            889999999999999999876443       2346799999999999999999999999999999999999999997666


Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc--CCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG--KSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~--~~~dvvid  250 (344)
                      . ++|++|||+|+|++|.+++|+++.+ |++|++++++++|++.+ +++|+++++|+.+.+..   .+.+  .++|++++
T Consensus       161 ~-~~g~~VlV~GaG~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~-~~~Ga~~~i~~~~~~~~~~v~~~t~g~g~d~~~~  238 (348)
T 4eez_A          161 V-KPGDWQVIFGAGGLGNLAIQYAKNVFGAKVIAVDINQDKLNLA-KKIGADVTINSGDVNPVDEIKKITGGLGVQSAIV  238 (348)
T ss_dssp             C-CTTCEEEEECCSHHHHHHHHHHHHTSCCEEEEEESCHHHHHHH-HHTTCSEEEEC-CCCHHHHHHHHTTSSCEEEEEE
T ss_pred             C-CCCCEEEEEcCCCccHHHHHHHHHhCCCEEEEEECcHHHhhhh-hhcCCeEEEeCCCCCHHHHhhhhcCCCCceEEEE
Confidence            5 9999999999999999999999876 56999999999999888 79999999999875443   3343  57999999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCCCccceEEEeCccH
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQIETIPIENV  319 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~  319 (344)
                      ++++..++..++++++++|+++.+|.. ....++...+.          ...+++++++++++++|+++|.+++|+|+++
T Consensus       239 ~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~~~l~~~g~i~p~~~~~~l~~~  318 (348)
T 4eez_A          239 CAVARIAFEQAVASLKPMGKMVAVAVPNTEMTLSVPTVVFDGVEVAGSLVGTRLDLAEAFQFGAEGKVKPIVATRKLEEI  318 (348)
T ss_dssp             CCSCHHHHHHHHHTEEEEEEEEECCCCSCEEEECHHHHHHSCCEEEECCSCCHHHHHHHHHHHHTTSCCCCEEEECGGGH
T ss_pred             eccCcchhheeheeecCCceEEEEeccCCCCccCHHHHHhCCeEEEEEecCCHHHHHHHHHHHHcCCCEEEEEEEeHHHH
Confidence            999998899999999999999999976 33333322221          3456789999999999999998899999999


Q ss_pred             HHHHHHHHcCCcceEEEEEeC
Q 019199          320 NEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       320 ~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      ++|++.+.+++..||+||+++
T Consensus       319 ~~A~~~l~~g~~~GKvVl~~s  339 (348)
T 4eez_A          319 NDIIDEMKAGKIEGRMVIDFT  339 (348)
T ss_dssp             HHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHCCCCccEEEEEcc
Confidence            999999999999999999997

>1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-54  Score=401.77  Aligned_cols=332  Identities=23%  Similarity=0.354  Sum_probs=273.2

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      ||.+|+++++.+.+..+++++++++.|+|.++||+|||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|++++
T Consensus         1 ms~~~~mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~v~   79 (371)
T 1f8f_A            1 MSELKDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVT   79 (371)
T ss_dssp             ---CEEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCccccceEEEEcCCCCCeEEEEecCCCCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccceEEEEeCCCCC
Confidence            45566677888765555689999999999999999999999999999999988664 45799999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCcccc-ccccc------c---CCC------CccCCcceeEEEEecceEE
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVY-TFNAI------D---ADG------TITKGGYSSYIVVHERYCY  147 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~-~~~~~------~---~~~------~~~~g~~~~~~~~~~~~~~  147 (344)
                      +|++||+|++.+  .+|++|.+|++|.++.|++... .+.+.      .   .+|      ....|+|+||+.++++.++
T Consensus        80 ~~~~GdrV~~~~--~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey~~v~~~~~~  157 (371)
T 1f8f_A           80 ELQVGDHVVLSY--GYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTV  157 (371)
T ss_dssp             SCCTTCEEEECC--CCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEE
T ss_pred             CCCCCCEEEecC--CCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCeEEechhheE
Confidence            999999998877  5899999999999999987531 11100      0   011      0235899999999999999


Q ss_pred             EcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC
Q 019199          148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA  226 (344)
Q Consensus       148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~  226 (344)
                      ++|+++++++||++++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+
T Consensus       158 ~iP~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa  236 (371)
T 1f8f_A          158 KVTKDVPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGA  236 (371)
T ss_dssp             EECTTSCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTC
T ss_pred             ECCCCCCHHHHHHhcchHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEECCCHHHHHHH-HHcCC
Confidence            9999999999999999999999999766677999999999999999999999999999 799999999999888 78999


Q ss_pred             cEEEeCCCHH---HHHHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCceee------ee---
Q 019199          227 DKFVVSSDLE---QMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPASLN------IG---  290 (344)
Q Consensus       227 ~~~v~~~~~~---~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~~~------~~---  290 (344)
                      ++++++.+.+   .+.+.+ +++|++||++|.+..+..++++++++|+++.+|...   ...++...+.      .+   
T Consensus       237 ~~vi~~~~~~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~  316 (371)
T 1f8f_A          237 THVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVE  316 (371)
T ss_dssp             SEEEETTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSG
T ss_pred             CEEecCCccCHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCCCccccCHHHHHhCCCEEEEeCC
Confidence            9999987643   333333 479999999998777999999999999999998762   2233322211      11   


Q ss_pred             ----chHhHHHHHHHHHhCCCcc--ceEEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          291 ----GTKDTQEMLEYCAAHKIYP--QIETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       291 ----~~~~~~~~~~~~~~g~~~~--~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                          ..++++++++++++|++++  .+..|+++++++|++.+.+++. +|+||+++
T Consensus       317 ~~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~l~~~~~A~~~~~~~~~-~Kvvv~~~  371 (371)
T 1f8f_A          317 GSGSPKKFIPELVRLYQQGKFPFDQLVKFYAFDEINQAAIDSRKGIT-LKPIIKIA  371 (371)
T ss_dssp             GGSCHHHHHHHHHHHHHTTSCCGGGGEEEEEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred             CCCchHHHHHHHHHHHHcCCCCcccceeEecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence                1367899999999999975  3533999999999999998875 79999863

>1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A*

Probab=100.00  E-value=4.7e-54  Score=399.91  Aligned_cols=333  Identities=22%  Similarity=0.346  Sum_probs=276.0

Q ss_pred             ccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCC
Q 019199            3 SETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      +.+.+|+++++...++.+.+++++++.|+|.++||+|||.++|||++|++.+.|. +...+|.++|||++|+|+++|+++
T Consensus         2 ~~~~p~~mka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G~V~~vG~~v   80 (376)
T 1e3i_A            2 TQGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAGIVESVGPGV   80 (376)
T ss_dssp             CTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEEEEEEECTTC
T ss_pred             CCCCChheeEEEEecCCCCeEEEEeeCCCCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccEEEEEECCCC
Confidence            3467788888888765557899999999999999999999999999999998886 445689999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccc----ccc-ccccCCC-------------CccCCcceeEEEEecc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSV----YTF-NAIDADG-------------TITKGGYSSYIVVHER  144 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~----~~~-~~~~~~~-------------~~~~g~~~~~~~~~~~  144 (344)
                      ++|++||||++.+.. .|++|.+|++|.++.|++..    ... .+...++             ....|+|+||+++|++
T Consensus        81 ~~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~  159 (376)
T 1e3i_A           81 TNFKPGDKVIPFFAP-QCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEA  159 (376)
T ss_dssp             CSCCTTCEEEECSSC-CCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGG
T ss_pred             ccCCCCCEEEECCcC-CCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCccceeEEEeccc
Confidence            999999999887654 89999999999999998753    100 0111011             0124899999999999


Q ss_pred             eEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHh
Q 019199          145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSL  223 (344)
Q Consensus       145 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~  223 (344)
                      .++++|+++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ ++
T Consensus       160 ~~~~iP~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~  238 (376)
T 1e3i_A          160 NLARVDDEANLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KA  238 (376)
T ss_dssp             GEEECCTTCCHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HH
T ss_pred             cEEECCCCCCHHHhhhhccHHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HH
Confidence            9999999999999999999999999998777777999999999999999999999999999 899999999999888 69


Q ss_pred             CCCcEEEeCCC--H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-CccccCCc------eee-
Q 019199          224 LGADKFVVSSD--L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SKVKFSPA------SLN-  288 (344)
Q Consensus       224 ~g~~~~v~~~~--~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~~~~~~~------~~~-  288 (344)
                      +|+++++++++  .   +.+.+.+ +++|++||++|...++..++++++++ |+++.+|.. ....++..      .+. 
T Consensus       239 lGa~~vi~~~~~~~~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~i~g  318 (376)
T 1e3i_A          239 LGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSING  318 (376)
T ss_dssp             TTCSEEECGGGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEE
T ss_pred             hCCcEEEccccccchHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCCccccCHHHhhccCeEEE
Confidence            99999998763  2   2333332 58999999999877799999999999 999999875 22222221      111 


Q ss_pred             --ee---chHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          289 --IG---GTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       289 --~~---~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                        ..   ..++++++++++++|++++  .+ ++|+++++++|++.+.+++ .+|+||++
T Consensus       319 ~~~~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~  376 (376)
T 1e3i_A          319 TFFGGWKSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF  376 (376)
T ss_dssp             CSGGGCCHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred             EecCCCCcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence              11   2467999999999999973  44 8999999999999998877 47999874

>3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A*

Probab=100.00  E-value=2.6e-54  Score=397.18  Aligned_cols=322  Identities=25%  Similarity=0.362  Sum_probs=274.6

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC--CCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--DSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      +++.+.++.+.+++++++.|+|++|||||||.++|||++|++.+.|..+  ...+|.++|||++|+|+++|+++++|++|
T Consensus         2 kA~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vG   81 (345)
T 3jv7_A            2 KAVQYTEIGSEPVVVDIPTPTPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVGTVAELGEGVTGFGVG   81 (345)
T ss_dssp             EEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEEEEEEECTTCCSCCTT
T ss_pred             eEEEEcCCCCceEEEEecCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEEEEEEECCCCCCCCCC
Confidence            4555554445589999999999999999999999999999999988754  35678999999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCC-ccccccccccCCCCccCCcceeEEEEe-cceEEEcCCCCCcccccccchhhh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCA-RSVYTFNAIDADGTITKGGYSSYIVVH-ERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~-~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      |+|++.+.. .|+.|.+|++|.++.|. +....+.+   .|...+|+|+||+.++ ++.++++|+ +++++||++++++.
T Consensus        82 drV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~~~~~---~g~~~~G~~aey~~v~~~~~~~~~p~-~~~~~aa~l~~~~~  156 (345)
T 3jv7_A           82 DAVAVYGPW-GCGACHACARGRENYCTRAADLGITP---PGLGSPGSMAEYMIVDSARHLVPIGD-LDPVAAAPLTDAGL  156 (345)
T ss_dssp             CEEEECCSC-CCSSSHHHHTTCGGGCSSHHHHTCCC---BTTTBCCSSBSEEEESCGGGEEECTT-CCHHHHGGGGTTTH
T ss_pred             CEEEEecCC-CCCCChHHHCcCcCcCcccccccccc---CCcCCCceeeEEEEecchhceEeCCC-CCHHHhhhhhhhHH
Confidence            999887764 89999999999999994 33322221   1234579999999999 999999999 99999999999999


Q ss_pred             HhHHHHHh-ccCCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HHHHHhc
Q 019199          167 TVYTPMMR-HKMNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQMKALG  242 (344)
Q Consensus       167 ta~~~l~~-~~~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~~~  242 (344)
                      |||+++.+ ...+++|++|||+|+|++|++++|+|+.+ +++|++++.++++++.+ +++|+++++++++.  +.+.+.+
T Consensus       157 ta~~~l~~~~~~~~~g~~vlv~GaG~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~v~~~t  235 (345)
T 3jv7_A          157 TPYHAISRVLPLLGPGSTAVVIGVGGLGHVGIQILRAVSAARVIAVDLDDDRLALA-REVGADAAVKSGAGAADAIRELT  235 (345)
T ss_dssp             HHHHHHHTTGGGCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESCHHHHHHH-HHTTCSEEEECSTTHHHHHHHHH
T ss_pred             HHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCCEEEcCCCcHHHHHHHHh
Confidence            99999998 45669999999999999999999999999 66999999999999988 79999999988652  2333333


Q ss_pred             --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C-ccccCCceee----------eechHhHHHHHHHHHhCCCc
Q 019199          243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-KVKFSPASLN----------IGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~-~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~  308 (344)
                        +++|++||++|++.+++.++++++++|+++.+|.. . ...++. .+.          ....++++++++++++|+++
T Consensus       236 ~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~-~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~  314 (345)
T 3jv7_A          236 GGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAHAKVGF-FMIPFGASVVTPYWGTRSELMEVVALARAGRLD  314 (345)
T ss_dssp             GGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCCEEEST-TTSCTTCEEECCCSCCHHHHHHHHHHHHTTCCC
T ss_pred             CCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCcCH-HHHhCCCEEEEEecCCHHHHHHHHHHHHcCCCc
Confidence              48999999999986799999999999999999976 3 444442 221          33457899999999999999


Q ss_pred             cceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          309 PQIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       309 ~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.+++|+++++++|++.+.+++..||+||.+
T Consensus       315 ~~~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p  345 (345)
T 3jv7_A          315 IHTETFTLDEGPAAYRRLREGSIRGRGVVVP  345 (345)
T ss_dssp             CCEEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred             eEEEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence            9889999999999999999999999999863

>1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1e-54  Score=401.74  Aligned_cols=319  Identities=25%  Similarity=0.407  Sum_probs=270.9

Q ss_pred             ceeeeeecCCCCCccceeeccCC-CCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRA-VGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      +++++...+..+.+++++++.|+ |++|||+|||.++|||++|++.+.|..+   ...+|.++|||++|+|+++|+++++
T Consensus        15 ~mka~~~~~~g~~l~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~   94 (359)
T 1h2b_A           15 RLKAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEG   94 (359)
T ss_dssp             --CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCS
T ss_pred             hceEEEEecCCCCcEEEEccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceEEEEEECCCCCC
Confidence            34555555444468899999999 9999999999999999999999988654   3467999999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccc---cc
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAA---PL  161 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa---~l  161 (344)
                      |++||+|+.++. ..|++|.+|++|.++.|++....       |....|+|+||+.+|++.++++|+++++++||   ++
T Consensus        95 ~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~l  166 (359)
T 1h2b_A           95 LEKGDPVILHPA-VTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDISREKLVEMAPL  166 (359)
T ss_dssp             CCTTCEEEECSC-BCCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCHHHHHHTGGG
T ss_pred             CCCCCEEEeCCC-CCCCCChhhhCcCcccCCCcccc-------ccCCCCcccceEEechHhEEECCCCCCHHHHhhccch
Confidence            999999976554 48999999999999999876321       22356999999999999999999999999999   89


Q ss_pred             chhhhHhHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--HH
Q 019199          162 LCAGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--EQ  237 (344)
Q Consensus       162 ~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--~~  237 (344)
                      ++++.|||+++.+. ..+++|++|||+|+|++|++++|+|+.+ |++|+++++++++++.+ +++|+++++|+++.  +.
T Consensus       167 ~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~  245 (359)
T 1h2b_A          167 ADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADHVVDARRDPVKQ  245 (359)
T ss_dssp             GTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSEEEETTSCHHHH
T ss_pred             hhhHHHHHHHHHhhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH-HHhCCCEEEeccchHHHH
Confidence            99999999999884 5669999999999999999999999999 99999999999999888 69999999998765  33


Q ss_pred             HHHhc--CCccEEEECCCCch--hHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHH
Q 019199          238 MKALG--KSLDFIIDTASGDH--PFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYC  302 (344)
Q Consensus       238 ~~~~~--~~~dvvid~~g~~~--~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~  302 (344)
                      +.+++  +++|++||++|++.  ++..++++  ++|+++.+|.. .. .++...+.          ....++++++++++
T Consensus       246 v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~  322 (359)
T 1h2b_A          246 VMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-RFPTIRVISSEVSFEGSLVGNYVELHELVTLA  322 (359)
T ss_dssp             HHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-CCCHHHHHHTTCEEEECCSCCHHHHHHHHHHH
T ss_pred             HHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-CCCHHHHHhCCcEEEEecCCCHHHHHHHHHHH
Confidence            44444  37999999999985  68888888  99999999976 22 33322211          22457899999999


Q ss_pred             HhCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          303 AAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       303 ~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++|++++.+++|+++++++|++.+.+++..||+|+++
T Consensus       323 ~~g~l~~~i~~~~l~~~~~A~~~~~~~~~~gKvvv~~  359 (359)
T 1h2b_A          323 LQGKVRVEVDIHKLDEINDVLERLEKGEVLGRAVLIP  359 (359)
T ss_dssp             HTTSCCCCEEEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred             HcCCCcceEEEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence            9999998779999999999999999988889999874

>2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ...

Probab=100.00  E-value=1.8e-53  Score=395.70  Aligned_cols=332  Identities=23%  Similarity=0.352  Sum_probs=275.6

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      ...+++++++...+..+.+++++++.|+|.++||+|||.++|||++|++.+.|..+. .+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~mkA~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~-~~P~v~GhE~~G~V~~vG~~v~   81 (374)
T 2jhf_A            3 AGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGIVESIGEGVT   81 (374)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSCC-CSSBCCCCSEEEEEEEECTTCC
T ss_pred             CCCceeEEEEEEecCCCceEEEEccCCCCCCCeEEEEEeEEeechhhHHHHcCCCCC-CCCcccCcCceEEEEEECCCCC
Confidence            345677888887765557899999999999999999999999999999999887653 3799999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccc-cccCCC-------------CccCCcceeEEEEecceEEEc
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN-AIDADG-------------TITKGGYSSYIVVHERYCYKI  149 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~-~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~  149 (344)
                      +|++||||++.+. ..|++|.+|++|.++.|++...... +...++             ....|+|+||+.+|++.++++
T Consensus        82 ~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i  160 (374)
T 2jhf_A           82 TVRPGDKVIPLFT-PQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVAKI  160 (374)
T ss_dssp             SCCTTCEEEECSS-CCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEEEC
T ss_pred             CCCCCCEEEECCC-CCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEchHHeEEC
Confidence            9999999988765 4899999999999999987532110 110010             012599999999999999999


Q ss_pred             CCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE
Q 019199          150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK  228 (344)
Q Consensus       150 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~  228 (344)
                      |+++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++
T Consensus       161 P~~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~  239 (374)
T 2jhf_A          161 DAASPLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATE  239 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSE
T ss_pred             CCCCCHHHhhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCce
Confidence            99999999999999999999998777777999999999999999999999999999 899999999999888 6999999


Q ss_pred             EEeCCC--H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC---ccccCCcee------e---e
Q 019199          229 FVVSSD--L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS---KVKFSPASL------N---I  289 (344)
Q Consensus       229 ~v~~~~--~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~------~---~  289 (344)
                      ++++++  .   +.+.+.+ +++|++||++|.+.++..++++++++ |+++.+|...   ...++...+      .   .
T Consensus       240 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~  319 (374)
T 2jhf_A          240 CVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIF  319 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSG
T ss_pred             EecccccchhHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCCCccccCHHHHhcCCeEEEecc
Confidence            998763  2   2333433 58999999999977799999999999 9999999752   233332221      1   1


Q ss_pred             e---chHhHHHHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          290 G---GTKDTQEMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       290 ~---~~~~~~~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      .   ..++++++++++++|++++  .+ ++|+++++++|++.+.+++. +|+||++
T Consensus       320 ~~~~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~  374 (374)
T 2jhf_A          320 GGFKSKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF  374 (374)
T ss_dssp             GGCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCCChHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence            1   1467999999999999974  44 89999999999999988774 7999874

>2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A*

Probab=100.00  E-value=1e-53  Score=397.20  Aligned_cols=331  Identities=23%  Similarity=0.340  Sum_probs=274.9

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      ++|+++++...++.+.+++++++.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|
T Consensus         3 ~p~~mkA~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G~V~~vG~~V~~~   82 (373)
T 2fzw_A            3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (373)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CccceEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccEEEEEECCCCCCC
Confidence            45667777776555578999999999999999999999999999999998876555689999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccc-cccCC-------------CCccCCcceeEEEEecceEEEcCC
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN-AIDAD-------------GTITKGGYSSYIVVHERYCYKIAN  151 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~-~~~~~-------------~~~~~g~~~~~~~~~~~~~~~~P~  151 (344)
                      ++||+|++.+.. .|++|.+|++|.++.|++....+. +...+             +....|+|+||+++|++.++++|+
T Consensus        83 ~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~iP~  161 (373)
T 2fzw_A           83 KAGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (373)
T ss_dssp             CTTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEECCCC-CCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEchhheEECCC
Confidence            999999887654 799999999999999987532100 11000             111358999999999999999999


Q ss_pred             CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEE
Q 019199          152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFV  230 (344)
Q Consensus       152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v  230 (344)
                      ++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++
T Consensus       162 ~l~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~avqla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~vi  240 (373)
T 2fzw_A          162 LAPLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGATECI  240 (373)
T ss_dssp             TSCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCSEEE
T ss_pred             CCCHHHHhhhccHHHHHHHHHHhhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHcCCceEe
Confidence            999999999999999999998777777999999999999999999999999999 899999999999888 689999999


Q ss_pred             eCCC--H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC---ccccCCcee------e---ee-
Q 019199          231 VSSD--L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS---KVKFSPASL------N---IG-  290 (344)
Q Consensus       231 ~~~~--~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~---~~~~~~~~~------~---~~-  290 (344)
                      ++++  .   +.+.+.+ +++|++||++|...++..++++++++ |+++.+|...   ...++...+      .   .. 
T Consensus       241 ~~~~~~~~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~  320 (373)
T 2fzw_A          241 NPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGG  320 (373)
T ss_dssp             CGGGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGG
T ss_pred             ccccccccHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCCceeeeCHHHHhcCCEEEEeccCC
Confidence            8763  2   2333443 58999999999877799999999999 9999999752   233333221      1   11 


Q ss_pred             --chHhHHHHHHHHHhCCCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          291 --GTKDTQEMLEYCAAHKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       291 --~~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                        ..++++++++++++|+++  +.+ ++|+++++++|++.+.+++. +|+||++
T Consensus       321 ~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  373 (373)
T 2fzw_A          321 WKSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI  373 (373)
T ss_dssp             CCHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred             CCcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence              246799999999999997  445 89999999999999998875 7999874

>2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus}

Probab=100.00  E-value=1.6e-54  Score=398.32  Aligned_cols=318  Identities=27%  Similarity=0.375  Sum_probs=251.8

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC--CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ++++...+..+.+++++.+.|+|+++||+|||.++|||++|++.+.|..+  ...+|.++|||++|+|+++|++ ++|++
T Consensus         4 mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G~V~~vG~~-~~~~~   82 (344)
T 2h6e_A            4 SKAALLKKFSEPLSIEDVNIPEPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAGTIVEVGEL-AKVKK   82 (344)
T ss_dssp             EEBCEECSCCC-----EEEECCCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEEEEEEECTT-CCCCT
T ss_pred             eEEEEEecCCCCCeEEEeeCCCCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceEEEEEECCC-CCCCC
Confidence            34555544445688999999999999999999999999999999988765  3467999999999999999999 99999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEe-cceEEEcCCCCCcccccccchhhh
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVH-ERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      ||+|+..+. ..|++|.+|++|.++.|++....       |....|+|+||+++| ++.++++ +++++++||++++++.
T Consensus        83 GdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~l~~~~aa~l~~~~~  153 (344)
T 2h6e_A           83 GDNVVVYAT-WGDLTCRYCREGKFNICKNQIIP-------GQTTNGGFSEYMLVKSSRWLVKL-NSLSPVEAAPLADAGT  153 (344)
T ss_dssp             TCEEEECSC-BCCSCSTTGGGTCGGGCTTCBCB-------TTTBCCSSBSEEEESCGGGEEEE-SSSCHHHHGGGGTHHH
T ss_pred             CCEEEECCC-CCCCCChhhhCCCcccCCCcccc-------ccccCCcceeeEEecCcccEEEe-CCCCHHHhhhhhhhhH
Confidence            999966543 47999999999999999875321       223569999999999 9999999 9999999999999999


Q ss_pred             HhHHHHHhc----cCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HHHHH
Q 019199          167 TVYTPMMRH----KMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQMK  239 (344)
Q Consensus       167 ta~~~l~~~----~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~~  239 (344)
                      |||+++...    ..+ +|++|||+|+|++|++++|+|+.+  |++|+++++++++++.+ +++|+++++++++ .+...
T Consensus       154 ta~~al~~~~~~~~~~-~g~~VlV~GaG~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~  231 (344)
T 2h6e_A          154 TSMGAIRQALPFISKF-AEPVVIVNGIGGLAVYTIQILKALMKNITIVGISRSKKHRDFA-LELGADYVSEMKDAESLIN  231 (344)
T ss_dssp             HHHHHHHHHHHHHTTC-SSCEEEEECCSHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHH-HHHTCSEEECHHHHHHHHH
T ss_pred             HHHHHHHhhhhcccCC-CCCEEEEECCCHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHH-HHhCCCEEeccccchHHHH
Confidence            999999877    366 999999999999999999999999  99999999999999888 6899999998776 55555


Q ss_pred             Hhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHHHHHHhCC
Q 019199          240 ALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEMLEYCAAHK  306 (344)
Q Consensus       240 ~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~  306 (344)
                      +++  +++|++||++|.+.+++.++++++++|+++.+|.. ....++...+.          ....++++++++++.+|+
T Consensus       232 ~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  311 (344)
T 2h6e_A          232 KLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKRVSLEAFDTAVWNKKLLGSNYGSLNDLEDVVRLSESGK  311 (344)
T ss_dssp             HHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTS
T ss_pred             HhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCCcccCHHHHhhCCcEEEEEecCCHHHHHHHHHHHHcCC
Confidence            553  37999999999986699999999999999999976 33333322211          223578999999999999


Q ss_pred             CccceEEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          307 IYPQIETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       307 ~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +++.+++|+++++++|++.+.+++..||+||++
T Consensus       312 i~~~i~~~~l~~~~~A~~~~~~~~~~gKvvl~~  344 (344)
T 2h6e_A          312 IKPYIIKVPLDDINKAFTNLDEGRVDGRQVITP  344 (344)
T ss_dssp             SCCCEEEECC----------------CEEEECC
T ss_pred             CCcceEEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence            988679999999999999999888889999863

>1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.2e-53  Score=395.14  Aligned_cols=331  Identities=24%  Similarity=0.401  Sum_probs=274.6

Q ss_pred             ccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhh-hhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199            5 TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVI-WTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      ..+++++++...+..+++++++++.|+|.++||+|||.++|||++|++ .+.|..+ ..+|.++|||++|+|+++|++++
T Consensus         4 ~~~~~mka~~~~~~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G~V~~vG~~V~   82 (374)
T 1cdo_A            4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAGIVESVGPGVT   82 (374)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEEEEEEECTTCC
T ss_pred             CCcceeEEEEEecCCCCeEEEEeeCCCCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceEEEEEECCCCc
Confidence            456677788876555568999999999999999999999999999999 8888655 56799999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccc-cccCCCC-------------ccCCcceeEEEEecceEEEc
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN-AIDADGT-------------ITKGGYSSYIVVHERYCYKI  149 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~-~~~~~~~-------------~~~g~~~~~~~~~~~~~~~~  149 (344)
                      +|++||+|++.+.. .|++|.+|++|+++.|++....+. +...++.             ...|+|+||+++|++.++++
T Consensus        83 ~~~vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~  161 (374)
T 1cdo_A           83 EFQPGEKVIPLFIS-QCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKI  161 (374)
T ss_dssp             SCCTTCEEEECSSC-CCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEEC
T ss_pred             cCCCCCEEEeCCCC-CCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEEchhheEEC
Confidence            99999999887654 799999999999999987532110 1111110             12489999999999999999


Q ss_pred             CCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE
Q 019199          150 ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK  228 (344)
Q Consensus       150 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~  228 (344)
                      |+++++++||.+++++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++
T Consensus       162 P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~  240 (374)
T 1cdo_A          162 DPSAPLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATD  240 (374)
T ss_dssp             CTTCCHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCE
T ss_pred             CCCCCHHHHhhhccHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHhCCce
Confidence            99999999999999999999998777777999999999999999999999999999 899999999999888 6999999


Q ss_pred             EEeCCC--H---HHHHHhc-CCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCCC--ccccCCcee------e---ee
Q 019199          229 FVVSSD--L---EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFPS--KVKFSPASL------N---IG  290 (344)
Q Consensus       229 ~v~~~~--~---~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~~--~~~~~~~~~------~---~~  290 (344)
                      ++++.+  .   +.+.+.+ +++|++||++|....+..++++++++ |+++.+|...  ...++...+      .   ..
T Consensus       241 vi~~~~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  320 (374)
T 1cdo_A          241 FVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFG  320 (374)
T ss_dssp             EECGGGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGG
T ss_pred             EEeccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCCCcccCHHHHhcCCeEEEEecC
Confidence            998763  1   2233332 58999999999877799999999999 9999999762  333332211      1   11


Q ss_pred             ---chHhHHHHHHHHHhCCCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          291 ---GTKDTQEMLEYCAAHKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       291 ---~~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                         ..++++++++++++|+++  +.+ ++|+++++++||+.+.+++. +|+||++
T Consensus       321 ~~~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~  374 (374)
T 1cdo_A          321 GFKGKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL  374 (374)
T ss_dssp             GCCHHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred             CCCcHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence               246799999999999997  445 89999999999999988875 7999875

>2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae}

Probab=100.00  E-value=9e-54  Score=393.80  Aligned_cols=322  Identities=27%  Similarity=0.446  Sum_probs=273.2

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++++.+.++.+.+++++++.|+|+++||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+++++|++|
T Consensus         6 mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~G   85 (347)
T 2hcy_A            6 QKGVIFYESHGKLEYKDIPVPKPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAGVVVGMGENVKGWKIG   85 (347)
T ss_dssp             EEEEEESSTTCCCEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEEEEEEECTTCCSCCTT
T ss_pred             cEEEEEeCCCCCCEEEEeeCCCCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceEEEEEECCCCCCCcCC
Confidence            34555544444689999999999999999999999999999999888654 34678999999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+|++.+...+|+.|.+|++|.++.|++....       |....|+|+||+.+|++.++++|+++++++||++++++.||
T Consensus        86 drV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta  158 (347)
T 2hcy_A           86 DYAGIKWLNGSCMACEYCELGNESNCPHADLS-------GYTHDGSFQQYATADAVQAAHIPQGTDLAQVAPILCAGITV  158 (347)
T ss_dssp             CEEEECSEEECCSSSTTTTTTCGGGCTTCEEB-------TTTBCCSSBSEEEEETTTSEEECTTCCHHHHGGGGTHHHHH
T ss_pred             CEEEEecCCCCCCCChhhhCCCcccCcccccc-------ccCCCCcceeEEEeccccEEECCCCCCHHHHHHHhhhHHHH
Confidence            99988766567999999999999999876321       22356999999999999999999999999999999999999


Q ss_pred             HHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HH---HHHHhc-
Q 019199          169 YTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LE---QMKALG-  242 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~---~~~~~~-  242 (344)
                      |+++.+. .+++|++|||+|+ |++|++++++++..|++|+++++++++++.+ +++|++.++|..+ .+   .+.+.. 
T Consensus       159 ~~~l~~~-~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~  236 (347)
T 2hcy_A          159 YKALKSA-NLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELF-RSIGGEVFIDFTKEKDIVGAVLKATD  236 (347)
T ss_dssp             HHHHHTT-TCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHH-HHTTCCEEEETTTCSCHHHHHHHHHT
T ss_pred             HHHHHhc-CCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHH-HHcCCceEEecCccHhHHHHHHHHhC
Confidence            9999877 5699999999998 9999999999999999999999999888777 6899998888663 22   233332 


Q ss_pred             CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee----------eechHhHHHHHHHHHhCCCccc
Q 019199          243 KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQ  310 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~  310 (344)
                      +++|++||++|....++.++++++++|+++.+|...  ..+++...+.          ....++++++++++++|++++.
T Consensus       237 ~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~  316 (347)
T 2hcy_A          237 GGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGAKCCSDVFNQVVKSISIVGSYVGNRADTREALDFFARGLVKSP  316 (347)
T ss_dssp             SCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTCEEEEEHHHHHHTTCEEEECCCCCHHHHHHHHHHHHTTSCCCC
T ss_pred             CCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCCCCCCCHHHHhhCCcEEEEccCCCHHHHHHHHHHHHhCCCccc
Confidence            379999999998667999999999999999998762  2233222211          2245789999999999999988


Q ss_pred             eEEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          311 IETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       311 ~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      +++|+++++++||+.+.+++..||+|++++
T Consensus       317 ~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  346 (347)
T 2hcy_A          317 IKVVGLSTLPEIYEKMEKGQIVGRYVVDTS  346 (347)
T ss_dssp             EEEEEGGGHHHHHHHHHTTCCSSEEEEESC
T ss_pred             eEEEcHHHHHHHHHHHHcCCcceeEEEecC
Confidence            899999999999999999888899999876

>4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A*

Probab=100.00  E-value=9.1e-54  Score=396.67  Aligned_cols=320  Identities=20%  Similarity=0.299  Sum_probs=269.2

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      .++++++. .++.+++++++.|+|++|||+|||.|+|||++|++.+.|..+ ..+|.++|||++|+|+++|+++++|++|
T Consensus        23 ~mkA~v~~-~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~p~v~G~e~~G~V~~vG~~v~~~~vG  100 (370)
T 4ej6_A           23 MMKAVRLE-SVGNISVRNVGIPEPGPDDLLVKVEACGICGTDRHLLHGEFP-STPPVTLGHEFCGIVVEAGSAVRDIAPG  100 (370)
T ss_dssp             EEEEEEEE-ETTEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSEECCCSEEEEEEEECTTCCSSCTT
T ss_pred             heEEEEEe-cCCceEEEEccCCCCCCCeEEEEEEEEeecHHHHHHHcCCCC-CCCCeecCcceEEEEEEECCCCCCCCCC
Confidence            34555554 346799999999999999999999999999999999998763 5679999999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+|++.+. ..|+.|.+|++|.++.|.+....       |...+|+|+||++++++.++++|+++++++|| ++.++.||
T Consensus       101 drV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa-l~~~~~ta  171 (370)
T 4ej6_A          101 ARITGDPN-ISCGRCPQCQAGRVNLCRNLRAI-------GIHRDGGFAEYVLVPRKQAFEIPLTLDPVHGA-FCEPLACC  171 (370)
T ss_dssp             CEEEECCE-ECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCTTGGG-GHHHHHHH
T ss_pred             CEEEECCC-CCCCCChHHhCcCcccCCCcccc-------CCCCCCcceEEEEEchhhEEECCCCCCHHHHh-hhhHHHHH
Confidence            99988776 48999999999999999986432       22357999999999999999999999999998 77899999


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---H---h
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---A---L  241 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~---~  241 (344)
                      |+++.. ..+++|++|||+|+|++|++++|+|+.+|+ +|++++.++++++.+ +++|++.++++++.+..+   +   .
T Consensus       172 ~~~l~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~i~~~~~~  249 (370)
T 4ej6_A          172 LHGVDL-SGIKAGSTVAILGGGVIGLLTVQLARLAGATTVILSTRQATKRRLA-EEVGATATVDPSAGDVVEAIAGPVGL  249 (370)
T ss_dssp             HHHHHH-HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSEEECTTSSCHHHHHHSTTSS
T ss_pred             HHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCEEECCCCcCHHHHHHhhhhc
Confidence            999954 455999999999999999999999999999 899999999998887 789999999987654433   2   2


Q ss_pred             -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCceee---------eechHhHHHHHHHHHhCCCc
Q 019199          242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASLN---------IGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~~~~---------~~~~~~~~~~~~~~~~g~~~  308 (344)
                       .+++|++||++|...++..++++++++|+++.+|.. .  ...++...+.         +...++++++++++++|+++
T Consensus       250 ~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g~i~  329 (370)
T 4ej6_A          250 VPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQGEKVEIEPFDILFRELRVLGSFINPFVHRRAADLVATGAIE  329 (370)
T ss_dssp             STTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTTCCCCCCHHHHHHTTCEEEECCSCTTCHHHHHHHHHTTCSC
T ss_pred             cCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCCCccccCHHHHHhCCcEEEEeccChHHHHHHHHHHHcCCCC
Confidence             248999999999877799999999999999999976 2  3334433222         22346799999999999995


Q ss_pred             --cce-EEEeCccHHHHHHHHHcCCc-ceEEEEEeCC
Q 019199          309 --PQI-ETIPIENVNEALERLIKRDV-KYRFVIDIQN  341 (344)
Q Consensus       309 --~~~-~~~~~~~~~~a~~~~~~~~~-~gkvvi~~~~  341 (344)
                        +.+ ++|+++++++|++.+.+++. .+|+++++++
T Consensus       330 ~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~~  366 (370)
T 4ej6_A          330 IDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAER  366 (370)
T ss_dssp             CGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC---
T ss_pred             hhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEcccc
Confidence              445 89999999999999988774 4788887753

>1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A

Probab=100.00  E-value=4.4e-53  Score=390.46  Aligned_cols=324  Identities=21%  Similarity=0.305  Sum_probs=268.2

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-C--CCCCCCCcccccceEEEEecCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-G--DSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      +|+++++.+.+ ++.+++++.+.|+|+++||+|||.++|||++|++.+.+.. .  ...+|.++|||++|+|+++|++++
T Consensus         5 ~~~mka~~~~~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~V~   83 (356)
T 1pl8_A            5 KPNNLSLVVHG-PGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVK   83 (356)
T ss_dssp             CCCCEEEEEEE-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCC
T ss_pred             ccCceEEEEec-CCcEEEEEccCCCCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEEEEEEECCCCC
Confidence            35566666654 5678899999999999999999999999999999887432 1  135689999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccch
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLC  163 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~  163 (344)
                      +|++||||++.+.. .|++|.+|++|+++.|++..+.  +.    ....|+|+||+.+|++.++++|+++++++||.+ .
T Consensus        84 ~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~----~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~~-~  155 (356)
T 1pl8_A           84 HLKPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFC--AT----PPDDGNLCRFYKHNAAFCYKLPDNVTFEEGALI-E  155 (356)
T ss_dssp             SCCTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEET--TB----TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHHH-H
T ss_pred             CCCCCCEEEEeccC-CCCCChHHHCcCcccCCCcccc--Cc----CCCCCccccEEEeehHHEEECcCCCCHHHHHhh-c
Confidence            99999999887765 7999999999999999976431  11    024699999999999999999999999999855 5


Q ss_pred             hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC---CHHHHH
Q 019199          164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS---DLEQMK  239 (344)
Q Consensus       164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~---~~~~~~  239 (344)
                      ++.|||+++.. ..+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++++++++   +.+..+
T Consensus       156 ~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~~~~~~~~~~  233 (356)
T 1pl8_A          156 PLSVGIHACRR-GGVTLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADLVLQISKESPQEIAR  233 (356)
T ss_dssp             HHHHHHHHHHH-HTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSEEEECSSCCHHHHHH
T ss_pred             hHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEEcCcccccchHHH
Confidence            78899999954 456999999999999999999999999999 999999999999888 699999999987   243332


Q ss_pred             H---hc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHhHHHHHHHHHhC
Q 019199          240 A---LG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKDTQEMLEYCAAH  305 (344)
Q Consensus       240 ~---~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~~~~~~~~~~~g  305 (344)
                      +   .+ +++|++||++|.+..+..++++++++|+++.+|.. ....++...+.         ....++++++++++++|
T Consensus       234 ~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l~~~g  313 (356)
T 1pl8_A          234 KVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASK  313 (356)
T ss_dssp             HHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSCHHHHHHHHHTT
T ss_pred             HHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHhcceEEEEecccHHHHHHHHHHHHcC
Confidence            2   22 58999999999987799999999999999999875 22333322111         12246799999999999


Q ss_pred             CCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          306 KIY--PQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       306 ~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      +++  +.+ ++|+++++++|++.+.++ ..||+||+++++
T Consensus       314 ~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~  352 (356)
T 1pl8_A          314 SVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS  352 (356)
T ss_dssp             SCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred             CCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence            975  455 899999999999999988 789999999754

>2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus}

Probab=100.00  E-value=4.8e-53  Score=388.34  Aligned_cols=310  Identities=23%  Similarity=0.332  Sum_probs=267.2

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCcccccceEEEEecCCCCCCCCCCEEEEecccc
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVN   98 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~   98 (344)
                      +.+++++++.|+|++|||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|+++|+++++|++||+|++.+ ..
T Consensus        13 ~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vGdrV~~~~-~~   91 (343)
T 2eih_A           13 EVLEVADLPVPEPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSGVVDAVGPGVEGFAPGDEVVINP-GL   91 (343)
T ss_dssp             GGEEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEEEEEEECSSCCSCCTTCEEEECC-EE
T ss_pred             ceEEEEecCCCCCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEEEEEEECCCCCCCCCCCEEEECC-CC
Confidence            34788999999999999999999999999999999886642 36789999999999999999999999999999877 45


Q ss_pred             CCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCC
Q 019199           99 SCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMN  178 (344)
Q Consensus        99 ~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~  178 (344)
                      .|+.|.+|++|.++.|++....       |....|+|+||+.+|++.++++|+++++++||++++++.|||+++.+...+
T Consensus        92 ~cg~c~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~ta~~al~~~~~~  164 (343)
T 2eih_A           92 SCGRCERCLAGEDNLCPRYQIL-------GEHRHGTYAEYVVLPEANLAPKPKNLSFEEAAAIPLTFLTAWQMVVDKLGV  164 (343)
T ss_dssp             CCSCSHHHHTTCGGGCTTCEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHHHSHHHHHHHHHHHTTTSCC
T ss_pred             CcccchhhccCccccccccccc-------CcCCCccceeEEEeChHHeEECCCCCCHHHHhhchhhHHHHHHHHHHhcCC
Confidence            8999999999999999976421       223469999999999999999999999999999999999999999886677


Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc--CCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG--KSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~--~~~dvvid~~  252 (344)
                      ++|++|||+|+ |++|++++++++..|++|+++++++++++.+ +++|++.+++..+.+.   +.+..  +++|++||++
T Consensus       165 ~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~ga~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~  243 (343)
T 2eih_A          165 RPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRA-KALGADETVNYTHPDWPKEVRRLTGGKGADKVVDHT  243 (343)
T ss_dssp             CTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTSTTHHHHHHHHTTTTCEEEEEESS
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEcCCcccHHHHHHHHhCCCCceEEEECC
Confidence            99999999998 9999999999999999999999999999888 6789999998876433   33333  4799999999


Q ss_pred             CCchhHHHHHHhcccCCEEEEEcCC-Cc-cccCCceee----------eechHhHHHHHHHHHhCCCccce-EEEeCccH
Q 019199          253 SGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLN----------IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENV  319 (344)
Q Consensus       253 g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~  319 (344)
                      | ...+..++++++++|+++.+|.. .. ..++...+.          ....++++++++++++|++++.+ ++|+++++
T Consensus       244 g-~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~  322 (343)
T 2eih_A          244 G-ALYFEGVIKATANGGRIAIAGASSGYEGTLPFAHVFYRQLSILGSTMASKSRLFPILRFVEEGKLKPVVGQVLPLEAA  322 (343)
T ss_dssp             C-SSSHHHHHHHEEEEEEEEESSCCCSCCCCCCTTHHHHTTCEEEECCSCCGGGHHHHHHHHHHTSSCCCEEEEEEGGGH
T ss_pred             C-HHHHHHHHHhhccCCEEEEEecCCCCcCccCHHHHHhCCcEEEEecCccHHHHHHHHHHHHcCCCCCceeEEeeHHHH
Confidence            9 45599999999999999999876 22 123322211          22457899999999999999877 89999999


Q ss_pred             HHHHHHHHcCCcceEEEEEe
Q 019199          320 NEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       320 ~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++||+.+.+++..||+|+++
T Consensus       323 ~~A~~~~~~~~~~gKvvv~~  342 (343)
T 2eih_A          323 AEGHRLLEERRVFGKVVLQV  342 (343)
T ss_dssp             HHHHHHHHTTCSSSEEEEEC
T ss_pred             HHHHHHHHcCCCceEEEEec
Confidence            99999999988889999975

>2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A*

Probab=100.00  E-value=4e-53  Score=389.65  Aligned_cols=318  Identities=21%  Similarity=0.277  Sum_probs=253.4

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcC-CCC--CCCCCCCcccccceEEEEecCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRN-KHG--DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ++++...++...+++++++.|+|+++||+|||.++|||++|++.+.| .++  ...+|.++|||++|+|+++|+++++|+
T Consensus         5 mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~   84 (348)
T 2d8a_A            5 MVAIMKTKPGYGAELVEVDVPKPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAGEVVEIGPGVEGIE   84 (348)
T ss_dssp             EEEEEECSSSSSCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEEEEEEECTTCCSCC
T ss_pred             ceEEEEECCCCCEEEEECCCCCCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceEEEEEECCCCCcCC
Confidence            44555543333788999999999999999999999999999999888 332  246789999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|++.+.. .|++|.+|++|+++.|++....       |....|+|+||+++|++.++++|+++++++||.+. ++.
T Consensus        85 vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~-~~~  155 (348)
T 2d8a_A           85 VGDYVSVETHI-VCGKCYACRRGQYHVCQNTKIF-------GVDTDGVFAEYAVVPAQNIWKNPKSIPPEYATLQE-PLG  155 (348)
T ss_dssp             TTCEEEECCEE-CCSCCC------------CEET-------TTSSCCSSBSEEEEEGGGEEECCTTSCHHHHTTHH-HHH
T ss_pred             CCCEEEEcCCC-CCCCChhhhCcCcccCCCCCee-------cCCCCCcCcceEEeChHHeEECCCCCCHHHHHhhh-HHH
Confidence            99999887754 7999999999999999976421       22356999999999999999999999999998775 788


Q ss_pred             HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG  242 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~  242 (344)
                      |||+++. ...+ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++++.+.   +.+.+
T Consensus       156 ta~~~l~-~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~v~~~~  232 (348)
T 2d8a_A          156 NAVDTVL-AGPI-SGKSVLITGAGPLGLLGIAVAKASGAYPVIVSEPSDFRRELA-KKVGADYVINPFEEDVVKEVMDIT  232 (348)
T ss_dssp             HHHHHHT-TSCC-TTCCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHHHH-HHHTCSEEECTTTSCHHHHHHHHT
T ss_pred             HHHHHHH-hcCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHhCCCEEECCCCcCHHHHHHHHc
Confidence            9999994 5566 99999999999999999999999999 999999999998888 6899999998866433   33333


Q ss_pred             --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-ceee----------eec-hHhHHHHHHHHHhCCC
Q 019199          243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-ASLN----------IGG-TKDTQEMLEYCAAHKI  307 (344)
Q Consensus       243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-~~~~----------~~~-~~~~~~~~~~~~~g~~  307 (344)
                        .++|++||++|....+..++++++++|+++.+|.. ....++. ..+.          ... .++++++++++++|++
T Consensus       233 ~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~i  312 (348)
T 2d8a_A          233 DGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGKVTIDFNNLIIFKALTIYGITGRHLWETWYTVSRLLQSGKL  312 (348)
T ss_dssp             TTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCCCCCHHHHTTTTTCEEEECCCCCSHHHHHHHHHHHHHTCC
T ss_pred             CCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCCcccCchHHHHhCCcEEEEecCCCcHHHHHHHHHHHHcCCC
Confidence              47999999999877799999999999999999876 3333332 1111          123 5789999999999996


Q ss_pred             --ccce-EEEe-CccHHHHHHHHHcCCcceEEEEEeC
Q 019199          308 --YPQI-ETIP-IENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       308 --~~~~-~~~~-~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                        ++.+ ++|+ ++++++|++.+.+ +..||+||+++
T Consensus       313 ~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~  348 (348)
T 2d8a_A          313 NLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK  348 (348)
T ss_dssp             CCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred             ChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence              4555 7999 9999999999977 56799999863

>1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.4e-53  Score=389.38  Aligned_cols=325  Identities=24%  Similarity=0.322  Sum_probs=265.1

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcC-CCC--CCCCCCCcccccceEEEEecC
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRN-KHG--DSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g-~~~--~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      |+.+||+..+.  + ++.+++++.+.|+|+++||+|||.++|||++|++.+.+ ..+  ...+|.++|||++|+|+++|+
T Consensus         1 m~~~mka~~~~--~-~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~vG~   77 (352)
T 1e3j_A            1 MASDNLSAVLY--K-QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGK   77 (352)
T ss_dssp             ---CCEEEEEE--E-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECT
T ss_pred             CcccCEEEEEE--c-CCcEEEEEecCCCCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceEEEEEeCC
Confidence            33345544443  2 46788999999999999999999999999999988773 322  235789999999999999999


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP  160 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~  160 (344)
                      ++++|++||+|++.+.. .|+.|.+|++|.++.|++..+.  +.    ....|+|+||+.++++.++++|+++++++||.
T Consensus        78 ~v~~~~vGdrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~--g~----~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~  150 (352)
T 1e3j_A           78 NVKHLKKGDRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFC--AT----PPDDGNLARYYVHAADFCHKLPDNVSLEEGAL  150 (352)
T ss_dssp             TCCSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCTTCEET--TB----TTBCCSCBSEEEEEGGGEEECCTTSCHHHHHT
T ss_pred             CCCCCCCCCEEEEcCcC-CCCCChhhhCcCcccCCCCccc--Cc----CCCCccceeEEEeChHHeEECcCCCCHHHHHh
Confidence            99999999999887654 7999999999999999976321  11    12469999999999999999999999999985


Q ss_pred             cchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-H---H
Q 019199          161 LLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-L---E  236 (344)
Q Consensus       161 l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~---~  236 (344)
                      + .++.|||+++.. ..+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++ .   +
T Consensus       151 ~-~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~~~~~~~~~~~  227 (352)
T 1e3j_A          151 L-EPLSVGVHACRR-AGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGADVTLVVDPAKEEES  227 (352)
T ss_dssp             H-HHHHHHHHHHHH-HTCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEEEECCTTTSCHH
T ss_pred             h-chHHHHHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEcCCHHHHHHH-HHhCCCEEEcCcccccHHH
Confidence            5 578899999954 456999999999999999999999999999999999999999888 6999999998764 3   2


Q ss_pred             HHHHh-----cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHhHHHHHHH
Q 019199          237 QMKAL-----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKDTQEMLEY  301 (344)
Q Consensus       237 ~~~~~-----~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~~~~~~~~  301 (344)
                      .+.+.     .+++|++||++|...+++.++++++++|+++.+|.. ....++...+.         ....+++++++++
T Consensus       228 ~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~l  307 (352)
T 1e3j_A          228 SIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEM  307 (352)
T ss_dssp             HHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSSCHHHHHHH
T ss_pred             HHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCccccHHHHHhcCcEEEEeccchHHHHHHHHH
Confidence            33332     257999999999987799999999999999999875 22223221111         2224679999999


Q ss_pred             HHhCCCc--cce-EEEeCccHHHHHHHHHcCC-cceEEEEEeCC
Q 019199          302 CAAHKIY--PQI-ETIPIENVNEALERLIKRD-VKYRFVIDIQN  341 (344)
Q Consensus       302 ~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~~-~~gkvvi~~~~  341 (344)
                      +++|+++  +.+ ++|+++++++|++.+.+++ ..+|+||++++
T Consensus       308 ~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  351 (352)
T 1e3j_A          308 VASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ  351 (352)
T ss_dssp             HHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred             HHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence            9999974  455 8999999999999999988 68999998863

>3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa}

Probab=100.00  E-value=1.9e-53  Score=394.12  Aligned_cols=325  Identities=19%  Similarity=0.243  Sum_probs=265.6

Q ss_pred             cccccceeeeeecCCCCCccceeeccC--------CCCCCcEEEEEeeeecccchhhhhcCCC-C--CCCCCCCcccccc
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRR--------AVGSDDVSITITHCGVCYADVIWTRNKH-G--DSKYPLVPGHEIV   72 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p--------~~~~~evlV~v~~~~i~~~D~~~~~g~~-~--~~~~p~~~G~e~~   72 (344)
                      |+.+++++++.+. +++.+++++++.|        +|++|||||||.++|||++|++.+.+.. +  ...+|.++|||++
T Consensus         3 ~~~~~~mka~~~~-~~~~l~~~~~~~P~~~~~~~~~~~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~p~v~G~E~~   81 (363)
T 3m6i_A            3 SSASKTNIGVFTN-PQHDLWISEASPSLESVQKGEELKEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVECDHVLGHESA   81 (363)
T ss_dssp             --CCSCCEEEEEC-TTCCEEEEECSSCHHHHHHTCSCCTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCSCEECCCEEE
T ss_pred             CCCcccceeEEEe-CCCcEEEEEecCCccccccCCCcCCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCCCcccCcceE
Confidence            4555666777764 5678999999999        9999999999999999999999886432 1  2467899999999


Q ss_pred             eEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCC
Q 019199           73 GIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAND  152 (344)
Q Consensus        73 G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~  152 (344)
                      |+|+++|+++++|++||+|++.+.. .|++|.+|++|.++.|.+..+...      ....|+|+||+++|++.++++|+ 
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~~~-~cg~C~~c~~g~~~~c~~~~~~g~------~~~~G~~aey~~v~~~~~~~iP~-  153 (363)
T 3m6i_A           82 GEVIAVHPSVKSIKVGDRVAIEPQV-ICNACEPCLTGRYNGCERVDFLST------PPVPGLLRRYVNHPAVWCHKIGN-  153 (363)
T ss_dssp             EEEEEECTTCCSCCTTCEEEECCEE-CCSCSHHHHTTCGGGCTTCEETTS------TTSCCSCBSEEEEEGGGEEECTT-
T ss_pred             EEEEEECCCCCCCCCCCEEEEeccc-CCCCCHHHHCcCcccCCCccccCC------CCCCccceeEEEEehhhEEECCC-
Confidence            9999999999999999999887754 899999999999999998643211      12569999999999999999999 


Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +++++||.+ .++.|||+++.. ..+++|++|||+|+|++|++++|+||.+|++ |++++.++++++.+ +++ ++.+++
T Consensus       154 ~s~~~aa~~-~~~~ta~~~l~~-~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~l-~~~~~~  229 (363)
T 3m6i_A          154 MSYENGAML-EPLSVALAGLQR-AGVRLGDPVLICGAGPIGLITMLCAKAAGACPLVITDIDEGRLKFA-KEI-CPEVVT  229 (363)
T ss_dssp             CCHHHHHHH-HHHHHHHHHHHH-HTCCTTCCEEEECCSHHHHHHHHHHHHTTCCSEEEEESCHHHHHHH-HHH-CTTCEE
T ss_pred             CCHHHHHhh-hHHHHHHHHHHH-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-chhccc
Confidence            999999977 478899999954 4569999999999999999999999999996 99999999999988 566 544444


Q ss_pred             CC----C-HHH---HHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eec
Q 019199          232 SS----D-LEQ---MKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGG  291 (344)
Q Consensus       232 ~~----~-~~~---~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~  291 (344)
                      +.    + .+.   +.+.+  +++|++||++|++.++..++++++++|+++.+|.. ....++...+.         ...
T Consensus       230 ~~~~~~~~~~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~  309 (363)
T 3m6i_A          230 HKVERLSAEESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNEIQIPFMRASVREVDLQFQYRY  309 (363)
T ss_dssp             EECCSCCHHHHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSCCCCCHHHHHHHTCEEEECCSC
T ss_pred             ccccccchHHHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCCccccHHHHHhcCcEEEEccCC
Confidence            32    2 232   23333  58999999999987799999999999999999976 33333322221         222


Q ss_pred             hHhHHHHHHHHHhCCCc--cce-EEEeCccHHHHHHHHHcC-CcceEEEEEeCC
Q 019199          292 TKDTQEMLEYCAAHKIY--PQI-ETIPIENVNEALERLIKR-DVKYRFVIDIQN  341 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~~~--~~~-~~~~~~~~~~a~~~~~~~-~~~gkvvi~~~~  341 (344)
                      .++++++++++++|+++  +.+ ++|+++++++||+.+.++ ...+|+||++++
T Consensus       310 ~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~  363 (363)
T 3m6i_A          310 CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE  363 (363)
T ss_dssp             SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred             HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence            57899999999999994  455 899999999999999998 567899999864

>4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli}

Probab=100.00  E-value=2.7e-52  Score=383.94  Aligned_cols=315  Identities=21%  Similarity=0.339  Sum_probs=263.2

Q ss_pred             eeeeecCCCCCccceeeccCC-CCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRA-VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      ++++.. .++.+++++.|+|+ +++|||||||.|+|||++|++.+.|..+ ..+|.++|||++|+|+++|++++++++||
T Consensus         2 kAvv~~-~~g~l~v~e~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G~V~~vG~~V~~~~~Gd   79 (346)
T 4a2c_A            2 KSVVND-TDGIVRVAESVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSGYIDAVGSGVDDLHPGD   79 (346)
T ss_dssp             EEEEEC-SSSCEEEEECCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEEEEEEECTTCCSCCTTC
T ss_pred             CEEEEe-cCCCEEEEEEeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEEEEEEECCCcccccCCC
Confidence            445543 56789999999999 5799999999999999999998888654 56899999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|++.+.. .|++|.+|..|.++.|.+....       |...+|+|+||+++|++.++++|+++++++||.+. ..++++
T Consensus        80 rV~~~~~~-~~g~c~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~-~~~~~~  150 (346)
T 4a2c_A           80 AVACVPLL-PCFTCPECLKGFYSQCAKYDFI-------GSRRDGGFAEYIVVKRKNVFALPTDMPIEDGAFIE-PITVGL  150 (346)
T ss_dssp             EEEECCEE-CCSCSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEEEGGGEEECCTTSCGGGGGGHH-HHHHHH
T ss_pred             eEEeeecc-CCCCcccccCCccccCCCcccc-------cCCCCcccccccccchheEEECCCCCCHHHHHhch-HHHHHH
Confidence            99887654 7999999999999999986433       33567999999999999999999999999999765 445556


Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHH---HHHHh--cC
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKAL--GK  243 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~~--~~  243 (344)
                      +++... .+++|++|||+|+|++|++++|+|+++|++ +++++.+++|++.+ +++|+++++|+++.+   ...++  .+
T Consensus       151 ~~~~~~-~~~~g~~VlV~GaG~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-~~lGa~~~i~~~~~~~~~~~~~~~~~~  228 (346)
T 4a2c_A          151 HAFHLA-QGCENKNVIIIGAGTIGLLAIQCAVALGAKSVTAIDISSEKLALA-KSFGAMQTFNSSEMSAPQMQSVLRELR  228 (346)
T ss_dssp             HHHHHT-TCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSEEEETTTSCHHHHHHHHGGGC
T ss_pred             HHHHHh-ccCCCCEEEEECCCCcchHHHHHHHHcCCcEEEEEechHHHHHHH-HHcCCeEEEeCCCCCHHHHHHhhcccC
Confidence            555544 459999999999999999999999999995 57778888888888 799999999987643   23333  36


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------e---------echHhHHHHHHHHHh
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------I---------GGTKDTQEMLEYCAA  304 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~---------~~~~~~~~~~~~~~~  304 (344)
                      ++|+++|++|.+.+++.++++++++|+++.+|.. .+..+....+.         .         ...++++++++++.+
T Consensus       229 g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~~~~~~~l~~~  308 (346)
T 4a2c_A          229 FNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDLHLTSATFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTE  308 (346)
T ss_dssp             SSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCEEECHHHHHHHHHHTCEEEECCTTCCSSTTCHHHHHHHHHHHT
T ss_pred             CcccccccccccchhhhhhheecCCeEEEEEeccCCCccccccCHHHHhhceeEEEEEeccccCcchHHHHHHHHHHHHc
Confidence            8999999999988899999999999999999976 33322221110         1         113679999999999


Q ss_pred             CCCc--cce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          305 HKIY--PQI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       305 g~~~--~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      |+++  +.+ ++|+|+++++|++.+.+++..||+||.
T Consensus       309 g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~  345 (346)
T 4a2c_A          309 RKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLI  345 (346)
T ss_dssp             TCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEEC
T ss_pred             CCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEE
Confidence            9985  445 899999999999999999999999984

>2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A*

Probab=100.00  E-value=6.6e-53  Score=387.44  Aligned_cols=316  Identities=21%  Similarity=0.336  Sum_probs=265.1

Q ss_pred             eeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCC
Q 019199           12 GWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVG   88 (344)
Q Consensus        12 ~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~G   88 (344)
                      ++...+....+++++++.|+|++|||+|||.++|||++|++.+.|..+   ...+|.++|||++|+|+++|+++++|++|
T Consensus         3 a~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~vG   82 (343)
T 2dq4_A            3 ALAKLAPEEGLTLVDRPVPEPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSGVVEAVGPGVRRPQVG   82 (343)
T ss_dssp             EEEECSSSSSCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEEEEEEECTTCCSSCTT
T ss_pred             EEEEeCCCCcEEEEeccCCCCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceEEEEEECCCCCcCCCC
Confidence            444443333388999999999999999999999999999999988654   34678999999999999999999999999


Q ss_pred             CEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHh
Q 019199           89 DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        89 d~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |+|+..+.. .|++|.+|++|+++.|++....       |....|+|+||+.++++.++++|+++++++||.+ .++.||
T Consensus        83 drV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~-~~~~ta  153 (343)
T 2dq4_A           83 DHVSLESHI-VCHACPACRTGNYHVCLNTQIL-------GVDRDGGFAEYVVVPAENAWVNPKDLPFEVAAIL-EPFGNA  153 (343)
T ss_dssp             CEEEECCEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEEECTTSCHHHHTTH-HHHHHH
T ss_pred             CEEEECCCC-CCCCChhhhCcCcccCCCccee-------cCCCCCcceeEEEEchHHeEECCCCCCHHHHHhh-hHHHHH
Confidence            999887655 7999999999999999986421       2235699999999999999999999999999876 467899


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh-cC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL-GK  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~-~~  243 (344)
                      |+++.....+ +|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++ +++++++.+.+.   +.+. .+
T Consensus       154 ~~~l~~~~~~-~g~~VlV~GaG~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~-~~l-a~~v~~~~~~~~~~~~~~~~~~  230 (343)
T 2dq4_A          154 VHTVYAGSGV-SGKSVLITGAGPIGLMAAMVVRASGAGPILVSDPNPYRLAFA-RPY-ADRLVNPLEEDLLEVVRRVTGS  230 (343)
T ss_dssp             HHHHHSTTCC-TTSCEEEECCSHHHHHHHHHHHHTTCCSEEEECSCHHHHGGG-TTT-CSEEECTTTSCHHHHHHHHHSS
T ss_pred             HHHHHHhCCC-CCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHh-HHhccCcCccCHHHHHHHhcCC
Confidence            9999746666 99999999999999999999999999 999999999998888 678 999998875433   2332 45


Q ss_pred             CccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-ceee----------ee-chHhHHHHHHHHHhCCC--c
Q 019199          244 SLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-ASLN----------IG-GTKDTQEMLEYCAAHKI--Y  308 (344)
Q Consensus       244 ~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-~~~~----------~~-~~~~~~~~~~~~~~g~~--~  308 (344)
                      ++|++||++|+...++.++++++++|+++.+|.. ....++. ..+.          .. ..++++++++++++|++  +
T Consensus       231 g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g~~~~~  310 (343)
T 2dq4_A          231 GVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSDPIRFDLAGELVMRGITAFGIAGRRLWQTWMQGTALVYSGRVDLS  310 (343)
T ss_dssp             CEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSCEEECHHHHTGGGTCEEEECCSCCTTHHHHHHHHHHHHTSSCCG
T ss_pred             CCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCceeCcHHHHHhCceEEEEeecCCCHHHHHHHHHHHHcCCCChH
Confidence            7999999999966799999999999999999876 3333333 2111          11 45789999999999995  5


Q ss_pred             cce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          309 PQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       309 ~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      +.+ ++|+++++++|++.+.+++. ||+|++++
T Consensus       311 ~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~  342 (343)
T 2dq4_A          311 PLLTHRLPLSRYREAFGLLASGQA-VKVILDPK  342 (343)
T ss_dssp             GGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred             HheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence            665 89999999999999998887 99999875

>3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021}

Probab=100.00  E-value=2.7e-52  Score=386.03  Aligned_cols=320  Identities=23%  Similarity=0.320  Sum_probs=266.8

Q ss_pred             ccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCC
Q 019199            5 TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      +.+|++..+..+ +++.+++++.+.|+|++|||||||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++++
T Consensus        25 ~~~mkA~~~~~~-~~~~l~~~e~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G~V~~vG~~v~  103 (363)
T 3uog_A           25 SKWMQEWSTETV-APHDLKLAERPVPEAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSGVVEAVGKSVT  103 (363)
T ss_dssp             CSEEEEEEBSCT-TTTCCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEEEEEEECTTCC
T ss_pred             chhhEEEEEccC-CCCCcEEEeeeCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEEEEEEECCCCC
Confidence            344555444433 457899999999999999999999999999999999988765 457899999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccch
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLC  163 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~  163 (344)
                      +|++||+|+..+.       .+|..|. +.|.+.....   ...|...+|+|+||+.+|++.++++|+++++++||++++
T Consensus       104 ~~~vGDrV~~~~~-------~~c~~g~-~~c~~~~~~~---~~~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~  172 (363)
T 3uog_A          104 RFRPGDRVISTFA-------PGWLDGL-RPGTGRTPAY---ETLGGAHPGVLSEYVVLPEGWFVAAPKSLDAAEASTLPC  172 (363)
T ss_dssp             SCCTTCEEEECSS-------TTCCSSS-CCSCSSCCCC---CCTTTTSCCCCBSEEEEEGGGEEECCTTSCHHHHHTTTT
T ss_pred             CCCCCCEEEEecc-------ccccccc-cccccccccc---cccCcCCCCcceeEEEechHHeEECCCCCCHHHHhhccc
Confidence            9999999987543       2678888 8887421110   001234579999999999999999999999999999999


Q ss_pred             hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH---HHHH
Q 019199          164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE---QMKA  240 (344)
Q Consensus       164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~---~~~~  240 (344)
                      ++.|||+++.+...+++|++|||+|+|++|++++|+|+.+|++|+++++++++++.+ +++|++++++....+   .+.+
T Consensus       173 ~~~ta~~al~~~~~~~~g~~VlV~G~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~v~~  251 (363)
T 3uog_A          173 AGLTAWFALVEKGHLRAGDRVVVQGTGGVALFGLQIAKATGAEVIVTSSSREKLDRA-FALGADHGINRLEEDWVERVYA  251 (363)
T ss_dssp             HHHHHHHHHTTTTCCCTTCEEEEESSBHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHHHHHH
T ss_pred             HHHHHHHHHHHhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEecCchhHHHH-HHcCCCEEEcCCcccHHHHHHH
Confidence            999999999777777999999999999999999999999999999999999999888 789999999954333   2333


Q ss_pred             hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee----------eechHhHHHHHHHHHhCC
Q 019199          241 LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN----------IGGTKDTQEMLEYCAAHK  306 (344)
Q Consensus       241 ~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~----------~~~~~~~~~~~~~~~~g~  306 (344)
                      .+  +++|++||++|.. .+..++++++++|+++.+|...  ...++...+.          ...+++++++++++++|+
T Consensus       252 ~~~g~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~  330 (363)
T 3uog_A          252 LTGDRGADHILEIAGGA-GLGQSLKAVAPDGRISVIGVLEGFEVSGPVGPLLLKSPVVQGISVGHRRALEDLVGAVDRLG  330 (363)
T ss_dssp             HHTTCCEEEEEEETTSS-CHHHHHHHEEEEEEEEEECCCSSCEECCBTTHHHHTCCEEEECCCCCHHHHHHHHHHHHHHT
T ss_pred             HhCCCCceEEEECCChH-HHHHHHHHhhcCCEEEEEecCCCcccCcCHHHHHhCCcEEEEEecCCHHHHHHHHHHHHcCC
Confidence            33  4899999999965 4999999999999999999762  2333333221          334688999999999999


Q ss_pred             Cccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          307 IYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       307 ~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +++.+ ++|+++++++||+.+.+++ .||+||++
T Consensus       331 l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~  363 (363)
T 3uog_A          331 LKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF  363 (363)
T ss_dssp             CCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred             CccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence            99877 8999999999999999999 99999975

>1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=1.9e-52  Score=389.35  Aligned_cols=324  Identities=23%  Similarity=0.355  Sum_probs=268.6

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC------
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS------   83 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~------   83 (344)
                      ++++++.++.+.+++++++.|+|+++||||||.++|||++|++.+.|..+...+|.++|||++|+|+++| +++      
T Consensus        18 mka~~~~~~g~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G~V~~vG-~V~~~~~~~   96 (380)
T 1vj0_A           18 AHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVN-GEKRDLNGE   96 (380)
T ss_dssp             EEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEES-SCCBCTTSC
T ss_pred             eEEEEEecCCCCeEEEEccCCCCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEEEEEEeC-CccccccCC
Confidence            3455554333488999999999999999999999999999999998866545689999999999999999 999      


Q ss_pred             CCCCCCEEEEeccccCCCCCcccc-CCCCCCCCcccccccccc---CCCCccCCcceeEEEE-ecceEEEcCCCCCcc-c
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCN-DGLEVHCARSVYTFNAID---ADGTITKGGYSSYIVV-HERYCYKIANDYPLA-L  157 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~-~~~~~~c~~~~~~~~~~~---~~~~~~~g~~~~~~~~-~~~~~~~~P~~~~~~-~  157 (344)
                      +|++||+|++.+.. .|++|.+|+ +|.++.|++....  +..   .......|+|+||+++ |++.++++|++++++ +
T Consensus        97 ~~~vGdrV~~~~~~-~cg~C~~C~~~g~~~~C~~~~~~--g~~~~~~~~~~~~G~~aey~~v~~~~~~~~iP~~l~~~~~  173 (380)
T 1vj0_A           97 LLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVY--GINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKDDLDVL  173 (380)
T ss_dssp             BCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEET--TTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTSCHHHH
T ss_pred             CCCCCCEEEEcccC-CCCCCHHHhcCCCcccCCCccee--ccccccCCCCCCCccccceEEEcccceEEECCCCCChHHh
Confidence            99999999887765 799999999 9999999876321  110   0001236999999999 999999999999999 6


Q ss_pred             ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC---
Q 019199          158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS---  233 (344)
Q Consensus       158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~---  233 (344)
                      |+.+. ++.|||+++.....+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++.   
T Consensus       174 Aa~~~-~~~ta~~al~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~  251 (380)
T 1vj0_A          174 AMAMC-SGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADLTLNRRETS  251 (380)
T ss_dssp             HHHTT-HHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSEEEETTTSC
T ss_pred             Hhhhc-HHHHHHHHHHhcCCCCCCCEEEEECcCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHH-HHcCCcEEEeccccC
Confidence            65554 999999999655316999999999999999999999999995 999999999999888 689999999987   


Q ss_pred             CHHH---HHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCCce-ee----------eechHh
Q 019199          234 DLEQ---MKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSPAS-LN----------IGGTKD  294 (344)
Q Consensus       234 ~~~~---~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~~~-~~----------~~~~~~  294 (344)
                      +.+.   +.+.+  .++|++||++|.+..+..++++++++|+++.+|...   ...++... +.          ....++
T Consensus       252 ~~~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~  331 (380)
T 1vj0_A          252 VEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSH  331 (380)
T ss_dssp             HHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCCHHH
T ss_pred             cchHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCCCeeEchHHHHHhCCeEEEEeecCCHHH
Confidence            4443   33333  379999999998767999999999999999998753   33344322 11          224578


Q ss_pred             HHHHHHHHHh--CCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          295 TQEMLEYCAA--HKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       295 ~~~~~~~~~~--g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      ++++++++++  |++++.+ ++|+++++++|++.+.+++.. |+||+++
T Consensus       332 ~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~  379 (380)
T 1vj0_A          332 FVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE  379 (380)
T ss_dssp             HHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred             HHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence            9999999999  9998776 899999999999999998888 9999875

>3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A

Probab=100.00  E-value=1.7e-52  Score=385.99  Aligned_cols=321  Identities=18%  Similarity=0.254  Sum_probs=267.3

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhh-hhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVI-WTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~-~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      +++++. .++.+++++++.|+|++|||+|||.++|||++|++ ++.|..+ ..+|.++|||++|+|+++|+++++|++||
T Consensus         2 kA~~~~-~~~~~~~~e~~~P~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G~V~~vG~~v~~~~vGd   79 (352)
T 3fpc_A            2 KGFAML-SIGKVGWIEKEKPAPGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVGEVVEVGSEVKDFKPGD   79 (352)
T ss_dssp             EEEEEE-ETTEEEEEECCCCCCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEEEEEEECTTCCSCCTTC
T ss_pred             eEEEEc-cCCCceEEeCCCCCCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceEEEEEECCCCCcCCCCC
Confidence            344443 34568889999999999999999999999999998 5577665 46799999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcccccccchhhhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      +|++.+.. .|+.|.+|+.|+++.|......+.    .+....|+|+||+.+++.  .++++|+++++++||.+++++.|
T Consensus        80 rV~~~~~~-~c~~c~~c~~g~~~~~~~~~~~~~----~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~~aa~~~~~~~t  154 (352)
T 3fpc_A           80 RVVVPAIT-PDWRTSEVQRGYHQHSGGMLAGWK----FSNVKDGVFGEFFHVNDADMNLAHLPKEIPLEAAVMIPDMMTT  154 (352)
T ss_dssp             EEEECSBC-CCSSSHHHHTTCGGGTTSTTTTBC----BTTTBCCSSBSCEEESSHHHHCEECCTTSCHHHHTTTTTHHHH
T ss_pred             EEEEcccc-CCCCchhhcCCCcCCccccccccc----cccCCCCcccceEEeccccCeEEECCCCCCHHHHhhccchhHH
Confidence            99887654 799999999999998876432111    122457999999999976  89999999999999999999999


Q ss_pred             hHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHhc-
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKALG-  242 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~~-  242 (344)
                      ||+++.. ..+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++++.+.   +.+.+ 
T Consensus       155 a~~al~~-~~~~~g~~VlV~GaG~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~v~~~t~  232 (352)
T 3fpc_A          155 GFHGAEL-ANIKLGDTVCVIGIGPVGLMSVAGANHLGAGRIFAVGSRKHCCDIA-LEYGATDIINYKNGDIVEQILKATD  232 (352)
T ss_dssp             HHHHHHH-TTCCTTCCEEEECCSHHHHHHHHHHHTTTCSSEEEECCCHHHHHHH-HHHTCCEEECGGGSCHHHHHHHHTT
T ss_pred             HHHHHHh-cCCCCCCEEEEECCCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHH-HHhCCceEEcCCCcCHHHHHHHHcC
Confidence            9999954 455999999999999999999999999999 899999999998888 7899999999866543   33343 


Q ss_pred             -CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C--ccccCCcee-------e------eechHhHHHHHHHHHhC
Q 019199          243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S--KVKFSPASL-------N------IGGTKDTQEMLEYCAAH  305 (344)
Q Consensus       243 -~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~--~~~~~~~~~-------~------~~~~~~~~~~~~~~~~g  305 (344)
                       +++|++||++|++.++..++++++++|+++.+|.. .  ..+++....       .      ...+++++++++++++|
T Consensus       233 g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~l~~~g  312 (352)
T 3fpc_A          233 GKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDNIDIPRSEWGVGMGHKHIHGGLCPGGRLRMERLIDLVFYK  312 (352)
T ss_dssp             TCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSEEEEETTTTGGGTBCEEEEEBCCCCHHHHHHHHHHHHHTT
T ss_pred             CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCceecchhHhhhhccccEEEEeeccCchhHHHHHHHHHHcC
Confidence             47999999999977799999999999999999976 2  222222211       1      12356899999999999


Q ss_pred             CCccc--e-EEEe-CccHHHHHHHHHcCCcc-eEEEEEeC
Q 019199          306 KIYPQ--I-ETIP-IENVNEALERLIKRDVK-YRFVIDIQ  340 (344)
Q Consensus       306 ~~~~~--~-~~~~-~~~~~~a~~~~~~~~~~-gkvvi~~~  340 (344)
                      ++++.  + ++|+ ++++++||+.+.+++.. +|+||++.
T Consensus       313 ~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~  352 (352)
T 3fpc_A          313 RVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA  352 (352)
T ss_dssp             SCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred             CCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence            99863  4 8999 99999999999987654 89999874

>1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A*

Probab=100.00  E-value=3.4e-52  Score=383.29  Aligned_cols=318  Identities=30%  Similarity=0.493  Sum_probs=269.8

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC--------CCCCCCCcccccceEEEEecCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--------DSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      +++.+.+..+++++++++.|+|+++||+|||.++|+|++|++.+.|..+        ...+|.++|||++|+|+++|+++
T Consensus         2 ka~~~~~~g~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~G~V~~vG~~v   81 (347)
T 1jvb_A            2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEV   81 (347)
T ss_dssp             EEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTC
T ss_pred             eEEEEecCCCCeEEEEeeCCCCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccceEEEEEECCCC
Confidence            3455544445688999999999999999999999999999999887654        24679999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec-ceEEEcCCCCCccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE-RYCYKIANDYPLALAAPL  161 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~-~~~~~~P~~~~~~~aa~l  161 (344)
                      ++|++||+|+.++. ..|++|.+|++|.++.|++....       |....|+|+||+.+|+ +.++++ +++++++||++
T Consensus        82 ~~~~vGdrV~~~~~-~~Cg~C~~C~~g~~~~C~~~~~~-------G~~~~G~~aey~~v~~~~~~~~i-~~~~~~~aa~l  152 (347)
T 1jvb_A           82 VGYSKGDLVAVNPW-QGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKL-RRLNAVEAAPL  152 (347)
T ss_dssp             CSCCTTCEEEECCE-ECCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEEC-SSSCHHHHGGG
T ss_pred             CCCCCCCEEEeCCC-CCCCCChhhhCcCcccCcccccc-------cccCCCcceeEEEecCccceEEe-CCCCHHHcccc
Confidence            99999999966554 48999999999999999876321       2235699999999999 999999 99999999999


Q ss_pred             chhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH--
Q 019199          162 LCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ--  237 (344)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~--  237 (344)
                      ++++.|||+++.+ ..+++|++|||+|+ |++|++++|+++.. |++|+++++++++++.+ +++|++.+++..+.+.  
T Consensus       153 ~~~~~ta~~~l~~-~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~  230 (347)
T 1jvb_A          153 TCSGITTYRAVRK-ASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADYVINASMQDPLA  230 (347)
T ss_dssp             GTHHHHHHHHHHH-TTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHH
T ss_pred             hhhHHHHHHHHHh-cCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHH-HHhCCCEEecCCCccHHH
Confidence            9999999999976 45699999999998 59999999999999 99999999999998888 6899999998876543  


Q ss_pred             -HHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-ccccCCceee----------eechHhHHHHHHHHH
Q 019199          238 -MKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KVKFSPASLN----------IGGTKDTQEMLEYCA  303 (344)
Q Consensus       238 -~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~~~~~~~~----------~~~~~~~~~~~~~~~  303 (344)
                       +.+..  +++|++||++|....++.++++++++|+++.+|... ...++...+.          ....+++++++++++
T Consensus       231 ~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~  310 (347)
T 1jvb_A          231 EIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAE  310 (347)
T ss_dssp             HHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHHHHHHHHHHH
T ss_pred             HHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCHHHHHhCceEEEEEeccCHHHHHHHHHHHH
Confidence             33443  589999999999866999999999999999998763 2133322211          223578999999999


Q ss_pred             hCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          304 AHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       304 ~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +|++++.+ ++|+++++++|++.+.+++..||+||++
T Consensus       311 ~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  347 (347)
T 1jvb_A          311 AGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP  347 (347)
T ss_dssp             TTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             cCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence            99999877 8999999999999999998889999874

>3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A

Probab=100.00  E-value=7.1e-51  Score=387.28  Aligned_cols=331  Identities=15%  Similarity=0.193  Sum_probs=272.0

Q ss_pred             CccccccceeeeeecCC---------------CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCC---------
Q 019199            2 TSETASKDCLGWAARDP---------------SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNK---------   57 (344)
Q Consensus         2 ~~~~~~~~~~~~~~~~~---------------~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~---------   57 (344)
                      +.|+.+.+++++++.++               ++.+++++++.|+|++|||||||.++|||++|++...+.         
T Consensus        23 ~~~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~~~~l~~~e~p~P~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~~~  102 (456)
T 3krt_A           23 AALPLPESYRAITVHKDETEMFAGLETRDKDPRKSIHLDDVPVPELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGFLE  102 (456)
T ss_dssp             HHSCCCSCEEEEEEEGGGTTTTTTCCGGGCCHHHHCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHHHH
T ss_pred             ccCCCCcceEEEEEeccccccccccccccCCCCCCcEEEEccCCCCCCCeEEEEEEEEEecchhhhhhhcCcccchhhhh
Confidence            44556666667666543               356888999999999999999999999999998654321         


Q ss_pred             ----CC----CCCCC-CCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCC
Q 019199           58 ----HG----DSKYP-LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADG  128 (344)
Q Consensus        58 ----~~----~~~~p-~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~  128 (344)
                          .+    ...+| .++|||++|+|+++|+++++|++||+|++.+.  .|..|..|..+.++.|++....  +.    
T Consensus       103 ~~g~~~~~~~~~~~P~~v~GhE~~G~Vv~vG~~v~~~~vGdrV~~~~~--~c~~~~~~~~~~~~~c~~~~~~--G~----  174 (456)
T 3krt_A          103 RYGRVSDLAKRHDLPYHVIGSDLAGVVLRTGPGVNAWQAGDEVVAHCL--SVELESSDGHNDTMLDPEQRIW--GF----  174 (456)
T ss_dssp             HHHTSCHHHHTTCCSEEECCSCCEEEEEEECTTCCSCCTTCEEEECCE--ECCCCSGGGTTSGGGCTTCEET--TT----
T ss_pred             hccccccccccCCCCcccccceeEEEEEEECCCCCCCCCCCEEEEeCC--cccccccccccccccCcccccc--cc----
Confidence                11    23567 68999999999999999999999999998664  5899999999999999875322  11    


Q ss_pred             CccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhc--cCCCCCCEEEEECC-ChHHHHHHHHHHHCCC
Q 019199          129 TITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL  205 (344)
Q Consensus       129 ~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~  205 (344)
                      ....|+|+||+++++++++++|+++++++||.+++++.|||+++...  ..+++|++|||+|+ |++|++++|+|+.+|+
T Consensus       175 ~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga  254 (456)
T 3krt_A          175 ETNFGGLAEIALVKSNQLMPKPDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGA  254 (456)
T ss_dssp             TSSSCSSBSEEEEEGGGEEECCTTSCHHHHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTC
T ss_pred             CCCCCcccceEEechHHeeECCCCCCHHHHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCC
Confidence            12359999999999999999999999999999999999999998754  56799999999998 9999999999999999


Q ss_pred             eEEEEeCCchhHHHHHHhCCCcEEEeCCCH--------------------HHHHHhc--CCccEEEECCCCchhHHHHHH
Q 019199          206 NVTVLSTSTSKKEEALSLLGADKFVVSSDL--------------------EQMKALG--KSLDFIIDTASGDHPFDAYMS  263 (344)
Q Consensus       206 ~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--------------------~~~~~~~--~~~dvvid~~g~~~~~~~~~~  263 (344)
                      +|+++++++++++.+ +++|++.++++.+.                    +.+.+.+  +++|++||++|+. .+..+++
T Consensus       255 ~vi~~~~~~~~~~~~-~~lGa~~vi~~~~~d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~-~~~~~~~  332 (456)
T 3krt_A          255 NPICVVSSPQKAEIC-RAMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRE-TFGASVF  332 (456)
T ss_dssp             EEEEEESSHHHHHHH-HHHTCCEEEETTTTTCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHH-HHHHHHH
T ss_pred             eEEEEECCHHHHHHH-HhhCCcEEEecCcCcccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCch-hHHHHHH
Confidence            999999999999888 78999999998653                    2333333  5899999999984 5999999


Q ss_pred             hcccCCEEEEEcCCC--ccccCCc-------eee---eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCC
Q 019199          264 LLKVAGVYVLVGFPS--KVKFSPA-------SLN---IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRD  330 (344)
Q Consensus       264 ~l~~~G~iv~~g~~~--~~~~~~~-------~~~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~  330 (344)
                      +++++|+++.+|...  ...++..       .+.   ....+++.++++++++|++++.+ ++|+++++++|++.+.+++
T Consensus       333 ~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA~~~l~~~~  412 (456)
T 3krt_A          333 VTRKGGTITTCASTSGYMHEYDNRYLWMSLKRIIGSHFANYREAWEANRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNL  412 (456)
T ss_dssp             HEEEEEEEEESCCTTCSEEEEEHHHHHHTTCEEEECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTC
T ss_pred             HhhCCcEEEEEecCCCcccccCHHHHHhcCeEEEEeccCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHHhCC
Confidence            999999999998762  2222211       111   23346778899999999999877 8999999999999999999


Q ss_pred             cceEEEEEeCCC
Q 019199          331 VKYRFVIDIQNS  342 (344)
Q Consensus       331 ~~gkvvi~~~~~  342 (344)
                      ..||+||.+.++
T Consensus       413 ~~GKvvv~~~~~  424 (456)
T 3krt_A          413 HQGKVGVLCLAP  424 (456)
T ss_dssp             SSSEEEEESSCS
T ss_pred             CCCcEEEEeCCC
Confidence            999999988653

>3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima}

Probab=100.00  E-value=2.9e-51  Score=384.35  Aligned_cols=308  Identities=19%  Similarity=0.366  Sum_probs=257.7

Q ss_pred             CccceeeccCC-CCCCcEEEEEeeeecccchhhhhcCCCC-------CCCCCCCcccccceEEEEecCCC------CCCC
Q 019199           21 VLSPYSFNRRA-VGSDDVSITITHCGVCYADVIWTRNKHG-------DSKYPLVPGHEIVGIVKEVGHNV------SRFK   86 (344)
Q Consensus        21 ~~~~~~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~-------~~~~p~~~G~e~~G~V~~~G~~~------~~~~   86 (344)
                      .+++++++.|+ |++|||||||.++|||++|++.+.|...       ...+|.++|||++|+|+++|+.+      ++|+
T Consensus        41 ~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~P~i~G~E~~G~V~~vG~~v~~~~~~~~~~  120 (404)
T 3ip1_A           41 EVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTDEEGYILYPGLTGFPVTLGHEFSGVVVEAGPEAINRRTNKRFE  120 (404)
T ss_dssp             EEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBCTTSBBSCCSCBCSSEECCCEEEEEEEEECTTCEETTTTEECC
T ss_pred             ceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCCCCccccccccCCCCcccCccceEEEEEECCCccccccCCCCC
Confidence            67888999999 9999999999999999999999876421       24678999999999999999999      8899


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCC------cccccc
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP------LALAAP  160 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~------~~~aa~  160 (344)
                      +||+|++.+.. .|+.|.+|++|.++.|++....       |....|+|+||+.++++.++++|++++      +.++|+
T Consensus       121 vGdrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~~~~~~~~~aa~  192 (404)
T 3ip1_A          121 IGEPVCAEEML-WCGHCRPCAEGFPNHCENLNEL-------GFNVDGAFAEYVKVDAKYAWSLRELEGVYEGDRLFLAGS  192 (404)
T ss_dssp             TTCEEEECSEE-CCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGEEECGGGBTTBCTHHHHHHHH
T ss_pred             CCCEEEECCcc-CCCCCHHHHCcCcccCcccccc-------CCCCCCCCcceEEechHHeEeccccccccccccchhHHh
Confidence            99999887764 7999999999999999986422       234579999999999999999999886      455889


Q ss_pred             cchhhhHhHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-
Q 019199          161 LLCAGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-  237 (344)
Q Consensus       161 l~~~~~ta~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-  237 (344)
                      ++.++.|||+++... ..+++|++|||+|+|++|++++|+|+.+|+ +|++++.++++++.+ +++|+++++++++.+. 
T Consensus       193 l~~~~~ta~~al~~~~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~  271 (404)
T 3ip1_A          193 LVEPTSVAYNAVIVRGGGIRPGDNVVILGGGPIGLAAVAILKHAGASKVILSEPSEVRRNLA-KELGADHVIDPTKENFV  271 (404)
T ss_dssp             THHHHHHHHHHHTTTSCCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCHHHHHHH-HHHTCSEEECTTTSCHH
T ss_pred             hhhHHHHHHHHHHHhccCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHH-HHcCCCEEEcCCCCCHH
Confidence            999999999999654 367999999999999999999999999999 999999999999888 7999999999876543 


Q ss_pred             --HHHhc--CCccEEEECCCCc-hhHHHHHHhc----ccCCEEEEEcCC-CccccCCceee------e-----echHhHH
Q 019199          238 --MKALG--KSLDFIIDTASGD-HPFDAYMSLL----KVAGVYVLVGFP-SKVKFSPASLN------I-----GGTKDTQ  296 (344)
Q Consensus       238 --~~~~~--~~~dvvid~~g~~-~~~~~~~~~l----~~~G~iv~~g~~-~~~~~~~~~~~------~-----~~~~~~~  296 (344)
                        +.+.+  +++|++||++|++ ..+..+++++    +++|+++.+|.. ....++...+.      .     ...++++
T Consensus       272 ~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~  351 (404)
T 3ip1_A          272 EAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIVGSQGHSGHGTFP  351 (404)
T ss_dssp             HHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCCEEEECSCCCSCEEECHHHHHHTTCEEEECCCCCSTTHHH
T ss_pred             HHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCcEEEEeCCCCCCCcccHHHHhccceEEEEecCCCchHHHH
Confidence              33443  4799999999998 3477777777    999999999977 33343332221      1     1257899


Q ss_pred             HHHHHHHhCCCcc--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          297 EMLEYCAAHKIYP--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       297 ~~~~~~~~g~~~~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      ++++++++| +++  .+ ++|+++++++||+.+.    .||+||+++++
T Consensus       352 ~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~~~~----~GKvvl~~~~~  395 (404)
T 3ip1_A          352 RVISLMASG-MDMTKIISKTVSMEEIPEYIKRLQ----TDKSLVKVTML  395 (404)
T ss_dssp             HHHHHHHTT-CCGGGGCCEEECGGGHHHHHHHTT----TCTTCSCEEEE
T ss_pred             HHHHHHHcC-CChhheEEEEeeHHHHHHHHHHHh----CCcEEEecCCC
Confidence            999999999 754  44 8999999999999887    57888877643

>2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida}

Probab=100.00  E-value=7.7e-51  Score=380.82  Aligned_cols=324  Identities=18%  Similarity=0.215  Sum_probs=264.6

Q ss_pred             eeeeecCCCCCccceeeccCCC-CC-----CcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAV-GS-----DDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-~~-----~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      +++.+. .++.+++++++.|+| .+     +||+|||.++|||++|++++.|..+ ..+|.++|||++|+|+++|+.+++
T Consensus         4 kA~~~~-~~~~l~~~~~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G~V~~vG~~v~~   81 (398)
T 2dph_A            4 KSVVYH-GTRDLRVETVPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITGEVVEKGSDVEL   81 (398)
T ss_dssp             EEEEEE-ETTEEEEEEECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEEEEEEECTTCCS
T ss_pred             EEEEEE-cCCCEEEEEccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEEEEEEECCCCCC
Confidence            344443 346788999999998 68     9999999999999999999988653 467899999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccc------cccccCCCCccCCcceeEEEEecc--eEEEcCCCCCcc
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT------FNAIDADGTITKGGYSSYIVVHER--YCYKIANDYPLA  156 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~------~~~~~~~~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~  156 (344)
                      |++||+|++.+.. .|+.|.+|++|.++.|.+....      ..+.  ......|+|+||++++++  .++++|+++++.
T Consensus        82 ~~vGDrV~~~~~~-~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~--~~~~~~G~~aey~~v~~~~~~~~~iP~~~~~~  158 (398)
T 2dph_A           82 MDIGDLVSVPFNV-ACGRCRNCKEARSDVCENNLVNPDADLGAFGF--DLKGWSGGQAEYVLVPYADYMLLKFGDKEQAM  158 (398)
T ss_dssp             CCTTCEEECCSBC-CCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTT--TBSSCCCSSBSEEEESSHHHHCEECSSHHHHH
T ss_pred             CCCCCEEEEcCCC-CCCCChhhhCcCcccCCCcccccccccccccc--ccCCCCceeeeeEEeccccCeEEECCCCCChh
Confidence            9999999887654 7999999999999999872110      1111  001246999999999987  899999999999


Q ss_pred             c----ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          157 L----AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       157 ~----aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +    ||++++++.|||+++. ...+++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|++ +++
T Consensus       159 ~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~GaG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~-~i~  235 (398)
T 2dph_A          159 EKIKDLTLISDILPTGFHGCV-SAGVKPGSHVYIAGAGPVGRCAAAGARLLGAACVIVGDQNPERLKLL-SDAGFE-TID  235 (398)
T ss_dssp             HTHHHHTTTTTHHHHHHHHHH-HTTCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HTTTCE-EEE
T ss_pred             hhcchhhhhcCHHHHHHHHHH-HcCCCCCCEEEEECCCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH-HHcCCc-EEc
Confidence            8    8899999999999995 4556999999999999999999999999999 999999999999888 689996 788


Q ss_pred             CCCH----HHHHHhc--CCccEEEECCCCch--------------hHHHHHHhcccCCEEEEEcCC-Cc-----------
Q 019199          232 SSDL----EQMKALG--KSLDFIIDTASGDH--------------PFDAYMSLLKVAGVYVLVGFP-SK-----------  279 (344)
Q Consensus       232 ~~~~----~~~~~~~--~~~dvvid~~g~~~--------------~~~~~~~~l~~~G~iv~~g~~-~~-----------  279 (344)
                      +.+.    +.+.+.+  .++|++||++|+..              ++..++++++++|+++.+|.. ..           
T Consensus       236 ~~~~~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~~~~~~~~~~~~~~~  315 (398)
T 2dph_A          236 LRNSAPLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIYVGSDPDPVNKDAGS  315 (398)
T ss_dssp             TTSSSCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCCCSCCSSCSSHHHHT
T ss_pred             CCCcchHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccccccccccccccccC
Confidence            7653    3344443  37999999999753              589999999999999999865 11           


Q ss_pred             --cccCCceee----------eechHhHHHHHHHHHhCCCc--c--ce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          280 --VKFSPASLN----------IGGTKDTQEMLEYCAAHKIY--P--QI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       280 --~~~~~~~~~----------~~~~~~~~~~~~~~~~g~~~--~--~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                        ..++...+.          ....+.++++++++++|+++  +  .+ ++|+++++++||+.+.+++. ||+||+++..
T Consensus       316 ~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvv~~~~~  394 (398)
T 2dph_A          316 GRLHLDFGKMWTKSIRIMTGMAPVTNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGYAKFDKGSP-AKFVIDPHGM  394 (398)
T ss_dssp             TEEEEEHHHHHHTTCEEECSSCCGGGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHHHHHHTTCS-CEEEECTTSC
T ss_pred             CcccccHHHHhhcCCEEEEeccCcHHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHHHHHhcCCc-eEEEEecCcc
Confidence              112111111          12346789999999999998  6  34 89999999999999999887 9999998765


Q ss_pred             C
Q 019199          343 L  343 (344)
Q Consensus       343 ~  343 (344)
                      .
T Consensus       395 ~  395 (398)
T 2dph_A          395 L  395 (398)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=2.3e-50  Score=377.84  Aligned_cols=327  Identities=20%  Similarity=0.219  Sum_probs=264.0

Q ss_pred             eeeeecCCCCCccceeeccCCCC-CCc------EEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVG-SDD------VSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~-~~e------vlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      +++++. .++.+++++++.|+|. ++|      |||||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|++++
T Consensus         4 ka~~~~-~~~~l~~~~~p~P~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~G~V~~vG~~v~   81 (398)
T 1kol_A            4 RGVVYL-GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDVE   81 (398)
T ss_dssp             EEEEEE-ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTCC
T ss_pred             EEEEEe-cCCceEEEEecCCCCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccEEEEEEECCCCC
Confidence            344443 3457889999999997 898      99999999999999999988653 45789999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccc--cccCC-CCccCCcceeEEEEecc--eEEEcCCCCCccc-
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFN--AIDAD-GTITKGGYSSYIVVHER--YCYKIANDYPLAL-  157 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~--~~~~~-~~~~~g~~~~~~~~~~~--~~~~~P~~~~~~~-  157 (344)
                      +|++||+|++.+. ..|+.|.+|++|.++.|++......  ..+.. .....|+|+||++++++  .++++|+++++.+ 
T Consensus        82 ~~~vGDrV~~~~~-~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~~~~P~~~~~~~~  160 (398)
T 1kol_A           82 NLQIGDLVSVPFN-VACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEK  160 (398)
T ss_dssp             SCCTTCEEECCSE-ECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHT
T ss_pred             cCCCCCEEEECCc-CCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeEEECCCCcchhhh
Confidence            9999999987654 4899999999999999987631100  01110 01245999999999986  8999999999888 


Q ss_pred             ---ccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          158 ---AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       158 ---aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                         +|++++++.|||+++.. ..+++|++|||+|+|++|++++|+||.+|+ +|++++.++++++.+ +++|++ ++++.
T Consensus       161 ~~~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~GaG~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~~~a-~~lGa~-~i~~~  237 (398)
T 1kol_A          161 IRDLTCLSDILPTGYHGAVT-AGVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFE-IADLS  237 (398)
T ss_dssp             HHHHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCE-EEETT
T ss_pred             cccccccccHHHHHHHHHHH-cCCCCCCEEEEECCcHHHHHHHHHHHHCCCCeEEEEcCCHHHHHHH-HHcCCc-EEccC
Confidence               78899999999999975 456999999999999999999999999999 799999999999888 799997 77875


Q ss_pred             CH----HHHHHhc--CCccEEEECCCCch---------------hHHHHHHhcccCCEEEEEcCC-Cc------------
Q 019199          234 DL----EQMKALG--KSLDFIIDTASGDH---------------PFDAYMSLLKVAGVYVLVGFP-SK------------  279 (344)
Q Consensus       234 ~~----~~~~~~~--~~~dvvid~~g~~~---------------~~~~~~~~l~~~G~iv~~g~~-~~------------  279 (344)
                      +.    +.+.+.+  +++|++||++|+..               ++..++++++++|+++.+|.. ..            
T Consensus       238 ~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~  317 (398)
T 1kol_A          238 LDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIG  317 (398)
T ss_dssp             SSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTT
T ss_pred             CcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEeccccCCcccccccccccc
Confidence            42    2344443  47999999999762               589999999999999999864 11            


Q ss_pred             -cccCCceee------e----echHhHHHHHHHHHhCCCc---cc-eEEEeCccHHHHHHHHHcCCcceEEEEEeCCCCC
Q 019199          280 -VKFSPASLN------I----GGTKDTQEMLEYCAAHKIY---PQ-IETIPIENVNEALERLIKRDVKYRFVIDIQNSLK  344 (344)
Q Consensus       280 -~~~~~~~~~------~----~~~~~~~~~~~~~~~g~~~---~~-~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~~  344 (344)
                       ..++...+.      .    ...+.++++++++.+|+++   +. .++|+++++++||+.+.+++. ||+||+++..++
T Consensus       318 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvvi~~~~~~~  396 (398)
T 1kol_A          318 SLSIRFGLGWAKSHSFHTGQTPVMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGYGEFDAGVP-KKFVIDPHKTFS  396 (398)
T ss_dssp             CCCCCHHHHHHTTCEEEESSCCHHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHHHHHHHTCS-CEEEECTTCSSC
T ss_pred             cccccHHHHhhcccEEEecccChHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHHHHHhCCCc-eEEEEEeCCccc
Confidence             111111111      1    1235688999999999998   33 489999999999999999887 999999987653

>3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A*

Probab=100.00  E-value=5.4e-50  Score=366.78  Aligned_cols=300  Identities=19%  Similarity=0.267  Sum_probs=252.2

Q ss_pred             ccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCC
Q 019199            3 SETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus         3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      +++.+||+..+..++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|..+ ..+|.++|||++|+|+++|+++
T Consensus         4 ~~p~~mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G~V~~vG~~v   82 (334)
T 3qwb_A            4 TIPEQQKVILIDEIGGYDVIKYEDYPVPSISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASGTVVAKGKGV   82 (334)
T ss_dssp             -CCSEEEEEEESSSSSGGGEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEEEEEEECTTC
T ss_pred             CCchheEEEEEecCCCCceeEEEeccCCCCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEEEEEEECCCC
Confidence            334455544444333445588899999999999999999999999999999988775 4579999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEe-cceEEEcCCCCCccc---c
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVH-ERYCYKIANDYPLAL---A  158 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~P~~~~~~~---a  158 (344)
                      ++|++||+|+..                                    ..|+|+||+.++ ++.++++|+++++++   |
T Consensus        83 ~~~~~GdrV~~~------------------------------------~~G~~aey~~v~~~~~~~~~P~~~~~~~~~~a  126 (334)
T 3qwb_A           83 TNFEVGDQVAYI------------------------------------SNSTFAQYSKISSQGPVMKLPKGTSDEELKLY  126 (334)
T ss_dssp             CSCCTTCEEEEE------------------------------------CSSCSBSEEEEETTSSEEECCTTCCHHHHHHH
T ss_pred             CCCCCCCEEEEe------------------------------------eCCcceEEEEecCcceEEECCCCCCHHHhhhh
Confidence            999999999752                                    258999999999 999999999999999   8


Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      +++++.+.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++.+ +++|++.++++++.+.
T Consensus       127 a~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~~~~~~~~~~  205 (334)
T 3qwb_A          127 AAGLLQVLTALSFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIA-KEYGAEYLINASKEDI  205 (334)
T ss_dssp             HHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTTSCH
T ss_pred             hhhhhHHHHHHHHHHHhccCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEEeCCCchH
Confidence            8899999999999988878899999999995 9999999999999999999999999999887 7899999999876544


Q ss_pred             H---HHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccCCceee------e--------ech----
Q 019199          238 M---KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLN------I--------GGT----  292 (344)
Q Consensus       238 ~---~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~------~--------~~~----  292 (344)
                      .   .+.+  +++|++||++|.. .+..++++++++|+++.+|.. .. ..++...+.      .        ..+    
T Consensus       206 ~~~~~~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (334)
T 3qwb_A          206 LRQVLKFTNGKGVDASFDSVGKD-TFEISLAALKRKGVFVSFGNASGLIPPFSITRLSPKNITLVRPQLYGYIADPEEWK  284 (334)
T ss_dssp             HHHHHHHTTTSCEEEEEECCGGG-GHHHHHHHEEEEEEEEECCCTTCCCCCBCGGGGTTTTCEEECCCGGGGSCSHHHHH
T ss_pred             HHHHHHHhCCCCceEEEECCChH-HHHHHHHHhccCCEEEEEcCCCCCCCCcchhhhhhCceEEEEEEeccccCCHHHHH
Confidence            3   3333  5799999999985 499999999999999999975 21 122221111      0        112    


Q ss_pred             HhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          293 KDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       293 ~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +.++++++++++|++++.+ ++|+++++++||+.+.+++..||+||++++
T Consensus       285 ~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q  334 (334)
T 3qwb_A          285 YYSDEFFGLVNSKKLNIKIYKTYPLRDYRTAAADIESRKTVGKLVLEIPQ  334 (334)
T ss_dssp             HHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred             HHHHHHHHHHHCCCccCceeeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence            2357899999999999876 899999999999999999999999999864

>2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A*

Probab=100.00  E-value=4.7e-51  Score=377.02  Aligned_cols=316  Identities=17%  Similarity=0.166  Sum_probs=260.0

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCC---CCCcccccceEEEEecCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKY---PLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~---p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      +++...++...+++++++.|+|++|||||||.++|||++|++++.|..+...+   |.++|||++| |+++|++ ++|++
T Consensus         2 kA~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G-V~~vG~~-~~~~v   79 (357)
T 2b5w_A            2 KAIAVKRGEDRPVVIEKPRPEPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHEAVG-VVVDPND-TELEE   79 (357)
T ss_dssp             EEEEEETTCSSCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSEEEE-EEEECTT-SSCCT
T ss_pred             eEEEEeCCCCceEEEECCCCCCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCceeEE-EEEECCC-CCCCC
Confidence            34444443335899999999999999999999999999999999886654456   8999999999 9999999 99999


Q ss_pred             CCEEEEeccccC--CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           88 GDHVGVGTYVNS--CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        88 Gd~V~~~~~~~~--c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ||+|++.+.. .  |++|.+|++|.++.|++......+.    ....|+|+||++++++.++++|++++ + +|+++.++
T Consensus        80 GdrV~~~~~~-~~~cg~C~~C~~g~~~~C~~~~~~~~g~----~~~~G~~aey~~v~~~~~~~iP~~~~-~-~aal~~~~  152 (357)
T 2b5w_A           80 GDIVVPTVRR-PPASGTNEYFERDQPDMAPDGMYFERGI----VGAHGYMSEFFTSPEKYLVRIPRSQA-E-LGFLIEPI  152 (357)
T ss_dssp             TCEEEECSEE-CCTTCCCHHHHTTCGGGCCTTSCEEETT----BEECCSCBSEEEEEGGGEEECCGGGS-T-TGGGHHHH
T ss_pred             CCEEEECCcC-CCCCCCChHHhCcCcccCCCCcccccCc----cCCCcceeeEEEEchHHeEECCCCcc-h-hhhhhchH
Confidence            9999887654 4  9999999999999999864321010    02358999999999999999999999 5 55688899


Q ss_pred             hHhHHHHHhccCCCCC------CEEEEECCChHHHHH-HHHH-HHCCCe-EEEEeCCch---hHHHHHHhCCCcEEEeCC
Q 019199          166 ITVYTPMMRHKMNQPG------KSLGVIGLGGLGHMA-VKFG-KAFGLN-VTVLSTSTS---KKEEALSLLGADKFVVSS  233 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g------~~vlI~Gag~~G~~a-i~~a-~~~g~~-V~~~~~~~~---~~~~~~~~~g~~~~v~~~  233 (344)
                      .|||+++.. ..+++|      ++|||+|+|++|+++ +|+| +.+|++ |++++++++   +++.+ +++|++++ +++
T Consensus       153 ~ta~~al~~-~~~~~g~~~~~~~~VlV~GaG~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~-~~lGa~~v-~~~  229 (357)
T 2b5w_A          153 SITEKALEH-AYASRSAFDWDPSSAFVLGNGSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDII-EELDATYV-DSR  229 (357)
T ss_dssp             HHHHHHHHH-HHHTTTTSCCCCCEEEEECCSHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHH-HHTTCEEE-ETT
T ss_pred             HHHHHHHHh-cCCCCCcccCCCCEEEEECCCHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHH-HHcCCccc-CCC
Confidence            999999955 445999      999999999999999 9999 999996 999999998   88888 79999998 876


Q ss_pred             CHHH--HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCcee----e----------eechHhH
Q 019199          234 DLEQ--MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASL----N----------IGGTKDT  295 (344)
Q Consensus       234 ~~~~--~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~----~----------~~~~~~~  295 (344)
                      +.+.  +.+..+++|++||++|++.++..++++++++|+++.+|...  ..+++...+    .          ....+++
T Consensus       230 ~~~~~~i~~~~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  309 (357)
T 2b5w_A          230 QTPVEDVPDVYEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDWAFEVDAGAFHREMVLHNKALVGSVNSHVEHF  309 (357)
T ss_dssp             TSCGGGHHHHSCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCCCCCCCHHHHHHHHHHTTCEEEECCCCCHHHH
T ss_pred             ccCHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCCCceecHHHHhHHHHhCCeEEEEeccCCHHHH
Confidence            5321  33333489999999999866999999999999999998762  233333222    1          2235789


Q ss_pred             HHHHHHHHhC--C-Cccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          296 QEMLEYCAAH--K-IYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       296 ~~~~~~~~~g--~-~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +++++++++|  + +++.+ ++|+++++++|++.+   +..||+||++++
T Consensus       310 ~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~  356 (357)
T 2b5w_A          310 EAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST  356 (357)
T ss_dssp             HHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred             HHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence            9999999999  8 57766 899999999999988   347899999864

>4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli}

Probab=100.00  E-value=5e-50  Score=369.55  Aligned_cols=299  Identities=20%  Similarity=0.252  Sum_probs=252.1

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCC
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      |+.+||+..+..++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+++
T Consensus        25 ~p~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~v  104 (353)
T 4dup_A           25 LPQEMRFVDLKSFGGPDVMVIGKRPLPVAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSGEIVGVGPGV  104 (353)
T ss_dssp             CCSSEEEEEESSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEEEEEEECTTC
T ss_pred             CChheeEEEEccCCCccceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEEEEEEECCCC
Confidence            34445555544444466789999999999999999999999999999999988765 33578999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                      ++|++||+|+..+                                   ..|+|+||+.+|++.++++|+++++++||+++
T Consensus       105 ~~~~vGdrV~~~~-----------------------------------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~  149 (353)
T 4dup_A          105 SGYAVGDKVCGLA-----------------------------------NGGAYAEYCLLPAGQILPFPKGYDAVKAAALP  149 (353)
T ss_dssp             CSCCTTCEEEEEC-----------------------------------SSCCSBSEEEEEGGGEEECCTTCCHHHHHTSH
T ss_pred             CCCCCCCEEEEec-----------------------------------CCCceeeEEEEcHHHcEeCCCCCCHHHHhhhh
Confidence            9999999997532                                   35899999999999999999999999999999


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH--
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--  239 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--  239 (344)
                      +++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++.+ +++|++.++++++.+...  
T Consensus       150 ~~~~ta~~~l~~~~~~~~g~~VlV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~  228 (353)
T 4dup_A          150 ETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEAC-ERLGAKRGINYRSEDFAAVI  228 (353)
T ss_dssp             HHHHHHHHHHTTTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHH
T ss_pred             hHHHHHHHHHHHhcCCCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEeCCchHHHHHH
Confidence            999999999977777899999999965 9999999999999999999999999999888 689999999987654332  


Q ss_pred             -Hh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-c-cc-cCCceee------e----ech----------Hh
Q 019199          240 -AL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-K-VK-FSPASLN------I----GGT----------KD  294 (344)
Q Consensus       240 -~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~-~~-~~~~~~~------~----~~~----------~~  294 (344)
                       +. .+++|++||++|... +..++++++++|+++.+|... . .. ++...+.      .    ...          +.
T Consensus       229 ~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~  307 (353)
T 4dup_A          229 KAETGQGVDIILDMIGAAY-FERNIASLAKDGCLSIIAFLGGAVAEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDL  307 (353)
T ss_dssp             HHHHSSCEEEEEESCCGGG-HHHHHHTEEEEEEEEECCCTTCSEEEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHH
T ss_pred             HHHhCCCceEEEECCCHHH-HHHHHHHhccCCEEEEEEecCCCcccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHH
Confidence             22 468999999999875 999999999999999999762 1 11 2222111      1    111          12


Q ss_pred             HHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          295 TQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       295 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++++++++++|++++.+ ++|+++++++|++.+.+++..||+||++
T Consensus       308 ~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~gKvvl~~  353 (353)
T 4dup_A          308 LSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV  353 (353)
T ss_dssp             HHHTHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred             HHHHHHHHHCCCccCCcceEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence            78899999999999876 8999999999999999999999999975

>3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis}

Probab=100.00  E-value=2.4e-50  Score=366.15  Aligned_cols=289  Identities=17%  Similarity=0.250  Sum_probs=239.7

Q ss_pred             eeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           10 CLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        10 ~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      ++++.+.++++.+++++.+.|+|++|||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|++||
T Consensus         5 Mka~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~vGd   84 (315)
T 3goh_A            5 HQVWAYQTKTHSVTLNSVDIPALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAGVIVKVGAKVDSKMLGR   84 (315)
T ss_dssp             EEEEEEETTTTEEEEEEEECCCCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEEEEEEECTTSCGGGTTC
T ss_pred             eEEEEEeCCCCeeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEEEEEEeCCCCCCCCCCC
Confidence            45566554678899999999999999999999999999999999998877668899999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|+..+.                                ....|+|+||+.+|++.++++|+++++++||++++++.|||
T Consensus        85 rV~~~~~--------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  132 (315)
T 3goh_A           85 RVAYHTS--------------------------------LKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPCPLLTAW  132 (315)
T ss_dssp             EEEEECC--------------------------------TTSCCSSBSEEEEETTSEEECCTTSCHHHHHTSHHHHHHHH
T ss_pred             EEEEeCC--------------------------------CCCCcccccEEEEcHHHhccCcCCCCHHHHhhCccHHHHHH
Confidence            9986432                                13469999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEE
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      +++ +...+++|++|||+|+|++|++++|+||.+|++|++++ ++++++.+ +++|++++++  +   .+++.+++|++|
T Consensus       133 ~al-~~~~~~~g~~VlV~GaG~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~-~~lGa~~v~~--d---~~~v~~g~Dvv~  204 (315)
T 3goh_A          133 QAF-EKIPLTKQREVLIVGFGAVNNLLTQMLNNAGYVVDLVS-ASLSQALA-AKRGVRHLYR--E---PSQVTQKYFAIF  204 (315)
T ss_dssp             HHH-TTSCCCSCCEEEEECCSHHHHHHHHHHHHHTCEEEEEC-SSCCHHHH-HHHTEEEEES--S---GGGCCSCEEEEE
T ss_pred             HHH-hhcCCCCCCEEEEECCCHHHHHHHHHHHHcCCEEEEEE-ChhhHHHH-HHcCCCEEEc--C---HHHhCCCccEEE
Confidence            999 66667999999999999999999999999999999999 88888888 7899999884  2   333467899999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCc--ee--e---------eech-------HhHHHHHHHHHhCCCc
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPA--SL--N---------IGGT-------KDTQEMLEYCAAHKIY  308 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~--~~--~---------~~~~-------~~~~~~~~~~~~g~~~  308 (344)
                      |++|++. +..++++++++|+++.+|.. ....++.+  .+  .         ....       +.++++++++++|+++
T Consensus       205 d~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  283 (315)
T 3goh_A          205 DAVNSQN-AAALVPSLKANGHIICIQDRIPAPIDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKME  283 (315)
T ss_dssp             CC--------TTGGGEEEEEEEEEECCC----------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSC
T ss_pred             ECCCchh-HHHHHHHhcCCCEEEEEeCCCCccccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcc
Confidence            9999987 68899999999999999765 22222211  11  1         0111       2468899999999999


Q ss_pred             cce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          309 PQI-ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       309 ~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      +.+ ++|+++++++|++.+.  +..||+|+++++
T Consensus       284 ~~i~~~~~l~~~~~A~~~~~--~~~gKvvi~~~~  315 (315)
T 3goh_A          284 IAAPDIFRFEQMIEALDHSE--QTKLKTVLTLNE  315 (315)
T ss_dssp             CCCCEEEEGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred             cccceEecHHHHHHHHHHHH--hcCCcEEEEecC
Confidence            876 8999999999999998  667999999863

>3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A*

Probab=100.00  E-value=1.4e-49  Score=362.64  Aligned_cols=296  Identities=24%  Similarity=0.290  Sum_probs=253.9

Q ss_pred             ccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      |||+..+..++.++.+++++.+.|+|++|||+|||.++|+|++|++.+.|..+...+|.++|||++|+|+++|+++++|+
T Consensus         1 MMkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~   80 (325)
T 3jyn_A            1 MAKRIQFSTVGGPEVLEYVDFEPEAPGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAGVVEAVGDEVTRFK   80 (325)
T ss_dssp             CEEEEEBSSCSSGGGCEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEEEEEEECTTCCSCC
T ss_pred             CcEEEEEecCCCcceeEEeecCCCCCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEEEEEEECCCCCCCC
Confidence            46666666655667789999999999999999999999999999999999877667899999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+...                                  ...|+|+||+.++++.++++|+++++++||++++.+.
T Consensus        81 ~GdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~l~~~~~  126 (325)
T 3jyn_A           81 VGDRVAYGT----------------------------------GPLGAYSEVHVLPEANLVKLADSVSFEQAAALMLKGL  126 (325)
T ss_dssp             TTCEEEESS----------------------------------SSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHH
T ss_pred             CCCEEEEec----------------------------------CCCccccceEEecHHHeEECCCCCCHHHHhhhhhhHH
Confidence            999997522                                  2358999999999999999999999999999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---HHhc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---KALG  242 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---~~~~  242 (344)
                      |||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++.+ +++|+++++++++.+..   .+.+
T Consensus       127 ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~~~~~  205 (325)
T 3jyn_A          127 TVQYLLRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHA-KALGAWETIDYSHEDVAKRVLELT  205 (325)
T ss_dssp             HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHT
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCCccHHHHHHHHh
Confidence            99999988888899999999995 9999999999999999999999999999888 68999999998765433   3333


Q ss_pred             --CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Ccc-ccCCcee------e---------eech----HhHHHHH
Q 019199          243 --KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKV-KFSPASL------N---------IGGT----KDTQEML  299 (344)
Q Consensus       243 --~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~-~~~~~~~------~---------~~~~----~~~~~~~  299 (344)
                        +++|++||++|... +..++++++++|+++.+|.. ... .++...+      .         ...+    +.+++++
T Consensus       206 ~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (325)
T 3jyn_A          206 DGKKCPVVYDGVGQDT-WLTSLDSVAPRGLVVSFGNASGPVSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELF  284 (325)
T ss_dssp             TTCCEEEEEESSCGGG-HHHHHTTEEEEEEEEECCCTTCCCCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHH
T ss_pred             CCCCceEEEECCChHH-HHHHHHHhcCCCEEEEEecCCCCCCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHH
Confidence              57999999999854 99999999999999999976 221 2222111      1         1112    2346899


Q ss_pred             HHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          300 EYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       300 ~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++++|++++.+ ++|+++++++||+.+.+++..||+||.
T Consensus       285 ~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~Gkvvl~  324 (325)
T 3jyn_A          285 DMLASGKLKVDGIEQYALKDAAKAQIELSARRTTGSTILI  324 (325)
T ss_dssp             HHHHTTSSCCCCCEEEEGGGHHHHHHHHHTTCCCSCEEEE
T ss_pred             HHHHCCCeeCccccEEcHHHHHHHHHHHHcCCCCceEEEe
Confidence            999999999876 899999999999999999999999986

>3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii}

Probab=100.00  E-value=2.2e-49  Score=360.79  Aligned_cols=299  Identities=18%  Similarity=0.197  Sum_probs=249.2

Q ss_pred             ccceeeeeecC--CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-----CCCCCCCCcccccceEEEEec
Q 019199            7 SKDCLGWAARD--PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-----GDSKYPLVPGHEIVGIVKEVG   79 (344)
Q Consensus         7 ~~~~~~~~~~~--~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-----~~~~~p~~~G~e~~G~V~~~G   79 (344)
                      |++++++.+.+  .++.+++++.+.|+|++|||+|||.++|||++|++.+.|..     ....+|.++|||++|+|+++|
T Consensus         4 m~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~vG   83 (321)
T 3tqh_A            4 MKEMKAIQFDQFGPPKVLKLVDTPTPEYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDFSGEVIELG   83 (321)
T ss_dssp             -CEEEEEEESSSCSGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEEEEEEEEEC
T ss_pred             cccceEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCcccceeEEEEEEeC
Confidence            34455555543  34558899999999999999999999999999999988831     235678999999999999999


Q ss_pred             CCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccc
Q 019199           80 HNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAA  159 (344)
Q Consensus        80 ~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa  159 (344)
                      +++++|++||+|+..+..                               ....|+|+||+.++++.++++|+++++++||
T Consensus        84 ~~v~~~~~GdrV~~~~~~-------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa  132 (321)
T 3tqh_A           84 SDVNNVNIGDKVMGIAGF-------------------------------PDHPCCYAEYVCASPDTIIQKLEKLSFLQAA  132 (321)
T ss_dssp             TTCCSCCTTCEEEEECST-------------------------------TTCCCCSBSEEEECGGGEEECCTTSCHHHHH
T ss_pred             CCCCCCCCCCEEEEccCC-------------------------------CCCCCcceEEEEecHHHhccCCCCCCHHHHh
Confidence            999999999999865421                               0235899999999999999999999999999


Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      ++++++.|||+++ +...+++|++|||+| +|++|++++|+|+.+|++|++++ ++++++.+ +++|+++++++++.+..
T Consensus       133 ~l~~~~~ta~~al-~~~~~~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~-~~lGa~~~i~~~~~~~~  209 (321)
T 3tqh_A          133 SLPTAGLTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFL-KALGAEQCINYHEEDFL  209 (321)
T ss_dssp             HSHHHHHHHHHHH-HHTTCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHH-HHHTCSEEEETTTSCHH
T ss_pred             hhhhHHHHHHHHH-HhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHH-HHcCCCEEEeCCCcchh
Confidence            9999999999999 556669999999997 59999999999999999999887 45566666 78999999998877634


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-ccc-----cCCceee----eechHhHHHHHHHHHhCCCc
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-KVK-----FSPASLN----IGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-~~~-----~~~~~~~----~~~~~~~~~~~~~~~~g~~~  308 (344)
                      .+..+++|++||++|++. ...++++++++|+++.+|... ...     .....+.    ....++++++++++++|+++
T Consensus       210 ~~~~~g~D~v~d~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  288 (321)
T 3tqh_A          210 LAISTPVDAVIDLVGGDV-GIQSIDCLKETGCIVSVPTITAGRVIEVAKQKHRRAFGLLKQFNIEELHYLGKLVSEDKLR  288 (321)
T ss_dssp             HHCCSCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCSTTHHHHHHHHHHTTCEEECCCCCCCHHHHHHHHHHHHTTSSC
T ss_pred             hhhccCCCEEEECCCcHH-HHHHHHhccCCCEEEEeCCCCchhhhhhhhhcceEEEEEecCCCHHHHHHHHHHHHCCCcc
Confidence            444478999999999987 699999999999999998651 111     1111111    23457899999999999999


Q ss_pred             cce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          309 PQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       309 ~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      +.+ ++|+++++++||+.+.+++..||+|+++.
T Consensus       289 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~  321 (321)
T 3tqh_A          289 IEISRIFQLSEAVTAHELLETGHVRGKLVFKVR  321 (321)
T ss_dssp             CCEEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             cccccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence            876 89999999999999999999999999863

>3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis}

Probab=100.00  E-value=1.7e-49  Score=364.27  Aligned_cols=302  Identities=17%  Similarity=0.199  Sum_probs=250.2

Q ss_pred             cccccceeeeeecCCC-CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCC
Q 019199            4 ETASKDCLGWAARDPS-GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHN   81 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~-~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~   81 (344)
                      |+.+||+..+..++.+ +.+++++.+.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++
T Consensus         1 M~~~mka~~~~~~g~p~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~vG~~   80 (340)
T 3gms_A            1 MSLHGKLIQFHKFGNPKDVLQVEYKNIEPLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVGIVENVGAF   80 (340)
T ss_dssp             -CCEEEEEEESSCSCHHHHEEEEEEECCCCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEEEEEEECTT
T ss_pred             CCcccEEEEEecCCCchheEEEEecCCCCCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEEEEEEeCCC
Confidence            3333444444433322 3388999999999999999999999999999999998765 3478999999999999999999


Q ss_pred             CCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccccc
Q 019199           82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPL  161 (344)
Q Consensus        82 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l  161 (344)
                      +++|++||+|+..                                   ...|+|+||+.+|++.++++|+++++++||++
T Consensus        81 v~~~~vGdrV~~~-----------------------------------~~~G~~aey~~v~~~~~~~vP~~l~~~~aa~l  125 (340)
T 3gms_A           81 VSRELIGKRVLPL-----------------------------------RGEGTWQEYVKTSADFVVPIPDSIDDFTAAQM  125 (340)
T ss_dssp             SCGGGTTCEEEEC-----------------------------------SSSCSSBSEEEEEGGGEEECCTTSCHHHHTTS
T ss_pred             CCCCCCCCEEEec-----------------------------------CCCccceeEEEcCHHHeEECCCCCCHHHHhhh
Confidence            9999999999742                                   23589999999999999999999999999999


Q ss_pred             chhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH--
Q 019199          162 LCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM--  238 (344)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~--  238 (344)
                      ++.+.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++++.+.+..  
T Consensus       126 ~~~~~ta~~~~~~~~~~~~g~~VlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~lga~~~~~~~~~~~~~~  204 (340)
T 3gms_A          126 YINPLTAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEEL-LRLGAAYVIDTSTAPLYET  204 (340)
T ss_dssp             SHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEEETTTSCHHHH
T ss_pred             cchHHHHHHHHHHhcccCCCCEEEEeCCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhCCCcEEEeCCcccHHHH
Confidence            9999999999988888899999999998 6999999999999999999999999999888 68999999998765433  


Q ss_pred             -HHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccC--------Cceee-------------eechHh
Q 019199          239 -KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFS--------PASLN-------------IGGTKD  294 (344)
Q Consensus       239 -~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~--------~~~~~-------------~~~~~~  294 (344)
                       .+.+  +++|++||++|... ...++++++++|+++.+|......++        ...+.             ....+.
T Consensus       205 ~~~~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  283 (340)
T 3gms_A          205 VMELTNGIGADAAIDSIGGPD-GNELAFSLRPNGHFLTIGLLSGIQVNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQET  283 (340)
T ss_dssp             HHHHTTTSCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCTTSCCCCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHH
T ss_pred             HHHHhCCCCCcEEEECCCChh-HHHHHHHhcCCCEEEEEeecCCCCCCHHHhhhcccceEEEEEehhhhhhcCHHHHHHH
Confidence             3333  48999999999887 67778999999999999976221111        11111             111367


Q ss_pred             HHHHHHHHHhCCCcc-c-eEEEeCccHHHHHHHHHcCCcc-eEEEEEeCCC
Q 019199          295 TQEMLEYCAAHKIYP-Q-IETIPIENVNEALERLIKRDVK-YRFVIDIQNS  342 (344)
Q Consensus       295 ~~~~~~~~~~g~~~~-~-~~~~~~~~~~~a~~~~~~~~~~-gkvvi~~~~~  342 (344)
                      ++++++++++|++++ . .++|+++++++||+.+.+++.. ||+++++.++
T Consensus       284 ~~~~~~l~~~g~l~~~~i~~~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~~  334 (340)
T 3gms_A          284 FRHLIRLVENEQLRFMKVHSTYELADVKAAVDVVQSAEKTKGKVFLTSYEG  334 (340)
T ss_dssp             HHHHHHHHHTTSSCCCCEEEEEEGGGHHHHHHHHHCTTCCSSEEEEECC--
T ss_pred             HHHHHHHHHcCCCccccccEEEeHHHHHHHHHHHHhcCCCCCeEEEEEecc
Confidence            899999999999987 3 4899999999999999999854 9999998764

>4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus}

Probab=100.00  E-value=8.8e-49  Score=359.69  Aligned_cols=293  Identities=23%  Similarity=0.341  Sum_probs=244.2

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      .+||+..+..++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++++ 
T Consensus        20 ~~MkA~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~vG~~v~-   98 (342)
T 4eye_A           20 GSMKAIQAQSLSGPEGLVYTDVETPGAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAGVVRSAPEGSG-   98 (342)
T ss_dssp             CEEEEEEECSSSGGGGEEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEEEEEECCTTSS-
T ss_pred             cceEEEEEecCCCCceeEEEeCCCCCCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEEEEEEECCCCC-
Confidence            344444444444466689999999999999999999999999999999998765 347899999999999999999999 


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++||+|+...                                   ..|+|+||+.++++.++++|+++++++||+++++
T Consensus        99 ~~vGDrV~~~~-----------------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~  143 (342)
T 4eye_A           99 IKPGDRVMAFN-----------------------------------FIGGYAERVAVAPSNILPTPPQLDDAEAVALIAN  143 (342)
T ss_dssp             CCTTCEEEEEC-----------------------------------SSCCSBSEEEECGGGEEECCTTSCHHHHHHHTTH
T ss_pred             CCCCCEEEEec-----------------------------------CCCcceEEEEEcHHHeEECCCCCCHHHHHHhhhH
Confidence            99999997542                                   3589999999999999999999999999999999


Q ss_pred             hhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHH
Q 019199          165 GITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKA  240 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~  240 (344)
                      +.|||+++.+...+++|++|||+|+ |++|++++|+++.+|++|+++++++++++.+ +++|++.+++++ .+.   +.+
T Consensus       144 ~~ta~~~l~~~~~~~~g~~VlV~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~v~~~~-~~~~~~v~~  221 (342)
T 4eye_A          144 YHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFV-KSVGADIVLPLE-EGWAKAVRE  221 (342)
T ss_dssp             HHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEESS-TTHHHHHHH
T ss_pred             HHHHHHHHHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEecCc-hhHHHHHHH
Confidence            9999999977777899999999998 9999999999999999999999999999888 689999999887 433   333


Q ss_pred             hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccCCceee------eec-------------hHhHHH
Q 019199          241 LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLN------IGG-------------TKDTQE  297 (344)
Q Consensus       241 ~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~------~~~-------------~~~~~~  297 (344)
                      .+  +++|++||++|++. +..++++++++|+++.+|.. .. ..++...+.      .+.             .+.+++
T Consensus       222 ~~~~~g~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~  300 (342)
T 4eye_A          222 ATGGAGVDMVVDPIGGPA-FDDAVRTLASEGRLLVVGFAAGGIPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAG  300 (342)
T ss_dssp             HTTTSCEEEEEESCC--C-HHHHHHTEEEEEEEEEC----------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHH
T ss_pred             HhCCCCceEEEECCchhH-HHHHHHhhcCCCEEEEEEccCCCCCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHH
Confidence            33  47999999999875 99999999999999999865 21 122222111      111             146889


Q ss_pred             HHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEE
Q 019199          298 MLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVID  338 (344)
Q Consensus       298 ~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~  338 (344)
                      +++++++| +++.+ ++|+++++++||+.+.+++..||+||+
T Consensus       301 ~~~l~~~g-l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~  341 (342)
T 4eye_A          301 LEKLVAEG-MRPPVSARIPLSEGRQALQDFADGKVYGKMVLV  341 (342)
T ss_dssp             HHHHHHTT-CCCCEEEEEEGGGHHHHHHHHHTTCCCSEEEEE
T ss_pred             HHHHHHcC-CCCCcceEEeHHHHHHHHHHHHhCCCCceEEEe
Confidence            99999999 98876 899999999999999999999999986

>3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus}

Probab=100.00  E-value=1.4e-48  Score=358.90  Aligned_cols=301  Identities=21%  Similarity=0.295  Sum_probs=249.6

Q ss_pred             cceeeeeecC---CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC
Q 019199            8 KDCLGWAARD---PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         8 ~~~~~~~~~~---~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      ||+..+..++   +++.+++++.+.|+|++|||+|||.+++||++|++.+.|.  ...+|.++|||++|+|+++|+++++
T Consensus         3 MkA~~~~~~G~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G~V~~vG~~v~~   80 (346)
T 3fbg_A            3 LKAIGFEQPFKLSDGNLFKTFNLDIPEPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIGVVESVGNEVTM   80 (346)
T ss_dssp             EEEEEBSSCCCGGGCCCCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEEEEEEECTTCCS
T ss_pred             cEEEEEEeccccCCCceeEeccccCCCCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEEEEEEeCCCCCc
Confidence            4444444433   4678999999999999999999999999999999988876  3567899999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++||+|+....                                ....|+|+||++++++.++++|+++++++||.++++
T Consensus        81 ~~~GdrV~~~~~--------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~  128 (346)
T 3fbg_A           81 FNQGDIVYYSGS--------------------------------PDQNGSNAEYQLINERLVAKAPKNISAEQAVSLPLT  128 (346)
T ss_dssp             CCTTCEEEECCC--------------------------------TTSCCSSBSEEEEEGGGEEECCSSSCHHHHTTSHHH
T ss_pred             CCCCCEEEEcCC--------------------------------CCCCcceeEEEEEChHHeEECCCCCCHHHhhhcchh
Confidence            999999975221                                134699999999999999999999999999999999


Q ss_pred             hhHhHHHHHhccCCC------CCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH--
Q 019199          165 GITVYTPMMRHKMNQ------PGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL--  235 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~------~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~--  235 (344)
                      +.|||+++.+...++      +|++|||+| +|++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.  
T Consensus       129 ~~ta~~~l~~~~~~~~~~~~~~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~  207 (346)
T 3fbg_A          129 GITAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWT-KKMGADIVLNHKESLL  207 (346)
T ss_dssp             HHHHHHHHHTTSCCCSSHHHHTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHH-HHHTCSEEECTTSCHH
T ss_pred             HHHHHHHHHHhcCCccccccCCCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCcEEEECCccHH
Confidence            999999998777777      999999996 59999999999999999999999999999888 68999999988752  


Q ss_pred             HHHHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCC-----ceeee---e------------chH
Q 019199          236 EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSP-----ASLNI---G------------GTK  293 (344)
Q Consensus       236 ~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~-----~~~~~---~------------~~~  293 (344)
                      +.+.+. .+++|++||++|+...+..++++++++|+++.++.. ...++..     ..+..   .            ..+
T Consensus       208 ~~~~~~~~~g~Dvv~d~~g~~~~~~~~~~~l~~~G~iv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  287 (346)
T 3fbg_A          208 NQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIATIVAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHE  287 (346)
T ss_dssp             HHHHHHTCCCEEEEEESSCHHHHHHHHHHHEEEEEEEEESSCCSSCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHH
T ss_pred             HHHHHhCCCCccEEEECCCchHHHHHHHHHhccCCEEEEECCCCCCCccccccccceEEEEEEEecccccchhhHHHHHH
Confidence            223333 358999999999887789999999999999998754 2222111     11110   0            125


Q ss_pred             hHHHHHHHHHhCCCccce-EEE---eCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          294 DTQEMLEYCAAHKIYPQI-ETI---PIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       294 ~~~~~~~~~~~g~~~~~~-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                      .++++++++++|++++.+ ++|   +++++++|++.+.+++..||+|+.++++.
T Consensus       288 ~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~~~  341 (346)
T 3fbg_A          288 YLEDITNKVEQNIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNEGH  341 (346)
T ss_dssp             HHHHHHHHHHTTSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC----
T ss_pred             HHHHHHHHHHCCCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCCcc
Confidence            688899999999999876 677   89999999999999999999999998753

>4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A

Probab=100.00  E-value=2.8e-49  Score=375.79  Aligned_cols=313  Identities=19%  Similarity=0.212  Sum_probs=255.6

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhc----------------CCCC-CCCCC-CCcccccceEEEEecCC
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTR----------------NKHG-DSKYP-LVPGHEIVGIVKEVGHN   81 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~----------------g~~~-~~~~p-~~~G~e~~G~V~~~G~~   81 (344)
                      ..+++++++.|+|++|||+|||.++|||++|++...                +... ...+| .++|||++|+|+++|++
T Consensus        48 ~~l~~~e~p~P~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~P~~v~GhE~~G~V~~vG~~  127 (447)
T 4a0s_A           48 KSLRLGEVPMPELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLKQNARQGGWATRHDQPYHVLGSDCSGVVVRTGIG  127 (447)
T ss_dssp             HHCEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHHHHHTTCGGGGGGCCSEEECCSCEEEEEEEECTT
T ss_pred             CCceEEeccCCCCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhhhhcccCccccccCCCCcccccceeEEEEEECCC
Confidence            368899999999999999999999999999975321                1111 12456 69999999999999999


Q ss_pred             CCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccccc
Q 019199           82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPL  161 (344)
Q Consensus        82 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l  161 (344)
                      +++|++||+|++.+.. .|+.|. |..+..+.|.+....  +..    ...|+|+||+.+|++.++++|+++++++||.+
T Consensus       128 V~~~~vGDrV~~~~~~-~~~~~~-~~~~~~~~c~~~~~~--G~~----~~~G~~aey~~v~~~~~~~iP~~ls~~~aA~l  199 (447)
T 4a0s_A          128 VRRWKPGDHVIVHPAH-VDEQEP-ATHGDGMLGTEQRAW--GFE----TNFGGLAEYGVVRASQLLPKPAHLTWEEAAVS  199 (447)
T ss_dssp             CCSCCTTCEEEECSEE-CCTTSG-GGGTCTTCSTTCEET--TTT----SSSCSSBSEEEEEGGGEEECCTTSCHHHHHTS
T ss_pred             CCCCCCCCEEEEecCc-CcCccc-ccccccccccccccc--ccc----CCCCceeeeeecCHHHcEECCCCCCHHHHHHh
Confidence            9999999999987754 566665 666788899875322  111    12599999999999999999999999999999


Q ss_pred             chhhhHhHHHHHhc--cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH---
Q 019199          162 LCAGITVYTPMMRH--KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDL---  235 (344)
Q Consensus       162 ~~~~~ta~~~l~~~--~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~---  235 (344)
                      ++++.|||+++...  ..+++|++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|++.++++.+.   
T Consensus       200 ~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~  278 (447)
T 4a0s_A          200 PLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVAVVSSAQKEAAV-RALGCDLVINRAELGIT  278 (447)
T ss_dssp             HHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCCCEEEHHHHTCC
T ss_pred             HHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEeccccccc
Confidence            99999999999643  66799999999998 9999999999999999999999999999888 78999998876432   


Q ss_pred             ------------------HHHHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCce-------e
Q 019199          236 ------------------EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPAS-------L  287 (344)
Q Consensus       236 ------------------~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~-------~  287 (344)
                                        +.+.+. ++++|++||++|... +..++++++++|+++.+|...  ...++...       +
T Consensus       279 ~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i  357 (447)
T 4a0s_A          279 DDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVT-FGLSVIVARRGGTVVTCGSSSGYLHTFDNRYLWMKLKKI  357 (447)
T ss_dssp             TTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHH-HHHHHHHSCTTCEEEESCCTTCSEEEEEHHHHHHTTCEE
T ss_pred             ccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchH-HHHHHHHHhcCCEEEEEecCCCcccccCHHHHHhCCCEE
Confidence                              222222 368999999999864 999999999999999998762  22222111       1


Q ss_pred             e---eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          288 N---IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       288 ~---~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      .   ....+++.++++++++|++++.+ ++|+++++++||+.+.+++..||+||.+.++
T Consensus       358 ~g~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~GKvvv~~~~~  416 (447)
T 4a0s_A          358 VGSHGANHEEQQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGKVAVLCMAP  416 (447)
T ss_dssp             EECCSCCHHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             EecCCCCHHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHHHHhcCCCceEEEEEeCCC
Confidence            1   23346788999999999999877 8999999999999999999999999998643

>4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli}

Probab=100.00  E-value=3.7e-48  Score=358.13  Aligned_cols=302  Identities=20%  Similarity=0.241  Sum_probs=251.5

Q ss_pred             ccceeeeeec-----CCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCC
Q 019199            7 SKDCLGWAAR-----DPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN   81 (344)
Q Consensus         7 ~~~~~~~~~~-----~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   81 (344)
                      |++++++...     ++++.+++++++.|+|++|||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|++
T Consensus        20 m~~MkA~~~~~~~~~~~~~~l~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~   99 (363)
T 4dvj_A           20 FQSMKAVGYNKPAPITDDASLLDIELPKPAPAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAGIVSAVGPD   99 (363)
T ss_dssp             CCEEEEEEBSSCCCTTSTTSSEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEEEEEEECTT
T ss_pred             hheeEEEEEeccCCCCCCceEEEeecCCCCCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEEEEEEeCCC
Confidence            4455566553     34677889999999999999999999999999999999988766678999999999999999999


Q ss_pred             CCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccccccc
Q 019199           82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPL  161 (344)
Q Consensus        82 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l  161 (344)
                      +++|++||+|+....                                ....|+|+||++++++.++++|+++++++||.+
T Consensus       100 v~~~~vGdrV~~~~~--------------------------------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l  147 (363)
T 4dvj_A          100 VTLFRPGDEVFYAGS--------------------------------IIRPGTNAEFHLVDERIVGRKPKTLDWAEAAAL  147 (363)
T ss_dssp             CCSCCTTCEEEECCC--------------------------------TTSCCSCBSEEEEEGGGCEECCTTSCHHHHHTS
T ss_pred             CCCCCCCCEEEEccC--------------------------------CCCCccceEEEEeCHHHeeECCCCCCHHHHHhh
Confidence            999999999974221                                134689999999999999999999999999999


Q ss_pred             chhhhHhHHHHHhccCCC-----CCCEEEEECC-ChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          162 LCAGITVYTPMMRHKMNQ-----PGKSLGVIGL-GGLGHMAVKFGKA-FGLNVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~-----~g~~vlI~Ga-g~~G~~ai~~a~~-~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      ++++.|||+++.+...++     +|++|||+|+ |++|++++|+||. .|++|+++++++++++.+ +++|+++++++.+
T Consensus       148 ~~~~~ta~~al~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~-~~lGad~vi~~~~  226 (363)
T 4dvj_A          148 PLTSITAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWV-KSLGAHHVIDHSK  226 (363)
T ss_dssp             HHHHHHHHHHHHTTSCTTSCCTTSEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH-HHTTCSEEECTTS
T ss_pred             hhHHHHHHHHHHHhhCcCcCcCCCCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHH-HHcCCCEEEeCCC
Confidence            999999999997777767     8999999995 9999999999998 588999999999999888 6899999999865


Q ss_pred             H--HHHHHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCC-----ceeee---e------------c
Q 019199          235 L--EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSP-----ASLNI---G------------G  291 (344)
Q Consensus       235 ~--~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~-----~~~~~---~------------~  291 (344)
                      .  +.+.+.. +++|++||++|++..+..++++++++|+++.+|.....++..     ..+..   .            .
T Consensus       227 ~~~~~v~~~~~~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~  306 (363)
T 4dvj_A          227 PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFCLIDDPSAFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQ  306 (363)
T ss_dssp             CHHHHHHTTCSCCEEEEEECSCHHHHHHHHHHHSCTTCEEEECSCCSSCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHH
T ss_pred             CHHHHHHHhcCCCceEEEECCCchhhHHHHHHHhcCCCEEEEECCCCccchHHHhhccceEEEEEeeccccccCcchhhH
Confidence            2  2233333 589999999998877999999999999999997552221111     11110   0            0


Q ss_pred             hHhHHHHHHHHHhCCCccce-EEE---eCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          292 TKDTQEMLEYCAAHKIYPQI-ETI---PIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~~~~~~-~~~---~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      .+.++++++++++|++++.+ ++|   +++++++|++.+.+++..||+||++.+
T Consensus       307 ~~~~~~~~~l~~~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~~  360 (363)
T 4dvj_A          307 GRLLNDVSRLVDEGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGFG  360 (363)
T ss_dssp             HHHHHHHHHHHHHTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECSC
T ss_pred             HHHHHHHHHHHHCCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCcc
Confidence            35688999999999999876 556   999999999999999999999998853

>3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti}

Probab=100.00  E-value=1.3e-49  Score=366.39  Aligned_cols=302  Identities=15%  Similarity=0.153  Sum_probs=246.6

Q ss_pred             CCccccccceeeeeec-----CCCCCccceee---------ccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCC
Q 019199            1 MTSETASKDCLGWAAR-----DPSGVLSPYSF---------NRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPL   65 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~-----~~~~~~~~~~~---------~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~   65 (344)
                      |++|+.+.+++++.+.     ++++.+++++.         +.|+|++|||+|||.++|||++|++.+.|..+ ...+|.
T Consensus         2 Ms~m~~p~~mka~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~   81 (349)
T 3pi7_A            2 MSPMTIPSEMKALLLVGDGYTKTPSGSALEAMEPYLEQGRIAVPAPGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKGR   81 (349)
T ss_dssp             ---CCCCSEEEEEEECSCBSCSSCCCSCCCCSTTTEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTTS
T ss_pred             CCCCCCchhheEEEEEccccCCCcccceEEEeecccccccCCCCCCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCCC
Confidence            8888877777777776     46778899888         99999999999999999999999999998765 346899


Q ss_pred             CcccccceEEEEecCCC-CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc
Q 019199           66 VPGHEIVGIVKEVGHNV-SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER  144 (344)
Q Consensus        66 ~~G~e~~G~V~~~G~~~-~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  144 (344)
                      ++|||++|+|+++|+++ ++|++||+|+...                                +....|+|+||+.++++
T Consensus        82 v~G~E~~G~V~~vG~~v~~~~~vGdrV~~~~--------------------------------g~~~~G~~aey~~v~~~  129 (349)
T 3pi7_A           82 PAGFEGVGTIVAGGDEPYAKSLVGKRVAFAT--------------------------------GLSNWGSWAEYAVAEAA  129 (349)
T ss_dssp             BCCSEEEEEEEEECSSHHHHHHTTCEEEEEC--------------------------------TTSSCCSSBSEEEEEGG
T ss_pred             CccceEEEEEEEECCCccCCCCCCCEEEEec--------------------------------cCCCCccceeeEeechH
Confidence            99999999999999999 9999999998643                                12356999999999999


Q ss_pred             eEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCC-CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 019199          145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPG-KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS  222 (344)
Q Consensus       145 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~  222 (344)
                      .++++|+++++++||++++.+.|||+++....  ++| ++|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +
T Consensus       130 ~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~-~  206 (349)
T 3pi7_A          130 ACIPLLDTVRDEDGAAMIVNPLTAIAMFDIVK--QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALL-K  206 (349)
T ss_dssp             GEEECCTTCCC--GGGSSHHHHHHHHHHHHHH--HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHH-H
T ss_pred             HeEECCCCCCHHHHhhccccHHHHHHHHHHHh--hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-H
Confidence            99999999999999999999999997766555  555 78888855 9999999999999999999999999999888 6


Q ss_pred             hCCCcEEEeCCCHHHHH---Hhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCC-ceee------
Q 019199          223 LLGADKFVVSSDLEQMK---ALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSP-ASLN------  288 (344)
Q Consensus       223 ~~g~~~~v~~~~~~~~~---~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~-~~~~------  288 (344)
                      ++|+++++++++.+..+   +.+  +++|++||++|+.. +..++++++++|+++.+|..  ....++. ..+.      
T Consensus       207 ~~Ga~~~~~~~~~~~~~~v~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i  285 (349)
T 3pi7_A          207 DIGAAHVLNEKAPDFEATLREVMKAEQPRIFLDAVTGPL-ASAIFNAMPKRARWIIYGRLDPDATVIREPGQLIFQHKHI  285 (349)
T ss_dssp             HHTCSEEEETTSTTHHHHHHHHHHHHCCCEEEESSCHHH-HHHHHHHSCTTCEEEECCCSCCSCCCCSCTHHHHHSCCEE
T ss_pred             HcCCCEEEECCcHHHHHHHHHHhcCCCCcEEEECCCChh-HHHHHhhhcCCCEEEEEeccCCCCCCCCchhhhhccccEE
Confidence            89999999987754433   332  48999999999887 79999999999999999965  2333333 2111      


Q ss_pred             ee-------------chHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          289 IG-------------GTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       289 ~~-------------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      .+             ..+.++++++++++|++++.+ ++|+++++++|++ +.+++..||+||++
T Consensus       286 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~-~~~~~~~gKvvl~p  349 (349)
T 3pi7_A          286 EGFWLSEWMRQFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIAWVP-AELTKPNGKVFIRP  349 (349)
T ss_dssp             EECCHHHHHHHTHHHHHHHHHHC-CTTTTSSCCC-CCEEEEHHHHHHHHH-HHHTSSSSCEEEEC
T ss_pred             EEEEehhhhhhCcHHHHHHHHHHHHHHHcCCcccccceEEcHHHHHHHHH-HHhCCCCceEEEeC
Confidence            11             135678888999999998876 8999999999999 45555679999874

>3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A*

Probab=100.00  E-value=6.5e-48  Score=357.64  Aligned_cols=307  Identities=14%  Similarity=0.114  Sum_probs=246.1

Q ss_pred             cccccceeeeeecCCCCCccce-eeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCC
Q 019199            4 ETASKDCLGWAARDPSGVLSPY-SFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      |+.+.+++++++. .++.++++ +++.|+|++|||+|||.++|||++|++.+.+.   ..+|.++|||++|+|+++|+++
T Consensus         6 m~~p~~mkA~v~~-~~~~l~~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G~V~~vG~~v   81 (371)
T 3gqv_A            6 FIPPPQQTALTVN-DHDEVTVWNAAPCPMLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAGTVVAVGSDV   81 (371)
T ss_dssp             CCCCSCEEEEEEC-TTSCEEEEEEECCCCCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEEEEEEECTTC
T ss_pred             CCCchhceeEEEc-CCCceEEeccCCCCCCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEEEEEEeCCCC
Confidence            5666667777775 45789998 99999999999999999999999999988662   3468999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                      ++|++||+|+.        .|..|..+.                   ...|+|+||+.++++.++++|+++++++||.++
T Consensus        82 ~~~~~GdrV~~--------~~~~~~~~~-------------------~~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~  134 (371)
T 3gqv_A           82 THIQVGDRVYG--------AQNEMCPRT-------------------PDQGAFSQYTVTRGRVWAKIPKGLSFEQAAALP  134 (371)
T ss_dssp             CSCCTTCEEEE--------ECCTTCTTC-------------------TTCCSSBSEEECCTTCEEECCTTCCHHHHHTSH
T ss_pred             CCCCCCCEEEE--------eccCCCCCC-------------------CCCCcCcCeEEEchhheEECCCCCCHHHHhhhh
Confidence            99999999953        233443321                   346999999999999999999999999999999


Q ss_pred             hhhhHhHHHHHhc-cCC-----------CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE
Q 019199          163 CAGITVYTPMMRH-KMN-----------QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF  229 (344)
Q Consensus       163 ~~~~ta~~~l~~~-~~~-----------~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~  229 (344)
                      +++.|||+++.+. .++           ++|++|||+|+ |++|++++|+|+.+|++|+++. ++++++.+ +++|++++
T Consensus       135 ~~~~ta~~~l~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~-~~lGa~~v  212 (371)
T 3gqv_A          135 AGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLA-KSRGAEEV  212 (371)
T ss_dssp             HHHHHHHHHHHHHTCCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHH-HHTTCSEE
T ss_pred             hhHHHHHHHHHhhccCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHH-HHcCCcEE
Confidence            9999999999766 442           89999999998 9999999999999999999886 67888877 79999999


Q ss_pred             EeCCCHHHH---HHhc-CCccEEEECCCCchhHHHHHHhc-ccCCEEEEEcCCCc-------cccCC---ceee------
Q 019199          230 VVSSDLEQM---KALG-KSLDFIIDTASGDHPFDAYMSLL-KVAGVYVLVGFPSK-------VKFSP---ASLN------  288 (344)
Q Consensus       230 v~~~~~~~~---~~~~-~~~dvvid~~g~~~~~~~~~~~l-~~~G~iv~~g~~~~-------~~~~~---~~~~------  288 (344)
                      +++++.+..   .+.+ +++|++||++|++.++..+++++ +++|+++.+|....       .....   ..+.      
T Consensus       213 i~~~~~~~~~~v~~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~  292 (371)
T 3gqv_A          213 FDYRAPNLAQTIRTYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTW  292 (371)
T ss_dssp             EETTSTTHHHHHHHHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSC
T ss_pred             EECCCchHHHHHHHHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccc
Confidence            998876543   3333 56999999999987799999999 59999999985411       11110   0010      


Q ss_pred             ---e---ech-------HhHHHHHHHHHhCCCccce---EEEeCccHHHHHHHHHcCCcce-EEEEEeCCCC
Q 019199          289 ---I---GGT-------KDTQEMLEYCAAHKIYPQI---ETIPIENVNEALERLIKRDVKY-RFVIDIQNSL  343 (344)
Q Consensus       289 ---~---~~~-------~~~~~~~~~~~~g~~~~~~---~~~~~~~~~~a~~~~~~~~~~g-kvvi~~~~~~  343 (344)
                         +   ...       +.++++++++++|++++..   +.|+++++++||+.+.+++..| |+|+.++++.
T Consensus       293 ~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~~~  364 (371)
T 3gqv_A          293 PAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEGPL  364 (371)
T ss_dssp             STTTCBCCCHHHHHHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECCC-
T ss_pred             cccccccccHHHHHHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCCcc
Confidence               0   011       2345888999999998752   5699999999999999999888 7777777653

>1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=4.3e-48  Score=356.12  Aligned_cols=299  Identities=21%  Similarity=0.342  Sum_probs=244.6

Q ss_pred             ccccceeeeeecCCCCCccc-eeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCC
Q 019199            5 TASKDCLGWAARDPSGVLSP-YSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      +.+|++..+..++.++.+++ ++++.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+++
T Consensus        27 ~~~Mka~~~~~~g~~~~l~~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~vG~~v  106 (351)
T 1yb5_A           27 QKLMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNA  106 (351)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cceEEEEEEccCCCcceeEEeeecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEEEEEEECCCC
Confidence            34455554443334556788 78999999999999999999999999999888664 34678999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                      ++|++||+|+..+                                  ...|+|+||+.++++.++++|+++++++||+++
T Consensus       107 ~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~l~~~~aA~l~  152 (351)
T 1yb5_A          107 SAFKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLDFKQGAAIG  152 (351)
T ss_dssp             TTCCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTSCHHHHTTTH
T ss_pred             CCCCCCCEEEEeC----------------------------------CCCCcceeEEEECHHHeEECCCCCCHHHHHhhh
Confidence            9999999997532                                  125899999999999999999999999999999


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH-
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA-  240 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~-  240 (344)
                      +++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++.+ +++|++.+++..+.+..++ 
T Consensus       153 ~~~~ta~~al~~~~~~~~g~~vlV~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~~~d~~~~~~~~~~  231 (351)
T 1yb5_A          153 IPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAHEVFNHREVNYIDKI  231 (351)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSTTHHHHH
T ss_pred             hHHHHHHHHHHHhhCCCCcCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHH-HHcCCCEEEeCCCchHHHHH
Confidence            999999999987777799999999998 9999999999999999999999999998877 7899999998876543332 


Q ss_pred             --hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCceee------ee------chHhH----HHHHH
Q 019199          241 --LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN------IG------GTKDT----QEMLE  300 (344)
Q Consensus       241 --~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~------~~------~~~~~----~~~~~  300 (344)
                        ..  +++|++||++|... +..++++++++|+++.+|......++...+.      .+      ..+++    +.+.+
T Consensus       232 ~~~~~~~~~D~vi~~~G~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~  310 (351)
T 1yb5_A          232 KKYVGEKGIDIIIEMLANVN-LSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQA  310 (351)
T ss_dssp             HHHHCTTCEEEEEESCHHHH-HHHHHHHEEEEEEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHH
T ss_pred             HHHcCCCCcEEEEECCChHH-HHHHHHhccCCCEEEEEecCCCCccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHH
Confidence              22  47999999999864 8999999999999999986532222221111      11      12333    45566


Q ss_pred             HHHhCCCccce-EEEeCccHHHHHHH-HHcCCcceEEEEEe
Q 019199          301 YCAAHKIYPQI-ETIPIENVNEALER-LIKRDVKYRFVIDI  339 (344)
Q Consensus       301 ~~~~g~~~~~~-~~~~~~~~~~a~~~-~~~~~~~gkvvi~~  339 (344)
                      ++.+|++++.+ ++|+++++++|++. +.+++..||+||.+
T Consensus       311 ~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~~gKvvi~~  351 (351)
T 1yb5_A          311 GMEIGWLKPVIGSQYPLEKVAEAHENIIHGSGATGKMILLL  351 (351)
T ss_dssp             HHHHTCCCCCEEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             HHHCCCccCccceEEcHHHHHHHHHHHHHhCCCCeEEEEeC
Confidence            78889998876 89999999999998 55566789999864

>2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A*

Probab=100.00  E-value=3.8e-49  Score=365.43  Aligned_cols=316  Identities=21%  Similarity=0.259  Sum_probs=252.9

Q ss_pred             eeeeecCCCCCccceeeccCCCCC-CcEEEEEeeeecccchhhhhcC--CCCCCCC---CCCcccccceEEEEecCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGS-DDVSITITHCGVCYADVIWTRN--KHGDSKY---PLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~-~evlV~v~~~~i~~~D~~~~~g--~~~~~~~---p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      +++...+..+.+++++++.|+|++ +||+|||.++|||++|++.+.|  ..+...+   |.++|||++|+|++  ++ ++
T Consensus         2 kA~~~~~~g~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G~V~~--~~-~~   78 (366)
T 2cdc_A            2 KAIIVKPPNAGVQVKDVDEKKLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIGVVEE--SY-HG   78 (366)
T ss_dssp             EEEEECTTSCCCEEEECCGGGSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEEEECS--CC-SS
T ss_pred             eEEEEeCCCCceEEEECcCCCCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEEEEEe--CC-CC
Confidence            344443333348889999999999 9999999999999999999988  5443356   89999999999999  67 89


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCc-cCCcceeEEEEecceEEEcCCCCCcccccccch
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTI-TKGGYSSYIVVHERYCYKIANDYPLALAAPLLC  163 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~  163 (344)
                      |++||+|++.+.. +|++|.+|++|.++.|++......     |.. ..|+|+||++++++.++++|++++ ++| +++.
T Consensus        79 ~~~GDrV~~~~~~-~cg~C~~C~~g~~~~C~~~~~~~~-----g~~~~~G~~aey~~v~~~~~~~iP~~l~-~~A-al~~  150 (366)
T 2cdc_A           79 FSQGDLVMPVNRR-GCGICRNCLVGRPDFCETGEFGEA-----GIHKMDGFMREWWYDDPKYLVKIPKSIE-DIG-ILAQ  150 (366)
T ss_dssp             CCTTCEEEECSEE-CCSSSHHHHTTCGGGCSSSCCEEE-----TTBEECCSCBSEEEECGGGEEEECGGGT-TTG-GGHH
T ss_pred             CCCCCEEEEcCCC-CCCCChhhhCcCcccCCCCCcccC-----CccCCCCceeEEEEechHHeEECcCCcc-hhh-hhcC
Confidence            9999999887655 899999999999999997643100     111 458999999999999999999999 776 4788


Q ss_pred             hhhHhHHHHH--h--ccCCC--C-------CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCc
Q 019199          164 AGITVYTPMM--R--HKMNQ--P-------GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGAD  227 (344)
Q Consensus       164 ~~~ta~~~l~--~--~~~~~--~-------g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~  227 (344)
                      ++.|||+++.  .  ...++  +       |++|||+|+|++|++++|+++.+|++|+++++++   ++++.+ +++|++
T Consensus       151 ~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~GaG~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~-~~~ga~  229 (366)
T 2cdc_A          151 PLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGTGPIGVLFTLLFRTYGLEVWMANRREPTEVEQTVI-EETKTN  229 (366)
T ss_dssp             HHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESCHHHHHHHHHHHHHHTCEEEEEESSCCCHHHHHHH-HHHTCE
T ss_pred             cHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCccchHHHHHH-HHhCCc
Confidence            9999999997  3  44557  8       9999999999999999999999999999999998   888777 689999


Q ss_pred             EEEeCCC--HHHHHHhcCCccEEEECCCCchhH-HHHHHhcccCCEEEEEcCC-Cc-cccCCce---ee----------e
Q 019199          228 KFVVSSD--LEQMKALGKSLDFIIDTASGDHPF-DAYMSLLKVAGVYVLVGFP-SK-VKFSPAS---LN----------I  289 (344)
Q Consensus       228 ~~v~~~~--~~~~~~~~~~~dvvid~~g~~~~~-~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~---~~----------~  289 (344)
                      .+ + .+  .+.+.+..+++|++||++|....+ +.++++++++|+++.+|.. .. ..++...   +.          .
T Consensus       230 ~v-~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~  307 (366)
T 2cdc_A          230 YY-N-SSNGYDKLKDSVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSGSVPLDYKTLQEIVHTNKTIIGLVN  307 (366)
T ss_dssp             EE-E-CTTCSHHHHHHHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSCEEEEEHHHHHHHHHTTCEEEECCC
T ss_pred             ee-c-hHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCCccccChhhhHHHHhcCcEEEEecC
Confidence            88 7 54  122222226899999999997668 9999999999999999876 22 3333322   11          2


Q ss_pred             echHhHHHHHHHHHhCC------Cccce-EEEeCccHHHHHHHH-HcCCcceEEEEEeC
Q 019199          290 GGTKDTQEMLEYCAAHK------IYPQI-ETIPIENVNEALERL-IKRDVKYRFVIDIQ  340 (344)
Q Consensus       290 ~~~~~~~~~~~~~~~g~------~~~~~-~~~~~~~~~~a~~~~-~~~~~~gkvvi~~~  340 (344)
                      ...++++++++++++|+      +++.+ ++|+++++++|++.+ .+++..||+||+++
T Consensus       308 ~~~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~~  366 (366)
T 2cdc_A          308 GQKPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILWE  366 (366)
T ss_dssp             CCHHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEECC
T ss_pred             CCHHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEecC
Confidence            23578999999999999      55766 899999999999984 44666899999864

>3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans}

Probab=100.00  E-value=8.3e-48  Score=353.33  Aligned_cols=305  Identities=22%  Similarity=0.250  Sum_probs=244.3

Q ss_pred             CCccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC--CCCCCCCcccccceEEEEe
Q 019199            1 MTSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--DSKYPLVPGHEIVGIVKEV   78 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--~~~~p~~~G~e~~G~V~~~   78 (344)
                      ||.++.+|++  +...+..+.+++++++.|+|++|||+|||.++|||++|++.+.|...  ...+|.++|||++|+|+++
T Consensus         1 Ms~~~~~mka--~~~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~~G~V~~v   78 (343)
T 3gaz_A            1 MSLTTPTMIA--AVVEEANGPFVLRKLARPQPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDLAGTVVAV   78 (343)
T ss_dssp             -----CEEEE--EEECSTTCCEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEEEEEEEEE
T ss_pred             CCCCchhheE--EEEecCCCceEEEeccCCCCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcceEEEEEEE
Confidence            5654445554  44444444599999999999999999999999999999999988643  2568999999999999999


Q ss_pred             cCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc
Q 019199           79 GHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA  158 (344)
Q Consensus        79 G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a  158 (344)
                      |+++++|++||+|+....            +.                  ....|+|+||+.++++.++++|+++++++|
T Consensus        79 G~~v~~~~vGdrV~~~~~------------g~------------------~~~~G~~aey~~v~~~~~~~~P~~~~~~~a  128 (343)
T 3gaz_A           79 GPEVDSFRVGDAVFGLTG------------GV------------------GGLQGTHAQFAAVDARLLASKPAALTMRQA  128 (343)
T ss_dssp             CTTCCSCCTTCEEEEECC------------SS------------------TTCCCSSBSEEEEEGGGEEECCTTSCHHHH
T ss_pred             CCCCCCCCCCCEEEEEeC------------CC------------------CCCCcceeeEEEecHHHeeeCCCCCCHHHH
Confidence            999999999999974221            00                  024689999999999999999999999999


Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH-
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE-  236 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-  236 (344)
                      |.+++++.|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++ .++++++.+ +++|++. ++ .+.+ 
T Consensus       129 a~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~-~~lGa~~-i~-~~~~~  204 (343)
T 3gaz_A          129 SVLPLVFITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYV-RDLGATP-ID-ASREP  204 (343)
T ss_dssp             HTSHHHHHHHHHHHTTTTCCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHH-HHHTSEE-EE-TTSCH
T ss_pred             HHhhhhHHHHHHHHHHhcCCCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHH-HHcCCCE-ec-cCCCH
Confidence            9999999999999977777799999999995 999999999999999999999 788888887 7899998 66 3332 


Q ss_pred             --HHHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCcccc-----CCceee--ee------------chH
Q 019199          237 --QMKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKF-----SPASLN--IG------------GTK  293 (344)
Q Consensus       237 --~~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~-----~~~~~~--~~------------~~~  293 (344)
                        .+.+.+  +++|++||++|+.. +..++++++++|+++.+|......+     ....+.  ..            ..+
T Consensus       205 ~~~~~~~~~~~g~D~vid~~g~~~-~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~  283 (343)
T 3gaz_A          205 EDYAAEHTAGQGFDLVYDTLGGPV-LDASFSAVKRFGHVVSCLGWGTHKLAPLSFKQATYSGVFTLHTLLANEGLAHFGE  283 (343)
T ss_dssp             HHHHHHHHTTSCEEEEEESSCTHH-HHHHHHHEEEEEEEEESCCCSCCCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHH
T ss_pred             HHHHHHHhcCCCceEEEECCCcHH-HHHHHHHHhcCCeEEEEcccCccccchhhhcCcEEEEEEeccchhcccchHHHHH
Confidence              233332  58999999999864 9999999999999999986531111     111111  00            126


Q ss_pred             hHHHHHHHHHhCCCccce--EEEeCccHHHHHHHHHcCCc----ceEEEEEeCCC
Q 019199          294 DTQEMLEYCAAHKIYPQI--ETIPIENVNEALERLIKRDV----KYRFVIDIQNS  342 (344)
Q Consensus       294 ~~~~~~~~~~~g~~~~~~--~~~~~~~~~~a~~~~~~~~~----~gkvvi~~~~~  342 (344)
                      .++++++++++|++++.+  ++|+++++++|++.+.+++.    +||+|++...+
T Consensus       284 ~~~~~~~l~~~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~~~  338 (343)
T 3gaz_A          284 MLREADALVQTGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVEGH  338 (343)
T ss_dssp             HHHHHHHHHHTTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC--
T ss_pred             HHHHHHHHHHCCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEeccc
Confidence            789999999999999875  48999999999999999765    68999998754

>1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A

Probab=100.00  E-value=4.5e-48  Score=357.10  Aligned_cols=300  Identities=21%  Similarity=0.260  Sum_probs=242.0

Q ss_pred             CccccccceeeeeecCCCC---CccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCcccccceEEEE
Q 019199            2 TSETASKDCLGWAARDPSG---VLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKE   77 (344)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~---~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~   77 (344)
                      .+|+.+|+  ++...++..   .+++++.+.|+|+++||+|||.++|||++|++.+.|..+. ..+|.++|||++|+|++
T Consensus        21 ~~m~~~mk--a~~~~~~g~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G~V~~   98 (357)
T 1zsy_A           21 QSMPARVR--ALVYGHHGDPAKVVELKNLELAAVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVAQVVA   98 (357)
T ss_dssp             CCCCCCEE--EEEESSSSCHHHHEEEEEECCCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEEEEEE
T ss_pred             hhCchhhE--EEEEecCCCccceEEEeeccCCCCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEEEEEE
Confidence            34555555  444443333   2778899999999999999999999999999999887653 35789999999999999


Q ss_pred             ecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccc
Q 019199           78 VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL  157 (344)
Q Consensus        78 ~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~  157 (344)
                      +|+++++|++||+|+..+                                  ...|+|+||+.++++.++++|+++++++
T Consensus        99 vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~  144 (357)
T 1zsy_A           99 VGSNVTGLKPGDWVIPAN----------------------------------AGLGTWRTEAVFSEEALIQVPSDIPLQS  144 (357)
T ss_dssp             ECTTCCSCCTTCEEEESS----------------------------------SCSCCSBSEEEEEGGGEEEECSSSCHHH
T ss_pred             eCCCCCCCCCCCEEEEcC----------------------------------CCCccceeEEecCHHHcEECCCCCCHHH
Confidence            999999999999997532                                  1248999999999999999999999999


Q ss_pred             ccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHhCCCcEEEeC
Q 019199          158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS----KKEEALSLLGADKFVVS  232 (344)
Q Consensus       158 aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~----~~~~~~~~~g~~~~v~~  232 (344)
                      ||++++++.|||+++.+...+++|++|||+|+ |++|++++|+||.+|+++++++++++    +++.+ +++|+++++++
T Consensus       145 Aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~-~~lGa~~vi~~  223 (357)
T 1zsy_A          145 AATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRL-KSLGAEHVITE  223 (357)
T ss_dssp             HHHTTSHHHHHHHHHHHSSCCCTTCEEEESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHH-HHTTCSEEEEH
T ss_pred             HhhhcccHHHHHHHHHHHhccCCCCEEEEeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHH-HhcCCcEEEec
Confidence            99999999999999988777899999999998 99999999999999998887775543    34555 78999999986


Q ss_pred             CCH--HHHHHhc---CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee------eec--------
Q 019199          233 SDL--EQMKALG---KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN------IGG--------  291 (344)
Q Consensus       233 ~~~--~~~~~~~---~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~------~~~--------  291 (344)
                      .+.  +.+.+..   +++|++||++|++. ...++++++++|+++.+|..  ....++...+.      .+.        
T Consensus       224 ~~~~~~~~~~~~~~~~~~Dvvid~~g~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~  302 (357)
T 1zsy_A          224 EELRRPEMKNFFKDMPQPRLALNCVGGKS-STELLRQLARGGTMVTYGGMAKQPVVASVSLLIFKDLKLRGFWLSQWKKD  302 (357)
T ss_dssp             HHHHSGGGGGTTSSSCCCSEEEESSCHHH-HHHHHTTSCTTCEEEECCCCTTCCBCCCHHHHHHSCCEEEECCHHHHHHH
T ss_pred             CcchHHHHHHHHhCCCCceEEEECCCcHH-HHHHHHhhCCCCEEEEEecCCCCCCCCCHHHHHhcCceEEEEEcchhccc
Confidence            432  1222332   25999999999876 67799999999999999854  22233221111      111        


Q ss_pred             ------hHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          292 ------TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       292 ------~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                            .+.++++++++.+|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       303 ~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  357 (357)
T 1zsy_A          303 HSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM  357 (357)
T ss_dssp             SCHHHHHHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred             CCHHHHHHHHHHHHHHHHcCCCcCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence                  23578899999999999876 8999999999999999988889999974

>4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens}

Probab=100.00  E-value=6.4e-48  Score=355.01  Aligned_cols=295  Identities=22%  Similarity=0.363  Sum_probs=238.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ||+..+..++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|+++++|+
T Consensus         4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G~V~~vG~~v~~~~   83 (349)
T 4a27_A            4 MRAVVLAGFGGLNKLRLFRKAMPEPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSGIVEALGDSVKGYE   83 (349)
T ss_dssp             EEEEEECSSSSGGGEEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEEEEEEECTTCCSCC
T ss_pred             eEEEEEccCCCcceeEEEecCCCCCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEEEEEEeCCCCCCCC
Confidence            4444444333344688999999999999999999999999999999998765 457899999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+..+                                   ..|+|+||+.++++.++++|+++++++||++++++.
T Consensus        84 ~GdrV~~~~-----------------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  128 (349)
T 4a27_A           84 IGDRVMAFV-----------------------------------NYNAWAEVVCTPVEFVYKIPDDMSFSEAAAFPMNFV  128 (349)
T ss_dssp             TTCEEEEEC-----------------------------------SSCCSBSEEEEEGGGEEECCTTSCHHHHHTSHHHHH
T ss_pred             CCCEEEEec-----------------------------------CCCcceEEEEecHHHeEECCCCCCHHHHHHHHHHHH
Confidence            999997532                                   348999999999999999999999999999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL  241 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~  241 (344)
                      |||+++.+...+++|++|||+|+ |++|++++|+|+.+| ++|++++ ++++.+.+ + +|++++++ .+.+.   +.+.
T Consensus       129 ta~~~l~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~-~-~ga~~~~~-~~~~~~~~~~~~  204 (349)
T 4a27_A          129 TAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAI-K-DSVTHLFD-RNADYVQEVKRI  204 (349)
T ss_dssp             HHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHH-G-GGSSEEEE-TTSCHHHHHHHH
T ss_pred             HHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHH-H-cCCcEEEc-CCccHHHHHHHh
Confidence            99999988888899999999998 999999999999986 5888887 55677666 5 89999998 44332   3333


Q ss_pred             -cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccc---------------cCCceee------ee------
Q 019199          242 -GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVK---------------FSPASLN------IG------  290 (344)
Q Consensus       242 -~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~---------------~~~~~~~------~~------  290 (344)
                       .+++|++||++|++. +..++++++++|+++.+|...   ...               ++...+.      .+      
T Consensus       205 ~~~g~Dvv~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~  283 (349)
T 4a27_A          205 SAEGVDIVLDCLCGDN-TGKGLSLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNL  283 (349)
T ss_dssp             CTTCEEEEEEECC--------CTTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHH
T ss_pred             cCCCceEEEECCCchh-HHHHHHHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehhe
Confidence             368999999999887 699999999999999998641   100               1111000      00      


Q ss_pred             ---------chHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          291 ---------GTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       291 ---------~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                               .++.++++++++++|++++.+ ++|+++++++|++.+.+++..||+||+++++
T Consensus       284 ~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~  345 (349)
T 4a27_A          284 LFKQGRAGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT  345 (349)
T ss_dssp             HHTSCCHHHHHHHHHHHHHHHHTTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred             eccccchHHHHHHHHHHHHHHHCCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence                     156789999999999999877 8999999999999999999999999999875

>2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens}

Probab=100.00  E-value=3.3e-47  Score=353.59  Aligned_cols=305  Identities=22%  Similarity=0.284  Sum_probs=246.8

Q ss_pred             CCccccccceeeeeecCCCCCccc-eeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCC---------------CCCC
Q 019199            1 MTSETASKDCLGWAARDPSGVLSP-YSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHG---------------DSKY   63 (344)
Q Consensus         1 ~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---------------~~~~   63 (344)
                      |..|+.+|++..+..++.+..+++ ++.+.|+| ++|||+|||.++|||++|++.+.|..+               ...+
T Consensus        15 ~~~~~~~mka~~~~~~g~~~~l~~~~~~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~~~   94 (375)
T 2vn8_A           15 TENLYFQSMAWVIDKYGKNEVLRFTQNMMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGEEF   94 (375)
T ss_dssp             ---CCCCEEEEEBSSCCSGGGCEEEEEECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTTTC
T ss_pred             ccccCccceeEEeccCCCccceEEeccccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccccC
Confidence            344444555444443333456778 88999985 999999999999999999999887521               1237


Q ss_pred             CCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec
Q 019199           64 PLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE  143 (344)
Q Consensus        64 p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~  143 (344)
                      |.++|||++|+|+++|+++++|++||+|+..+..                                ...|+|+||+.+++
T Consensus        95 P~v~G~E~~G~V~~vG~~V~~~~vGDrV~~~~~~--------------------------------~~~G~~aey~~v~~  142 (375)
T 2vn8_A           95 PLTLGRDVSGVVMECGLDVKYFKPGDEVWAAVPP--------------------------------WKQGTLSEFVVVSG  142 (375)
T ss_dssp             SBCCCCEEEEEEEEECTTCCSCCTTCEEEEECCT--------------------------------TSCCSSBSEEEEEG
T ss_pred             CcccceeeeEEEEEeCCCCCCCCCCCEEEEecCC--------------------------------CCCccceeEEEEcH
Confidence            8999999999999999999999999999764310                                23589999999999


Q ss_pred             ceEEEcCCCCCcccccccchhhhHhHHHHHhccC----CCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHH
Q 019199          144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKM----NQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKE  218 (344)
Q Consensus       144 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~----~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~  218 (344)
                      +.++++|+++++++||++++++.|||+++.+...    +++|++|||+|+ |++|++++|+|+..|++|++++ ++++++
T Consensus       143 ~~~~~iP~~ls~~~Aa~l~~~~~tA~~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~  221 (375)
T 2vn8_A          143 NEVSHKPKSLTHTQAASLPYVALTAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASE  221 (375)
T ss_dssp             GGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHH
T ss_pred             HHeeeCCCCCCHHHHhhhHHHHHHHHHHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHH
Confidence            9999999999999999999999999999976666    799999999995 9999999999999999999988 567887


Q ss_pred             HHHHhCCCcEEEeCCCHHHHHHh--cCCccEEEECCCCc-hhHHHHHHhcccCCEEEEEcCCCc--cc-----c------
Q 019199          219 EALSLLGADKFVVSSDLEQMKAL--GKSLDFIIDTASGD-HPFDAYMSLLKVAGVYVLVGFPSK--VK-----F------  282 (344)
Q Consensus       219 ~~~~~~g~~~~v~~~~~~~~~~~--~~~~dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~~~~--~~-----~------  282 (344)
                      .+ +++|++.++++++.+..+++  .+++|++||++|+. .++..++++++++|+++.+|....  ..     .      
T Consensus       222 ~~-~~lGa~~v~~~~~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~  300 (375)
T 2vn8_A          222 LV-RKLGADDVIDYKSGSVEEQLKSLKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTG  300 (375)
T ss_dssp             HH-HHTTCSEEEETTSSCHHHHHHTSCCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHH
T ss_pred             HH-HHcCCCEEEECCchHHHHHHhhcCCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheee
Confidence            77 79999999998765544433  25899999999988 456889999999999999986511  00     0      


Q ss_pred             ------------CCceee----eechHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          283 ------------SPASLN----IGGTKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       283 ------------~~~~~~----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                                  ....+.    ....+.++++++++++|++++.+ ++|+++++++|++.+.+++..||+|+++
T Consensus       301 ~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  374 (375)
T 2vn8_A          301 VTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV  374 (375)
T ss_dssp             HHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred             hhhccccccccccCcceEEEEeCCCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence                        111111    11246789999999999999876 8999999999999999998889999976

>1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP}

Probab=100.00  E-value=1.4e-47  Score=350.68  Aligned_cols=298  Identities=20%  Similarity=0.260  Sum_probs=245.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-CC--CCCCCCcccccceEEEEecCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-GD--SKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~--~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      ||+..+..++.++.+++++.+.|+|++|||+|||.++|||++|++.+.|.. +.  ..+|.++|||++|+|+++|+++++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (333)
T 1wly_A            2 VMAAVIHKKGGPDNFVWEEVKVGSPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAAVVEEVGPGVTD   81 (333)
T ss_dssp             CEEEEESSCSSGGGEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEEEEEEECTTCCS
T ss_pred             cEEEEEcccCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEEEEEEECCCCCC
Confidence            555555544445568889999999999999999999999999999998865 22  457899999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCccc--ccccc
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLAL--AAPLL  162 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~--aa~l~  162 (344)
                      |++||+|+..+.                                  ..|+|+||+.+|++.++++|+++++++  ||+++
T Consensus        82 ~~~GdrV~~~~~----------------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~~~aa~l~  127 (333)
T 1wly_A           82 FTVGERVCTCLP----------------------------------PLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM  127 (333)
T ss_dssp             CCTTCEEEECSS----------------------------------SCCCSBSEEEEEGGGCEECCTTCCCCHHHHHHHH
T ss_pred             CCCCCEEEEecC----------------------------------CCCcceeEEEecHHHcEeCCCCCChHHhCccchh
Confidence            999999964210                                  148999999999999999999999999  99999


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---  238 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---  238 (344)
                      +++.|||+++.+...+++|++|||+|+ |++|++++++++..|++|+++++++++++.+ +++|++.+++..+.+..   
T Consensus       128 ~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~i  206 (333)
T 1wly_A          128 LKGMTAQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETA-RKLGCHHTINYSTQDFAEVV  206 (333)
T ss_dssp             HHHHHHHHHHHTTSCCCTTCEEEETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHH
T ss_pred             hhHHHHHHHHHHhhCCCCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCCEEEECCCHHHHHHH
Confidence            999999999987777799999999997 9999999999999999999999999888888 57899999987764432   


Q ss_pred             HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCc------e--ee-ee-------c----hHh
Q 019199          239 KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPA------S--LN-IG-------G----TKD  294 (344)
Q Consensus       239 ~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~------~--~~-~~-------~----~~~  294 (344)
                      .+.  .+++|++||++|+. .++.++++++++|+++.+|...  ...++..      .  .. .+       .    .+.
T Consensus       207 ~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~  285 (333)
T 1wly_A          207 REITGGKGVDVVYDSIGKD-TLQKSLDCLRPRGMCAAYGHASGVADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEG  285 (333)
T ss_dssp             HHHHTTCCEEEEEECSCTT-THHHHHHTEEEEEEEEECCCTTCCCCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHH
T ss_pred             HHHhCCCCCeEEEECCcHH-HHHHHHHhhccCCEEEEEecCCCCcCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHH
Confidence            222  25799999999984 5999999999999999998652  1122211      1  11 01       1    236


Q ss_pred             HHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          295 TQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       295 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      ++++++++++|++++.+ ++|+++++++|++.+.+++..||+|+.+++
T Consensus       286 ~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~  333 (333)
T 1wly_A          286 SKCLFDAVKAGVLHSSVAKTFPLREAAAAHKYMGGRQTIGSIVLLPQA  333 (333)
T ss_dssp             HHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred             HHHHHHHHHCCCcCCCcceEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence            88999999999999876 899999999999999998888999998753

>2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A*

Probab=100.00  E-value=2.7e-47  Score=351.36  Aligned_cols=297  Identities=19%  Similarity=0.255  Sum_probs=244.1

Q ss_pred             ccceeeeeecCC--CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCcccccceEEEEecCCC-
Q 019199            7 SKDCLGWAARDP--SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNV-   82 (344)
Q Consensus         7 ~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~~-   82 (344)
                      +.+++++...+.  ++.+++++.+.|+|+++||+|||.++|||++|++.+.|.++. ..+|.++|||++|+|+++|+++ 
T Consensus        20 ~~~Mka~~~~~~g~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G~V~~vG~~v~   99 (354)
T 2j8z_A           20 FQSMLAVHFDKPGGPENLYVKEVAKPSPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASGHVAELGPGCQ   99 (354)
T ss_dssp             -CEEEEEEESSCSSGGGEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEEEEEEECSCC-
T ss_pred             hhheeEEEEccCCCccceEEeecCCCCCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEEEEEEECCCcC
Confidence            344455555432  346888999999999999999999999999999998887653 3478999999999999999999 


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                      ++|++||+|+...                                   ..|+|+||++++++.++++|+++++++||+++
T Consensus       100 ~~~~vGdrV~~~~-----------------------------------~~G~~aey~~v~~~~~~~iP~~ls~~~aa~l~  144 (354)
T 2j8z_A          100 GHWKIGDTAMALL-----------------------------------PGGGQAQYVTVPEGLLMPIPEGLTLTQAAAIP  144 (354)
T ss_dssp             -CCCTTCEEEEEC-----------------------------------SSCCSBSEEEEEGGGEEECCTTCCHHHHTTSH
T ss_pred             CCCCCCCEEEEec-----------------------------------CCCcceeEEEeCHHHcEECCCCCCHHHHHhcc
Confidence            9999999997532                                   24899999999999999999999999999999


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH---
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM---  238 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~---  238 (344)
                      +++.|||+++.+...+++|++|||+|+ |++|++++++++..|++|+++++++++++.+ +++|++.+++..+.+..   
T Consensus       145 ~~~~tA~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~  223 (354)
T 2j8z_A          145 EAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMA-EKLGAAAGFNYKKEDFSEAT  223 (354)
T ss_dssp             HHHHHHHHHHTTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHHTCSEEEETTTSCHHHHH
T ss_pred             chHHHHHHHHHHhcCCCCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCcEEEecCChHHHHHH
Confidence            999999999977777799999999996 9999999999999999999999999998888 78999999988765433   


Q ss_pred             HHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCC-ceee------ee----ch-H---------
Q 019199          239 KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSP-ASLN------IG----GT-K---------  293 (344)
Q Consensus       239 ~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~-~~~~------~~----~~-~---------  293 (344)
                      .+..  +++|++||++|++. +..++++++++|+++.+|...  ...++. ..+.      .+    .. .         
T Consensus       224 ~~~~~~~~~d~vi~~~G~~~-~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~  302 (354)
T 2j8z_A          224 LKFTKGAGVNLILDCIGGSY-WEKNVNCLALDGRWVLYGLMGGGDINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNA  302 (354)
T ss_dssp             HHHTTTSCEEEEEESSCGGG-HHHHHHHEEEEEEEEECCCTTCSCCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHH
T ss_pred             HHHhcCCCceEEEECCCchH-HHHHHHhccCCCEEEEEeccCCCccCCChhHHHHhCCCEEEEEEcccccccccHHHHHH
Confidence            3332  47999999999874 999999999999999999762  223332 1111      11    11 1         


Q ss_pred             hHHHHHHHHHhC---CCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          294 DTQEMLEYCAAH---KIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       294 ~~~~~~~~~~~g---~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      .++++++++++|   ++++.+ ++|+++++++|++.+.+++..||+|++++
T Consensus       303 ~~~~~~~l~~~g~~~~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  353 (354)
T 2j8z_A          303 FTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP  353 (354)
T ss_dssp             HHHHTGGGGTC---CCCCCCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred             HHHHHHHHHHcCCCccccCccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence            124578889999   888876 89999999999999999888899999875

>1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=5.1e-47  Score=346.08  Aligned_cols=296  Identities=19%  Similarity=0.265  Sum_probs=246.3

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      ||+..+..++.++.+++++.+.|+|+++||+|||.++|||++|++.+.|..+...+|.++|||++|+|+++|+++++|++
T Consensus         2 Mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G~V~~vG~~v~~~~~   81 (327)
T 1qor_A            2 ATRIEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKA   81 (327)
T ss_dssp             CEEEEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCT
T ss_pred             cEEEEEcCCCChhheEEeccCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEEEEEEECCCCCCCCC
Confidence            55554444334556888999999999999999999999999999999887654568999999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|. .+     +                            ...|+|+||+.+|++.++++|+++++++||++++++.|
T Consensus        82 GdrV~-~~-----g----------------------------~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~~~t  127 (327)
T 1qor_A           82 GDRVV-YA-----Q----------------------------SALGAYSSVHNIIADKAAILPAAISFEQAAASFLKGLT  127 (327)
T ss_dssp             TCEEE-ES-----C----------------------------CSSCCSBSEEEEEGGGEEECCTTSCHHHHHHHHHHHHH
T ss_pred             CCEEE-EC-----C----------------------------CCCceeeeEEEecHHHcEECCCCCCHHHHHHhhhHHHH
Confidence            99994 21     0                            12489999999999999999999999999999999999


Q ss_pred             hHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc-
Q 019199          168 VYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG-  242 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~-  242 (344)
                      ||+++.+...+++|++|||+|+ |++|++++++++..|++|+++++++++++.+ +++|++.+++..+.+..+   +.. 
T Consensus       128 a~~al~~~~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~~~~~~~~~~~~~~~~~  206 (327)
T 1qor_A          128 VYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKAGAWQVINYREEDLVERLKEITG  206 (327)
T ss_dssp             HHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEETTTSCHHHHHHHHTT
T ss_pred             HHHHHHHhhCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HHcCCCEEEECCCccHHHHHHHHhC
Confidence            9999987777799999999996 9999999999999999999999999888888 578999999876654332   322 


Q ss_pred             -CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C-ccccCCc------eeeee-------------chHhHHHHHH
Q 019199          243 -KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-KVKFSPA------SLNIG-------------GTKDTQEMLE  300 (344)
Q Consensus       243 -~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~-~~~~~~~------~~~~~-------------~~~~~~~~~~  300 (344)
                       +++|++||++| ...++.++++++++|+++.+|.. . ...++..      .+...             ..+.++++++
T Consensus       207 ~~~~D~vi~~~g-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  285 (327)
T 1qor_A          207 GKKVRVVYDSVG-RDTWERSLDCLQRRGLMVSFGNSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFS  285 (327)
T ss_dssp             TCCEEEEEECSC-GGGHHHHHHTEEEEEEEEECCCTTCCCCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHH
T ss_pred             CCCceEEEECCc-hHHHHHHHHHhcCCCEEEEEecCCCCCCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHH
Confidence             47999999999 55699999999999999999875 2 1222221      11110             1345789999


Q ss_pred             HHHhCCCccce---EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          301 YCAAHKIYPQI---ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       301 ~~~~g~~~~~~---~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ++++|++++.+   ++|+++++++|++.+.+++..||+|+++
T Consensus       286 l~~~g~l~~~i~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  327 (327)
T 1qor_A          286 LIASGVIKVDVAEQQKYPLKDAQRAHEILESRATQGSSLLIP  327 (327)
T ss_dssp             HHHTTSSCCCCCGGGEEEGGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred             HHHCCCcccccccCcEEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence            99999998864   6999999999999999988889999864

>3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A*

Probab=100.00  E-value=3e-48  Score=353.87  Aligned_cols=299  Identities=18%  Similarity=0.266  Sum_probs=246.6

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ||+..+..++.+..+++++.+.|+|++|||+|||.++|+|++|++.+.|..+ ...+|.++|||++|+|+++|  +++|+
T Consensus         1 MkA~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~G--v~~~~   78 (324)
T 3nx4_A            1 MQALILEQQDGKTLASVQHLEESQLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAGTVHASE--DPRFH   78 (324)
T ss_dssp             CEEEEEEESSSSEEEEEEECCGGGSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEEEEEEES--STTCC
T ss_pred             CceEEEecCCCCceeeEeecCCCCCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEEEEEEeC--CCCCC
Confidence            4555555544455688999999999999999999999999999999998765 35789999999999999998  57899


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|++.++.                             .|....|+|+||+.+|++.++++|+++++++||++++.+.
T Consensus        79 vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~  129 (324)
T 3nx4_A           79 AGQEVLLTGWG-----------------------------VGENHWGGLAERARVKGDWLVALPAGLSSRNAMIIGTAGF  129 (324)
T ss_dssp             TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEcccc-----------------------------cCCCCCCceeeEEecCHHHcEECCCCCCHHHHHHhhhHHH
Confidence            99999864310                             0223569999999999999999999999999999999999


Q ss_pred             HhHHHHHhcc--CCCC--CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh
Q 019199          167 TVYTPMMRHK--MNQP--GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL  241 (344)
Q Consensus       167 ta~~~l~~~~--~~~~--g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~  241 (344)
                      |||.++....  .+++  |+ |||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+.++++
T Consensus       130 ta~~al~~~~~~~~~~~~g~-VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~  207 (324)
T 3nx4_A          130 TAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYL-KSLGANRILSRDEFAESRPL  207 (324)
T ss_dssp             HHHHHHHHHHHTTCCGGGCC-EEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTCSEEEEGGGSSCCCSS
T ss_pred             HHHHHHHHhhhcccCCCCCe-EEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-HhcCCCEEEecCCHHHHHhh
Confidence            9998875432  2355  45 999998 9999999999999999999999999999988 68999999998764433333


Q ss_pred             c-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee------ee------c----hHhHHHHHHHH
Q 019199          242 G-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN------IG------G----TKDTQEMLEYC  302 (344)
Q Consensus       242 ~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~------~~------~----~~~~~~~~~~~  302 (344)
                      . +++|++||++|++ .+..++++++++|+++.+|...  ...++...+.      .+      .    .+.++++++++
T Consensus       208 ~~~~~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~  286 (324)
T 3nx4_A          208 EKQLWAGAIDTVGDK-VLAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDL  286 (324)
T ss_dssp             CCCCEEEEEESSCHH-HHHHHHHTEEEEEEEEECCCTTCSEEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHS
T ss_pred             cCCCccEEEECCCcH-HHHHHHHHHhcCCEEEEEecCCCCCCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHH
Confidence            2 5899999999987 5999999999999999999762  2233222211      11      1    25678899999


Q ss_pred             HhCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          303 AAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       303 ~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      ++|++++..++|+++++++||+.+.+++..||+|++++
T Consensus       287 ~~g~l~~~~~~~~l~~~~~A~~~~~~~~~~gkvvv~~~  324 (324)
T 3nx4_A          287 PESFYAQAATEITLADAPKFADAIINNQVQGRTLVKIK  324 (324)
T ss_dssp             CHHHHHHHEEEEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred             HcCCCCCCceeEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence            99999877789999999999999999999999999874

>1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A

Probab=100.00  E-value=3.5e-46  Score=345.50  Aligned_cols=296  Identities=17%  Similarity=0.169  Sum_probs=241.3

Q ss_pred             cceeeeeecCCCC---CccceeeccCCCC--CCcEEEEEeeeecccchhhhhcCCCCC-CCCC---------CCcccccc
Q 019199            8 KDCLGWAARDPSG---VLSPYSFNRRAVG--SDDVSITITHCGVCYADVIWTRNKHGD-SKYP---------LVPGHEIV   72 (344)
Q Consensus         8 ~~~~~~~~~~~~~---~~~~~~~~~p~~~--~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p---------~~~G~e~~   72 (344)
                      ++++++...+..+   .+++++.+.|+|.  +|||+|||.++|||++|++.+.|..+. ..+|         .++|||++
T Consensus         2 ~~mka~~~~~~g~~~~~l~~~~~~~P~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~G~E~~   81 (364)
T 1gu7_A            2 ITAQAVLYTQHGEPKDVLFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGL   81 (364)
T ss_dssp             EEEEEEEESSCSCHHHHCEEEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCE
T ss_pred             ceEEEEEeccCCCchheeEEeeccCCCCCCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCcccccCceeE
Confidence            3345666544433   3788899998887  999999999999999999999886642 3456         89999999


Q ss_pred             eEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCC-
Q 019199           73 GIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN-  151 (344)
Q Consensus        73 G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~-  151 (344)
                      |+|+++|+++++|++||+|+..+                                  ...|+|+||++++++.++++|+ 
T Consensus        82 G~V~~vG~~v~~~~vGdrV~~~~----------------------------------~~~G~~aey~~v~~~~~~~~P~~  127 (364)
T 1gu7_A           82 FEVIKVGSNVSSLEAGDWVIPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNP  127 (364)
T ss_dssp             EEEEEECTTCCSCCTTCEEEESS----------------------------------SCCCCSBSEEEEEGGGEEEECCH
T ss_pred             EEEEEeCCCCCcCCCCCEEEecC----------------------------------CCCCcchheEecCHHHeEEcCCc
Confidence            99999999999999999997532                                  1348999999999999999998 


Q ss_pred             ----------CCCcccccccchhhhHhHHHHHhccCCCCC-CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh---
Q 019199          152 ----------DYPLALAAPLLCAGITVYTPMMRHKMNQPG-KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK---  216 (344)
Q Consensus       152 ----------~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g-~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~---  216 (344)
                                ++++++||++++++.|||+++.+...+++| ++|||+|+ |++|++++|+|+.+|++|++++++.++   
T Consensus       128 ~~~~~~~~~~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~  207 (364)
T 1gu7_A          128 AQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDE  207 (364)
T ss_dssp             HHHHHTTCSCCCCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHH
T ss_pred             cccccccccCCCCHHHHhhccccHHHHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHH
Confidence                      899999999999999999999887777999 99999998 999999999999999999888866554   


Q ss_pred             -HHHHHHhCCCcEEEeCCC---HH---HHHHh----cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccC
Q 019199          217 -KEEALSLLGADKFVVSSD---LE---QMKAL----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFS  283 (344)
Q Consensus       217 -~~~~~~~~g~~~~v~~~~---~~---~~~~~----~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~  283 (344)
                       .+.+ +++|+++++++++   .+   .+.+.    .+++|++||++|+.. ...++++++++|+++.+|...  ...++
T Consensus       208 ~~~~~-~~lGa~~vi~~~~~~~~~~~~~i~~~t~~~~~g~Dvvid~~G~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~  285 (364)
T 1gu7_A          208 VVASL-KELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIP  285 (364)
T ss_dssp             HHHHH-HHHTCSEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEEC
T ss_pred             HHHHH-HhcCCeEEEecCccchHHHHHHHHHHhhccCCCceEEEECCCchh-HHHHHHHhccCCEEEEecCCCCCCcccC
Confidence             4555 7899999998764   22   33333    358999999999887 558899999999999998752  23333


Q ss_pred             Cceee------ee---c----------hHhHHHHHHHHHhCCCccce-EEEeCc---cHHHHHHHHHcCCcceEEEEEe
Q 019199          284 PASLN------IG---G----------TKDTQEMLEYCAAHKIYPQI-ETIPIE---NVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       284 ~~~~~------~~---~----------~~~~~~~~~~~~~g~~~~~~-~~~~~~---~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      ...+.      .+   .          .+.++++++++++|++++.. .+|+++   ++++|++.+.+++..||+||++
T Consensus       286 ~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  364 (364)
T 1gu7_A          286 TSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY  364 (364)
T ss_dssp             HHHHHHSCCEEEECCHHHHHTTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred             HHHHhhcCcEEEEEchhHhcccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence            22111      11   1          25689999999999998754 777775   9999999999998889999975

>4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A*

Probab=100.00  E-value=1e-44  Score=332.09  Aligned_cols=280  Identities=18%  Similarity=0.191  Sum_probs=236.7

Q ss_pred             CCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccc----cceEEEEecCCCCCCCCCCEEEE
Q 019199           18 PSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHE----IVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        18 ~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e----~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      +++.+++++.+.|+|++|||+|||.+++||++|+..+.+... ..+|.++|||    ++|+|++.  ++++|++||||+.
T Consensus        22 ~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~d~~~~~~~~~-~~~p~~~G~e~g~~~~G~V~~~--~v~~~~vGdrV~~   98 (336)
T 4b7c_A           22 GRDTFSFVETPLGEPAEGQILVKNEYLSLDPAMRGWMNDARS-YIPPVGIGEVMRALGVGKVLVS--KHPGFQAGDYVNG   98 (336)
T ss_dssp             CTTSEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHHSCSCC-SSCCCCTTSBCCCEEEEEEEEE--CSTTCCTTCEEEE
T ss_pred             CCCceEEEeccCCCCCCCEEEEEEEEEEeCHHHHhhhhcccc-cCCCCCCCcccCCceEEEEEec--CCCCCCCCCEEec
Confidence            467899999999999999999999999999999888766432 3457778888    79999994  5889999999963


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc--cccchhhhHhHHH
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA--APLLCAGITVYTP  171 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a--a~l~~~~~ta~~~  171 (344)
                                                            .|+|+||+.+|++.++++|+++++.++  +++++++.|||++
T Consensus        99 --------------------------------------~G~~aey~~v~~~~~~~~P~~~~~~~~a~a~l~~~~~tA~~a  140 (336)
T 4b7c_A           99 --------------------------------------ALGVQDYFIGEPKGFYKVDPSRAPLPRYLSALGMTGMTAYFA  140 (336)
T ss_dssp             --------------------------------------ECCSBSEEEECCTTCEEECTTTSCGGGGGTTTSHHHHHHHHH
T ss_pred             --------------------------------------cCCceEEEEechHHeEEcCCCCCchHHHhhhcccHHHHHHHH
Confidence                                                  378999999999999999999988776  7899999999999


Q ss_pred             HHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hh-cCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---AL-GKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~-~~~~d  246 (344)
                      +.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++.+.+++|++.+++..+.+..+   +. .+++|
T Consensus       141 l~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~d  220 (336)
T 4b7c_A          141 LLDVGQPKNGETVVISGAAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVEELGFDGAIDYKNEDLAAGLKRECPKGID  220 (336)
T ss_dssp             HHHTTCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTTCCSEEEETTTSCHHHHHHHHCTTCEE
T ss_pred             HHHhcCCCCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCEEEECCCHHHHHHHHHhcCCCce
Confidence            977777799999999998 99999999999999999999999999998886789999999987654333   33 36799


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCC-----c---cccCCceee----------eec-----hHhHHHHHHHHH
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-----K---VKFSPASLN----------IGG-----TKDTQEMLEYCA  303 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-----~---~~~~~~~~~----------~~~-----~~~~~~~~~~~~  303 (344)
                      ++||++|+. .+..++++++++|+++.+|...     .   ..++...+.          ...     .+.+++++++++
T Consensus       221 ~vi~~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~  299 (336)
T 4b7c_A          221 VFFDNVGGE-ILDTVLTRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLA  299 (336)
T ss_dssp             EEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHH
T ss_pred             EEEECCCcc-hHHHHHHHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHH
Confidence            999999985 4999999999999999998652     1   122221111          111     267899999999


Q ss_pred             hCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          304 AHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       304 ~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +|++++.+ .+|+++++++||+.+.+++..||+||++
T Consensus       300 ~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  336 (336)
T 4b7c_A          300 EGKLQSREDIVEGLETFPETLLKLFSGENFGKLVLKV  336 (336)
T ss_dssp             TTSSCCCEEEEECGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred             CCCcccceeeecCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            99999876 6799999999999999999899999975

>2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A*

Probab=100.00  E-value=8.4e-45  Score=335.65  Aligned_cols=292  Identities=21%  Similarity=0.286  Sum_probs=241.0

Q ss_pred             eeeeeecCCC----CCccc-eeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCC
Q 019199           10 CLGWAARDPS----GVLSP-YSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus        10 ~~~~~~~~~~----~~~~~-~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      ++++...+..    +.+++ ++.+.|+|++|||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|+++|++++
T Consensus        24 MkA~~~~~~g~~~~~~l~~~~~~p~P~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G~V~~vG~~V~  103 (362)
T 2c0c_A           24 MQKLVVTRLSPNFREAVTLSRDCPVPLPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIGEVVALGLSAS  103 (362)
T ss_dssp             EEEEEECSCCSSHHHHEEEEEEEECCCCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEEEEEEECTTGG
T ss_pred             ceEEEEeecCCCccceeEEEeecCCCCCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEEEEEEECCCcc
Confidence            4455554333    34778 89999999999999999999999999999988764 246789999999999999999999


Q ss_pred             -CCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           84 -RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        84 -~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                       +|++||+|+..                                    ..|+|+||+.+|++.++++|++ + .++|+++
T Consensus       104 ~~~~vGdrV~~~------------------------------------~~G~~aey~~v~~~~~~~~P~~-~-~~aaal~  145 (362)
T 2c0c_A          104 ARYTVGQAVAYM------------------------------------APGSFAEYTVVPASIATPVPSV-K-PEYLTLL  145 (362)
T ss_dssp             GTCCTTCEEEEE------------------------------------CSCCSBSEEEEEGGGCEECSSS-C-HHHHTTT
T ss_pred             CCCCCCCEEEEc------------------------------------cCCcceeEEEEcHHHeEECCCC-c-hHhhccc
Confidence             99999999752                                    2489999999999999999996 3 4677899


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---H
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---M  238 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~  238 (344)
                      +++.|||+++.+...+++|++|||+|+ |++|++++|+|+..|++|+++++++++++.+ +++|++.++++++.+.   +
T Consensus       146 ~~~~ta~~al~~~~~~~~g~~VlV~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~-~~~Ga~~~~~~~~~~~~~~~  224 (362)
T 2c0c_A          146 VSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFL-KSLGCDRPINYKTEPVGTVL  224 (362)
T ss_dssp             THHHHHHHHHHHHTCCCTTCEEEETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTTSCHHHHH
T ss_pred             chHHHHHHHHHHhcCCCCCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHcCCcEEEecCChhHHHHH
Confidence            999999999988777799999999995 9999999999999999999999999998888 6899999998765433   2


Q ss_pred             HHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCc----cccC-----C--ceee------ee---------c
Q 019199          239 KALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK----VKFS-----P--ASLN------IG---------G  291 (344)
Q Consensus       239 ~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~----~~~~-----~--~~~~------~~---------~  291 (344)
                      .+.. +++|++||++|.. .+..++++++++|+++.+|....    ..++     .  ..+.      .+         .
T Consensus       225 ~~~~~~g~D~vid~~g~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~  303 (362)
T 2c0c_A          225 KQEYPEGVDVVYESVGGA-MFDLAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKY  303 (362)
T ss_dssp             HHHCTTCEEEEEECSCTH-HHHHHHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGH
T ss_pred             HHhcCCCCCEEEECCCHH-HHHHHHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhH
Confidence            3333 5799999999985 49999999999999999987521    1000     0  0010      11         1


Q ss_pred             hHhHHHHHHHHHhCCCccce---------EEEeCccHHHHHHHHHcCCcceEEEEEeCC
Q 019199          292 TKDTQEMLEYCAAHKIYPQI---------ETIPIENVNEALERLIKRDVKYRFVIDIQN  341 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~~~~~~---------~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~  341 (344)
                      .+.++++++++++|++++.+         +.|+++++++|++.+.+++..||+|+.+++
T Consensus       304 ~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~  362 (362)
T 2c0c_A          304 QAAMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH  362 (362)
T ss_dssp             HHHHHHHHHHHHTTCSCCCEECSTTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred             HHHHHHHHHHHHCCCeEeeeccccccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence            35689999999999998753         357999999999999998888999998763

>1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A*

Probab=100.00  E-value=4.2e-46  Score=340.48  Aligned_cols=301  Identities=21%  Similarity=0.301  Sum_probs=239.0

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      .+|++..+..++++..+++++.+.|+|++|||+|||.++|+|++|++.+.|..+ ...+|.++|||++|+|++.|  +++
T Consensus         3 ~~mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G~V~~~~--v~~   80 (330)
T 1tt7_A            3 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVSSN--DPR   80 (330)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEECS--STT
T ss_pred             CcceEEEEecCCCCcceeEeecCCCCCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEEEEEEcC--CCC
Confidence            345554444333345788999999999999999999999999999999888654 23578999999999999964  688


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++||||++.+..                             .|....|+|+||+.++++.++++|+++++++||.++++
T Consensus        81 ~~vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~iP~~l~~~~aa~l~~~  131 (330)
T 1tt7_A           81 FAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVYGTA  131 (330)
T ss_dssp             CCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHHHHH
T ss_pred             CCCCCEEEEcccc-----------------------------cCCCCCccceeEEEecHHHeEECCCCCCHHHHhhccch
Confidence            9999999764210                             01134699999999999999999999999999999999


Q ss_pred             hhHhHHHHHhc--cCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HH
Q 019199          165 GITVYTPMMRH--KMNQPGK-SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE--QM  238 (344)
Q Consensus       165 ~~ta~~~l~~~--~~~~~g~-~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~  238 (344)
                      +.|||.++...  ..+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++++++.+  .+
T Consensus       132 ~~ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~v~~~~~~~~~~~  210 (330)
T 1tt7_A          132 GFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDGTL  210 (330)
T ss_dssp             HHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSSCC
T ss_pred             HHHHHHHHHHHHhcCcCCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCcEEEECCCchHHHH
Confidence            99999877532  3458886 9999998 9999999999999999999999999999888 689999998865331  11


Q ss_pred             HHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee------ee------c----hHhHHHHH
Q 019199          239 KAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN------IG------G----TKDTQEML  299 (344)
Q Consensus       239 ~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~------~~------~----~~~~~~~~  299 (344)
                      .+. .+++|++||++|++ .+..++++++++|+++.+|...  ...++...+.      .+      .    .+.+++++
T Consensus       211 ~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~  289 (330)
T 1tt7_A          211 KALSKQQWQGAVDPVGGK-QLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMS  289 (330)
T ss_dssp             CSSCCCCEEEEEESCCTH-HHHHHHTTEEEEEEEEECCCSSCSCEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTT
T ss_pred             HHhhcCCccEEEECCcHH-HHHHHHHhhcCCCEEEEEecCCCCccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHH
Confidence            112 25799999999996 5999999999999999998762  2233221111      11      1    13456667


Q ss_pred             HHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          300 EYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       300 ~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +++.+|++++.+ ++|+++++++|++.+.+++..||+||++
T Consensus       290 ~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~  330 (330)
T 1tt7_A          290 SDLKPDQLLTIVDREVSLEETPGALKDILQNRIQGRVIVKL  330 (330)
T ss_dssp             TTSCCSCSTTSEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred             HHHhcCCcccccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence            777788898877 8999999999999999988889999864

>1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1

Probab=100.00  E-value=3.5e-45  Score=334.08  Aligned_cols=299  Identities=20%  Similarity=0.323  Sum_probs=235.8

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ||+..+..++++..+++++.+.|+|+++||+|||.++|||++|++.+.|..+ ...+|.++|||++|+|++.  ++++|+
T Consensus         4 mka~~~~~~g~~~~l~~~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G~V~~~--~v~~~~   81 (328)
T 1xa0_A            4 FQAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVSS--QHPRFR   81 (328)
T ss_dssp             EEEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEEC--CSSSCC
T ss_pred             ceEEEEecCCCcceeEEEeccCCCCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEEEEEec--CCCCCC
Confidence            4444444333334688899999999999999999999999999999888654 2457899999999999995  468899


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+..+..                             .|....|+|+||+++|++.++++|+++++++||.+++++.
T Consensus        82 vGdrV~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~~~~~P~~l~~~~aa~~~~~~~  132 (328)
T 1xa0_A           82 EGDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLTLKEAMAIGTAGF  132 (328)
T ss_dssp             TTCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTCCHHHHHHHHHHHH
T ss_pred             CCCEEEEcccc-----------------------------CCCCCCccceeEEEechHHeEECCCCCCHHHhhhhhhhHH
Confidence            99999764210                             0113468999999999999999999999999999999999


Q ss_pred             HhHHHHHhc--cCCCCCC-EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHH--HHHH
Q 019199          167 TVYTPMMRH--KMNQPGK-SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLE--QMKA  240 (344)
Q Consensus       167 ta~~~l~~~--~~~~~g~-~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~--~~~~  240 (344)
                      |||.++...  ..+++|+ +|||+|+ |++|++++|+|+.+|++|+++++++++++.+ +++|+++++++.+.+  .+.+
T Consensus       133 ta~~~l~~~~~~~~~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~-~~lGa~~~i~~~~~~~~~~~~  211 (328)
T 1xa0_A          133 TAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKEVLAREDVMAERIRP  211 (328)
T ss_dssp             HHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSEEEECC---------
T ss_pred             HHHHHHHHHhhcCCCCCCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCcEEEecCCcHHHHHHH
Confidence            999877532  3458886 9999998 9999999999999999999999999999888 689999999887642  2233


Q ss_pred             hc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCCceee------ee------c----hHhHHHHHHH
Q 019199          241 LG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSPASLN------IG------G----TKDTQEMLEY  301 (344)
Q Consensus       241 ~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~~~~~------~~------~----~~~~~~~~~~  301 (344)
                      .. +++|++||++|+. .+..++++++++|+++.+|...  ...++...+.      .+      .    .+.+++++++
T Consensus       212 ~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~  290 (328)
T 1xa0_A          212 LDKQRWAAAVDPVGGR-TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGD  290 (328)
T ss_dssp             CCSCCEEEEEECSTTT-THHHHHHTEEEEEEEEECSCCSSSCCCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTT
T ss_pred             hcCCcccEEEECCcHH-HHHHHHHhhccCCEEEEEeecCCCCCCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHH
Confidence            33 5799999999986 5999999999999999998762  2223222111      11      1    1345666666


Q ss_pred             HHhCCCccceEEEeCccHHHHHHHHHcCCcceEEEEEeC
Q 019199          302 CAAHKIYPQIETIPIENVNEALERLIKRDVKYRFVIDIQ  340 (344)
Q Consensus       302 ~~~g~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvi~~~  340 (344)
                      +.++ +++.+++|+++++++|++.+.+++..||+||+++
T Consensus       291 ~~~g-l~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~  328 (328)
T 1xa0_A          291 LKPD-LERIAQEISLAELPQALKRILRGELRGRTVVRLA  328 (328)
T ss_dssp             TCCC-HHHHEEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred             HHcC-CceeeeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence            6677 7776799999999999999999988899999863

>3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha}

Probab=100.00  E-value=6.1e-46  Score=345.24  Aligned_cols=300  Identities=16%  Similarity=0.152  Sum_probs=242.4

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC------------------------
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG------------------------   59 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~------------------------   59 (344)
                      |+..++++++....++..+++++.+.|+|++|||||||.+++||++|++.+.|..+                        
T Consensus         2 m~~~~~mka~v~~~~~~~l~~~~~~~P~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~~~~~p~~~~   81 (379)
T 3iup_A            2 MHSALQLRSRIKSSGELELSLDSIDTPHPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIVTARVPEGAM   81 (379)
T ss_dssp             -CEEEEEEEEECTTSEEEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEEEEECCHHHH
T ss_pred             CCchhhHHHHHhcCCCCceEEEeccCCCCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccccccCccccc
Confidence            34455666776654566789999999999999999999999999999999887521                        


Q ss_pred             -----CCCCCCCcccccceEEEEecCCC-CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCC
Q 019199           60 -----DSKYPLVPGHEIVGIVKEVGHNV-SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKG  133 (344)
Q Consensus        60 -----~~~~p~~~G~e~~G~V~~~G~~~-~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g  133 (344)
                           ...+|.++|||++|+|+++|+++ ++|++||+|+..                                    ..|
T Consensus        82 ~~~~~~~~~p~i~G~e~~G~V~~vG~~v~~~~~vGdrV~~~------------------------------------~~G  125 (379)
T 3iup_A           82 RSMAGRLDASMPVGNEGAGVVVEAGSSPAAQALMGKTVAAI------------------------------------GGA  125 (379)
T ss_dssp             HHHGGGTTEEEECCSCEEEEEEEECSSHHHHTTTTCEEEEC------------------------------------CSC
T ss_pred             cccccccCCCccceeeeEEEEEEeCCCcccCCCCCCEEEec------------------------------------CCC
Confidence                 23568899999999999999999 899999999753                                    248


Q ss_pred             cceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE--CCChHHHHHHHHHHHCCCeEEEEe
Q 019199          134 GYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI--GLGGLGHMAVKFGKAFGLNVTVLS  211 (344)
Q Consensus       134 ~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~--Gag~~G~~ai~~a~~~g~~V~~~~  211 (344)
                      +|+||++++++.++++|+++++++||++++...|||+++....  ++|++|||+  |+|++|++++|+|+.+|++|++++
T Consensus       126 ~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~~~~~~~~--~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~  203 (379)
T 3iup_A          126 MYSQYRCIPADQCLVLPEGATPADGASSFVNPLTALGMVETMR--LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIV  203 (379)
T ss_dssp             CSBSEEEEEGGGEEECCTTCCHHHHTTSSHHHHHHHHHHHHHH--HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEE
T ss_pred             cceeEEEeCHHHeEECCCCCCHHHHHhhhhhHHHHHHHHHHhc--cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEE
Confidence            9999999999999999999999999999999999998776654  899999999  459999999999999999999999


Q ss_pred             CCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc--CCccEEEECCCCchhHHHHHHhccc-----C-----------CE
Q 019199          212 TSTSKKEEALSLLGADKFVVSSDLEQMK---ALG--KSLDFIIDTASGDHPFDAYMSLLKV-----A-----------GV  270 (344)
Q Consensus       212 ~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~--~~~dvvid~~g~~~~~~~~~~~l~~-----~-----------G~  270 (344)
                      +++++++.+ +++|+++++++++.+..+   +.+  +++|++||++|++..+..+++++++     +           |+
T Consensus       204 ~~~~~~~~~-~~lGa~~~~~~~~~~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~  282 (379)
T 3iup_A          204 RKQEQADLL-KAQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQ  282 (379)
T ss_dssp             SSHHHHHHH-HHTTCSCEEETTSTTHHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEE
T ss_pred             CCHHHHHHH-HhCCCcEEEeCCChHHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCce
Confidence            999999888 689999999988765433   332  4799999999998767888888864     3           67


Q ss_pred             EEEEcCCC--ccccCCc---eee-ee----------ch----HhHHHHHHHHHhCCCccce-EEEeCccH--HHHHHHHH
Q 019199          271 YVLVGFPS--KVKFSPA---SLN-IG----------GT----KDTQEMLEYCAAHKIYPQI-ETIPIENV--NEALERLI  327 (344)
Q Consensus       271 iv~~g~~~--~~~~~~~---~~~-~~----------~~----~~~~~~~~~~~~g~~~~~~-~~~~~~~~--~~a~~~~~  327 (344)
                      ++.+|...  ...+...   ... .+          ..    +.++++++++.+ .+++.+ ++|+++++  ++|++.+.
T Consensus       283 iv~~G~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~  361 (379)
T 3iup_A          283 VYLYGGLDTSPTEFNRNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYN  361 (379)
T ss_dssp             EEECCCSEEEEEEECCCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHT
T ss_pred             EEEecCCCCCccccccccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHh
Confidence            76666541  1112111   011 11          11    234566666666 577766 89999999  99999999


Q ss_pred             cCCcceEEEEEeCCCC
Q 019199          328 KRDVKYRFVIDIQNSL  343 (344)
Q Consensus       328 ~~~~~gkvvi~~~~~~  343 (344)
                      +++..||+||+++..+
T Consensus       362 ~~~~~gKvVv~~~~g~  377 (379)
T 3iup_A          362 KRATGEKYLINPNKGL  377 (379)
T ss_dssp             TCCTTCCEEEETTTTC
T ss_pred             cCCCCceEEEeCCCCC
Confidence            9999999999988654

>2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A*

Probab=100.00  E-value=2e-43  Score=326.06  Aligned_cols=283  Identities=14%  Similarity=0.112  Sum_probs=236.3

Q ss_pred             CCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcC----CCC-CCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199           20 GVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRN----KHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        20 ~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g----~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      +.+++++.+.|+| ++|||+|||.++|||++|++.+.+    .+. ...+|.++|||++|+|++  +++++|++||+|+.
T Consensus        27 ~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~E~~G~V~~--~~v~~~~vGdrV~~  104 (357)
T 2zb4_A           27 ENFRMEEVYLPDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDGGGIGIIEE--SKHTNLTKGDFVTS  104 (357)
T ss_dssp             GGEEEEEEECCSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEEEEEEEEEE--ECSTTCCTTCEEEE
T ss_pred             CceEEEeecCCCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccccEEEEEEe--cCCCCCCCCCEEEe
Confidence            6688999999999 999999999999999999887765    222 345788999999999999  88899999999974


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCC-----CcccccccchhhhHh
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDY-----PLALAAPLLCAGITV  168 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~-----~~~~aa~l~~~~~ta  168 (344)
                      .                                     .|+|+||+.++++.++++|+++     +.. ++++++++.||
T Consensus       105 ~-------------------------------------~G~~aey~~v~~~~~~~iP~~~~~~~~~~~-~a~l~~~~~ta  146 (357)
T 2zb4_A          105 F-------------------------------------YWPWQTKVILDGNSLEKVDPQLVDGHLSYF-LGAIGMPGLTS  146 (357)
T ss_dssp             E-------------------------------------EEESBSEEEEEGGGCEECCGGGGTTCGGGG-GTTTSHHHHHH
T ss_pred             c-------------------------------------CCCcEEEEEEchHHceecCcccccCchhHH-HHhcccHHHHH
Confidence            2                                     2789999999999999999999     444 77899999999


Q ss_pred             HHHHHhccCCCCC--CEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH---HHHh
Q 019199          169 YTPMMRHKMNQPG--KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ---MKAL  241 (344)
Q Consensus       169 ~~~l~~~~~~~~g--~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~---~~~~  241 (344)
                      |+++.+...+++|  ++|||+|+ |++|++++|+++..|+ +|+++++++++++.+.+++|++.+++..+.+.   +.+.
T Consensus       147 ~~al~~~~~~~~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~  226 (357)
T 2zb4_A          147 LIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKDNVAEQLRES  226 (357)
T ss_dssp             HHHHHHHSCCCTTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTSCHHHHHHHH
T ss_pred             HHHHHHhcCCCCCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCchHHHHHHHHh
Confidence            9999766677999  99999998 9999999999999999 99999999999888854599999998876433   3333


Q ss_pred             c-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC--ccccCC---------ceee------ee----c-----hHh
Q 019199          242 G-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS--KVKFSP---------ASLN------IG----G-----TKD  294 (344)
Q Consensus       242 ~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~--~~~~~~---------~~~~------~~----~-----~~~  294 (344)
                      . +++|++||++|+. .+..++++++++|+++.+|...  ...++.         ..+.      .+    .     .+.
T Consensus       227 ~~~~~d~vi~~~G~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~  305 (357)
T 2zb4_A          227 CPAGVDVYFDNVGGN-ISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPG  305 (357)
T ss_dssp             CTTCEEEEEESCCHH-HHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHH
T ss_pred             cCCCCCEEEECCCHH-HHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHH
Confidence            3 4799999999974 5999999999999999998751  112221         0010      11    1     456


Q ss_pred             HHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          295 TQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       295 ~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                      ++++++++.+|++++.+ .+|+++++++|++.+.+++..||+|+++++++
T Consensus       306 ~~~~~~l~~~g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~~  355 (357)
T 2zb4_A          306 ILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEEI  355 (357)
T ss_dssp             HHHHHHHHHTTCCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCCC
T ss_pred             HHHHHHHHHcCCCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEeccc
Confidence            89999999999999865 77999999999999999888899999998754

>1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D

Probab=100.00  E-value=1.3e-43  Score=319.98  Aligned_cols=278  Identities=22%  Similarity=0.375  Sum_probs=230.8

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCC-CCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGD-SKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~-~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      +++...++.+...+++.+.|+|++|||+|||.++|+|++|++.+.|..+. ..+|.++|||++|+|+           ||
T Consensus         2 ka~~~~~~g~~~~l~~~~~p~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~-----------Gd   70 (302)
T 1iz0_A            2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVVE-----------GR   70 (302)
T ss_dssp             EEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEET-----------TE
T ss_pred             eEEEEcCCCCchheEECCCCCCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEEEEE-----------Cc
Confidence            34444433333345688999999999999999999999999999886653 3679999999999997           99


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|+..+                                   ..|+|+||+.++++.++++|+++++++||++++++.|||
T Consensus        71 rV~~~~-----------------------------------~~G~~aey~~v~~~~~~~iP~~~~~~~aa~l~~~~~ta~  115 (302)
T 1iz0_A           71 RYAALV-----------------------------------PQGGLAERVAVPKGALLPLPEGLSPEEAAAFPVSFLTAY  115 (302)
T ss_dssp             EEEEEC-----------------------------------SSCCSBSEEEEEGGGCEECCTTCCHHHHHTSHHHHHHHH
T ss_pred             EEEEec-----------------------------------CCcceeeEEEEcHHHcEeCCCCCCHHHHHHhhhHHHHHH
Confidence            997532                                   248999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HHHHHHhcCCccE
Q 019199          170 TPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQMKALGKSLDF  247 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~~~~~~~~~dv  247 (344)
                      +++.+.. +++|++|||+|+ |++|++++|+++.+|++|+++++++++++.+ +++|+++++++++ .+..+.+ +++|+
T Consensus       116 ~~l~~~~-~~~g~~vlV~Ga~G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~-~~~ga~~~~~~~~~~~~~~~~-~~~d~  192 (302)
T 1iz0_A          116 LALKRAQ-ARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEAATYAEVPERAKAW-GGLDL  192 (302)
T ss_dssp             HHHHHTT-CCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEEEEGGGHHHHHHHT-TSEEE
T ss_pred             HHHHHhc-CCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCCEEEECCcchhHHHHh-cCceE
Confidence            9998666 799999999998 9999999999999999999999999998888 6899999999877 5555555 78999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEEcCC-Cc-cccCCceee------ee--------chHhHHHHHH---HHHhCCCc
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SK-VKFSPASLN------IG--------GTKDTQEMLE---YCAAHKIY  308 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~-~~~~~~~~~------~~--------~~~~~~~~~~---~~~~g~~~  308 (344)
                      +|| +|+. .+..++++++++|+++.+|.. .. ..++...+.      .+        ..+.++++++   ++.+|+++
T Consensus       193 vid-~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~  270 (302)
T 1iz0_A          193 VLE-VRGK-EVEESLGLLAHGGRLVYIGAAEGEVAPIPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRELR  270 (302)
T ss_dssp             EEE-CSCT-THHHHHTTEEEEEEEEEC-------CCCCTTHHHHTTCEEEECCHHHHTTCHHHHHHHHHHHGGGBTTTBC
T ss_pred             EEE-CCHH-HHHHHHHhhccCCEEEEEeCCCCCCCCcCHHHHHhCCCeEEEEeccchhhhHHHHHHHHhhhHHHHcCCcc
Confidence            999 9885 599999999999999999876 21 122222111      11        3467889999   99999999


Q ss_pred             cce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          309 PQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       309 ~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      +.+ ++|+++++++|++.+.+++..||+++++
T Consensus       271 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~  302 (302)
T 1iz0_A          271 PVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL  302 (302)
T ss_dssp             CCEEEEEEGGGHHHHHHHTTCTTCCBEEEEEC
T ss_pred             cccceEEcHHHHHHHHHHHHcCCCCceEEEeC
Confidence            876 8999999999999999888889999864

>3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa}

Probab=100.00  E-value=3.3e-43  Score=353.06  Aligned_cols=285  Identities=20%  Similarity=0.266  Sum_probs=239.6

Q ss_pred             cCCCCCccceeecc--CCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEE
Q 019199           16 RDPSGVLSPYSFNR--RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGV   93 (344)
Q Consensus        16 ~~~~~~~~~~~~~~--p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~   93 (344)
                      ++.++.+++.+.+.  |+|++|||+|||.++|||++|++.+.|..+   .|.++|||++|+|+++|+++++|++||+|+.
T Consensus       218 ~G~~~~L~~~~~~~p~~~~~~~eVlV~V~a~gin~~D~~~~~G~~~---~~~~lG~E~aG~V~~vG~~V~~~~vGDrV~~  294 (795)
T 3slk_A          218 PGSLDGLALVDEPTATAPLGDGEVRIAMRAAGVNFRDALIALGMYP---GVASLGSEGAGVVVETGPGVTGLAPGDRVMG  294 (795)
T ss_dssp             TTSSTTEEECCCHHHHSCCCSSEEEEEEEEEEECHHHHHHTTTCCS---SCCCSCCCEEEEEEEECSSCCSSCTTCEEEE
T ss_pred             CCCccceEEEeCCccCCCCCCCEEEEEEEEEccCHHHHHHHcCCCC---CCccccceeEEEEEEeCCCCCcCCCCCEEEE
Confidence            34456677777664  678999999999999999999999988654   3567999999999999999999999999974


Q ss_pred             eccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHH
Q 019199           94 GTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMM  173 (344)
Q Consensus        94 ~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~  173 (344)
                      .                                    ..|+|++|+.++++.++++|+++++++||++++.+.|||+++.
T Consensus       295 ~------------------------------------~~G~~ae~~~v~~~~~~~iP~~ls~~~AA~l~~~~~Ta~~al~  338 (795)
T 3slk_A          295 M------------------------------------IPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVFLTAYYALV  338 (795)
T ss_dssp             C------------------------------------CSSCSSSEEEEETTSEEECCTTCCHHHHHHHHHHHHHHHCCCC
T ss_pred             E------------------------------------ecCCCcCEEEeehHHEEECCCCCCHHHHHhhhHHHHHHHHHHH
Confidence            2                                    3489999999999999999999999999999999999999998


Q ss_pred             hccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH---Hhc--CCccE
Q 019199          174 RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK---ALG--KSLDF  247 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~---~~~--~~~dv  247 (344)
                      +..++++|++|||+|+ |++|++++|+||.+|++|+++++++ +.+.+  ++|+++++++++.+..+   +.+  +++|+
T Consensus       339 ~~a~l~~G~~VLI~gaaGgvG~~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~~~~~~i~~~t~g~GvDv  415 (795)
T 3slk_A          339 DLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTCDFEQQFLGATGGRGVDV  415 (795)
T ss_dssp             CCTCCCTTCCEEEESTTBHHHHHHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSSTHHHHHHHHSCSSCCSE
T ss_pred             HHhCCCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCChhHHHHHHHHcCCCCeEE
Confidence            8888899999999997 9999999999999999999998665 54444  38999999987755433   333  58999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEEcCCC---cccc----CCceee---------eechHhHHHHHHHHHhCCCccce
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKF----SPASLN---------IGGTKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~----~~~~~~---------~~~~~~~~~~~~~~~~g~~~~~~  311 (344)
                      |||+++++. +..++++++++|+++.+|...   ...+    ....+.         ....+.++++++++++|++++.+
T Consensus       416 Vld~~gg~~-~~~~l~~l~~~Gr~v~iG~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~  494 (795)
T 3slk_A          416 VLNSLAGEF-ADASLRMLPRGGRFLELGKTDVRDPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLP  494 (795)
T ss_dssp             EEECCCTTT-THHHHTSCTTCEEEEECCSTTCCCHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCC
T ss_pred             EEECCCcHH-HHHHHHHhcCCCEEEEeccccccCcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCc
Confidence            999999865 899999999999999999751   1111    111111         11135689999999999999865


Q ss_pred             -EEEeCccHHHHHHHHHcCCcceEEEEEeCCCC
Q 019199          312 -ETIPIENVNEALERLIKRDVKYRFVIDIQNSL  343 (344)
Q Consensus       312 -~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~~  343 (344)
                       ++|+++++++||+.+.+++..||+||.+++.+
T Consensus       495 ~~~~~l~~~~eA~~~l~~g~~~GKvVl~~~~~~  527 (795)
T 3slk_A          495 VTAWDVRQAPEALRHLSQARHVGKLVLTMPPVW  527 (795)
T ss_dssp             EEEEEGGGHHHHHHHHHHTCCCBEEEEECCCCC
T ss_pred             ceeEcHHHHHHHHHHHhcCCccceEEEecCccc
Confidence             89999999999999999999999999987644

>2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A*

Probab=100.00  E-value=4.1e-41  Score=309.27  Aligned_cols=298  Identities=17%  Similarity=0.143  Sum_probs=236.0

Q ss_pred             cccccceeeeeec--CCCC--Cccce--eeccCC-CCCCcEEEEEeeeecccchhhhhcCCCCC----CCCCCCcccccc
Q 019199            4 ETASKDCLGWAAR--DPSG--VLSPY--SFNRRA-VGSDDVSITITHCGVCYADVIWTRNKHGD----SKYPLVPGHEIV   72 (344)
Q Consensus         4 ~~~~~~~~~~~~~--~~~~--~~~~~--~~~~p~-~~~~evlV~v~~~~i~~~D~~~~~g~~~~----~~~p~~~G~e~~   72 (344)
                      |+.+||+..+..+  +.++  .++++  +++.|+ |++|||||||.++|+|+.|. ...|....    ..+|.++|||++
T Consensus         1 m~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~   79 (345)
T 2j3h_A            1 MTATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQ   79 (345)
T ss_dssp             CEEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCE
T ss_pred             CCccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeee
Confidence            3344555444433  3455  68887  888887 89999999999999988874 34444321    246889999999


Q ss_pred             eEEEE--ecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce--EEE
Q 019199           73 GIVKE--VGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY--CYK  148 (344)
Q Consensus        73 G~V~~--~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~--~~~  148 (344)
                      |++++  +|+.+++|++||+|+.                                      .|+|+||+.++++.  +++
T Consensus        80 G~~~~GvV~~~v~~~~vGdrV~~--------------------------------------~g~~aey~~v~~~~~~~~~  121 (345)
T 2j3h_A           80 GYGVSRIIESGHPDYKKGDLLWG--------------------------------------IVAWEEYSVITPMTHAHFK  121 (345)
T ss_dssp             EEEEEEEEEECSTTCCTTCEEEE--------------------------------------EEESBSEEEECCCTTTCEE
T ss_pred             cceEEEEEecCCCCCCCCCEEEe--------------------------------------ecCceeEEEecccccceee
Confidence            99999  9999999999999963                                      26899999999876  999


Q ss_pred             cCC---CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC
Q 019199          149 IAN---DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL  224 (344)
Q Consensus       149 ~P~---~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~  224 (344)
                      +|+   ++++. +|++++++.|||+++.+...+++|++|||+|+ |++|++++|+++..|++|+++++++++++.+.+++
T Consensus       122 ip~~~~~~~~~-aa~l~~~~~ta~~al~~~~~~~~g~~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~  200 (345)
T 2j3h_A          122 IQHTDVPLSYY-TGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKF  200 (345)
T ss_dssp             ECCCSSCTTGG-GTTTSHHHHHHHHHHHTTSCCCTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTS
T ss_pred             cCCCCCCHHHH-HHhccccHHHHHHHHHHHhCCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHc
Confidence            996   35555 67899999999999977777799999999997 99999999999999999999999999998884479


Q ss_pred             CCcEEEeCCCH----HHHHHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC-------ccccCCceee----
Q 019199          225 GADKFVVSSDL----EQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS-------KVKFSPASLN----  288 (344)
Q Consensus       225 g~~~~v~~~~~----~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~-------~~~~~~~~~~----  288 (344)
                      |++.++|..+.    +.+.+.. +++|++||++|+. .+..++++++++|+++.+|...       ...++...+.    
T Consensus       201 g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~-~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~  279 (345)
T 2j3h_A          201 GFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGK-MLDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRN  279 (345)
T ss_dssp             CCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHH-HHHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTC
T ss_pred             CCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHH-HHHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhce
Confidence            99998887642    2333333 5799999999985 5999999999999999998652       1222222111    


Q ss_pred             --ee----c-----hHhHHHHHHHHHhCCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          289 --IG----G-----TKDTQEMLEYCAAHKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       289 --~~----~-----~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                        .+    .     .+.++++++++++|++++.+ .+|+++++++|++.+.+++..||+|+.++++
T Consensus       280 ~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~~  345 (345)
T 2j3h_A          280 RIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE  345 (345)
T ss_dssp             EEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEESGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred             eeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccCCHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence              11    1     12388999999999999877 5899999999999999999899999998753

>1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A*

Probab=100.00  E-value=8.2e-40  Score=299.15  Aligned_cols=274  Identities=19%  Similarity=0.177  Sum_probs=225.8

Q ss_pred             CCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccC
Q 019199           20 GVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNS   99 (344)
Q Consensus        20 ~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~   99 (344)
                      +.+++++.+.|+|++|||+|||.++|||+.|..+ .   ....+|.++|||++|+|++.  .+++|++||||+.      
T Consensus        24 ~~l~~~e~~~P~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G~Vv~~--~v~~~~vGdrV~~------   91 (333)
T 1v3u_A           24 SDFELKTVELPPLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVARVVES--KNSAFPAGSIVLA------   91 (333)
T ss_dssp             GGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEEEEEEE--SCTTSCTTCEEEE------
T ss_pred             cceEEEeCCCCCCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEEEEEec--CCCCCCCCCEEEe------
Confidence            5688889999999999999999999999998732 1   12356788999999999995  5789999999963      


Q ss_pred             CCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCC----CCccc-ccccchhhhHhHHHHHh
Q 019199          100 CRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAND----YPLAL-AAPLLCAGITVYTPMMR  174 (344)
Q Consensus       100 c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~----~~~~~-aa~l~~~~~ta~~~l~~  174 (344)
                                                      .|+|+||+.++++.++++|++    +++.+ +|++++++.|||+++.+
T Consensus        92 --------------------------------~g~~aey~~v~~~~~~~iP~~~~~~~~~~~a~a~l~~~~~ta~~al~~  139 (333)
T 1v3u_A           92 --------------------------------QSGWTTHFISDGKGLEKLLTEWPDKLPLSLALGTIGMPGLTAYFGLLE  139 (333)
T ss_dssp             --------------------------------CCCSBSEEEESSTTEEECC--CCTTSCGGGGGTTTSHHHHHHHHHHHT
T ss_pred             --------------------------------cCceEEEEEechHHeEEcCcccccCCCHHHHHHHhCChHHHHHHHHHH
Confidence                                            278999999999999999997    88887 48999999999999977


Q ss_pred             ccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC-HHH---HHHhc-CCccEE
Q 019199          175 HKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD-LEQ---MKALG-KSLDFI  248 (344)
Q Consensus       175 ~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~-~~~---~~~~~-~~~dvv  248 (344)
                      ...+++|++|||+|+ |++|++++++++..|++|+++++++++++.+ +++|++.++|..+ .+.   +.+.. +++|++
T Consensus       140 ~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~v  218 (333)
T 1v3u_A          140 VCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNSLEEALKKASPDGYDCY  218 (333)
T ss_dssp             TSCCCSSCEEEEESTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSCSCHHHHHHHHCTTCEEEE
T ss_pred             hhCCCCCCEEEEecCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HhcCCcEEEecCCHHHHHHHHHHHhCCCCeEE
Confidence            777799999999998 9999999999999999999999999998888 7899998888765 332   33332 579999


Q ss_pred             EECCCCchhHHHHHHhcccCCEEEEEcCCCc-------cc-cCCceee------ee----c------hHhHHHHHHHHHh
Q 019199          249 IDTASGDHPFDAYMSLLKVAGVYVLVGFPSK-------VK-FSPASLN------IG----G------TKDTQEMLEYCAA  304 (344)
Q Consensus       249 id~~g~~~~~~~~~~~l~~~G~iv~~g~~~~-------~~-~~~~~~~------~~----~------~~~~~~~~~~~~~  304 (344)
                      ||++|... +..++++++++|+++.+|....       .. ++...+.      .+    .      .+.++++++++++
T Consensus       219 i~~~g~~~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~  297 (333)
T 1v3u_A          219 FDNVGGEF-LNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLE  297 (333)
T ss_dssp             EESSCHHH-HHHHHTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHT
T ss_pred             EECCChHH-HHHHHHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHC
Confidence            99999865 9999999999999999987521       11 1111110      11    1      3467889999999


Q ss_pred             CCCccce-EEEeCccHHHHHHHHHcCCcceEEEEEe
Q 019199          305 HKIYPQI-ETIPIENVNEALERLIKRDVKYRFVIDI  339 (344)
Q Consensus       305 g~~~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~  339 (344)
                      |++++.. ..|+++++++|++.+.+++..||+|+++
T Consensus       298 g~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~  333 (333)
T 1v3u_A          298 GKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVVTA  333 (333)
T ss_dssp             TSSCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEEC
T ss_pred             CCccCccccccCHHHHHHHHHHHHcCCCCceEEEeC
Confidence            9999865 6789999999999999988889999974

>2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A*

Probab=99.98  E-value=2.4e-31  Score=292.48  Aligned_cols=263  Identities=18%  Similarity=0.238  Sum_probs=213.6

Q ss_pred             CCcEEEEEeeeecccchhhhhcCCCCCC-------CCCCCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccc
Q 019199           34 SDDVSITITHCGVCYADVIWTRNKHGDS-------KYPLVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYC  106 (344)
Q Consensus        34 ~~evlV~v~~~~i~~~D~~~~~g~~~~~-------~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~  106 (344)
                      ++||+|||.++|+|+.|+....|..+..       ..|.++|+|++|+|          .+||+|+...           
T Consensus      1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG~V----------~vGdrV~g~~----------- 1617 (2512)
T 2vz8_A         1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSGRD----------ASGRRVMGMV----------- 1617 (2512)
T ss_dssp             HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEEEE----------TTSCCEEEEC-----------
T ss_pred             CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEEEE----------ccCCEEEEee-----------
Confidence            7999999999999999999988865421       23568999999987          2799997432           


Q ss_pred             cCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEE
Q 019199          107 NDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV  186 (344)
Q Consensus       107 ~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI  186 (344)
                                              ..|+|++|+.++++.++++|+++++++||++++.+.|||+++....++++|++|||
T Consensus      1618 ------------------------~~G~~Aeyv~vp~~~v~~iPd~ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI 1673 (2512)
T 2vz8_A         1618 ------------------------PAEGLATSVLLLQHATWEVPSTWTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLI 1673 (2512)
T ss_dssp             ------------------------SSCCSBSEEECCGGGEEECCTTSCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEE
T ss_pred             ------------------------cCCceeeEEEcccceEEEeCCCCCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEE
Confidence                                    34899999999999999999999999999999999999999988888899999999


Q ss_pred             ECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcEEEeCCCHHHHHH---hc--CCccEEEECCCCchh
Q 019199          187 IGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKFVVSSDLEQMKA---LG--KSLDFIIDTASGDHP  257 (344)
Q Consensus       187 ~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~---~~--~~~dvvid~~g~~~~  257 (344)
                      +|+ |++|++++|+||.+|++|++++.++++.+.+.+.   +|+++++++++.+..++   .+  +++|+|||++++. .
T Consensus      1674 ~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~k~~~l~~~~~~lga~~v~~~~~~~~~~~i~~~t~g~GvDvVld~~g~~-~ 1752 (2512)
T 2vz8_A         1674 HSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQHVLRHTAGKGVDLVLNSLAEE-K 1752 (2512)
T ss_dssp             TTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTCCSTTEEESSSSHHHHHHHHTTTSCCEEEEEECCCHH-H
T ss_pred             EeCChHHHHHHHHHHHHcCCEEEEEeCChhhhHHHHhhcCCCCceEEecCCCHHHHHHHHHhcCCCCceEEEECCCch-H
Confidence            986 9999999999999999999999999998888543   67899999887654433   33  5799999999854 5


Q ss_pred             HHHHHHhcccCCEEEEEcCC---Ccccc------CCceee---e-----echHhHHHHHHHH----HhCCCccce-EEEe
Q 019199          258 FDAYMSLLKVAGVYVLVGFP---SKVKF------SPASLN---I-----GGTKDTQEMLEYC----AAHKIYPQI-ETIP  315 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~~---~~~~~------~~~~~~---~-----~~~~~~~~~~~~~----~~g~~~~~~-~~~~  315 (344)
                      +..++++++++|+++.+|..   ....+      ....+.   .     ...+.++++++++    .+|.+++.+ ++|+
T Consensus      1753 l~~~l~~L~~~Gr~V~iG~~~~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~ 1832 (2512)
T 2vz8_A         1753 LQASVRCLAQHGRFLEIGKFDLSNNHALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFP 1832 (2512)
T ss_dssp             HHHHHTTEEEEEEEEECCCHHHHTTCEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEE
T ss_pred             HHHHHHhcCCCcEEEEeecccccccCcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEec
Confidence            99999999999999999854   11111      011111   0     1123455555554    467888765 8999


Q ss_pred             CccHHHHHHHHHcCCcceEEEEEeCCC
Q 019199          316 IENVNEALERLIKRDVKYRFVIDIQNS  342 (344)
Q Consensus       316 ~~~~~~a~~~~~~~~~~gkvvi~~~~~  342 (344)
                      ++++++|++.+.+++..||+|+.++.+
T Consensus      1833 l~ei~eA~~~l~~g~~~GKvVi~~~~~ 1859 (2512)
T 2vz8_A         1833 RTKVEAAFRYMAQGKHIGKVVIQVREE 1859 (2512)
T ss_dssp             SSTHHHHHHHHHTTCCSSEEEEECSCC
T ss_pred             HHHHHHHHHhhhccCccceEEEECCCc
Confidence            999999999999999899999998753

>1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1

Probab=99.83  E-value=6.1e-20  Score=154.76  Aligned_cols=166  Identities=20%  Similarity=0.255  Sum_probs=122.1

Q ss_pred             ceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH
Q 019199          144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS  222 (344)
Q Consensus       144 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~  222 (344)
                      +.++++|+++++++||++++++.|||+++.+...+++|++|||+|+ |++|++++++++..|++|+++++++++.+.+ +
T Consensus         2 ~~~~~~P~~~~~~~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~-~   80 (198)
T 1pqw_A            2 DLVVPIPDTLADNEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-S   80 (198)
T ss_dssp             ------------CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-H
T ss_pred             CceeECCCCCCHHHHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH-H
Confidence            5689999999999999999999999999987777799999999996 9999999999999999999999998888777 6


Q ss_pred             hCCCcEEEeCCCHHHH---HHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCC---ccccCC------ceee
Q 019199          223 LLGADKFVVSSDLEQM---KALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPS---KVKFSP------ASLN  288 (344)
Q Consensus       223 ~~g~~~~v~~~~~~~~---~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~---~~~~~~------~~~~  288 (344)
                      ++|++.+++..+.+..   .+..  +++|++||++|.. .+..++++++++|+++.+|...   ..+++.      ..+.
T Consensus        81 ~~g~~~~~d~~~~~~~~~~~~~~~~~~~D~vi~~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~  159 (198)
T 1pqw_A           81 RLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGE-AIQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFS  159 (198)
T ss_dssp             TTCCSEEEETTCSTHHHHHHHHTTTCCEEEEEECCCTH-HHHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEE
T ss_pred             HcCCCEEeeCCcHHHHHHHHHHhCCCCCeEEEECCchH-HHHHHHHHhccCCEEEEEcCCCCcCcCcCChhHhcCCcEEE
Confidence            7899888887654332   2222  4799999999865 4999999999999999998652   111111      1111


Q ss_pred             e---------ec---hHhHHHHHHHHHhCCCccce
Q 019199          289 I---------GG---TKDTQEMLEYCAAHKIYPQI  311 (344)
Q Consensus       289 ~---------~~---~~~~~~~~~~~~~g~~~~~~  311 (344)
                      .         ..   .+.++++++++++|++++.+
T Consensus       160 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~  194 (198)
T 1pqw_A          160 VVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLP  194 (198)
T ss_dssp             ECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred             EEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCC
Confidence            0         11   35688899999999998754

>2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus}

Probab=99.08  E-value=1.1e-09  Score=94.86  Aligned_cols=170  Identities=9%  Similarity=-0.018  Sum_probs=107.0

Q ss_pred             CCCCCEEEEecc------ccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc
Q 019199           85 FKVGDHVGVGTY------VNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA  158 (344)
Q Consensus        85 ~~~Gd~V~~~~~------~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a  158 (344)
                      +++||+|++.+.      .-.|+.|.+|..|..+.|.....           ..|...      +..+++.|+.....+.
T Consensus         4 ~~~Gd~V~~~~~~~~~~~~~~~g~~~~~~~G~~~~~~~~g~-----------~~G~~~------~~~~~~~p~~~~~~~~   66 (248)
T 2yvl_A            4 FKEGEYVLIRFGEKKFLRKLLPKQSLSVKKSVLKFDEVIGK-----------PEGVKI------NGFEVYRPTLEEIILL   66 (248)
T ss_dssp             CCTTCEEEEEETTEEEEEECCTTCEEEETTEEEEGGGTTTC-----------CTTEEE------TTEEEECCCHHHHHHH
T ss_pred             CCCCCEEEEEeCCeEEEEEEcCCCEEecCCceEEHHHhcCC-----------CCCCEE------EEEEEeCCCHHHHHHh
Confidence            899999998762      33688888888888777764321           112221      3344444433222211


Q ss_pred             -----cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--cE
Q 019199          159 -----APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--DK  228 (344)
Q Consensus       159 -----a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~~  228 (344)
                           +.+.... .+...+... .+.++++||.+|+| .|..+..+++. +.+|++++.+++..+.+++.   .+.  ..
T Consensus        67 ~~~~~~~~~~~~-~~~~~~~~~-~~~~~~~vldiG~G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~  142 (248)
T 2yvl_A           67 GFERKTQIIYPK-DSFYIALKL-NLNKEKRVLEFGTG-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNV  142 (248)
T ss_dssp             TSCCSSCCCCHH-HHHHHHHHT-TCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTE
T ss_pred             cCcCCCCcccch-hHHHHHHhc-CCCCCCEEEEeCCC-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcE
Confidence                 1111122 222334333 44899999999998 58889999988 78999999999887777433   232  22


Q ss_pred             EEeCCCHHHHHHhcCCccEEEECCCCc-hhHHHHHHhcccCCEEEEEc
Q 019199          229 FVVSSDLEQMKALGKSLDFIIDTASGD-HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       229 ~v~~~~~~~~~~~~~~~dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .+...+........+++|+|+...+.+ ..+..+.+.|+++|+++...
T Consensus       143 ~~~~~d~~~~~~~~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~  190 (248)
T 2yvl_A          143 KFFNVDFKDAEVPEGIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLL  190 (248)
T ss_dssp             EEECSCTTTSCCCTTCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEE
T ss_pred             EEEEcChhhcccCCCcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            222222111000125699999888766 66999999999999998874

>1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1

Probab=98.95  E-value=5.8e-12  Score=117.20  Aligned_cols=182  Identities=14%  Similarity=0.116  Sum_probs=127.8

Q ss_pred             CCcccccceEEEEecCCCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecc
Q 019199           65 LVPGHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHER  144 (344)
Q Consensus        65 ~~~G~e~~G~V~~~G~~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~  144 (344)
                      ...|++.++.|.++|++++++.+|+.+++...-                     ..+.     .....|++++|+..+..
T Consensus        75 ~~~g~~a~~~i~~v~~Glds~~vGe~~Il~qvk---------------------~~~~-----~~~~~G~~~~~~~~~~~  128 (404)
T 1gpj_A           75 VKRGSEAVRHLFRVASGLESMMVGEQEILRQVK---------------------KAYD-----RAARLGTLDEALKIVFR  128 (404)
T ss_dssp             EEEHHHHHHHHHHHHTTTTSSSTTCHHHHHHHH---------------------HHHH-----HHHHHTCCCHHHHHHHH
T ss_pred             eecCchHhhhheeeccCCCCCcCCcchhHHHHH---------------------HHHH-----HHHHcCCchHHHHHHHH
Confidence            357999999999999999999999987431100                     0000     00124667888877778


Q ss_pred             eEEEcCCCCCcccccccchhhhHhHHHHHhccC---CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH
Q 019199          145 YCYKIANDYPLALAAPLLCAGITVYTPMMRHKM---NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA  220 (344)
Q Consensus       145 ~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~---~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~  220 (344)
                      .++++|++++...++. ..+..++|.++.....   -.+|++|+|+|+|.+|.++++.++..|+ +|++++++.++.+.+
T Consensus       129 ~a~~~~k~v~~~~~~~-~~~~s~a~~av~~a~~~~~~l~g~~VlIiGaG~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~l  207 (404)
T 1gpj_A          129 RAINLGKRAREETRIS-EGAVSIGSAAVELAERELGSLHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVEL  207 (404)
T ss_dssp             HHHHHHHHHHHHSSTT-CSCCSHHHHHHHHHHHHHSCCTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHH
T ss_pred             HHhhhhccCcchhhhc-CCCccHHHHHHHHHHHHhccccCCEEEEEChHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHH
Confidence            8899998887776653 3355567776644331   1589999999999999999999999999 999999998887444


Q ss_pred             HHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH--HHHHh--c--ccCCEEEEEcCC
Q 019199          221 LSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD--AYMSL--L--KVAGVYVLVGFP  277 (344)
Q Consensus       221 ~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~--~~~~~--l--~~~G~iv~~g~~  277 (344)
                      .+++|++ +++..+   +.+...++|+|+++++.+..+.  ..++.  +  ++++.++.++..
T Consensus       208 a~~~g~~-~~~~~~---l~~~l~~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia  266 (404)
T 1gpj_A          208 ARDLGGE-AVRFDE---LVDHLARSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA  266 (404)
T ss_dssp             HHHHTCE-ECCGGG---HHHHHHTCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred             HHHcCCc-eecHHh---HHHHhcCCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence            4788876 343332   2233357999999998654321  44555  4  557777777654

>1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A

Probab=98.77  E-value=4.5e-08  Score=89.58  Aligned_cols=95  Identities=15%  Similarity=0.183  Sum_probs=74.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE--EEeCCCHHHHHHhcCCccEEEECCCCchh-
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--FVVSSDLEQMKALGKSLDFIIDTASGDHP-  257 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~~~~~dvvid~~g~~~~-  257 (344)
                      +++|+|+|+|++|+++++.++.+|++|+++++++++++.+. +++++.  +++.+ .+.+.+...++|++|++++.+.. 
T Consensus       167 ~~~VlViGaGgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~-~~~~~~~~~~~DvVI~~~~~~~~~  244 (361)
T 1pjc_A          167 PGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSN-SAEIETAVAEADLLIGAVLVPGRR  244 (361)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECC-HHHHHHHHHTCSEEEECCCCTTSS
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCC-HHHHHHHHcCCCEEEECCCcCCCC
Confidence            48999999999999999999999999999999999988884 444322  33333 22333333579999999986542 


Q ss_pred             -----HHHHHHhcccCCEEEEEcCC
Q 019199          258 -----FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       258 -----~~~~~~~l~~~G~iv~~g~~  277 (344)
                           .+..++.++++|++++++..
T Consensus       245 ~~~li~~~~~~~~~~g~~ivdv~~~  269 (361)
T 1pjc_A          245 APILVPASLVEQMRTGSVIVDVAVD  269 (361)
T ss_dssp             CCCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             CCeecCHHHHhhCCCCCEEEEEecC
Confidence                 56788999999999999865

>2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A*

Probab=98.75  E-value=2.9e-08  Score=91.32  Aligned_cols=98  Identities=19%  Similarity=0.201  Sum_probs=78.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP--  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~--  257 (344)
                      +|++|+|+|+|.+|+++++.++.+|++|+++++++++++.+.+.+|+....+......+.+...++|+++++++.+.+  
T Consensus       167 ~g~~V~ViG~G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~~aDvVi~~~~~p~~~t  246 (377)
T 2vhw_A          167 EPADVVVIGAGTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVKRADLVIGAVLVPGAKA  246 (377)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHHHCSEEEECCCCTTSCC
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHcCCCEEEECCCcCCCCC
Confidence            589999999999999999999999999999999999988885557876333333333444444579999999986653  


Q ss_pred             ----HHHHHHhcccCCEEEEEcCC
Q 019199          258 ----FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g~~  277 (344)
                          ....++.++++|+++.++..
T Consensus       247 ~~li~~~~l~~mk~g~~iV~va~~  270 (377)
T 2vhw_A          247 PKLVSNSLVAHMKPGAVLVDIAID  270 (377)
T ss_dssp             CCCBCHHHHTTSCTTCEEEEGGGG
T ss_pred             cceecHHHHhcCCCCcEEEEEecC
Confidence                67889999999999999843

>2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus}

Probab=98.73  E-value=5.3e-08  Score=89.41  Aligned_cols=98  Identities=20%  Similarity=0.263  Sum_probs=77.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP--  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~--  257 (344)
                      ++++|+|+|+|.+|+.+++.++.+|++|+++++++++++.+.+.+|.....+..+.+.+.+...++|+++++++.+..  
T Consensus       165 ~~~~V~ViGaG~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~~~DvVi~~~g~~~~~~  244 (369)
T 2eez_A          165 APASVVILGGGTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQHADLLIGAVLVPGAKA  244 (369)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHHHCSEEEECCC------
T ss_pred             CCCEEEEECCCHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHhCCCEEEECCCCCcccc
Confidence            468999999999999999999999999999999999888875558876545555555555545679999999986531  


Q ss_pred             ----HHHHHHhcccCCEEEEEcCC
Q 019199          258 ----FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g~~  277 (344)
                          .+.+++.++++|+++.++..
T Consensus       245 ~~li~~~~l~~mk~gg~iV~v~~~  268 (369)
T 2eez_A          245 PKLVTRDMLSLMKEGAVIVDVAVD  268 (369)
T ss_dssp             -CCSCHHHHTTSCTTCEEEECC--
T ss_pred             chhHHHHHHHhhcCCCEEEEEecC
Confidence                57888999999999999865

>3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A*

Probab=98.64  E-value=9.3e-08  Score=90.24  Aligned_cols=106  Identities=16%  Similarity=0.173  Sum_probs=85.1

Q ss_pred             hhhHhHHHHHhcc-CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc
Q 019199          164 AGITVYTPMMRHK-MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG  242 (344)
Q Consensus       164 ~~~ta~~~l~~~~-~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~  242 (344)
                      ...++|+++.+.. ...+|++|+|+|.|.+|..+++.++.+|++|+++++++++.+.+ +++|++ ++   +.   .+..
T Consensus       256 ~~~s~~~g~~r~~~~~l~GktV~IiG~G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A-~~~Ga~-~~---~l---~e~l  327 (494)
T 3ce6_A          256 TRHSLIDGINRGTDALIGGKKVLICGYGDVGKGCAEAMKGQGARVSVTEIDPINALQA-MMEGFD-VV---TV---EEAI  327 (494)
T ss_dssp             HHHHHHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCE-EC---CH---HHHG
T ss_pred             hhhhhhHHHHhccCCCCCcCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCE-Ee---cH---HHHH
Confidence            3455677765543 24799999999999999999999999999999999999888777 578875 22   22   2233


Q ss_pred             CCccEEEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199          243 KSLDFIIDTASGDHPFD-AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       243 ~~~dvvid~~g~~~~~~-~~~~~l~~~G~iv~~g~~  277 (344)
                      .++|++++++++...+. ..++.++++|+++.+|..
T Consensus       328 ~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~  363 (494)
T 3ce6_A          328 GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF  363 (494)
T ss_dssp             GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred             hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            67999999999876565 789999999999999865

>1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A*

Probab=98.61  E-value=1.5e-07  Score=86.89  Aligned_cols=148  Identities=17%  Similarity=0.164  Sum_probs=98.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCC----------------------HH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSD----------------------LE  236 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~----------------------~~  236 (344)
                      ++++|+|+|+|.+|+.++++++.+|++|+++++++++++.+ +++|++.+ ++..+                      .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~-~~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~~  249 (384)
T 1l7d_A          171 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  249 (384)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeecccccccccccccchhhcCHHHHhhhHH
Confidence            68999999999999999999999999999999999988888 56998654 22211                      11


Q ss_pred             HHHHhcCCccEEEECC---CC--chh-HHHHHHhcccCCEEEEEcCC--Cccc--cCCceee------ee---ch-HhHH
Q 019199          237 QMKALGKSLDFIIDTA---SG--DHP-FDAYMSLLKVAGVYVLVGFP--SKVK--FSPASLN------IG---GT-KDTQ  296 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~---g~--~~~-~~~~~~~l~~~G~iv~~g~~--~~~~--~~~~~~~------~~---~~-~~~~  296 (344)
                      .+.+...++|++|+++   |.  +.. ....++.+++++.++.++..  ....  .+...+.      .+   .. ....
T Consensus       250 ~l~~~~~~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~~~~~~~~~~~~v~i~g~~~~p~~~~~  329 (384)
T 1l7d_A          250 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPLSEPGKIVVKHGVKIVGHTNVPSRVAA  329 (384)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTTCCTTCEEEETTEEEECCSSGGGGGHH
T ss_pred             HHHHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeecccCCcEEEECCEEEEEeCCCcchhHH
Confidence            2444457899999999   53  222 37889999999999999854  2211  1221221      11   11 2356


Q ss_pred             HHHHHHHhCCCcc---ceE----EEeCccHHHHHHHHHc
Q 019199          297 EMLEYCAAHKIYP---QIE----TIPIENVNEALERLIK  328 (344)
Q Consensus       297 ~~~~~~~~g~~~~---~~~----~~~~~~~~~a~~~~~~  328 (344)
                      .+.+++.++.+..   ...    .+.++.-.+.++....
T Consensus       330 ~a~~l~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~  368 (384)
T 1l7d_A          330 DASPLFAKNLLNFLTPHVDKDTKTLVMKLEDETVSGTCV  368 (384)
T ss_dssp             HHHHHHHHHHHHHHGGGEETTTTEECCCTTCHHHHHHEE
T ss_pred             HHHHHHHHhHHHHHHHHHhCCcchhhccccCHHHhcCeE
Confidence            6888888876643   221    4455545556554433

>3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium}

Probab=98.48  E-value=2.5e-07  Score=73.03  Aligned_cols=107  Identities=18%  Similarity=0.169  Sum_probs=78.8

Q ss_pred             HhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199          167 TVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d  246 (344)
                      .++.++..... ..+.+|+|+|+|.+|.+.++.++..|++|++.++++++.+.+.+++|.+. ....+..   +...++|
T Consensus         8 v~~~a~~~~~~-~~~~~v~iiG~G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~~-~~~~~~~---~~~~~~D   82 (144)
T 3oj0_A            8 IPSIVYDIVRK-NGGNKILLVGNGMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYEY-VLINDID---SLIKNND   82 (144)
T ss_dssp             HHHHHHHHHHH-HCCCEEEEECCSHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCEE-EECSCHH---HHHHTCS
T ss_pred             HHHHHHHHHHh-ccCCEEEEECCCHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCce-EeecCHH---HHhcCCC
Confidence            34566665555 56899999999999999999988889999999999998877667788543 2333322   2224699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEcCCCc
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSK  279 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~  279 (344)
                      +++++++....... ...+++++.++.++.+.+
T Consensus        83 ivi~at~~~~~~~~-~~~l~~g~~vid~~~p~~  114 (144)
T 3oj0_A           83 VIITATSSKTPIVE-ERSLMPGKLFIDLGNPPN  114 (144)
T ss_dssp             EEEECSCCSSCSBC-GGGCCTTCEEEECCSSCS
T ss_pred             EEEEeCCCCCcEee-HHHcCCCCEEEEccCCcc
Confidence            99999997642222 277889999999987633

>1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A*

Probab=98.47  E-value=4.7e-07  Score=83.83  Aligned_cols=97  Identities=24%  Similarity=0.237  Sum_probs=74.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCC-------------CHH-------HH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSS-------------DLE-------QM  238 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~-------------~~~-------~~  238 (344)
                      ++.+|+|+|+|.+|+.++++++.+|++|++++++.++++.+ +++|++.+. +..             ..+       .+
T Consensus       171 ~g~~V~ViGaG~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~-~~lGa~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~l  249 (401)
T 1x13_A          171 PPAKVMVIGAGVAGLAAIGAANSLGAIVRAFDTRPEVKEQV-QSMGAEFLELDFKEEAGSGDGYAKVMSDAFIKAEMELF  249 (401)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCGGGHHHH-HHTTCEECCC--------CCHHHHHHSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCEEEEecccccccccccchhhccHHHHHHHHHHH
Confidence            58999999999999999999999999999999999998888 688976542 111             111       23


Q ss_pred             HHhcCCccEEEECCCCc-----hh-HHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGD-----HP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~-----~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+...++|++|++++.+     .. ....++.+++++.++.++..
T Consensus       250 ~e~~~~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~  294 (401)
T 1x13_A          250 AAQAKEVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQ  294 (401)
T ss_dssp             HHHHHHCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHHhCCCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCC
Confidence            34445799999995321     22 36889999999999999854

>3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str}

Probab=98.34  E-value=1.5e-06  Score=78.94  Aligned_cols=97  Identities=20%  Similarity=0.160  Sum_probs=75.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC---------C----------CHHHHHH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS---------S----------DLEQMKA  240 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~---------~----------~~~~~~~  240 (344)
                      ++.+|+|+|+|.+|+.+++.++.+|++|++.+++.++++.+ +++|++.+...         .          ....+.+
T Consensus       183 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~e  261 (381)
T 3p2y_A          183 KPASALVLGVGVAGLQALATAKRLGAKTTGYDVRPEVAEQV-RSVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALED  261 (381)
T ss_dssp             CCCEEEEESCSHHHHHHHHHHHHHTCEEEEECSSGGGHHHH-HHTTCEECCCC-------------CHHHHHHHHHHHHH
T ss_pred             CCCEEEEECchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHcCCeEEeccccccccccchhhhhHHHHhhhHHHHHH
Confidence            67999999999999999999999999999999999999888 57887542100         0          0122334


Q ss_pred             hcCCccEEEECCCCc-----h-hHHHHHHhcccCCEEEEEcCC
Q 019199          241 LGKSLDFIIDTASGD-----H-PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       241 ~~~~~dvvid~~g~~-----~-~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...++|+||.++..+     . ..+..++.+++++.+++++..
T Consensus       262 ~l~~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d  304 (381)
T 3p2y_A          262 AITKFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGE  304 (381)
T ss_dssp             HHTTCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGG
T ss_pred             HHhcCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCC
Confidence            457899999986322     1 247899999999999999754

>4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti}

Probab=98.31  E-value=2.4e-06  Score=78.35  Aligned_cols=97  Identities=22%  Similarity=0.230  Sum_probs=74.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe-------------CCC----------HH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV-------------SSD----------LE  236 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~-------------~~~----------~~  236 (344)
                      ++.+|+|+|+|.+|+.++++++.+|++|++.++++++++.+ +++|++.+..             +..          ..
T Consensus       189 ~~~kV~ViG~G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~-~~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~~  267 (405)
T 4dio_A          189 PAAKIFVMGAGVAGLQAIATARRLGAVVSATDVRPAAKEQV-ASLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQAA  267 (405)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSTTHHHHH-HHTTCEECCCCC-----------------CHHHHHHHH
T ss_pred             CCCEEEEECCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHcCCceeecccccccccccccchhhhcchhhhhhhHh
Confidence            67999999999999999999999999999999999999888 5788753211             100          11


Q ss_pred             HHHHhcCCccEEEECCCCc-----h-hHHHHHHhcccCCEEEEEcCC
Q 019199          237 QMKALGKSLDFIIDTASGD-----H-PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~g~~-----~-~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+.+...++|++|.++..+     . ..+.+++.+++++.+++++..
T Consensus       268 ~l~e~l~~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d  314 (405)
T 4dio_A          268 LVAEHIAKQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVE  314 (405)
T ss_dssp             HHHHHHHTCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHhcCCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCC
Confidence            2333447899999986422     1 357899999999999999753

>3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi}

Probab=98.21  E-value=1.2e-05  Score=60.41  Aligned_cols=94  Identities=17%  Similarity=0.097  Sum_probs=69.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      .+.+++|+|+|.+|..+++.+...| .+|+++++++++.+.+ ...+... ..+..+.+.+.+...++|++|++++....
T Consensus         4 ~~~~v~I~G~G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~-~~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~~~~~~~   82 (118)
T 3ic5_A            4 MRWNICVVGAGKIGQMIAALLKTSSNYSVTVADHDLAALAVL-NRMGVATKQVDAKDEAGLAKALGGFDAVISAAPFFLT   82 (118)
T ss_dssp             TCEEEEEECCSHHHHHHHHHHHHCSSEEEEEEESCHHHHHHH-HTTTCEEEECCTTCHHHHHHHTTTCSEEEECSCGGGH
T ss_pred             CcCeEEEECCCHHHHHHHHHHHhCCCceEEEEeCCHHHHHHH-HhCCCcEEEecCCCHHHHHHHHcCCCEEEECCCchhh
Confidence            4568999999999999999999999 6999999999888777 3556443 34555666666666789999999986653


Q ss_pred             HHHHHHhcccCCEEEEE
Q 019199          258 FDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~  274 (344)
                      ...+..+.+.+-+++.+
T Consensus        83 ~~~~~~~~~~g~~~~~~   99 (118)
T 3ic5_A           83 PIIAKAAKAAGAHYFDL   99 (118)
T ss_dssp             HHHHHHHHHTTCEEECC
T ss_pred             HHHHHHHHHhCCCEEEe
Confidence            44444444555555544

>2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A*

Probab=98.14  E-value=7e-06  Score=65.44  Aligned_cols=96  Identities=16%  Similarity=0.143  Sum_probs=69.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHh-cCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKAL-GKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~dvvid~~g~~~  256 (344)
                      .++.+|+|+|+|.+|..+++.++..|.+|+++++++++.+.+.+..|...+. +..+.+.+.+. ..++|++|.+++...
T Consensus        17 ~~~~~v~IiG~G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~~~~~d~~~~~~l~~~~~~~ad~Vi~~~~~~~   96 (155)
T 2g1u_A           17 QKSKYIVIFGCGRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGFTVVGDAAEFETLKECGMEKADMVFAFTNDDS   96 (155)
T ss_dssp             CCCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSEEEESCTTSHHHHHTTTGGGCSEEEECSSCHH
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCcEEEecCCCHHHHHHcCcccCCEEEEEeCCcH
Confidence            6788999999999999999999999999999999998887662156655332 23344555544 367999999999876


Q ss_pred             hHHHHHHhccc-C--CEEEEE
Q 019199          257 PFDAYMSLLKV-A--GVYVLV  274 (344)
Q Consensus       257 ~~~~~~~~l~~-~--G~iv~~  274 (344)
                      ....+...++. +  .+++..
T Consensus        97 ~~~~~~~~~~~~~~~~~iv~~  117 (155)
T 2g1u_A           97 TNFFISMNARYMFNVENVIAR  117 (155)
T ss_dssp             HHHHHHHHHHHTSCCSEEEEE
T ss_pred             HHHHHHHHHHHHCCCCeEEEE
Confidence            44555455444 3  355444

>3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans}

Probab=98.12  E-value=2.8e-05  Score=68.78  Aligned_cols=94  Identities=16%  Similarity=0.158  Sum_probs=74.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|+|+|.|.+|.++++.++.+|++|++.+++.++.+.+ +++|+.. ++..   .+.+...+.|+++.+++....-
T Consensus       153 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~-~~~~---~l~~~l~~aDvVi~~~p~~~i~  227 (293)
T 3d4o_A          153 IHGANVAVLGLGRVGMSVARKFAALGAKVKVGARESDLLARI-AEMGMEP-FHIS---KAAQELRDVDVCINTIPALVVT  227 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTSEE-EEGG---GHHHHTTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHhCCCEEEEEECCHHHHHHH-HHCCCee-cChh---hHHHHhcCCCEEEECCChHHhC
Confidence            578999999999999999999999999999999998877666 4678653 3322   2334456799999999764433


Q ss_pred             HHHHHhcccCCEEEEEcCC
Q 019199          259 DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...++.+++++.++.++..
T Consensus       228 ~~~l~~mk~~~~lin~ar~  246 (293)
T 3d4o_A          228 ANVLAEMPSHTFVIDLASK  246 (293)
T ss_dssp             HHHHHHSCTTCEEEECSST
T ss_pred             HHHHHhcCCCCEEEEecCC
Confidence            5678889999999999753

>3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A*

Probab=98.10  E-value=1.7e-05  Score=73.01  Aligned_cols=101  Identities=20%  Similarity=0.222  Sum_probs=78.7

Q ss_pred             HHHHHhcc-CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRHK-MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~~-~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+.. ..-.|++|+|+|.|.+|..+++.++.+|++|+++++++.+...+ ...|... .   +   +.+...+.|+
T Consensus       207 ~~gi~rat~~~L~GktV~ViG~G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A-~~~G~~v-~---~---Leeal~~ADI  278 (435)
T 3gvp_A          207 LDGLKRTTDMMFGGKQVVVCGYGEVGKGCCAALKAMGSIVYVTEIDPICALQA-CMDGFRL-V---K---LNEVIRQVDI  278 (435)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-C---C---HHHHTTTCSE
T ss_pred             HHHHHHhhCceecCCEEEEEeeCHHHHHHHHHHHHCCCEEEEEeCChhhhHHH-HHcCCEe-c---c---HHHHHhcCCE
Confidence            45555543 33589999999999999999999999999999999888766555 4566432 1   1   3344567999


Q ss_pred             EEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHPFD-AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~  277 (344)
                      ++.|.++...+. ..++.+++++.++.+|..
T Consensus       279 Vi~atgt~~lI~~e~l~~MK~gailINvgrg  309 (435)
T 3gvp_A          279 VITCTGNKNVVTREHLDRMKNSCIVCNMGHS  309 (435)
T ss_dssp             EEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred             EEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence            999988766555 889999999999999865

>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}

Probab=98.08  E-value=2.5e-05  Score=68.20  Aligned_cols=99  Identities=22%  Similarity=0.269  Sum_probs=75.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+++|...   ..|-.+++.++++       -+++|+
T Consensus        27 L~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDi  106 (273)
T 4fgs_A           27 LNAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDV  106 (273)
T ss_dssp             TTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEE
T ss_pred             hCCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            46889999998 899999999999999999999999999888878887432   2355555544332       268999


Q ss_pred             EEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++++.|..                         ...+.++..++++|+||.++..
T Consensus       107 LVNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~  161 (273)
T 4fgs_A          107 LFVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGST  161 (273)
T ss_dssp             EEECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             EEECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeeh
Confidence            99998753                         2234555668888999999765

>3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633}

Probab=98.06  E-value=4e-05  Score=62.68  Aligned_cols=95  Identities=9%  Similarity=0.096  Sum_probs=71.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHh--cCCccEEEECCCCc
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKAL--GKSLDFIIDTASGD  255 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~--~~~~dvvid~~g~~  255 (344)
                      .+++++|+|+|.+|..+++.++.. |.+|+++++++++.+.+ ++.|...+. |..+.+.+.+.  ..++|+++.+++..
T Consensus        38 ~~~~v~IiG~G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~-~~~g~~~~~gd~~~~~~l~~~~~~~~ad~vi~~~~~~  116 (183)
T 3c85_A           38 GHAQVLILGMGRIGTGAYDELRARYGKISLGIEIREEAAQQH-RSEGRNVISGDATDPDFWERILDTGHVKLVLLAMPHH  116 (183)
T ss_dssp             TTCSEEEECCSHHHHHHHHHHHHHHCSCEEEEESCHHHHHHH-HHTTCCEEECCTTCHHHHHTBCSCCCCCEEEECCSSH
T ss_pred             CCCcEEEECCCHHHHHHHHHHHhccCCeEEEEECCHHHHHHH-HHCCCCEEEcCCCCHHHHHhccCCCCCCEEEEeCCCh
Confidence            366899999999999999999998 99999999999988887 577876543 55566666666  46899999999876


Q ss_pred             hhHHHHHHh---cccCCEEEEEc
Q 019199          256 HPFDAYMSL---LKVAGVYVLVG  275 (344)
Q Consensus       256 ~~~~~~~~~---l~~~G~iv~~g  275 (344)
                      .....+...   +.+..+++...
T Consensus       117 ~~~~~~~~~~~~~~~~~~ii~~~  139 (183)
T 3c85_A          117 QGNQTALEQLQRRNYKGQIAAIA  139 (183)
T ss_dssp             HHHHHHHHHHHHTTCCSEEEEEE
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEE
Confidence            544344334   44455776553

>1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33

Probab=98.06  E-value=2.5e-06  Score=74.47  Aligned_cols=95  Identities=19%  Similarity=0.184  Sum_probs=68.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      .++.+||.+|+|. |..+..+++.. +.+|++++.+++..+.+.+.......+..+. ..+....+.+|+|+.... ...
T Consensus        84 ~~~~~vLdiG~G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~-~~~~~~~~~fD~v~~~~~-~~~  160 (269)
T 1p91_A           84 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYA-PCK  160 (269)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESC-CCC
T ss_pred             CCCCEEEEECCCC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHhCCCcEEEEcch-hhCCCCCCceeEEEEeCC-hhh
Confidence            6788999999987 88889999886 7799999999999888854443222222221 111111256999996444 445


Q ss_pred             HHHHHHhcccCCEEEEEcC
Q 019199          258 FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~  276 (344)
                      +..+.+.|+|+|+++....
T Consensus       161 l~~~~~~L~pgG~l~~~~~  179 (269)
T 1p91_A          161 AEELARVVKPGGWVITATP  179 (269)
T ss_dssp             HHHHHHHEEEEEEEEEEEE
T ss_pred             HHHHHHhcCCCcEEEEEEc
Confidence            9999999999999987753

>1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13

Probab=98.03  E-value=2.7e-05  Score=68.23  Aligned_cols=98  Identities=18%  Similarity=0.167  Sum_probs=69.6

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHHHHHh-cCCcc
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQMKAL-GKSLD  246 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~~~~~-~~~~d  246 (344)
                      ...+.++++||.+|+|. |..++.+++..  +.+|+.++.+++..+.+++.   .|.  ...+...+....  . .+.+|
T Consensus       107 ~~~~~~~~~VLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~--~~~~~~D  183 (277)
T 1o54_A          107 MLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDISEG--FDEKDVD  183 (277)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGGGC--CSCCSEE
T ss_pred             HhCCCCCCEEEEECCcC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHc--ccCCccC
Confidence            33458999999999976 88888999886  45999999998877766433   243  222222222111  2 24699


Q ss_pred             EEEECCCCc-hhHHHHHHhcccCCEEEEEc
Q 019199          247 FIIDTASGD-HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       247 vvid~~g~~-~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +|+.....+ ..+..+.+.|+++|+++...
T Consensus       184 ~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~  213 (277)
T 1o54_A          184 ALFLDVPDPWNYIDKCWEALKGGGRFATVC  213 (277)
T ss_dssp             EEEECCSCGGGTHHHHHHHEEEEEEEEEEE
T ss_pred             EEEECCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            999776654 56889999999999998874

>2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis}

Probab=97.99  E-value=3.5e-05  Score=68.42  Aligned_cols=94  Identities=20%  Similarity=0.209  Sum_probs=74.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|+|+|+|.+|..+++.++.+|++|++.+++.++.+.+ +++|.. .++..   .+.+...++|+|+.+++....-
T Consensus       155 l~g~~v~IiG~G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~-~~~~~---~l~~~l~~aDvVi~~~p~~~i~  229 (300)
T 2rir_A          155 IHGSQVAVLGLGRTGMTIARTFAALGANVKVGARSSAHLARI-TEMGLV-PFHTD---ELKEHVKDIDICINTIPSMILN  229 (300)
T ss_dssp             STTSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCE-EEEGG---GHHHHSTTCSEEEECCSSCCBC
T ss_pred             CCCCEEEEEcccHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHCCCe-EEchh---hHHHHhhCCCEEEECCChhhhC
Confidence            578999999999999999999999999999999998877666 467764 33322   2344557899999999865433


Q ss_pred             HHHHHhcccCCEEEEEcCC
Q 019199          259 DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...++.+++++.++.++..
T Consensus       230 ~~~~~~mk~g~~lin~a~g  248 (300)
T 2rir_A          230 QTVLSSMTPKTLILDLASR  248 (300)
T ss_dssp             HHHHTTSCTTCEEEECSST
T ss_pred             HHHHHhCCCCCEEEEEeCC
Confidence            5678889999999999754

>3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A*

Probab=97.97  E-value=4.4e-05  Score=67.09  Aligned_cols=99  Identities=16%  Similarity=0.286  Sum_probs=73.1

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEEE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ..+++|++||.+|+|+.++.++.+++..|++|++++.+++..+.+++.   .|.+  .++..+..+ +.  ...||+|+.
T Consensus       118 a~l~~g~rVLDIGcG~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~v~~v~gDa~~-l~--d~~FDvV~~  194 (298)
T 3fpf_A          118 GRFRRGERAVFIGGGPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDGVNVITGDETV-ID--GLEFDVLMV  194 (298)
T ss_dssp             TTCCTTCEEEEECCCSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCSEEEEESCGGG-GG--GCCCSEEEE
T ss_pred             cCCCCcCEEEEECCCccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEECchhh-CC--CCCcCEEEE
Confidence            456899999999998878888888888899999999999988777443   2431  222222222 11  467999997


Q ss_pred             CCCCc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          251 TASGD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 ~~g~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ....+   ..++.+.+.|+|+|+++.....
T Consensus       195 ~a~~~d~~~~l~el~r~LkPGG~Lvv~~~~  224 (298)
T 3fpf_A          195 AALAEPKRRVFRNIHRYVDTETRIIYRTYT  224 (298)
T ss_dssp             CTTCSCHHHHHHHHHHHCCTTCEEEEEECC
T ss_pred             CCCccCHHHHHHHHHHHcCCCcEEEEEcCc
Confidence            65543   4588999999999999977543

>3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12}

Probab=97.96  E-value=0.00013  Score=56.83  Aligned_cols=97  Identities=14%  Similarity=0.084  Sum_probs=73.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~  256 (344)
                      ...++++|+|.|.+|..+++.++..|.+|+++++++++.+.+ ++.|...+. |..+++.+.+.. .++|+++-+++...
T Consensus         5 ~~~~~viIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~~-~~~g~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~~~   83 (140)
T 3fwz_A            5 DICNHALLVGYGRVGSLLGEKLLASDIPLVVIETSRTRVDEL-RERGVRAVLGNAANEEIMQLAHLECAKWLILTIPNGY   83 (140)
T ss_dssp             CCCSCEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHTTCEEEESCTTSHHHHHHTTGGGCSEEEECCSCHH
T ss_pred             cCCCCEEEECcCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HHcCCCEEECCCCCHHHHHhcCcccCCEEEEECCChH
Confidence            345679999999999999999999999999999999999888 467875443 445666666653 67999999998764


Q ss_pred             hH---HHHHHhcccCCEEEEEcC
Q 019199          257 PF---DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 ~~---~~~~~~l~~~G~iv~~g~  276 (344)
                      .-   ....+.+.+..+++....
T Consensus        84 ~n~~~~~~a~~~~~~~~iiar~~  106 (140)
T 3fwz_A           84 EAGEIVASARAKNPDIEIIARAH  106 (140)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEEES
T ss_pred             HHHHHHHHHHHHCCCCeEEEEEC
Confidence            22   234455667777776543

>3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus}

Probab=97.96  E-value=4.5e-05  Score=70.30  Aligned_cols=101  Identities=18%  Similarity=0.175  Sum_probs=77.0

Q ss_pred             HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+. +..-.|++|+|+|.|.+|..+++.++.+|++|++++.++.+...+ ...|... +   +   +.+.....|+
T Consensus       234 vdgI~Ratg~~L~GKTVgVIG~G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A-~~~G~~v-v---~---LeElL~~ADI  305 (464)
T 3n58_A          234 VDGIRRGTDVMMAGKVAVVCGYGDVGKGSAQSLAGAGARVKVTEVDPICALQA-AMDGFEV-V---T---LDDAASTADI  305 (464)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEE-C---C---HHHHGGGCSE
T ss_pred             HHHHHHhcCCcccCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCcchhhHH-HhcCcee-c---c---HHHHHhhCCE
Confidence            4444443 334689999999999999999999999999999999887765555 3556542 2   1   2334467999


Q ss_pred             EEECCCCchhH-HHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHPF-DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~~-~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++.+.++...+ ...++.+++++.++.+|-.
T Consensus       306 Vv~atgt~~lI~~e~l~~MK~GAILINvGRg  336 (464)
T 3n58_A          306 VVTTTGNKDVITIDHMRKMKDMCIVGNIGHF  336 (464)
T ss_dssp             EEECCSSSSSBCHHHHHHSCTTEEEEECSSS
T ss_pred             EEECCCCccccCHHHHhcCCCCeEEEEcCCC
Confidence            99999876544 6889999999999998854

>3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A*

Probab=97.84  E-value=3e-05  Score=72.56  Aligned_cols=91  Identities=20%  Similarity=0.201  Sum_probs=71.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|++++|+|+|++|.+.++.++..|++|+++++++.+...+ ...|++. .   +.   .+....+|+++++.|....+
T Consensus       263 L~GKtVvVtGaGgIG~aiA~~Laa~GA~Viv~D~~~~~a~~A-a~~g~dv-~---~l---ee~~~~aDvVi~atG~~~vl  334 (488)
T 3ond_A          263 IAGKVAVVAGYGDVGKGCAAALKQAGARVIVTEIDPICALQA-TMEGLQV-L---TL---EDVVSEADIFVTTTGNKDII  334 (488)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE-C---CG---GGTTTTCSEEEECSSCSCSB
T ss_pred             ccCCEEEEECCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHH-HHhCCcc-C---CH---HHHHHhcCEEEeCCCChhhh
Confidence            479999999999999999999999999999999988877766 3556531 1   11   22345799999999976555


Q ss_pred             H-HHHHhcccCCEEEEEcCC
Q 019199          259 D-AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~-~~~~~l~~~G~iv~~g~~  277 (344)
                      . ..++.+++++.++..|..
T Consensus       335 ~~e~l~~mk~gaiVvNaG~~  354 (488)
T 3ond_A          335 MLDHMKKMKNNAIVCNIGHF  354 (488)
T ss_dssp             CHHHHTTSCTTEEEEESSST
T ss_pred             hHHHHHhcCCCeEEEEcCCC
Confidence            3 488999999999988853

>4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A

Probab=97.81  E-value=0.00016  Score=62.49  Aligned_cols=99  Identities=20%  Similarity=0.189  Sum_probs=71.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|+
T Consensus         6 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (255)
T 4eso_A            6 YQGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTLGAIDL   85 (255)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSSEEE
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHhCCCCE
Confidence            35789999998 999999999998999999999999998877766666432   2344555444332       268999


Q ss_pred             EEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++++.|...                         ..+.++..++++|+|+.++..
T Consensus        86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  140 (255)
T 4eso_A           86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSV  140 (255)
T ss_dssp             EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECCh
Confidence            999887421                         123344455668999999765

>3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus}

Probab=97.70  E-value=0.00028  Score=54.90  Aligned_cols=75  Identities=24%  Similarity=0.178  Sum_probs=60.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCch
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDH  256 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~  256 (344)
                      ..+++|+|+|.+|..+++.+...|.+|+++++++++.+.+ ++.|...+. |..+++.+.+.. .++|+++.+++...
T Consensus         6 ~~~v~I~G~G~iG~~la~~L~~~g~~V~~id~~~~~~~~~-~~~~~~~~~gd~~~~~~l~~~~~~~~d~vi~~~~~~~   82 (141)
T 3llv_A            6 RYEYIVIGSEAAGVGLVRELTAAGKKVLAVDKSKEKIELL-EDEGFDAVIADPTDESFYRSLDLEGVSAVLITGSDDE   82 (141)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCEEEEESCHHHHHHH-HHTTCEEEECCTTCHHHHHHSCCTTCSEEEECCSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHCCCcEEECCCCCHHHHHhCCcccCCEEEEecCCHH
Confidence            4579999999999999999999999999999999988887 456754332 455666666654 67999999999654

>3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A*

Probab=97.70  E-value=0.00043  Score=59.40  Aligned_cols=74  Identities=14%  Similarity=0.075  Sum_probs=55.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      +++|||+|+ +++|.+.++.+...|++|+++++++++.+.+.++.+..  ...|-.+++.++++       -+++|++++
T Consensus         2 nK~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN   81 (247)
T 3ged_A            2 NRGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFAKERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN   81 (247)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            368999987 89999999999999999999999999888775554422  22345555544332       268999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        82 NAG~   85 (247)
T 3ged_A           82 NACR   85 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8874

>2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13

Probab=97.65  E-value=0.00016  Score=65.23  Aligned_cols=100  Identities=17%  Similarity=0.203  Sum_probs=65.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhCC---------------Cc-EEEeCCCHHHH
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLG---------------AD-KFVVSSDLEQM  238 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~g---------------~~-~~v~~~~~~~~  238 (344)
                      .+.+|++||-+|+|. |..++.+++..|  .+|+.++.+++..+.+++.+.               .. .++..+-.+..
T Consensus       102 ~~~~g~~VLDiG~G~-G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~d~~~~~  180 (336)
T 2b25_A          102 DINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISGAT  180 (336)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTCCC
T ss_pred             CCCCCCEEEEeCCCc-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEECChHHcc
Confidence            458999999999876 788888888766  589999999887766643221               11 12222211111


Q ss_pred             HHh-cCCccEEEECCCCc-hhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KAL-GKSLDFIIDTASGD-HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~-~~~~dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ... .+.+|+|+-....+ ..+..+.+.|+|+|+++.....
T Consensus       181 ~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  221 (336)
T 2b25_A          181 EDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVN  221 (336)
T ss_dssp             -------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred             cccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeCC
Confidence            111 24599988655544 3488999999999999977543

>2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A*

Probab=97.62  E-value=0.00019  Score=55.67  Aligned_cols=74  Identities=19%  Similarity=0.333  Sum_probs=56.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHh-cCCccEEEECCCCc
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKAL-GKSLDFIIDTASGD  255 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~dvvid~~g~~  255 (344)
                      +++++|+|+|.+|...++.+...|.+|+++++++++.+.+ ++.+...+. +..+.+.+.+. ..++|+++.+++..
T Consensus         6 ~~~v~I~G~G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~-~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~   81 (144)
T 2hmt_A            6 NKQFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGAN   81 (144)
T ss_dssp             CCSEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHTT-TTTCSEEEECCTTCHHHHHTTTGGGCSEEEECCCSC
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHH-HHhCCEEEEeCCCCHHHHHhcCCCCCCEEEECCCCc
Confidence            4679999999999999999999999999999988877665 345554322 34455555554 36799999999975

>4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1}

Probab=97.59  E-value=0.00014  Score=62.21  Aligned_cols=97  Identities=16%  Similarity=0.153  Sum_probs=68.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHh---cCCccEEEECCCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKAL---GKSLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~---~~~~dvvid~~g~  254 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++... .-.. ....|-.+++.++++   -+++|+++++.|.
T Consensus        10 ~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~g~iDiLVNNAGi   88 (242)
T 4b79_A           10 AGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDSQRLQRLFEALPRLDVLVNNAGI   88 (242)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCHHHHHHHHHhcCCCCEEEECCCC
Confidence            5899999997 89999999999999999999999987665331 1111 223455666555443   3679999999884


Q ss_pred             c-----------------------hhHHHHHHhc-ccCCEEEEEcCC
Q 019199          255 D-----------------------HPFDAYMSLL-KVAGVYVLVGFP  277 (344)
Q Consensus       255 ~-----------------------~~~~~~~~~l-~~~G~iv~~g~~  277 (344)
                      .                       ...+.++..+ +.+|+||.++..
T Consensus        89 ~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  135 (242)
T 4b79_A           89 SRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASM  135 (242)
T ss_dssp             CCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCG
T ss_pred             CCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeec
Confidence            2                       1122344445 357999999765

>3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A*

Probab=97.59  E-value=0.00022  Score=65.74  Aligned_cols=101  Identities=16%  Similarity=0.232  Sum_probs=75.6

Q ss_pred             HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+. ...-.|.+|.|+|.|.+|...++.++.+|++|+++++++.+...+ ...|....       .+.+...+.|+
T Consensus       198 ldgi~ratg~~L~GktVgIiG~G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A-~~~G~~~~-------sL~eal~~ADV  269 (436)
T 3h9u_A          198 VDGIKRATDVMIAGKTACVCGYGDVGKGCAAALRGFGARVVVTEVDPINALQA-AMEGYQVL-------LVEDVVEEAHI  269 (436)
T ss_dssp             HHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-------CHHHHTTTCSE
T ss_pred             HHHHHHhcCCcccCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCChhhhHHH-HHhCCeec-------CHHHHHhhCCE
Confidence            4444443 333469999999999999999999999999999999988776655 45675321       23445567999


Q ss_pred             EEECCCCchhHH-HHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHPFD-AYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~~~-~~~~~l~~~G~iv~~g~~  277 (344)
                      ++.+.++...+. ..++.++++..++.+|-.
T Consensus       270 Vilt~gt~~iI~~e~l~~MK~gAIVINvgRg  300 (436)
T 3h9u_A          270 FVTTTGNDDIITSEHFPRMRDDAIVCNIGHF  300 (436)
T ss_dssp             EEECSSCSCSBCTTTGGGCCTTEEEEECSSS
T ss_pred             EEECCCCcCccCHHHHhhcCCCcEEEEeCCC
Confidence            999888654343 678889999999988743

>3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A

Probab=97.59  E-value=0.00084  Score=58.31  Aligned_cols=76  Identities=29%  Similarity=0.366  Sum_probs=58.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE---EeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---VVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++....   .|-.+.+.+.+.       .+++|+
T Consensus        25 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (266)
T 3grp_A           25 LTGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDI  104 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCE
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999987 9999999999999999999999999888777667775432   244555444332       268999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus       105 lvnnAg~  111 (266)
T 3grp_A          105 LVNNAGI  111 (266)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999984

>4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius}

Probab=97.59  E-value=0.00053  Score=59.10  Aligned_cols=74  Identities=15%  Similarity=0.153  Sum_probs=56.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++   .|.+.   ..|-.+++.++++       -+++
T Consensus         6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i   85 (254)
T 4fn4_A            6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI   85 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999997 8999999998889999999999999877655443   45432   2355565544432       2689


Q ss_pred             cEEEECCC
Q 019199          246 DFIIDTAS  253 (344)
Q Consensus       246 dvvid~~g  253 (344)
                      |+++++.|
T Consensus        86 DiLVNNAG   93 (254)
T 4fn4_A           86 DVLCNNAG   93 (254)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCc
Confidence            99999987

>3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A*

Probab=97.58  E-value=0.0014  Score=55.88  Aligned_cols=75  Identities=20%  Similarity=0.221  Sum_probs=56.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE--EeCCCHHHHHHhc---CCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKALG---KSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~~---~~~dvvid~~g  253 (344)
                      ++.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++......  .|..+.+.+.+..   +++|++|++.|
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 3d3w_A            6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECCC
T ss_pred             CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            5788999998 9999999999999999999999998877666455432222  3555665555442   46899999987


Q ss_pred             C
Q 019199          254 G  254 (344)
Q Consensus       254 ~  254 (344)
                      .
T Consensus        86 ~   86 (244)
T 3d3w_A           86 V   86 (244)
T ss_dssp             C
T ss_pred             c
Confidence            4

>4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A

Probab=97.58  E-value=0.00095  Score=57.62  Aligned_cols=75  Identities=19%  Similarity=0.259  Sum_probs=57.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++++...   ..|-.+.+.+.+.       .+++|++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   86 (259)
T 4e6p_A            7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHAGGLDIL   86 (259)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHSSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5688999998 999999999998899999999999988877766666432   2355555544332       2589999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        87 v~~Ag~   92 (259)
T 4e6p_A           87 VNNAAL   92 (259)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli}

Probab=97.57  E-value=0.00089  Score=58.50  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=58.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|+
T Consensus        25 l~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  104 (277)
T 4dqx_A           25 LNQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDV  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999998 999999999998999999999999988877766666432   2355555444332       257999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus       105 lv~nAg~  111 (277)
T 4dqx_A          105 LVNNAGF  111 (277)
T ss_dssp             EEECCCC
T ss_pred             EEECCCc
Confidence            9999883

>4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix}

Probab=97.57  E-value=0.00036  Score=59.21  Aligned_cols=96  Identities=11%  Similarity=0.157  Sum_probs=67.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCC----cEEE-eCCCHHHHHHhcCCccEEEE
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGA----DKFV-VSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~----~~~v-~~~~~~~~~~~~~~~dvvid  250 (344)
                      ++||++||-+|+|+ |..+..+++..|.  +|++++-+++..+.+.+....    ..+. +..+++........+|++|.
T Consensus        75 ikpG~~VldlG~G~-G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~~p~~~~~~~~~vDvVf~  153 (233)
T 4df3_A           75 VKEGDRILYLGIAS-GTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDARFPEKYRHLVEGVDGLYA  153 (233)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCEEEEecCcC-CHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEeccCccccccccceEEEEEE
Confidence            59999999999864 8889999998875  899999999988777544431    2222 22223332223367999887


Q ss_pred             CCCCch----hHHHHHHhcccCCEEEEE
Q 019199          251 TASGDH----PFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~~~----~~~~~~~~l~~~G~iv~~  274 (344)
                      ....+.    .+.++.+.|+|+|+++..
T Consensus       154 d~~~~~~~~~~l~~~~r~LKpGG~lvI~  181 (233)
T 4df3_A          154 DVAQPEQAAIVVRNARFFLRDGGYMLMA  181 (233)
T ss_dssp             CCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eccCChhHHHHHHHHHHhccCCCEEEEE
Confidence            665542    366777889999999875

>3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus}

Probab=97.56  E-value=0.00066  Score=56.45  Aligned_cols=114  Identities=16%  Similarity=0.152  Sum_probs=77.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      .+.++++||-+|+|. |..++.+++. +.+|++++.+++..+.+++.   .|..   .++..+..+.+.. ...+|+|+.
T Consensus        52 ~~~~~~~vLDlGcG~-G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~-~~~~D~v~~  128 (204)
T 3njr_A           52 APRRGELLWDIGGGS-GSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTAPAALAD-LPLPEAVFI  128 (204)
T ss_dssp             CCCTTCEEEEETCTT-CHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCTTGGGTT-SCCCSEEEE
T ss_pred             CCCCCCEEEEecCCC-CHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCchhhhccc-CCCCCEEEE
Confidence            348899999999975 8888888887 88999999999987766433   3432   2333332221111 246999987


Q ss_pred             CCCCch-hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          251 TASGDH-PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       251 ~~g~~~-~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                      ..+... .++.+.+.|+|+|+++.....              .+.+.++.+++.+..+
T Consensus       129 ~~~~~~~~l~~~~~~LkpgG~lv~~~~~--------------~~~~~~~~~~l~~~g~  172 (204)
T 3njr_A          129 GGGGSQALYDRLWEWLAPGTRIVANAVT--------------LESETLLTQLHARHGG  172 (204)
T ss_dssp             CSCCCHHHHHHHHHHSCTTCEEEEEECS--------------HHHHHHHHHHHHHHCS
T ss_pred             CCcccHHHHHHHHHhcCCCcEEEEEecC--------------cccHHHHHHHHHhCCC
Confidence            654332 588899999999999887433              2345566666655433

>4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp}

Probab=97.56  E-value=0.00095  Score=57.54  Aligned_cols=98  Identities=21%  Similarity=0.199  Sum_probs=68.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcEE---EeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF---VVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~-------~~~~  245 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++.+++++++++..++   .|.+..   .|-.+++.++++       -+++
T Consensus         8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   87 (255)
T 4g81_D            8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV   87 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            6788999987 8999999999999999999999998876554333   354332   244455444332       3689


Q ss_pred             cEEEECCCCc-------------------------hhHHHHHHhc---ccCCEEEEEcCC
Q 019199          246 DFIIDTASGD-------------------------HPFDAYMSLL---KVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~-------------------------~~~~~~~~~l---~~~G~iv~~g~~  277 (344)
                      |+++++.|..                         ...+.++..+   ..+|+||.++..
T Consensus        88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~  147 (255)
T 4g81_D           88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSL  147 (255)
T ss_dssp             CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCG
T ss_pred             cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeeh
Confidence            9999998842                         1233445545   246999999765

>3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis}

Probab=97.56  E-value=0.00063  Score=59.51  Aligned_cols=75  Identities=23%  Similarity=0.207  Sum_probs=57.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++++..   ...|-.+.+.+.+.       .+++|++
T Consensus        28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  107 (277)
T 3gvc_A           28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL  107 (277)
T ss_dssp             TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999987 99999999998889999999999998887776666632   22355565544332       2689999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus       108 vnnAg~  113 (277)
T 3gvc_A          108 VANAGV  113 (277)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti}

Probab=97.54  E-value=0.00042  Score=60.77  Aligned_cols=75  Identities=23%  Similarity=0.239  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++    +..   ...|-.+.+.+.+.       .++
T Consensus        32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  111 (281)
T 4dry_A           32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEFAR  111 (281)
T ss_dssp             --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999997 99999999999889999999999988766554443    211   22355565544332       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       112 iD~lvnnAG~  121 (281)
T 4dry_A          112 LDLLVNNAGS  121 (281)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A

Probab=97.54  E-value=0.00094  Score=57.65  Aligned_cols=98  Identities=12%  Similarity=0.132  Sum_probs=67.0

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCC-c---EEEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGA-D---KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~-~---~~v~~~~~~~~~~~-------~  242 (344)
                      .|+++||+|+ |  ++|.+.++.+...|++|++++++++.++.+.   ++.+. .   ...|-.+++.+.+.       -
T Consensus         5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (256)
T 4fs3_A            5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV   84 (256)
T ss_dssp             TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5789999996 5  8999999998899999999999987665543   33342 1   12355555444332       2


Q ss_pred             CCccEEEECCCCch--------------hH---------------HHHHHhcccCCEEEEEcCC
Q 019199          243 KSLDFIIDTASGDH--------------PF---------------DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       243 ~~~dvvid~~g~~~--------------~~---------------~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++|+++++.|...              .+               +.++..++.+|+||.++..
T Consensus        85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~  148 (256)
T 4fs3_A           85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYL  148 (256)
T ss_dssp             CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECG
T ss_pred             CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEecc
Confidence            78999999887310              01               1233456778999999765

>4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus}

Probab=97.54  E-value=0.00055  Score=59.70  Aligned_cols=76  Identities=20%  Similarity=0.211  Sum_probs=56.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      ..+.++||+|+ |++|.+.+..+...|++|++++++.++++.+.++++..   ...|-.+.+.+.+.       .+++|+
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~  105 (272)
T 4dyv_A           26 TGKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDV  105 (272)
T ss_dssp             --CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35678899987 99999999999889999999999998887776666532   12355565544332       258999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus       106 lVnnAg~  112 (272)
T 4dyv_A          106 LFNNAGT  112 (272)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0

Probab=97.53  E-value=0.00084  Score=58.43  Aligned_cols=75  Identities=20%  Similarity=0.226  Sum_probs=57.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++..   ...|-.+.+.+.+.       -+++|++
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   89 (271)
T 3tzq_B           10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV   89 (271)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999998 99999999999999999999999998887776666632   22355565544332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        90 v~nAg~   95 (271)
T 3tzq_B           90 DNNAAH   95 (271)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            998874

>3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0

Probab=97.51  E-value=0.00079  Score=57.64  Aligned_cols=76  Identities=18%  Similarity=0.238  Sum_probs=57.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE---EeCCCHHHHHHh---cCCccEEEEC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---VVSSDLEQMKAL---GKSLDFIIDT  251 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~---~~~~dvvid~  251 (344)
                      .++.++||+|+ |++|.+.+..+...|++|++++++.++++.+.+++.....   .|..+.+.+.+.   .+++|+++++
T Consensus        12 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~li~~   91 (249)
T 3f9i_A           12 LTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKTSNLDILVCN   91 (249)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTCSCCSEEEEC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            57889999997 9999999999988999999999999888777666654322   244455544433   2579999999


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        92 Ag~   94 (249)
T 3f9i_A           92 AGI   94 (249)
T ss_dssp             CC-
T ss_pred             CCC
Confidence            883

>1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9

Probab=97.51  E-value=0.0015  Score=50.33  Aligned_cols=76  Identities=13%  Similarity=0.179  Sum_probs=57.5

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHh-cCCccEEEECCCCch
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKAL-GKSLDFIIDTASGDH  256 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~dvvid~~g~~~  256 (344)
                      +.+++|+|+|.+|...++.+...|.+|+++++++++.+.+.+.++...+. +..+.+.+.+. ..++|+++.+++...
T Consensus         4 ~m~i~IiG~G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~~~l~~~~~~~~d~vi~~~~~~~   81 (140)
T 1lss_A            4 GMYIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE   81 (140)
T ss_dssp             -CEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCHHHHHHcCcccCCEEEEeeCCch
Confidence            45789999999999999999889999999999988887775556654332 34455555443 367999999998764

>3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis}

Probab=97.50  E-value=0.00089  Score=58.46  Aligned_cols=75  Identities=17%  Similarity=0.193  Sum_probs=57.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.++++.+...|++|++++++.++.+.+.++++...   ..|-.+.+.+.+.       .+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l   83 (281)
T 3m1a_A            4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL   83 (281)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence            4678999987 999999999999999999999999988877766666432   2345555544332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        84 v~~Ag~   89 (281)
T 3m1a_A           84 VNNAGR   89 (281)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999884

>3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans}

Probab=97.50  E-value=0.0006  Score=57.86  Aligned_cols=95  Identities=17%  Similarity=0.121  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEE-eCCCHHHHHHhcCCccEEEECCCCch
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFV-VSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v-~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      .|.+|||+|+ |.+|..++..+...|++|+++++++++.+.+ ...+. ..+. |..  +.+.+.-+++|++|++.|...
T Consensus        20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~-~~~~~~~~~~~Dl~--~~~~~~~~~~D~vi~~ag~~~   96 (236)
T 3e8x_A           20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPEL-RERGASDIVVANLE--EDFSHAFASIDAVVFAAGSGP   96 (236)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHTTCSEEEECCTT--SCCGGGGTTCSEEEECCCCCT
T ss_pred             CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHH-HhCCCceEEEcccH--HHHHHHHcCCCEEEECCCCCC
Confidence            4688999998 9999999999999999999999999988776 34565 3322 222  223333468999999998531


Q ss_pred             -------------hHHHHHHhccc--CCEEEEEcCC
Q 019199          257 -------------PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       257 -------------~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                                   ....+++.++.  .++++.++..
T Consensus        97 ~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  132 (236)
T 3e8x_A           97 HTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSV  132 (236)
T ss_dssp             TSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCT
T ss_pred             CCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecC
Confidence                         12234444432  4799998765

>2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.50  E-value=0.0016  Score=56.36  Aligned_cols=75  Identities=23%  Similarity=0.244  Sum_probs=56.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|++
T Consensus         5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   84 (263)
T 2a4k_A            5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV   84 (263)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence            4678999998 999999999998899999999999988877756665322   2355555544332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        85 vnnAg~   90 (263)
T 2a4k_A           85 AHFAGV   90 (263)
T ss_dssp             EEGGGG
T ss_pred             EECCCC
Confidence            998873

>2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A*

Probab=97.49  E-value=0.00089  Score=57.41  Aligned_cols=75  Identities=21%  Similarity=0.274  Sum_probs=56.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE----EEeCCCHHHHHHh------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK----FVVSSDLEQMKAL------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~----~v~~~~~~~~~~~------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...    ..|..+.+.+.+.      .+++|++
T Consensus        10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l   89 (254)
T 2wsb_A           10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL   89 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence            4678999998 999999999998899999999999887766655555332    2344555544332      2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |++.|.
T Consensus        90 i~~Ag~   95 (254)
T 2wsb_A           90 VNSAGI   95 (254)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            999874

>1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2

Probab=97.46  E-value=0.0017  Score=55.80  Aligned_cols=75  Identities=20%  Similarity=0.188  Sum_probs=55.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE---EeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---VVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++++....   .|-.+.+.+.+.       .+++|++
T Consensus         5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   84 (253)
T 1hxh_A            5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL   84 (253)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 9999999999988999999999998887766556554322   244555443332       2578999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        85 v~~Ag~   90 (253)
T 1hxh_A           85 VNNAGI   90 (253)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A*

Probab=97.46  E-value=0.00062  Score=60.51  Aligned_cols=86  Identities=12%  Similarity=0.181  Sum_probs=60.5

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHhC----CC-cEEEeCCCHHHHH
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS---TSKKEEALSLL----GA-DKFVVSSDLEQMK  239 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~---~~~~~~~~~~~----g~-~~~v~~~~~~~~~  239 (344)
                      ..+|.....--.|.++||+|+|++|.+++..+...|+ +|+++.++   .++.+.+.+++    +. ...++..+.+.+.
T Consensus       142 ~~~L~~~~~~l~gk~~lVlGaGG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~  221 (315)
T 3tnl_A          142 MRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLR  221 (315)
T ss_dssp             HHHHHHTTCCCTTSEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHHcCCCccCCEEEEECCChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHH
Confidence            3445443332468899999999999999999999999 89999999   66665554443    32 2345555544444


Q ss_pred             HhcCCccEEEECCCC
Q 019199          240 ALGKSLDFIIDTASG  254 (344)
Q Consensus       240 ~~~~~~dvvid~~g~  254 (344)
                      +...++|++|++++.
T Consensus       222 ~~l~~aDiIINaTp~  236 (315)
T 3tnl_A          222 KEIAESVIFTNATGV  236 (315)
T ss_dssp             HHHHTCSEEEECSST
T ss_pred             hhhcCCCEEEECccC
Confidence            444579999999863

>2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A*

Probab=97.46  E-value=0.0026  Score=54.49  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++ ++.+...++.+...   ..|-.+.+.+.+.       .+++|+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   85 (249)
T 2ew8_A            6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   85 (249)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCCE
Confidence            4678999998 9999999999988999999999988 66554334556432   2355555544332       267999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        86 lv~nAg~   92 (249)
T 2ew8_A           86 LVNNAGI   92 (249)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999874

>3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti}

Probab=97.45  E-value=0.0016  Score=56.48  Aligned_cols=75  Identities=16%  Similarity=0.234  Sum_probs=55.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.++++.+.+++   |...   ..|-.+.+.+.+.       .+++
T Consensus         3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i   82 (264)
T 3tfo_A            3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI   82 (264)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 99999999999899999999999988776654443   4322   2355555544332       2679


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        83 D~lVnnAG~   91 (264)
T 3tfo_A           83 DVLVNNAGV   91 (264)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999874

>3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A*

Probab=97.45  E-value=0.001  Score=55.73  Aligned_cols=95  Identities=6%  Similarity=0.026  Sum_probs=67.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHH-HCCCeEEEEeCCch-hHHHHHHhCCCc-E--EEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          182 KSLGVIGL-GGLGHMAVKFGK-AFGLNVTVLSTSTS-KKEEALSLLGAD-K--FVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~-~~g~~V~~~~~~~~-~~~~~~~~~g~~-~--~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      .++||+|+ |.+|.+.++.+. ..|++|++++++++ +.+.+. ..+.. .  ..|..+.+.+.+...++|++|++.|..
T Consensus         6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~~~~~~~~~~~d~vv~~ag~~   84 (221)
T 3r6d_A            6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNPGXLEQAVTNAEVVFVGAMES   84 (221)
T ss_dssp             SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCHHHHHHHHTTCSEEEESCCCC
T ss_pred             EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCHHHHHHHHcCCCEEEEcCCCC
Confidence            46999997 999999988887 89999999999987 665542 22322 2  225566677766667899999999863


Q ss_pred             h-hHHHHHHhcccC--CEEEEEcCC
Q 019199          256 H-PFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       256 ~-~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                      . ..+.+++.++..  +++|.++..
T Consensus        85 n~~~~~~~~~~~~~~~~~iv~iSs~  109 (221)
T 3r6d_A           85 GSDMASIVKALSRXNIRRVIGVSMA  109 (221)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred             ChhHHHHHHHHHhcCCCeEEEEeec
Confidence            1 145555555443  689888654

>3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae}

Probab=97.44  E-value=0.001  Score=53.47  Aligned_cols=99  Identities=22%  Similarity=0.244  Sum_probs=69.4

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      .++++++||.+|+|. |..+..+++.. +.+|++++.+++..+.+++.   .|..  ..+..+..+.+....+.+|+|+.
T Consensus        22 ~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~D~i~~  100 (178)
T 3hm2_A           22 APKPHETLWDIGGGS-GSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRIAVQQGAPRAFDDVPDNPDVIFI  100 (178)
T ss_dssp             CCCTTEEEEEESTTT-THHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSEEEECCTTGGGGGCCSCCSEEEE
T ss_pred             cccCCCeEEEeCCCC-CHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCEEEecchHhhhhccCCCCCEEEE
Confidence            348899999999985 88888988887 56999999999877766432   3432  23333322322222267999997


Q ss_pred             CCCCc--hhHHHHHHhcccCCEEEEEcC
Q 019199          251 TASGD--HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       251 ~~g~~--~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      .....  ..++.+.+.|+++|+++....
T Consensus       101 ~~~~~~~~~l~~~~~~L~~gG~l~~~~~  128 (178)
T 3hm2_A          101 GGGLTAPGVFAAAWKRLPVGGRLVANAV  128 (178)
T ss_dssp             CC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred             CCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence            55433  368999999999999987743

>1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2

Probab=97.41  E-value=0.0023  Score=55.35  Aligned_cols=75  Identities=20%  Similarity=0.181  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++     +...   ..|-.+.+.+.+.       .+
T Consensus        12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   91 (267)
T 1iy8_A           12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   91 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 99999999998889999999999988765543332     4322   2355555544332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        92 ~id~lv~nAg~  102 (267)
T 1iy8_A           92 RIDGFFNNAGI  102 (267)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999873

>3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp}

Probab=97.39  E-value=0.0011  Score=58.66  Aligned_cols=76  Identities=21%  Similarity=0.218  Sum_probs=56.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -.|.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.+++   +...   ..|-.+.+.+.+.       .++
T Consensus        29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  108 (301)
T 3tjr_A           29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG  108 (301)
T ss_dssp             STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence            35789999998 99999999999999999999999988776654433   4322   2355555544332       258


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus       109 id~lvnnAg~  118 (301)
T 3tjr_A          109 VDVVFSNAGI  118 (301)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999884

>3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A

Probab=97.39  E-value=0.0031  Score=54.10  Aligned_cols=76  Identities=21%  Similarity=0.232  Sum_probs=54.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----C--Cc-EEEeC--CCHHHHHHh-------
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----G--AD-KFVVS--SDLEQMKAL-------  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g--~~-~~v~~--~~~~~~~~~-------  241 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++    +  .. ...|.  .+.+.+.+.       
T Consensus        10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~   89 (252)
T 3f1l_A           10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN   89 (252)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence            35789999998 99999999998889999999999988766553332    2  11 22344  444433322       


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                      .+++|+++++.|.
T Consensus        90 ~g~id~lv~nAg~  102 (252)
T 3f1l_A           90 YPRLDGVLHNAGL  102 (252)
T ss_dssp             CSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2579999999884

>1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A*

Probab=97.38  E-value=0.0014  Score=57.48  Aligned_cols=98  Identities=13%  Similarity=0.033  Sum_probs=67.1

Q ss_pred             CCCCEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CC-cEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GA-DKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~-~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      -.|.++||+| +|++|.+++..+...|++|++++++.++.+.+.+++    +. ....|..+.+.+.+....+|++++++
T Consensus       117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~DvlVn~a  196 (287)
T 1lu9_A          117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVFTAG  196 (287)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEEECC
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCHHHHHHHHHhCCEEEECC
Confidence            4678999999 599999999999999999999999988776554443    32 23456667666666666799999999


Q ss_pred             CCc--hhHHHHHHhcccCCEEEEEcC
Q 019199          253 SGD--HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       253 g~~--~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +..  .....-+..+.+.-.++.+..
T Consensus       197 g~g~~~~~~~~~~~~~~~~~~~dvn~  222 (287)
T 1lu9_A          197 AIGLELLPQAAWQNESSIEIVADYNA  222 (287)
T ss_dssp             CTTCCSBCHHHHTTCTTCCEEEECCC
T ss_pred             CccccCCChhHcCchHHHHHHHHhhh
Confidence            732  111112333455555655543

>3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A*

Probab=97.37  E-value=0.0023  Score=55.33  Aligned_cols=98  Identities=11%  Similarity=0.093  Sum_probs=64.4

Q ss_pred             CCCEEEEECC-Ch--HHHHHHHHHHHCCCeEEEEeCCchhHH---HHHHhCCC-c-E--EEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GG--LGHMAVKFGKAFGLNVTVLSTSTSKKE---EALSLLGA-D-K--FVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~--~G~~ai~~a~~~g~~V~~~~~~~~~~~---~~~~~~g~-~-~--~v~~~~~~~~~~~-------~  242 (344)
                      .|.++||+|+ |.  +|.+.++.+...|++|++++++++..+   .+.++.+. . .  ..|-.+.+.+++.       .
T Consensus         6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~   85 (266)
T 3oig_A            6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV   85 (266)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred             CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence            5788999987 66  999999988889999999988865333   33233442 1 1  2344454433322       2


Q ss_pred             CCccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          243 KSLDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       243 ~~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++|+++++.|...                             ..+.++..++++|+|+.++..
T Consensus        86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~  149 (266)
T 3oig_A           86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYL  149 (266)
T ss_dssp             SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECG
T ss_pred             CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEecc
Confidence            57999999887421                             123344456668999999765

>2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2

Probab=97.37  E-value=0.0024  Score=55.23  Aligned_cols=98  Identities=15%  Similarity=0.132  Sum_probs=65.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+++     +..   ...|-.+.+.+.+.       .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (267)
T 2gdz_A            6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   85 (267)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence            4678999998 99999999999889999999999887765443332     211   12355555444332       25


Q ss_pred             CccEEEECCCCc--h---------------hHHHHHHhccc-----CCEEEEEcCC
Q 019199          244 SLDFIIDTASGD--H---------------PFDAYMSLLKV-----AGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~--~---------------~~~~~~~~l~~-----~G~iv~~g~~  277 (344)
                      ++|+++++.|..  .               ..+.++..++.     .|+++.++..
T Consensus        86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~  141 (267)
T 2gdz_A           86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  141 (267)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCc
Confidence            799999998842  1               12234444433     5899988754

>1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5

Probab=97.35  E-value=0.00057  Score=59.60  Aligned_cols=103  Identities=18%  Similarity=0.244  Sum_probs=66.0

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      +|...+.--++.+++|+|+|++|.+++..+...|++|+++.++.++.+.+.++++....++..+.+.+.+  +++|++++
T Consensus       109 ~L~~~~~~l~~k~vlViGaGg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~~~~~~--~~~DivVn  186 (271)
T 1nyt_A          109 DLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDELEG--HEFDLIIN  186 (271)
T ss_dssp             HHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGGGTT--CCCSEEEE
T ss_pred             HHHhcCcCcCCCEEEEECCcHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecHHHhcc--CCCCEEEE
Confidence            3444332246789999999999999999999999999999999888777666665310011111111111  57999999


Q ss_pred             CCCCchhHHH----HHHhcccCCEEEEEcC
Q 019199          251 TASGDHPFDA----YMSLLKVAGVYVLVGF  276 (344)
Q Consensus       251 ~~g~~~~~~~----~~~~l~~~G~iv~~g~  276 (344)
                      +++.... ..    -...++++..++++..
T Consensus       187 ~t~~~~~-~~~~~i~~~~l~~~~~v~D~~y  215 (271)
T 1nyt_A          187 ATSSGIS-GDIPAIPSSLIHPGIYCYDMFY  215 (271)
T ss_dssp             CCSCGGG-TCCCCCCGGGCCTTCEEEESCC
T ss_pred             CCCCCCC-CCCCCCCHHHcCCCCEEEEecc
Confidence            9986542 10    0123455555555543

>3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV}

Probab=97.35  E-value=0.0016  Score=56.34  Aligned_cols=75  Identities=17%  Similarity=0.098  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.....++.+... ..|-.+.+.+.+.       .+++|++++
T Consensus        26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv~  105 (260)
T 3gem_A           26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELRQAGAVALYGDFSCETGIMAFIDLLKTQTSSLRAVVH  105 (260)
T ss_dssp             -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHHHHTCEEEECCTTSHHHHHHHHHHHHHHCSCCSEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhcCCeEEECCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            4678999987 999999999988899999999999887554445556432 2355565544332       267999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus       106 nAg~  109 (260)
T 3gem_A          106 NASE  109 (260)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9883

>3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A*

Probab=97.34  E-value=0.0036  Score=54.13  Aligned_cols=75  Identities=17%  Similarity=0.139  Sum_probs=54.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCc-E---EEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGAD-K---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~-~---~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.++    .+.. .   ..|-.+.+.+.+.       .+
T Consensus         7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   86 (265)
T 3lf2_A            7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG   86 (265)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence            5788999998 9999999999989999999999998876555333    3322 2   2355555444332       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        87 ~id~lvnnAg~   97 (265)
T 3lf2_A           87 CASILVNNAGQ   97 (265)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999884

>3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A*

Probab=97.34  E-value=0.0013  Score=56.37  Aligned_cols=75  Identities=27%  Similarity=0.274  Sum_probs=57.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE---eCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.++++....+   |-.+.+.+.+.       .+++|++
T Consensus         5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   84 (247)
T 3rwb_A            5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALTGGIDIL   84 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5788999998 99999999999999999999999998887776666654332   44455443332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        85 v~nAg~   90 (247)
T 3rwb_A           85 VNNASI   90 (247)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2

Probab=97.33  E-value=0.0024  Score=54.92  Aligned_cols=74  Identities=23%  Similarity=0.174  Sum_probs=53.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~d  246 (344)
                      +.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++   .|...   ..|..+.+.+.+.       .+++|
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (256)
T 1geg_A            2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFD   81 (256)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCCC
Confidence            467999998 9999999999988999999999998766554333   24322   2355555544332       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|++.|.
T Consensus        82 ~lv~nAg~   89 (256)
T 1geg_A           82 VIVNNAGV   89 (256)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis}

Probab=97.33  E-value=0.0011  Score=57.43  Aligned_cols=96  Identities=16%  Similarity=0.138  Sum_probs=72.0

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ..+||+...+...+.....--.|.+++|+|.| .+|..+++++...|++|+++.+....++                   
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------  199 (285)
T 3l07_A          139 CLESCTPKGIMTMLREYGIKTEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTTDLK-------------------  199 (285)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCchhHH-------------------
Confidence            35677777777777777655689999999985 5899999999999999998876543332                   


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        +..+.+|++|.++|.+..+.  -++++++..++++|..
T Consensus       200 --~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  235 (285)
T 3l07_A          200 --SHTTKADILIVAVGKPNFIT--ADMVKEGAVVIDVGIN  235 (285)
T ss_dssp             --HHHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred             --HhcccCCEEEECCCCCCCCC--HHHcCCCcEEEEeccc
Confidence              22356899999998775332  2567999899988754

>3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5}

Probab=97.33  E-value=0.0022  Score=55.39  Aligned_cols=76  Identities=17%  Similarity=0.201  Sum_probs=55.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -.+.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.++   .+...   ..|..+.+.+.+.       .++
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~  106 (262)
T 3rkr_A           27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR  106 (262)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence            35688999997 9999999998888999999999998876655333   34322   2345555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       107 id~lv~~Ag~  116 (262)
T 3rkr_A          107 CDVLVNNAGV  116 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999885

>3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=97.32  E-value=0.0018  Score=56.06  Aligned_cols=76  Identities=17%  Similarity=0.195  Sum_probs=55.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -.|.++||+|+ +++|.+.+..+...|++|++++++.++.+.+.+++   |...   ..|-.+.+.+.+.       .++
T Consensus         9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (264)
T 3ucx_A            9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAYGR   88 (264)
T ss_dssp             TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            35789999998 89999999999889999999999988776554333   4322   2355555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        89 id~lv~nAg~   98 (264)
T 3ucx_A           89 VDVVINNAFR   98 (264)
T ss_dssp             CSEEEECCCS
T ss_pred             CcEEEECCCC
Confidence            9999998864

>3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii}

Probab=97.31  E-value=0.0011  Score=60.43  Aligned_cols=95  Identities=17%  Similarity=0.196  Sum_probs=73.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      .-+|+|+|+|.+|..+++.+.. ...|.+++++.++++.+ ++......+|..+.+.+.+..+++|+|+++++......-
T Consensus        16 ~mkilvlGaG~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~-~~~~~~~~~d~~d~~~l~~~~~~~DvVi~~~p~~~~~~v   93 (365)
T 3abi_A           16 HMKVLILGAGNIGRAIAWDLKD-EFDVYIGDVNNENLEKV-KEFATPLKVDASNFDKLVEVMKEFELVIGALPGFLGFKS   93 (365)
T ss_dssp             CCEEEEECCSHHHHHHHHHHTT-TSEEEEEESCHHHHHHH-TTTSEEEECCTTCHHHHHHHHTTCSEEEECCCGGGHHHH
T ss_pred             ccEEEEECCCHHHHHHHHHHhc-CCCeEEEEcCHHHHHHH-hccCCcEEEecCCHHHHHHHHhCCCEEEEecCCcccchH
Confidence            3469999999999988887753 46899999998888777 444434456777888887777889999999987655667


Q ss_pred             HHHhcccCCEEEEEcCC
Q 019199          261 YMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       261 ~~~~l~~~G~iv~~g~~  277 (344)
                      +-.|++.+-.++++...
T Consensus        94 ~~~~~~~g~~yvD~s~~  110 (365)
T 3abi_A           94 IKAAIKSKVDMVDVSFM  110 (365)
T ss_dssp             HHHHHHHTCEEEECCCC
T ss_pred             HHHHHhcCcceEeeecc
Confidence            77788888888887643

>3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A*

Probab=97.31  E-value=0.0046  Score=54.32  Aligned_cols=98  Identities=20%  Similarity=0.202  Sum_probs=66.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhH-HHH---HHhCCCcEE---EeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKK-EEA---LSLLGADKF---VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~-~~~---~~~~g~~~~---v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|++++++.++. +.+   .+..|....   .|-.+.+.+.+.       .++
T Consensus        46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  125 (291)
T 3ijr_A           46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS  125 (291)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 9999999999999999999999887642 222   233454322   245555443332       267


Q ss_pred             ccEEEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+++++.|..                          ...+.++..++.+|+|+.++..
T Consensus       126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~  184 (291)
T 3ijr_A          126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASI  184 (291)
T ss_dssp             CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCT
T ss_pred             CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEech
Confidence            99999987732                          0123444556778999999765

>1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=97.31  E-value=0.0024  Score=55.57  Aligned_cols=75  Identities=17%  Similarity=0.224  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---C---Cc---EEEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G---AD---KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g---~~---~~v~~~~~~~~~~~-------~  242 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++   .   ..   ...|-.+.+.+.+.       .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~   84 (278)
T 1spx_A            5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   84 (278)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence            4678999998 99999999988889999999999988776654443   2   11   12355555544332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++++.|.
T Consensus        85 g~id~lv~~Ag~   96 (278)
T 1spx_A           85 GKLDILVNNAGA   96 (278)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEEEECCCC
Confidence            589999999874

>1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2

Probab=97.30  E-value=0.0014  Score=56.07  Aligned_cols=75  Identities=17%  Similarity=0.171  Sum_probs=56.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++|... ..|-.+.+.+.+.       .+++|++++
T Consensus         4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn   83 (245)
T 1uls_A            4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (245)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999998 999999999998899999999999888777655666432 2355555544332       257999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        84 ~Ag~   87 (245)
T 1uls_A           84 YAGI   87 (245)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9883

>3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis}

Probab=97.30  E-value=0.0013  Score=57.10  Aligned_cols=75  Identities=19%  Similarity=0.163  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc---EEEeCCCHHHHHHh---cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD---KFVVSSDLEQMKAL---GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~---~~v~~~~~~~~~~~---~~~~dv  247 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+...+++     +..   ...|..+.+.+.+.   -+++|+
T Consensus         9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~g~id~   88 (267)
T 3t4x_A            9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTEQGCQDVIEKYPKVDI   88 (267)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSHHHHHHHHHHCCCCSE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCHHHHHHHHHhcCCCCE
Confidence            5788999987 99999999998889999999999988765543332     221   12244555544433   367999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        89 lv~nAg~   95 (267)
T 3t4x_A           89 LINNLGI   95 (267)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2

Probab=97.30  E-value=0.0014  Score=57.18  Aligned_cols=75  Identities=21%  Similarity=0.196  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--c---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--D---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.++++.+...|++|++++++.++.+.+.++   .|.  .   ...|..+.+.+.+.       .+
T Consensus        31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  110 (279)
T 1xg5_A           31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS  110 (279)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence            4678999998 9999999999988999999999998766554322   231  1   12345555544332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus       111 ~iD~vi~~Ag~  121 (279)
T 1xg5_A          111 GVDICINNAGL  121 (279)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A*

Probab=97.30  E-value=0.0023  Score=55.11  Aligned_cols=75  Identities=21%  Similarity=0.215  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhC----CCcEE---EeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLL----GADKF---VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++ .+.+.+++    |....   .|-.+.+.+.+.       .+
T Consensus         3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   82 (260)
T 1x1t_A            3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 999999999998899999999998876 55443332    43322   244555444332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus        83 ~iD~lv~~Ag~   93 (260)
T 1x1t_A           83 RIDILVNNAGI   93 (260)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999873

>3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A*

Probab=97.29  E-value=0.003  Score=55.62  Aligned_cols=99  Identities=17%  Similarity=0.173  Sum_probs=66.4

Q ss_pred             CCCCEEEEECC-Ch--HHHHHHHHHHHCCCeEEEEeCCchhH---HHHHHhCCCcE--EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GG--LGHMAVKFGKAFGLNVTVLSTSTSKK---EEALSLLGADK--FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~--~G~~ai~~a~~~g~~V~~~~~~~~~~---~~~~~~~g~~~--~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ |+  +|.+.++.+...|++|++++++++..   +.+.++.+...  ..|-.+.+.+.++       .+
T Consensus        29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (293)
T 3grk_A           29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKWG  108 (293)
T ss_dssp             TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcC
Confidence            45789999987 66  99999999888999999999885432   22323344322  2355555544332       25


Q ss_pred             CccEEEECCCCch-----------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGDH-----------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~~-----------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.|...                             ..+.++..++++|+|+.++..
T Consensus       109 ~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~  171 (293)
T 3grk_A          109 KLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYY  171 (293)
T ss_dssp             CCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECG
T ss_pred             CCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeeh
Confidence            7999999988431                             123444556678999998765

>3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444}

Probab=97.28  E-value=0.0014  Score=58.45  Aligned_cols=75  Identities=20%  Similarity=0.209  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC--c---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA--D---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .|.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.+++   +.  .   ...|-.+.+.+.+.       .+
T Consensus         7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   86 (319)
T 3ioy_A            7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARFG   86 (319)
T ss_dssp             TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhCC
Confidence            5678999998 99999999999889999999999988776554332   22  2   22355555444332       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus        87 ~id~lv~nAg~   97 (319)
T 3ioy_A           87 PVSILCNNAGV   97 (319)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999983

>1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2

Probab=97.27  E-value=0.0037  Score=53.95  Aligned_cols=75  Identities=20%  Similarity=0.219  Sum_probs=54.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|..+.+.+.+.       .+++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   85 (262)
T 1zem_A            6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   85 (262)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 99999999999999999999999987765543332   4322   2355555443322       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        86 d~lv~nAg~   94 (262)
T 1zem_A           86 DFLFNNAGY   94 (262)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A*

Probab=97.26  E-value=0.0031  Score=55.56  Aligned_cols=76  Identities=26%  Similarity=0.232  Sum_probs=53.3

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCchhHHH---HHHhCCCcEE--EeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTSKKEE---ALSLLGADKF--VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~~~~~---~~~~~g~~~~--v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ |  ++|.+.++.+...|++|++++++++..+.   +.+..+....  .|-.+.+.+.++       .+
T Consensus        28 l~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  107 (296)
T 3k31_A           28 MEGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWG  107 (296)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999997 5  99999999888899999999998754332   2233443222  355565544332       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus       108 ~iD~lVnnAG~  118 (296)
T 3k31_A          108 SLDFVVHAVAF  118 (296)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999984

>2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus}

Probab=97.26  E-value=0.0045  Score=52.25  Aligned_cols=75  Identities=12%  Similarity=0.099  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--FVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++++...  ..|..+.+.+.+.       .+++|+++
T Consensus         4 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li   83 (234)
T 2ehd_A            4 MKGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALV   83 (234)
T ss_dssp             CCCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            3568999987 999999999998899999999999888776655554222  2345555444332       25799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        84 ~~Ag~   88 (234)
T 2ehd_A           84 NNAGV   88 (234)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99873

>2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus}

Probab=97.26  E-value=0.0019  Score=57.04  Aligned_cols=95  Identities=17%  Similarity=0.107  Sum_probs=67.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      -.+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++..  .+++   .+.+.+...++|++|++++..
T Consensus       139 l~~~~vlVlGaGg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~---~~~~~~~~~~aDivIn~t~~~  215 (297)
T 2egg_A          139 LDGKRILVIGAGGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS---LAEAETRLAEYDIIINTTSVG  215 (297)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC---HHHHHHTGGGCSEEEECSCTT
T ss_pred             CCCCEEEEECcHHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee---HHHHHhhhccCCEEEECCCCC
Confidence            467899999999999999999999998 9999999999887776777752  2222   233444456799999999854


Q ss_pred             hhH-----HHHHHhcccCCEEEEEcC
Q 019199          256 HPF-----DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       256 ~~~-----~~~~~~l~~~G~iv~~g~  276 (344)
                      ..-     ......++++..++++..
T Consensus       216 ~~~~~~~~~i~~~~l~~~~~v~D~~y  241 (297)
T 2egg_A          216 MHPRVEVQPLSLERLRPGVIVSDIIY  241 (297)
T ss_dssp             CSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred             CCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence            310     011234666666666654

>1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A*

Probab=97.25  E-value=0.0037  Score=54.61  Aligned_cols=98  Identities=20%  Similarity=0.194  Sum_probs=65.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHhCCCcEE---EeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEA---LSLLGADKF---VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~---~~~~g~~~~---v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|++++++.++ .+.+   .+..|....   .|..+.+.+.+.       .++
T Consensus        28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~  107 (283)
T 1g0o_A           28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK  107 (283)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHHhCCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 999999999999999999999988654 2222   133454322   244554433322       257


Q ss_pred             ccEEEECCCCch-------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASGDH-------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~~-------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+++++.|...                         ..+.++..++..|+++.++..
T Consensus       108 iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  165 (283)
T 1g0o_A          108 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  165 (283)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEech
Confidence            999999988421                         123445556667999999764

>1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A*

Probab=97.25  E-value=0.0017  Score=56.19  Aligned_cols=75  Identities=23%  Similarity=0.246  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKA-FGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~-~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+++..+.. .|++|++++++.++.+.+.+++   +..   ...|-.+.+.+.+.       .++
T Consensus         3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~   82 (276)
T 1wma_A            3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   82 (276)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            5678999998 9999999888887 8999999999887665443332   322   12344555444332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        83 id~li~~Ag~   92 (276)
T 1wma_A           83 LDVLVNNAGI   92 (276)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999998874

>1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A*

Probab=97.24  E-value=0.0012  Score=56.93  Aligned_cols=75  Identities=21%  Similarity=0.206  Sum_probs=56.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l   83 (254)
T 1hdc_A            4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 999999999999999999999999888777656665322   2355555444332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        84 v~nAg~   89 (254)
T 1hdc_A           84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0

Probab=97.23  E-value=0.002  Score=56.82  Aligned_cols=76  Identities=22%  Similarity=0.251  Sum_probs=53.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---C-Cc---EEEeCCCH-HHHHHh-------c
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G-AD---KFVVSSDL-EQMKAL-------G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g-~~---~~v~~~~~-~~~~~~-------~  242 (344)
                      ..+.++||+|+ |++|.+++..+...|++|++++++.++.+.+.+++   + ..   ...|-.+. +.+.+.       .
T Consensus        10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~   89 (311)
T 3o26_A           10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF   89 (311)
T ss_dssp             --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred             CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence            35788999998 99999999998889999999999988765554443   2 22   12344554 433322       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|++|++.|.
T Consensus        90 g~iD~lv~nAg~  101 (311)
T 3o26_A           90 GKLDILVNNAGV  101 (311)
T ss_dssp             SSCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            689999999984

>3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0

Probab=97.23  E-value=0.002  Score=53.27  Aligned_cols=115  Identities=18%  Similarity=0.133  Sum_probs=76.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      .++++++||-+|+|. |..++.+++.. +.+|++++.+++..+.+++.   .|.+  .++..+..+.... ...+|+++.
T Consensus        37 ~~~~~~~vLDiG~G~-G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~-~~~~D~i~~  114 (204)
T 3e05_A           37 RLQDDLVMWDIGAGS-ASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAFAPEGLDD-LPDPDRVFI  114 (204)
T ss_dssp             TCCTTCEEEEETCTT-CHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECCTTTTCTT-SCCCSEEEE
T ss_pred             CCCCCCEEEEECCCC-CHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCChhhhhhc-CCCCCEEEE
Confidence            448899999999974 88888899886 36999999999887776433   2321  2222222111111 156999997


Q ss_pred             CCCC---chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          251 TASG---DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       251 ~~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                      ....   ...+..+.+.|+|+|+++.....              .+..+.+.+++.+..+
T Consensus       115 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~--------------~~~~~~~~~~l~~~g~  160 (204)
T 3e05_A          115 GGSGGMLEEIIDAVDRRLKSEGVIVLNAVT--------------LDTLTKAVEFLEDHGY  160 (204)
T ss_dssp             SCCTTCHHHHHHHHHHHCCTTCEEEEEECB--------------HHHHHHHHHHHHHTTC
T ss_pred             CCCCcCHHHHHHHHHHhcCCCeEEEEEecc--------------cccHHHHHHHHHHCCC
Confidence            6542   34578888999999999987432              1235566666666554

>4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis}

Probab=97.23  E-value=0.0014  Score=56.86  Aligned_cols=76  Identities=20%  Similarity=0.215  Sum_probs=54.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.++    .+...   ..|-.+.+.+.+.       .+
T Consensus        18 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   97 (266)
T 4egf_A           18 LDGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAFG   97 (266)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHHT
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 9999999999999999999999998876655333    34332   2344444333222       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        98 ~id~lv~nAg~  108 (266)
T 4egf_A           98 GLDVLVNNAGI  108 (266)
T ss_dssp             SCSEEEEECCC
T ss_pred             CCCEEEECCCc
Confidence            89999998874

>2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A*

Probab=97.21  E-value=0.0037  Score=54.20  Aligned_cols=75  Identities=17%  Similarity=0.276  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c-E--EEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D-K--FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~--~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++++.  . .  ..|..+.+.+.+.       .+++|
T Consensus        15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   94 (278)
T 2bgk_A           15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD   94 (278)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence            5678999998 9999999999988999999999988776555444432  1 1  2344555544332       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|++.|.
T Consensus        95 ~li~~Ag~  102 (278)
T 2bgk_A           95 IMFGNVGV  102 (278)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCcc
Confidence            99998873

>3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti}

Probab=97.21  E-value=0.0048  Score=53.61  Aligned_cols=99  Identities=18%  Similarity=0.165  Sum_probs=66.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|++++++. ++.+.+.   +..|...   ..|-.+.+.+.+.       .+
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  108 (271)
T 3v2g_A           29 LAGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALG  108 (271)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            46789999998 9999999999989999999986654 3333332   2345432   2344555444332       25


Q ss_pred             CccEEEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.|..                         ...+.++..++.+|+++.++..
T Consensus       109 ~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~  167 (271)
T 3v2g_A          109 GLDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSN  167 (271)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCG
T ss_pred             CCcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeCh
Confidence            899999998742                         1233445566778999999764

>3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp}

Probab=97.21  E-value=0.0068  Score=53.29  Aligned_cols=98  Identities=16%  Similarity=0.115  Sum_probs=65.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch--hHHH---HHHhCCCcEEE---eCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS--KKEE---ALSLLGADKFV---VSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~--~~~~---~~~~~g~~~~v---~~~~~~~~~~~-------~~  243 (344)
                      .|.++||+|+ +++|.+.+..+...|++|++++++.+  +.+.   ..++.|....+   |-.+.+.+.+.       .+
T Consensus        48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  127 (294)
T 3r3s_A           48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREALG  127 (294)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHHT
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            5789999998 99999999999999999999887632  2222   22344543322   44454443332       26


Q ss_pred             CccEEEECCCCch--------------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGDH--------------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~~--------------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.|...                          ..+.++..++++|+||.++..
T Consensus       128 ~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~  187 (294)
T 3r3s_A          128 GLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSI  187 (294)
T ss_dssp             CCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCG
T ss_pred             CCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECCh
Confidence            8999999888421                          122344456678999999765

>2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii}

Probab=97.21  E-value=0.00083  Score=56.03  Aligned_cols=97  Identities=24%  Similarity=0.190  Sum_probs=68.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHhcCCccEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      .+.++++||.+|+| .|..+..+++..+  .+|+.++.+++..+.+++.+   |..  .++..+..... ...+.+|+|+
T Consensus        74 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~  151 (215)
T 2yxe_A           74 DLKPGMKVLEIGTG-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDNVIVIVGDGTLGY-EPLAPYDRIY  151 (215)
T ss_dssp             TCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTTEEEEESCGGGCC-GGGCCEEEEE
T ss_pred             CCCCCCEEEEECCC-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEECCcccCC-CCCCCeeEEE
Confidence            44889999999997 4888899998876  69999999988777764332   321  22222211110 1135799999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ...........+.+.|+++|+++..-
T Consensus       152 ~~~~~~~~~~~~~~~L~pgG~lv~~~  177 (215)
T 2yxe_A          152 TTAAGPKIPEPLIRQLKDGGKLLMPV  177 (215)
T ss_dssp             ESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             ECCchHHHHHHHHHHcCCCcEEEEEE
Confidence            87765555678899999999998763

>2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis}

Probab=97.21  E-value=0.0024  Score=54.50  Aligned_cols=75  Identities=24%  Similarity=0.266  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++ ++++.+.+.++   .+...   ..|-.+.+.+.+.       .++
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   82 (246)
T 2uvd_A            3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ   82 (246)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 99999999999889999999998 66655443222   34332   2355555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        83 id~lv~nAg~   92 (246)
T 2uvd_A           83 VDILVNNAGV   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str}

Probab=97.20  E-value=0.0027  Score=54.73  Aligned_cols=98  Identities=14%  Similarity=0.129  Sum_probs=64.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHH---hCCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALS---LLGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ +++|.+.++.+...|++|+++ .+++++.+...+   +.|..   ...|-.+.+.+.+.       .++
T Consensus         7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   86 (259)
T 3edm_A            7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE   86 (259)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5788999998 999999999998899999988 555554443322   33432   12355555444332       258


Q ss_pred             ccEEEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+++++.|..                          ...+.++..++++|+++.++..
T Consensus        87 id~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  145 (259)
T 3edm_A           87 IHGLVHVAGGLIARKTIAEMDEAFWHQVLDVNLTSLFLTAKTALPKMAKGGAIVTFSSQ  145 (259)
T ss_dssp             EEEEEECCCCCCCCCCTTTCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             CCEEEECCCccCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCEEEEEcCH
Confidence            99999988732                          0122333445667899998754

>3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A*

Probab=97.20  E-value=0.0012  Score=62.12  Aligned_cols=91  Identities=19%  Similarity=0.223  Sum_probs=70.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|.|+|.|.+|..+++.++.+|++|++.+++..+...+ ...|... .      .+.+.....|+++.++++...+
T Consensus       275 L~GktVgIIG~G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a-~~~G~~~-~------~l~ell~~aDiVi~~~~t~~lI  346 (494)
T 3d64_A          275 IAGKIAVVAGYGDVGKGCAQSLRGLGATVWVTEIDPICALQA-AMEGYRV-V------TMEYAADKADIFVTATGNYHVI  346 (494)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSCHHHHHHH-HTTTCEE-C------CHHHHTTTCSEEEECSSSSCSB
T ss_pred             cCCCEEEEEccCHHHHHHHHHHHHCCCEEEEEeCChHhHHHH-HHcCCEe-C------CHHHHHhcCCEEEECCCccccc
Confidence            578999999999999999999999999999999988765344 2456532 1      2344556799999998755433


Q ss_pred             -HHHHHhcccCCEEEEEcCC
Q 019199          259 -DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 -~~~~~~l~~~G~iv~~g~~  277 (344)
                       ...++.++++..++.+|..
T Consensus       347 ~~~~l~~MK~gAilINvgrg  366 (494)
T 3d64_A          347 NHDHMKAMRHNAIVCNIGHF  366 (494)
T ss_dssp             CHHHHHHCCTTEEEEECSSS
T ss_pred             CHHHHhhCCCCcEEEEcCCC
Confidence             5778899999999988754

>3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0

Probab=97.19  E-value=0.0014  Score=55.80  Aligned_cols=74  Identities=18%  Similarity=0.173  Sum_probs=55.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      +.++||+|+ |++|.+.+..+...|++|+++++++++++.+.++++..   ...|-.+.+.+++.       .+++|+++
T Consensus         3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv   82 (235)
T 3l6e_A            3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL   82 (235)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence            568999998 99999999998889999999999998887775555432   12344555444332       26799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        83 nnAg~   87 (235)
T 3l6e_A           83 HCAGT   87 (235)
T ss_dssp             EECCC
T ss_pred             ECCCC
Confidence            98884

>4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major}

Probab=97.19  E-value=0.0021  Score=56.25  Aligned_cols=97  Identities=20%  Similarity=0.185  Sum_probs=72.6

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+...+...+.....--.|.+++|+|.| .+|..+++++...|++|+++.+....++                   +
T Consensus       144 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~~l~-------------------l  204 (300)
T 4a26_A          144 FTPCTAKGVIVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTSTED-------------------M  204 (300)
T ss_dssp             CCCHHHHHHHHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSCHHH-------------------H
T ss_pred             CCCCCHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCCCch-------------------h
Confidence            4677777777777777665689999999985 5899999999999999999987544332                   0


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+.+|++|.++|.+..+.  -..++++..++++|..
T Consensus       205 ~~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  241 (300)
T 4a26_A          205 IDYLRTADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTT  241 (300)
T ss_dssp             HHHHHTCSEEEECSCCTTCBC--GGGSCTTCEEEECCCE
T ss_pred             hhhhccCCEEEECCCCCCCCc--HHhcCCCcEEEEEecc
Confidence            122345899999999775332  2567999999999865

>3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp}

Probab=97.18  E-value=0.0018  Score=56.22  Aligned_cols=95  Identities=21%  Similarity=0.225  Sum_probs=72.0

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+...+...+.....--.|.+++|+|.| .+|..+++++...|++|+++.+....++                    
T Consensus       139 ~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~~L~--------------------  198 (285)
T 3p2o_A          139 FLPCTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTKDLS--------------------  198 (285)
T ss_dssp             CCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHH--------------------
T ss_pred             CCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCchhHH--------------------
Confidence            4677776677777777665689999999985 5899999999999999999886544332                    


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +..+.+|++|.++|.+..+.  -+.++++..++++|..
T Consensus       199 -~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~  234 (285)
T 3p2o_A          199 -LYTRQADLIIVAAGCVNLLR--SDMVKEGVIVVDVGIN  234 (285)
T ss_dssp             -HHHTTCSEEEECSSCTTCBC--GGGSCTTEEEEECCCE
T ss_pred             -HHhhcCCEEEECCCCCCcCC--HHHcCCCeEEEEeccC
Confidence             22356899999998775332  2567898888888855

>3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A

Probab=97.18  E-value=0.0083  Score=51.96  Aligned_cols=99  Identities=20%  Similarity=0.184  Sum_probs=66.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEAL---SLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|++++++.+ +.+.+.   +..|...   ..|-.+.+.+.+.       .+
T Consensus        16 l~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   95 (270)
T 3is3_A           16 LDGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFG   95 (270)
T ss_dssp             CTTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 99999999999999999998776543 333322   3345432   2344555444332       25


Q ss_pred             CccEEEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.|..                         ...+.++..++++|+++.++..
T Consensus        96 ~id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~  154 (270)
T 3is3_A           96 HLDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSN  154 (270)
T ss_dssp             CCCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCT
T ss_pred             CCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCc
Confidence            799999988842                         1134455667779999999765

>3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus}

Probab=97.18  E-value=0.0017  Score=56.02  Aligned_cols=75  Identities=19%  Similarity=0.182  Sum_probs=57.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|++
T Consensus         8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l   87 (261)
T 3n74_A            8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL   87 (261)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4688999998 999999999999999999999999998887766776432   2344555443332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        88 i~~Ag~   93 (261)
T 3n74_A           88 VNNAGI   93 (261)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli}

Probab=97.18  E-value=0.00098  Score=55.37  Aligned_cols=95  Identities=20%  Similarity=0.134  Sum_probs=66.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHhcCCccEEEEC
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      .++++++||-+|+|. |..+..+++. +.+|+.++.+++..+.+++.+   |..  .++..+..+.. ...+.||+|+..
T Consensus        74 ~~~~~~~vLdiG~G~-G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~-~~~~~~D~i~~~  150 (210)
T 3lbf_A           74 ELTPQSRVLEIGTGS-GYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHNVSTRHGDGWQGW-QARAPFDAIIVT  150 (210)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCC-GGGCCEEEEEES
T ss_pred             CCCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCceEEEECCcccCC-ccCCCccEEEEc
Confidence            448999999999974 8888888887 789999999998777664432   322  22222211111 113679999987


Q ss_pred             CCCchhHHHHHHhcccCCEEEEE
Q 019199          252 ASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      .........+.+.|+|+|+++..
T Consensus       151 ~~~~~~~~~~~~~L~pgG~lv~~  173 (210)
T 3lbf_A          151 AAPPEIPTALMTQLDEGGILVLP  173 (210)
T ss_dssp             SBCSSCCTHHHHTEEEEEEEEEE
T ss_pred             cchhhhhHHHHHhcccCcEEEEE
Confidence            66555466889999999999876

>3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A*

Probab=97.17  E-value=0.0017  Score=57.66  Aligned_cols=86  Identities=12%  Similarity=0.140  Sum_probs=57.7

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC---chhHHHHHHhC----CCc-EEEeCCCHHHHH
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS---TSKKEEALSLL----GAD-KFVVSSDLEQMK  239 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~---~~~~~~~~~~~----g~~-~~v~~~~~~~~~  239 (344)
                      ..+|.....--.+.++||+|+|+.|.+++..+...|+ +|+++.|+   .++.+.+.+++    +.. ..++..+.+...
T Consensus       136 ~~~L~~~~~~l~gk~~lVlGAGGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~  215 (312)
T 3t4e_A          136 IRAIKESGFDMRGKTMVLLGAGGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFT  215 (312)
T ss_dssp             HHHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHH
T ss_pred             HHHHHhcCCCcCCCEEEEECcCHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhH
Confidence            3345443332468899999999999999999999999 89999999   66665554433    322 234444432222


Q ss_pred             HhcCCccEEEECCCC
Q 019199          240 ALGKSLDFIIDTASG  254 (344)
Q Consensus       240 ~~~~~~dvvid~~g~  254 (344)
                      +...++|++|++++.
T Consensus       216 ~~l~~~DiIINaTp~  230 (312)
T 3t4e_A          216 EALASADILTNGTKV  230 (312)
T ss_dssp             HHHHHCSEEEECSST
T ss_pred             hhccCceEEEECCcC
Confidence            223459999998874

>3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis}

Probab=97.17  E-value=0.0015  Score=57.33  Aligned_cols=76  Identities=20%  Similarity=0.247  Sum_probs=58.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHhc---CCccEEEEC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKALG---KSLDFIIDT  251 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~~---~~~dvvid~  251 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++++...   ..|-.+.+.+.+..   +++|+++++
T Consensus        14 l~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~iD~lv~n   93 (291)
T 3rd5_A           14 FAQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGVSGADVLINN   93 (291)
T ss_dssp             CTTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTCCCEEEEEEC
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhcCCCCEEEEC
Confidence            45789999998 999999999998999999999999998887766665432   23455665554432   578999999


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        94 Ag~   96 (291)
T 3rd5_A           94 AGI   96 (291)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            884

>3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.16  E-value=0.0047  Score=53.84  Aligned_cols=76  Identities=18%  Similarity=0.166  Sum_probs=53.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHH---hCCCcE---EEeCCCHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-------------STSKKEEALS---LLGADK---FVVSSDLEQM  238 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-------------~~~~~~~~~~---~~g~~~---~v~~~~~~~~  238 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++             +.++.+.+.+   ..|...   ..|-.+.+.+
T Consensus        13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v   92 (280)
T 3pgx_A           13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL   92 (280)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence            46789999998 99999999999899999999987             4454444322   334332   2355565544


Q ss_pred             HHh-------cCCccEEEECCCC
Q 019199          239 KAL-------GKSLDFIIDTASG  254 (344)
Q Consensus       239 ~~~-------~~~~dvvid~~g~  254 (344)
                      .+.       .+++|+++++.|.
T Consensus        93 ~~~~~~~~~~~g~id~lvnnAg~  115 (280)
T 3pgx_A           93 RELVADGMEQFGRLDVVVANAGV  115 (280)
T ss_dssp             HHHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            332       2589999999884

>1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A*

Probab=97.16  E-value=0.004  Score=53.49  Aligned_cols=75  Identities=20%  Similarity=0.133  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++ +.++.+.+.++   .+...   ..|..+.+.+.+.       .++
T Consensus         6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (261)
T 1gee_A            6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 99999999998889999999998 66655443222   34322   2244555443332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        86 id~li~~Ag~   95 (261)
T 1gee_A           86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A*

Probab=97.16  E-value=0.0019  Score=55.72  Aligned_cols=75  Identities=17%  Similarity=0.133  Sum_probs=56.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++++...   ..|..+.+.+.+.       .+++|++
T Consensus        11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l   90 (265)
T 2o23_A           11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA   90 (265)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence            5678999998 999999999999899999999999887776656666432   2344555444332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      |++.|.
T Consensus        91 i~~Ag~   96 (265)
T 2o23_A           91 VNCAGI   96 (265)
T ss_dssp             EECCCC
T ss_pred             EECCcc
Confidence            998873

>1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A*

Probab=97.15  E-value=0.0031  Score=53.93  Aligned_cols=75  Identities=20%  Similarity=0.281  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .+...   ..|..+.+.+.+.       .+++
T Consensus        10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   89 (255)
T 1fmc_A           10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV   89 (255)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999998 9999999999988999999999998766544333   34322   2344555444332       2589


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        90 d~vi~~Ag~   98 (255)
T 1fmc_A           90 DILVNNAGG   98 (255)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A}

Probab=97.15  E-value=0.00052  Score=58.37  Aligned_cols=95  Identities=11%  Similarity=0.135  Sum_probs=67.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      .+|||+|+ |.+|.++++.+...| ++|+++++++++...+ ...+.. ...|..+.+.+.+.-.++|++|.+.+...  
T Consensus        24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~-~~~~~~~~~~Dl~d~~~~~~~~~~~D~vv~~a~~~~~~  102 (236)
T 3qvo_A           24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKP-YPTNSQIIMGDVLNHAALKQAMQGQDIVYANLTGEDLD  102 (236)
T ss_dssp             EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSS-CCTTEEEEECCTTCHHHHHHHHTTCSEEEEECCSTTHH
T ss_pred             cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhccc-ccCCcEEEEecCCCHHHHHHHhcCCCEEEEcCCCCchh
Confidence            57999997 999999999999999 7999999998765432 111222 12355667777776678999999888643  


Q ss_pred             -hHHHHHHhccc--CCEEEEEcCC
Q 019199          257 -PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       257 -~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                       ..+.+++.++.  .++||.++..
T Consensus       103 ~~~~~~~~~~~~~~~~~iV~iSS~  126 (236)
T 3qvo_A          103 IQANSVIAAMKACDVKRLIFVLSL  126 (236)
T ss_dssp             HHHHHHHHHHHHTTCCEEEEECCC
T ss_pred             HHHHHHHHHHHHcCCCEEEEEecc
Confidence             13445555544  3689988764

>2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ...

Probab=97.14  E-value=0.0033  Score=54.50  Aligned_cols=75  Identities=15%  Similarity=0.131  Sum_probs=53.6

Q ss_pred             CCCEEEEEC---CChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhCCCc---EEEeCCCHHHHHHh-------cC--
Q 019199          180 PGKSLGVIG---LGGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLLGAD---KFVVSSDLEQMKAL-------GK--  243 (344)
Q Consensus       180 ~g~~vlI~G---ag~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~--  243 (344)
                      .+.++||+|   +|++|.+.++.+...|++|++++++.++ .+.+.++++..   ...|-.+.+.+.+.       .+  
T Consensus         6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~   85 (269)
T 2h7i_A            6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG   85 (269)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            467899998   4899999999998899999999998766 35554555532   22355565544332       14  


Q ss_pred             -CccEEEECCCC
Q 019199          244 -SLDFIIDTASG  254 (344)
Q Consensus       244 -~~dvvid~~g~  254 (344)
                       ++|+++++.|.
T Consensus        86 ~~iD~lv~nAg~   97 (269)
T 2h7i_A           86 NKLDGVVHSIGF   97 (269)
T ss_dssp             CCEEEEEECCCC
T ss_pred             CCceEEEECCcc
Confidence             79999998873

>3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E

Probab=97.14  E-value=0.0011  Score=56.78  Aligned_cols=76  Identities=22%  Similarity=0.255  Sum_probs=57.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++..   ...|-.+.+.+.+.       .+++|+
T Consensus         7 l~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~   86 (248)
T 3op4_A            7 LEGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDI   86 (248)
T ss_dssp             CTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            35788999987 99999999999999999999999988877765555532   23455665544332       258999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        87 lv~nAg~   93 (248)
T 3op4_A           87 LVNNAGI   93 (248)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999884

>4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A*

Probab=97.14  E-value=0.0034  Score=54.19  Aligned_cols=98  Identities=16%  Similarity=0.019  Sum_probs=66.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH--HHhCCCc---EEEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA--LSLLGAD---KFVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~--~~~~g~~---~~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++.++++++.+.+  .++.+..   ...|-.+++.+++.       -+++|
T Consensus         6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD   85 (258)
T 4gkb_A            6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD   85 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            5789999997 8999999988888999999999887754332  1233422   23355565444332       26899


Q ss_pred             EEEECCCCc------------------------hhHHHHHHhc-ccCCEEEEEcCC
Q 019199          247 FIIDTASGD------------------------HPFDAYMSLL-KVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g~~------------------------~~~~~~~~~l-~~~G~iv~~g~~  277 (344)
                      +++++.|..                        ...+.++..| +.+|+||.++..
T Consensus        86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~  141 (258)
T 4gkb_A           86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSK  141 (258)
T ss_dssp             EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCT
T ss_pred             EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeeh
Confidence            999998842                        1122334445 347999999765

>3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1}

Probab=97.14  E-value=0.0028  Score=54.76  Aligned_cols=99  Identities=15%  Similarity=0.089  Sum_probs=65.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHh---CCCcE---EEeCCCHHHHHHh-------
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSL---LGADK---FVVSSDLEQMKAL-------  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------  241 (344)
                      -.|.++||+|+ +++|.+.+..+...|++|+++++...   +.+.+.++   .|...   ..|-.+.+.+.+.       
T Consensus         9 l~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~   88 (262)
T 3ksu_A            9 LKNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKE   88 (262)
T ss_dssp             CTTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHH
Confidence            35788999998 99999999999889999999876533   33333222   24322   2355565544332       


Q ss_pred             cCCccEEEECCCCc----------h---------------hHHHHHHhcccCCEEEEEcCC
Q 019199          242 GKSLDFIIDTASGD----------H---------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       242 ~~~~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+++|+++++.|..          .               ..+.++..++++|+++.++..
T Consensus        89 ~g~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~isS~  149 (262)
T 3ksu_A           89 FGKVDIAINTVGKVLKKPIVETSEAEFDAMDTINNKVAYFFIKQAAKHMNPNGHIITIATS  149 (262)
T ss_dssp             HCSEEEEEECCCCCCSSCGGGCCHHHHHHHHHHHHHHHHHHHHHHHTTEEEEEEEEEECCC
T ss_pred             cCCCCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHhhcCCCEEEEEech
Confidence            26899999998832          1               122334445678999999765

>3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes}

Probab=97.13  E-value=0.004  Score=51.81  Aligned_cols=91  Identities=20%  Similarity=0.237  Sum_probs=64.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCCHHHHHHhcCCccEEEECCCCc-----
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKALGKSLDFIIDTASGD-----  255 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~~g~~-----  255 (344)
                      +|||+|+ |.+|..+++.+...|.+|+++++++++...+ . .+...+ .|..+.+.  +...++|+||.+.|..     
T Consensus         2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~-~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   77 (221)
T 3ew7_A            2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQT-H-KDINILQKDIFDLTL--SDLSDQNVVVDAYGISPDEAE   77 (221)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHH-C-SSSEEEECCGGGCCH--HHHTTCSEEEECCCSSTTTTT
T ss_pred             eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhc-c-CCCeEEeccccChhh--hhhcCCCEEEECCcCCccccc
Confidence            5899998 9999999999999999999999998877655 2 333322 12223222  3336799999999863     


Q ss_pred             ---hhHHHHHHhcccC--CEEEEEcCC
Q 019199          256 ---HPFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       256 ---~~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                         .....+++.++..  ++++.++..
T Consensus        78 ~~~~~~~~l~~a~~~~~~~~~v~~SS~  104 (221)
T 3ew7_A           78 KHVTSLDHLISVLNGTVSPRLLVVGGA  104 (221)
T ss_dssp             SHHHHHHHHHHHHCSCCSSEEEEECCC
T ss_pred             hHHHHHHHHHHHHHhcCCceEEEEecc
Confidence               2245666666554  788888654

>4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1}

Probab=97.13  E-value=0.0026  Score=55.19  Aligned_cols=96  Identities=17%  Similarity=0.085  Sum_probs=72.8

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ..+||+...+...+.....--.|.+++|+|. +.+|..+++++...|++|+++.+....++.                  
T Consensus       139 ~~~PcTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~~L~~------------------  200 (286)
T 4a5o_A          139 LLRPCTPKGIMTLLASTGADLYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTRDLAD------------------  200 (286)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCSCHHH------------------
T ss_pred             CCCCCCHHHHHHHHHHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCcCHHH------------------
Confidence            3567777777777777665568999999998 569999999999999999998765433322                  


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         ..+.+|++|.++|.+..+.  -+.++++..++++|..
T Consensus       201 ---~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~  235 (286)
T 4a5o_A          201 ---HVSRADLVVVAAGKPGLVK--GEWIKEGAIVIDVGIN  235 (286)
T ss_dssp             ---HHHTCSEEEECCCCTTCBC--GGGSCTTCEEEECCSC
T ss_pred             ---HhccCCEEEECCCCCCCCC--HHHcCCCeEEEEeccc
Confidence               2245899999999775332  2568999999999865

>1a4i_A Methylenetetrahydrofolate dehydrogenase / methenyltetrahydrofolate cyclohydrolase...; THF, bifunctional, oxidoreductase; HET: NDP; 1.50A {Homo sapiens} SCOP: c.2.1.7 c.58.1.2 PDB: 1dia_A* 1dib_A* 1dig_A*

Probab=97.13  E-value=0.002  Score=56.29  Aligned_cols=96  Identities=11%  Similarity=0.077  Sum_probs=71.9

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ..+||+.......+.....--.|.+++|+|.| .+|.-+++++...|++|+++.+..+.+.                   
T Consensus       143 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~-------------------  203 (301)
T 1a4i_A          143 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLD-------------------  203 (301)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHH-------------------
T ss_pred             CccCchHHHHHHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHhCCCeEEEEECCcccHH-------------------
Confidence            35677766666667666654689999999996 6899999999999999999875543332                   


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        +..+.+|++|.++|.+..+.  -++++++..++++|..
T Consensus       204 --~~~~~ADIVI~Avg~p~~I~--~~~vk~GavVIDVgi~  239 (301)
T 1a4i_A          204 --EEVNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  239 (301)
T ss_dssp             --HHHTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             --HHhccCCEEEECCCCcccCC--HHHcCCCcEEEEccCC
Confidence              22356899999999875322  2457899999999865

>1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A*

Probab=97.13  E-value=0.0018  Score=55.93  Aligned_cols=75  Identities=21%  Similarity=0.131  Sum_probs=55.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++++..   ...|-.+.+.+.+.       .+++|++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l   85 (260)
T 1nff_A            6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4678999998 99999999998889999999999988776664555422   12355555544332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        86 v~~Ag~   91 (260)
T 1nff_A           86 VNNAGI   91 (260)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999873

>3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A*

Probab=97.13  E-value=0.0036  Score=57.89  Aligned_cols=96  Identities=13%  Similarity=0.221  Sum_probs=74.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchh
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHP  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~  257 (344)
                      .+.+|+|+|.|.+|+.+++.++..|..|++++.++++.+.+ +..|...++ |..+++.+.+.+ .++|+++-+++....
T Consensus         3 ~~~~viIiG~Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~-~~~g~~vi~GDat~~~~L~~agi~~A~~viv~~~~~~~   81 (413)
T 3l9w_A            3 HGMRVIIAGFGRFGQITGRLLLSSGVKMVVLDHDPDHIETL-RKFGMKVFYGDATRMDLLESAGAAKAEVLINAIDDPQT   81 (413)
T ss_dssp             -CCSEEEECCSHHHHHHHHHHHHTTCCEEEEECCHHHHHHH-HHTTCCCEESCTTCHHHHHHTTTTTCSEEEECCSSHHH
T ss_pred             CCCeEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHH-HhCCCeEEEcCCCCHHHHHhcCCCccCEEEECCCChHH
Confidence            34679999999999999999999999999999999999888 577865433 556677777764 789999999987542


Q ss_pred             ---HHHHHHhcccCCEEEEEcC
Q 019199          258 ---FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~  276 (344)
                         +....+.+.|..+++....
T Consensus        82 n~~i~~~ar~~~p~~~Iiara~  103 (413)
T 3l9w_A           82 NLQLTEMVKEHFPHLQIIARAR  103 (413)
T ss_dssp             HHHHHHHHHHHCTTCEEEEEES
T ss_pred             HHHHHHHHHHhCCCCeEEEEEC
Confidence               3344455667778876654

>3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A*

Probab=97.12  E-value=0.0018  Score=56.64  Aligned_cols=75  Identities=25%  Similarity=0.201  Sum_probs=57.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE---EeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---VVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|.++||+|+ +++|.+.+..+...|++|++++++.++.+.+.++.+....   .|-.+.+.+.+.       .+++|++
T Consensus         4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l   83 (281)
T 3zv4_A            4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL   83 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            4688999998 9999999999999999999999999988877666664332   244555443322       2679999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        84 vnnAg~   89 (281)
T 3zv4_A           84 IPNAGI   89 (281)
T ss_dssp             ECCCCC
T ss_pred             EECCCc
Confidence            999874

>1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3

Probab=97.12  E-value=0.0016  Score=61.06  Aligned_cols=91  Identities=18%  Similarity=0.176  Sum_probs=70.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.|.+|.|+|.|.+|..+++.++.+|++|++.+++..+...+ ...|.. +   .   .+.+.....|+++.+.+....+
T Consensus       255 l~GktVgIIG~G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a-~~~g~~-~---~---~l~ell~~aDiVi~~~~t~~lI  326 (479)
T 1v8b_A          255 ISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFN-V---V---TLDEIVDKGDFFITCTGNVDVI  326 (479)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCE-E---C---CHHHHTTTCSEEEECCSSSSSB
T ss_pred             cCCCEEEEEeeCHHHHHHHHHHHhCcCEEEEEeCChhhHHHH-HHcCCE-e---c---CHHHHHhcCCEEEECCChhhhc
Confidence            578999999999999999999999999999999988765444 355653 1   1   2334456799999987765533


Q ss_pred             -HHHHHhcccCCEEEEEcCC
Q 019199          259 -DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 -~~~~~~l~~~G~iv~~g~~  277 (344)
                       ...++.++++..++.+|..
T Consensus       327 ~~~~l~~MK~gailiNvgrg  346 (479)
T 1v8b_A          327 KLEHLLKMKNNAVVGNIGHF  346 (479)
T ss_dssp             CHHHHTTCCTTCEEEECSST
T ss_pred             CHHHHhhcCCCcEEEEeCCC
Confidence             4678889999999988754

>1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2

Probab=97.11  E-value=0.0039  Score=52.90  Aligned_cols=74  Identities=22%  Similarity=0.247  Sum_probs=55.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-CCcE-EEeCCCHHHHHHhc---CCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-GADK-FVVSSDLEQMKALG---KSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~~-~v~~~~~~~~~~~~---~~~dvvid~~g  253 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++. +... ..|..+.+.+.+..   +++|++|++.|
T Consensus         6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~id~vi~~Ag   85 (244)
T 1cyd_A            6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   85 (244)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCHHHHHHHHHHcCCCCEEEECCc
Confidence            4678999998 99999999999889999999999988776664444 3222 23555665555542   46899999988

>3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A*

Probab=97.11  E-value=0.0026  Score=54.93  Aligned_cols=75  Identities=20%  Similarity=0.232  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++    +...   ..|..+.+.+.+.       .++
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (263)
T 3ai3_A            6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG   85 (263)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 99999999999889999999999987765543333    4322   2355555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        86 id~lv~~Ag~   95 (263)
T 3ai3_A           86 ADILVNNAGT   95 (263)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum}

Probab=97.11  E-value=0.0012  Score=55.56  Aligned_cols=98  Identities=17%  Similarity=0.101  Sum_probs=68.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC------CeEEEEeCCchhHHHHHHhC---C-------CcEEEeCCCHHHHH-
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG------LNVTVLSTSTSKKEEALSLL---G-------ADKFVVSSDLEQMK-  239 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g------~~V~~~~~~~~~~~~~~~~~---g-------~~~~v~~~~~~~~~-  239 (344)
                      .++++++||.+|+|. |..+..+++..+      .+|+.++.+++..+.+++.+   +       .-.++..+..+... 
T Consensus        77 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~  155 (227)
T 2pbf_A           77 VLKPGSRAIDVGSGS-GYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIYQVNEE  155 (227)
T ss_dssp             TSCTTCEEEEESCTT-SHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGGGCCHH
T ss_pred             hCCCCCEEEEECCCC-CHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChHhcccc
Confidence            358899999999976 888889998876      59999999988776664332   2       11222222111110 


Q ss_pred             --HhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          240 --ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       240 --~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                        .....||+|+........+..+.+.|+++|+++..-
T Consensus       156 ~~~~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~  193 (227)
T 2pbf_A          156 EKKELGLFDAIHVGASASELPEILVDLLAENGKLIIPI  193 (227)
T ss_dssp             HHHHHCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEE
T ss_pred             cCccCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence              113579999987766666789999999999998763

>3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A*

Probab=97.11  E-value=0.004  Score=53.63  Aligned_cols=75  Identities=21%  Similarity=0.212  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++ .++.++.+.+.++   .|...   ..|-.+.+.+++.       .++
T Consensus         3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   82 (258)
T 3oid_A            3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR   82 (258)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 999999999999999999886 7777665554333   34332   2345555444332       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        83 id~lv~nAg~   92 (258)
T 3oid_A           83 LDVFVNNAAS   92 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens}

Probab=97.11  E-value=0.0024  Score=55.14  Aligned_cols=75  Identities=16%  Similarity=0.117  Sum_probs=55.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c-EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D-KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++..  . ...|..+.+.+.+.       .+++|++
T Consensus        11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l   90 (263)
T 3ak4_A           11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL   90 (263)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            4688999998 9999999999988999999999998877766555532  1 22355555544332       2579999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        91 v~~Ag~   96 (263)
T 3ak4_A           91 CANAGV   96 (263)
T ss_dssp             EECCCC
T ss_pred             EECCCc
Confidence            999873

>2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae}

Probab=97.10  E-value=0.0018  Score=60.95  Aligned_cols=96  Identities=16%  Similarity=0.110  Sum_probs=66.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      .+.+|+|+|+|++|.+++..+... +.+|++++++.++.+.+.+..+... .+|..+.+.+.+...++|+|+++++....
T Consensus        22 ~~k~VlIiGAGgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~~~DvVIn~tp~~~~  101 (467)
T 2axq_A           22 MGKNVLLLGSGFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLADNDVVISLIPYTFH  101 (467)
T ss_dssp             -CEEEEEECCSTTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHHTSSEEEECSCGGGH
T ss_pred             CCCEEEEECChHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHcCCCEEEECCchhhh
Confidence            456799999999999998888877 6699999999888776644434432 34555555555444579999999986532


Q ss_pred             HHHHHHhcccCCEEEEEc
Q 019199          258 FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g  275 (344)
                      ......+++.+-.++...
T Consensus       102 ~~v~~a~l~~g~~vvd~~  119 (467)
T 2axq_A          102 PNVVKSAIRTKTDVVTSS  119 (467)
T ss_dssp             HHHHHHHHHHTCEEEECS
T ss_pred             HHHHHHHHhcCCEEEEee
Confidence            333445667777776654

>1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A

Probab=97.10  E-value=0.0032  Score=53.75  Aligned_cols=75  Identities=20%  Similarity=0.136  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC--Cc-E--EEeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG--AD-K--FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g--~~-~--~v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++.  .. .  ..|..+.+.+.+.       .+++|
T Consensus         5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id   84 (251)
T 1zk4_A            5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS   84 (251)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence            4678999998 999999999998899999999999887665544443  11 1  2344555444332       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|++.|.
T Consensus        85 ~li~~Ag~   92 (251)
T 1zk4_A           85 TLVNNAGI   92 (251)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum}

Probab=97.09  E-value=0.0042  Score=54.08  Aligned_cols=76  Identities=17%  Similarity=0.119  Sum_probs=53.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcEE---EeCCCHHHHHHh------cCCc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKF---VVSSDLEQMKAL------GKSL  245 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~---v~~~~~~~~~~~------~~~~  245 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++   .+....   .|-.+.+.+.+.      .+++
T Consensus        31 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~g~i  110 (275)
T 4imr_A           31 LRGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAIAPV  110 (275)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHhCCC
Confidence            35788999987 9999999999989999999999988765554333   343222   233443322221      1679


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus       111 D~lvnnAg~  119 (275)
T 4imr_A          111 DILVINASA  119 (275)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0

Probab=97.09  E-value=0.0033  Score=54.90  Aligned_cols=99  Identities=18%  Similarity=0.101  Sum_probs=65.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HhCCCcE---EEeCCCHHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS------------TSKKEEAL---SLLGADK---FVVSSDLEQMK  239 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~------------~~~~~~~~---~~~g~~~---~v~~~~~~~~~  239 (344)
                      -.|.++||+|+ +++|.+.+..+...|++|++++++            .++.+.+.   +..+...   ..|-.+.+.+.
T Consensus         8 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   87 (287)
T 3pxx_A            8 VQDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVS   87 (287)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHH
Confidence            35789999998 999999999999999999999876            44333322   2334332   23555555443


Q ss_pred             Hh-------cCCccEEEECCCCch-----------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          240 AL-------GKSLDFIIDTASGDH-----------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       240 ~~-------~~~~dvvid~~g~~~-----------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.       .+++|+++++.|...                       ..+.++..++.+|+++.++..
T Consensus        88 ~~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  155 (287)
T 3pxx_A           88 RELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSV  155 (287)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCH
T ss_pred             HHHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccc
Confidence            32       258999999988421                       122344455678999998754

>1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2

Probab=97.09  E-value=0.0027  Score=55.03  Aligned_cols=76  Identities=28%  Similarity=0.246  Sum_probs=55.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+++    |...   ..|..+.+.+.+.       .+
T Consensus        19 l~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g   98 (267)
T 1vl8_A           19 LRGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFG   98 (267)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999998 99999999999889999999999988765543333    5332   2355555444332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus        99 ~iD~lvnnAg~  109 (267)
T 1vl8_A           99 KLDTVVNAAGI  109 (267)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae}

Probab=97.08  E-value=0.0062  Score=52.26  Aligned_cols=74  Identities=19%  Similarity=0.172  Sum_probs=53.3

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      |.++||+|+ +++|.+.++.+...  |++|+.+++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|+
T Consensus         2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~   81 (254)
T 3kzv_A            2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS   81 (254)
T ss_dssp             CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence            578899997 99999988766555  5789999999988877766666432   2255555544332       268999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        82 lvnnAg~   88 (254)
T 3kzv_A           82 LVANAGV   88 (254)
T ss_dssp             EEEECCC
T ss_pred             EEECCcc
Confidence            9998874

>3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti}

Probab=97.08  E-value=0.0031  Score=54.66  Aligned_cols=99  Identities=18%  Similarity=0.180  Sum_probs=64.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      ..+.++||+|+ +++|.+.++.+...|++|++++ +++++.+.+.   +..|...   ..|-.+.+.+.+.       .+
T Consensus        25 ~~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  104 (267)
T 3u5t_A           25 ETNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFG  104 (267)
T ss_dssp             --CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            45788999998 9999999988888899998874 4444444332   2344332   2355555544332       26


Q ss_pred             CccEEEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.|..                         ...+.++..++.+|+++.++..
T Consensus       105 ~iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~  163 (267)
T 3u5t_A          105 GVDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTS  163 (267)
T ss_dssp             CEEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCT
T ss_pred             CCCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeCh
Confidence            899999998742                         1133455556778999999765

>1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2

Probab=97.08  E-value=0.0027  Score=54.90  Aligned_cols=75  Identities=27%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++ +.++.+.+.+   ..+...   ..|..+.+.+.+.       .++
T Consensus        20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   99 (274)
T 1ja9_A           20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG   99 (274)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 99999999999889999999998 6555443322   335432   2355555544332       157


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus       100 ~d~vi~~Ag~  109 (274)
T 1ja9_A          100 LDFVMSNSGM  109 (274)
T ss_dssp             EEEEECCCCC
T ss_pred             CCEEEECCCC
Confidence            9999998873

>3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str}

Probab=97.08  E-value=0.0022  Score=55.26  Aligned_cols=75  Identities=19%  Similarity=0.212  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|-.+.+.+.+.       .+++
T Consensus         5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   84 (257)
T 3imf_A            5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI   84 (257)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999987 99999999999899999999999988877664443   3222   2355555444332       2589


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        85 d~lv~nAg~   93 (257)
T 3imf_A           85 DILINNAAG   93 (257)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp}

Probab=97.08  E-value=0.0013  Score=55.07  Aligned_cols=92  Identities=13%  Similarity=0.085  Sum_probs=65.6

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCC-HHHHHHhcCCccEEEECCCCch---
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSD-LEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~-~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      +|||+|+ |.+|..+++.+...|.+|+++++++++....   .+.. ...|..+ .+.+.+.-.++|+||.+.+...   
T Consensus         2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~d~vi~~ag~~~~~~   78 (219)
T 3dqp_A            2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNVKAVHFDVDWTPEEMAKQLHGMDAIINVSGSGGKSL   78 (219)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTEEEEECCTTSCHHHHHTTTTTCSEEEECCCCTTSSC
T ss_pred             eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCceEEEecccCCHHHHHHHHcCCCEEEECCcCCCCCc
Confidence            5899997 9999999999998999999999998765322   1222 1235566 6677776788999999998532   


Q ss_pred             ------hHHHHHHhcccC--CEEEEEcCC
Q 019199          257 ------PFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       257 ------~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                            ....+++.++..  ++++.++..
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~iv~~SS~  107 (219)
T 3dqp_A           79 LKVDLYGAVKLMQAAEKAEVKRFILLSTI  107 (219)
T ss_dssp             CCCCCHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             EeEeHHHHHHHHHHHHHhCCCEEEEECcc
Confidence                  133455555443  589988765

>3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp}

Probab=97.07  E-value=0.0017  Score=56.75  Aligned_cols=94  Identities=14%  Similarity=0.040  Sum_probs=67.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc----
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD----  255 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~----  255 (344)
                      +|||+|+ |.+|..+++.+... |.+|+++++++++...+ ...+... ..|..+.+.+.+...++|+||.+.+..    
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~-~~~~v~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~~   80 (289)
T 3e48_A            2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDD-WRGKVSVRQLDYFNQESMVEAFKGMDTVVFIPSIIHPSF   80 (289)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGG-GBTTBEEEECCTTCHHHHHHHTTTCSEEEECCCCCCSHH
T ss_pred             EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHh-hhCCCEEEEcCCCCHHHHHHHHhCCCEEEEeCCCCccch
Confidence            4899998 99999999988877 88999999998875443 2334332 335667777777778999999998852    


Q ss_pred             ---hhHHHHHHhcccC--CEEEEEcCC
Q 019199          256 ---HPFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       256 ---~~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                         .....+++.++..  ++++.++..
T Consensus        81 ~~~~~~~~l~~aa~~~gv~~iv~~Ss~  107 (289)
T 3e48_A           81 KRIPEVENLVYAAKQSGVAHIIFIGYY  107 (289)
T ss_dssp             HHHHHHHHHHHHHHHTTCCEEEEEEES
T ss_pred             hhHHHHHHHHHHHHHcCCCEEEEEccc
Confidence               1234556665544  488887654

>1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2

Probab=97.07  E-value=0.0031  Score=54.80  Aligned_cols=75  Identities=20%  Similarity=0.208  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------c-CC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------G-KS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~-~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .+...   ..|-.+.+.+.+.       - ++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   99 (273)
T 1ae1_A           20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   99 (273)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999999999999999998776554333   24332   2345555444332       2 67


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       100 id~lv~nAg~  109 (273)
T 1ae1_A          100 LNILVNNAGV  109 (273)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999874

>3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti}

Probab=97.07  E-value=0.0013  Score=56.55  Aligned_cols=75  Identities=20%  Similarity=0.165  Sum_probs=49.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l   85 (257)
T 3tpc_A            6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL   85 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence            5788999998 999999999998999999999999888766655665321   2344555443332       2589999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        86 v~nAg~   91 (257)
T 3tpc_A           86 VNCAGT   91 (257)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A

Probab=97.07  E-value=0.0028  Score=54.65  Aligned_cols=93  Identities=11%  Similarity=0.057  Sum_probs=69.8

Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHH
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQM  238 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~  238 (344)
                      .+||+.......+....  -.|.+++|+|.| .+|..+++++...|++|+++.+....++..                  
T Consensus       131 ~~PcTp~gv~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t~~L~~~------------------  190 (276)
T 3ngx_A          131 LVPATPRAVIDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKTKDIGSM------------------  190 (276)
T ss_dssp             SCCHHHHHHHHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSCHHHH------------------
T ss_pred             CCCCcHHHHHHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCcccHHHh------------------
Confidence            46777667777777666  689999999985 699999999999999999987654433322                  


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         .+.+|++|.++|.+..+..  ..++++..++++|..
T Consensus       191 ---~~~ADIVI~Avg~p~~I~~--~~vk~GavVIDvgi~  224 (276)
T 3ngx_A          191 ---TRSSKIVVVAVGRPGFLNR--EMVTPGSVVIDVGIN  224 (276)
T ss_dssp             ---HHHSSEEEECSSCTTCBCG--GGCCTTCEEEECCCE
T ss_pred             ---hccCCEEEECCCCCccccH--hhccCCcEEEEeccC
Confidence               2348899999987653322  567899888888754

>1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A*

Probab=97.06  E-value=0.0049  Score=53.20  Aligned_cols=75  Identities=15%  Similarity=0.122  Sum_probs=51.8

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCc---hhHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTST---SKKEEALSLLGADK--FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~---~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+   |++|.+.++.+...|++|+++++++   +..+.+.+..+...  ..|-.+.+.+.+.       .++
T Consensus         8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   87 (265)
T 1qsg_A            8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK   87 (265)
T ss_dssp             TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred             CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   6999999999988999999999886   33344433344322  2355565544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        88 iD~lv~~Ag~   97 (265)
T 1qsg_A           88 FDGFVHSIGF   97 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida}

Probab=97.05  E-value=0.0034  Score=54.63  Aligned_cols=92  Identities=15%  Similarity=0.118  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC--cEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA--DKFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      -.+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++.  ...+...+..   .  .++|++|++++..
T Consensus       118 l~~k~~lvlGaGg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~~l~---~--~~~DivInaTp~g  192 (272)
T 3pwz_A          118 LRNRRVLLLGAGGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYEALE---G--QSFDIVVNATSAS  192 (272)
T ss_dssp             CTTSEEEEECCSHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSGGGT---T--CCCSEEEECSSGG
T ss_pred             ccCCEEEEECccHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHHHhc---c--cCCCEEEECCCCC
Confidence            468899999999999999999888997 999999999988777667663  2233322211   1  6799999998743


Q ss_pred             hhH---HHHHHhcccCCEEEEEc
Q 019199          256 HPF---DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       256 ~~~---~~~~~~l~~~G~iv~~g  275 (344)
                      ..-   ..-...++++..++++-
T Consensus       193 m~~~~~~i~~~~l~~~~~V~Dlv  215 (272)
T 3pwz_A          193 LTADLPPLPADVLGEAALAYELA  215 (272)
T ss_dssp             GGTCCCCCCGGGGTTCSEEEESS
T ss_pred             CCCCCCCCCHHHhCcCCEEEEee
Confidence            200   00123456666666553

>2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A*

Probab=97.05  E-value=0.0032  Score=54.27  Aligned_cols=75  Identities=20%  Similarity=0.172  Sum_probs=54.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------c-CC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------G-KS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~-~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .|...   ..|-.+.+.+.+.       - ++
T Consensus         8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~   87 (260)
T 2ae2_A            8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   87 (260)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999988999999999998876554333   24322   2355555444332       2 67


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        88 id~lv~~Ag~   97 (260)
T 2ae2_A           88 LNILVNNAGI   97 (260)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A*

Probab=97.05  E-value=0.0014  Score=53.93  Aligned_cols=95  Identities=16%  Similarity=0.105  Sum_probs=65.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      .++||+|+ |.+|..+++.+...|.+|+++++++++.... ...+... ..|..+.+.+.+...++|++|.+.+...   
T Consensus         4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~vi~~a~~~~~~~   82 (206)
T 1hdo_A            4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDLS   82 (206)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCCS
T ss_pred             CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhcccc-cCCceEEEEecCCCHHHHHHHHcCCCEEEECccCCCCCC
Confidence            57999998 9999999999988999999999987764321 1112221 2345566666666678999999988532   


Q ss_pred             -------hHHHHHHhccc--CCEEEEEcCC
Q 019199          257 -------PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       257 -------~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                             ....+++.++.  -++++.++..
T Consensus        83 ~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~  112 (206)
T 1hdo_A           83 PTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (206)
T ss_dssp             CCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             ccchHHHHHHHHHHHHHHhCCCeEEEEeee
Confidence                   13444444433  3588888654

>2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A*

Probab=97.04  E-value=0.0067  Score=52.67  Aligned_cols=75  Identities=20%  Similarity=0.142  Sum_probs=52.4

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCC-c-EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGA-D-KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~-~-~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+   |++|.+.++.+...|++|++++++++   ..+.+.+..+. . ...|-.+.+.+.+.       .++
T Consensus         5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   84 (275)
T 2pd4_A            5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS   84 (275)
T ss_dssp             TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   69999999999889999999998875   34444333442 2 22355565544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        85 id~lv~nAg~   94 (275)
T 2pd4_A           85 LDFIVHSVAF   94 (275)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999874

>3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A*

Probab=97.04  E-value=0.0029  Score=55.82  Aligned_cols=102  Identities=21%  Similarity=0.238  Sum_probs=70.5

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d  246 (344)
                      +.....++++++||-+|+|. |..+..+++..|++|++++.+++..+.+++.   .|..  ..+...+...   ..+.+|
T Consensus        64 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~---~~~~fD  139 (302)
T 3hem_A           64 ALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWEE---FDEPVD  139 (302)
T ss_dssp             HHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEECCGGG---CCCCCS
T ss_pred             HHHHcCCCCcCEEEEeeccC-cHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECCHHH---cCCCcc
Confidence            33444458999999999975 8888899998889999999999877766433   2321  1122222211   257799


Q ss_pred             EEEECCCC---------------chhHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDTASG---------------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g~---------------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+....-               ...+..+.+.|+|+|+++.....
T Consensus       140 ~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  185 (302)
T 3hem_A          140 RIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT  185 (302)
T ss_dssp             EEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred             EEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence            99864321               14478888999999999987644

>3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae}

Probab=97.04  E-value=0.0063  Score=53.35  Aligned_cols=75  Identities=17%  Similarity=0.205  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCC---eEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHHh------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGL---NVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKAL------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~---~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~~------  241 (344)
                      .|.++||+|+ +++|.+.+..+...|+   +|++++++.++.+.+.+++     +...   ..|-.+.+.+.+.      
T Consensus        32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~  111 (287)
T 3rku_A           32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ  111 (287)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred             CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence            4678999998 9999998877766666   9999999988776654443     3222   2344555444332      


Q ss_pred             -cCCccEEEECCCC
Q 019199          242 -GKSLDFIIDTASG  254 (344)
Q Consensus       242 -~~~~dvvid~~g~  254 (344)
                       .+++|+++++.|.
T Consensus       112 ~~g~iD~lVnnAG~  125 (287)
T 3rku_A          112 EFKDIDILVNNAGK  125 (287)
T ss_dssp             GGCSCCEEEECCCC
T ss_pred             hcCCCCEEEECCCc
Confidence             1579999999883

>2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A*

Probab=97.04  E-value=0.0043  Score=53.02  Aligned_cols=75  Identities=23%  Similarity=0.234  Sum_probs=54.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|-.+.+.+.+.       .+++
T Consensus         6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i   85 (247)
T 2jah_A            6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL   85 (247)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 99999999999889999999999988766553332   4322   2355555444332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        86 d~lv~nAg~   94 (247)
T 2jah_A           86 DILVNNAGI   94 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2

Probab=97.04  E-value=0.0061  Score=53.28  Aligned_cols=75  Identities=19%  Similarity=0.208  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+++..+...|++|+++++++++.+.+.++   .+...   ..|..+.+.+.+.       .+++
T Consensus        43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i  122 (285)
T 2c07_A           43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV  122 (285)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999998 9999999998888899999988887766544333   24332   2345555544332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus       123 d~li~~Ag~  131 (285)
T 2c07_A          123 DILVNNAGI  131 (285)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A*

Probab=97.04  E-value=0.0053  Score=51.87  Aligned_cols=74  Identities=16%  Similarity=0.191  Sum_probs=55.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcE---EEeCCCHHHHHHhc-------CCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADK---FVVSSDLEQMKALG-------KSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~v~~~~~~~~~~~~-------~~~  245 (344)
                      +.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++    .+...   ..|-.+.+.+.+..       +++
T Consensus         2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~i   81 (235)
T 3l77_A            2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERFGDV   81 (235)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHHSSC
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhcCCC
Confidence            578999998 9999999999999999999999998876655333    34332   23556666555432       579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        82 d~li~~Ag~   90 (235)
T 3l77_A           82 DVVVANAGL   90 (235)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCcc
Confidence            999999874

>3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0

Probab=97.03  E-value=0.0059  Score=53.11  Aligned_cols=76  Identities=18%  Similarity=0.229  Sum_probs=52.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-------------CchhHHHHHH---hCCCcE---EEeCCCHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-------------STSKKEEALS---LLGADK---FVVSSDLEQM  238 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-------------~~~~~~~~~~---~~g~~~---~v~~~~~~~~  238 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++             +.++.+...+   ..+...   ..|..+.+.+
T Consensus         9 l~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v   88 (277)
T 3tsc_A            9 LEGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRL   88 (277)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHH
T ss_pred             cCCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHH
Confidence            35788999998 99999999999999999999987             4444433322   334332   2355555544


Q ss_pred             HHh-------cCCccEEEECCCC
Q 019199          239 KAL-------GKSLDFIIDTASG  254 (344)
Q Consensus       239 ~~~-------~~~~dvvid~~g~  254 (344)
                      .+.       .+++|+++++.|.
T Consensus        89 ~~~~~~~~~~~g~id~lvnnAg~  111 (277)
T 3tsc_A           89 RKVVDDGVAALGRLDIIVANAGV  111 (277)
T ss_dssp             HHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHcCCCCEEEECCCC
Confidence            332       2679999999874

>2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A*

Probab=97.02  E-value=0.0067  Score=52.25  Aligned_cols=75  Identities=23%  Similarity=0.275  Sum_probs=52.0

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCcEE--EeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADKF--VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+   |++|.+.++.+...|++|++++++++   ..+.+.++.+....  .|-.+.+.+.+.       .++
T Consensus         7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (261)
T 2wyu_A            7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (261)
T ss_dssp             TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   69999999888888999999998875   33444333443222  355555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        87 iD~lv~~Ag~   96 (261)
T 2wyu_A           87 LDYLVHAIAF   96 (261)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2

Probab=97.02  E-value=0.0037  Score=54.26  Aligned_cols=75  Identities=21%  Similarity=0.202  Sum_probs=55.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--FVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++....  ..|-.+.+.+.+.       .+++|++|
T Consensus         8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv   87 (270)
T 1yde_A            8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV   87 (270)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            5788999998 999999999999999999999999888776655554222  2345555544332       25799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        88 ~nAg~   92 (270)
T 1yde_A           88 NNAGH   92 (270)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            98874

>1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A

Probab=97.01  E-value=0.0035  Score=58.70  Aligned_cols=94  Identities=15%  Similarity=0.076  Sum_probs=64.8

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE--EEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--FVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      +.+|+|+|+|.+|.+++..+...|.+|++++++.++.+.+.+.++...  .+|..+.+.+.+...++|+|+++++.....
T Consensus         3 ~k~VlViGaG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~~~l~~~l~~~DvVIn~a~~~~~~   82 (450)
T 1ff9_A            3 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA   82 (450)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECCC--CHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCHHHHHHHHcCCcEEEECCccccch
Confidence            467999999999999998888889999999999887766544444211  234555555555556899999999864323


Q ss_pred             HHHHHhcccCCEEEEE
Q 019199          259 DAYMSLLKVAGVYVLV  274 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~  274 (344)
                      .....+++++..++..
T Consensus        83 ~i~~a~l~~g~~vvd~   98 (450)
T 1ff9_A           83 TVIKSAIRQKKHVVTT   98 (450)
T ss_dssp             HHHHHHHHHTCEEEES
T ss_pred             HHHHHHHhCCCeEEEe
Confidence            3344566666666654

>3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis}

Probab=97.01  E-value=0.0061  Score=52.60  Aligned_cols=76  Identities=22%  Similarity=0.287  Sum_probs=54.7

Q ss_pred             CCCCEEEEECC-C-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---C-Cc---EEEeCCCHHHHHHh-------c
Q 019199          179 QPGKSLGVIGL-G-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G-AD---KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g-~~---~~v~~~~~~~~~~~-------~  242 (344)
                      -.+.++||+|+ | ++|.+.+..+...|++|++++++.++.+.+.+++   + ..   ...|-.+.+.+.+.       .
T Consensus        20 l~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   99 (266)
T 3o38_A           20 LKGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKA   99 (266)
T ss_dssp             TTTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHh
Confidence            35788999998 7 7999999998889999999999988766654443   2 22   12345555444332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|++|++.|.
T Consensus       100 g~id~li~~Ag~  111 (266)
T 3o38_A          100 GRLDVLVNNAGL  111 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCcEEEECCCc
Confidence            579999999884

>1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A*

Probab=97.01  E-value=0.00096  Score=56.16  Aligned_cols=97  Identities=19%  Similarity=0.140  Sum_probs=66.5

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC---C-----C-cEEEeCCCHHHHHHhcCCcc
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL---G-----A-DKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~---g-----~-~~~v~~~~~~~~~~~~~~~d  246 (344)
                      ++++++||-+|+|. |..+..+++..|  .+|+.++.+++..+.+++.+   |     . ...+...+..........||
T Consensus        75 ~~~~~~vLDiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD  153 (226)
T 1i1n_A           75 LHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMGYAEEAPYD  153 (226)
T ss_dssp             SCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGCCGGGCCEE
T ss_pred             CCCCCEEEEEcCCc-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCcEEEEECCcccCcccCCCcC
Confidence            48899999999875 788888888776  58999999988776664322   1     1 11121122111001135699


Q ss_pred             EEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          247 FIIDTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       247 vvid~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +|+........+..+.+.|+|+|+++..-
T Consensus       154 ~i~~~~~~~~~~~~~~~~LkpgG~lv~~~  182 (226)
T 1i1n_A          154 AIHVGAAAPVVPQALIDQLKPGGRLILPV  182 (226)
T ss_dssp             EEEECSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             EEEECCchHHHHHHHHHhcCCCcEEEEEE
Confidence            99877665556789999999999998763

>3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti}

Probab=97.01  E-value=0.0035  Score=54.88  Aligned_cols=76  Identities=25%  Similarity=0.260  Sum_probs=55.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -.+.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|-.+.+.+.+.       .++
T Consensus        26 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  105 (283)
T 3v8b_A           26 QPSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGH  105 (283)
T ss_dssp             -CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            35688999998 99999999999889999999999988776664444   3222   2345555444332       268


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       106 iD~lVnnAg~  115 (283)
T 3v8b_A          106 LDIVVANAGI  115 (283)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998884

>3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp}

Probab=97.01  E-value=0.00048  Score=57.12  Aligned_cols=132  Identities=15%  Similarity=0.172  Sum_probs=75.5

Q ss_pred             ceeEEE-EecceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeC
Q 019199          135 YSSYIV-VHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLST  212 (344)
Q Consensus       135 ~~~~~~-~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~  212 (344)
                      |.+|.. .+....+.+++.+....+.. +.. ......+...  ++++.+||-+|+|. |..+..+++ .+. +|++++.
T Consensus        18 w~~~~~~~~~~~~~~~~~~~~f~~~~~-~~~-~~~~~~l~~~--~~~~~~vLDiG~G~-G~~~~~l~~-~~~~~v~~vD~   91 (205)
T 3grz_A           18 WEDYQPVFKDQEIIRLDPGLAFGTGNH-QTT-QLAMLGIERA--MVKPLTVADVGTGS-GILAIAAHK-LGAKSVLATDI   91 (205)
T ss_dssp             TCCCCCSSTTCEEEEESCC-----CCH-HHH-HHHHHHHHHH--CSSCCEEEEETCTT-SHHHHHHHH-TTCSEEEEEES
T ss_pred             ccccccCCCCceeEEecCCcccCCCCC-ccH-HHHHHHHHHh--ccCCCEEEEECCCC-CHHHHHHHH-CCCCEEEEEEC
Confidence            455555 55667778888776655431 111 1111122211  36889999999875 777777776 455 9999999


Q ss_pred             CchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEEECCCCch---hHHHHHHhcccCCEEEEEc
Q 019199          213 STSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFIIDTASGDH---PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       213 ~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~~~---~~~~~~~~l~~~G~iv~~g  275 (344)
                      +++..+.+++.   .+..  .++..+-.+   ...+.+|+|+.......   .+..+.+.|+++|+++..+
T Consensus        92 s~~~~~~a~~~~~~~~~~~v~~~~~d~~~---~~~~~fD~i~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~  159 (205)
T 3grz_A           92 SDESMTAAEENAALNGIYDIALQKTSLLA---DVDGKFDLIVANILAEILLDLIPQLDSHLNEDGQVIFSG  159 (205)
T ss_dssp             CHHHHHHHHHHHHHTTCCCCEEEESSTTT---TCCSCEEEEEEESCHHHHHHHGGGSGGGEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHcCCCceEEEeccccc---cCCCCceEEEECCcHHHHHHHHHHHHHhcCCCCEEEEEe
Confidence            98877666433   2322  222222111   12367999987654332   2445556789999998764

>4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens}

Probab=97.00  E-value=0.0043  Score=53.05  Aligned_cols=75  Identities=19%  Similarity=0.159  Sum_probs=53.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHhCCCcEE---EeCCCHHHHHHh--cCCccEEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS--KKEEALSLLGADKF---VVSSDLEQMKAL--GKSLDFIID  250 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~~~~---v~~~~~~~~~~~--~~~~dvvid  250 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++.+++.+  ..+.+ ++.|....   .|-.+++..++.  .+++|++++
T Consensus         7 L~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~-~~~g~~~~~~~~Dv~d~~~v~~~~~~g~iDiLVN   85 (247)
T 4hp8_A            7 LEGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDII-AKDGGNASALLIDFADPLAAKDSFTDAGFDILVN   85 (247)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHH-HHTTCCEEEEECCTTSTTTTTTSSTTTCCCEEEE
T ss_pred             CCCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHH-HHhCCcEEEEEccCCCHHHHHHHHHhCCCCEEEE
Confidence            35889999987 89999999999999999999998753  23444 56664332   233444333332  267999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        86 NAGi   89 (247)
T 4hp8_A           86 NAGI   89 (247)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9

Probab=97.00  E-value=0.0067  Score=47.66  Aligned_cols=95  Identities=20%  Similarity=0.053  Sum_probs=64.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHHhC--CCcEEE-eCCCHHHHHHh-cCCccEEEECCCCc
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST-SKKEEALSLL--GADKFV-VSSDLEQMKAL-GKSLDFIIDTASGD  255 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~~~~~--g~~~~v-~~~~~~~~~~~-~~~~dvvid~~g~~  255 (344)
                      ..+++|+|+|.+|...++.+...|.+|+++++++ ++.+.+.+.+  |...+. |..+++.+.+. ..++|+++-+++..
T Consensus         3 ~~~vlI~G~G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d   82 (153)
T 1id1_A            3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CCcEEEECCCHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCCeEEEcCCCCHHHHHHcChhhCCEEEEecCCh
Confidence            4568999999999999999999999999999974 5554443322  443332 34556666655 47899999999875


Q ss_pred             hh---HHHHHHhcccCCEEEEEc
Q 019199          256 HP---FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       256 ~~---~~~~~~~l~~~G~iv~~g  275 (344)
                      ..   .....+.+.+..+++..-
T Consensus        83 ~~n~~~~~~a~~~~~~~~ii~~~  105 (153)
T 1id1_A           83 ADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             HHHHHHHHHHHHHCCCCEEEEEE
Confidence            41   223334444556776653

>2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa}

Probab=97.00  E-value=0.0046  Score=53.78  Aligned_cols=73  Identities=18%  Similarity=0.151  Sum_probs=53.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++..  .   ...|-.+.+.+.+.       .+++|++
T Consensus        22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l  101 (272)
T 2nwq_A           22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL  101 (272)
T ss_dssp             CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred             cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence            67899998 9999999999988999999999998877666444431  1   12355565554443       1568999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus       102 vnnAG~  107 (272)
T 2nwq_A          102 INNAGL  107 (272)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999874

>3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron}

Probab=97.00  E-value=0.0011  Score=55.77  Aligned_cols=94  Identities=19%  Similarity=0.185  Sum_probs=65.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc----
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD----  255 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~----  255 (344)
                      .+|||+|+ |.+|..+++.+...|.+|+++++++++...+  .-+... ..|..+.+.+.+...++|+||.+.+..    
T Consensus         5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~Dl~d~~~~~~~~~~~d~vi~~a~~~~~~~   82 (227)
T 3dhn_A            5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIE--NEHLKVKKADVSSLDEVCEVCKGADAVISAFNPGWNNP   82 (227)
T ss_dssp             CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCC--CTTEEEECCCTTCHHHHHHHHTTCSEEEECCCC-----
T ss_pred             CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhc--cCceEEEEecCCCHHHHHHHhcCCCEEEEeCcCCCCCh
Confidence            57999998 9999999999999999999999998765322  112111 124456666666667899999998753    


Q ss_pred             -------hhHHHHHHhcccC--CEEEEEcCC
Q 019199          256 -------HPFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       256 -------~~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                             .....+++.++..  ++++.++..
T Consensus        83 ~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~  113 (227)
T 3dhn_A           83 DIYDETIKVYLTIIDGVKKAGVNRFLMVGGA  113 (227)
T ss_dssp             -CCSHHHHHHHHHHHHHHHTTCSEEEEECCS
T ss_pred             hHHHHHHHHHHHHHHHHHHhCCCEEEEeCCh
Confidence                   1234455555544  489888754

>2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans}

Probab=96.99  E-value=0.0022  Score=54.28  Aligned_cols=97  Identities=18%  Similarity=0.272  Sum_probs=67.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhC---CC---cEEEeCCCHHHHHHh--cCCccEEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLL---GA---DKFVVSSDLEQMKAL--GKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~---g~---~~~v~~~~~~~~~~~--~~~~dvvi  249 (344)
                      .++.+||.+|+| .|..+..+++.. +.+|+.++.+++..+.+++.+   |.   -.++..+..+.+...  .+.+|+|+
T Consensus        53 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~fD~I~  131 (233)
T 2gpy_A           53 AAPARILEIGTA-IGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFGDALQLGEKLELYPLFDVLF  131 (233)
T ss_dssp             HCCSEEEEECCT-TSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCGGGSHHHHTTSCCEEEEE
T ss_pred             cCCCEEEEecCC-CcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEECCHHHHHHhcccCCCccEEE
Confidence            578899999987 588888999887 579999999998877764432   43   122222222323333  46799998


Q ss_pred             ECCCC---chhHHHHHHhcccCCEEEEEcC
Q 019199          250 DTASG---DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       250 d~~g~---~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      .....   ...+..+.+.|+++|+++....
T Consensus       132 ~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  161 (233)
T 2gpy_A          132 IDAAKGQYRRFFDMYSPMVRPGGLILSDNV  161 (233)
T ss_dssp             EEGGGSCHHHHHHHHGGGEEEEEEEEEETT
T ss_pred             ECCCHHHHHHHHHHHHHHcCCCeEEEEEcC
Confidence            65543   2346788889999999988643

>3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A*

Probab=96.99  E-value=0.0044  Score=53.67  Aligned_cols=86  Identities=21%  Similarity=0.218  Sum_probs=63.6

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-----
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-----  255 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-----  255 (344)
                      +.+++|+|+|+.|.+++..+...|.+|+++.|+.++.+.+. ++|.. .+...+.       .++|++|++++..     
T Consensus       118 ~k~vlvlGaGGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~~-~~~~~~l-------~~~DiVInaTp~Gm~~~~  188 (269)
T 3phh_A          118 YQNALILGAGGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGCD-CFMEPPK-------SAFDLIINATSASLHNEL  188 (269)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTCE-EESSCCS-------SCCSEEEECCTTCCCCSC
T ss_pred             CCEEEEECCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCe-EecHHHh-------ccCCEEEEcccCCCCCCC
Confidence            88999999999999999999999999999999999988875 77743 3333321       1699999988642     


Q ss_pred             h-hHHHHHHhcccCCEEEEEc
Q 019199          256 H-PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       256 ~-~~~~~~~~l~~~G~iv~~g  275 (344)
                      . ....+...++++..++++-
T Consensus       189 ~l~~~~l~~~l~~~~~v~D~v  209 (269)
T 3phh_A          189 PLNKEVLKGYFKEGKLAYDLA  209 (269)
T ss_dssp             SSCHHHHHHHHHHCSEEEESC
T ss_pred             CCChHHHHhhCCCCCEEEEeC
Confidence            1 1222233677787777664

>3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum}

Probab=96.98  E-value=0.0026  Score=54.60  Aligned_cols=93  Identities=25%  Similarity=0.309  Sum_probs=63.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      +-+.++||+|+ |++|.+.++.+...|++|+++++++++...      ....++..+.+.+.+.       .+++|++++
T Consensus        20 ~m~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~   93 (251)
T 3orf_A           20 HMSKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVC   93 (251)
T ss_dssp             --CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEE
T ss_pred             ccCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            45788999998 999999999999999999999998775421      1223344554443332       257999999


Q ss_pred             CCCCc-------h-------------------hHHHHHHhcccCCEEEEEcCC
Q 019199          251 TASGD-------H-------------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 ~~g~~-------~-------------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.|..       .                   ..+.++..++++|+++.++..
T Consensus        94 ~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  146 (251)
T 3orf_A           94 AAGGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGAS  146 (251)
T ss_dssp             CCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEech
Confidence            98831       0                   123344556678899999765

>1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A*

Probab=96.98  E-value=0.008  Score=54.13  Aligned_cols=94  Identities=20%  Similarity=0.237  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-------------EeCCC-----HHHHHH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-------------VVSSD-----LEQMKA  240 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-------------v~~~~-----~~~~~~  240 (344)
                      -.|++|.|.|.|.+|+.+++.++.+|++|++.+.+.++.+.+ +++|++.+             +....     .+.+..
T Consensus       173 L~GktV~I~G~GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a-~~~ga~~v~~~ell~~~~DIliP~A~~~~I~~~~~~~  251 (355)
T 1c1d_A          173 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTAVALEDVLSTPCDVFAPCAMGGVITTEVART  251 (355)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEECCGGGGGGCCCSEEEECSCSCCBCHHHHHH
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEEeCCccHHHHH-HhcCCEEeChHHhhcCccceecHhHHHhhcCHHHHhh
Confidence            578999999999999999999999999999888776653333 56665432             11000     112222


Q ss_pred             hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +  +.++++++...+.+...+.+.|+.+|.++.-+
T Consensus       252 l--k~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd  284 (355)
T 1c1d_A          252 L--DCSVVAGAANNVIADEAASDILHARGILYAPD  284 (355)
T ss_dssp             C--CCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred             C--CCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence            2  47889998888765457788888888776544

>2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ...

Probab=96.98  E-value=0.0057  Score=53.52  Aligned_cols=75  Identities=11%  Similarity=0.044  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHHH----hCCCcE---EEeCCC----HHHHHHh-----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEALS----LLGADK---FVVSSD----LEQMKAL-----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~~~----~~g~~~---~v~~~~----~~~~~~~-----  241 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++. ++.+.+.+    ..|...   ..|-.+    .+.+.+.     
T Consensus        22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~  101 (288)
T 2x9g_A           22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF  101 (288)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence            4678999998 9999999998888999999999988 66544433    234322   234455    4443332     


Q ss_pred             --cCCccEEEECCCC
Q 019199          242 --GKSLDFIIDTASG  254 (344)
Q Consensus       242 --~~~~dvvid~~g~  254 (344)
                        .+++|++|++.|.
T Consensus       102 ~~~g~iD~lvnnAG~  116 (288)
T 2x9g_A          102 RAFGRCDVLVNNASA  116 (288)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              2579999998873

>1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13

Probab=96.98  E-value=0.0034  Score=54.62  Aligned_cols=100  Identities=22%  Similarity=0.206  Sum_probs=69.1

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC----C--C-cEEEeCCCHHHHHHhcCCc
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL----G--A-DKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~----g--~-~~~v~~~~~~~~~~~~~~~  245 (344)
                      ...++++++||.+|+| .|..+..+++..  +.+|+.++.+++..+.+.+.+    |  . ...+...+........+.+
T Consensus        94 ~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~v~~~~~d~~~~~~~~~~~  172 (280)
T 1i9g_A           94 EGDIFPGARVLEAGAG-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPDGSV  172 (280)
T ss_dssp             HTTCCTTCEEEEECCT-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCTTCE
T ss_pred             HcCCCCCCEEEEEccc-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCcEEEEECchHhcCCCCCce
Confidence            3345899999999987 688888888875  459999999998877764432    3  2 2222222221110012569


Q ss_pred             cEEEECCCCc-hhHHHHHHhcccCCEEEEEc
Q 019199          246 DFIIDTASGD-HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       246 dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |+|+.....+ ..+..+.+.|+++|+++...
T Consensus       173 D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~  203 (280)
T 1i9g_A          173 DRAVLDMLAPWEVLDAVSRLLVAGGVLMVYV  203 (280)
T ss_dssp             EEEEEESSCGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             eEEEECCcCHHHHHHHHHHhCCCCCEEEEEe
Confidence            9998766554 56899999999999998874

>2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A

Probab=96.98  E-value=0.0048  Score=52.94  Aligned_cols=74  Identities=23%  Similarity=0.254  Sum_probs=51.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhCCCcEE---EeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGADKF---VVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++  .+.+ +..|....   .|..+.+.+.+.       .+++|
T Consensus         3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id   81 (255)
T 2q2v_A            3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPAPALAEI-ARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD   81 (255)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHH-HhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence            4678999998 999999999998899999999987652  1222 23343322   244555444332       25899


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        82 ~lv~~Ag~   89 (255)
T 2q2v_A           82 ILVNNAGI   89 (255)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii}

Probab=96.98  E-value=0.0026  Score=56.44  Aligned_cols=108  Identities=24%  Similarity=0.343  Sum_probs=76.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.+++.++ +.+ .+.|+.. .   +.+   ++..+.|+|+.++....  
T Consensus       140 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~~-~---~l~---ell~~aDvV~l~~p~~~~t  210 (307)
T 1wwk_A          140 LEGKTIGIIGFGRIGYQVAKIANALGMNILLYDPYPNE-ERA-KEVNGKF-V---DLE---TLLKESDVVTIHVPLVEST  210 (307)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH-HHTTCEE-C---CHH---HHHHHCSEEEECCCCSTTT
T ss_pred             cCCceEEEEccCHHHHHHHHHHHHCCCEEEEECCCCCh-hhH-hhcCccc-c---CHH---HHHhhCCEEEEecCCChHH
Confidence            46789999999999999999999999999999988876 444 5677642 1   222   22235899999877422  


Q ss_pred             --hH-HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          257 --PF-DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       257 --~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                        .+ ...++.+++++.++.++...-.             +-+.+.+.+.+|.+.
T Consensus       211 ~~li~~~~l~~mk~ga~lin~arg~~v-------------d~~aL~~aL~~g~i~  252 (307)
T 1wwk_A          211 YHLINEERLKLMKKTAILINTSRGPVV-------------DTNALVKALKEGWIA  252 (307)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECSCGGGB-------------CHHHHHHHHHHTSSS
T ss_pred             hhhcCHHHHhcCCCCeEEEECCCCccc-------------CHHHHHHHHHhCCCc
Confidence              12 4677889999999988643111             134556666666653

>3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus}

Probab=96.97  E-value=0.0021  Score=54.09  Aligned_cols=84  Identities=23%  Similarity=0.095  Sum_probs=58.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh---cCCccEEEECCCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL---GKSLDFIIDTASGD  255 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~---~~~~dvvid~~g~~  255 (344)
                      .+.++||+|+ +++|.+.++.+...|++|++++++.+              .|-.+++.+.+.   .+++|+++++.|..
T Consensus         5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~g~id~lv~nAg~~   70 (223)
T 3uce_A            5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETIGAFDHLIVTAGSY   70 (223)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHHCSEEEEEECCCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHhCCCCEEEECCCCC
Confidence            4678899998 99999999988888999999987654              344444433332   15789999888742


Q ss_pred             --------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          256 --------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       256 --------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                                                ...+.++..++++|+++.++..
T Consensus        71 ~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~  118 (223)
T 3uce_A           71 APAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGM  118 (223)
T ss_dssp             CCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCG
T ss_pred             CCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecch
Confidence                                      0123344456668999998754

>1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A*

Probab=96.97  E-value=0.0013  Score=55.82  Aligned_cols=98  Identities=20%  Similarity=0.184  Sum_probs=67.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC-cEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA-DKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .++++++||.+|+| .|..+..+++..+.+|++++.+++..+.+++.   .|. ...+...+...--....++|+|+...
T Consensus        88 ~~~~~~~vLdiG~G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~Ii~~~  166 (235)
T 1jg1_A           88 NLKPGMNILEVGTG-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVIIVTA  166 (235)
T ss_dssp             TCCTTCCEEEECCT-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEEECS
T ss_pred             CCCCCCEEEEEeCC-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEECCcccCCCCCCCccEEEECC
Confidence            44889999999998 68888899988778999999998877666433   342 22122222100000123599999877


Q ss_pred             CCchhHHHHHHhcccCCEEEEEc
Q 019199          253 SGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       253 g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ........+.+.|+++|+++..-
T Consensus       167 ~~~~~~~~~~~~L~pgG~lvi~~  189 (235)
T 1jg1_A          167 GAPKIPEPLIEQLKIGGKLIIPV  189 (235)
T ss_dssp             BBSSCCHHHHHTEEEEEEEEEEE
T ss_pred             cHHHHHHHHHHhcCCCcEEEEEE
Confidence            65555678899999999997653

>2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A*

Probab=96.97  E-value=0.0034  Score=54.68  Aligned_cols=75  Identities=20%  Similarity=0.228  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++   |...   ..|..+.+.+.+.       .+++
T Consensus        21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i  100 (277)
T 2rhc_B           21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPV  100 (277)
T ss_dssp             TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999998 99999999999889999999999987765443332   4322   2345555443332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus       101 D~lv~~Ag~  109 (277)
T 2rhc_B          101 DVLVNNAGR  109 (277)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens}

Probab=96.96  E-value=0.01  Score=53.59  Aligned_cols=75  Identities=21%  Similarity=0.314  Sum_probs=53.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-----------HHHHHHhCCCcE---EEeCCCHHHHHHh--
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-----------KEEALSLLGADK---FVVSSDLEQMKAL--  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-----------~~~~~~~~g~~~---~v~~~~~~~~~~~--  241 (344)
                      -.|.++||+|+ +++|.+.+..+...|++|++++++.++           .+.+ +..|...   ..|-.+.+.+.+.  
T Consensus        43 l~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~-~~~g~~~~~~~~Dv~d~~~v~~~~~  121 (346)
T 3kvo_A           43 LAGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEI-EAVGGKALPCIVDVRDEQQISAAVE  121 (346)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHH-HHTTCEEEEEECCTTCHHHHHHHHH
T ss_pred             CCCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHH-HhcCCeEEEEEccCCCHHHHHHHHH
Confidence            35789999998 999999999998899999999988763           1222 3445332   2355665544332  


Q ss_pred             -----cCCccEEEECCCC
Q 019199          242 -----GKSLDFIIDTASG  254 (344)
Q Consensus       242 -----~~~~dvvid~~g~  254 (344)
                           .+++|++|++.|.
T Consensus       122 ~~~~~~g~iDilVnnAG~  139 (346)
T 3kvo_A          122 KAIKKFGGIDILVNNASA  139 (346)
T ss_dssp             HHHHHHSCCCEEEECCCC
T ss_pred             HHHHHcCCCCEEEECCCC
Confidence                 2589999999884

>3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris}

Probab=96.96  E-value=0.004  Score=53.45  Aligned_cols=75  Identities=17%  Similarity=0.148  Sum_probs=54.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHhc------CCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKALG------KSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~~------~~~d  246 (344)
                      .+.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.+++   |...   ..|-.+.+.+.+..      +++|
T Consensus         6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~g~id   85 (252)
T 3h7a_A            6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAHAPLE   85 (252)
T ss_dssp             CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHSCEE
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhhCCce
Confidence            5688999998 99999999999999999999999988766554433   4322   23455554433221      6799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        86 ~lv~nAg~   93 (252)
T 3h7a_A           86 VTIFNVGA   93 (252)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCc
Confidence            99999884

>3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A*

Probab=96.95  E-value=0.0032  Score=54.07  Aligned_cols=103  Identities=14%  Similarity=0.160  Sum_probs=69.2

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--cEEEeCCCHHHHHHhcCCccEEEEC
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      ....++++.+||-+|+| .|..+..+++..+++|++++.+++..+.+.+....  ...+...+........+.+|+|+..
T Consensus        49 ~~~~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~  127 (266)
T 3ujc_A           49 SDIELNENSKVLDIGSG-LGGGCMYINEKYGAHTHGIDICSNIVNMANERVSGNNKIIFEANDILTKEFPENNFDLIYSR  127 (266)
T ss_dssp             TTCCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHTCCSCTTEEEEECCTTTCCCCTTCEEEEEEE
T ss_pred             HhcCCCCCCEEEEECCC-CCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhhcCCCeEEEECccccCCCCCCcEEEEeHH
Confidence            33345889999999987 57888888887788999999999988888544422  1111111111111113579999875


Q ss_pred             CCCc--------hhHHHHHHhcccCCEEEEEcCC
Q 019199          252 ASGD--------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       252 ~g~~--------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..-.        ..+..+.+.|+|+|+++.....
T Consensus       128 ~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  161 (266)
T 3ujc_A          128 DAILALSLENKNKLFQKCYKWLKPTGTLLITDYC  161 (266)
T ss_dssp             SCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEec
Confidence            4322        2367888899999999987543

>2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus}

Probab=96.95  E-value=0.0034  Score=53.75  Aligned_cols=118  Identities=15%  Similarity=0.066  Sum_probs=79.1

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC----CCc-EEEeCCCHHHHHHh-cCCcc
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL----GAD-KFVVSSDLEQMKAL-GKSLD  246 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~----g~~-~~v~~~~~~~~~~~-~~~~d  246 (344)
                      ...++++++||.+|+|. |..+..+++..  +.+|+.++.+++..+.+++.+    |.+ ..+...+.... .. .+.+|
T Consensus        91 ~~~~~~~~~vLdiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v~~~~~d~~~~-~~~~~~~D  168 (258)
T 2pwy_A           91 LLDLAPGMRVLEAGTGS-GGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENVRFHLGKLEEA-ELEEAAYD  168 (258)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCEEEEESCGGGC-CCCTTCEE
T ss_pred             HcCCCCCCEEEEECCCc-CHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCEEEEECchhhc-CCCCCCcC
Confidence            33458999999999975 88888999885  469999999998877774443    522 11211221111 01 24699


Q ss_pred             EEEECCCCc-hhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          247 FIIDTASGD-HPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       247 vvid~~g~~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                      +|+.....+ ..+..+.+.|+++|+++.+...              .+.+.++++.+.+..+.
T Consensus       169 ~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~--------------~~~~~~~~~~l~~~gf~  217 (258)
T 2pwy_A          169 GVALDLMEPWKVLEKAALALKPDRFLVAYLPN--------------ITQVLELVRAAEAHPFR  217 (258)
T ss_dssp             EEEEESSCGGGGHHHHHHHEEEEEEEEEEESC--------------HHHHHHHHHHHTTTTEE
T ss_pred             EEEECCcCHHHHHHHHHHhCCCCCEEEEEeCC--------------HHHHHHHHHHHHHCCCc
Confidence            998766654 5689999999999999887432              12345666666655443

>3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A*

Probab=96.95  E-value=0.011  Score=51.44  Aligned_cols=76  Identities=16%  Similarity=0.144  Sum_probs=53.8

Q ss_pred             CCCCEEEEECC-Ch--HHHHHHHHHHHCCCeEEEEeCCc--hhHHHHHHhCCCcEE--EeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GG--LGHMAVKFGKAFGLNVTVLSTST--SKKEEALSLLGADKF--VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~--~G~~ai~~a~~~g~~V~~~~~~~--~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~  244 (344)
                      -.+.++||+|+ |.  +|.+.++.+...|++|++++++.  +..+.+.++.+....  .|-.+.+.+.+.       .++
T Consensus        24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~  103 (280)
T 3nrc_A           24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVWDG  103 (280)
T ss_dssp             TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHCSS
T ss_pred             cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHcCC
Confidence            35688999985 44  99999998888999999999887  556666445553222  344555444332       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       104 id~li~nAg~  113 (280)
T 3nrc_A          104 LDAIVHSIAF  113 (280)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999999874

>2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A

Probab=96.94  E-value=0.0013  Score=55.79  Aligned_cols=96  Identities=18%  Similarity=0.140  Sum_probs=63.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      +.++||+|+ |.+|.+.++.+...|+  +|+++++++++.... ..-+... ..|..+.+.+.+...++|++|++.|...
T Consensus        18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~ag~~~   96 (242)
T 2bka_A           18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTTR   96 (242)
T ss_dssp             CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCCH
T ss_pred             CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCcccc-ccCCceEEecCcCCHHHHHHHhcCCCEEEECCCccc
Confidence            578999997 9999999999988899  999999887654322 1112221 2233444445455568999999998532


Q ss_pred             --------------hHHHHHHhccc--CCEEEEEcCC
Q 019199          257 --------------PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       257 --------------~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                                    ....+++.+++  .++++.++..
T Consensus        97 ~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~  133 (242)
T 2bka_A           97 GKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSK  133 (242)
T ss_dssp             HHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCT
T ss_pred             ccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccC
Confidence                          12234444433  3689888754

>3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima}

Probab=96.94  E-value=0.0052  Score=51.46  Aligned_cols=91  Identities=13%  Similarity=0.014  Sum_probs=66.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHh-cCCccEEEECCCCchhHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKAL-GKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~dvvid~~g~~~~~~~  260 (344)
                      +|+|+|+|.+|..+++.+...|.+|+++++++++.+.+.+..|...+. |..+.+.+.+. ..++|+++-+++... .+.
T Consensus         2 ~iiIiG~G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~-~n~   80 (218)
T 3l4b_C            2 KVIIIGGETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKATIIHGDGSHKEILRDAEVSKNDVVVILTPRDE-VNL   80 (218)
T ss_dssp             CEEEECCHHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSEEEESCTTSHHHHHHHTCCTTCEEEECCSCHH-HHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCeEEEcCCCCHHHHHhcCcccCCEEEEecCCcH-HHH
Confidence            478999999999999999999999999999999888775566754333 44556666665 378999999998765 332


Q ss_pred             H----HHhcccCCEEEEE
Q 019199          261 Y----MSLLKVAGVYVLV  274 (344)
Q Consensus       261 ~----~~~l~~~G~iv~~  274 (344)
                      .    .+.+.+..+++..
T Consensus        81 ~~~~~a~~~~~~~~iia~   98 (218)
T 3l4b_C           81 FIAQLVMKDFGVKRVVSL   98 (218)
T ss_dssp             HHHHHHHHTSCCCEEEEC
T ss_pred             HHHHHHHHHcCCCeEEEE
Confidence            2    2223344566554

>3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum}

Probab=96.94  E-value=0.0032  Score=54.86  Aligned_cols=76  Identities=16%  Similarity=0.166  Sum_probs=55.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .+..   ...|-.+.+.+++.       .++
T Consensus        30 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  109 (276)
T 3r1i_A           30 LSGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGG  109 (276)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            45789999997 9999999999988999999999998876554333   3322   22355565544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       110 iD~lvnnAg~  119 (276)
T 3r1i_A          110 IDIAVCNAGI  119 (276)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998884

>3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus}

Probab=96.93  E-value=0.0031  Score=55.53  Aligned_cols=75  Identities=23%  Similarity=0.170  Sum_probs=55.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---C-Cc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G-AD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g-~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+++   + ..   ...|-.+.+.+.+.       .++
T Consensus        40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  119 (293)
T 3rih_A           40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA  119 (293)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence            5788999987 99999999999999999999999988766654444   2 11   12355555443332       267


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       120 iD~lvnnAg~  129 (293)
T 3rih_A          120 LDVVCANAGI  129 (293)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber}

Probab=96.93  E-value=0.0036  Score=54.65  Aligned_cols=76  Identities=17%  Similarity=0.203  Sum_probs=53.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      ..+.++||+|+ +++|.+.+..+...|++|++++++.++.+.+.+++   |...   ..|-.+.+.+.+.       .++
T Consensus        22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  101 (279)
T 3sju_A           22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP  101 (279)
T ss_dssp             ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35688999998 99999999988889999999999988766554433   4332   2355555444332       268


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       102 id~lv~nAg~  111 (279)
T 3sju_A          102 IGILVNSAGR  111 (279)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCCC
Confidence            9999999884

>1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B*

Probab=96.93  E-value=0.0016  Score=56.04  Aligned_cols=89  Identities=26%  Similarity=0.276  Sum_probs=57.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHhCC----CcEE--EeC-C
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST-------------------SKKEEALSLLG----ADKF--VVS-S  233 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~-------------------~~~~~~~~~~g----~~~~--v~~-~  233 (344)
                      +.+|+|+|+|++|..+++.+...|. ++++++...                   .|.+.+.+.+.    ...+  ++. -
T Consensus        31 ~~~VlVvG~Gg~G~~va~~La~~Gv~~i~lvD~d~v~~sNl~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  110 (249)
T 1jw9_B           31 DSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFDTVSLSNLQRQTLHSDATVGQPKVESARDALTRINPHIAITPVNALL  110 (249)
T ss_dssp             HCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCCBCCGGGGGTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             CCeEEEEeeCHHHHHHHHHHHHcCCCeEEEEcCCCcccccCCcccccChhhcCcHHHHHHHHHHHHHCCCcEEEEEeccC
Confidence            4789999999999999999999998 899998876                   55544433332    2222  111 1


Q ss_pred             CHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCC
Q 019199          234 DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAG  269 (344)
Q Consensus       234 ~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G  269 (344)
                      +.+.+.+.-.++|+|++++.+..+-..+.+.....|
T Consensus       111 ~~~~~~~~~~~~DvVi~~~d~~~~~~~l~~~~~~~~  146 (249)
T 1jw9_B          111 DDAELAALIAEHDLVLDCTDNVAVRNQLNAGCFAAK  146 (249)
T ss_dssp             CHHHHHHHHHTSSEEEECCSSHHHHHHHHHHHHHHT
T ss_pred             CHhHHHHHHhCCCEEEEeCCCHHHHHHHHHHHHHcC
Confidence            223333444679999999988764333333333333

>3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron}

Probab=96.92  E-value=0.0033  Score=53.87  Aligned_cols=76  Identities=13%  Similarity=0.113  Sum_probs=55.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----C-C-c--EEEeCCCHHHHHHh-------
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----G-A-D--KFVVSSDLEQMKAL-------  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g-~-~--~~v~~~~~~~~~~~-------  241 (344)
                      ..+.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.+++     + . .  ...|-.+.+.+.+.       
T Consensus         5 ~~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~   84 (250)
T 3nyw_A            5 KQKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQK   84 (250)
T ss_dssp             CCCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHh
Confidence            35688999998 99999999988888999999999988776654332     2 1 1  12355565444332       


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                      .+++|+++++.|.
T Consensus        85 ~g~iD~lvnnAg~   97 (250)
T 3nyw_A           85 YGAVDILVNAAAM   97 (250)
T ss_dssp             HCCEEEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2679999999984

>1edz_A 5,10-methylenetetrahydrofolate dehydrogenase; nucleotide-binding domain, monofunctional, oxidoreductase; 2.80A {Saccharomyces cerevisiae} SCOP: c.2.1.7 c.58.1.2 PDB: 1ee9_A*

Probab=96.92  E-value=0.0004  Score=61.59  Aligned_cols=118  Identities=15%  Similarity=0.106  Sum_probs=78.0

Q ss_pred             cccchhhhHhHHHHHh---------ccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-
Q 019199          159 APLLCAGITVYTPMMR---------HKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-  227 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~---------~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-  227 (344)
                      ..+||+...+...+..         .+.--.|.+++|+|+| .+|..+++++...|++|+++.++..+.....+.++.. 
T Consensus       146 ~~~PcTp~a~v~ll~~~~~~~~~~~~g~~l~gk~vvVIG~G~iVG~~~A~~L~~~gAtVtv~nR~~~~l~~ra~~la~~~  225 (320)
T 1edz_A          146 SILPCTPLAIVKILEFLKIYNNLLPEGNRLYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNK  225 (320)
T ss_dssp             CCCCHHHHHHHHHHHHTTCSCTTSCTTCTTTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCC
T ss_pred             CcCCCcHHHHHHHHHhhcccccccccCCCCCCCEEEEECCCcchHHHHHHHHHHCCCEEEEEeCchHHHHhHHHHHhhhc
Confidence            4577777777766666         2322578999999997 5799999999999999999988744332111233321 


Q ss_pred             EEEe-C--CCHHHHHHhcCCccEEEECCCCchh-HHHHHHhcccCCEEEEEcCCC
Q 019199          228 KFVV-S--SDLEQMKALGKSLDFIIDTASGDHP-FDAYMSLLKVAGVYVLVGFPS  278 (344)
Q Consensus       228 ~~v~-~--~~~~~~~~~~~~~dvvid~~g~~~~-~~~~~~~l~~~G~iv~~g~~~  278 (344)
                      +... .  .+.+.+.+..+.+|+||.++|.+.. +.  -+.++++..++++|...
T Consensus       226 ~~~t~~~~t~~~~L~e~l~~ADIVIsAtg~p~~vI~--~e~vk~GavVIDVgi~r  278 (320)
T 1edz_A          226 HHVEDLGEYSEDLLKKCSLDSDVVITGVPSENYKFP--TEYIKEGAVCINFACTK  278 (320)
T ss_dssp             CEEEEEEECCHHHHHHHHHHCSEEEECCCCTTCCBC--TTTSCTTEEEEECSSSC
T ss_pred             ccccccccccHhHHHHHhccCCEEEECCCCCcceeC--HHHcCCCeEEEEcCCCc
Confidence            1010 0  1124455555679999999998752 22  23478888888998764

>3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp}

Probab=96.91  E-value=0.0032  Score=53.89  Aligned_cols=75  Identities=25%  Similarity=0.271  Sum_probs=55.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++   +...   ..|-.+.+.+.+.       .+++
T Consensus         8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   87 (253)
T 3qiv_A            8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEFGGI   87 (253)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999998 99999999999999999999999988776654433   3321   2344555444332       2589


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        88 d~li~~Ag~   96 (253)
T 3qiv_A           88 DYLVNNAAI   96 (253)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCc
Confidence            999999875

>3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A

Probab=96.91  E-value=0.0018  Score=56.76  Aligned_cols=82  Identities=16%  Similarity=0.163  Sum_probs=56.4

Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC-----CcE-EEeCCCHHHHHHhc
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG-----ADK-FVVSSDLEQMKALG  242 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g-----~~~-~v~~~~~~~~~~~~  242 (344)
                      .++.....--.+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++     ... .++..+.   .+..
T Consensus       116 ~~l~~~~~~l~~k~vlVlGaGG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~~l---~~~l  192 (283)
T 3jyo_A          116 RGMEEGLPNAKLDSVVQVGAGGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDARGI---EDVI  192 (283)
T ss_dssp             HHHHHHCTTCCCSEEEEECCSHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECSTTH---HHHH
T ss_pred             HHHHHhCcCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHHHH---HHHH
Confidence            344443332568899999999999999999988999 79999999988776645543     111 2222232   2222


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      .++|+++++++.
T Consensus       193 ~~~DiVInaTp~  204 (283)
T 3jyo_A          193 AAADGVVNATPM  204 (283)
T ss_dssp             HHSSEEEECSST
T ss_pred             hcCCEEEECCCC
Confidence            459999999863

>2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A*

Probab=96.91  E-value=0.0028  Score=56.31  Aligned_cols=102  Identities=20%  Similarity=0.260  Sum_probs=69.6

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHhcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~d  246 (344)
                      +.....+.++++||.+|+|. |..+..+++..|++|++++.+++..+.+.+..   |..  ..+...+..   ...+.+|
T Consensus        82 ~~~~~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~---~~~~~fD  157 (318)
T 2fk8_A           82 NLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE---DFAEPVD  157 (318)
T ss_dssp             HHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG---GCCCCCS
T ss_pred             HHHhcCCCCcCEEEEEcccc-hHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEECChH---HCCCCcC
Confidence            33444458899999999976 88888888887999999999998877774432   321  112122221   1236799


Q ss_pred             EEEEC-----CCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDT-----ASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~-----~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+..     .+.   ...+..+.+.|+|+|+++.....
T Consensus       158 ~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  196 (318)
T 2fk8_A          158 RIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSSV  196 (318)
T ss_dssp             EEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             EEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence            99875     321   23477788899999999876543

>2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1

Probab=96.90  E-value=0.011  Score=49.56  Aligned_cols=98  Identities=17%  Similarity=0.203  Sum_probs=68.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC---CC--c-EEEeCCCHHHHHHhc-----CCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL---GA--D-KFVVSSDLEQMKALG-----KSL  245 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~---g~--~-~~v~~~~~~~~~~~~-----~~~  245 (344)
                      .++.+||-+|+| .|..++.+++.+  +.+|+.++.+++..+.+++.+   |.  . .++..+..+.+....     +.+
T Consensus        68 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~~~~~~~~~~~~~~  146 (229)
T 2avd_A           68 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF  146 (229)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred             cCCCEEEEEcCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEcCHHHHHHHHHhcCCCCCc
Confidence            677899999987 688889999876  469999999998877664332   42  1 233333333333332     579


Q ss_pred             cEEEECCCCc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASGD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+|+-.....   ..+..+.+.|+++|.++.....
T Consensus       147 D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~  181 (229)
T 2avd_A          147 DVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL  181 (229)
T ss_dssp             EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred             cEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECCC
Confidence            9988654332   3478888999999999887544

>1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7

Probab=96.90  E-value=0.0012  Score=55.78  Aligned_cols=96  Identities=14%  Similarity=0.139  Sum_probs=66.8

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-------CeEEEEeCCchhHHHHHHhC----------CCcEEEeCCCHHHHH
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG-------LNVTVLSTSTSKKEEALSLL----------GADKFVVSSDLEQMK  239 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g-------~~V~~~~~~~~~~~~~~~~~----------g~~~~v~~~~~~~~~  239 (344)
                      .++++++||.+|+|. |..+..+++..+       .+|+.++.+++..+.+++.+          ..-.++..+..+...
T Consensus        81 ~~~~~~~VLdiG~G~-G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~~~~~  159 (227)
T 1r18_A           81 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGYP  159 (227)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCCG
T ss_pred             hCCCCCEEEEECCCc-cHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEECCcccCCC
Confidence            358899999999875 888888888766       49999999988776664322          111222222111010


Q ss_pred             HhcCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       240 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                       ..+.||+|+...........+.+.|+++|+++..
T Consensus       160 -~~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~  193 (227)
T 1r18_A          160 -PNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  193 (227)
T ss_dssp             -GGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             -cCCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence             1256999998777666678999999999999865

>2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus}

Probab=96.89  E-value=0.017  Score=50.32  Aligned_cols=75  Identities=20%  Similarity=0.115  Sum_probs=52.0

Q ss_pred             CCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCC-c-EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGA-D-KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~-~-~~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+   |++|.+.+..+...|++|++++++++   ..+.+.+..+. . ...|-.+.+.+.+.       .++
T Consensus        20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   99 (285)
T 2p91_A           20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENWGS   99 (285)
T ss_dssp             TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999985   69999999988889999999998875   33344333442 1 22355555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus       100 iD~lv~~Ag~  109 (285)
T 2p91_A          100 LDIIVHSIAY  109 (285)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix}

Probab=96.89  E-value=0.0048  Score=53.12  Aligned_cols=75  Identities=23%  Similarity=0.200  Sum_probs=53.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCc-E--EEeCCCHHHHHHhc------CC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GAD-K--FVVSSDLEQMKALG------KS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~-~--~v~~~~~~~~~~~~------~~  244 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++     +.. .  ..|..+.+.+.+..      .+
T Consensus         6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g   85 (260)
T 2z1n_A            6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG   85 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4678999998 99999999999889999999999987765553333     312 1  23555555443321      13


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        86 id~lv~~Ag~   95 (260)
T 2z1n_A           86 ADILVYSTGG   95 (260)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti}

Probab=96.88  E-value=0.0039  Score=54.47  Aligned_cols=75  Identities=24%  Similarity=0.201  Sum_probs=55.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEE---EeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKF---VVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~~  245 (344)
                      .|.++||+|+ +++|.+.++.+...|++|+++++++++.+.+.+++   +....   .|-.+.+.+.+.       .+++
T Consensus         7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   86 (280)
T 3tox_A            7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL   86 (280)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence            5788999987 99999999999889999999999988876665544   33222   244455443332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        87 D~lvnnAg~   95 (280)
T 3tox_A           87 DTAFNNAGA   95 (280)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999883

>4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A*

Probab=96.88  E-value=0.0057  Score=53.23  Aligned_cols=75  Identities=19%  Similarity=0.131  Sum_probs=54.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.+++    |...   ..|-.+.+.+.+.       .+
T Consensus        25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g  104 (277)
T 4fc7_A           25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG  104 (277)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence            35788999998 99999999999889999999999987765543332    4322   2355555444332       25


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|+++++.|
T Consensus       105 ~id~lv~nAg  114 (277)
T 4fc7_A          105 RIDILINCAA  114 (277)
T ss_dssp             CCCEEEECCC
T ss_pred             CCCEEEECCc
Confidence            8999999998

>2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens}

Probab=96.87  E-value=0.0037  Score=56.04  Aligned_cols=90  Identities=20%  Similarity=0.231  Sum_probs=68.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++. .+ +..|++.    .+   +.++..+.|+|+.++....  
T Consensus       163 l~g~tvgIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-~~~g~~~----~~---l~ell~~aDvV~l~~P~t~~t  233 (335)
T 2g76_A          163 LNGKTLGILGLGRIGREVATRMQSFGMKTIGYDPIISPE-VS-ASFGVQQ----LP---LEEIWPLCDFITVHTPLLPST  233 (335)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSSCHH-HH-HHTTCEE----CC---HHHHGGGCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hh-hhcCcee----CC---HHHHHhcCCEEEEecCCCHHH
Confidence            468899999999999999999999999999999877653 44 5678642    12   2334456999999887532  


Q ss_pred             --hH-HHHHHhcccCCEEEEEcCC
Q 019199          257 --PF-DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       257 --~~-~~~~~~l~~~G~iv~~g~~  277 (344)
                        .+ ...++.+++++.++.++..
T Consensus       234 ~~li~~~~l~~mk~gailIN~arg  257 (335)
T 2g76_A          234 TGLLNDNTFAQCKKGVRVVNCARG  257 (335)
T ss_dssp             TTSBCHHHHTTSCTTEEEEECSCT
T ss_pred             HHhhCHHHHhhCCCCcEEEECCCc
Confidence              12 4678899999999988743

>2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A*

Probab=96.87  E-value=0.0054  Score=52.71  Aligned_cols=125  Identities=19%  Similarity=0.224  Sum_probs=73.3

Q ss_pred             ceEEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh
Q 019199          144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL  223 (344)
Q Consensus       144 ~~~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~  223 (344)
                      ...+.+++++.+..... +.. ......+...  ++++++||-+|+|. |..++.+++ .|++|++++.++...+.+++.
T Consensus        88 ~~~~~l~p~~~fgtg~~-~tt-~~~~~~l~~~--~~~~~~VLDiGcG~-G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n  161 (254)
T 2nxc_A           88 EIPLVIEPGMAFGTGHH-ETT-RLALKALARH--LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEAN  161 (254)
T ss_dssp             SEEEECCCC-----CCS-HHH-HHHHHHHHHH--CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHH
T ss_pred             ceEEEECCCccccCCCC-HHH-HHHHHHHHHh--cCCCCEEEEecCCC-cHHHHHHHH-hCCeEEEEECCHHHHHHHHHH
Confidence            44566666655443321 111 0112233333  47899999999875 777777666 577999999999877666432


Q ss_pred             ---CCCc-EEEeCCCHHHHHHh-cCCccEEEECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          224 ---LGAD-KFVVSSDLEQMKAL-GKSLDFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       224 ---~g~~-~~v~~~~~~~~~~~-~~~~dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         .+.. .++.. +..  ... .+.+|+|+.....   ...+..+.+.|+|+|+++..+..
T Consensus       162 ~~~~~~~v~~~~~-d~~--~~~~~~~fD~Vv~n~~~~~~~~~l~~~~~~LkpgG~lils~~~  220 (254)
T 2nxc_A          162 AKRNGVRPRFLEG-SLE--AALPFGPFDLLVANLYAELHAALAPRYREALVPGGRALLTGIL  220 (254)
T ss_dssp             HHHTTCCCEEEES-CHH--HHGGGCCEEEEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             HHHcCCcEEEEEC-Chh--hcCcCCCCCEEEECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence               3432 22222 221  112 3679999865432   23467778899999999987643

>3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334}

Probab=96.87  E-value=0.0041  Score=51.99  Aligned_cols=91  Identities=20%  Similarity=0.147  Sum_probs=62.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCCHHHHHHhcCCccEEEECCCCc-----
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKALGKSLDFIIDTASGD-----  255 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~~g~~-----  255 (344)
                      +|||+|+ |.+|..++..+...|.+|+++++++++...+ ...+...+ .|..+.+.  +..+++|+||++.|..     
T Consensus         2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~-~~~~~~~~~~D~~d~~~--~~~~~~d~vi~~ag~~~~~~~   78 (224)
T 3h2s_A            2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADR-LGATVATLVKEPLVLTE--ADLDSVDAVVDALSVPWGSGR   78 (224)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-TCTTSEEEECCGGGCCH--HHHTTCSEEEECCCCCTTSSC
T ss_pred             EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEecccccccc-cCCCceEEecccccccH--hhcccCCEEEECCccCCCcch
Confidence            5899998 9999999999998999999999998877654 22333322 13333323  3346799999999862     


Q ss_pred             -----hhHHHHHHhccc-CCEEEEEcC
Q 019199          256 -----HPFDAYMSLLKV-AGVYVLVGF  276 (344)
Q Consensus       256 -----~~~~~~~~~l~~-~G~iv~~g~  276 (344)
                           .....+++.++. +++++.++.
T Consensus        79 ~~~n~~~~~~l~~a~~~~~~~~v~~SS  105 (224)
T 3h2s_A           79 GYLHLDFATHLVSLLRNSDTLAVFILG  105 (224)
T ss_dssp             THHHHHHHHHHHHTCTTCCCEEEEECC
T ss_pred             hhHHHHHHHHHHHHHHHcCCcEEEEec
Confidence                 123455555543 478888854

>3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405}

Probab=96.86  E-value=0.0021  Score=52.74  Aligned_cols=99  Identities=12%  Similarity=0.117  Sum_probs=67.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHHHH-HhcCCccEEE
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQMK-ALGKSLDFII  249 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~~~-~~~~~~dvvi  249 (344)
                      ++++++||-+|+|. |..+..+++..+  .+|++++.+++..+.+++.   .|.  ...+...+...+. ...+.+|+|+
T Consensus        20 ~~~~~~vLDlGcG~-G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~fD~v~   98 (197)
T 3eey_A           20 VKEGDTVVDATCGN-GNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKDGHQNMDKYIDCPVKAVM   98 (197)
T ss_dssp             CCTTCEEEESCCTT-SHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECSCGGGGGGTCCSCEEEEE
T ss_pred             CCCCCEEEEcCCCC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHhhhccCCceEEE
Confidence            48899999999875 778888888864  5999999998877666433   232  2222223322222 2236799998


Q ss_pred             ECCCC---------------chhHHHHHHhcccCCEEEEEcCC
Q 019199          250 DTASG---------------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       250 d~~g~---------------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...+-               ...+..+.+.|+++|+++.....
T Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~~  141 (197)
T 3eey_A           99 FNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIYY  141 (197)
T ss_dssp             EEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             EcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEcc
Confidence            65432               13588899999999999887543

>3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus}

Probab=96.86  E-value=0.0018  Score=56.23  Aligned_cols=74  Identities=16%  Similarity=0.106  Sum_probs=52.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.++++.+. .... ....|-.+.+.+.+.       .+++|++++
T Consensus        15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn   93 (266)
T 3p19_A           15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN   93 (266)
T ss_dssp             CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence            4678999998 99999999999899999999999887665431 1111 122355555444332       268999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        94 nAg~   97 (266)
T 3p19_A           94 NAGM   97 (266)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9884

>3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B*

Probab=96.86  E-value=0.0044  Score=54.13  Aligned_cols=80  Identities=24%  Similarity=0.272  Sum_probs=57.9

Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCc
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~  245 (344)
                      .+|...+.--.+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++.   ...+...+      +..++
T Consensus       115 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~------l~~~a  188 (281)
T 3o8q_A          115 QDLLAQQVLLKGATILLIGAGGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ------LKQSY  188 (281)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG------CCSCE
T ss_pred             HHHHHhCCCccCCEEEEECchHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH------hcCCC
Confidence            345444332468899999999999999998888997 999999999887776566653   22332221      22679


Q ss_pred             cEEEECCCCc
Q 019199          246 DFIIDTASGD  255 (344)
Q Consensus       246 dvvid~~g~~  255 (344)
                      |++|++++..
T Consensus       189 DiIInaTp~g  198 (281)
T 3o8q_A          189 DVIINSTSAS  198 (281)
T ss_dssp             EEEEECSCCC
T ss_pred             CEEEEcCcCC
Confidence            9999999764

>2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8}

Probab=96.86  E-value=0.0056  Score=51.94  Aligned_cols=74  Identities=19%  Similarity=0.141  Sum_probs=51.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHh---CCCc----EEEeCCCHHHHHHh-------cCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSL---LGAD----KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~----~~v~~~~~~~~~~~-------~~~  244 (344)
                      +.++||+|+ |++|.+.++.+...|++|+++ +++.++.+.+.++   .+..    ...|..+.+.+.+.       .++
T Consensus         1 ~k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   80 (245)
T 2ph3_A            1 MRKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGG   80 (245)
T ss_dssp             CCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCC
Confidence            357899988 999999999998899999998 7777665544222   3432    22355555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        81 ~d~li~~Ag~   90 (245)
T 2ph3_A           81 LDTLVNNAGI   90 (245)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999873

>3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus}

Probab=96.85  E-value=0.0036  Score=52.80  Aligned_cols=72  Identities=18%  Similarity=0.192  Sum_probs=55.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh----cCCccEEEECCCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL----GKSLDFIIDTASG  254 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~----~~~~dvvid~~g~  254 (344)
                      ++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++++..   ...|..+.+.+.+.    ...+|+++++.|.
T Consensus         3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~d~lv~~Ag~   82 (230)
T 3guy_A            3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASHQEVEQLFEQLDSIPSTVVHSAGS   82 (230)
T ss_dssp             CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCHHHHHHHHHSCSSCCSEEEECCCC
T ss_pred             EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCHHHHHHHHHHHhhcCCEEEEeCCc
Confidence            5899998 99999999999999999999999999888876666532   23355666555443    2445999998873

>3m33_A Uncharacterized protein; structural genomics, PSI-2, protein structure initiative, MCSG, midwest center for structural genomics; 2.19A {Deinococcus radiodurans}

Probab=96.85  E-value=0.0016  Score=54.90  Aligned_cols=95  Identities=16%  Similarity=0.134  Sum_probs=67.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-cCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-GKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-~~~~dvvid~~g~~~~  257 (344)
                      .++.+||-+|+|. |..+..+++. +++|+.++.+++.++.+++.......+..+-.+.+... .+.+|+|+....-...
T Consensus        47 ~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~d~~~~~~~~~~~~fD~v~~~~~~~~~  124 (226)
T 3m33_A           47 TPQTRVLEAGCGH-GPDAARFGPQ-AARWAAYDFSPELLKLARANAPHADVYEWNGKGELPAGLGAPFGLIVSRRGPTSV  124 (226)
T ss_dssp             CTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHCTTSEEEECCSCSSCCTTCCCCEEEEEEESCCSGG
T ss_pred             CCCCeEEEeCCCC-CHHHHHHHHc-CCEEEEEECCHHHHHHHHHhCCCceEEEcchhhccCCcCCCCEEEEEeCCCHHHH
Confidence            6789999999864 6777777776 88999999999988888555433333322211111111 3579999987666666


Q ss_pred             HHHHHHhcccCCEEEEEc
Q 019199          258 FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g  275 (344)
                      +..+.+.|+|+|+++..+
T Consensus       125 l~~~~~~LkpgG~l~~~~  142 (226)
T 3m33_A          125 ILRLPELAAPDAHFLYVG  142 (226)
T ss_dssp             GGGHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHcCCCcEEEEeC
Confidence            899999999999999443

>3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis}

Probab=96.85  E-value=0.0026  Score=54.71  Aligned_cols=76  Identities=17%  Similarity=0.178  Sum_probs=54.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++   .+...   ..|-.+.+.+.+.       .++
T Consensus        10 l~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   89 (256)
T 3gaf_A           10 LNDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGK   89 (256)
T ss_dssp             CTTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            35788999998 9999999998888899999999998876555333   34332   2345555444332       258


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        90 id~lv~nAg~   99 (256)
T 3gaf_A           90 ITVLVNNAGG   99 (256)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2

Probab=96.83  E-value=0.011  Score=50.87  Aligned_cols=76  Identities=21%  Similarity=0.133  Sum_probs=52.8

Q ss_pred             CCCCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCchh---HHHHHHhCCCc--EEEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTSK---KEEALSLLGAD--KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~~---~~~~~~~~g~~--~~v~~~~~~~~~~~-------~~  243 (344)
                      ..+.++||+|+   +++|.+.++.+...|++|+++++++..   .+.+.++.+..  ...|-.+.+.+.+.       .+
T Consensus        12 ~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   91 (271)
T 3ek2_A           12 LDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHWD   91 (271)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHCS
T ss_pred             cCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            57889999974   699999999988899999999887543   33333344522  23355555544332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus        92 ~id~lv~nAg~  102 (271)
T 3ek2_A           92 SLDGLVHSIGF  102 (271)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999998874

>1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A*

Probab=96.83  E-value=0.005  Score=52.33  Aligned_cols=73  Identities=21%  Similarity=0.090  Sum_probs=54.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      .+.++||+|+ |.+|..+++.+...  |.+|+++++++++.+.+  ..+.. ...|..+.+.+.+...++|++|.+.+.
T Consensus         3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~--~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~   79 (253)
T 1xq6_A            3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA   79 (253)
T ss_dssp             SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhc--CCCeeEEEecCCCHHHHHHHHcCCCEEEEeccc
Confidence            4678999998 99999999998888  78999999987765433  11232 233556667777666789999998873

>1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7

Probab=96.83  E-value=0.0044  Score=52.18  Aligned_cols=97  Identities=18%  Similarity=0.113  Sum_probs=67.4

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c-EEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D-KFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .+.++++||-+|+|. |..+..+++.. .+|++++.+++..+.+.+.+..  . .++..+..+.. ...+.+|+|+....
T Consensus        67 ~~~~~~~vLdiG~G~-G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~d~~~~~-~~~~~fD~v~~~~~  143 (231)
T 1vbf_A           67 DLHKGQKVLEIGTGI-GYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGY-EEEKPYDRVVVWAT  143 (231)
T ss_dssp             TCCTTCEEEEECCTT-SHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCC-GGGCCEEEEEESSB
T ss_pred             CCCCCCEEEEEcCCC-CHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEECCccccc-ccCCCccEEEECCc
Confidence            448899999999975 77888888764 8999999999888777554431  1 22222211101 11357999987665


Q ss_pred             CchhHHHHHHhcccCCEEEEEcC
Q 019199          254 GDHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      -......+.+.|+++|+++..-.
T Consensus       144 ~~~~~~~~~~~L~pgG~l~~~~~  166 (231)
T 1vbf_A          144 APTLLCKPYEQLKEGGIMILPIG  166 (231)
T ss_dssp             BSSCCHHHHHTEEEEEEEEEEEC
T ss_pred             HHHHHHHHHHHcCCCcEEEEEEc
Confidence            54546788999999999987643

>3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei}

Probab=96.82  E-value=0.0037  Score=54.31  Aligned_cols=75  Identities=19%  Similarity=0.136  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ +++|.+.+..+...|++|+++++++++.+.+.++   .+..   ...|-.+.+.+.+.       .+++
T Consensus        27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i  106 (270)
T 3ftp_A           27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL  106 (270)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence            5678999987 9999999999888999999999998876554333   2321   23355565544332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus       107 D~lvnnAg~  115 (270)
T 3ftp_A          107 NVLVNNAGI  115 (270)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0

Probab=96.82  E-value=0.003  Score=54.57  Aligned_cols=75  Identities=28%  Similarity=0.268  Sum_probs=54.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---C-CcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G-ADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g-~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.+++   + ...   ..|-.+.+.+.+.       .++
T Consensus         9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   88 (262)
T 3pk0_A            9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG   88 (262)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence            5788999987 99999999999899999999999988766553333   3 121   2345555544332       258


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        89 id~lvnnAg~   98 (262)
T 3pk0_A           89 IDVVCANAGV   98 (262)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999883

>2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2

Probab=96.81  E-value=0.0054  Score=52.69  Aligned_cols=73  Identities=21%  Similarity=0.227  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE--EeCCCHHHHHHh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++ +.+.++++. ..  .|-.+.+.+.+.       .+++|+++
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv   82 (256)
T 2d1y_A            5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV   82 (256)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            4678999998 999999999998899999999998877 444344432 22  344555443332       25799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        83 ~~Ag~   87 (256)
T 2d1y_A           83 NNAAI   87 (256)
T ss_dssp             ECCCC
T ss_pred             ECCCC
Confidence            99874

>3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum}

Probab=96.81  E-value=0.01  Score=49.82  Aligned_cols=98  Identities=19%  Similarity=0.210  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCC-HHHHHHh-cCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSD-LEQMKAL-GKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~-~~~~~~~-~~~~dvv  248 (344)
                      +++.+||-+|+| .|..++.+++.+  +.+|+.++.+++..+.+++.   .|..   ..+...+ .+.+... .+.||+|
T Consensus        55 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~gda~~~l~~~~~~~fD~V  133 (221)
T 3dr5_A           55 NGSTGAIAITPA-AGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLSRPLDVMSRLANDSYQLV  133 (221)
T ss_dssp             TTCCEEEEESTT-HHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECSCHHHHGGGSCTTCEEEE
T ss_pred             CCCCCEEEEcCC-chHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEcCHHHHHHHhcCCCcCeE
Confidence            456699999987 488899999986  57999999999877666433   3432   2222222 3333344 4679999


Q ss_pred             EECCCCc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTASGD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |-.....   ..++.+.+.|+|+|.++.-...
T Consensus       134 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn~~  165 (221)
T 3dr5_A          134 FGQVSPMDLKALVDAAWPLLRRGGALVLADAL  165 (221)
T ss_dssp             EECCCTTTHHHHHHHHHHHEEEEEEEEETTTT
T ss_pred             EEcCcHHHHHHHHHHHHHHcCCCcEEEEeCCC
Confidence            8544332   2477888999999999875443

>3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile}

Probab=96.81  E-value=0.018  Score=51.10  Aligned_cols=76  Identities=16%  Similarity=0.187  Sum_probs=52.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HhCCCcEE---EeCCCHHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS------------TSKKEEAL---SLLGADKF---VVSSDLEQMK  239 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~------------~~~~~~~~---~~~g~~~~---v~~~~~~~~~  239 (344)
                      -.|.++||+|+ +++|.++++.+...|++|++++++            .++++...   +..|....   .|-.+.+.+.
T Consensus        44 l~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~  123 (317)
T 3oec_A           44 LQGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQ  123 (317)
T ss_dssp             TTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence            35788999998 999999999999999999998865            33333322   23453322   3555555443


Q ss_pred             Hh-------cCCccEEEECCCC
Q 019199          240 AL-------GKSLDFIIDTASG  254 (344)
Q Consensus       240 ~~-------~~~~dvvid~~g~  254 (344)
                      +.       .+++|++|++.|.
T Consensus       124 ~~~~~~~~~~g~iD~lVnnAg~  145 (317)
T 3oec_A          124 AVVDEALAEFGHIDILVSNVGI  145 (317)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            32       2589999999884

>2gb4_A Thiopurine S-methyltransferase; 18204406, thiopurine methyltransferase, structural genomics, PSI, protein structure initiative; HET: SAH; 1.25A {Mus musculus} PDB: 3bgi_A* 3bgd_A* 2bzg_A* 2h11_A*

Probab=96.81  E-value=0.0033  Score=54.10  Aligned_cols=95  Identities=17%  Similarity=0.056  Sum_probs=62.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---------------------cEEEeCCCHHH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---------------------DKFVVSSDLEQ  237 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---------------------~~~v~~~~~~~  237 (344)
                      .++.+||.+|+|. |..+..+++. |++|++++.+++-++.++++.+.                     ..-+...+...
T Consensus        67 ~~~~~vLD~GCG~-G~~~~~La~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~D~~~  144 (252)
T 2gb4_A           67 QSGLRVFFPLCGK-AIEMKWFADR-GHTVVGVEISEIGIREFFAEQNLSYTEEPLAEIAGAKVFKSSSGSISLYCCSIFD  144 (252)
T ss_dssp             CCSCEEEETTCTT-CTHHHHHHHT-TCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCTTT
T ss_pred             CCCCeEEEeCCCC-cHHHHHHHHC-CCeEEEEECCHHHHHHHHHhcccccccccccccccccccccCCCceEEEECcccc
Confidence            5788999999864 6677777764 89999999999988888555431                     11111111111


Q ss_pred             HHHh-cCCccEEEECCCC-----c---hhHHHHHHhcccCCEEEEEc
Q 019199          238 MKAL-GKSLDFIIDTASG-----D---HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       238 ~~~~-~~~~dvvid~~g~-----~---~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +... .+.||+|++...-     +   ..++.+.+.|+|+|+++.+.
T Consensus       145 l~~~~~~~FD~V~~~~~l~~l~~~~~~~~l~~~~~~LkpGG~l~l~~  191 (252)
T 2gb4_A          145 LPRANIGKFDRIWDRGALVAINPGDHDRYADIILSLLRKEFQYLVAV  191 (252)
T ss_dssp             GGGGCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEE
T ss_pred             CCcccCCCEEEEEEhhhhhhCCHHHHHHHHHHHHHHcCCCeEEEEEE
Confidence            1111 1579999974321     1   23667888999999986543

>3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1}

Probab=96.80  E-value=0.025  Score=50.80  Aligned_cols=90  Identities=18%  Similarity=0.238  Sum_probs=61.9

Q ss_pred             CEEEEECCChHHHHHHHHHH-HC-CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          182 KSLGVIGLGGLGHMAVKFGK-AF-GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~-~~-g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -+|.|+|+|.+|...++.++ .. +++++ +.++++++.+.+.+++|...+++  +.+.+-+ ..++|+|+.+++.....
T Consensus         9 ~~v~iiG~G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~--~~~~~l~-~~~~D~V~i~tp~~~h~   85 (346)
T 3cea_A            9 LRAAIIGLGRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT--NYKDMID-TENIDAIFIVAPTPFHP   85 (346)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES--CHHHHHT-TSCCSEEEECSCGGGHH
T ss_pred             ceEEEEcCCHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC--CHHHHhc-CCCCCEEEEeCChHhHH
Confidence            46889999999998887776 43 66754 56777777766657788754432  2222111 13699999999977667


Q ss_pred             HHHHHhcccCCEEEEEc
Q 019199          259 DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g  275 (344)
                      ..+..+++.+ +.+.+.
T Consensus        86 ~~~~~al~~G-~~v~~e  101 (346)
T 3cea_A           86 EMTIYAMNAG-LNVFCE  101 (346)
T ss_dssp             HHHHHHHHTT-CEEEEC
T ss_pred             HHHHHHHHCC-CEEEEc
Confidence            8888888775 555554

>2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans}

Probab=96.80  E-value=0.0069  Score=51.40  Aligned_cols=97  Identities=22%  Similarity=0.264  Sum_probs=68.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh---------
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL---------  241 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~---------  241 (344)
                      .++.+||-+|+| .|..+..+++..  +.+|+.++.+++..+.+++.   .|..   .++..+..+.+.+.         
T Consensus        59 ~~~~~VLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~~~~~~~~~~~~~~  137 (239)
T 2hnk_A           59 SGAKRIIEIGTF-TGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLGSALETLQVLIDSKSAPSW  137 (239)
T ss_dssp             HTCSEEEEECCT-TCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCSSCCGG
T ss_pred             hCcCEEEEEeCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEECCHHHHHHHHHhhcccccc
Confidence            577899999987 488899999987  56999999998877766443   3432   22222222333332         


Q ss_pred             ------c-CCccEEEECCCCc---hhHHHHHHhcccCCEEEEEcC
Q 019199          242 ------G-KSLDFIIDTASGD---HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       242 ------~-~~~dvvid~~g~~---~~~~~~~~~l~~~G~iv~~g~  276 (344)
                            . +.+|+|+......   ..+..+.+.|+++|+++....
T Consensus       138 ~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~  182 (239)
T 2hnk_A          138 ASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADNV  182 (239)
T ss_dssp             GTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred             cccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEcc
Confidence                  2 5799999776543   346788899999999987643

>3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A*

Probab=96.80  E-value=0.0046  Score=50.09  Aligned_cols=97  Identities=10%  Similarity=0.134  Sum_probs=64.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC--cEEEeCCCHHHHHH-hcCCccEEEEC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA--DKFVVSSDLEQMKA-LGKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~~~v~~~~~~~~~~-~~~~~dvvid~  251 (344)
                      +++|++||-+|+|. |..+..+++. +.+|++++.+++..+.+++..   |.  -.++. .+...+.. ..+.+|+|+-.
T Consensus        20 ~~~~~~vLDiGcG~-G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~~~l~~~~~~~fD~v~~~   96 (185)
T 3mti_A           20 LDDESIVVDATMGN-GNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGHENLDHYVREPIRAAIFN   96 (185)
T ss_dssp             CCTTCEEEESCCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCGGGGGGTCCSCEEEEEEE
T ss_pred             CCCCCEEEEEcCCC-CHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcHHHHHhhccCCcCEEEEe
Confidence            47899999999874 7788888877 889999999998776664433   32  22233 22222221 23569998765


Q ss_pred             CCC-----------c----hhHHHHHHhcccCCEEEEEcCC
Q 019199          252 ASG-----------D----HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       252 ~g~-----------~----~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+.           .    ..+..+.+.|+|+|+++.....
T Consensus        97 ~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~  137 (185)
T 3mti_A           97 LGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIYY  137 (185)
T ss_dssp             EC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC-
T ss_pred             CCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEeC
Confidence            321           1    2247788999999999887544

>2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii}

Probab=96.80  E-value=0.0072  Score=53.72  Aligned_cols=108  Identities=23%  Similarity=0.346  Sum_probs=76.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.+++.++. .+ ++.|+..    .+.+   +...+.|+|+.++....  
T Consensus       140 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~-~~~g~~~----~~l~---ell~~aDvVvl~~P~~~~t  210 (313)
T 2ekl_A          140 LAGKTIGIVGFGRIGTKVGIIANAMGMKVLAYDILDIRE-KA-EKINAKA----VSLE---ELLKNSDVISLHVTVSKDA  210 (313)
T ss_dssp             CTTCEEEEESCSHHHHHHHHHHHHTTCEEEEECSSCCHH-HH-HHTTCEE----CCHH---HHHHHCSEEEECCCCCTTS
T ss_pred             CCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCcchh-HH-HhcCcee----cCHH---HHHhhCCEEEEeccCChHH
Confidence            468899999999999999999999999999999887764 34 5778642    1222   22235899999887432  


Q ss_pred             --hH-HHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          257 --PF-DAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       257 --~~-~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                        .+ ...+..+++++.++.++...-.             +-+.+.+.+.+|.+.
T Consensus       211 ~~li~~~~l~~mk~ga~lIn~arg~~v-------------d~~aL~~aL~~g~i~  252 (313)
T 2ekl_A          211 KPIIDYPQFELMKDNVIIVNTSRAVAV-------------NGKALLDYIKKGKVY  252 (313)
T ss_dssp             CCSBCHHHHHHSCTTEEEEESSCGGGB-------------CHHHHHHHHHTTCEE
T ss_pred             HHhhCHHHHhcCCCCCEEEECCCCccc-------------CHHHHHHHHHcCCCc
Confidence              12 5677889999988888643111             134566666776663

>2c2x_A Methylenetetrahydrofolate dehydrogenase- methenyltetrahydrofolate cyclohydrolase; NADP; 2.0A {Mycobacterium tuberculosis} PDB: 2c2y_A

Probab=96.79  E-value=0.0044  Score=53.63  Aligned_cols=96  Identities=21%  Similarity=0.282  Sum_probs=70.9

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGADKFVVSSDL  235 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~  235 (344)
                      ..+||+...+...+.....--.|.+++|+|.| .+|..+++++...  |++|+++.+..+.+..                
T Consensus       136 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVvG~s~iVG~p~A~lL~~~g~~atVtv~h~~t~~L~~----------------  199 (281)
T 2c2x_A          136 APLPCTPRGIVHLLRRYDISIAGAHVVVIGRGVTVGRPLGLLLTRRSENATVTLCHTGTRDLPA----------------  199 (281)
T ss_dssp             CCCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHTSTTTCCEEEEECTTCSCHHH----------------
T ss_pred             CCCCChHHHHHHHHHHcCCCCCCCEEEEECCCcHHHHHHHHHHhcCCCCCEEEEEECchhHHHH----------------
Confidence            35677766677777766644689999999996 5799999999988  8999998765543322                


Q ss_pred             HHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          236 EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       236 ~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                           ..+.+|++|.++|.+..+  --++++++..++++|..
T Consensus       200 -----~~~~ADIVI~Avg~p~~I--~~~~vk~GavVIDVgi~  234 (281)
T 2c2x_A          200 -----LTRQADIVVAAVGVAHLL--TADMVRPGAAVIDVGVS  234 (281)
T ss_dssp             -----HHTTCSEEEECSCCTTCB--CGGGSCTTCEEEECCEE
T ss_pred             -----HHhhCCEEEECCCCCccc--CHHHcCCCcEEEEccCC
Confidence                 235589999999987522  23457888888888765

>3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans}

Probab=96.79  E-value=0.0037  Score=54.56  Aligned_cols=75  Identities=20%  Similarity=0.184  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC---cE---EEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA---DK---FVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~---~v~~~~~~~~~~~-------~  242 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++   +.   ..   ..|-.+.+.+.+.       .
T Consensus        10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   89 (281)
T 3svt_A           10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH   89 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence            5788999997 99999999998889999999999988765553332   32   11   1245555444332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++++.|.
T Consensus        90 g~id~lv~nAg~  101 (281)
T 3svt_A           90 GRLHGVVHCAGG  101 (281)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999999885

>2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A*

Probab=96.79  E-value=0.0049  Score=52.39  Aligned_cols=75  Identities=19%  Similarity=0.195  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++    .+...   ..|..+.+.+.+.       .++
T Consensus         6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (248)
T 2pnf_A            6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG   85 (248)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 9999999999888999999999988766554332    34322   2244555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        86 ~d~vi~~Ag~   95 (248)
T 2pnf_A           86 IDILVNNAGI   95 (248)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp}

Probab=96.79  E-value=0.013  Score=50.11  Aligned_cols=98  Identities=17%  Similarity=0.218  Sum_probs=67.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHhc--CCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKALG--KSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~--~~~dvv  248 (344)
                      .++.+||-+|+|. |..++.+++.+  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+....  +.||+|
T Consensus        62 ~~~~~VLdiG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~~~~l~~~~~~~~fD~V  140 (248)
T 3tfw_A           62 TQAKRILEIGTLG-GYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREGPALQSLESLGECPAFDLI  140 (248)
T ss_dssp             HTCSEEEEECCTT-SHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHTCCSCCCCSEE
T ss_pred             cCCCEEEEecCCc-hHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHhcCCCCCeEEE
Confidence            5778999999874 88888999887  469999999998777664332   432   223333233344443  379999


Q ss_pred             EECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +-....   ...+..+.+.|+|+|.++.....
T Consensus       141 ~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~~  172 (248)
T 3tfw_A          141 FIDADKPNNPHYLRWALRYSRPGTLIIGDNVV  172 (248)
T ss_dssp             EECSCGGGHHHHHHHHHHTCCTTCEEEEECCS
T ss_pred             EECCchHHHHHHHHHHHHhcCCCeEEEEeCCC
Confidence            843332   23477888999999999876544

>1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2

Probab=96.79  E-value=0.0046  Score=53.66  Aligned_cols=96  Identities=18%  Similarity=0.105  Sum_probs=71.8

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCC-hHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLG-GLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag-~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ..+||+.......+.....--.|.+++|+|.| .+|.-+++++...|++|+++.+..+.+...                 
T Consensus       137 ~~~PcTp~gi~~ll~~~~i~l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~~L~~~-----------------  199 (288)
T 1b0a_A          137 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH-----------------  199 (288)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-----------------
T ss_pred             CCCCCcHHHHHHHHHHcCCCCCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCchhHHHH-----------------
Confidence            35677766666667666655689999999996 689999999999999999998665444332                 


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                          .+.+|++|.++|.+..+.  -++++++..++++|..
T Consensus       200 ----~~~ADIVI~Avg~p~lI~--~~~vk~GavVIDVgi~  233 (288)
T 1b0a_A          200 ----VENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  233 (288)
T ss_dssp             ----HHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ----hccCCEEEECCCCcCcCC--HHHcCCCcEEEEccCC
Confidence                234899999999875222  2357899999999865

>3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C*

Probab=96.79  E-value=0.0027  Score=54.40  Aligned_cols=116  Identities=16%  Similarity=0.159  Sum_probs=78.8

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC---CC-c-EEEeCCCHHHHHHh-cCCc
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL---GA-D-KFVVSSDLEQMKAL-GKSL  245 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~---g~-~-~~v~~~~~~~~~~~-~~~~  245 (344)
                      ....++++++||.+|+|. |..+..+++..  +.+|+.++.+++..+.+++.+   |. + ..+...+..  ... ...+
T Consensus        87 ~~~~~~~~~~vldiG~G~-G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~--~~~~~~~~  163 (255)
T 3mb5_A           87 AYAGISPGDFIVEAGVGS-GALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLKDIY--EGIEEENV  163 (255)
T ss_dssp             HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECSCGG--GCCCCCSE
T ss_pred             HhhCCCCCCEEEEecCCc-hHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEECchh--hccCCCCc
Confidence            334458999999999875 88888899885  569999999988877774432   42 2 222222221  112 2469


Q ss_pred             cEEEECCCCc-hhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCC
Q 019199          246 DFIIDTASGD-HPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHK  306 (344)
Q Consensus       246 dvvid~~g~~-~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~  306 (344)
                      |+|+.....+ ..+..+.+.|+++|+++.....              .+..+++.+++.+..
T Consensus       164 D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~~--------------~~~~~~~~~~l~~~g  211 (255)
T 3mb5_A          164 DHVILDLPQPERVVEHAAKALKPGGFFVAYTPC--------------SNQVMRLHEKLREFK  211 (255)
T ss_dssp             EEEEECSSCGGGGHHHHHHHEEEEEEEEEEESS--------------HHHHHHHHHHHHHTG
T ss_pred             CEEEECCCCHHHHHHHHHHHcCCCCEEEEEECC--------------HHHHHHHHHHHHHcC
Confidence            9999877654 3699999999999999887422              223556666666554

>3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A

Probab=96.79  E-value=0.003  Score=57.01  Aligned_cols=90  Identities=21%  Similarity=0.246  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-hh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-HP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-~~  257 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.+++....+.+ ++.|...+   .+   +.++....|+|+.++... .+
T Consensus       162 l~gktvGIIG~G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~---~~---l~ell~~aDvV~l~~Plt~~t  234 (351)
T 3jtm_A          162 LEGKTIGTVGAGRIGKLLLQRLKPFGCNLLYHDRLQMAPELE-KETGAKFV---ED---LNEMLPKCDVIVINMPLTEKT  234 (351)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCEEEEECSSCCCHHHH-HHHCCEEC---SC---HHHHGGGCSEEEECSCCCTTT
T ss_pred             ccCCEEeEEEeCHHHHHHHHHHHHCCCEEEEeCCCccCHHHH-HhCCCeEc---CC---HHHHHhcCCEEEECCCCCHHH
Confidence            468899999999999999999999999999999886555555 46675432   12   233445689998877632 11


Q ss_pred             ----HHHHHHhcccCCEEEEEc
Q 019199          258 ----FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g  275 (344)
                          -...++.|+++..+|.++
T Consensus       235 ~~li~~~~l~~mk~gailIN~a  256 (351)
T 3jtm_A          235 RGMFNKELIGKLKKGVLIVNNA  256 (351)
T ss_dssp             TTCBSHHHHHHSCTTEEEEECS
T ss_pred             HHhhcHHHHhcCCCCCEEEECc
Confidence                256778899998888776

>2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa}

Probab=96.78  E-value=0.0038  Score=54.37  Aligned_cols=75  Identities=21%  Similarity=0.218  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--cEE---EeCCCHHHHHHh-------cCCcc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--DKF---VVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~~~---v~~~~~~~~~~~-------~~~~d  246 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++..  ...   .|-.+.+.+.+.       .+++|
T Consensus        28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD  107 (276)
T 2b4q_A           28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELSARLD  107 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHCSCCS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhcCCCC
Confidence            4678999998 9999999999988999999999998876655444321  211   244555443332       25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      ++|++.|.
T Consensus       108 ~lvnnAg~  115 (276)
T 2b4q_A          108 ILVNNAGT  115 (276)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999873

>3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans}

Probab=96.78  E-value=0.0071  Score=51.81  Aligned_cols=74  Identities=16%  Similarity=0.170  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++++.++.+.+.++   .+...   ..|..+.+.+.+.       .+++
T Consensus        12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   91 (260)
T 3awd_A           12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV   91 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            5688999998 9999999999988999999999988765544232   34322   2344555444332       2579


Q ss_pred             cEEEECCC
Q 019199          246 DFIIDTAS  253 (344)
Q Consensus       246 dvvid~~g  253 (344)
                      |++|++.|
T Consensus        92 d~vi~~Ag   99 (260)
T 3awd_A           92 DILVACAG   99 (260)
T ss_dssp             CEEEECCC
T ss_pred             CEEEECCC
Confidence            99999887

>1leh_A Leucine dehydrogenase; oxidoreductase; 2.20A {Lysinibacillus sphaericus} SCOP: c.2.1.7 c.58.1.1

Probab=96.78  E-value=0.0043  Score=56.24  Aligned_cols=92  Identities=18%  Similarity=0.146  Sum_probs=61.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-------------EeCCC-----HHHHHH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-------------VVSSD-----LEQMKA  240 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-------------v~~~~-----~~~~~~  240 (344)
                      -.|.+|+|.|.|.+|..+++.+...|++|++.+.+.+++..+.+++|++.+             +....     .+.++.
T Consensus       171 L~GktV~V~G~G~VG~~~A~~L~~~GakVvv~D~~~~~l~~~a~~~ga~~v~~~~ll~~~~DIvip~a~~~~I~~~~~~~  250 (364)
T 1leh_A          171 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGADAVAPNAIYGVTCDIFAPCALGAVLNDFTIPQ  250 (364)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCEECCGGGTTTCCCSEEEECSCSCCBSTTHHHH
T ss_pred             CCcCEEEEECchHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCCEEEChHHHhccCCcEeeccchHHHhCHHHHHh
Confidence            578999999999999999999999999999999888887766566665322             11000     011111


Q ss_pred             hcCCccEEEECCCCchhHHHHHHhcccCCEEE
Q 019199          241 LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYV  272 (344)
Q Consensus       241 ~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv  272 (344)
                      +  +..+|++.+..+.+.+.+.+.++..|.++
T Consensus       251 l--g~~iV~e~An~p~t~~ea~~~L~~~Gi~~  280 (364)
T 1leh_A          251 L--KAKVIAGSADNQLKDPRHGKYLHELGIVY  280 (364)
T ss_dssp             C--CCSEECCSCSCCBSSHHHHHHHHHHTCEE
T ss_pred             C--CCcEEEeCCCCCcccHHHHHHHHhCCCEE
Confidence            1  45666666665543445666666666544

>2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A*

Probab=96.76  E-value=0.0049  Score=53.02  Aligned_cols=75  Identities=17%  Similarity=0.165  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .+...   ..|..+.+.+.+.       .+++
T Consensus        13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   92 (260)
T 2zat_A           13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV   92 (260)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence            4688999998 9999999999988999999999998766544332   34322   2344555443332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        93 D~lv~~Ag~  101 (260)
T 2zat_A           93 DILVSNAAV  101 (260)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999873

>3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium}

Probab=96.75  E-value=0.0053  Score=53.49  Aligned_cols=72  Identities=25%  Similarity=0.245  Sum_probs=54.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~------~~~~dvvi  249 (344)
                      .|.++||+|+ +++|.+.++.+...|++|++++++.++.+.+.++++...   ..|-.+.+.+.+.      .+++|+++
T Consensus        29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv  108 (281)
T 3ppi_A           29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV  108 (281)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence            5678999998 999999999988899999999999998887767776432   2344555444332      14789999


Q ss_pred             EC
Q 019199          250 DT  251 (344)
Q Consensus       250 d~  251 (344)
                      .+
T Consensus       109 ~~  110 (281)
T 3ppi_A          109 VA  110 (281)
T ss_dssp             EC
T ss_pred             Ec
Confidence            87

>1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A*

Probab=96.75  E-value=0.0068  Score=53.20  Aligned_cols=42  Identities=19%  Similarity=0.041  Sum_probs=35.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHH
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEAL  221 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~  221 (344)
                      .+.++||+|+ |++|.+.++.+...|++|++++ ++.++.+.+.
T Consensus         8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~   51 (291)
T 1e7w_A            8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS   51 (291)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence            4678999987 9999999999988999999999 8887665543

>2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A*

Probab=96.75  E-value=0.0067  Score=54.60  Aligned_cols=76  Identities=18%  Similarity=0.161  Sum_probs=57.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHC-CC-eEEEEeCCchhHHHHHHhCC---Cc-EEEeCCCHHHHHHhcCCccEEEECC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAF-GL-NVTVLSTSTSKKEEALSLLG---AD-KFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~-g~-~V~~~~~~~~~~~~~~~~~g---~~-~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .+.+|||+|+ |.+|..+++.+... |. +|+++++++++...+.+.+.   .. ...|..+.+.+.+...++|+||.++
T Consensus        20 ~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~D~Vih~A   99 (344)
T 2gn4_A           20 DNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDLERLNYALEGVDICIHAA   99 (344)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCHHHHHHHTTTCSEEEECC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCHHHHHHHHhcCCEEEECC
Confidence            4678999997 99999999888877 98 99999999887766544442   11 1235566777777667899999998


Q ss_pred             CCc
Q 019199          253 SGD  255 (344)
Q Consensus       253 g~~  255 (344)
                      +..
T Consensus       100 a~~  102 (344)
T 2gn4_A          100 ALK  102 (344)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            753

>3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A*

Probab=96.74  E-value=0.01  Score=53.28  Aligned_cols=75  Identities=17%  Similarity=0.086  Sum_probs=54.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh----HHHHHHh------CCCc-EEEeCCCHHHHHHhcCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK----KEEALSL------LGAD-KFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~----~~~~~~~------~g~~-~~v~~~~~~~~~~~~~~~dv  247 (344)
                      .+.+|||+|+ |.+|..++..+...|.+|+++++....    ...+...      -+.. ...|..+.+.+.+...++|+
T Consensus        24 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  103 (351)
T 3ruf_A           24 SPKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVKTLVSTEQWSRFCFIEGDIRDLTTCEQVMKGVDH  103 (351)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHTSCHHHHTTEEEEECCTTCHHHHHHHTTTCSE
T ss_pred             CCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhhhccccccCCceEEEEccCCCHHHHHHHhcCCCE
Confidence            4578999998 999999999999999999999986542    2333111      1222 12355667777777678999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ||.+.+.
T Consensus       104 Vih~A~~  110 (351)
T 3ruf_A          104 VLHQAAL  110 (351)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999984

>1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2

Probab=96.74  E-value=0.0077  Score=52.19  Aligned_cols=75  Identities=17%  Similarity=0.218  Sum_probs=54.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.++   .|...   ..|-.+.+.+.+.       .+++
T Consensus        30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i  109 (272)
T 1yb1_A           30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV  109 (272)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence            4678999998 9999999999988999999999998776554333   24322   2344555443332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus       110 D~li~~Ag~  118 (272)
T 1yb1_A          110 SILVNNAGV  118 (272)
T ss_dssp             SEEEECCCC
T ss_pred             cEEEECCCc
Confidence            999999874

>3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A*

Probab=96.74  E-value=0.0061  Score=52.15  Aligned_cols=72  Identities=15%  Similarity=0.171  Sum_probs=54.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      ++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++++...   ..|-.+.+.+.+.       .+++|+++++
T Consensus         2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn   81 (248)
T 3asu_A            2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN   81 (248)
T ss_dssp             EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred             EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence            5788887 999999999998899999999999888777655555322   2355565554443       1479999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        82 Ag~   84 (248)
T 3asu_A           82 AGL   84 (248)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            873

>2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A*

Probab=96.74  E-value=0.0038  Score=54.30  Aligned_cols=94  Identities=12%  Similarity=0.153  Sum_probs=64.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc---
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD---  255 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~---  255 (344)
                      +|||+|+ |.+|...++.+...  |.+|+++++++++...+ ...+... ..|..+.+.+.+...++|+||.+.+..   
T Consensus         1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~d~vi~~a~~~~~~   79 (286)
T 2zcu_A            1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQAL-AAQGITVRQADYGDEAALTSALQGVEKLLLISSSEVGQ   79 (286)
T ss_dssp             CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEECC------
T ss_pred             CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhh-hcCCCeEEEcCCCCHHHHHHHHhCCCEEEEeCCCCchH
Confidence            3789998 99999999988877  88999999988766554 2344432 235566777777767899999988742   


Q ss_pred             --hhHHHHHHhcccC--CEEEEEcCC
Q 019199          256 --HPFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       256 --~~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                        .....+++.++..  ++++.++..
T Consensus        80 ~~~~~~~l~~a~~~~~~~~~v~~Ss~  105 (286)
T 2zcu_A           80 RAPQHRNVINAAKAAGVKFIAYTSLL  105 (286)
T ss_dssp             --CHHHHHHHHHHHHTCCEEEEEEET
T ss_pred             HHHHHHHHHHHHHHcCCCEEEEECCC
Confidence              1244555555432  588887654

>2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus}

Probab=96.73  E-value=0.0049  Score=52.53  Aligned_cols=74  Identities=20%  Similarity=0.106  Sum_probs=53.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      +.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.+++    +...   ..|..+.+.+.+.       .+++
T Consensus         2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   81 (250)
T 2cfc_A            2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI   81 (250)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence            568999998 99999999999889999999999988776554433    3221   2344555444332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        82 d~li~~Ag~   90 (250)
T 2cfc_A           82 DVLVNNAGI   90 (250)
T ss_dssp             CEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998873

>3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A*

Probab=96.73  E-value=0.0055  Score=52.41  Aligned_cols=75  Identities=21%  Similarity=0.302  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-chhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++ .++.+.+.++   .+...   ..|..+.+.+.+.       .++
T Consensus         6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~   85 (258)
T 3afn_B            6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG   85 (258)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 999999999998899999999998 6665544333   24321   2345555544332       148


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        86 id~vi~~Ag~   95 (258)
T 3afn_B           86 IDVLINNAGG   95 (258)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D

Probab=96.72  E-value=0.0035  Score=54.60  Aligned_cols=94  Identities=12%  Similarity=0.120  Sum_probs=66.2

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc---
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD---  255 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~---  255 (344)
                      +|||+|+ |.+|..+++.+...  |.+|+++++++++...+ ...+... ..|..+.+.+.+.-.++|+||.+.+..   
T Consensus         2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~~~~   80 (287)
T 2jl1_A            2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTL-ADQGVEVRHGDYNQPESLQKAFAGVSKLLFISGPHYDN   80 (287)
T ss_dssp             CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHH-HHTTCEEEECCTTCHHHHHHHTTTCSEEEECCCCCSCH
T ss_pred             eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHH-hhcCCeEEEeccCCHHHHHHHHhcCCEEEEcCCCCcCc
Confidence            5899998 99999999888877  88999999988776555 3344432 235566777777667899999988742   


Q ss_pred             ----hhHHHHHHhcccC--CEEEEEcCC
Q 019199          256 ----HPFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       256 ----~~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                          .....+++.++..  ++++.++..
T Consensus        81 ~~n~~~~~~l~~a~~~~~~~~~v~~Ss~  108 (287)
T 2jl1_A           81 TLLIVQHANVVKAARDAGVKHIAYTGYA  108 (287)
T ss_dssp             HHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred             hHHHHHHHHHHHHHHHcCCCEEEEECCC
Confidence                1233455555443  488887654

>2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A

Probab=96.71  E-value=0.011  Score=50.95  Aligned_cols=69  Identities=22%  Similarity=0.109  Sum_probs=49.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++      ..... ...|..+.+.+.+.       .+++|++++
T Consensus         7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~   80 (264)
T 2dtx_A            7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN   80 (264)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999998 999999999999999999999988664      11111 12355555544332       257999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        81 ~Ag~   84 (264)
T 2dtx_A           81 NAGI   84 (264)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9873

>4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum}

Probab=96.71  E-value=0.0063  Score=52.86  Aligned_cols=76  Identities=18%  Similarity=0.237  Sum_probs=55.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEE---EeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKF---VVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~---v~~~~~~~~~~~-------~~~  244 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++   |....   .|-.+.+.+.+.       .++
T Consensus        24 l~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~  103 (271)
T 4ibo_A           24 LGGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQGID  103 (271)
T ss_dssp             CTTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHCCC
Confidence            35788999988 99999999999899999999999988766554433   43322   244455443332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus       104 iD~lv~nAg~  113 (271)
T 4ibo_A          104 VDILVNNAGI  113 (271)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G

Probab=96.70  E-value=0.012  Score=49.77  Aligned_cols=74  Identities=20%  Similarity=0.168  Sum_probs=50.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      |.++||+|+ |++|.+.++.+...|++|+++ .+++++.+.+.++   .+...   ..|..+.+.+.+.       .+++
T Consensus         1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i   80 (244)
T 1edo_A            1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI   80 (244)
T ss_dssp             CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred             CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence            467899988 999999999999999999985 6776665443222   24322   2344555444332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++|++.|.
T Consensus        81 d~li~~Ag~   89 (244)
T 1edo_A           81 DVVVNNAGI   89 (244)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999998874

>2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2

Probab=96.70  E-value=0.0035  Score=53.49  Aligned_cols=74  Identities=19%  Similarity=0.179  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-Cc-EEEeCCCHHHHHHh---cCCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-AD-KFVVSSDLEQMKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~~---~~~~dvvid~~g  253 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+. +++ .. ...|..+.+.+.+.   .+++|+++++.|
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~~~id~lv~~Ag   83 (246)
T 2ag5_A            5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (246)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCHHHHHHHHHHhCCCCEEEECCc
Confidence            4678999998 99999999999889999999999887766553 332 11 12355565554443   367999999987


Q ss_pred             C
Q 019199          254 G  254 (344)
Q Consensus       254 ~  254 (344)
                      .
T Consensus        84 ~   84 (246)
T 2ag5_A           84 F   84 (246)
T ss_dssp             C
T ss_pred             c
Confidence            4

>1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A

Probab=96.69  E-value=0.0063  Score=52.45  Aligned_cols=75  Identities=25%  Similarity=0.295  Sum_probs=53.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh--------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL--------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~--------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .+...   ..|..+.+.+.+.        .++
T Consensus        13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~   92 (266)
T 1xq1_A           13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   92 (266)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence            4678999988 9999999999988999999999988766554333   24322   2344555443332        167


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        93 id~li~~Ag~  102 (266)
T 1xq1_A           93 LDILINNLGA  102 (266)
T ss_dssp             CSEEEEECCC
T ss_pred             CcEEEECCCC
Confidence            9999998874

>1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A*

Probab=96.69  E-value=0.0063  Score=53.08  Aligned_cols=101  Identities=24%  Similarity=0.292  Sum_probs=68.1

Q ss_pred             HhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC--cEEEeCCCHHHHHHhcCCccE
Q 019199          173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA--DKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       173 ~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      .....+.++.+||-+|+|. |..+..+++..|++|++++.+++..+.+.+.+   |.  ...+...+..   ...+.+|+
T Consensus        57 ~~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~---~~~~~fD~  132 (287)
T 1kpg_A           57 LGKLGLQPGMTLLDVGCGW-GATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGWE---QFDEPVDR  132 (287)
T ss_dssp             HTTTTCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCGG---GCCCCCSE
T ss_pred             HHHcCCCCcCEEEEECCcc-cHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEECChh---hCCCCeeE
Confidence            3344458899999999875 77888888777999999999998777774432   21  1112122221   12267999


Q ss_pred             EEEC-----CCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDT-----ASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~-----~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+..     .+.   ...+..+.+.|+|+|+++.....
T Consensus       133 v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  170 (287)
T 1kpg_A          133 IVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTIT  170 (287)
T ss_dssp             EEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEEE
T ss_pred             EEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEec
Confidence            9864     221   23477888999999999876543

>1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A*

Probab=96.69  E-value=0.011  Score=50.58  Aligned_cols=73  Identities=14%  Similarity=0.010  Sum_probs=49.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCc-EEEeCCCHHH-HHHh---cCCccEEEECCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGAD-KFVVSSDLEQ-MKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~-~~v~~~~~~~-~~~~---~~~~dvvid~~g  253 (344)
                      .++||+|+ |++|.+.++.+...|++|+++++++++.+.+.  +..|.+ ..++..+.+. .++.   .+++|+++++.|
T Consensus         2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~g~iD~lv~nAg   81 (254)
T 1zmt_A            2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   81 (254)
T ss_dssp             CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHhCCCCEEEECCC
Confidence            36889987 99999999999999999999999887665442  222432 2224444322 2222   267999999887


Q ss_pred             C
Q 019199          254 G  254 (344)
Q Consensus       254 ~  254 (344)
                      .
T Consensus        82 ~   82 (254)
T 1zmt_A           82 F   82 (254)
T ss_dssp             C
T ss_pred             c
Confidence            4

>2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2

Probab=96.68  E-value=0.0071  Score=54.12  Aligned_cols=43  Identities=19%  Similarity=0.048  Sum_probs=36.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHH
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALS  222 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~~  222 (344)
                      .+.++||+|+ |++|.++++.+...|++|++++ +++++.+.+.+
T Consensus        45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~~   89 (328)
T 2qhx_A           45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALSA   89 (328)
T ss_dssp             CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHH
Confidence            4678999987 9999999999999999999999 88877655533

>3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum}

Probab=96.68  E-value=0.0075  Score=51.81  Aligned_cols=74  Identities=18%  Similarity=0.198  Sum_probs=52.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhC---CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLL---GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~---g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      +.++||+|+ |++|.+.++.+...|++|++++++.++  .+.+.+++   +...   ..|-.+.+.+.+.       .++
T Consensus         2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   81 (258)
T 3a28_C            2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG   81 (258)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            568999998 999999998888889999999988776  54443332   4322   2355555444332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        82 iD~lv~nAg~   91 (258)
T 3a28_C           82 FDVLVNNAGI   91 (258)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999874

>1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A*

Probab=96.68  E-value=0.0052  Score=53.34  Aligned_cols=75  Identities=16%  Similarity=0.072  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhC----CCcE---EEeCCCH----HHHHHh-----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLL----GADK---FVVSSDL----EQMKAL-----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~----g~~~---~v~~~~~----~~~~~~-----  241 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++ ++++.+.+.+++    |...   ..|-.+.    +.+.+.     
T Consensus        10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~   89 (276)
T 1mxh_A           10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF   89 (276)
T ss_dssp             -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence            4678999987 99999999999889999999999 777665543333    4322   1244444    433332     


Q ss_pred             --cCCccEEEECCCC
Q 019199          242 --GKSLDFIIDTASG  254 (344)
Q Consensus       242 --~~~~dvvid~~g~  254 (344)
                        .+++|++|++.|.
T Consensus        90 ~~~g~id~lv~nAg~  104 (276)
T 1mxh_A           90 RAFGRCDVLVNNASA  104 (276)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HhcCCCCEEEECCCC
Confidence              2579999999873

>1fbn_A MJ fibrillarin homologue; MJ proteins, ribosomal RNA processing, snoRNP, structural genomics, BSGC structure funded by NIH; 1.60A {Methanocaldococcus jannaschii} SCOP: c.66.1.3 PDB: 1g8s_A

Probab=96.68  E-value=0.0075  Score=50.85  Aligned_cols=96  Identities=10%  Similarity=0.102  Sum_probs=65.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCC--cEEE-eC--CCHHHHHHhcCCccEEEEC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA--DKFV-VS--SDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--~~~v-~~--~~~~~~~~~~~~~dvvid~  251 (344)
                      ++++++||-+|+|. |..+..+++..| .+|++++.+++..+.+.+....  ...+ ..  .++.........+|+|+..
T Consensus        72 ~~~~~~VLDlGcG~-G~~~~~la~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~~  150 (230)
T 1fbn_A           72 IKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYED  150 (230)
T ss_dssp             CCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTSCCEEEEEEC
T ss_pred             CCCCCEEEEEcccC-CHHHHHHHHHcCCcEEEEEECCHHHHHHHHHHhhcCCCeEEEECCCCCcccccccCccEEEEEEe
Confidence            47899999999976 888888998876 5999999999877766443321  1111 11  1111101112569999966


Q ss_pred             CCCc---h-hHHHHHHhcccCCEEEEE
Q 019199          252 ASGD---H-PFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       252 ~g~~---~-~~~~~~~~l~~~G~iv~~  274 (344)
                      ...+   . .+..+.+.|+|+|+++..
T Consensus       151 ~~~~~~~~~~l~~~~~~LkpgG~l~i~  177 (230)
T 1fbn_A          151 VAQPNQAEILIKNAKWFLKKGGYGMIA  177 (230)
T ss_dssp             CCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             cCChhHHHHHHHHHHHhCCCCcEEEEE
Confidence            5554   3 377888899999999886

>1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2

Probab=96.67  E-value=0.026  Score=48.13  Aligned_cols=72  Identities=19%  Similarity=0.204  Sum_probs=49.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeC-CCHHHHHHhcCCccEEEECCCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVS-SDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~-~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|++++++++..    ++++.... .|. .+.+.+.+...++|+++++.|.
T Consensus        17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~~iD~lv~~Ag~   91 (249)
T 1o5i_A           17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL----KRSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGG   91 (249)
T ss_dssp             CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH----HHTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCC
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHH----HhhCCeEEEeeHHHHHHHHHHHhcCCCEEEECCCC
Confidence            46788999998 9999999999988999999999887433    34452222 232 1222222223479999999873

>1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21

Probab=96.67  E-value=0.0056  Score=52.32  Aligned_cols=99  Identities=18%  Similarity=0.214  Sum_probs=66.2

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ...+.++.+||-+|+|. |..+..+++..+++|++++.+++.++.+++.   .|..  ..+...+...... .+.+|+|+
T Consensus        31 ~~~~~~~~~VLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~~~~~-~~~fD~V~  108 (256)
T 1nkv_A           31 VLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGYVA-NEKCDVAA  108 (256)
T ss_dssp             HTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTCCC-SSCEEEEE
T ss_pred             hcCCCCCCEEEEECCCC-CHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChHhCCc-CCCCCEEE
Confidence            33458999999999875 7788889988899999999998877666433   3321  2121111111111 35699998


Q ss_pred             ECCC------CchhHHHHHHhcccCCEEEEEc
Q 019199          250 DTAS------GDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       250 d~~g------~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ....      -...+..+.+.|+|+|+++...
T Consensus       109 ~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~  140 (256)
T 1nkv_A          109 CVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  140 (256)
T ss_dssp             EESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ECCChHhcCCHHHHHHHHHHHcCCCeEEEEec
Confidence            5221      2334788889999999998764

>1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A

Probab=96.67  E-value=0.0058  Score=52.19  Aligned_cols=70  Identities=19%  Similarity=0.162  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+ .  +  ...|..+.+.+.+.       .+++|+++++
T Consensus        14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~-~--~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~   88 (247)
T 1uzm_A           14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-F--G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   88 (247)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-E--E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHh-c--C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999997 9999999999988999999999887654332 1  1  33466665544332       2579999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        89 Ag~   91 (247)
T 1uzm_A           89 AGL   91 (247)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str}

Probab=96.66  E-value=0.0058  Score=52.28  Aligned_cols=98  Identities=21%  Similarity=0.240  Sum_probs=61.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHH---hCCCcEE---EeCCCHHHHHHh----------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALS---LLGADKF---VVSSDLEQMKAL----------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~~~---v~~~~~~~~~~~----------  241 (344)
                      .+.++||+|+ +++|.+.++.+...|++|+++ .++.++.+...+   ..+....   .|..+.+.+.+.          
T Consensus         6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   85 (255)
T 3icc_A            6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN   85 (255)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence            5788999998 999999999999999999885 555555444322   2343221   244444333221          


Q ss_pred             ---cCCccEEEECCCCc----------h---------------hHHHHHHhcccCCEEEEEcCC
Q 019199          242 ---GKSLDFIIDTASGD----------H---------------PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       242 ---~~~~dvvid~~g~~----------~---------------~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         .+++|+++++.|..          .               ..+.++..+++.|+++.++..
T Consensus        86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~  149 (255)
T 3icc_A           86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSA  149 (255)
T ss_dssp             HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCG
T ss_pred             cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCCh
Confidence               13499999998742          0               112233345567899998765

>2d5c_A AROE, shikimate 5-dehydrogenase; substrate, dimer, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: SKM; 1.65A {Thermus thermophilus} PDB: 1wxd_A* 2cy0_A* 2ev9_A*

Probab=96.66  E-value=0.0029  Score=54.72  Aligned_cols=89  Identities=17%  Similarity=0.198  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP-  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~-  257 (344)
                      -.| +++|+|+|.+|.+.+..+...|++|++.+++.++.+.+.+++|..  +  .+.   .+. .++|+++.+++.... 
T Consensus       115 l~~-~v~iiG~G~~g~~~a~~l~~~g~~v~v~~r~~~~~~~l~~~~~~~--~--~~~---~~~-~~~Divi~~tp~~~~~  185 (263)
T 2d5c_A          115 LKG-PALVLGAGGAGRAVAFALREAGLEVWVWNRTPQRALALAEEFGLR--A--VPL---EKA-REARLLVNATRVGLED  185 (263)
T ss_dssp             CCS-CEEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHHTCE--E--CCG---GGG-GGCSEEEECSSTTTTC
T ss_pred             CCC-eEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccc--h--hhH---hhc-cCCCEEEEccCCCCCC
Confidence            356 899999999999999999889999999999988877666677753  2  121   233 569999999986520 


Q ss_pred             -HHH--HHHhcccCCEEEEEcC
Q 019199          258 -FDA--YMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 -~~~--~~~~l~~~G~iv~~g~  276 (344)
                       ...  ....++++..+++++.
T Consensus       186 ~~~~~l~~~~l~~g~~viD~~~  207 (263)
T 2d5c_A          186 PSASPLPAELFPEEGAAVDLVY  207 (263)
T ss_dssp             TTCCSSCGGGSCSSSEEEESCC
T ss_pred             CCCCCCCHHHcCCCCEEEEeec
Confidence             001  1456777777777654

>3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0

Probab=96.65  E-value=0.011  Score=50.36  Aligned_cols=76  Identities=24%  Similarity=0.284  Sum_probs=53.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---C--CcEEE--eC--CCHHHHHHh-------
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---G--ADKFV--VS--SDLEQMKAL-------  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g--~~~~v--~~--~~~~~~~~~-------  241 (344)
                      -.|.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++   +  ...++  +.  .+.+.+.+.       
T Consensus        12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~   91 (247)
T 3i1j_A           12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE   91 (247)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence            35788999998 99999999999899999999999988776553332   2  12222  32  344333322       


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                      .+++|+++++.|.
T Consensus        92 ~g~id~lv~nAg~  104 (247)
T 3i1j_A           92 FGRLDGLLHNASI  104 (247)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             CCCCCEEEECCcc
Confidence            2589999999874

>1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.64  E-value=0.0054  Score=53.46  Aligned_cols=75  Identities=19%  Similarity=0.304  Sum_probs=53.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC---cE---EEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA---DK---FVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~---~v~~~~~~~~~~~-------~  242 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++   +.   ..   ..|-.+.+.+.+.       .
T Consensus         5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   84 (280)
T 1xkq_A            5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   84 (280)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence            4678999987 99999999999889999999999988766543332   32   21   2355555444332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|++|++.|.
T Consensus        85 g~iD~lv~nAg~   96 (280)
T 1xkq_A           85 GKIDVLVNNAGA   96 (280)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCC
Confidence            579999999873

>4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes}

Probab=96.63  E-value=0.0066  Score=56.04  Aligned_cols=94  Identities=19%  Similarity=0.189  Sum_probs=67.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHhCC------Cc-EEEeCCCHHHHHHhcC--CccEEEE
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFG---LNVTVLSTSTSKKEEALSLLG------AD-KFVVSSDLEQMKALGK--SLDFIID  250 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g---~~V~~~~~~~~~~~~~~~~~g------~~-~~v~~~~~~~~~~~~~--~~dvvid  250 (344)
                      +|+|+|+|.+|..+++.+...|   .+|++++++.++.+.+.++++      .. ..+|..+.+.+.++..  ++|+|++
T Consensus         3 kVlIiGaGgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~~~DvVin   82 (405)
T 4ina_A            3 KVLQIGAGGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEVKPQIVLN   82 (405)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHHCCSEEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhhCCCEEEE
Confidence            6899999999999998888777   489999999998877655543      21 2345555555555443  4899999


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEEcC
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +++.......+..+++.+-.++++..
T Consensus        83 ~ag~~~~~~v~~a~l~~g~~vvD~a~  108 (405)
T 4ina_A           83 IALPYQDLTIMEACLRTGVPYLDTAN  108 (405)
T ss_dssp             CSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred             CCCcccChHHHHHHHHhCCCEEEecC
Confidence            99865445556667777777776533

>3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2

Probab=96.62  E-value=0.01  Score=50.55  Aligned_cols=75  Identities=21%  Similarity=0.231  Sum_probs=54.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .+...   ..|-.+.+.+++.       .+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i   83 (247)
T 3lyl_A            4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence            4678999998 9999999999888999999999998876555333   34332   2345555444332       2579


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        84 d~li~~Ag~   92 (247)
T 3lyl_A           84 DILVNNAGI   92 (247)
T ss_dssp             SEEEECCCC
T ss_pred             CEEEECCCC
Confidence            999999884

>2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens}

Probab=96.61  E-value=0.0062  Score=52.36  Aligned_cols=75  Identities=17%  Similarity=0.154  Sum_probs=53.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC----------C-cE--EEeCCCHHHHHHh----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG----------A-DK--FVVSSDLEQMKAL----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g----------~-~~--~v~~~~~~~~~~~----  241 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.+++.          . -.  ..|..+.+.+.+.    
T Consensus         6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~   85 (264)
T 2pd6_A            6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV   85 (264)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence            4678999998 999999999988899999999999887766544432          1 11  2344555444332    


Q ss_pred             ---cCCc-cEEEECCCC
Q 019199          242 ---GKSL-DFIIDTASG  254 (344)
Q Consensus       242 ---~~~~-dvvid~~g~  254 (344)
                         .+++ |++|++.|.
T Consensus        86 ~~~~g~i~d~vi~~Ag~  102 (264)
T 2pd6_A           86 QACFSRPPSVVVSCAGI  102 (264)
T ss_dssp             HHHHSSCCSEEEECCCC
T ss_pred             HHHhCCCCeEEEECCCc
Confidence               2456 999999874

>2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A

Probab=96.61  E-value=0.0033  Score=57.14  Aligned_cols=90  Identities=19%  Similarity=0.228  Sum_probs=66.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCe-EEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLN-VTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD--  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~-V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~--  255 (344)
                      -.|.+|.|+|.|.+|...++.++.+|++ |++.+++..+.+.+ +++|+..   ..+.+   ++....|+|+.++...  
T Consensus       162 l~g~tvgIIG~G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~-~~~g~~~---~~~l~---ell~~aDvV~l~~P~t~~  234 (364)
T 2j6i_A          162 IEGKTIATIGAGRIGYRVLERLVPFNPKELLYYDYQALPKDAE-EKVGARR---VENIE---ELVAQADIVTVNAPLHAG  234 (364)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGCCSEEEEECSSCCCHHHH-HHTTEEE---CSSHH---HHHHTCSEEEECCCCSTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHhCCCcEEEEECCCccchhHH-HhcCcEe---cCCHH---HHHhcCCEEEECCCCChH
Confidence            4688999999999999999999999997 99999877655555 5677432   12222   2234589999888753  


Q ss_pred             --hhH-HHHHHhcccCCEEEEEc
Q 019199          256 --HPF-DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       256 --~~~-~~~~~~l~~~G~iv~~g  275 (344)
                        ..+ ...+..+++++.+|.++
T Consensus       235 t~~li~~~~l~~mk~ga~lIn~a  257 (364)
T 2j6i_A          235 TKGLINKELLSKFKKGAWLVNTA  257 (364)
T ss_dssp             TTTCBCHHHHTTSCTTEEEEECS
T ss_pred             HHHHhCHHHHhhCCCCCEEEECC
Confidence              112 45678889998888776

>1iy9_A Spermidine synthase; rossmann fold, structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacillus subtilis} SCOP: c.66.1.17

Probab=96.60  E-value=0.011  Score=51.50  Aligned_cols=95  Identities=16%  Similarity=0.166  Sum_probs=66.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhC-----CC----cEEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLL-----GA----DKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~-----g~----~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..+.+||++|+|. |..+..+++..+ .+|++++-+++-.+.+++.+     +.    -.++..+..+.+....+.+|+|
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vEid~~~v~~ar~~~~~~~~~~~~~rv~v~~~D~~~~l~~~~~~fD~I  152 (275)
T 1iy9_A           74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI  152 (275)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred             CCCCEEEEECCch-HHHHHHHHhCCCCceEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCeeEE
Confidence            3568999999753 666777777666 49999999998887775544     21    2344444445555445679999


Q ss_pred             EECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199          249 IDTASG----------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       249 id~~g~----------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +-....          ...++.+.+.|+++|.++.-
T Consensus       153 i~d~~~~~~~~~~l~~~~~~~~~~~~L~pgG~lv~~  188 (275)
T 1iy9_A          153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (275)
T ss_dssp             EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             EECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            854332          24588999999999999876

>1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.59  E-value=0.0046  Score=54.47  Aligned_cols=75  Identities=20%  Similarity=0.299  Sum_probs=53.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC---cE---EEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA---DK---FVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~---~~---~v~~~~~~~~~~~-------~  242 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++++++.+.+.+++   |.   ..   ..|-.+.+.+.+.       .
T Consensus        25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~  104 (297)
T 1xhl_A           25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF  104 (297)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence            4678999988 99999999999889999999999988765543332   32   21   2355555444332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|++|++.|.
T Consensus       105 g~iD~lvnnAG~  116 (297)
T 1xhl_A          105 GKIDILVNNAGA  116 (297)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCCc
Confidence            579999998873

>3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua}

Probab=96.59  E-value=0.0056  Score=50.33  Aligned_cols=59  Identities=19%  Similarity=0.241  Sum_probs=44.3

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc---CCccEEEECCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG---KSLDFIIDTAS  253 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~---~~~dvvid~~g  253 (344)
                      ++||+|+ |++|.+.++.+. .|++|++++++.+           ....|..+.+.+.+..   +++|++|++.|
T Consensus         5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~~~~d~vi~~ag   67 (202)
T 3d7l_A            5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQVGKVDAIVSATG   67 (202)
T ss_dssp             EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHHCCEEEEEECCC
T ss_pred             EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHhCCCCEEEECCC
Confidence            6999998 999999999888 8999999998764           1234555555444332   46899999887

>2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli}

Probab=96.59  E-value=0.014  Score=49.78  Aligned_cols=70  Identities=20%  Similarity=0.217  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.+.     +..+... ..|..+.+.+.+.       .+++|++++
T Consensus         6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-----~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~   80 (250)
T 2fwm_X            6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ-----EQYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN   80 (250)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS-----SCCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh-----hcCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            4678999998 999999999999999999999988652     2334221 2355555544332       257999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        81 ~Ag~   84 (250)
T 2fwm_X           81 AAGI   84 (250)
T ss_dssp             CCCC
T ss_pred             CCCc
Confidence            9874

>4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli}

Probab=96.59  E-value=0.014  Score=52.82  Aligned_cols=107  Identities=18%  Similarity=0.301  Sum_probs=75.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-hh-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-HP-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-~~-  257 (344)
                      .|.+|.|+|.|.+|...++.++.+|.+|++.++.... +.+ ...|...    .+.   .++....|+|+-++... .+ 
T Consensus       175 ~gktvGIIGlG~IG~~vA~~l~~fG~~V~~~d~~~~~-~~~-~~~g~~~----~~l---~ell~~aDvV~l~~Plt~~T~  245 (365)
T 4hy3_A          175 AGSEIGIVGFGDLGKALRRVLSGFRARIRVFDPWLPR-SML-EENGVEP----ASL---EDVLTKSDFIFVVAAVTSENK  245 (365)
T ss_dssp             SSSEEEEECCSHHHHHHHHHHTTSCCEEEEECSSSCH-HHH-HHTTCEE----CCH---HHHHHSCSEEEECSCSSCC--
T ss_pred             CCCEEEEecCCcccHHHHHhhhhCCCEEEEECCCCCH-HHH-hhcCeee----CCH---HHHHhcCCEEEEcCcCCHHHH
Confidence            4889999999999999999999999999999987533 333 4567542    222   23335699999877632 11 


Q ss_pred             ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                         -...+..+++++.+|.++-..-.             +-+.+.+.+++|++.
T Consensus       246 ~li~~~~l~~mk~gailIN~aRG~~v-------------de~aL~~aL~~g~i~  286 (365)
T 4hy3_A          246 RFLGAEAFSSMRRGAAFILLSRADVV-------------DFDALMAAVSSGHIV  286 (365)
T ss_dssp             -CCCHHHHHTSCTTCEEEECSCGGGS-------------CHHHHHHHHHTTSSE
T ss_pred             hhcCHHHHhcCCCCcEEEECcCCchh-------------CHHHHHHHHHcCCce
Confidence               25778899999999988633111             235666777777663

>1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2

Probab=96.58  E-value=0.0067  Score=53.41  Aligned_cols=74  Identities=23%  Similarity=0.257  Sum_probs=53.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--------CCcE---EEeCCCHHHHHHh------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--------GADK---FVVSSDLEQMKAL------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~~~---~v~~~~~~~~~~~------  241 (344)
                      .+.++||+|+ |++|.+++..+...|++|++++++.++.+.+.+++        +...   ..|..+.+.+.+.      
T Consensus        17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~   96 (303)
T 1yxm_A           17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD   96 (303)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence            4688999998 99999999999889999999999987765543332        3222   1344555444332      


Q ss_pred             -cCCccEEEECCC
Q 019199          242 -GKSLDFIIDTAS  253 (344)
Q Consensus       242 -~~~~dvvid~~g  253 (344)
                       .+++|++|++.|
T Consensus        97 ~~g~id~li~~Ag  109 (303)
T 1yxm_A           97 TFGKINFLVNNGG  109 (303)
T ss_dssp             HHSCCCEEEECCC
T ss_pred             HcCCCCEEEECCC
Confidence             257999999988

>3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis}

Probab=96.58  E-value=0.0073  Score=52.44  Aligned_cols=74  Identities=23%  Similarity=0.286  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.+   ..+...   ..|..+.+.+.+.       .+++
T Consensus        33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i  112 (279)
T 3ctm_A           33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI  112 (279)
T ss_dssp             TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            4678999987 999999998888889999999988765543322   234322   2344555444332       2569


Q ss_pred             cEEEECCC
Q 019199          246 DFIIDTAS  253 (344)
Q Consensus       246 dvvid~~g  253 (344)
                      |++|++.|
T Consensus       113 d~li~~Ag  120 (279)
T 3ctm_A          113 DVFVANAG  120 (279)
T ss_dssp             SEEEECGG
T ss_pred             CEEEECCc
Confidence            99999876

>3fbt_A Chorismate mutase and shikimate 5-dehydrogenase fusion protein; structural genomics, oxidoreductase, amino-acid biosynthesis; 2.10A {Clostridium acetobutylicum}

Probab=96.57  E-value=0.0072  Score=52.73  Aligned_cols=100  Identities=13%  Similarity=0.142  Sum_probs=66.1

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      ..+|...+.--.+.+++|+|+|+.|.+++..+...|+ +|+++.++.++.+.+.+.+.   .+..   +.+.++  ++|+
T Consensus       110 ~~~L~~~~~~~~~k~vlvlGaGGaaraia~~L~~~G~~~v~v~nRt~~ka~~La~~~~---~~~~---~~l~~l--~~Di  181 (282)
T 3fbt_A          110 GKMLSKFRVEIKNNICVVLGSGGAARAVLQYLKDNFAKDIYVVTRNPEKTSEIYGEFK---VISY---DELSNL--KGDV  181 (282)
T ss_dssp             HHHHHHTTCCCTTSEEEEECSSTTHHHHHHHHHHTTCSEEEEEESCHHHHHHHCTTSE---EEEH---HHHTTC--CCSE
T ss_pred             HHHHHHcCCCccCCEEEEECCcHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHhcC---cccH---HHHHhc--cCCE
Confidence            3445443432468899999999999999999999999 99999999988766644442   2222   222232  7999


Q ss_pred             EEECCCCch--h---HHHHHHhcccCCEEEEEcC
Q 019199          248 IIDTASGDH--P---FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       248 vid~~g~~~--~---~~~~~~~l~~~G~iv~~g~  276 (344)
                      +|++++...  .   ..--...++++..++++-.
T Consensus       182 vInaTp~Gm~~~~~~~pi~~~~l~~~~~v~DlvY  215 (282)
T 3fbt_A          182 IINCTPKGMYPKEGESPVDKEVVAKFSSAVDLIY  215 (282)
T ss_dssp             EEECSSTTSTTSTTCCSSCHHHHTTCSEEEESCC
T ss_pred             EEECCccCccCCCccCCCCHHHcCCCCEEEEEee
Confidence            999985321  0   1112345677776666643

>1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A*

Probab=96.57  E-value=0.0084  Score=52.71  Aligned_cols=74  Identities=16%  Similarity=0.209  Sum_probs=53.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.+..+...|++|++++++.++.+.+.+++    +...   ..|-.+.+.+.+.       .++
T Consensus        25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~  104 (302)
T 1w6u_A           25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH  104 (302)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 99999999999889999999999987765543332    4322   2344555443332       257


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|++|++.|
T Consensus       105 id~li~~Ag  113 (302)
T 1w6u_A          105 PNIVINNAA  113 (302)
T ss_dssp             CSEEEECCC
T ss_pred             CCEEEECCC
Confidence            899999988

>2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens}

Probab=96.56  E-value=0.0011  Score=54.30  Aligned_cols=94  Identities=16%  Similarity=0.170  Sum_probs=61.8

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCC----------CeEEEEeCCchhHHHHHHhCCCcEEE-e--CCCHHHHH--
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFG----------LNVTVLSTSTSKKEEALSLLGADKFV-V--SSDLEQMK--  239 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g----------~~V~~~~~~~~~~~~~~~~~g~~~~v-~--~~~~~~~~--  239 (344)
                      ...++++++||.+|+|+ |..+..+++..+          .+|++++.++...      ......+ .  ..+.....  
T Consensus        17 ~~~~~~~~~vLDlGcG~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~~------~~~~~~~~~~d~~~~~~~~~~   89 (196)
T 2nyu_A           17 HQILRPGLRVLDCGAAP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIFP------LEGATFLCPADVTDPRTSQRI   89 (196)
T ss_dssp             HCCCCTTCEEEEETCCS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCCC------CTTCEEECSCCTTSHHHHHHH
T ss_pred             cCCCCCCCEEEEeCCCC-CHHHHHHHHHhccccccccCCCceEEEEechhccc------CCCCeEEEeccCCCHHHHHHH
Confidence            34458899999999987 889999999876          6899999887431      1111222 1  12222111  


Q ss_pred             -H-h-cCCccEEEE-----CCCCc------------hhHHHHHHhcccCCEEEEEc
Q 019199          240 -A-L-GKSLDFIID-----TASGD------------HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       240 -~-~-~~~~dvvid-----~~g~~------------~~~~~~~~~l~~~G~iv~~g  275 (344)
                       . . ...+|+|+.     +++..            ..+..+.+.|+|+|+++...
T Consensus        90 ~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~  145 (196)
T 2nyu_A           90 LEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT  145 (196)
T ss_dssp             HHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             HHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence             1 1 247999994     33332            34677889999999998764

>2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A

Probab=96.56  E-value=0.0055  Score=56.08  Aligned_cols=90  Identities=11%  Similarity=0.106  Sum_probs=64.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-h-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-H-  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-~-  256 (344)
                      -.|.++.|+|.|.+|...++.++.+|.+|++.+++.++.+.+ +++|+...   .+.   .++....|+|+.++... . 
T Consensus       189 l~gktvGIIGlG~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~-~~~G~~~~---~~l---~ell~~aDvV~l~~Plt~~t  261 (393)
T 2nac_A          189 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KELNLTWH---ATR---EDMYPVCDVVTLNCPLHPET  261 (393)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHHTCEEC---SSH---HHHGGGCSEEEECSCCCTTT
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHhCCCEEEEEcCCccchhhH-hhcCceec---CCH---HHHHhcCCEEEEecCCchHH
Confidence            368899999999999999999999999999999876555444 45675421   122   23345688888877632 1 


Q ss_pred             --hH-HHHHHhcccCCEEEEEc
Q 019199          257 --PF-DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       257 --~~-~~~~~~l~~~G~iv~~g  275 (344)
                        .+ ...+..|+++..+|.++
T Consensus       262 ~~li~~~~l~~mk~gailIN~a  283 (393)
T 2nac_A          262 EHMINDETLKLFKRGAYIVNTA  283 (393)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECS
T ss_pred             HHHhhHHHHhhCCCCCEEEECC
Confidence              12 46677888888888776

>1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ...

Probab=96.56  E-value=0.008  Score=52.50  Aligned_cols=74  Identities=24%  Similarity=0.290  Sum_probs=52.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE----EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK----FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~----~v~~~~~~~~~~~-------~~~  244 (344)
                      .|.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.++   .|...    ..|-.+.+.+.+.       .++
T Consensus        27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~  106 (286)
T 1xu9_A           27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG  106 (286)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence            4678999998 9999999999988999999999998876654332   24311    2344555443332       258


Q ss_pred             ccEEEEC-CC
Q 019199          245 LDFIIDT-AS  253 (344)
Q Consensus       245 ~dvvid~-~g  253 (344)
                      +|++|++ .|
T Consensus       107 iD~li~naag  116 (286)
T 1xu9_A          107 LDMLILNHIT  116 (286)
T ss_dssp             CSEEEECCCC
T ss_pred             CCEEEECCcc
Confidence            9999988 44

>2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A

Probab=96.55  E-value=0.013  Score=49.71  Aligned_cols=71  Identities=20%  Similarity=0.146  Sum_probs=49.2

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCC--HH-HHHH---hcCCccEEEECC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSD--LE-QMKA---LGKSLDFIIDTA  252 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~--~~-~~~~---~~~~~dvvid~~  252 (344)
                      +.++||+|+ |++|.+.++.+...|++|+++++++++..   +++|... ..|..+  .. ..++   ..+++|+++++.
T Consensus         2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~D~~~~~~~~~~~~~~~~~g~id~lv~~A   78 (239)
T 2ekp_A            2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEEAA---QSLGAVPLPTDLEKDDPKGLVKRALEALGGLHVLVHAA   78 (239)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHH---HHHTCEEEECCTTTSCHHHHHHHHHHHHTSCCEEEECC
T ss_pred             CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHH---HhhCcEEEecCCchHHHHHHHHHHHHHcCCCCEEEECC
Confidence            568999998 99999999999999999999999887632   3445322 123333  11 1121   126799999988


Q ss_pred             CC
Q 019199          253 SG  254 (344)
Q Consensus       253 g~  254 (344)
                      |.
T Consensus        79 g~   80 (239)
T 2ekp_A           79 AV   80 (239)
T ss_dssp             CC
T ss_pred             CC
Confidence            73

>3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A*

Probab=96.55  E-value=0.009  Score=49.49  Aligned_cols=98  Identities=16%  Similarity=0.085  Sum_probs=66.4

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-CcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      ..+.++.+||-+|+|. |..+..+++. |++|++++.+++.++.++ +.+ ....+...+.... ...+.+|+|+....-
T Consensus        42 ~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~~~~~~d~~~~-~~~~~~D~v~~~~~l  117 (218)
T 3ou2_A           42 RAGNIRGDVLELASGT-GYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNVEFRQQDLFDW-TPDRQWDAVFFAHWL  117 (218)
T ss_dssp             TTTTSCSEEEEESCTT-SHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTEEEEECCTTSC-CCSSCEEEEEEESCG
T ss_pred             hcCCCCCeEEEECCCC-CHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCeEEEecccccC-CCCCceeEEEEechh
Confidence            3357888999999864 7777777777 889999999999888884 455 2222222221111 123679999864431


Q ss_pred             --------chhHHHHHHhcccCCEEEEEcCC
Q 019199          255 --------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       255 --------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                              ...+..+.+.|+|+|+++.....
T Consensus       118 ~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~~  148 (218)
T 3ou2_A          118 AHVPDDRFEAFWESVRSAVAPGGVVEFVDVT  148 (218)
T ss_dssp             GGSCHHHHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             hcCCHHHHHHHHHHHHHHcCCCeEEEEEeCC
Confidence                    23477888899999999887543

>2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa}

Probab=96.54  E-value=0.015  Score=51.01  Aligned_cols=92  Identities=21%  Similarity=0.129  Sum_probs=63.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-------hhHHHHH--HhCCCcE-EEeCCCHHHHHHhcCCccEEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-------SKKEEAL--SLLGADK-FVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-------~~~~~~~--~~~g~~~-~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      +.+|||+|+ |.+|..++..+...|.+|++++++.       ++.+.+.  +..|... ..|..+.+.+.+.-.++|+||
T Consensus         2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~~~d~vi   81 (307)
T 2gas_A            2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDHETLVKAIKQVDIVI   81 (307)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEE
T ss_pred             CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCHHHHHHHHhCCCEEE
Confidence            356999998 9999999998888899999999886       4443321  2345432 235566777766667899999


Q ss_pred             ECCCCc--hhHHHHHHhcccC---CEEE
Q 019199          250 DTASGD--HPFDAYMSLLKVA---GVYV  272 (344)
Q Consensus       250 d~~g~~--~~~~~~~~~l~~~---G~iv  272 (344)
                      .+.+..  .....+++.++..   .+++
T Consensus        82 ~~a~~~~~~~~~~l~~aa~~~g~v~~~v  109 (307)
T 2gas_A           82 CAAGRLLIEDQVKIIKAIKEAGNVKKFF  109 (307)
T ss_dssp             ECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred             ECCcccccccHHHHHHHHHhcCCceEEe
Confidence            998853  2245555655443   4776

>3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum}

Probab=96.54  E-value=0.022  Score=48.38  Aligned_cols=72  Identities=19%  Similarity=0.098  Sum_probs=46.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHH--Hh-------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMK--AL-------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~--~~-------~~~~dvvi  249 (344)
                      .+.++||+|+ |++|.+.++.+.. |++|+++++++++.+.+. +......+. -+.....  +.       -+++|+++
T Consensus         4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~-~D~~~~~~~~~~~~~~~~~~~id~lv   80 (245)
T 3e9n_A            4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIE-SDIVKEVLEEGGVDKLKNLDHVDTLV   80 (245)
T ss_dssp             --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEE-CCHHHHHHTSSSCGGGTTCSCCSEEE
T ss_pred             CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCccee-cccchHHHHHHHHHHHHhcCCCCEEE
Confidence            4678999998 9999998887755 889999999988887774 333222222 2221111  10       14799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        81 ~~Ag~   85 (245)
T 3e9n_A           81 HAAAV   85 (245)
T ss_dssp             ECC--
T ss_pred             ECCCc
Confidence            99884

>1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A

Probab=96.54  E-value=0.0063  Score=54.29  Aligned_cols=99  Identities=15%  Similarity=-0.018  Sum_probs=65.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CC--CcEE--EeCCCHHHHHHhcCCccEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LG--ADKF--VVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g--~~~~--v~~~~~~~~~~~~~~~dvvi  249 (344)
                      -.+.+|||+|+ |.+|..++..+...|.+|++++++.++.+.+.+.    .+  ...+  .|..+.+.+.+...++|+||
T Consensus         9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~d~vi   88 (342)
T 1y1p_A            9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAAGVA   88 (342)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCSEEE
T ss_pred             CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcChHHHHHHHcCCCEEE
Confidence            45788999998 9999999998888899999999987765544222    12  2222  24444444444446899999


Q ss_pred             ECCCCch--------------hHHHHHHhccc---CCEEEEEcCC
Q 019199          250 DTASGDH--------------PFDAYMSLLKV---AGVYVLVGFP  277 (344)
Q Consensus       250 d~~g~~~--------------~~~~~~~~l~~---~G~iv~~g~~  277 (344)
                      .+.+...              ....+++.+.+   .+++|.++..
T Consensus        89 h~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~  133 (342)
T 1y1p_A           89 HIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSST  133 (342)
T ss_dssp             ECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCG
T ss_pred             EeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccH
Confidence            9887421              12234444432   3789988754

>3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A*

Probab=96.54  E-value=0.011  Score=51.70  Aligned_cols=76  Identities=21%  Similarity=0.128  Sum_probs=52.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC----------------chhHHHHHH---hCCCcE---EEeCCCH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS----------------TSKKEEALS---LLGADK---FVVSSDL  235 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~----------------~~~~~~~~~---~~g~~~---~v~~~~~  235 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|++++++                .++++.+.+   ..+...   ..|-.+.
T Consensus         9 l~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~   88 (286)
T 3uve_A            9 VEGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDY   88 (286)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCH
T ss_pred             cCCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCH
Confidence            35789999998 999999999999999999999876                444443322   234322   2355555


Q ss_pred             HHHHHh-------cCCccEEEECCCC
Q 019199          236 EQMKAL-------GKSLDFIIDTASG  254 (344)
Q Consensus       236 ~~~~~~-------~~~~dvvid~~g~  254 (344)
                      +.+.+.       .+++|+++++.|.
T Consensus        89 ~~v~~~~~~~~~~~g~id~lv~nAg~  114 (286)
T 3uve_A           89 DALKAAVDSGVEQLGRLDIIVANAGI  114 (286)
T ss_dssp             HHHHHHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHHHHHhCCCCEEEECCcc
Confidence            544332       2579999999884

>3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides}

Probab=96.54  E-value=0.0051  Score=53.26  Aligned_cols=71  Identities=24%  Similarity=0.207  Sum_probs=49.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|++++++.++.... ...    ..|-.+.+.+.+.       .+++|++++
T Consensus        26 l~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~-~~~----~~Dv~~~~~~~~~~~~~~~~~g~iD~lvn  100 (266)
T 3uxy_A           26 FEGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAAD-LHL----PGDLREAAYADGLPGAVAAGLGRLDIVVN  100 (266)
T ss_dssp             CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCS-EEC----CCCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhh-hcc----CcCCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence            35688999988 9999999999988999999999886644322 111    1234444433221       267999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus       101 nAg~  104 (266)
T 3uxy_A          101 NAGV  104 (266)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9884

>1p77_A Shikimate 5-dehydrogenase; NADPH, oxidoreductase; HET: ATR; 1.95A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5 PDB: 1p74_A*

Probab=96.53  E-value=0.0025  Score=55.51  Aligned_cols=99  Identities=15%  Similarity=0.229  Sum_probs=63.7

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c-EEEeCCCHHHHHHhc-CCcc
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D-KFVVSSDLEQMKALG-KSLD  246 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~~v~~~~~~~~~~~~-~~~d  246 (344)
                      +|...+.--.+.+++|+|+|++|.+++..+...|++|+++.++.++.+.+.++++.  . ...+.      .++. +++|
T Consensus       109 ~L~~~~~~~~~~~vlvlGaGg~g~a~a~~L~~~G~~v~v~~R~~~~a~~l~~~~~~~~~~~~~~~------~~~~~~~~D  182 (272)
T 1p77_A          109 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSM------DSIPLQTYD  182 (272)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEG------GGCCCSCCS
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHccccCCeEEeeH------HHhccCCCC
Confidence            34443322467899999999999999998888999999999999887777555542  1 12221      1222 3799


Q ss_pred             EEEECCCCchhHHHH----HHhcccCCEEEEEcC
Q 019199          247 FIIDTASGDHPFDAY----MSLLKVAGVYVLVGF  276 (344)
Q Consensus       247 vvid~~g~~~~~~~~----~~~l~~~G~iv~~g~  276 (344)
                      +++++++... ....    ...++++..++++..
T Consensus       183 ivIn~t~~~~-~~~~~~i~~~~l~~~~~v~D~~y  215 (272)
T 1p77_A          183 LVINATSAGL-SGGTASVDAEILKLGSAFYDMQY  215 (272)
T ss_dssp             EEEECCCC--------CCCHHHHHHCSCEEESCC
T ss_pred             EEEECCCCCC-CCCCCCCCHHHcCCCCEEEEeeC
Confidence            9999998654 2111    123455666666644

>1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.52  E-value=0.0029  Score=53.64  Aligned_cols=91  Identities=22%  Similarity=0.196  Sum_probs=59.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE--EeCCCHHHHHHh-------c--CCccEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKAL-------G--KSLDFI  248 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~--~~~dvv  248 (344)
                      +.++||+|+ |++|.+.++.+...|++|+++++++++..      +....  .|..+.+.+.+.       -  +++|++
T Consensus         3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l   76 (236)
T 1ooe_A            3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   76 (236)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence            567899998 99999999999999999999998876532      11111  122333332221       1  579999


Q ss_pred             EECCCCc--------hh------------------HHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTASGD--------HP------------------FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~~--------~~------------------~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++.|..        ..                  .+.++..++.+|+++.++..
T Consensus        77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~  131 (236)
T 1ooe_A           77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  131 (236)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECch
Confidence            9998831        10                  23344455567899998755

>1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1

Probab=96.52  E-value=0.0077  Score=53.59  Aligned_cols=100  Identities=22%  Similarity=0.104  Sum_probs=67.1

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCCc-EEEeCCCHHHHHHhcCCccEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGAD-KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~~-~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ...++++++||.+|+|. |..+..+++..+  .+|++++.+++..+.+++.   .|.. ..+...+........+.+|+|
T Consensus        70 ~l~~~~~~~VLDiGcG~-G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~v~~~~~d~~~~~~~~~~fD~I  148 (317)
T 1dl5_A           70 WVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDVI  148 (317)
T ss_dssp             HTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEE
T ss_pred             hcCCCCcCEEEEecCCc-hHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCCeEEEECChhhccccCCCeEEE
Confidence            33458999999999876 778888887653  4699999999887766443   2422 212122211100113579999


Q ss_pred             EECCCCchhHHHHHHhcccCCEEEEEc
Q 019199          249 IDTASGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 id~~g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +...........+.+.|+|+|+++..-
T Consensus       149 v~~~~~~~~~~~~~~~LkpgG~lvi~~  175 (317)
T 1dl5_A          149 FVTVGVDEVPETWFTQLKEGGRVIVPI  175 (317)
T ss_dssp             EECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred             EEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence            987665554578889999999998763

>2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens}

Probab=96.51  E-value=0.014  Score=50.16  Aligned_cols=74  Identities=18%  Similarity=0.164  Sum_probs=52.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHH----h----cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKA----L----GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~----~----~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+.+++   |...   ..|-.+.+.+.+    .    .++
T Consensus         4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   83 (260)
T 2qq5_A            4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR   83 (260)
T ss_dssp             TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence            4678999987 99999999999889999999999988765553333   4321   234455543322    1    357


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|+++++.|
T Consensus        84 id~lvnnAg   92 (260)
T 2qq5_A           84 LDVLVNNAY   92 (260)
T ss_dssp             CCEEEECCC
T ss_pred             ceEEEECCc
Confidence            899999984

>1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP}

Probab=96.49  E-value=0.0056  Score=52.15  Aligned_cols=73  Identities=18%  Similarity=0.059  Sum_probs=52.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-e--CCchhHHHHHHhC-CCcEEEeCCCHH-HHHHh---cCCccEEEEC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-S--TSTSKKEEALSLL-GADKFVVSSDLE-QMKAL---GKSLDFIIDT  251 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~--~~~~~~~~~~~~~-g~~~~v~~~~~~-~~~~~---~~~~dvvid~  251 (344)
                      |.++||+|+ |++|.+.++.+...|++|+++ +  +++++.+.+.+++ +.+ +.+..+.+ ..++.   .+++|+++++
T Consensus         1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~~-~~~~~~v~~~~~~~~~~~g~iD~lv~~   79 (244)
T 1zmo_A            1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGTI-ALAEQKPERLVDATLQHGEAIDTIVSN   79 (244)
T ss_dssp             -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTEE-ECCCCCGGGHHHHHGGGSSCEEEEEEC
T ss_pred             CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCCc-ccCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            467899987 999999999999999999999 6  8888777665565 432 33444332 22322   2579999999


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        80 Ag~   82 (244)
T 1zmo_A           80 DYI   82 (244)
T ss_dssp             CCC
T ss_pred             CCc
Confidence            873

>1vl6_A Malate oxidoreductase; TM0542, NAD-dependent malic enzyme, structural genomics, JCS protein structure initiative, PSI; 2.61A {Thermotoga maritima} SCOP: c.2.1.7 c.58.1.3 PDB: 2hae_A*

Probab=96.49  E-value=0.0046  Score=56.00  Aligned_cols=111  Identities=14%  Similarity=0.139  Sum_probs=70.2

Q ss_pred             hhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC----chh----HHHHHHhCCCcEEEe-CC
Q 019199          164 AGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS----TSK----KEEALSLLGADKFVV-SS  233 (344)
Q Consensus       164 ~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~----~~~----~~~~~~~~g~~~~v~-~~  233 (344)
                      ....-+.+++..+.--++.+|+|+|+|..|..+++++..+|+ +|+++++.    .+|    ++...+.+...  .+ ..
T Consensus       175 ~lAal~~A~~i~g~~l~~~kVVv~GAGaAG~~iAkll~~~G~~~I~v~Dr~Gli~~~R~~~~L~~~k~~~A~~--~~~~~  252 (388)
T 1vl6_A          175 VSAAFLNALKLTEKKIEEVKVVVNGIGAAGYNIVKFLLDLGVKNVVAVDRKGILNENDPETCLNEYHLEIARI--TNPER  252 (388)
T ss_dssp             HHHHHHHHHHHHTCCTTTCEEEEECCSHHHHHHHHHHHHHTCCEEEEEETTEECCTTSGGGCSSHHHHHHHHT--SCTTC
T ss_pred             HHHHHHHHHHHhCCCCCCcEEEEECCCHHHHHHHHHHHhCCCCeEEEEECCCcccCCCcccccCHHHHHHHHh--hhccC
Confidence            333344455545532467899999999999999999999999 89999988    554    22222222211  01 11


Q ss_pred             CHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcC
Q 019199          234 DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       234 ~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      ....+.+...++|++|-+++....-++.++.|+++..++.+..
T Consensus       253 ~~~~L~eav~~ADVlIG~Sap~l~t~emVk~Ma~~pIIfalSN  295 (388)
T 1vl6_A          253 LSGDLETALEGADFFIGVSRGNILKPEWIKKMSRKPVIFALAN  295 (388)
T ss_dssp             CCSCHHHHHTTCSEEEECSCSSCSCHHHHTTSCSSCEEEECCS
T ss_pred             chhhHHHHHccCCEEEEeCCCCccCHHHHHhcCCCCEEEEcCC
Confidence            1223444446689999888743335677788887766655543

>3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum}

Probab=96.47  E-value=0.0056  Score=55.27  Aligned_cols=88  Identities=27%  Similarity=0.401  Sum_probs=64.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-h--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-H--  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-~--  256 (344)
                      .|.+|.|+|.|.+|...++.++.+|.+|++.+++.. .+.+ ...|...+   .+.+   ++....|+|+-++... .  
T Consensus       159 ~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~d~~~~-~~~~-~~~g~~~~---~~l~---ell~~aDiV~l~~Plt~~t~  230 (352)
T 3gg9_A          159 KGQTLGIFGYGKIGQLVAGYGRAFGMNVLVWGRENS-KERA-RADGFAVA---ESKD---ALFEQSDVLSVHLRLNDETR  230 (352)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSHHH-HHHH-HHTTCEEC---SSHH---HHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHhCCCEEEEECCCCC-HHHH-HhcCceEe---CCHH---HHHhhCCEEEEeccCcHHHH
Confidence            588999999999999999999999999999997753 3333 46676421   1222   2223489999877632 1  


Q ss_pred             --hHHHHHHhcccCCEEEEEc
Q 019199          257 --PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       257 --~~~~~~~~l~~~G~iv~~g  275 (344)
                        .-...++.++++..+|.++
T Consensus       231 ~li~~~~l~~mk~gailIN~a  251 (352)
T 3gg9_A          231 SIITVADLTRMKPTALFVNTS  251 (352)
T ss_dssp             TCBCHHHHTTSCTTCEEEECS
T ss_pred             HhhCHHHHhhCCCCcEEEECC
Confidence              1246788899999999887

>3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.46  E-value=0.0094  Score=51.03  Aligned_cols=76  Identities=20%  Similarity=0.186  Sum_probs=49.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      .++.++||+|+ |++|.+.+..+...|++|++++ ++.++.....   +..+...   ..|-.+.+.+.+.       .+
T Consensus        11 ~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g   90 (256)
T 3ezl_A           11 MSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEVG   90 (256)
T ss_dssp             --CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhcC
Confidence            56788999987 9999999999888999999887 4444433221   2344321   2344555443332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        91 ~id~lv~~Ag~  101 (256)
T 3ezl_A           91 EIDVLVNNAGI  101 (256)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999999874

>3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti}

Probab=96.46  E-value=0.02  Score=49.92  Aligned_cols=75  Identities=11%  Similarity=0.128  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhC----CCcEE---EeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLL----GADKF---VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~----g~~~~---v~~~~~~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++ +.++.+.+.+++    +....   .|-.+.+.+.+.       .+
T Consensus        24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  103 (281)
T 3v2h_A           24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRFG  103 (281)
T ss_dssp             TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHCC
Confidence            4678999998 99999999999999999999998 444444432222    33222   244555444332       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus       104 ~iD~lv~nAg~  114 (281)
T 3v2h_A          104 GADILVNNAGV  114 (281)
T ss_dssp             SCSEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999884

>3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0

Probab=96.45  E-value=0.011  Score=52.76  Aligned_cols=75  Identities=21%  Similarity=0.189  Sum_probs=52.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCC-cEE--EeCCCHHHHHHhc--CCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGA-DKF--VVSSDLEQMKALG--KSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~-~~~--v~~~~~~~~~~~~--~~~dvvi  249 (344)
                      .+.+|||+|+ |.+|..+++.+...|++|++++++.++.....+.    .+. ...  .|..+.+.+.+..  .++|++|
T Consensus         4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~vi   83 (341)
T 3enk_A            4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDAHPITAAI   83 (341)
T ss_dssp             SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHHSCCCEEE
T ss_pred             CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhccCCcEEE
Confidence            4568999998 9999999999999999999999876543222111    232 122  2445566555543  3799999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.+.
T Consensus        84 h~A~~   88 (341)
T 3enk_A           84 HFAAL   88 (341)
T ss_dssp             ECCCC
T ss_pred             ECccc
Confidence            99875

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.43  E-value=0.013  Score=56.99  Aligned_cols=75  Identities=17%  Similarity=0.137  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHH---HhCCCcEEEeCCCHH----HHHHh-
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST---------SKKEEAL---SLLGADKFVVSSDLE----QMKAL-  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~---------~~~~~~~---~~~g~~~~v~~~~~~----~~~~~-  241 (344)
                      .|.++||+|+ +++|.+.+..+...|++|++.+++.         ++.+.+.   +..|...+.|..+.+    ..++. 
T Consensus         7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~   86 (604)
T 2et6_A            7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV   86 (604)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence            4678899998 8999999999999999999987654         3333322   234544555655542    22222 


Q ss_pred             --cCCccEEEECCCC
Q 019199          242 --GKSLDFIIDTASG  254 (344)
Q Consensus       242 --~~~~dvvid~~g~  254 (344)
                        -+++|+++++.|.
T Consensus        87 ~~~G~iDiLVnNAGi  101 (604)
T 2et6_A           87 KNFGTVHVIINNAGI  101 (604)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence              2679999999884

>2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum}

Probab=96.42  E-value=0.013  Score=49.80  Aligned_cols=75  Identities=19%  Similarity=0.209  Sum_probs=50.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++ .+++++.+.+.+   ..+...   ..|..+.+.+.+.       .++
T Consensus         4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~   83 (247)
T 2hq1_A            4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR   83 (247)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 999999999998899999998 556555443322   234332   2344555544332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        84 ~d~vi~~Ag~   93 (247)
T 2hq1_A           84 IDILVNNAGI   93 (247)
T ss_dssp             CCEEEECC--
T ss_pred             CCEEEECCCC
Confidence            9999998874

>3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A*

Probab=96.42  E-value=0.0081  Score=53.20  Aligned_cols=99  Identities=19%  Similarity=0.147  Sum_probs=66.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCccEEEECC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      ++++++||-+|+|. |..+..+++..|++|++++.+++..+.+++.   .|..  ..+...+...+....+.+|+|+..-
T Consensus       115 ~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~fD~V~~~~  193 (312)
T 3vc1_A          115 AGPDDTLVDAGCGR-GGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVCNMLDTPFDKGAVTASWNNE  193 (312)
T ss_dssp             CCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCEEEEEEES
T ss_pred             CCCCCEEEEecCCC-CHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEECChhcCCCCCCCEeEEEECC
Confidence            58899999999864 7778888887789999999998877666432   3321  2121122111111125799997632


Q ss_pred             -----CCchhHHHHHHhcccCCEEEEEcCC
Q 019199          253 -----SGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       253 -----g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                           +-...+..+.+.|+|+|+++.....
T Consensus       194 ~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~  223 (312)
T 3vc1_A          194 STMYVDLHDLFSEHSRFLKVGGRYVTITGC  223 (312)
T ss_dssp             CGGGSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             chhhCCHHHHHHHHHHHcCCCcEEEEEEcc
Confidence                 2234588889999999999987643

>3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A*

Probab=96.42  E-value=0.03  Score=46.65  Aligned_cols=98  Identities=18%  Similarity=0.175  Sum_probs=66.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCC---cEEEeCCCHHHHHHhc----CCcc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGA---DKFVVSSDLEQMKALG----KSLD  246 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~---~~~v~~~~~~~~~~~~----~~~d  246 (344)
                      .++.+||-+|+| .|..++.+++..  +.+|+.++.+++..+.+++.   .|.   -.++..+..+.+....    +.||
T Consensus        57 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~fD  135 (223)
T 3duw_A           57 QGARNILEIGTL-GGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTGLALDSLQQIENEKYEPFD  135 (223)
T ss_dssp             HTCSEEEEECCT-TSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCCCCS
T ss_pred             hCCCEEEEecCC-ccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCcC
Confidence            577899999986 478888889887  57999999998877666433   343   1233333333333321    5699


Q ss_pred             EEEECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+-....   ...+..+.+.|+|+|.++.-...
T Consensus       136 ~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~~  169 (223)
T 3duw_A          136 FIFIDADKQNNPAYFEWALKLSRPGTVIIGDNVV  169 (223)
T ss_dssp             EEEECSCGGGHHHHHHHHHHTCCTTCEEEEESCS
T ss_pred             EEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            99854432   23477888999999988876544

>4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A*

Probab=96.42  E-value=0.008  Score=52.10  Aligned_cols=76  Identities=22%  Similarity=0.214  Sum_probs=52.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.+.++||+|+ |++|.+.++.+...|++|+++++ +.++.+.+.   +..+...   ..|-.+.+.+.+.       .+
T Consensus        26 l~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g  105 (269)
T 4dmm_A           26 LTDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWG  105 (269)
T ss_dssp             TTTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence            35788999987 99999999999889999999888 444443332   2334332   2355555544332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus       106 ~id~lv~nAg~  116 (269)
T 4dmm_A          106 RLDVLVNNAGI  116 (269)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            89999999874

>1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A*

Probab=96.41  E-value=0.028  Score=50.64  Aligned_cols=96  Identities=18%  Similarity=0.190  Sum_probs=64.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhH--HHHHHhC-CCcE-EEe-CCCHHHHHHhcCCccEEEECCCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKK--EEALSLL-GADK-FVV-SSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~--~~~~~~~-g~~~-~v~-~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      +.+|||+|+ |.+|..+++.+...|.+|++++++.++.  ..+ ... +... ..| ..+.+.+.+.-.++|+||.+.+.
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l-~~~~~v~~v~~D~l~d~~~l~~~~~~~d~Vi~~a~~   83 (352)
T 1xgk_A            5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINTTS   83 (352)
T ss_dssp             CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECCCS
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHH-hhcCCcEEEECCccCCHHHHHHHHhcCCEEEEcCCC
Confidence            457999998 9999999988888899999999887754  233 222 3222 224 45666666666789999977654


Q ss_pred             c-----hhHHHHHHhcccC---CEEEEEcCC
Q 019199          255 D-----HPFDAYMSLLKVA---GVYVLVGFP  277 (344)
Q Consensus       255 ~-----~~~~~~~~~l~~~---G~iv~~g~~  277 (344)
                      .     .....+++.++..   +++|.++..
T Consensus        84 ~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~  114 (352)
T 1xgk_A           84 QAGDEIAIGKDLADAAKRAGTIQHYIYSSMP  114 (352)
T ss_dssp             TTSCHHHHHHHHHHHHHHHSCCSEEEEEECC
T ss_pred             CCcHHHHHHHHHHHHHHHcCCccEEEEeCCc
Confidence            2     1124455544433   589888654

>1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2

Probab=96.41  E-value=0.02  Score=50.40  Aligned_cols=92  Identities=22%  Similarity=0.243  Sum_probs=62.9

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-----hhHHHHH--HhCCCcE-EEeCCCHHHHHHhcCCccEEEECC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-----SKKEEAL--SLLGADK-FVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-----~~~~~~~--~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .+|||+|+ |.+|..++..+...|.+|++++++.     ++.+.+.  +..+... ..|..+.+.+.+.-.++|+||.++
T Consensus         5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a   84 (313)
T 1qyd_A            5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISAL   84 (313)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEECC
T ss_pred             CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCHHHHHHHHhCCCEEEECC
Confidence            56999998 9999999999988899999999884     3333321  1234432 235566677766667899999988


Q ss_pred             CCc------hhHHHHHHhcccCC---EEEE
Q 019199          253 SGD------HPFDAYMSLLKVAG---VYVL  273 (344)
Q Consensus       253 g~~------~~~~~~~~~l~~~G---~iv~  273 (344)
                      +..      .....+++.++..|   +++.
T Consensus        85 ~~~~~~~~~~~~~~l~~aa~~~g~v~~~v~  114 (313)
T 1qyd_A           85 AGGVLSHHILEQLKLVEAIKEAGNIKRFLP  114 (313)
T ss_dssp             CCSSSSTTTTTHHHHHHHHHHSCCCSEEEC
T ss_pred             ccccchhhHHHHHHHHHHHHhcCCCceEEe
Confidence            743      22455666665444   7763

>2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A*

Probab=96.41  E-value=0.0098  Score=53.35  Aligned_cols=88  Identities=25%  Similarity=0.420  Sum_probs=64.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++ +.+ +++|...    .+.+   +...+.|+|+.++....  
T Consensus       148 l~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~~----~~l~---~~l~~aDvVil~vp~~~~t  218 (334)
T 2dbq_A          148 VYGKTIGIIGLGRIGQAIAKRAKGFNMRILYYSRTRKE-EVE-RELNAEF----KPLE---DLLRESDFVVLAVPLTRET  218 (334)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCH-HHH-HHHCCEE----CCHH---HHHHHCSEEEECCCCCTTT
T ss_pred             CCCCEEEEEccCHHHHHHHHHHHhCCCEEEEECCCcch-hhH-hhcCccc----CCHH---HHHhhCCEEEECCCCChHH
Confidence            45789999999999999999999999999999998876 444 4566531    2222   22235899999887543  


Q ss_pred             --hH-HHHHHhcccCCEEEEEc
Q 019199          257 --PF-DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       257 --~~-~~~~~~l~~~G~iv~~g  275 (344)
                        .+ ...+..++++..++.++
T Consensus       219 ~~~i~~~~~~~mk~~ailIn~s  240 (334)
T 2dbq_A          219 YHLINEERLKLMKKTAILINIA  240 (334)
T ss_dssp             TTCBCHHHHHHSCTTCEEEECS
T ss_pred             HHhhCHHHHhcCCCCcEEEECC
Confidence              12 45677889998888775

>1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A*

Probab=96.40  E-value=0.0032  Score=54.01  Aligned_cols=89  Identities=17%  Similarity=0.172  Sum_probs=57.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhc----CCccEEEECCCCch
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALG----KSLDFIIDTASGDH  256 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~----~~~dvvid~~g~~~  256 (344)
                      .++||+|+ |++|.++++.+...|++|+++++++++.+.   .+.    .|-.+.+.+++..    +++|++|++.|...
T Consensus         2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~---~~~----~Dl~~~~~v~~~~~~~~~~id~lv~~Ag~~~   74 (257)
T 1fjh_A            2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVIA---DLS----TAEGRKQAIADVLAKCSKGMDGLVLCAGLGP   74 (257)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---CTT----SHHHHHHHHHHHHTTCTTCCSEEEECCCCCT
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhcc---ccc----cCCCCHHHHHHHHHHhCCCCCEEEECCCCCC
Confidence            36899998 999999999998899999999988754321   011    1222233333321    56799999988532


Q ss_pred             ------------------hHHHHHHhccc--CCEEEEEcCC
Q 019199          257 ------------------PFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       257 ------------------~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                                        ..+.++..++.  .|++|.++..
T Consensus        75 ~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~  115 (257)
T 1fjh_A           75 QTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSV  115 (257)
T ss_dssp             TCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCG
T ss_pred             CcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECCh
Confidence                              12334444433  3899999765

>1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A*

Probab=96.39  E-value=0.03  Score=45.06  Aligned_cols=115  Identities=12%  Similarity=0.113  Sum_probs=74.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHH-HHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQ-MKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~-~~~~~~~~dvvid  250 (344)
                      .+.++.+||.+|+|. |..+..+++.. .+|++++.+++..+.+.+.   .+.  ...+...+... +.. ...+|+|+.
T Consensus        30 ~~~~~~~vldiG~G~-G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~-~~~~D~v~~  106 (192)
T 1l3i_A           30 EPGKNDVAVDVGCGT-GGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGDAPEALCK-IPDIDIAVV  106 (192)
T ss_dssp             CCCTTCEEEEESCTT-SHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEESCHHHHHTT-SCCEEEEEE
T ss_pred             CCCCCCEEEEECCCC-CHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEecCHHHhccc-CCCCCEEEE
Confidence            348899999999876 77888888766 8999999998877766432   332  22222222222 111 147999986


Q ss_pred             CCCC---chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          251 TASG---DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       251 ~~g~---~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                      ....   ...+..+.+.|+++|+++.....              .+...+..+++.+..+.
T Consensus       107 ~~~~~~~~~~l~~~~~~l~~gG~l~~~~~~--------------~~~~~~~~~~l~~~g~~  153 (192)
T 1l3i_A          107 GGSGGELQEILRIIKDKLKPGGRIIVTAIL--------------LETKFEAMECLRDLGFD  153 (192)
T ss_dssp             SCCTTCHHHHHHHHHHTEEEEEEEEEEECB--------------HHHHHHHHHHHHHTTCC
T ss_pred             CCchHHHHHHHHHHHHhcCCCcEEEEEecC--------------cchHHHHHHHHHHCCCc
Confidence            5441   23477778889999999876322              23455666777665453

>2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A

Probab=96.39  E-value=0.016  Score=51.79  Aligned_cols=88  Identities=23%  Similarity=0.385  Sum_probs=63.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      .|.+|.|+|.|.+|...++.++..|.+|++.+++.++.+.+ .++|....    +.+   +...+.|+|+.++....   
T Consensus       154 ~g~~vgIIG~G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~~----~l~---e~l~~aDvVi~~vp~~~~t~  225 (330)
T 2gcg_A          154 TQSTVGIIGLGRIGQAIARRLKPFGVQRFLYTGRQPRPEEA-AEFQAEFV----STP---ELAAQSDFIVVACSLTPATE  225 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHGGGTCCEEEEESSSCCHHHH-HTTTCEEC----CHH---HHHHHCSEEEECCCCCTTTT
T ss_pred             CCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcchhHH-HhcCceeC----CHH---HHHhhCCEEEEeCCCChHHH
Confidence            57899999999999999999999999999999887665555 45664321    222   12235899999886431   


Q ss_pred             -hH-HHHHHhcccCCEEEEEc
Q 019199          257 -PF-DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       257 -~~-~~~~~~l~~~G~iv~~g  275 (344)
                       .+ ...++.++++..++.++
T Consensus       226 ~~i~~~~~~~mk~gailIn~s  246 (330)
T 2gcg_A          226 GLCNKDFFQKMKETAVFINIS  246 (330)
T ss_dssp             TCBSHHHHHHSCTTCEEEECS
T ss_pred             HhhCHHHHhcCCCCcEEEECC
Confidence             12 45677888888887765

>3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp}

Probab=96.38  E-value=0.0093  Score=51.79  Aligned_cols=76  Identities=18%  Similarity=0.163  Sum_probs=52.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HhCCCcE---EEeCCCHHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS------------TSKKEEAL---SLLGADK---FVVSSDLEQMK  239 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~------------~~~~~~~~---~~~g~~~---~v~~~~~~~~~  239 (344)
                      -.|.++||+|+ +++|.+.+..+...|++|++++++            .++.+...   +..+...   ..|-.+.+.+.
T Consensus        11 l~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~   90 (278)
T 3sx2_A           11 LTGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLS   90 (278)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHH
T ss_pred             CCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHH
Confidence            35789999998 999999999998999999999876            44443332   2334332   23455555443


Q ss_pred             Hh-------cCCccEEEECCCC
Q 019199          240 AL-------GKSLDFIIDTASG  254 (344)
Q Consensus       240 ~~-------~~~~dvvid~~g~  254 (344)
                      +.       .+++|+++++.|.
T Consensus        91 ~~~~~~~~~~g~id~lv~nAg~  112 (278)
T 3sx2_A           91 AALQAGLDELGRLDIVVANAGI  112 (278)
T ss_dssp             HHHHHHHHHHCCCCEEEECCCC
T ss_pred             HHHHHHHHHcCCCCEEEECCCC
Confidence            32       2589999999884

>3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0

Probab=96.38  E-value=0.025  Score=49.09  Aligned_cols=75  Identities=17%  Similarity=0.188  Sum_probs=52.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHH---HHhCCCcE---EEeCCCHHHHHH
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS------------TSKKEEA---LSLLGADK---FVVSSDLEQMKA  240 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~------------~~~~~~~---~~~~g~~~---~v~~~~~~~~~~  240 (344)
                      .|.++||+|+ +++|.+.++.+...|++|++++++            .++.+..   .+..|...   ..|-.+.+.+.+
T Consensus         9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~   88 (281)
T 3s55_A            9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES   88 (281)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred             CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence            5788999997 999999999999999999999986            3333322   13345332   235555544433


Q ss_pred             h-------cCCccEEEECCCC
Q 019199          241 L-------GKSLDFIIDTASG  254 (344)
Q Consensus       241 ~-------~~~~dvvid~~g~  254 (344)
                      .       .+++|+++++.|.
T Consensus        89 ~~~~~~~~~g~id~lv~nAg~  109 (281)
T 3s55_A           89 FVAEAEDTLGGIDIAITNAGI  109 (281)
T ss_dssp             HHHHHHHHHTCCCEEEECCCC
T ss_pred             HHHHHHHhcCCCCEEEECCCC
Confidence            2       2589999999884

>4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A*

Probab=96.38  E-value=0.069  Score=49.26  Aligned_cols=79  Identities=13%  Similarity=-0.017  Sum_probs=50.3

Q ss_pred             cCCCCCCEEEEECC-ChHHHH--HHHHHHHCCCeEEEEeCCch---------------hHHHHHHhCCCcE---EEeCCC
Q 019199          176 KMNQPGKSLGVIGL-GGLGHM--AVKFGKAFGLNVTVLSTSTS---------------KKEEALSLLGADK---FVVSSD  234 (344)
Q Consensus       176 ~~~~~g~~vlI~Ga-g~~G~~--ai~~a~~~g~~V~~~~~~~~---------------~~~~~~~~~g~~~---~v~~~~  234 (344)
                      .....|.++||+|+ +++|++  .+..+...|++|++++++.+               ......++.|...   ..|-.+
T Consensus        55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvtd  134 (418)
T 4eue_A           55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAKKKGLVAKNFIEDAFS  134 (418)
T ss_dssp             CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHHHTTCCEEEEESCTTC
T ss_pred             CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHHHcCCcEEEEEeeCCC
Confidence            33467899999998 899998  44444445999999887532               2233334556432   224455


Q ss_pred             HHHHHHh-------cCCccEEEECCCC
Q 019199          235 LEQMKAL-------GKSLDFIIDTASG  254 (344)
Q Consensus       235 ~~~~~~~-------~~~~dvvid~~g~  254 (344)
                      .+.+.+.       .+++|++++++|.
T Consensus       135 ~~~v~~~v~~i~~~~G~IDiLVnNAG~  161 (418)
T 4eue_A          135 NETKDKVIKYIKDEFGKIDLFVYSLAA  161 (418)
T ss_dssp             HHHHHHHHHHHHHTTCCEEEEEECCCC
T ss_pred             HHHHHHHHHHHHHHcCCCCEEEECCcc
Confidence            5443322       2679999998775

>4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A*

Probab=96.37  E-value=0.0036  Score=56.05  Aligned_cols=89  Identities=16%  Similarity=0.218  Sum_probs=64.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-h--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-H--  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-~--  256 (344)
                      .|.+|.|+|.|.+|...++.++.+|++|++.+++..+.+.+ +.+|...    .+.+   ++....|+++.++... .  
T Consensus       144 ~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~-~~~g~~~----~~l~---ell~~aDvV~l~~P~t~~t~  215 (330)
T 4e5n_A          144 DNATVGFLGMGAIGLAMADRLQGWGATLQYHEAKALDTQTE-QRLGLRQ----VACS---ELFASSDFILLALPLNADTL  215 (330)
T ss_dssp             TTCEEEEECCSHHHHHHHHHTTTSCCEEEEECSSCCCHHHH-HHHTEEE----CCHH---HHHHHCSEEEECCCCSTTTT
T ss_pred             CCCEEEEEeeCHHHHHHHHHHHHCCCEEEEECCCCCcHhHH-HhcCcee----CCHH---HHHhhCCEEEEcCCCCHHHH
Confidence            57899999999999999999999999999999887544444 3556422    1222   2223489998877632 1  


Q ss_pred             -h-HHHHHHhcccCCEEEEEcC
Q 019199          257 -P-FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 -~-~~~~~~~l~~~G~iv~~g~  276 (344)
                       . -...++.++++..+|.++-
T Consensus       216 ~li~~~~l~~mk~gailIN~ar  237 (330)
T 4e5n_A          216 HLVNAELLALVRPGALLVNPCR  237 (330)
T ss_dssp             TCBCHHHHTTSCTTEEEEECSC
T ss_pred             HHhCHHHHhhCCCCcEEEECCC
Confidence             1 2467888999999888863

>3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV}

Probab=96.37  E-value=0.0099  Score=51.60  Aligned_cols=75  Identities=23%  Similarity=0.275  Sum_probs=52.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHHH---HhCCCcE---EEeCCCHHHHHHh----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-------KEEAL---SLLGADK---FVVSSDLEQMKAL----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-------~~~~~---~~~g~~~---~v~~~~~~~~~~~----  241 (344)
                      .|.++||+|+ +++|.+.++.+...|++|++++++.++       ++...   +..+...   ..|-.+.+.+.+.    
T Consensus         5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   84 (274)
T 3e03_A            5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT   84 (274)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence            5788999998 999999999988899999999988653       22221   2334322   2355555544332    


Q ss_pred             ---cCCccEEEECCCC
Q 019199          242 ---GKSLDFIIDTASG  254 (344)
Q Consensus       242 ---~~~~dvvid~~g~  254 (344)
                         .+++|+++++.|.
T Consensus        85 ~~~~g~iD~lvnnAG~  100 (274)
T 3e03_A           85 VDTFGGIDILVNNASA  100 (274)
T ss_dssp             HHHHSCCCEEEECCCC
T ss_pred             HHHcCCCCEEEECCCc
Confidence               2679999999984

>3dfz_A SIRC, precorrin-2 dehydrogenase; NAD dehydrogenase, cobalamin biosynthesis, NAD, oxidoreducta porphyrin biosynthesis; 2.30A {Bacillus megaterium}

Probab=96.36  E-value=0.026  Score=47.39  Aligned_cols=93  Identities=16%  Similarity=0.082  Sum_probs=63.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      -.|.+|||+|+|.+|...+..+...|++|++++.... ++..+. +.|.-..+...-.   .....++|+||-+++.+. 
T Consensus        29 L~gk~VLVVGgG~va~~ka~~Ll~~GA~VtVvap~~~~~l~~l~-~~~~i~~i~~~~~---~~dL~~adLVIaAT~d~~-  103 (223)
T 3dfz_A           29 LKGRSVLVVGGGTIATRRIKGFLQEGAAITVVAPTVSAEINEWE-AKGQLRVKRKKVG---EEDLLNVFFIVVATNDQA-  103 (223)
T ss_dssp             CTTCCEEEECCSHHHHHHHHHHGGGCCCEEEECSSCCHHHHHHH-HTTSCEEECSCCC---GGGSSSCSEEEECCCCTH-
T ss_pred             cCCCEEEEECCCHHHHHHHHHHHHCCCEEEEECCCCCHHHHHHH-HcCCcEEEECCCC---HhHhCCCCEEEECCCCHH-
Confidence            4578899999999999999999999999999987654 344442 3342223322111   111257999999999887 


Q ss_pred             HHHHHHhcccCCEEEEEcC
Q 019199          258 FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~  276 (344)
                      .+..+...+..|..|....
T Consensus       104 ~N~~I~~~ak~gi~VNvvD  122 (223)
T 3dfz_A          104 VNKFVKQHIKNDQLVNMAS  122 (223)
T ss_dssp             HHHHHHHHSCTTCEEEC--
T ss_pred             HHHHHHHHHhCCCEEEEeC
Confidence            6666666666777776543

>3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0

Probab=96.36  E-value=0.016  Score=50.26  Aligned_cols=76  Identities=21%  Similarity=0.228  Sum_probs=51.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH--HhCCCcE---EEeCCCHHHHHHh------cCCcc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL--SLLGADK---FVVSSDLEQMKAL------GKSLD  246 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~--~~~g~~~---~v~~~~~~~~~~~------~~~~d  246 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|+++++.+...+.+.  +..+...   ..|..+.+.+.++      .+++|
T Consensus        29 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~g~iD  108 (273)
T 3uf0_A           29 LAGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVADEIADGGGSAEAVVADLADLEGAANVAEELAATRRVD  108 (273)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHHHHHTTTCEEEEEECCTTCHHHHHHHHHHHHHHSCCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHhcCCCc
Confidence            35788999998 99999999999899999999996543222221  2233322   2344555443332      25799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus       109 ~lv~nAg~  116 (273)
T 3uf0_A          109 VLVNNAGI  116 (273)
T ss_dssp             EEEECCCC
T ss_pred             EEEECCCC
Confidence            99999874

>3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0

Probab=96.36  E-value=0.035  Score=46.25  Aligned_cols=98  Identities=18%  Similarity=0.177  Sum_probs=66.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHhc-----CCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKALG-----KSL  245 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~-----~~~  245 (344)
                      .++.+||-+|+|. |..++.+++.+  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+....     +.|
T Consensus        63 ~~~~~vLdiG~G~-G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~f  141 (225)
T 3tr6_A           63 MQAKKVIDIGTFT-GYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLSPAKDTLAELIHAGQAWQY  141 (225)
T ss_dssp             HTCSEEEEECCTT-SHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHTTTCTTCE
T ss_pred             hCCCEEEEeCCcc-hHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeCCHHHHHHHhhhccCCCCc
Confidence            5678999999864 88888898876  469999999988776664333   432   223333334444333     679


Q ss_pred             cEEEECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+|+-....   ...+..+.+.|+|+|.++.-...
T Consensus       142 D~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~~  176 (225)
T 3tr6_A          142 DLIYIDADKANTDLYYEESLKLLREGGLIAVDNVL  176 (225)
T ss_dssp             EEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECSS
T ss_pred             cEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCCC
Confidence            999854432   22367888999999999876544

>3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium}

Probab=96.35  E-value=0.012  Score=51.76  Aligned_cols=76  Identities=21%  Similarity=0.226  Sum_probs=52.6

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC------------chhHHHHH---HhCCCcE---EEeCCCHHHHH
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS------------TSKKEEAL---SLLGADK---FVVSSDLEQMK  239 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~------------~~~~~~~~---~~~g~~~---~v~~~~~~~~~  239 (344)
                      -.|.++||+|+ +++|.+.++.+...|++|++++++            .++++...   +..|...   ..|-.+.+.+.
T Consensus        26 l~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~  105 (299)
T 3t7c_A           26 VEGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQ  105 (299)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred             cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHH
Confidence            35788999998 999999999998999999999876            44443332   2345332   23555554443


Q ss_pred             Hh-------cCCccEEEECCCC
Q 019199          240 AL-------GKSLDFIIDTASG  254 (344)
Q Consensus       240 ~~-------~~~~dvvid~~g~  254 (344)
                      +.       .+++|+++++.|.
T Consensus       106 ~~~~~~~~~~g~iD~lv~nAg~  127 (299)
T 3t7c_A          106 AAVDDGVTQLGRLDIVLANAAL  127 (299)
T ss_dssp             HHHHHHHHHHSCCCEEEECCCC
T ss_pred             HHHHHHHHHhCCCCEEEECCCC
Confidence            32       2679999998873

>1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2

Probab=96.35  E-value=0.012  Score=49.89  Aligned_cols=73  Identities=15%  Similarity=0.102  Sum_probs=52.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhC-CCcE---EEeCCCHHHHHHhc-------C--C
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLL-GADK---FVVSSDLEQMKALG-------K--S  244 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~-g~~~---~v~~~~~~~~~~~~-------~--~  244 (344)
                      +.++||+|+ |++|.++++.+...|  ++|++++++.++.+.+ ++. +...   ..|..+.+.+.+..       +  +
T Consensus         3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l-~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~   81 (250)
T 1yo6_A            3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATEL-KSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG   81 (250)
T ss_dssp             CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHH-HTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred             CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHH-HhccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence            568999998 999999999998899  9999999998877666 344 3221   23445554433321       2  7


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++|++.|.
T Consensus        82 id~li~~Ag~   91 (250)
T 1yo6_A           82 LSLLINNAGV   91 (250)
T ss_dssp             CCEEEECCCC
T ss_pred             CcEEEECCcc
Confidence            9999998873

>3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP}

Probab=96.35  E-value=0.015  Score=49.19  Aligned_cols=98  Identities=16%  Similarity=0.209  Sum_probs=67.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHhc-----CCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKALG-----KSL  245 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~~-----~~~  245 (344)
                      .++.+||-+|+| .|..++.+++.+  +.+|+.++.+++..+.+++.+   |..   .++..+..+.+..+.     +.|
T Consensus        71 ~~~~~vLdiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~d~~~~l~~l~~~~~~~~f  149 (232)
T 3cbg_A           71 TGAKQVLEIGVF-RGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLGPALATLEQLTQGKPLPEF  149 (232)
T ss_dssp             HTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHHHHHHTSSSCCCE
T ss_pred             cCCCEEEEecCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhcCCCCCc
Confidence            567899999987 688899999887  469999999998777664332   431   223333333344432     579


Q ss_pred             cEEEECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+||-....   ...+..+.+.|+|+|.++.-...
T Consensus       150 D~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~~~  184 (232)
T 3cbg_A          150 DLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDNVL  184 (232)
T ss_dssp             EEEEECSCGGGHHHHHHHHHHTEEEEEEEEEECTT
T ss_pred             CEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeCCC
Confidence            999844332   23478888999999999886544

>1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A*

Probab=96.34  E-value=0.0054  Score=52.14  Aligned_cols=70  Identities=23%  Similarity=0.227  Sum_probs=48.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE--EeCCCHHHHHHh-------c--CCcc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKAL-------G--KSLD  246 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~-------~--~~~d  246 (344)
                      ..+.++||+|+ |++|.+.++.+...|++|+++++++++..      +....  .|-.+.+.+.+.       .  +++|
T Consensus         5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD   78 (241)
T 1dhr_A            5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEA------SASVIVKMTDSFTEQADQVTAEVGKLLGDQKVD   78 (241)
T ss_dssp             -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTS------SEEEECCCCSCHHHHHHHHHHHHHHHHTTCCEE
T ss_pred             CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhcc------CCcEEEEcCCCCHHHHHHHHHHHHHHhCCCCCC
Confidence            45778999998 99999999999889999999998876532      11111  233333333221       1  5799


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        79 ~lv~~Ag~   86 (241)
T 1dhr_A           79 AILCVAGG   86 (241)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcccc
Confidence            99999883

>1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2

Probab=96.33  E-value=0.015  Score=49.91  Aligned_cols=75  Identities=21%  Similarity=0.175  Sum_probs=51.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH----hCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS----LLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~----~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.+..+...|++|++++++.++.....+    +.+...   ..|..+.+.+.+.       .++
T Consensus        13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~   92 (265)
T 1h5q_A           13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   92 (265)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence            4678999998 999999999988899999999986554332212    224322   2345555444332       257


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        93 id~li~~Ag~  102 (265)
T 1h5q_A           93 ISGLIANAGV  102 (265)
T ss_dssp             EEEEEECCCC
T ss_pred             CCEEEECCCc
Confidence            9999999874

>4dll_A 2-hydroxy-3-oxopropionate reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; 2.11A {Polaromonas SP}

Probab=96.33  E-value=0.023  Score=50.59  Aligned_cols=90  Identities=12%  Similarity=0.225  Sum_probs=63.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      ...+|.|+|.|.+|...++.+...|.+|++.++++++.+.+ .+.|....   .+.   .+...+.|+||.++..+....
T Consensus        30 ~~~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~l-~~~g~~~~---~~~---~e~~~~aDvVi~~vp~~~~~~  102 (320)
T 4dll_A           30 YARKITFLGTGSMGLPMARRLCEAGYALQVWNRTPARAASL-AALGATIH---EQA---RAAARDADIVVSMLENGAVVQ  102 (320)
T ss_dssp             CCSEEEEECCTTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HTTTCEEE---SSH---HHHHTTCSEEEECCSSHHHHH
T ss_pred             CCCEEEEECccHHHHHHHHHHHhCCCeEEEEcCCHHHHHHH-HHCCCEee---CCH---HHHHhcCCEEEEECCCHHHHH
Confidence            34589999999999999999988999999999999988877 35564321   122   122356889998888654455


Q ss_pred             HHHH------hcccCCEEEEEcC
Q 019199          260 AYMS------LLKVAGVYVLVGF  276 (344)
Q Consensus       260 ~~~~------~l~~~G~iv~~g~  276 (344)
                      .++.      .++++..++.++.
T Consensus       103 ~v~~~~~~~~~l~~~~~vi~~st  125 (320)
T 4dll_A          103 DVLFAQGVAAAMKPGSLFLDMAS  125 (320)
T ss_dssp             HHHTTTCHHHHCCTTCEEEECSC
T ss_pred             HHHcchhHHhhCCCCCEEEecCC
Confidence            5443      4566667766653

>3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile}

Probab=96.33  E-value=0.022  Score=49.69  Aligned_cols=75  Identities=24%  Similarity=0.230  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-------HHHH---HHhCCCcE---EEeCCCHHHHHHh----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-------KEEA---LSLLGADK---FVVSSDLEQMKAL----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-------~~~~---~~~~g~~~---~v~~~~~~~~~~~----  241 (344)
                      .+.++||+|+ +++|.+.++.+...|++|++++++.++       ++..   .+..+...   ..|-.+.+.+.+.    
T Consensus         8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~   87 (285)
T 3sc4_A            8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIEEAGGQALPIVGDIRDGDAVAAAVAKT   87 (285)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHHHHTSEEEEEECCTTSHHHHHHHHHHH
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHH
Confidence            5688999998 999999999998899999999998762       2222   12334322   2255565544332    


Q ss_pred             ---cCCccEEEECCCC
Q 019199          242 ---GKSLDFIIDTASG  254 (344)
Q Consensus       242 ---~~~~dvvid~~g~  254 (344)
                         .+++|+++++.|.
T Consensus        88 ~~~~g~id~lvnnAg~  103 (285)
T 3sc4_A           88 VEQFGGIDICVNNASA  103 (285)
T ss_dssp             HHHHSCCSEEEECCCC
T ss_pred             HHHcCCCCEEEECCCC
Confidence               2589999999884

>3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans}

Probab=96.32  E-value=0.0058  Score=52.48  Aligned_cols=72  Identities=21%  Similarity=0.157  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh------cCCccEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL------GKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~------~~~~dvvi  249 (344)
                      .+.++||+|+ +++|.+.++.+...|++|++++++.++..   ++++...   ..|-.+.+.+.+.      .+++|+++
T Consensus         8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~---~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~g~id~lv   84 (257)
T 3tl3_A            8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGEDVV---ADLGDRARFAAADVTDEAAVASALDLAETMGTLRIVV   84 (257)
T ss_dssp             --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHHHH---HHTCTTEEEEECCTTCHHHHHHHHHHHHHHSCEEEEE
T ss_pred             cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHHHH---HhcCCceEEEECCCCCHHHHHHHHHHHHHhCCCCEEE
Confidence            4678999998 99999999988889999999998665432   3455332   2345555444332      25899999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        85 ~nAg~   89 (257)
T 3tl3_A           85 NCAGT   89 (257)
T ss_dssp             ECGGG
T ss_pred             ECCCC
Confidence            99883

>1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1

Probab=96.31  E-value=0.0081  Score=53.55  Aligned_cols=90  Identities=21%  Similarity=0.307  Sum_probs=65.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST-STSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH-  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~-  256 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.++ +.++. .+ +++|...   ..+.+   ++..+.|+|+.++.... 
T Consensus       144 l~g~~vgIIG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~~-~~-~~~g~~~---~~~l~---ell~~aDvVil~~p~~~~  215 (320)
T 1gdh_A          144 LDNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSS-DE-ASYQATF---HDSLD---SLLSVSQFFSLNAPSTPE  215 (320)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHH-HH-HHHTCEE---CSSHH---HHHHHCSEEEECCCCCTT
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCCcChh-hh-hhcCcEE---cCCHH---HHHhhCCEEEEeccCchH
Confidence            4688999999999999999999999999999998 76653 34 4567632   11222   22235899998887432 


Q ss_pred             ---hH-HHHHHhcccCCEEEEEcC
Q 019199          257 ---PF-DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 ---~~-~~~~~~l~~~G~iv~~g~  276 (344)
                         .+ ...++.+++++.++.++.
T Consensus       216 t~~~i~~~~l~~mk~gailIn~ar  239 (320)
T 1gdh_A          216 TRYFFNKATIKSLPQGAIVVNTAR  239 (320)
T ss_dssp             TTTCBSHHHHTTSCTTEEEEECSC
T ss_pred             HHhhcCHHHHhhCCCCcEEEECCC
Confidence               12 456788999988888864

>3g0o_A 3-hydroxyisobutyrate dehydrogenase; NAD(P), valine catabolism, tartaric acid, target 11128H, NYSGXRC, PSI-2, structural genomics; HET: TLA; 1.80A {Salmonella typhimurium}

Probab=96.31  E-value=0.035  Score=48.93  Aligned_cols=88  Identities=16%  Similarity=0.181  Sum_probs=62.8

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      .+|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|.....+..     .+...+.|+||.++..+.....+
T Consensus         8 ~~I~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~~~~~~-----~e~~~~aDvvi~~vp~~~~~~~v   81 (303)
T 3g0o_A            8 FHVGIVGLGSMGMGAARSCLRAGLSTWGADLNPQACANL-LAEGACGAAASA-----REFAGVVDALVILVVNAAQVRQV   81 (303)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEESSS-----TTTTTTCSEEEECCSSHHHHHHH
T ss_pred             CeEEEECCCHHHHHHHHHHHHCCCeEEEEECCHHHHHHH-HHcCCccccCCH-----HHHHhcCCEEEEECCCHHHHHHH
Confidence            578999999999999998888999999999999988887 466765412111     11235688898888876445555


Q ss_pred             H-------HhcccCCEEEEEc
Q 019199          262 M-------SLLKVAGVYVLVG  275 (344)
Q Consensus       262 ~-------~~l~~~G~iv~~g  275 (344)
                      +       ..++++..++..+
T Consensus        82 ~~~~~~l~~~l~~g~ivv~~s  102 (303)
T 3g0o_A           82 LFGEDGVAHLMKPGSAVMVSS  102 (303)
T ss_dssp             HC--CCCGGGSCTTCEEEECS
T ss_pred             HhChhhHHhhCCCCCEEEecC
Confidence            4       3455666666554

>2aef_A Calcium-gated potassium channel MTHK; rossmann fold, helix-turn-helix, Ca2+ binding, flexible interface; 1.70A {Methanothermobacterthermautotrophicus} PDB: 2aej_A 2aem_A 3rbx_A 2ogu_A 2fy8_A 3kxd_A

Probab=96.31  E-value=0.026  Score=47.63  Aligned_cols=95  Identities=6%  Similarity=-0.005  Sum_probs=66.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHh-cCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKAL-GKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~-~~~~dvvid~~g~~~  256 (344)
                      ....+++|+|+|.+|...++.+...|. |+++++++++.+.+ + .|...+. |..+.+.+.+. ..++|.++-+++...
T Consensus         7 ~~~~~viI~G~G~~G~~la~~L~~~g~-v~vid~~~~~~~~~-~-~~~~~i~gd~~~~~~l~~a~i~~ad~vi~~~~~d~   83 (234)
T 2aef_A            7 AKSRHVVICGWSESTLECLRELRGSEV-FVLAEDENVRKKVL-R-SGANFVHGDPTRVSDLEKANVRGARAVIVDLESDS   83 (234)
T ss_dssp             ---CEEEEESCCHHHHHHHHHSTTSEE-EEEESCGGGHHHHH-H-TTCEEEESCTTCHHHHHHTTCTTCSEEEECCSCHH
T ss_pred             CCCCEEEEECCChHHHHHHHHHHhCCe-EEEEECCHHHHHHH-h-cCCeEEEcCCCCHHHHHhcCcchhcEEEEcCCCcH
Confidence            345689999999999999999888888 99999998888777 3 5644332 44556666665 478999999988753


Q ss_pred             ---hHHHHHHhcccCCEEEEEcC
Q 019199          257 ---PFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 ---~~~~~~~~l~~~G~iv~~g~  276 (344)
                         ......+.+.+..+++....
T Consensus        84 ~n~~~~~~a~~~~~~~~iia~~~  106 (234)
T 2aef_A           84 ETIHCILGIRKIDESVRIIAEAE  106 (234)
T ss_dssp             HHHHHHHHHHHHCSSSEEEEECS
T ss_pred             HHHHHHHHHHHHCCCCeEEEEEC
Confidence               12344455566667776543

>3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=96.30  E-value=0.0053  Score=52.15  Aligned_cols=96  Identities=17%  Similarity=0.096  Sum_probs=64.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCH-HHHHHh-cCCccEE-EECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFVVSSDL-EQMKAL-GKSLDFI-IDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~-~~~~~~-~~~~dvv-id~~  252 (344)
                      .+|.+||-+|+| .|..+..+++..+.+|++++.+++-++.+++..   +....+...+. +..... ...||.+ +|+.
T Consensus        59 ~~G~rVLdiG~G-~G~~~~~~~~~~~~~v~~id~~~~~~~~a~~~~~~~~~~~~~~~~~a~~~~~~~~~~~FD~i~~D~~  137 (236)
T 3orh_A           59 SKGGRVLEVGFG-MAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  137 (236)
T ss_dssp             TTCEEEEEECCT-TSHHHHHHTTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             cCCCeEEEECCC-ccHHHHHHHHhCCcEEEEEeCCHHHHHHHHHHHhhCCCceEEEeehHHhhcccccccCCceEEEeee
Confidence            789999999987 477888888877779999999998887774332   22222222222 222222 2568887 5655


Q ss_pred             CCc----------hhHHHHHHhcccCCEEEEEc
Q 019199          253 SGD----------HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       253 g~~----------~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ...          ..+.++.+.|+|+|+++.+.
T Consensus       138 ~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~  170 (236)
T 3orh_A          138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  170 (236)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence            431          23567888999999998764

>2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens}

Probab=96.30  E-value=0.067  Score=47.60  Aligned_cols=89  Identities=17%  Similarity=0.217  Sum_probs=58.0

Q ss_pred             EEEEECCChHHHHH-HHHHHHCCCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          183 SLGVIGLGGLGHMA-VKFGKAFGLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       183 ~vlI~Gag~~G~~a-i~~a~~~g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      +|.|+|+|.+|... +..++..+.+++ +.++++++.+.+.+++|....  +.+.+.+-+ ..++|+|+.++........
T Consensus         2 ~vgiiG~G~~g~~~~~~~l~~~~~~~vav~d~~~~~~~~~~~~~g~~~~--~~~~~~~l~-~~~~D~V~i~tp~~~h~~~   78 (332)
T 2glx_A            2 RWGLIGASTIAREWVIGAIRATGGEVVSMMSTSAERGAAYATENGIGKS--VTSVEELVG-DPDVDAVYVSTTNELHREQ   78 (332)
T ss_dssp             EEEEESCCHHHHHTHHHHHHHTTCEEEEEECSCHHHHHHHHHHTTCSCC--BSCHHHHHT-CTTCCEEEECSCGGGHHHH
T ss_pred             eEEEEcccHHHHHhhhHHhhcCCCeEEEEECCCHHHHHHHHHHcCCCcc--cCCHHHHhc-CCCCCEEEEeCChhHhHHH
Confidence            57889999999876 544433777766 567777777666677885322  223222211 1469999999987665777


Q ss_pred             HHHhcccCCEEEEEc
Q 019199          261 YMSLLKVAGVYVLVG  275 (344)
Q Consensus       261 ~~~~l~~~G~iv~~g  275 (344)
                      +..+++.+ +-+.+.
T Consensus        79 ~~~al~~G-k~v~~e   92 (332)
T 2glx_A           79 TLAAIRAG-KHVLCE   92 (332)
T ss_dssp             HHHHHHTT-CEEEEC
T ss_pred             HHHHHHCC-CeEEEe
Confidence            77777765 545554

>1pjz_A Thiopurine S-methyltransferase; polymorphism, S-adenosylmethionine, drug metabolism; NMR {Pseudomonas syringae PV} SCOP: c.66.1.36

Probab=96.30  E-value=0.0088  Score=49.43  Aligned_cols=93  Identities=17%  Similarity=0.041  Sum_probs=60.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-----------------cEEE--eCCCHHHH
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-----------------DKFV--VSSDLEQM  238 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----------------~~~v--~~~~~~~~  238 (344)
                      +.++.+||.+|+|. |..+..+++. |++|+.++.+++.++.++++.+.                 -..+  |..+....
T Consensus        20 ~~~~~~vLD~GCG~-G~~~~~la~~-g~~V~gvD~S~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~~~l~~~   97 (203)
T 1pjz_A           20 VVPGARVLVPLCGK-SQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   97 (203)
T ss_dssp             CCTTCEEEETTTCC-SHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             cCCCCEEEEeCCCC-cHhHHHHHHC-CCeEEEEeCCHHHHHHHHHHccCCcccccccccccccCCccEEEECccccCCcc
Confidence            37889999999864 6677778875 88999999999988888655331                 1111  11111110


Q ss_pred             HHhcCCccEEEECCCC-----c---hhHHHHHHhcccCCEEEEE
Q 019199          239 KALGKSLDFIIDTASG-----D---HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~-----~---~~~~~~~~~l~~~G~iv~~  274 (344)
                      .  .+.||+|++...-     .   ..++.+.+.|+|+|+++.+
T Consensus        98 ~--~~~fD~v~~~~~l~~l~~~~~~~~l~~~~r~LkpgG~~~l~  139 (203)
T 1pjz_A           98 D--IGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLI  139 (203)
T ss_dssp             H--HHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEE
T ss_pred             c--CCCEEEEEECcchhhCCHHHHHHHHHHHHHHcCCCcEEEEE
Confidence            0  1469999974321     1   1356788899999994443

>3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri}

Probab=96.29  E-value=0.022  Score=50.37  Aligned_cols=92  Identities=15%  Similarity=0.147  Sum_probs=63.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc------hhHHHHH--HhCCCcE-EEeCCCHHHHHHhcCCccEEEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST------SKKEEAL--SLLGADK-FVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~------~~~~~~~--~~~g~~~-~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      ..+|||+|+ |.+|..++..+...|.+|++++++.      ++.+.+.  +..+... ..|..+.+.+.+.-.++|+||.
T Consensus         4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~~~l~~a~~~~d~vi~   83 (321)
T 3c1o_A            4 MEKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEHEKMVSVLKQVDIVIS   83 (321)
T ss_dssp             CCCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEE
T ss_pred             ccEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCHHHHHHHHcCCCEEEE
Confidence            356999998 9999999999988899999999886      2332221  2335433 2356677777776678999999


Q ss_pred             CCCCc--hhHHHHHHhcccC---CEEE
Q 019199          251 TASGD--HPFDAYMSLLKVA---GVYV  272 (344)
Q Consensus       251 ~~g~~--~~~~~~~~~l~~~---G~iv  272 (344)
                      +.+..  .....+++.++..   +++|
T Consensus        84 ~a~~~~~~~~~~l~~aa~~~g~v~~~v  110 (321)
T 3c1o_A           84 ALPFPMISSQIHIINAIKAAGNIKRFL  110 (321)
T ss_dssp             CCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred             CCCccchhhHHHHHHHHHHhCCccEEe
Confidence            98743  2245555655443   4776

>1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A*

Probab=96.29  E-value=0.012  Score=52.31  Aligned_cols=75  Identities=20%  Similarity=0.205  Sum_probs=51.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC---------CchhHHHHHH---hCCCcEEEeCCCHHHHHH------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST---------STSKKEEALS---LLGADKFVVSSDLEQMKA------  240 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~---------~~~~~~~~~~---~~g~~~~v~~~~~~~~~~------  240 (344)
                      .|.++||+|+ |++|.+.++.+...|++|++.++         +.++.+.+.+   ..+...+.|..+.+.+.+      
T Consensus         8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~   87 (319)
T 1gz6_A            8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   87 (319)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence            5678999998 99999999999889999999754         4554443322   334444566666542222      


Q ss_pred             -hcCCccEEEECCCC
Q 019199          241 -LGKSLDFIIDTASG  254 (344)
Q Consensus       241 -~~~~~dvvid~~g~  254 (344)
                       ..+++|++|++.|.
T Consensus        88 ~~~g~iD~lVnnAG~  102 (319)
T 1gz6_A           88 DTFGRIDVVVNNAGI  102 (319)
T ss_dssp             HHTSCCCEEEECCCC
T ss_pred             HHcCCCCEEEECCCC
Confidence             13679999999873

>2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B

Probab=96.28  E-value=0.018  Score=51.97  Aligned_cols=90  Identities=20%  Similarity=0.366  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHH-HCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGK-AFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH-  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~-~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~-  256 (344)
                      -.|.+|.|+|.|.+|...++.++ .+|.+|++.+++.++.+.+ +++|...+   .+.+.   +....|+|+.++.... 
T Consensus       161 l~g~~vgIIG~G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~-~~~g~~~~---~~l~e---ll~~aDvVil~vp~~~~  233 (348)
T 2w2k_A          161 PRGHVLGAVGLGAIQKEIARKAVHGLGMKLVYYDVAPADAETE-KALGAERV---DSLEE---LARRSDCVSVSVPYMKL  233 (348)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHH-HHHTCEEC---SSHHH---HHHHCSEEEECCCCSGG
T ss_pred             CCCCEEEEEEECHHHHHHHHHHHHhcCCEEEEECCCCcchhhH-hhcCcEEe---CCHHH---HhccCCEEEEeCCCChH
Confidence            46889999999999999999999 9999999999887665555 35565421   12221   2234788888776421 


Q ss_pred             ---hH-HHHHHhcccCCEEEEEc
Q 019199          257 ---PF-DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       257 ---~~-~~~~~~l~~~G~iv~~g  275 (344)
                         .+ ...++.++++..++.++
T Consensus       234 t~~li~~~~l~~mk~gailin~s  256 (348)
T 2w2k_A          234 THHLIDEAFFAAMKPGSRIVNTA  256 (348)
T ss_dssp             GTTCBCHHHHHHSCTTEEEEECS
T ss_pred             HHHHhhHHHHhcCCCCCEEEECC
Confidence               11 35667778877777665

>3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus}

Probab=96.28  E-value=0.034  Score=48.89  Aligned_cols=90  Identities=18%  Similarity=0.096  Sum_probs=61.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      .+|||+|+ |.+|..++..+...|.+|+++++++.+.. + +  +...+ .|.. .+.+.+...++|+||.+++...   
T Consensus         3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~-~--~~~~~~~Dl~-~~~~~~~~~~~d~Vih~a~~~~~~~   77 (311)
T 3m2p_A            3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-I-N--DYEYRVSDYT-LEDLINQLNDVDAVVHLAATRGSQG   77 (311)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCEEEECCCC-HHHHHHHTTTCSEEEECCCCCCSSS
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-C-C--ceEEEEcccc-HHHHHHhhcCCCEEEEccccCCCCC
Confidence            57999997 99999999999999999999999855544 3 2  43322 3445 6666666679999999887421   


Q ss_pred             ----------hHHHHHHhcccC--CEEEEEcC
Q 019199          257 ----------PFDAYMSLLKVA--GVYVLVGF  276 (344)
Q Consensus       257 ----------~~~~~~~~l~~~--G~iv~~g~  276 (344)
                                ....+++.++..  .++|.++.
T Consensus        78 ~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS  109 (311)
T 3m2p_A           78 KISEFHDNEILTQNLYDACYENNISNIVYAST  109 (311)
T ss_dssp             CGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEE
T ss_pred             hHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcc
Confidence                      124455555443  47887764

>4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti}

Probab=96.27  E-value=0.0082  Score=52.35  Aligned_cols=76  Identities=18%  Similarity=0.168  Sum_probs=51.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.+.++||+|+ |++|.+.++.+...|++|+++++ ++++.+.+.+   ..|...   ..|-.+.+.+.+.       .+
T Consensus        27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g  106 (280)
T 4da9_A           27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG  106 (280)
T ss_dssp             CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred             cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            45788999998 99999999999999999999985 5554443322   334332   2244554333222       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus       107 ~iD~lvnnAg~  117 (280)
T 4da9_A          107 RIDCLVNNAGI  117 (280)
T ss_dssp             CCCEEEEECC-
T ss_pred             CCCEEEECCCc
Confidence            79999998875

>3i9f_A Putative type 11 methyltransferase; structural genomics, PSI-2, protein structure initiative; 2.50A {Sulfolobus solfataricus}

Probab=96.27  E-value=0.01  Score=47.20  Aligned_cols=94  Identities=14%  Similarity=0.136  Sum_probs=65.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC---
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG---  254 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~---  254 (344)
                      +.++.+||-+|+|. |..+..+++... +|++++.+++..+.+.+....-..+..+    .....+.+|+|+....-   
T Consensus        15 ~~~~~~vLDiG~G~-G~~~~~l~~~~~-~v~~vD~s~~~~~~a~~~~~~v~~~~~d----~~~~~~~~D~v~~~~~l~~~   88 (170)
T 3i9f_A           15 EGKKGVIVDYGCGN-GFYCKYLLEFAT-KLYCIDINVIALKEVKEKFDSVITLSDP----KEIPDNSVDFILFANSFHDM   88 (170)
T ss_dssp             SSCCEEEEEETCTT-CTTHHHHHTTEE-EEEEECSCHHHHHHHHHHCTTSEEESSG----GGSCTTCEEEEEEESCSTTC
T ss_pred             cCCCCeEEEECCCC-CHHHHHHHhhcC-eEEEEeCCHHHHHHHHHhCCCcEEEeCC----CCCCCCceEEEEEccchhcc
Confidence            37888999999864 667777777654 9999999998888885553322222222    11123579999864432   


Q ss_pred             ---chhHHHHHHhcccCCEEEEEcCC
Q 019199          255 ---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       255 ---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                         ...++.+.+.|+++|+++.....
T Consensus        89 ~~~~~~l~~~~~~L~pgG~l~~~~~~  114 (170)
T 3i9f_A           89 DDKQHVISEVKRILKDDGRVIIIDWR  114 (170)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEEEEC
T ss_pred             cCHHHHHHHHHHhcCCCCEEEEEEcC
Confidence               13478888999999999988655

>3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster}

Probab=96.26  E-value=0.012  Score=57.48  Aligned_cols=75  Identities=17%  Similarity=0.166  Sum_probs=47.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC---------CchhHHHHH---HhCCCcEEEeCCCHHHHHHh-----
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST---------STSKKEEAL---SLLGADKFVVSSDLEQMKAL-----  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~---------~~~~~~~~~---~~~g~~~~v~~~~~~~~~~~-----  241 (344)
                      .|.++||+|+ +++|.+.+..+...|++|+++++         +.++.+.+.   +..+...+.|..+.+...++     
T Consensus        18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~   97 (613)
T 3oml_A           18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI   97 (613)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence            5788999988 99999999998889999999876         444333322   34455666676665433332     


Q ss_pred             --cCCccEEEECCCC
Q 019199          242 --GKSLDFIIDTASG  254 (344)
Q Consensus       242 --~~~~dvvid~~g~  254 (344)
                        -+++|++|++.|.
T Consensus        98 ~~~g~iDiLVnnAGi  112 (613)
T 3oml_A           98 KAFGRVDILVNNAGI  112 (613)
T ss_dssp             -------CEECCCCC
T ss_pred             HHCCCCcEEEECCCC
Confidence              1579999999884

>1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A*

Probab=96.25  E-value=0.037  Score=47.23  Aligned_cols=98  Identities=21%  Similarity=0.206  Sum_probs=67.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh------cCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~------~~~  244 (344)
                      .++.+||-+|+| .|..++.+++.+  +.+|+.++.+++..+.+++.   .|..   .++..+..+.+...      .+.
T Consensus        78 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~  156 (247)
T 1sui_A           78 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  156 (247)
T ss_dssp             TTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSGGGTTC
T ss_pred             hCcCEEEEeCCC-cCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEECCHHHHHHHHHhccCCCCC
Confidence            566789999986 488888999886  57999999999877766433   3431   23333333444433      367


Q ss_pred             ccEEEECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ||+||-....   ...+..+.+.|+++|.++.-...
T Consensus       157 fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~~~  192 (247)
T 1sui_A          157 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTL  192 (247)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEECTT
T ss_pred             EEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEecCC
Confidence            9999854332   23477888999999999876433

>2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis}

Probab=96.24  E-value=0.049  Score=52.93  Aligned_cols=74  Identities=20%  Similarity=0.335  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-chhH-HHHHHhCCCcEEEeCCCH-HHHH----Hh---cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-TSKK-EEALSLLGADKFVVSSDL-EQMK----AL---GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-~~~~-~~~~~~~g~~~~v~~~~~-~~~~----~~---~~~~dvv  248 (344)
                      .|+++||+|+ +++|.+.+..+...|++|++.++. .++. +++ ++.|...+....+. +...    +.   -+++|++
T Consensus       321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i-~~~g~~~~~~~~Dv~~~~~~~~~~~~~~~G~iDiL  399 (604)
T 2et6_A          321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEI-KAAGGEAWPDQHDVAKDSEAIIKNVIDKYGTIDIL  399 (604)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HHTTCEEEEECCCHHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHH-HhcCCeEEEEEcChHHHHHHHHHHHHHhcCCCCEE
Confidence            4678899998 899999999999999999998743 3332 333 44565444444444 2221    11   2679999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus       400 VnNAGi  405 (604)
T 2et6_A          400 VNNAGI  405 (604)
T ss_dssp             EECCCC
T ss_pred             EECCCC
Confidence            999884

>3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium}

Probab=96.24  E-value=0.0092  Score=51.69  Aligned_cols=71  Identities=18%  Similarity=0.149  Sum_probs=51.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHh-------cCCccEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      ..|+++||+|+ +++|.+.++.+...|++|+++++++++..    . .. ....|-.+.+.+.+.       .+++|+++
T Consensus        12 ~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lv   86 (269)
T 3vtz_A           12 FTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDILV   86 (269)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence            57899999998 99999999999889999999998876431    1 11 123455665544332       25899999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        87 ~nAg~   91 (269)
T 3vtz_A           87 NNAGI   91 (269)
T ss_dssp             ECCCC
T ss_pred             ECCCc
Confidence            99874

>4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A*

Probab=96.24  E-value=0.0068  Score=52.37  Aligned_cols=93  Identities=15%  Similarity=0.194  Sum_probs=63.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC---CCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-cCCccE
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAF---GLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-GKSLDF  247 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~---g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-~~~~dv  247 (344)
                      +++|.+||-+|+|. |..+..+++..   |++|++++.+++.++.+++.   .+..   ..+.. +..   .+ ...+|+
T Consensus        68 ~~~~~~vLDlGcGt-G~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D~~---~~~~~~~d~  142 (261)
T 4gek_A           68 VQPGTQVYDLGCSL-GAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-DIR---DIAIENASM  142 (261)
T ss_dssp             CCTTCEEEEETCTT-THHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CTT---TCCCCSEEE
T ss_pred             CCCCCEEEEEeCCC-CHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-ccc---ccccccccc
Confidence            48999999999863 77778888764   67999999999887777543   2321   12211 111   11 256888


Q ss_pred             EEECCCC-----c---hhHHHHHHhcccCCEEEEEc
Q 019199          248 IIDTASG-----D---HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       248 vid~~g~-----~---~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |+-...-     +   ..++++.+.|+|+|+++...
T Consensus       143 v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e  178 (261)
T 4gek_A          143 VVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSE  178 (261)
T ss_dssp             EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             ceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEe
Confidence            8754321     1   24778889999999998764

>2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica}

Probab=96.23  E-value=0.011  Score=52.85  Aligned_cols=98  Identities=16%  Similarity=0.101  Sum_probs=61.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-CCc-EEEeCCCHHHHHHhcC--CccEEEECCCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-GAD-KFVVSSDLEQMKALGK--SLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-g~~-~~v~~~~~~~~~~~~~--~~dvvid~~g~  254 (344)
                      .+.+|||+|+ |.+|..++..+...|.+|++++++........+.+ +.. ...|..+.+.+.+...  ++|+||++.+.
T Consensus        20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~~~~~~~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   99 (333)
T 2q1w_A           20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLKDHPNLTFVEGSIADHALVNQLIGDLQPDAVVHTAAS   99 (333)
T ss_dssp             -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSCCCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHhhcCCceEEEEeCCCHHHHHHHHhccCCcEEEECcee
Confidence            4578999997 99999999998889999999998754321111111 211 1234556665555443  49999998874


Q ss_pred             chh--------------HHHHHHhccc--CCEEEEEcCC
Q 019199          255 DHP--------------FDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       255 ~~~--------------~~~~~~~l~~--~G~iv~~g~~  277 (344)
                      ...              ...+++.+.+  .+++|.++..
T Consensus       100 ~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~  138 (333)
T 2q1w_A          100 YKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTA  138 (333)
T ss_dssp             CSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEG
T ss_pred             cCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcH
Confidence            221              2234444433  3689887643

>3u62_A Shikimate dehydrogenase; shikimate pathway, oxidoreductase; 1.45A {Thermotoga maritima}

Probab=96.23  E-value=0.0021  Score=55.29  Aligned_cols=87  Identities=15%  Similarity=0.127  Sum_probs=58.6

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      .| +++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.++++.   ....+   +.+...++|++|++++...  
T Consensus       108 ~~-~vliiGaGg~a~ai~~~L~~~G~~~I~v~nR~~~ka~~la~~~~~---~~~~~---~~~~~~~aDiVInatp~gm~p  180 (253)
T 3u62_A          108 KE-PVVVVGAGGAARAVIYALLQMGVKDIWVVNRTIERAKALDFPVKI---FSLDQ---LDEVVKKAKSLFNTTSVGMKG  180 (253)
T ss_dssp             CS-SEEEECCSHHHHHHHHHHHHTTCCCEEEEESCHHHHHTCCSSCEE---EEGGG---HHHHHHTCSEEEECSSTTTTS
T ss_pred             CC-eEEEECcHHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHccc---CCHHH---HHhhhcCCCEEEECCCCCCCC
Confidence            46 89999999999999999999999 999999998887655333331   22222   2223356999999885311  


Q ss_pred             ---hHHHHHHhcccCCEEEEEc
Q 019199          257 ---PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       257 ---~~~~~~~~l~~~G~iv~~g  275 (344)
                         .+  -...++++..++++-
T Consensus       181 ~~~~i--~~~~l~~~~~V~Div  200 (253)
T 3u62_A          181 EELPV--SDDSLKNLSLVYDVI  200 (253)
T ss_dssp             CCCSC--CHHHHTTCSEEEECS
T ss_pred             CCCCC--CHHHhCcCCEEEEee
Confidence               01  123456666666653

>2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2

Probab=96.22  E-value=0.014  Score=49.41  Aligned_cols=74  Identities=18%  Similarity=0.126  Sum_probs=52.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCC-------eEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh-----
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGL-------NVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL-----  241 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~-------~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~-----  241 (344)
                      +.++||+|+ |++|.+.+..+...|+       +|++++++.++.+.+.+++   +...   ..|-.+.+.+.+.     
T Consensus         2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~   81 (244)
T 2bd0_A            2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV   81 (244)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred             CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence            467899998 9999999988888898       8999999987766553333   4321   2344555444332     


Q ss_pred             --cCCccEEEECCCC
Q 019199          242 --GKSLDFIIDTASG  254 (344)
Q Consensus       242 --~~~~dvvid~~g~  254 (344)
                        .+++|++|++.|.
T Consensus        82 ~~~g~id~li~~Ag~   96 (244)
T 2bd0_A           82 ERYGHIDCLVNNAGV   96 (244)
T ss_dssp             HHTSCCSEEEECCCC
T ss_pred             HhCCCCCEEEEcCCc
Confidence              2579999998873

>1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A*

Probab=96.22  E-value=0.022  Score=48.63  Aligned_cols=75  Identities=17%  Similarity=0.141  Sum_probs=50.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCe-EEEEeCCch--hHHHHHHhC-CCcE---EEeCCCH-HHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLN-VTVLSTSTS--KKEEALSLL-GADK---FVVSSDL-EQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~-V~~~~~~~~--~~~~~~~~~-g~~~---~v~~~~~-~~~~~~-------~~  243 (344)
                      .+.++||+|+ |++|.++++.+...|++ |++++++.+  ..+.+.+.. +...   ..|-.+. +.+.+.       .+
T Consensus         4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g   83 (254)
T 1sby_A            4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence            4678999987 99999999999899996 888888763  344443333 2221   2244443 333222       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus        84 ~id~lv~~Ag~   94 (254)
T 1sby_A           84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCcc
Confidence            79999999883

>1g8a_A Fibrillarin-like PRE-rRNA processing protein; rRNA binding, RNA binding, structural genomics, BSGC structure funded by NIH; 1.40A {Pyrococcus horikoshii} SCOP: c.66.1.3 PDB: 2nnw_B 3nmu_F* 3nvk_I* 3nvm_B 1pry_A

Probab=96.21  E-value=0.017  Score=48.39  Aligned_cols=96  Identities=20%  Similarity=0.251  Sum_probs=63.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHhCC---CcEEEeCC--CHHHHHHhcCCccEEEE
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSLLG---ADKFVVSS--DLEQMKALGKSLDFIID  250 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~--~~~~~~~~~~~~dvvid  250 (344)
                      ++++++||-+|+|. |..+..+++..|  .+|+.++.+++..+.+.+...   .-..+..+  +..........+|+|+-
T Consensus        71 ~~~~~~vLDlG~G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~D~v~~  149 (227)
T 1g8a_A           71 IKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIFE  149 (227)
T ss_dssp             CCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCEEEEEeccC-CHHHHHHHHHhCCCeEEEEEECCHHHHHHHHHHHhccCCCEEEEccCCCcchhhcccCCceEEEE
Confidence            47899999999875 778888888764  599999999875555433221   11222221  11111112357999986


Q ss_pred             CCCCch---h-HHHHHHhcccCCEEEEE
Q 019199          251 TASGDH---P-FDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~~~---~-~~~~~~~l~~~G~iv~~  274 (344)
                      ....+.   . +..+.+.|+|+|+++..
T Consensus       150 ~~~~~~~~~~~l~~~~~~LkpgG~l~~~  177 (227)
T 1g8a_A          150 DVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCCHhHHHHHHHHHHHhcCCCCEEEEE
Confidence            555432   2 77888999999999887

>4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A

Probab=96.18  E-value=0.013  Score=50.76  Aligned_cols=76  Identities=18%  Similarity=0.236  Sum_probs=51.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHhCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEA---LSLLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~---~~~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      -.|.++||+|+ |++|.+.++.+...|++|++++++.++ .+.+   .+..+...   ..|..+.+.+.+.       .+
T Consensus        27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g  106 (271)
T 4iin_A           27 FTGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDG  106 (271)
T ss_dssp             CSCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcC
Confidence            35788999998 999999999988899999999985443 3322   13344332   2244454433322       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus       107 ~id~li~nAg~  117 (271)
T 4iin_A          107 GLSYLVNNAGV  117 (271)
T ss_dssp             SCCEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            89999999884

>3iv6_A Putative Zn-dependent alcohol dehydrogenase; alpha/beta fold, rossmann-fold, structural genomics, PSI-2, structure initiative; HET: SAM; 2.70A {Rhodobacter sphaeroides}

Probab=96.18  E-value=0.037  Score=47.68  Aligned_cols=96  Identities=21%  Similarity=0.226  Sum_probs=63.6

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHH--HHHhcCCccEEEECC
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQ--MKALGKSLDFIIDTA  252 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~--~~~~~~~~dvvid~~  252 (344)
                      ..+.++.+||-+|+|. |..++.+++. |++|++++.+++.++.+++..... ...+..+.+.  .....+.||+|+...
T Consensus        41 l~l~~g~~VLDlGcGt-G~~a~~La~~-g~~V~gvD~S~~ml~~Ar~~~~~~~v~~~~~~~~~~~~~~~~~~fD~Vv~~~  118 (261)
T 3iv6_A           41 ENIVPGSTVAVIGAST-RFLIEKALER-GASVTVFDFSQRMCDDLAEALADRCVTIDLLDITAEIPKELAGHFDFVLNDR  118 (261)
T ss_dssp             TTCCTTCEEEEECTTC-HHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTSSSCCEEEECCTTSCCCGGGTTCCSEEEEES
T ss_pred             cCCCCcCEEEEEeCcc-hHHHHHHHhc-CCEEEEEECCHHHHHHHHHHHHhccceeeeeecccccccccCCCccEEEEhh
Confidence            3458899999999874 7778888774 789999999999988886665432 1112221111  011235799998643


Q ss_pred             CC--------chhHHHHHHhcccCCEEEEE
Q 019199          253 SG--------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       253 g~--------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      .-        ...+..+.+.+ |+|+++..
T Consensus       119 ~l~~~~~~~~~~~l~~l~~lL-PGG~l~lS  147 (261)
T 3iv6_A          119 LINRFTTEEARRACLGMLSLV-GSGTVRAS  147 (261)
T ss_dssp             CGGGSCHHHHHHHHHHHHHHH-TTSEEEEE
T ss_pred             hhHhCCHHHHHHHHHHHHHhC-cCcEEEEE
Confidence            21        12466777788 99999754

>3hnr_A Probable methyltransferase BT9727_4108; structural genomics, PSI-2, protein structure initiative; 2.80A {Bacillus thuringiensis serovarkonkukian}

Probab=96.17  E-value=0.013  Score=48.81  Aligned_cols=93  Identities=23%  Similarity=0.225  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-CcEEEeCCCHHHHHHhcCCccEEEECCCC---
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASG---  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~dvvid~~g~---  254 (344)
                      .++.+||-+|+|. |..+..+++. ++++++++.+++..+.+.+.+. ....+..+-.+ +. ..+.+|+|+....-   
T Consensus        44 ~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~~~  119 (220)
T 3hnr_A           44 KSFGNVLEFGVGT-GNLTNKLLLA-GRTVYGIEPSREMRMIAKEKLPKEFSITEGDFLS-FE-VPTSIDTIVSTYAFHHL  119 (220)
T ss_dssp             TCCSEEEEECCTT-SHHHHHHHHT-TCEEEEECSCHHHHHHHHHHSCTTCCEESCCSSS-CC-CCSCCSEEEEESCGGGS
T ss_pred             cCCCeEEEeCCCC-CHHHHHHHhC-CCeEEEEeCCHHHHHHHHHhCCCceEEEeCChhh-cC-CCCCeEEEEECcchhcC
Confidence            6888999999864 6667777765 8899999999998888865554 11122111111 11 11579999864321   


Q ss_pred             --ch---hHHHHHHhcccCCEEEEEc
Q 019199          255 --DH---PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       255 --~~---~~~~~~~~l~~~G~iv~~g  275 (344)
                        +.   .+..+.+.|+|+|+++...
T Consensus       120 ~~~~~~~~l~~~~~~LkpgG~l~i~~  145 (220)
T 3hnr_A          120 TDDEKNVAIAKYSQLLNKGGKIVFAD  145 (220)
T ss_dssp             CHHHHHHHHHHHHHHSCTTCEEEEEE
T ss_pred             ChHHHHHHHHHHHHhcCCCCEEEEEe
Confidence              11   5788889999999998874

>3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2}

Probab=96.17  E-value=0.074  Score=47.87  Aligned_cols=89  Identities=16%  Similarity=0.191  Sum_probs=61.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHC-CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAF-GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~-g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      -+|.|+|+|.+|...+..++.. +.+++ +.++++++.+.+.+++|...   +.+.+.+-+ ...+|+|+.++.......
T Consensus         6 ~~vgiiG~G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~~~~~~l~-~~~~D~V~i~tp~~~h~~   81 (354)
T 3db2_A            6 VGVAAIGLGRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DATMEALLA-REDVEMVIITVPNDKHAE   81 (354)
T ss_dssp             EEEEEECCSHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CSSHHHHHH-CSSCCEEEECSCTTSHHH
T ss_pred             ceEEEEccCHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cCCHHHHhc-CCCCCEEEEeCChHHHHH
Confidence            3688999999998877777665 67766 55677777776667778642   334333221 257999999998776577


Q ss_pred             HHHHhcccCCEEEEEc
Q 019199          260 AYMSLLKVAGVYVLVG  275 (344)
Q Consensus       260 ~~~~~l~~~G~iv~~g  275 (344)
                      .+..+++.+-. +++.
T Consensus        82 ~~~~al~~gk~-vl~E   96 (354)
T 3db2_A           82 VIEQCARSGKH-IYVE   96 (354)
T ss_dssp             HHHHHHHTTCE-EEEE
T ss_pred             HHHHHHHcCCE-EEEc
Confidence            77777777644 4554

>4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A*

Probab=96.16  E-value=0.012  Score=50.74  Aligned_cols=71  Identities=15%  Similarity=0.057  Sum_probs=50.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++++++.++.  +.+.+  ....|-.+++.+.+.       -+++|++++
T Consensus         9 L~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~--~~~~~--~~~~Dv~~~~~v~~~~~~~~~~~G~iDilVn   84 (261)
T 4h15_A            9 LRGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG--LPEEL--FVEADLTTKEGCAIVAEATRQRLGGVDVIVH   84 (261)
T ss_dssp             CTTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT--SCTTT--EEECCTTSHHHHHHHHHHHHHHTSSCSEEEE
T ss_pred             CCCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC--CCcEE--EEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence            36889999987 8999999999999999999999875531  10111  123455555443332       367999999


Q ss_pred             CCC
Q 019199          251 TAS  253 (344)
Q Consensus       251 ~~g  253 (344)
                      +.|
T Consensus        85 nAG   87 (261)
T 4h15_A           85 MLG   87 (261)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            877

>1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A*

Probab=96.16  E-value=0.021  Score=49.84  Aligned_cols=93  Identities=20%  Similarity=0.317  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC----CC----------c-EEEeCCCHHHHHHhc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL----GA----------D-KFVVSSDLEQMKALG  242 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~----g~----------~-~~v~~~~~~~~~~~~  242 (344)
                      ..+.+||++|+|. |..+..+++. +. +|++++.+++..+.+++.+    +.          . .++..+..+.+.. .
T Consensus        74 ~~~~~VLdiG~G~-G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~D~~~~l~~-~  150 (281)
T 1mjf_A           74 PKPKRVLVIGGGD-GGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-N  150 (281)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-C
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEECchHHHhcc-c
Confidence            4568999998753 6667777777 65 9999999999888886555    21          1 2333332334444 5


Q ss_pred             CCccEEEECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199          243 KSLDFIIDTASG----------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       243 ~~~dvvid~~g~----------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +.+|+|+-....          ...++.+.+.|+|+|.++..
T Consensus       151 ~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~  192 (281)
T 1mjf_A          151 RGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  192 (281)
T ss_dssp             CCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            679998743321          23478888999999999875

>3f4k_A Putative methyltransferase; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; 2.30A {Bacteroides thetaiotaomicron} PDB: 3t0i_A* 3svz_A* 3sxj_A*

Probab=96.16  E-value=0.0064  Score=51.97  Aligned_cols=103  Identities=12%  Similarity=0.088  Sum_probs=68.1

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~d  246 (344)
                      +.....+.++.+||-+|+|. |..+..+++..+.+|++++.+++..+.+.+.   .|..  ..+...+...+....+.+|
T Consensus        38 l~~l~~~~~~~~vLDiG~G~-G~~~~~l~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD  116 (257)
T 3f4k_A           38 VSFINELTDDAKIADIGCGT-GGQTLFLADYVKGQITGIDLFPDFIEIFNENAVKANCADRVKGITGSMDNLPFQNEELD  116 (257)
T ss_dssp             HTTSCCCCTTCEEEEETCTT-SHHHHHHHHHCCSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HHHHhcCCCCCeEEEeCCCC-CHHHHHHHHhCCCeEEEEECCHHHHHHHHHHHHHcCCCCceEEEECChhhCCCCCCCEE
Confidence            44444558899999999874 8888899998877999999998877666333   3321  2121122111111125799


Q ss_pred             EEEECCC-----CchhHHHHHHhcccCCEEEEEc
Q 019199          247 FIIDTAS-----GDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       247 vvid~~g-----~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +|+....     -...+..+.+.|+|+|+++...
T Consensus       117 ~v~~~~~l~~~~~~~~l~~~~~~L~pgG~l~~~~  150 (257)
T 3f4k_A          117 LIWSEGAIYNIGFERGMNEWSKYLKKGGFIAVSE  150 (257)
T ss_dssp             EEEEESCSCCCCHHHHHHHHHTTEEEEEEEEEEE
T ss_pred             EEEecChHhhcCHHHHHHHHHHHcCCCcEEEEEE
Confidence            9975322     2345788888999999998875

>1ixk_A Methyltransferase; open beta sheet; 1.90A {Pyrococcus horikoshii} SCOP: c.66.1.38

Probab=96.14  E-value=0.035  Score=49.24  Aligned_cols=99  Identities=14%  Similarity=0.196  Sum_probs=64.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCC-cEEEeCCCHHHHHHhcCCccEEEE-
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGA-DKFVVSSDLEQMKALGKSLDFIID-  250 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~-~~~v~~~~~~~~~~~~~~~dvvid-  250 (344)
                      +++|++||-+|+|+ |..+.++++.+  +.+|++++.++++++.+.+.   .|. ...+...+........+.||+|+- 
T Consensus       116 ~~~g~~VLDlg~G~-G~~t~~la~~~~~~~~v~avD~s~~~l~~a~~~~~~~g~~~v~~~~~D~~~~~~~~~~fD~Il~d  194 (315)
T 1ixk_A          116 PKPGEIVADMAAAP-GGKTSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD  194 (315)
T ss_dssp             CCTTCEEEECCSSC-SHHHHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred             CCCCCEEEEeCCCC-CHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHHHHhCCCeEEEEECChhhcccccccCCEEEEe
Confidence            48899999998753 55677778776  35899999999987766443   353 222333332222223457999874 


Q ss_pred             --CCCC-------------------------chhHHHHHHhcccCCEEEEEcCC
Q 019199          251 --TASG-------------------------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 --~~g~-------------------------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        |+|.                         ...+..+.+.|+|+|+++....+
T Consensus       195 ~Pcsg~g~~~~~p~~~~~~~~~~~~~~~~~q~~~L~~~~~~LkpGG~lv~stcs  248 (315)
T 1ixk_A          195 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS  248 (315)
T ss_dssp             CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred             CCCCCcccccCChhHhhcCCHHHHHHHHHHHHHHHHHHHHhCCCCCEEEEEeCC
Confidence              3231                         13467888999999999876443

>4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti}

Probab=96.14  E-value=0.094  Score=46.67  Aligned_cols=88  Identities=14%  Similarity=0.241  Sum_probs=61.1

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF-GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~-g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      +|.|+|+|.+|...+..++.. +.+++ +.++++++.+.+.+++|..    +.+.+.+-+ ...+|+|+.++........
T Consensus         5 ~vgiiG~G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~~~~~~l~-~~~~D~V~i~tp~~~h~~~   79 (331)
T 4hkt_A            5 RFGLLGAGRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VRTIDAIEA-AADIDAVVICTPTDTHADL   79 (331)
T ss_dssp             EEEEECCSHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----ECCHHHHHH-CTTCCEEEECSCGGGHHHH
T ss_pred             EEEEECCCHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cCCHHHHhc-CCCCCEEEEeCCchhHHHH
Confidence            588899999999887777665 66776 5667777777766778864    334333222 2469999999987765777


Q ss_pred             HHHhcccCCEEEEEcC
Q 019199          261 YMSLLKVAGVYVLVGF  276 (344)
Q Consensus       261 ~~~~l~~~G~iv~~g~  276 (344)
                      +..+++.+ +-+++..
T Consensus        80 ~~~al~~g-k~v~~EK   94 (331)
T 4hkt_A           80 IERFARAG-KAIFCEK   94 (331)
T ss_dssp             HHHHHHTT-CEEEECS
T ss_pred             HHHHHHcC-CcEEEec
Confidence            77777765 4455543

>3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens}

Probab=96.14  E-value=0.05  Score=47.43  Aligned_cols=87  Identities=23%  Similarity=0.258  Sum_probs=61.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      .+|.|+|+|.+|...+..+...|.+|++.++++++.+.+ .+.|...   ..+...   ...+.|+||.++..+.....+
T Consensus         2 ~~i~iIG~G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~-~~~g~~~---~~~~~~---~~~~aDvvi~~vp~~~~~~~v   74 (287)
T 3pef_A            2 QKFGFIGLGIMGSAMAKNLVKAGCSVTIWNRSPEKAEEL-AALGAER---AATPCE---VVESCPVTFAMLADPAAAEEV   74 (287)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHTTCEE---CSSHHH---HHHHCSEEEECCSSHHHHHHH
T ss_pred             CEEEEEeecHHHHHHHHHHHHCCCeEEEEcCCHHHHHHH-HHCCCee---cCCHHH---HHhcCCEEEEEcCCHHHHHHH
Confidence            468899999999999999988999999999999988877 4556432   222221   113478888888865435555


Q ss_pred             H-------HhcccCCEEEEEc
Q 019199          262 M-------SLLKVAGVYVLVG  275 (344)
Q Consensus       262 ~-------~~l~~~G~iv~~g  275 (344)
                      +       ..++++..++..+
T Consensus        75 ~~~~~~l~~~l~~~~~vi~~s   95 (287)
T 3pef_A           75 CFGKHGVLEGIGEGRGYVDMS   95 (287)
T ss_dssp             HHSTTCHHHHCCTTCEEEECS
T ss_pred             HcCcchHhhcCCCCCEEEeCC
Confidence            5       4556666666664

>3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A*

Probab=96.13  E-value=0.024  Score=50.30  Aligned_cols=89  Identities=17%  Similarity=0.120  Sum_probs=62.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHH-hcCCccEEEECCCCch-
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKA-LGKSLDFIIDTASGDH-  256 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~-~~~~~dvvid~~g~~~-  256 (344)
                      .+|.|+|.|.+|.+.++.++..|.  +|++.++++++.+.+ ++.|. +...+...     + ...+.|+||.++.... 
T Consensus        34 ~kI~IIG~G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a-~~~G~~~~~~~~~~-----~~~~~~aDvVilavp~~~~  107 (314)
T 3ggo_A           34 QNVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTSIA-----KVEDFSPDFVMLSSPVRTF  107 (314)
T ss_dssp             SEEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESCTT-----GGGGGCCSEEEECSCGGGH
T ss_pred             CEEEEEeeCHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHH-HHCCCcchhcCCHH-----HHhhccCCEEEEeCCHHHH
Confidence            579999999999999999999998  999999999988887 57775 23222111     2 2356899998887654 


Q ss_pred             --hHHHHHHhcccCCEEEEEcC
Q 019199          257 --PFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 --~~~~~~~~l~~~G~iv~~g~  276 (344)
                        .+..+...++++..+++++.
T Consensus       108 ~~vl~~l~~~l~~~~iv~d~~S  129 (314)
T 3ggo_A          108 REIAKKLSYILSEDATVTDQGS  129 (314)
T ss_dssp             HHHHHHHHHHSCTTCEEEECCS
T ss_pred             HHHHHHHhhccCCCcEEEECCC
Confidence              13334445566666666653

>1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6

Probab=96.11  E-value=0.044  Score=48.01  Aligned_cols=86  Identities=20%  Similarity=0.241  Sum_probs=61.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                      +|.|+|+|.+|...+..+...|.+|++.++++++.+.+. +.|...   ..+.+.   ...++|+||.++..+.....++
T Consensus         7 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~~~~~---~~~~~D~vi~~v~~~~~~~~~~   79 (299)
T 1vpd_A            7 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---ASTAKA---IAEQCDVIITMLPNSPHVKEVA   79 (299)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CSSHHH---HHHHCSEEEECCSSHHHHHHHH
T ss_pred             eEEEECchHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cCCHHH---HHhCCCEEEEECCCHHHHHHHH
Confidence            688999999999998888888999999999988887773 456421   223221   1134899999998655455555


Q ss_pred             -------HhcccCCEEEEEc
Q 019199          263 -------SLLKVAGVYVLVG  275 (344)
Q Consensus       263 -------~~l~~~G~iv~~g  275 (344)
                             ..++++..++.++
T Consensus        80 ~~~~~l~~~l~~~~~vv~~s   99 (299)
T 1vpd_A           80 LGENGIIEGAKPGTVLIDMS   99 (299)
T ss_dssp             HSTTCHHHHCCTTCEEEECS
T ss_pred             hCcchHhhcCCCCCEEEECC
Confidence                   4566777776664

>1npy_A Hypothetical shikimate 5-dehydrogenase-like protein HI0607; structural genomics, PSI, protein structure initiative; 1.75A {Haemophilus influenzae} SCOP: c.2.1.7 c.58.1.5

Probab=96.11  E-value=0.031  Score=48.45  Aligned_cols=97  Identities=18%  Similarity=0.206  Sum_probs=65.6

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ++...+. ..+.+++|+|+|+.+.+++..+...|+ +|+++.++.++.+.+.++++.+  +... ..     ...+|++|
T Consensus       110 ~l~~~~~-~~~~~vlvlGaGgaarav~~~L~~~G~~~i~v~nRt~~ka~~la~~~~~~--~~~~-~~-----~~~~DivI  180 (271)
T 1npy_A          110 LIEKYHL-NKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYA--YINS-LE-----NQQADILV  180 (271)
T ss_dssp             HHHHTTC-CTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCE--EESC-CT-----TCCCSEEE
T ss_pred             HHHHhCC-CCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCc--cchh-hh-----cccCCEEE
Confidence            4444333 456789999999999999999999998 8999999988877776777752  2111 10     24699999


Q ss_pred             ECCCCchh-------HHHHHHhcccCCEEEEEcC
Q 019199          250 DTASGDHP-------FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       250 d~~g~~~~-------~~~~~~~l~~~G~iv~~g~  276 (344)
                      ++++....       .......++++..++++-.
T Consensus       181 naTp~gm~~~~~~~~~~~~~~~l~~~~~v~DlvY  214 (271)
T 1npy_A          181 NVTSIGMKGGKEEMDLAFPKAFIDNASVAFDVVA  214 (271)
T ss_dssp             ECSSTTCTTSTTTTSCSSCHHHHHHCSEEEECCC
T ss_pred             ECCCCCccCccccCCCCCCHHHcCCCCEEEEeec
Confidence            99875431       1111245566666666643

>4g65_A TRK system potassium uptake protein TRKA; structural genomics, center for structural genomics of infec diseases, csgid, niaid; HET: MSE; 2.09A {Vibrio vulnificus}

Probab=96.10  E-value=0.02  Score=53.67  Aligned_cols=92  Identities=11%  Similarity=0.105  Sum_probs=68.1

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchhHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPFD  259 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~~~  259 (344)
                      -+|+|.|+|.+|..+++.+...|..|++++.++++.+.+.+.++...+. |..+++.+.+.+ ..+|+++-++++.. .+
T Consensus         4 M~iiI~G~G~vG~~la~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~i~Gd~~~~~~L~~Agi~~ad~~ia~t~~De-~N   82 (461)
T 4g65_A            4 MKIIILGAGQVGGTLAENLVGENNDITIVDKDGDRLRELQDKYDLRVVNGHASHPDVLHEAGAQDADMLVAVTNTDE-TN   82 (461)
T ss_dssp             EEEEEECCSHHHHHHHHHTCSTTEEEEEEESCHHHHHHHHHHSSCEEEESCTTCHHHHHHHTTTTCSEEEECCSCHH-HH
T ss_pred             CEEEEECCCHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHhcCcEEEEEcCCCHHHHHhcCCCcCCEEEEEcCChH-HH
Confidence            3688999999999998888888999999999999998887778765433 456677787775 78999998888754 33


Q ss_pred             ----HHHHhcccCCEEEEE
Q 019199          260 ----AYMSLLKVAGVYVLV  274 (344)
Q Consensus       260 ----~~~~~l~~~G~iv~~  274 (344)
                          .+.+.+.+.-+++..
T Consensus        83 l~~~~~Ak~~~~~~~~iar  101 (461)
T 4g65_A           83 MAACQVAFTLFNTPNRIAR  101 (461)
T ss_dssp             HHHHHHHHHHHCCSSEEEE
T ss_pred             HHHHHHHHHhcCCccceeE
Confidence                333344344444444

>3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A*

Probab=96.08  E-value=0.012  Score=50.05  Aligned_cols=75  Identities=28%  Similarity=0.276  Sum_probs=51.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc-hhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST-SKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~-~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.+..+...|++|+++++.. ++.+.+.   +..|...   ..|-.+.+.+.+.       .++
T Consensus         3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~   82 (246)
T 3osu_A            3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS   82 (246)
T ss_dssp             CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            4578999987 9999999999999999999887744 4443332   2344332   2344555444332       258


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        83 id~lv~nAg~   92 (246)
T 3osu_A           83 LDVLVNNAGI   92 (246)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEEEECCCC
Confidence            9999999884

>2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17

Probab=96.08  E-value=0.028  Score=49.92  Aligned_cols=96  Identities=21%  Similarity=0.233  Sum_probs=63.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCC--------c-EEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA--------D-KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--------~-~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..+.+||++|+|. |..+..+++..+ .+|++++-+++-.+.+++.+..        . .++..+..+.+....+.||+|
T Consensus       107 ~~~~~VLdIG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~D~~~~l~~~~~~fD~I  185 (314)
T 2b2c_A          107 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI  185 (314)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEChHHHHHHhcCCCceEE
Confidence            3457999999753 667777777654 5999999999988888665531        1 222222233344444679999


Q ss_pred             EECCCC----------chhHHHHHHhcccCCEEEEEc
Q 019199          249 IDTASG----------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 id~~g~----------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +-....          ...++.+.+.|+|+|.++.-.
T Consensus       186 i~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~~  222 (314)
T 2b2c_A          186 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  222 (314)
T ss_dssp             EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEEC
Confidence            854321          344778889999999998763

>3don_A Shikimate dehydrogenase; alpha-beta structure, rossman fold, amino-acid biosynthesis, amino acid biosynthesis, NADP, oxidoreductase; 2.10A {Staphylococcus epidermidis} PDB: 3doo_A*

Probab=96.06  E-value=0.0047  Score=53.79  Aligned_cols=99  Identities=12%  Similarity=0.058  Sum_probs=62.8

Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEE
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      .++.....--.+.+++|+|+|++|.+++..+...|+ +|+++.++.++.+.+.+  .. ..+   ..+.+.+...++|++
T Consensus       106 ~~L~~~~~~l~~k~vlvlGaGg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~--~~-~~~---~~~~~~~~~~~aDiV  179 (277)
T 3don_A          106 NGLKQIYEGIEDAYILILGAGGASKGIANELYKIVRPTLTVANRTMSRFNNWSL--NI-NKI---NLSHAESHLDEFDII  179 (277)
T ss_dssp             HHHHHHSTTGGGCCEEEECCSHHHHHHHHHHHTTCCSCCEEECSCGGGGTTCCS--CC-EEE---CHHHHHHTGGGCSEE
T ss_pred             HHHHHhCCCcCCCEEEEECCcHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH--hc-ccc---cHhhHHHHhcCCCEE
Confidence            344444332457889999999999999999999999 89999999887654421  11 111   223344444679999


Q ss_pred             EECCCCchhHHH-----HHHhcccCCEEEEEc
Q 019199          249 IDTASGDHPFDA-----YMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 id~~g~~~~~~~-----~~~~l~~~G~iv~~g  275 (344)
                      |++++... ...     -...++++..++++.
T Consensus       180 InaTp~Gm-~~~~~~~l~~~~l~~~~~V~D~v  210 (277)
T 3don_A          180 INTTPAGM-NGNTDSVISLNRLASHTLVSDIV  210 (277)
T ss_dssp             EECCC--------CCSSCCTTCCSSCEEEESC
T ss_pred             EECccCCC-CCCCcCCCCHHHcCCCCEEEEec
Confidence            99987432 111     134466666666664

>3bus_A REBM, methyltransferase; rebeccamycin synthesis; HET: SAH; 2.65A {Lechevalieria aerocolonigenes}

Probab=96.06  E-value=0.027  Score=48.53  Aligned_cols=102  Identities=20%  Similarity=0.203  Sum_probs=66.0

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHHHHHhcCCccEE
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ....++++.+||-+|+|. |..+..+++..+++|++++.+++..+.+++.   .|.  ...+...+...+....+.+|+|
T Consensus        55 ~~~~~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v  133 (273)
T 3bus_A           55 ALLDVRSGDRVLDVGCGI-GKPAVRLATARDVRVTGISISRPQVNQANARATAAGLANRVTFSYADAMDLPFEDASFDAV  133 (273)
T ss_dssp             HHSCCCTTCEEEEESCTT-SHHHHHHHHHSCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCSCTTCEEEE
T ss_pred             HhcCCCCCCEEEEeCCCC-CHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECccccCCCCCCCccEE
Confidence            333448899999999874 7788888888899999999998877666433   231  1111111111111112569999


Q ss_pred             EECCC-----C-chhHHHHHHhcccCCEEEEEcC
Q 019199          249 IDTAS-----G-DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       249 id~~g-----~-~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +..-.     . ...+..+.+.|+|+|+++....
T Consensus       134 ~~~~~l~~~~~~~~~l~~~~~~L~pgG~l~i~~~  167 (273)
T 3bus_A          134 WALESLHHMPDRGRALREMARVLRPGGTVAIADF  167 (273)
T ss_dssp             EEESCTTTSSCHHHHHHHHHTTEEEEEEEEEEEE
T ss_pred             EEechhhhCCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            75322     1 2347788889999999987653

>2g5c_A Prephenate dehydrogenase; TYRA, oxidoreductase; HET: NAD; 1.90A {Aquifex aeolicus} SCOP: a.100.1.12 c.2.1.6

Probab=96.05  E-value=0.03  Score=48.64  Aligned_cols=87  Identities=15%  Similarity=0.136  Sum_probs=59.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcC-CccEEEECCCCchh-
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGK-SLDFIIDTASGDHP-  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~-~~dvvid~~g~~~~-  257 (344)
                      +|.|+|+|.+|.+.++.++..|.  +|++.++++++.+.+ ++.|.. ... . +.   .+... +.|+|+.++..... 
T Consensus         3 ~I~iIG~G~mG~~~a~~l~~~g~~~~V~~~d~~~~~~~~~-~~~g~~~~~~-~-~~---~~~~~~~aDvVilavp~~~~~   76 (281)
T 2g5c_A            3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGT-T-SI---AKVEDFSPDFVMLSSPVRTFR   76 (281)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEE-S-CG---GGGGGTCCSEEEECSCHHHHH
T ss_pred             EEEEEecCHHHHHHHHHHHhcCCCcEEEEEeCCHHHHHHH-HHCCCccccc-C-CH---HHHhcCCCCEEEEcCCHHHHH
Confidence            68899999999999999988887  899999998888777 567753 222 1 11   11224 68999998876541 


Q ss_pred             --HHHHHHhcccCCEEEEEc
Q 019199          258 --FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 --~~~~~~~l~~~G~iv~~g  275 (344)
                        +..+...++++..++.++
T Consensus        77 ~v~~~l~~~l~~~~iv~~~~   96 (281)
T 2g5c_A           77 EIAKKLSYILSEDATVTDQG   96 (281)
T ss_dssp             HHHHHHHHHSCTTCEEEECC
T ss_pred             HHHHHHHhhCCCCcEEEECC
Confidence              222333456666666554

>1inl_A Spermidine synthase; beta-barrel, rossman fold, structural genomics, PSI, protein structure initiative; 1.50A {Thermotoga maritima} SCOP: c.66.1.17 PDB: 1jq3_A*

Probab=96.05  E-value=0.016  Score=50.94  Aligned_cols=95  Identities=20%  Similarity=0.220  Sum_probs=61.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC--------Cc-EEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG--------AD-KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g--------~~-~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..+.+||++|+|. |..+..+++..+ .+|++++-+++..+.+++.+.        .. .++..+..+.+....+.+|+|
T Consensus        89 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~~~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I  167 (296)
T 1inl_A           89 PNPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVI  167 (296)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEE
T ss_pred             CCCCEEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccCCCceEEEECcHHHHHhhCCCCceEE
Confidence            3458999998753 666777777655 599999999988877755441        11 222222222233334679998


Q ss_pred             EECCCC-----------chhHHHHHHhcccCCEEEEE
Q 019199          249 IDTASG-----------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       249 id~~g~-----------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +-....           ...++.+.+.|+|+|.++..
T Consensus       168 i~d~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  204 (296)
T 1inl_A          168 IIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE  204 (296)
T ss_dssp             EEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEcCCCcccCchhhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            742211           23478888999999999876

>2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa}

Probab=96.03  E-value=0.012  Score=52.51  Aligned_cols=95  Identities=19%  Similarity=0.196  Sum_probs=62.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      -+|||+|+ |.+|..+++.+...|.+|++++++.++...+ ...+... ..|..+.+.+.+...++|+||.+.+...   
T Consensus        14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l-~~~~~~~~~~Dl~d~~~~~~~~~~~d~vih~a~~~~~~~   92 (342)
T 2x4g_A           14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRL-AYLEPECRVAEMLDHAGLERALRGLDGVIFSAGYYPSRP   92 (342)
T ss_dssp             CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGG-GGGCCEEEECCTTCHHHHHHHTTTCSEEEEC--------
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhh-ccCCeEEEEecCCCHHHHHHHHcCCCEEEECCccCcCCC
Confidence            37999998 9999999999988999999999887655433 2224332 2355666677776678999999887421   


Q ss_pred             ------------hHHHHHHhccc-C-CEEEEEcCC
Q 019199          257 ------------PFDAYMSLLKV-A-GVYVLVGFP  277 (344)
Q Consensus       257 ------------~~~~~~~~l~~-~-G~iv~~g~~  277 (344)
                                  ....+++.+.+ + +++|.++..
T Consensus        93 ~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~  127 (342)
T 2x4g_A           93 RRWQEEVASALGQTNPFYAACLQARVPRILYVGSA  127 (342)
T ss_dssp             ----CHHHHHHHHHHHHHHHHHHHTCSCEEEECCG
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCH
Confidence                        01234444433 3 688888654

>2ahr_A Putative pyrroline carboxylate reductase; pyrroline reductase, proline biosynthesis, NAD(P protein, rossmann fold, doain swapping; HET: NAP; 2.15A {Streptococcus pyogenes} SCOP: a.100.1.10 c.2.1.6 PDB: 2amf_A

Probab=96.02  E-value=0.046  Score=46.80  Aligned_cols=85  Identities=16%  Similarity=0.229  Sum_probs=61.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                      +|.|+|+|.+|...+..+...|.+|.+.++++++.+.+.+++|...   ..+...   ...++|+|+.++... ....++
T Consensus         5 ~i~iiG~G~mG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~g~~~---~~~~~~---~~~~~D~Vi~~v~~~-~~~~v~   77 (259)
T 2ahr_A            5 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPY---AMSHQD---LIDQVDLVILGIKPQ-LFETVL   77 (259)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCB---CSSHHH---HHHTCSEEEECSCGG-GHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCeEEEECCCHHHHHHHHHHcCCEe---eCCHHH---HHhcCCEEEEEeCcH-hHHHHH
Confidence            6889999999999888887788899999999888877755667431   222222   123589999999844 477777


Q ss_pred             HhcccCCEEEEE
Q 019199          263 SLLKVAGVYVLV  274 (344)
Q Consensus       263 ~~l~~~G~iv~~  274 (344)
                      ..++++..++..
T Consensus        78 ~~l~~~~~vv~~   89 (259)
T 2ahr_A           78 KPLHFKQPIISM   89 (259)
T ss_dssp             TTSCCCSCEEEC
T ss_pred             HHhccCCEEEEe
Confidence            777766555554

>3doj_A AT3G25530, dehydrogenase-like protein; gamma-hydroxybutyrate dehydrogenase, 4-hydroxybutyrate dehydrogenase; 2.10A {Arabidopsis thaliana}

Probab=96.02  E-value=0.054  Score=47.85  Aligned_cols=88  Identities=20%  Similarity=0.172  Sum_probs=61.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      -.+|.|+|.|.+|...+..+...|.+|++.++++++.+.+ .+.|...   ..+...   ...+.|+||-++..+.....
T Consensus        21 m~~I~iIG~G~mG~~~A~~l~~~G~~V~~~dr~~~~~~~l-~~~g~~~---~~~~~~---~~~~aDvvi~~vp~~~~~~~   93 (310)
T 3doj_A           21 MMEVGFLGLGIMGKAMSMNLLKNGFKVTVWNRTLSKCDEL-VEHGASV---CESPAE---VIKKCKYTIAMLSDPCAALS   93 (310)
T ss_dssp             SCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSGGGGHHH-HHTTCEE---CSSHHH---HHHHCSEEEECCSSHHHHHH
T ss_pred             CCEEEEECccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHH-HHCCCeE---cCCHHH---HHHhCCEEEEEcCCHHHHHH
Confidence            3579999999999999999988999999999999988887 4667532   122221   11347888888877544555


Q ss_pred             HH-------HhcccCCEEEEEc
Q 019199          261 YM-------SLLKVAGVYVLVG  275 (344)
Q Consensus       261 ~~-------~~l~~~G~iv~~g  275 (344)
                      ++       ..++++..++.++
T Consensus        94 v~~~~~~l~~~l~~g~~vv~~s  115 (310)
T 3doj_A           94 VVFDKGGVLEQICEGKGYIDMS  115 (310)
T ss_dssp             HHHSTTCGGGGCCTTCEEEECS
T ss_pred             HHhCchhhhhccCCCCEEEECC
Confidence            55       3345566666654

>2hk9_A Shikimate dehydrogenase; shikimate pathway, drug design, oxidoreductase; HET: ATR SKM NAP; 2.20A {Aquifex aeolicus} PDB: 2hk8_A 2hk7_A

Probab=96.02  E-value=0.014  Score=50.73  Aligned_cols=92  Identities=18%  Similarity=0.146  Sum_probs=63.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -.+.+++|+|+|.+|.+++..+...|++|++.+++.++.+.+.+++|.. +.+  +.   .+...++|+++.+++....-
T Consensus       127 ~~~~~v~iiGaG~~g~aia~~L~~~g~~V~v~~r~~~~~~~l~~~~g~~-~~~--~~---~~~~~~aDiVi~atp~~~~~  200 (275)
T 2hk9_A          127 VKEKSILVLGAGGASRAVIYALVKEGAKVFLWNRTKEKAIKLAQKFPLE-VVN--SP---EEVIDKVQVIVNTTSVGLKD  200 (275)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSHHHHHHHTTTSCEE-ECS--CG---GGTGGGCSEEEECSSTTSST
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHcCCe-eeh--hH---HhhhcCCCEEEEeCCCCCCC
Confidence            3578999999999999999998888999999999988877765566632 111  11   12235699999999754310


Q ss_pred             --HHH--HHhcccCCEEEEEcC
Q 019199          259 --DAY--MSLLKVAGVYVLVGF  276 (344)
Q Consensus       259 --~~~--~~~l~~~G~iv~~g~  276 (344)
                        ...  ...++++..+++++.
T Consensus       201 ~~~~~i~~~~l~~g~~viDv~~  222 (275)
T 2hk9_A          201 EDPEIFNYDLIKKDHVVVDIIY  222 (275)
T ss_dssp             TCCCSSCGGGCCTTSEEEESSS
T ss_pred             CCCCCCCHHHcCCCCEEEEcCC
Confidence              011  345677777776654

>4g2n_A D-isomer specific 2-hydroxyacid dehydrogenase, Na; structural genomics, protein structure initiative, nysgrc, P biology; 1.70A {Polaromonas SP}

Probab=96.02  E-value=0.019  Score=51.66  Aligned_cols=87  Identities=20%  Similarity=0.317  Sum_probs=63.1

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~-  257 (344)
                      .|.+|.|+|.|.+|...++.++.+|.+|++.++.....+..  . |...+   .+.   .++....|+|+-++.. +.+ 
T Consensus       172 ~gktvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~--~-g~~~~---~~l---~ell~~sDvV~l~~Plt~~T~  242 (345)
T 4g2n_A          172 TGRRLGIFGMGRIGRAIATRARGFGLAIHYHNRTRLSHALE--E-GAIYH---DTL---DSLLGASDIFLIAAPGRPELK  242 (345)
T ss_dssp             TTCEEEEESCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH--T-TCEEC---SSH---HHHHHTCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEEeChhHHHHHHHHHHCCCEEEEECCCCcchhhh--c-CCeEe---CCH---HHHHhhCCEEEEecCCCHHHH
Confidence            47899999999999999999999999999999876544333  2 54321   222   2233458999888773 221 


Q ss_pred             ---HHHHHHhcccCCEEEEEc
Q 019199          258 ---FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g  275 (344)
                         -...++.++++..+|.++
T Consensus       243 ~li~~~~l~~mk~gailIN~a  263 (345)
T 4g2n_A          243 GFLDHDRIAKIPEGAVVINIS  263 (345)
T ss_dssp             TCBCHHHHHHSCTTEEEEECS
T ss_pred             HHhCHHHHhhCCCCcEEEECC
Confidence               256788899999888886

>2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A

Probab=96.01  E-value=0.038  Score=48.28  Aligned_cols=95  Identities=20%  Similarity=0.081  Sum_probs=64.7

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHH--HHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKE--EALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~--~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      ..+|||+|+ |.+|..+++.+...| .+|+++++++++..  .+ ...+... ..|..+.+.+.+.-.++|+||.+.+..
T Consensus         5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l-~~~~~~~~~~D~~d~~~l~~~~~~~d~vi~~a~~~   83 (299)
T 2wm3_A            5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKEL-RLQGAEVVQGDQDDQVIMELALNGAYATFIVTNYW   83 (299)
T ss_dssp             CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHH-HHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCHH
T ss_pred             CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHH-HHCCCEEEEecCCCHHHHHHHHhcCCEEEEeCCCC
Confidence            468999998 999999998888778 89999999876542  22 3445443 235567777776667899999988732


Q ss_pred             h---------hHHHHHHhccc--CCEEEEEcC
Q 019199          256 H---------PFDAYMSLLKV--AGVYVLVGF  276 (344)
Q Consensus       256 ~---------~~~~~~~~l~~--~G~iv~~g~  276 (344)
                      .         ....+++.++.  -++++..+.
T Consensus        84 ~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~  115 (299)
T 2wm3_A           84 ESCSQEQEVKQGKLLADLARRLGLHYVVYSGL  115 (299)
T ss_dssp             HHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred             ccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence            1         12344444433  357887543

>2kw5_A SLR1183 protein; structural genomics, northeast structural genomics consortium (NESG), PSI-2, protein structure initiative, unknown function; NMR {Synechocystis} PDB: 3mer_A

Probab=95.98  E-value=0.017  Score=47.32  Aligned_cols=96  Identities=23%  Similarity=0.317  Sum_probs=61.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      .++ +||-+|+|. |..+..+++. |.+|++++.+++..+.+++.+   +....+...+........+.+|+|+.+....
T Consensus        29 ~~~-~vLdiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~~~  105 (202)
T 2kw5_A           29 PQG-KILCLAEGE-GRNACFLASL-GYEVTAVDQSSVGLAKAKQLAQEKGVKITTVQSNLADFDIVADAWEGIVSIFCHL  105 (202)
T ss_dssp             CSS-EEEECCCSC-THHHHHHHTT-TCEEEEECSSHHHHHHHHHHHHHHTCCEEEECCBTTTBSCCTTTCSEEEEECCCC
T ss_pred             CCC-CEEEECCCC-CHhHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCceEEEEcChhhcCCCcCCccEEEEEhhcC
Confidence            566 899999865 7777777764 789999999988777664433   2222222222111111125699998754321


Q ss_pred             ------hhHHHHHHhcccCCEEEEEcCC
Q 019199          256 ------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       256 ------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                            ..+..+.+.|+|+|+++.....
T Consensus       106 ~~~~~~~~l~~~~~~L~pgG~l~~~~~~  133 (202)
T 2kw5_A          106 PSSLRQQLYPKVYQGLKPGGVFILEGFA  133 (202)
T ss_dssp             CHHHHHHHHHHHHTTCCSSEEEEEEEEC
T ss_pred             CHHHHHHHHHHHHHhcCCCcEEEEEEec
Confidence                  2366777889999999887654

>2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii}

Probab=95.97  E-value=0.025  Score=50.59  Aligned_cols=87  Identities=22%  Similarity=0.309  Sum_probs=59.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc---
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD---  255 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~---  255 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++ +.+ +++|...    .+.+.   .....|+|+.++...   
T Consensus       144 l~g~~vgIIG~G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~-~~~g~~~----~~l~e---~l~~aDiVil~vp~~~~t  214 (333)
T 2d0i_A          144 LYGKKVGILGMGAIGKAIARRLIPFGVKLYYWSRHRKV-NVE-KELKARY----MDIDE---LLEKSDIVILALPLTRDT  214 (333)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCH-HHH-HHHTEEE----CCHHH---HHHHCSEEEECCCCCTTT
T ss_pred             CCcCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcch-hhh-hhcCcee----cCHHH---HHhhCCEEEEcCCCChHH
Confidence            45789999999999999999999999999999988776 444 3555321    12221   123478888777654   


Q ss_pred             -hhH-HHHHHhcccCCEEEEEc
Q 019199          256 -HPF-DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       256 -~~~-~~~~~~l~~~G~iv~~g  275 (344)
                       ..+ ...+..++++ .++.++
T Consensus       215 ~~~i~~~~~~~mk~g-ilin~s  235 (333)
T 2d0i_A          215 YHIINEERVKKLEGK-YLVNIG  235 (333)
T ss_dssp             TTSBCHHHHHHTBTC-EEEECS
T ss_pred             HHHhCHHHHhhCCCC-EEEECC
Confidence             112 2446677777 666654

>3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A*

Probab=95.97  E-value=0.13  Score=46.17  Aligned_cols=90  Identities=16%  Similarity=0.096  Sum_probs=60.4

Q ss_pred             CEEEEECCChHHH-HHHHHHHHC-CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          182 KSLGVIGLGGLGH-MAVKFGKAF-GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       182 ~~vlI~Gag~~G~-~ai~~a~~~-g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -++.|+|+|.+|. ..+..++.. +.+++ +.++++++.+.+.+++|....   .+.+.+-+ ...+|+|+.++......
T Consensus        28 ~rigiIG~G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~---~~~~~ll~-~~~~D~V~i~tp~~~h~  103 (350)
T 3rc1_A           28 IRVGVIGCADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV---EGYPALLE-RDDVDAVYVPLPAVLHA  103 (350)
T ss_dssp             EEEEEESCCHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE---ESHHHHHT-CTTCSEEEECCCGGGHH
T ss_pred             eEEEEEcCcHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc---CCHHHHhc-CCCCCEEEECCCcHHHH
Confidence            3688999999998 566666555 67776 556777777777677886543   22222211 24699999999877657


Q ss_pred             HHHHHhcccCCEEEEEcC
Q 019199          259 DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~  276 (344)
                      ..+..+++.+-. |++..
T Consensus       104 ~~~~~al~aGk~-Vl~EK  120 (350)
T 3rc1_A          104 EWIDRALRAGKH-VLAEK  120 (350)
T ss_dssp             HHHHHHHHTTCE-EEEES
T ss_pred             HHHHHHHHCCCc-EEEeC
Confidence            777777776644 55543

>2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP}

Probab=95.97  E-value=0.0055  Score=52.19  Aligned_cols=66  Identities=18%  Similarity=0.200  Sum_probs=44.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh----cCCccEEEECCCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFIIDTASG  254 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~----~~~~dvvid~~g~  254 (344)
                      .++||+|+ |.+|..++..+...|++|++++++.++.+.   .+-    .|..+.+.+.+.    .+++|++|++.|.
T Consensus         2 k~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~~---~~~----~D~~~~~~~~~~~~~~~~~~d~vi~~Ag~   72 (255)
T 2dkn_A            2 SVIAITGSASGIGAALKELLARAGHTVIGIDRGQADIEA---DLS----TPGGRETAVAAVLDRCGGVLDGLVCCAGV   72 (255)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEEC---CTT----SHHHHHHHHHHHHHHHTTCCSEEEECCCC
T ss_pred             cEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHccc---ccc----CCcccHHHHHHHHHHcCCCccEEEECCCC
Confidence            36899998 999999999888899999999988654311   000    111222222222    2579999998874

>2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A*

Probab=95.97  E-value=0.015  Score=51.34  Aligned_cols=96  Identities=21%  Similarity=0.216  Sum_probs=64.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC--------C-cEEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG--------A-DKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g--------~-~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..+.+||++|+|. |..+..+++..+ .+|+.++.+++-.+.+++.+.        . -.++..+..+.+....+.||+|
T Consensus        94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~Da~~~l~~~~~~fD~I  172 (304)
T 2o07_A           94 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI  172 (304)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred             CCCCEEEEECCCc-hHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHhhCCCCceEE
Confidence            4568999998753 667777777654 599999999988877755442        1 1233333333344444679999


Q ss_pred             EECCCC----------chhHHHHHHhcccCCEEEEEc
Q 019199          249 IDTASG----------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 id~~g~----------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +-....          ...++.+.+.|+++|.++.-.
T Consensus       173 i~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  209 (304)
T 2o07_A          173 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG  209 (304)
T ss_dssp             EEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred             EECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence            843222          234788899999999998653

>3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum}

Probab=95.97  E-value=0.051  Score=45.94  Aligned_cols=98  Identities=19%  Similarity=0.193  Sum_probs=66.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh------cCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~------~~~  244 (344)
                      .++.+||-+|+| .|..++.+++.+  +.+|+.++.+++..+.+++.   .|..   .++..+..+.+...      .+.
T Consensus        69 ~~~~~VLeiG~G-~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~gda~~~l~~l~~~~~~~~~  147 (237)
T 3c3y_A           69 VNAKKTIEVGVF-TGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQGQESEGS  147 (237)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHSTTCTTC
T ss_pred             hCCCEEEEeCCC-CCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEcCHHHHHHHHHhccCCCCC
Confidence            567789999986 377888888886  56999999998877666433   3532   23333333444443      367


Q ss_pred             ccEEEECCCC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ||+||-....   ...++.+.+.|+|+|.++.-...
T Consensus       148 fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~~~  183 (237)
T 3c3y_A          148 YDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDNTL  183 (237)
T ss_dssp             EEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECTT
T ss_pred             cCEEEECCchHHHHHHHHHHHHhcCCCeEEEEecCC
Confidence            9999854432   23367888999999999876443

>4dmg_A Putative uncharacterized protein TTHA1493; rRNA, methyltransferase, S-adenosyl-methionine, 23S ribosoma transferase; HET: SAM; 1.70A {Thermus thermophilus}

Probab=95.96  E-value=0.042  Score=50.38  Aligned_cols=97  Identities=13%  Similarity=0.137  Sum_probs=64.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc-EEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      ++|++||-+|+|+ |..++.+++. |++|+.++.+++.++.+++.   .|.+ .+...+..+.+....+.||+|+-....
T Consensus       213 ~~g~~VLDlg~Gt-G~~sl~~a~~-ga~V~avDis~~al~~a~~n~~~ng~~~~~~~~D~~~~l~~~~~~fD~Ii~dpP~  290 (393)
T 4dmg_A          213 RPGERVLDVYSYV-GGFALRAARK-GAYALAVDKDLEALGVLDQAALRLGLRVDIRHGEALPTLRGLEGPFHHVLLDPPT  290 (393)
T ss_dssp             CTTCEEEEESCTT-THHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHHTCCCEEEESCHHHHHHTCCCCEEEEEECCCC
T ss_pred             cCCCeEEEcccch-hHHHHHHHHc-CCeEEEEECCHHHHHHHHHHHHHhCCCCcEEEccHHHHHHHhcCCCCEEEECCCc
Confidence            6799999998753 5556666663 88899999999887766433   2433 343333334444434459999754432


Q ss_pred             ---------------chhHHHHHHhcccCCEEEEEcCC
Q 019199          255 ---------------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       255 ---------------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                                     ...+..+++.|+|+|+++.+...
T Consensus       291 f~~~~~~~~~~~~~~~~ll~~a~~~LkpGG~Lv~~s~s  328 (393)
T 4dmg_A          291 LVKRPEELPAMKRHLVDLVREALRLLAEEGFLWLSSCS  328 (393)
T ss_dssp             CCSSGGGHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhcCCCCEEEEEECC
Confidence                           13467778899999999877554

>3evz_A Methyltransferase; NYSGXRC, NEW YORK SGX research CE structural genomics, protein structure initiative, pyrococc furiosus, PSI-2; 2.20A {Pyrococcus furiosus}

Probab=95.96  E-value=0.014  Score=48.94  Aligned_cols=117  Identities=19%  Similarity=0.074  Sum_probs=74.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC-cEEEeCCCHHHHHHh-cCCccEEEECC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA-DKFVVSSDLEQMKAL-GKSLDFIIDTA  252 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~~v~~~~~~~~~~~-~~~~dvvid~~  252 (344)
                      ++++++||-+|+|..|..++.+++..+.+|++++.+++..+.+++.   .|. ..++..+. ...... .+.+|+|+-..
T Consensus        53 ~~~~~~vLDlG~G~~G~~~~~la~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~v~~~~~d~-~~~~~~~~~~fD~I~~np  131 (230)
T 3evz_A           53 LRGGEVALEIGTGHTAMMALMAEKFFNCKVTATEVDEEFFEYARRNIERNNSNVRLVKSNG-GIIKGVVEGTFDVIFSAP  131 (230)
T ss_dssp             CCSSCEEEEECCTTTCHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHTTCCCEEEECSS-CSSTTTCCSCEEEEEECC
T ss_pred             cCCCCEEEEcCCCHHHHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHHhCCCcEEEeCCc-hhhhhcccCceeEEEECC
Confidence            4789999999988568888888887678999999998877666433   332 22222221 001111 25799998542


Q ss_pred             CC-------------------------chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          253 SG-------------------------DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       253 g~-------------------------~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                      .-                         ...+..+.+.|+|+|+++.+-..             .....+++.+++.+..+
T Consensus       132 p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~-------------~~~~~~~~~~~l~~~g~  198 (230)
T 3evz_A          132 PYYDKPLGRVLTEREAIGGGKYGEEFSVKLLEEAFDHLNPGGKVALYLPD-------------KEKLLNVIKERGIKLGY  198 (230)
T ss_dssp             CCC---------------CCSSSCHHHHHHHHHHGGGEEEEEEEEEEEES-------------CHHHHHHHHHHHHHTTC
T ss_pred             CCcCCccccccChhhhhccCccchHHHHHHHHHHHHHhCCCeEEEEEecc-------------cHhHHHHHHHHHHHcCC
Confidence            21                         23477788889999999876211             11345667777776655


Q ss_pred             c
Q 019199          308 Y  308 (344)
Q Consensus       308 ~  308 (344)
                      .
T Consensus       199 ~  199 (230)
T 3evz_A          199 S  199 (230)
T ss_dssp             E
T ss_pred             c
Confidence            3

>4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli}

Probab=95.95  E-value=0.034  Score=48.05  Aligned_cols=76  Identities=16%  Similarity=0.168  Sum_probs=51.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      ..+.++||+|+ |++|.+.++.+...|++|+++ .++.++.+.+.+   +.+...   ..|-.+.+.+.+.       .+
T Consensus        24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  103 (272)
T 4e3z_A           24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG  103 (272)
T ss_dssp             CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence            45678999998 999999999999999999876 566555444322   334322   2244555444332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus       104 ~id~li~nAg~  114 (272)
T 4e3z_A          104 RLDGLVNNAGI  114 (272)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEECCCC
Confidence            79999998873

>3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0

Probab=95.95  E-value=0.02  Score=49.14  Aligned_cols=74  Identities=20%  Similarity=0.144  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLL---GAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++ .+.+.+..   +..   ...|-.+.+.+.+.       .++
T Consensus         6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~   85 (264)
T 3i4f_A            6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK   85 (264)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence            4578999998 999999999998899999998776554 33332222   222   12355555544332       258


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      +|++|++.|
T Consensus        86 id~lv~~Ag   94 (264)
T 3i4f_A           86 IDFLINNAG   94 (264)
T ss_dssp             CCEEECCCC
T ss_pred             CCEEEECCc
Confidence            999999998

>2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A*

Probab=95.95  E-value=0.037  Score=48.87  Aligned_cols=91  Identities=22%  Similarity=0.191  Sum_probs=63.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHH--HHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc-
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEA--LSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD-  255 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~--~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~-  255 (344)
                      .+|||+|+ |.+|..++..+...|.+|++++++.+ +...+  .+..|... ..|..+.+.+.+.-.++|+||.+.+.. 
T Consensus        12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~~~l~~a~~~~d~vi~~a~~~~   91 (318)
T 2r6j_A           12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEHEKLVELMKKVDVVISALAFPQ   91 (318)
T ss_dssp             CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCHHHHHHHHTTCSEEEECCCGGG
T ss_pred             CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCHHHHHHHHcCCCEEEECCchhh
Confidence            46999998 99999999999888999999998874 33222  12345433 235567777777667899999998742 


Q ss_pred             -hhHHHHHHhcccC---CEEE
Q 019199          256 -HPFDAYMSLLKVA---GVYV  272 (344)
Q Consensus       256 -~~~~~~~~~l~~~---G~iv  272 (344)
                       .....+++.++..   ++++
T Consensus        92 ~~~~~~l~~aa~~~g~v~~~v  112 (318)
T 2r6j_A           92 ILDQFKILEAIKVAGNIKRFL  112 (318)
T ss_dssp             STTHHHHHHHHHHHCCCCEEE
T ss_pred             hHHHHHHHHHHHhcCCCCEEE
Confidence             2245555655443   4676

>2p35_A Trans-aconitate 2-methyltransferase; SAM dependent methyltrans agrobacterium tumefaciens, structural genomics, PSI-2; HET: SAH; 1.95A {Agrobacterium tumefaciens str}

Probab=95.94  E-value=0.021  Score=48.71  Aligned_cols=96  Identities=16%  Similarity=0.068  Sum_probs=65.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-  254 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-  254 (344)
                      ...++.+||-+|+| .|..+..+++.. +.+|++++.+++..+.+.+.......+..+-.+ +. ..+.+|+|+....- 
T Consensus        30 ~~~~~~~vLdiG~G-~G~~~~~l~~~~~~~~v~~~D~s~~~~~~a~~~~~~~~~~~~d~~~-~~-~~~~fD~v~~~~~l~  106 (259)
T 2p35_A           30 PLERVLNGYDLGCG-PGNSTELLTDRYGVNVITGIDSDDDMLEKAADRLPNTNFGKADLAT-WK-PAQKADLLYANAVFQ  106 (259)
T ss_dssp             CCSCCSSEEEETCT-TTHHHHHHHHHHCTTSEEEEESCHHHHHHHHHHSTTSEEEECCTTT-CC-CSSCEEEEEEESCGG
T ss_pred             CCCCCCEEEEecCc-CCHHHHHHHHhCCCCEEEEEECCHHHHHHHHHhCCCcEEEECChhh-cC-ccCCcCEEEEeCchh
Confidence            34788899999986 377777777765 679999999999888885543322222222111 11 23569999865431 


Q ss_pred             -----chhHHHHHHhcccCCEEEEEc
Q 019199          255 -----DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       255 -----~~~~~~~~~~l~~~G~iv~~g  275 (344)
                           ...+..+.+.|+|+|+++...
T Consensus       107 ~~~~~~~~l~~~~~~L~pgG~l~~~~  132 (259)
T 2p35_A          107 WVPDHLAVLSQLMDQLESGGVLAVQM  132 (259)
T ss_dssp             GSTTHHHHHHHHGGGEEEEEEEEEEE
T ss_pred             hCCCHHHHHHHHHHhcCCCeEEEEEe
Confidence                 234677788999999998764

>3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A*

Probab=95.93  E-value=0.042  Score=49.18  Aligned_cols=92  Identities=18%  Similarity=0.216  Sum_probs=63.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc----hhHHHHH--HhCCCcE-EEeCCCHHHHHHhcC--CccEEEEC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST----SKKEEAL--SLLGADK-FVVSSDLEQMKALGK--SLDFIIDT  251 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~----~~~~~~~--~~~g~~~-~v~~~~~~~~~~~~~--~~dvvid~  251 (344)
                      .+|||+|+ |.+|..++..+...|.+|+++++++    ++.+.+.  +..+... ..|..+.+.+.+.-.  ++|+||.+
T Consensus        11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vi~~   90 (346)
T 3i6i_A           11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKEHEIDIVVST   90 (346)
T ss_dssp             CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHHTTCCEEEEC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhhCCCCEEEEC
Confidence            57999998 9999999999988899999999976    3433221  2335433 235556666666555  89999999


Q ss_pred             CCCc--hhHHHHHHhcccCC---EEEE
Q 019199          252 ASGD--HPFDAYMSLLKVAG---VYVL  273 (344)
Q Consensus       252 ~g~~--~~~~~~~~~l~~~G---~iv~  273 (344)
                      .+..  .....+++.++..|   +++.
T Consensus        91 a~~~n~~~~~~l~~aa~~~g~v~~~v~  117 (346)
T 3i6i_A           91 VGGESILDQIALVKAMKAVGTIKRFLP  117 (346)
T ss_dssp             CCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred             CchhhHHHHHHHHHHHHHcCCceEEee
Confidence            8852  23456666665544   6664

>3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium}

Probab=95.93  E-value=0.018  Score=51.18  Aligned_cols=76  Identities=24%  Similarity=0.287  Sum_probs=52.0

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC----------chhHHHHH---HhCCCcEEE---eCCCHHHHHHh
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS----------TSKKEEAL---SLLGADKFV---VSSDLEQMKAL  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~----------~~~~~~~~---~~~g~~~~v---~~~~~~~~~~~  241 (344)
                      -.|.++||+|+ +++|.+.+..+...|++|++++++          .++.+.+.   +..|....+   |-.+.+.+.+.
T Consensus        25 l~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~  104 (322)
T 3qlj_A           25 VDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGL  104 (322)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHH
T ss_pred             cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHH
Confidence            35788999987 999999999888899999999876          44443332   233433322   34454443332


Q ss_pred             -------cCCccEEEECCCC
Q 019199          242 -------GKSLDFIIDTASG  254 (344)
Q Consensus       242 -------~~~~dvvid~~g~  254 (344)
                             .+++|++|++.|.
T Consensus       105 ~~~~~~~~g~iD~lv~nAg~  124 (322)
T 3qlj_A          105 IQTAVETFGGLDVLVNNAGI  124 (322)
T ss_dssp             HHHHHHHHSCCCEEECCCCC
T ss_pred             HHHHHHHcCCCCEEEECCCC
Confidence                   2579999999884

>3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032}

Probab=95.93  E-value=0.06  Score=47.69  Aligned_cols=92  Identities=21%  Similarity=0.187  Sum_probs=63.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCC-----cEEEeCCCHHHHHHh-cCCccEEEECCC-
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGA-----DKFVVSSDLEQMKAL-GKSLDFIIDTAS-  253 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~~~-~~~~dvvid~~g-  253 (344)
                      .+||++|+|. |..+..+++.. +.+|++++-+++-.+.+++.++.     -.++..+..+.+... .+.||+||-... 
T Consensus        91 ~rVLdIG~G~-G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~Da~~~l~~~~~~~fDvIi~D~~~  169 (317)
T 3gjy_A           91 LRITHLGGGA-CTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVDDARMVAESFTPASRDVIIRDVFA  169 (317)
T ss_dssp             CEEEEESCGG-GHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEESCHHHHHHTCCTTCEEEEEECCST
T ss_pred             CEEEEEECCc-CHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEECcHHHHHhhccCCCCCEEEECCCC
Confidence            3899999763 67777888854 67999999999988888776753     123333333444443 367999875321 


Q ss_pred             C---------chhHHHHHHhcccCCEEEEE
Q 019199          254 G---------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       254 ~---------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      .         ...++.+.+.|+++|.++.-
T Consensus       170 ~~~~~~~L~t~efl~~~~r~LkpgGvlv~~  199 (317)
T 3gjy_A          170 GAITPQNFTTVEFFEHCHRGLAPGGLYVAN  199 (317)
T ss_dssp             TSCCCGGGSBHHHHHHHHHHEEEEEEEEEE
T ss_pred             ccccchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            1         23478888999999998755

>3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3}

Probab=95.92  E-value=0.053  Score=46.90  Aligned_cols=89  Identities=11%  Similarity=0.047  Sum_probs=62.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE-EeCCCHHHHHHhcCCccEEEECCCCc----h
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF-VVSSDLEQMKALGKSLDFIIDTASGD----H  256 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~~g~~----~  256 (344)
                      .+|||+|+|.+|..++..+...|.+|+++++++++...+ ...+.+.+ .|..+.+     ..++|+||.+.+..    .
T Consensus         6 ~~ilVtGaG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~-~~~~~~~~~~D~~d~~-----~~~~d~vi~~a~~~~~~~~   79 (286)
T 3ius_A            6 GTLLSFGHGYTARVLSRALAPQGWRIIGTSRNPDQMEAI-RASGAEPLLWPGEEPS-----LDGVTHLLISTAPDSGGDP   79 (286)
T ss_dssp             CEEEEETCCHHHHHHHHHHGGGTCEEEEEESCGGGHHHH-HHTTEEEEESSSSCCC-----CTTCCEEEECCCCBTTBCH
T ss_pred             CcEEEECCcHHHHHHHHHHHHCCCEEEEEEcChhhhhhH-hhCCCeEEEecccccc-----cCCCCEEEECCCccccccH
Confidence            579999999999999999988899999999999887766 34454332 2223322     46799999988743    1


Q ss_pred             hHHHHHHhccc----CCEEEEEcC
Q 019199          257 PFDAYMSLLKV----AGVYVLVGF  276 (344)
Q Consensus       257 ~~~~~~~~l~~----~G~iv~~g~  276 (344)
                      ....+++.++.    -.+++.++.
T Consensus        80 ~~~~l~~a~~~~~~~~~~~v~~Ss  103 (286)
T 3ius_A           80 VLAALGDQIAARAAQFRWVGYLST  103 (286)
T ss_dssp             HHHHHHHHHHHTGGGCSEEEEEEE
T ss_pred             HHHHHHHHHHhhcCCceEEEEeec
Confidence            23455555543    368887764

>3sm3_A SAM-dependent methyltransferases; NESG, structural genomics, PSI-biology, protein structure in northeast structural genomics; 2.20A {Methanosarcina mazei}

Probab=95.91  E-value=0.016  Score=48.45  Aligned_cols=95  Identities=21%  Similarity=0.293  Sum_probs=63.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc----------EEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD----------KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----------~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      +++.+||-+|+|. |..+..+++. |++|++++.+++..+.+++.....          ..+.. +........+.+|+|
T Consensus        29 ~~~~~vLdiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~-d~~~~~~~~~~~D~v  105 (235)
T 3sm3_A           29 QEDDEILDIGCGS-GKISLELASK-GYSVTGIDINSEAIRLAETAARSPGLNQKTGGKAEFKVE-NASSLSFHDSSFDFA  105 (235)
T ss_dssp             CTTCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHTTCCSCCSSSSCEEEEEEC-CTTSCCSCTTCEEEE
T ss_pred             CCCCeEEEECCCC-CHHHHHHHhC-CCeEEEEECCHHHHHHHHHHHHhcCCccccCcceEEEEe-cccccCCCCCceeEE
Confidence            6889999999874 7777777776 889999999998887775443310          11111 111111112569999


Q ss_pred             EECCC-----Cc----hhHHHHHHhcccCCEEEEEcC
Q 019199          249 IDTAS-----GD----HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       249 id~~g-----~~----~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      +-...     .+    ..++.+.+.|+|+|+++....
T Consensus       106 ~~~~~l~~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~  142 (235)
T 3sm3_A          106 VMQAFLTSVPDPKERSRIIKEVFRVLKPGAYLYLVEF  142 (235)
T ss_dssp             EEESCGGGCCCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             EEcchhhcCCCHHHHHHHHHHHHHHcCCCeEEEEEEC
Confidence            85322     21    357888899999999988753

>2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor}

Probab=95.90  E-value=0.015  Score=49.88  Aligned_cols=70  Identities=20%  Similarity=0.132  Sum_probs=50.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      .+.++||+|+ |++|.+.++.+...|++|+++++++++.+.+     .....|..+.+.+.+.       .+++|+++++
T Consensus        20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~-----~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~n   94 (253)
T 2nm0_A           20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEGF-----LAVKCDITDTEQVEQAYKEIEETHGPVEVLIAN   94 (253)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTSHHHHHHHHHHHHHHTCSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhccc-----eEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence            4678999998 9999999999988999999999887654221     0112355565544332       2578999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        95 Ag~   97 (253)
T 2nm0_A           95 AGV   97 (253)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            874

>2i7c_A Spermidine synthase; transferase, structural genomics consor; HET: AAT 1PG; 1.71A {Plasmodium falciparum} PDB: 2hte_A* 3b7p_A* 3rie_A* 2pwp_A*

Probab=95.90  E-value=0.035  Score=48.45  Aligned_cols=96  Identities=17%  Similarity=0.201  Sum_probs=64.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCC--------c-EEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGA--------D-KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~--------~-~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      .++.+||++|+|. |..+..+++..+ .+|++++-+++-.+.+++.+..        . .++..+..+.+....+.+|+|
T Consensus        77 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~I  155 (283)
T 2i7c_A           77 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI  155 (283)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred             CCCCeEEEEeCCc-CHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhccccCCCcEEEEECChHHHHHhCCCCceEE
Confidence            4568999998753 556667777653 5999999999988888665541        1 233333333444445679998


Q ss_pred             EECCCC----------chhHHHHHHhcccCCEEEEEc
Q 019199          249 IDTASG----------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 id~~g~----------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +-....          ...++.+.+.|+++|.++...
T Consensus       156 i~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~~  192 (283)
T 2i7c_A          156 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQC  192 (283)
T ss_dssp             EEECCCTTTGGGGGSSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEEC
Confidence            742211          244778889999999998763

>3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B}

Probab=95.89  E-value=0.024  Score=48.90  Aligned_cols=76  Identities=25%  Similarity=0.209  Sum_probs=50.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe-CCchhHHHHHH---hCCCc---EEEeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS-TSTSKKEEALS---LLGAD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~-~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      ..+.++||+|+ +++|.+.++.+...|++|++++ ++.++.+...+   ..+..   ...|-.+.+.+.+.       .+
T Consensus        23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g  102 (269)
T 3gk3_A           23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG  102 (269)
T ss_dssp             -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence            35678899987 9999999999988999999988 44444333222   23322   12355555544332       25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++|++.|.
T Consensus       103 ~id~li~nAg~  113 (269)
T 3gk3_A          103 KVDVLINNAGI  113 (269)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEECCCc
Confidence            79999999874

>1nvt_A Shikimate 5'-dehydrogenase; structural genomics, PSI, protein structure initiative; HET: NAP; 2.35A {Methanocaldococcus jannaschii} SCOP: c.2.1.7 c.58.1.5

Probab=95.89  E-value=0.018  Score=50.38  Aligned_cols=94  Identities=16%  Similarity=0.078  Sum_probs=61.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---E---EEeCCCHHHHHHhcCCccEEEECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---K---FVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~---~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      -.+.+++|+|+|++|.+++..+...| +|+++.++.++.+.+.++++..   .   .++..+   +.+..+++|++++++
T Consensus       126 l~~k~vlV~GaGgiG~aia~~L~~~G-~V~v~~r~~~~~~~l~~~~~~~~~~~~~~~~d~~~---~~~~~~~~DilVn~a  201 (287)
T 1nvt_A          126 VKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDGVDIIINAT  201 (287)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTTCCEEEECS
T ss_pred             cCCCEEEEECchHHHHHHHHHHHHCC-CEEEEECCHHHHHHHHHHHhhhcccccceeEEEee---HHHhhCCCCEEEECC
Confidence            35789999999999999999998899 9999999988776664444310   0   011111   012236799999999


Q ss_pred             CCchhH-----HH-HHHhcccCCEEEEEcC
Q 019199          253 SGDHPF-----DA-YMSLLKVAGVYVLVGF  276 (344)
Q Consensus       253 g~~~~~-----~~-~~~~l~~~G~iv~~g~  276 (344)
                      +.....     .. ....++++..++++..
T Consensus       202 g~~~~~~~~~~~~~~~~~l~~~~~v~Dv~y  231 (287)
T 1nvt_A          202 PIGMYPNIDVEPIVKAEKLREDMVVMDLIY  231 (287)
T ss_dssp             CTTCTTCCSSCCSSCSTTCCSSSEEEECCC
T ss_pred             CCCCCCCCCCCCCCCHHHcCCCCEEEEeee
Confidence            854310     00 1345667777777654

>1nt2_A Fibrillarin-like PRE-rRNA processing protein; adeMet, binding motif, RNA binding protein; HET: SAM; 2.90A {Archaeoglobus fulgidus} SCOP: c.66.1.3

Probab=95.88  E-value=0.031  Score=46.39  Aligned_cols=97  Identities=12%  Similarity=0.051  Sum_probs=60.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHH---HhCCCcEEEeC--CCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEAL---SLLGADKFVVS--SDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~---~~~g~~~~v~~--~~~~~~~~~~~~~dvvid  250 (344)
                      .+++|++||-+|+|+ |..+..+++..+ .+|++++.+++..+.+.   +.......+..  ..........+.+|+|+.
T Consensus        54 ~~~~g~~VLDlGcGt-G~~~~~la~~~~~~~V~gvD~s~~~l~~~~~~a~~~~~v~~~~~d~~~~~~~~~~~~~fD~V~~  132 (210)
T 1nt2_A           54 KLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ  132 (210)
T ss_dssp             CCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred             CCCCCCEEEEECCcC-CHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHHhcCCCeEEEEcCCCCchhhcccccceeEEEE
Confidence            347899999999864 677778888764 48999999987432221   22221111211  111100112256999987


Q ss_pred             CCCCch----hHHHHHHhcccCCEEEEE
Q 019199          251 TASGDH----PFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~~~----~~~~~~~~l~~~G~iv~~  274 (344)
                      ....+.    .+..+.+.|+|+|+++..
T Consensus       133 ~~~~~~~~~~~l~~~~r~LkpgG~l~i~  160 (210)
T 1nt2_A          133 DIAQKNQIEILKANAEFFLKEKGEVVIM  160 (210)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             eccChhHHHHHHHHHHHHhCCCCEEEEE
Confidence            654432    156788899999999887

>2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18

Probab=95.85  E-value=0.022  Score=49.87  Aligned_cols=99  Identities=19%  Similarity=0.208  Sum_probs=65.5

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC--cEEEeCCCHHHHHHhcCCccEEEEC
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA--DKFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~--~~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      .+.++.+||-+|+| .|..+..+++..|++|++++.+++.++.+++..   |.  ...+...+...+....+.+|+|+..
T Consensus        79 ~~~~~~~vLDiGcG-~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~  157 (297)
T 2o57_A           79 VLQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYDFIWSQ  157 (297)
T ss_dssp             CCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEEEEEEE
T ss_pred             CCCCCCEEEEeCCC-CCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcccCCCCCCCEeEEEec
Confidence            45889999999987 477788888877889999999988776664332   32  1111111111111112569999864


Q ss_pred             CCC------chhHHHHHHhcccCCEEEEEcC
Q 019199          252 ASG------DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       252 ~g~------~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      ..-      ...+..+.+.|+|+|+++....
T Consensus       158 ~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~  188 (297)
T 2o57_A          158 DAFLHSPDKLKVFQECARVLKPRGVMAITDP  188 (297)
T ss_dssp             SCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             chhhhcCCHHHHHHHHHHHcCCCeEEEEEEe
Confidence            331      2347888999999999987754

>1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A*

Probab=95.85  E-value=0.042  Score=49.24  Aligned_cols=75  Identities=16%  Similarity=0.143  Sum_probs=53.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch----hHHHHHHhC------CCcE-EEeCCCHHHHHHhcCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS----KKEEALSLL------GADK-FVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~----~~~~~~~~~------g~~~-~v~~~~~~~~~~~~~~~dv  247 (344)
                      .+.+|||+|+ |.+|..++..+...|.+|++++++..    +...+.+.+      +... ..|..+.+.+.+...++|+
T Consensus        26 ~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~d~  105 (352)
T 1sb8_A           26 QPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNLDDCNNACAGVDY  105 (352)
T ss_dssp             SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSHHHHHHHHTTCSE
T ss_pred             cCCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCHHHHHHHhcCCCE
Confidence            3468999998 99999999999888999999998653    333332222      2221 2245566666666668999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ||.+++.
T Consensus       106 vih~A~~  112 (352)
T 1sb8_A          106 VLHQAAL  112 (352)
T ss_dssp             EEECCSC
T ss_pred             EEECCcc
Confidence            9999884

>1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13

Probab=95.85  E-value=0.036  Score=47.99  Aligned_cols=97  Identities=19%  Similarity=0.208  Sum_probs=67.0

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC----CCc-EEEeCCCHHHHHHh-cCCccE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL----GAD-KFVVSSDLEQMKAL-GKSLDF  247 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~----g~~-~~v~~~~~~~~~~~-~~~~dv  247 (344)
                      ..++++++||-+|+| .|..+..+++..  +.+|++++.+++..+.+++.+    |.+ ..+...+...  .. .+.+|+
T Consensus       106 ~~~~~~~~VLD~G~G-~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v~~~~~d~~~--~~~~~~fD~  182 (275)
T 1yb2_A          106 CGLRPGMDILEVGVG-SGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIAD--FISDQMYDA  182 (275)
T ss_dssp             CCCCTTCEEEEECCT-TSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTTT--CCCSCCEEE
T ss_pred             cCCCCcCEEEEecCC-CCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcEEEEECchhc--cCcCCCccE
Confidence            345889999999987 477778888873  569999999998877664433    422 2222222111  11 246999


Q ss_pred             EEECCCCc-hhHHHHHHhcccCCEEEEEc
Q 019199          248 IIDTASGD-HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       248 vid~~g~~-~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |+-....+ ..+..+.+.|+|+|+++...
T Consensus       183 Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~  211 (275)
T 1yb2_A          183 VIADIPDPWNHVQKIASMMKPGSVATFYL  211 (275)
T ss_dssp             EEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             EEEcCcCHHHHHHHHHHHcCCCCEEEEEe
Confidence            98766543 45889999999999998875

>2pt6_A Spermidine synthase; transferase, structural genomics consor SGC,dcadoMet complex; HET: S4M 1PG; 2.00A {Plasmodium falciparum} PDB: 2pss_A* 2pt9_A*

Probab=95.85  E-value=0.032  Score=49.64  Aligned_cols=95  Identities=17%  Similarity=0.188  Sum_probs=63.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      .++.+||.+|+|. |..+..+++.. +.+|++++-+++-.+.+++.+..         -.++..+..+.+....+.+|+|
T Consensus       115 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDis~~~l~~ar~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fDvI  193 (321)
T 2pt6_A          115 KEPKNVLVVGGGD-GGIIRELCKYKSVENIDICEIDETVIEVSKIYFKNISCGYEDKRVNVFIEDASKFLENVTNTYDVI  193 (321)
T ss_dssp             SSCCEEEEEECTT-CHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCTTTSGGGGSTTEEEEESCHHHHHHHCCSCEEEE
T ss_pred             CCCCEEEEEcCCc-cHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEccHHHHHhhcCCCceEE
Confidence            3568999998753 66677777765 45999999999988888655532         1222222233344345679999


Q ss_pred             EECCCC----------chhHHHHHHhcccCCEEEEE
Q 019199          249 IDTASG----------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       249 id~~g~----------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +-....          ...++.+.+.|+++|.++.-
T Consensus       194 i~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  229 (321)
T 2pt6_A          194 IVDSSDPIGPAETLFNQNFYEKIYNALKPNGYCVAQ  229 (321)
T ss_dssp             EEECCCSSSGGGGGSSHHHHHHHHHHEEEEEEEEEE
T ss_pred             EECCcCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence            843311          24477888999999999875

>3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori}

Probab=95.84  E-value=0.015  Score=52.41  Aligned_cols=75  Identities=13%  Similarity=0.077  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH--CCCeEEEEeCCchhHH----------HHHH--hCCCc-EEEeCCCHHHHHHh-c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKA--FGLNVTVLSTSTSKKE----------EALS--LLGAD-KFVVSSDLEQMKAL-G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~--~g~~V~~~~~~~~~~~----------~~~~--~~g~~-~~v~~~~~~~~~~~-~  242 (344)
                      .+.+|||+|+ |.+|..++..+..  .|++|++++++.....          ....  ..+.. ...|..+.+.+.+. .
T Consensus         9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~   88 (362)
T 3sxp_A            9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNPLDLRRLEK   88 (362)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCHHHHHHHTT
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCHHHHHHhhc
Confidence            4678999998 9999999998888  8999999998654110          0001  11122 22355666777776 6


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      .++|+||++.+.
T Consensus        89 ~~~D~vih~A~~  100 (362)
T 3sxp_A           89 LHFDYLFHQAAV  100 (362)
T ss_dssp             SCCSEEEECCCC
T ss_pred             cCCCEEEECCcc
Confidence            789999999884

>2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A*

Probab=95.84  E-value=0.01  Score=52.87  Aligned_cols=75  Identities=15%  Similarity=0.137  Sum_probs=51.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-Cc-EEEeCCCHHHHHHhcC--CccEEEECCCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-AD-KFVVSSDLEQMKALGK--SLDFIIDTASG  254 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~-~~v~~~~~~~~~~~~~--~~dvvid~~g~  254 (344)
                      .+.+|||+|+ |.+|..+++.+...|.+|++++++........+.+. .. ...|..+.+.+.+...  ++|+||++++.
T Consensus        19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~l~~v~~~~~Dl~d~~~~~~~~~~~~~D~vih~A~~   98 (330)
T 2pzm_A           19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLPPVAGLSVIEGSVTDAGLLERAFDSFKPTHVVHSAAA   98 (330)
T ss_dssp             TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSCSCTTEEEEECCTTCHHHHHHHHHHHCCSEEEECCCC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhhccCCceEEEeeCCCHHHHHHHHhhcCCCEEEECCcc
Confidence            4678999998 999999999988889999999986543221111222 11 1234456655555544  89999999874

>3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A*

Probab=95.83  E-value=0.14  Score=46.07  Aligned_cols=91  Identities=15%  Similarity=0.154  Sum_probs=61.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHC--CCeEE-EEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAF--GLNVT-VLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~--g~~V~-~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      -+|.|+|+|.+|...+..++..  +.+++ +.++++++.+.+.+++|. ..  +.+.+.+-+ ...+|+|+.++......
T Consensus        14 ~rvgiiG~G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~--~~~~~~ll~-~~~~D~V~i~tp~~~h~   89 (354)
T 3q2i_A           14 IRFALVGCGRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RG--HASLTDMLA-QTDADIVILTTPSGLHP   89 (354)
T ss_dssp             EEEEEECCSTTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EE--ESCHHHHHH-HCCCSEEEECSCGGGHH
T ss_pred             ceEEEEcCcHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-ce--eCCHHHHhc-CCCCCEEEECCCcHHHH
Confidence            4688999999998877777665  66766 566777777777677886 33  233332211 15799999999877657


Q ss_pred             HHHHHhcccCCEEEEEcCC
Q 019199          259 DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..+..+++.+ +-+.+..+
T Consensus        90 ~~~~~al~~g-k~v~~EKP  107 (354)
T 3q2i_A           90 TQSIECSEAG-FHVMTEKP  107 (354)
T ss_dssp             HHHHHHHHTT-CEEEECSS
T ss_pred             HHHHHHHHCC-CCEEEeCC
Confidence            7777777765 45555433

>1j4a_A D-LDH, D-lactate dehydrogenase; NAD-dependent dehydrogenase, reversible interconversion of pyruvate INTO D-lactate; 1.90A {Lactobacillus delbrueckii subsp} SCOP: c.2.1.4 c.23.12.1 PDB: 1j49_A* 2dld_A*

Probab=95.83  E-value=0.017  Score=51.69  Aligned_cols=87  Identities=22%  Similarity=0.236  Sum_probs=62.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch-h-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH-P-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~-~-  257 (344)
                      .|.+|.|+|.|.+|...++.++.+|++|++.+++.++.  + ++. +.. .  .+.   .++..+.|+|+.++.... + 
T Consensus       145 ~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~~-~--~~l---~ell~~aDvV~l~~p~~~~t~  214 (333)
T 1j4a_A          145 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPE--L-EKK-GYY-V--DSL---DDLYKQADVISLHVPDVPANV  214 (333)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHH--H-HHT-TCB-C--SCH---HHHHHHCSEEEECSCCCGGGT
T ss_pred             CCCEEEEEccCHHHHHHHHHHHHCCCEEEEECCCcchh--H-Hhh-Cee-c--CCH---HHHHhhCCEEEEcCCCcHHHH
Confidence            57899999999999999999999999999999887654  2 232 221 1  122   222245899999887432 1 


Q ss_pred             --H-HHHHHhcccCCEEEEEcC
Q 019199          258 --F-DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 --~-~~~~~~l~~~G~iv~~g~  276 (344)
                        + ...++.+++++.++.++.
T Consensus       215 ~li~~~~l~~mk~ga~lIn~ar  236 (333)
T 1j4a_A          215 HMINDESIAKMKQDVVIVNVSR  236 (333)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSC
T ss_pred             HHHhHHHHhhCCCCcEEEECCC
Confidence              1 457788999998888863

>4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A*

Probab=95.83  E-value=0.019  Score=51.32  Aligned_cols=91  Identities=13%  Similarity=0.100  Sum_probs=62.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      ..+.+|||+|+ |.+|..+++.+...|.+|+++++++++       .+... ..|..+.+.+.+...++|+||.+.+...
T Consensus        17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~~~~~~~~~~~d~vih~A~~~~   89 (347)
T 4id9_A           17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDGQALSDAIMGVSAVLHLGAFMS   89 (347)
T ss_dssp             ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCHHHHHHHHTTCSEEEECCCCCC
T ss_pred             cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCHHHHHHHHhCCCEEEECCcccC
Confidence            45678999998 999999999999999999999988765       23332 2355666666666678999999886421


Q ss_pred             ---------------hHHHHHHhcccC--CEEEEEcC
Q 019199          257 ---------------PFDAYMSLLKVA--GVYVLVGF  276 (344)
Q Consensus       257 ---------------~~~~~~~~l~~~--G~iv~~g~  276 (344)
                                     ....+++.++..  +++|.++.
T Consensus        90 ~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS  126 (347)
T 4id9_A           90 WAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS  126 (347)
T ss_dssp             SSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred             cchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence                           123344444433  48888765

>3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti}

Probab=95.81  E-value=0.038  Score=49.25  Aligned_cols=74  Identities=16%  Similarity=0.130  Sum_probs=49.9

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC-----chhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS-----TSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------  241 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~-----~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------  241 (344)
                      +.++||+|+ |++|.+.++.+...|++|++++++     .++.+.+.   +..+...   ..|-.+.+.+.+.       
T Consensus         5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~   84 (324)
T 3u9l_A            5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE   84 (324)
T ss_dssp             CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence            578999998 999999999999999999988765     23333332   2234322   2344555444332       


Q ss_pred             cCCccEEEECCCC
Q 019199          242 GKSLDFIIDTASG  254 (344)
Q Consensus       242 ~~~~dvvid~~g~  254 (344)
                      .+++|+++++.|.
T Consensus        85 ~g~iD~lVnnAG~   97 (324)
T 3u9l_A           85 DGRIDVLIHNAGH   97 (324)
T ss_dssp             HSCCSEEEECCCC
T ss_pred             cCCCCEEEECCCc
Confidence            2589999999983

>3l8d_A Methyltransferase; structural genomics, PSI, nysgrc, protein structure initiative, NEW YORK SGX research center for STRU genomics; 1.70A {Bacillus thuringiensis}

Probab=95.81  E-value=0.023  Score=47.95  Aligned_cols=96  Identities=15%  Similarity=0.154  Sum_probs=62.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-CcEEEeCCCHHHHHHhcCCccEEEECCCC---
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASG---  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~dvvid~~g~---  254 (344)
                      .++.+||-+|+|. |..+..+++. |++|++++.+++..+.+.+... ....+...+...+....+.+|+|+....-   
T Consensus        52 ~~~~~vLDiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~l~~~  129 (242)
T 3l8d_A           52 KKEAEVLDVGCGD-GYGTYKLSRT-GYKAVGVDISEVMIQKGKERGEGPDLSFIKGDLSSLPFENEQFEAIMAINSLEWT  129 (242)
T ss_dssp             CTTCEEEEETCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHTTTCBTTEEEEECBTTBCSSCTTCEEEEEEESCTTSS
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHHc-CCeEEEEECCHHHHHHHHhhcccCCceEEEcchhcCCCCCCCccEEEEcChHhhc
Confidence            6889999999863 6667777765 8899999999988888844322 11111111111111113579999864331   


Q ss_pred             ---chhHHHHHHhcccCCEEEEEcC
Q 019199          255 ---DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       255 ---~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                         ...+..+.+.|+|+|+++....
T Consensus       130 ~~~~~~l~~~~~~L~pgG~l~i~~~  154 (242)
T 3l8d_A          130 EEPLRALNEIKRVLKSDGYACIAIL  154 (242)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cCHHHHHHHHHHHhCCCeEEEEEEc
Confidence               1347888899999999987753

>2f1k_A Prephenate dehydrogenase; tyrosine synthesis, X-RA crystallography structure, oxidoreductase; HET: OMT NAP; 1.55A {Synechocystis SP} SCOP: a.100.1.12 c.2.1.6

Probab=95.78  E-value=0.052  Score=47.00  Aligned_cols=85  Identities=20%  Similarity=0.132  Sum_probs=59.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      +|.|+|+|.+|.+.+..+...|.+|++.++++++.+.+ ++.|.. ...  .+.   .+. .++|+||.++.... ...+
T Consensus         2 ~i~iiG~G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~~~~--~~~---~~~-~~~D~vi~av~~~~-~~~~   73 (279)
T 2f1k_A            2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAG--QDL---SLL-QTAKIIFLCTPIQL-ILPT   73 (279)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEE--SCG---GGG-TTCSEEEECSCHHH-HHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HhCCCCcccc--CCH---HHh-CCCCEEEEECCHHH-HHHH
Confidence            57899999999999998888899999999998888877 466753 222  111   123 56899999988643 4444


Q ss_pred             HH----hcccCCEEEEEc
Q 019199          262 MS----LLKVAGVYVLVG  275 (344)
Q Consensus       262 ~~----~l~~~G~iv~~g  275 (344)
                      ++    .++++..++.++
T Consensus        74 ~~~l~~~~~~~~~vv~~~   91 (279)
T 2f1k_A           74 LEKLIPHLSPTAIVTDVA   91 (279)
T ss_dssp             HHHHGGGSCTTCEEEECC
T ss_pred             HHHHHhhCCCCCEEEECC
Confidence            44    344556666653

>2uyy_A N-PAC protein; long-chain dehydrogenase, cytokine; HET: NA7; 2.5A {Homo sapiens}

Probab=95.78  E-value=0.062  Score=47.53  Aligned_cols=87  Identities=21%  Similarity=0.213  Sum_probs=60.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      .+|.|+|+|.+|...+..+...|.+|++.++++++.+.+ .+.|...   ..+...   ...++|+||.++..+.....+
T Consensus        31 ~~I~iIG~G~mG~~~a~~l~~~g~~V~~~~~~~~~~~~~-~~~g~~~---~~~~~~---~~~~~DvVi~av~~~~~~~~v  103 (316)
T 2uyy_A           31 KKIGFLGLGLMGSGIVSNLLKMGHTVTVWNRTAEKCDLF-IQEGARL---GRTPAE---VVSTCDITFACVSDPKAAKDL  103 (316)
T ss_dssp             SCEEEECCSHHHHHHHHHHHHTTCCEEEECSSGGGGHHH-HHTTCEE---CSCHHH---HHHHCSEEEECCSSHHHHHHH
T ss_pred             CeEEEEcccHHHHHHHHHHHhCCCEEEEEeCCHHHHHHH-HHcCCEE---cCCHHH---HHhcCCEEEEeCCCHHHHHHH
Confidence            469999999999998888888899999999998888777 4566431   222211   113489999998865446665


Q ss_pred             HH-------hcccCCEEEEEc
Q 019199          262 MS-------LLKVAGVYVLVG  275 (344)
Q Consensus       262 ~~-------~l~~~G~iv~~g  275 (344)
                      +.       .++++..++.++
T Consensus       104 ~~~~~~~~~~l~~~~~vv~~s  124 (316)
T 2uyy_A          104 VLGPSGVLQGIRPGKCYVDMS  124 (316)
T ss_dssp             HHSTTCGGGGCCTTCEEEECS
T ss_pred             HcCchhHhhcCCCCCEEEECC
Confidence            53       345566666554

>3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus}

Probab=95.78  E-value=0.074  Score=44.81  Aligned_cols=96  Identities=17%  Similarity=0.102  Sum_probs=64.0

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-cCCccEEEECC---
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-GKSLDFIIDTA---  252 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-~~~~dvvid~~---  252 (344)
                      .++++.+||-+|+|. |..+..+++. |++|+.++.+++..+.+.+.   ...+..+..+..... .+.+|+|+...   
T Consensus        38 ~~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~gvD~s~~~~~~a~~~---~~~~~~d~~~~~~~~~~~~fD~i~~~~~l~  112 (240)
T 3dli_A           38 YFKGCRRVLDIGCGR-GEFLELCKEE-GIESIGVDINEDMIKFCEGK---FNVVKSDAIEYLKSLPDKYLDGVMISHFVE  112 (240)
T ss_dssp             GTTTCSCEEEETCTT-THHHHHHHHH-TCCEEEECSCHHHHHHHHTT---SEEECSCHHHHHHTSCTTCBSEEEEESCGG
T ss_pred             hhcCCCeEEEEeCCC-CHHHHHHHhC-CCcEEEEECCHHHHHHHHhh---cceeeccHHHHhhhcCCCCeeEEEECCchh
Confidence            347889999999863 5556666665 88999999999888887433   223332222322232 36799998632   


Q ss_pred             --CC---chhHHHHHHhcccCCEEEEEcCC
Q 019199          253 --SG---DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       253 --g~---~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        ..   ...+..+.+.|+|+|+++.....
T Consensus       113 ~~~~~~~~~~l~~~~~~LkpgG~l~~~~~~  142 (240)
T 3dli_A          113 HLDPERLFELLSLCYSKMKYSSYIVIESPN  142 (240)
T ss_dssp             GSCGGGHHHHHHHHHHHBCTTCCEEEEEEC
T ss_pred             hCCcHHHHHHHHHHHHHcCCCcEEEEEeCC
Confidence              21   23477888899999999876433

>3gvx_A Glycerate dehydrogenase related protein; NYSGXRC, PSI-II, 11143J, structural genomics, protein structure initiative; 2.20A {Thermoplasma acidophilum}

Probab=95.77  E-value=0.0082  Score=52.62  Aligned_cols=86  Identities=24%  Similarity=0.359  Sum_probs=61.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~  257 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.+++.++.+.      ..   ...+.+   ++....|+|+-++.. +.+
T Consensus       120 l~g~tvGIIGlG~IG~~vA~~l~~~G~~V~~~dr~~~~~~~------~~---~~~~l~---ell~~aDiV~l~~P~t~~t  187 (290)
T 3gvx_A          120 LYGKALGILGYGGIGRRVAHLAKAFGMRVIAYTRSSVDQNV------DV---ISESPA---DLFRQSDFVLIAIPLTDKT  187 (290)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHHTCEEEEECSSCCCTTC------SE---ECSSHH---HHHHHCSEEEECCCCCTTT
T ss_pred             eecchheeeccCchhHHHHHHHHhhCcEEEEEecccccccc------cc---ccCChH---HHhhccCeEEEEeeccccc
Confidence            35789999999999999999999999999999987654321      11   111222   222348999887773 221


Q ss_pred             ----HHHHHHhcccCCEEEEEcC
Q 019199          258 ----FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g~  276 (344)
                          -...++.++++..++.++-
T Consensus       188 ~~li~~~~l~~mk~gailIN~aR  210 (290)
T 3gvx_A          188 RGMVNSRLLANARKNLTIVNVAR  210 (290)
T ss_dssp             TTCBSHHHHTTCCTTCEEEECSC
T ss_pred             hhhhhHHHHhhhhcCceEEEeeh
Confidence                2567888999999988863

>1zud_1 Adenylyltransferase THIF; thiamin, thiazole, protein-protein complex, THIF, TRAN biosynthetic protein complex; 1.98A {Escherichia coli} PDB: 1zfn_A* 1zkm_A

Probab=95.76  E-value=0.026  Score=48.32  Aligned_cols=77  Identities=19%  Similarity=0.270  Sum_probs=49.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc-------------------hhHHHHHHh---CC-CcEE--EeC-C
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST-------------------SKKEEALSL---LG-ADKF--VVS-S  233 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~-------------------~~~~~~~~~---~g-~~~~--v~~-~  233 (344)
                      +.+|+|+|+|++|..++..+...|. ++++++...                   .|.+.+.+.   +. ...+  ++. -
T Consensus        28 ~~~VlvvG~GglG~~va~~La~~Gvg~i~lvD~d~v~~sNL~Rq~l~~~~diG~~Ka~~~~~~l~~~np~~~v~~~~~~~  107 (251)
T 1zud_1           28 DSQVLIIGLGGLGTPAALYLAGAGVGTLVLADDDDVHLSNLQRQILFTTEDIDRPKSQVSQQRLTQLNPDIQLTALQQRL  107 (251)
T ss_dssp             TCEEEEECCSTTHHHHHHHHHHTTCSEEEEECCCBCCGGGTTTCTTCCGGGTTSBHHHHHHHHHHHHCTTSEEEEECSCC
T ss_pred             cCcEEEEccCHHHHHHHHHHHHcCCCeEEEEeCCCcccccCCCCccCChhhCCCHHHHHHHHHHHHHCCCCEEEEEeccC
Confidence            4789999999999999999999998 788876542                   233333222   22 1111  111 1


Q ss_pred             CHHHHHHhcCCccEEEECCCCchh
Q 019199          234 DLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       234 ~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      +.+...+...++|+|++++.+..+
T Consensus       108 ~~~~~~~~~~~~DvVi~~~d~~~~  131 (251)
T 1zud_1          108 TGEALKDAVARADVVLDCTDNMAT  131 (251)
T ss_dssp             CHHHHHHHHHHCSEEEECCSSHHH
T ss_pred             CHHHHHHHHhcCCEEEECCCCHHH
Confidence            233344444579999999987663

>3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A*

Probab=95.76  E-value=0.039  Score=48.67  Aligned_cols=96  Identities=14%  Similarity=0.183  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC--------C-cEEEeCCCHHHHHH-hcCCccE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG--------A-DKFVVSSDLEQMKA-LGKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g--------~-~~~v~~~~~~~~~~-~~~~~dv  247 (344)
                      .++.+||++|+|. |..+..+++..+ .+|++++-+++-.+.+++.+.        . -.++..+..+.... ..+.+|+
T Consensus        94 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~D~~~~~~~~~~~~fDv  172 (304)
T 3bwc_A           94 PKPERVLIIGGGD-GGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVGDGLAFVRQTPDNTYDV  172 (304)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHSSCTTCEEE
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEECcHHHHHHhccCCceeE
Confidence            5678999998763 666777777654 599999999888777755441        1 12232222233332 2467999


Q ss_pred             EEECCCC----------chhHHHHHHhcccCCEEEEEc
Q 019199          248 IIDTASG----------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       248 vid~~g~----------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |+-....          ...++.+.+.|+|+|+++...
T Consensus       173 Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~  210 (304)
T 3bwc_A          173 VIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG  210 (304)
T ss_dssp             EEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence            9853321          244778889999999998764

>1zx0_A Guanidinoacetate N-methyltransferase; structural genomics, structural genomics consortium; HET: SAH; 1.86A {Homo sapiens} PDB: 3orh_A* 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A*

Probab=95.75  E-value=0.017  Score=48.79  Aligned_cols=97  Identities=16%  Similarity=0.077  Sum_probs=62.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHH-HHh-cCCccEEEE-CC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQM-KAL-GKSLDFIID-TA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~-~~~-~~~~dvvid-~~  252 (344)
                      +++.+||-+|+|. |..+..+++....+|+.++.+++.++.+++..   +....+...+...+ ... .+.||+|+. +.
T Consensus        59 ~~~~~vLDiGcGt-G~~~~~l~~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~V~~d~~  137 (236)
T 1zx0_A           59 SKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  137 (236)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             CCCCeEEEEeccC-CHHHHHHHhcCCCeEEEEcCCHHHHHHHHHHHHhcCCCeEEEecCHHHhhcccCCCceEEEEECCc
Confidence            6888999999863 66666775543348999999999887775443   22222222333322 122 257999987 33


Q ss_pred             C----Cc------hhHHHHHHhcccCCEEEEEcC
Q 019199          253 S----GD------HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       253 g----~~------~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      .    ..      ..+..+.+.|+|+|+++.+..
T Consensus       138 ~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~  171 (236)
T 1zx0_A          138 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCNL  171 (236)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECCH
T ss_pred             ccchhhhhhhhHHHHHHHHHHhcCCCeEEEEEec
Confidence            2    11      126778899999999987743

>3kkz_A Uncharacterized protein Q5LES9; putative methyltransferase, BFR250, NESG, structural genomics, PSI-2; HET: SAM; 1.68A {Bacteroides fragilis nctc 9343} PDB: 3e7p_A 3t7s_A* 3t7r_A* 3t7t_A*

Probab=95.75  E-value=0.016  Score=49.83  Aligned_cols=105  Identities=13%  Similarity=0.095  Sum_probs=67.8

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc--EEEeCCCHHHHHHhcCCc
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD--KFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~--~~v~~~~~~~~~~~~~~~  245 (344)
                      .+.....+.++.+||-+|+|. |..+..+++..+++|++++.+++..+.+++.   .|..  ..+...+...+....+.+
T Consensus        37 ~l~~l~~~~~~~~vLDiGcG~-G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~d~~~~~~~~~~f  115 (267)
T 3kkz_A           37 ALSFIDNLTEKSLIADIGCGT-GGQTMVLAGHVTGQVTGLDFLSGFIDIFNRNARQSGLQNRVTGIVGSMDDLPFRNEEL  115 (267)
T ss_dssp             HHTTCCCCCTTCEEEEETCTT-CHHHHHHHTTCSSEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEECCTTSCCCCTTCE
T ss_pred             HHHhcccCCCCCEEEEeCCCC-CHHHHHHHhccCCEEEEEeCCHHHHHHHHHHHHHcCCCcCcEEEEcChhhCCCCCCCE
Confidence            344444458899999999874 7888888888556999999998877666433   2321  112111111111112569


Q ss_pred             cEEEECCC-----CchhHHHHHHhcccCCEEEEEcC
Q 019199          246 DFIIDTAS-----GDHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       246 dvvid~~g-----~~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      |+|+....     -...+..+.+.|+|+|+++....
T Consensus       116 D~i~~~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~  151 (267)
T 3kkz_A          116 DLIWSEGAIYNIGFERGLNEWRKYLKKGGYLAVSEC  151 (267)
T ss_dssp             EEEEESSCGGGTCHHHHHHHHGGGEEEEEEEEEEEE
T ss_pred             EEEEEcCCceecCHHHHHHHHHHHcCCCCEEEEEEe
Confidence            99986432     23347788889999999987753

>3bkw_A MLL3908 protein, S-adenosylmethionine dependent methyltransferase; NP_104914.1; HET: MSE; 1.60A {Mesorhizobium loti}

Probab=95.74  E-value=0.042  Score=46.23  Aligned_cols=102  Identities=17%  Similarity=0.104  Sum_probs=65.1

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEE
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      +.......++.+||-+|+|. |..+..+++. |. +|++++.+++..+.+++..... ..+...+........+.+|+|+
T Consensus        35 l~~~~~~~~~~~vLdiG~G~-G~~~~~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~  112 (243)
T 3bkw_A           35 LRAMLPEVGGLRIVDLGCGF-GWFCRWAHEH-GASYVLGLDLSEKMLARARAAGPDTGITYERADLDKLHLPQDSFDLAY  112 (243)
T ss_dssp             HHHHSCCCTTCEEEEETCTT-CHHHHHHHHT-TCSEEEEEESCHHHHHHHHHTSCSSSEEEEECCGGGCCCCTTCEEEEE
T ss_pred             HHHhccccCCCEEEEEcCcC-CHHHHHHHHC-CCCeEEEEcCCHHHHHHHHHhcccCCceEEEcChhhccCCCCCceEEE
Confidence            33333336889999999864 6666677765 77 9999999999888885444321 1111122111111125699998


Q ss_pred             ECCCC------chhHHHHHHhcccCCEEEEEc
Q 019199          250 DTASG------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       250 d~~g~------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ....-      ...++.+.+.|+|+|+++...
T Consensus       113 ~~~~l~~~~~~~~~l~~~~~~L~pgG~l~~~~  144 (243)
T 3bkw_A          113 SSLALHYVEDVARLFRTVHQALSPGGHFVFST  144 (243)
T ss_dssp             EESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeccccccchHHHHHHHHHHhcCcCcEEEEEe
Confidence            64331      234778888999999998764

>1mx3_A CTBP1, C-terminal binding protein 1; nuclear protein, phosphorylation, transcriptional corepresso transcription repressor; HET: NAD; 1.95A {Homo sapiens} SCOP: c.2.1.4 c.23.12.1 PDB: 1hku_A* 1hl3_A* 2hu2_A* 3ga0_A 2ome_A*

Probab=95.73  E-value=0.018  Score=51.82  Aligned_cols=90  Identities=27%  Similarity=0.339  Sum_probs=62.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc-h-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD-H-  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~-~-  256 (344)
                      -.|.+|.|+|.|.+|...++.++.+|.+|++.++..++. .. +.+|+..+   .+.+   ++....|+|+.++... . 
T Consensus       166 l~g~tvGIIG~G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~-~~~g~~~~---~~l~---ell~~aDvV~l~~P~t~~t  237 (347)
T 1mx3_A          166 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDG-VE-RALGLQRV---STLQ---DLLFHSDCVTLHCGLNEHN  237 (347)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTT-HH-HHHTCEEC---SSHH---HHHHHCSEEEECCCCCTTC
T ss_pred             CCCCEEEEEeECHHHHHHHHHHHHCCCEEEEECCCcchh-hH-hhcCCeec---CCHH---HHHhcCCEEEEcCCCCHHH
Confidence            367899999999999999999999999999998776542 22 35565321   1222   2223488888877542 1 


Q ss_pred             --hH-HHHHHhcccCCEEEEEcC
Q 019199          257 --PF-DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 --~~-~~~~~~l~~~G~iv~~g~  276 (344)
                        .+ ...++.++++..++.++.
T Consensus       238 ~~li~~~~l~~mk~gailIN~ar  260 (347)
T 1mx3_A          238 HHLINDFTVKQMRQGAFLVNTAR  260 (347)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSC
T ss_pred             HHHhHHHHHhcCCCCCEEEECCC
Confidence              12 566778888888887763

>3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei}

Probab=95.73  E-value=0.011  Score=53.51  Aligned_cols=74  Identities=18%  Similarity=0.106  Sum_probs=53.5

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEE-EeCC-CHHHHHHhcCCccEEEECCCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKF-VVSS-DLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~-v~~~-~~~~~~~~~~~~dvvid~~g~  254 (344)
                      +.+|||+|+ |.+|..++..+... |.+|++++++.++...+.+..+...+ .|.. +.+.+.+...++|+||.+.+.
T Consensus        24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~~~d~Vih~A~~  101 (372)
T 3slg_A           24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVKKCDVILPLVAI  101 (372)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHHHCSEEEECBCC
T ss_pred             CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhccCCEEEEcCcc
Confidence            468999998 99999999988777 89999999988766544222233222 2445 566666555689999998874

>3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV}

Probab=95.71  E-value=0.04  Score=50.70  Aligned_cols=80  Identities=13%  Similarity=0.062  Sum_probs=52.7

Q ss_pred             ccCC-CCCCEEEEECC-ChHHHHHHHHHHH-CCCeEEEEeCCchhH---------------HHHHHhCCCcEE---EeCC
Q 019199          175 HKMN-QPGKSLGVIGL-GGLGHMAVKFGKA-FGLNVTVLSTSTSKK---------------EEALSLLGADKF---VVSS  233 (344)
Q Consensus       175 ~~~~-~~g~~vlI~Ga-g~~G~~ai~~a~~-~g~~V~~~~~~~~~~---------------~~~~~~~g~~~~---v~~~  233 (344)
                      ...+ +.++++||+|+ +++|++.+..+.. .|++|++++++.+..               ....+..|....   .|-.
T Consensus        54 ~~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~~~G~~a~~i~~Dvt  133 (422)
T 3s8m_A           54 RGVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAKAAGLYSKSINGDAF  133 (422)
T ss_dssp             TCCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHHHTTCCEEEEESCTT
T ss_pred             ccccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHHhcCCcEEEEEecCC
Confidence            3344 46788899998 8999998877777 899999988765421               122245664322   2445


Q ss_pred             CHHHHHH-------hc-CCccEEEECCCC
Q 019199          234 DLEQMKA-------LG-KSLDFIIDTASG  254 (344)
Q Consensus       234 ~~~~~~~-------~~-~~~dvvid~~g~  254 (344)
                      +.+.+.+       .- +++|+++++.|.
T Consensus       134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~  162 (422)
T 3s8m_A          134 SDAARAQVIELIKTEMGGQVDLVVYSLAS  162 (422)
T ss_dssp             SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred             CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence            5443322       23 679999998875

>1yqg_A Pyrroline-5-carboxylate reductase; structural genomics, PSI, structure initiative, midwest center for structural genomic oxidoreductase; 1.90A {Neisseria meningitidis} SCOP: a.100.1.10 c.2.1.6 PDB: 2ag8_A*

Probab=95.71  E-value=0.071  Score=45.66  Aligned_cols=76  Identities=16%  Similarity=0.163  Sum_probs=53.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      +|.|+|+|.+|.+.+..+...| .+|++.++++++.+.+.+.+|....-+..      +.. ++|+||-++. +.....+
T Consensus         2 ~i~iiG~G~mG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~~~~g~~~~~~~~------~~~-~~D~vi~~v~-~~~~~~v   73 (263)
T 1yqg_A            2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETSATLP------ELH-SDDVLILAVK-PQDMEAA   73 (263)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEESSCC------CCC-TTSEEEECSC-HHHHHHH
T ss_pred             EEEEECchHHHHHHHHHHHHCCCCeEEEECCCHHHHHHHHHhcCCEEeCCHH------HHh-cCCEEEEEeC-chhHHHH
Confidence            5788999999999888887788 89999999998888775556754221111      122 5788887777 4446666


Q ss_pred             HHhcc
Q 019199          262 MSLLK  266 (344)
Q Consensus       262 ~~~l~  266 (344)
                      ++.+.
T Consensus        74 ~~~l~   78 (263)
T 1yqg_A           74 CKNIR   78 (263)
T ss_dssp             HTTCC
T ss_pred             HHHhc
Confidence            66554

>2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A*

Probab=95.71  E-value=0.049  Score=49.38  Aligned_cols=98  Identities=19%  Similarity=0.122  Sum_probs=63.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEE--EeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKF--VVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~--v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      .+.+|||+|+ |.+|..++..+...| .+|++++++.++.....+....-..  .|..+.+.+.+...++|+||.+++..
T Consensus        31 ~~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~l~~~~~v~~~~~Dl~d~~~l~~~~~~~d~Vih~A~~~  110 (377)
T 2q1s_A           31 ANTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEKINVPDHPAVRFSETSITDDALLASLQDEYDYVFHLATYH  110 (377)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCGGGSCCCTTEEEECSCTTCHHHHHHCCSCCSEEEECCCCS
T ss_pred             CCCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCchhhccCCCceEEEECCCCCHHHHHHHhhCCCEEEECCCcc
Confidence            3568999998 999999999998899 8999999876542211010111112  24456666776667899999998853


Q ss_pred             h-----------------hHHHHHHhcccC---CEEEEEcCC
Q 019199          256 H-----------------PFDAYMSLLKVA---GVYVLVGFP  277 (344)
Q Consensus       256 ~-----------------~~~~~~~~l~~~---G~iv~~g~~  277 (344)
                      .                 ....+++.++..   +++|.++..
T Consensus       111 ~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~~V~~SS~  152 (377)
T 2q1s_A          111 GNQSSIHDPLADHENNTLTTLKLYERLKHFKRLKKVVYSAAG  152 (377)
T ss_dssp             CHHHHHHCHHHHHHHHTHHHHHHHHHHTTCSSCCEEEEEEEC
T ss_pred             CchhhhhCHHHHHHHHHHHHHHHHHHHHHhCCCCeEEEeCCH
Confidence            1                 123444555443   588877643

>1dxy_A D-2-hydroxyisocaproate dehydrogenase; D-2-hydroxycarboxylate dehydrogenase, D-lactate dehydrogenas oxidoreductase; HET: NAD; 1.86A {Lactobacillus casei} SCOP: c.2.1.4 c.23.12.1

Probab=95.71  E-value=0.025  Score=50.63  Aligned_cols=88  Identities=27%  Similarity=0.335  Sum_probs=63.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP-  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~-  257 (344)
                      -.|.+|.|+|.|.+|...++.++.+|++|++.+++.++.  + +.. ..    ..+.+   ++....|+|+.++..... 
T Consensus       143 l~g~~vgIiG~G~IG~~~A~~l~~~G~~V~~~d~~~~~~--~-~~~-~~----~~~l~---ell~~aDvV~~~~P~~~~t  211 (333)
T 1dxy_A          143 LGQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKG--D-HPD-FD----YVSLE---DLFKQSDVIDLHVPGIEQN  211 (333)
T ss_dssp             GGGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSS--C-CTT-CE----ECCHH---HHHHHCSEEEECCCCCGGG
T ss_pred             CCCCEEEEECcCHHHHHHHHHHHHCCCEEEEECCCcchh--h-Hhc-cc----cCCHH---HHHhcCCEEEEcCCCchhH
Confidence            357899999999999999999999999999999876543  2 121 21    12222   222458999998874321 


Q ss_pred             ---H-HHHHHhcccCCEEEEEcCC
Q 019199          258 ---F-DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       258 ---~-~~~~~~l~~~G~iv~~g~~  277 (344)
                         + ...++.+++++.++.++..
T Consensus       212 ~~li~~~~l~~mk~ga~lIn~srg  235 (333)
T 1dxy_A          212 THIINEAAFNLMKPGAIVINTARP  235 (333)
T ss_dssp             TTSBCHHHHHHSCTTEEEEECSCT
T ss_pred             HHHhCHHHHhhCCCCcEEEECCCC
Confidence               2 4678899999999988643

>1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2

Probab=95.71  E-value=0.014  Score=50.24  Aligned_cols=76  Identities=16%  Similarity=0.119  Sum_probs=50.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHH--HhCCCcE---EEeCCCHHHHHHh-------c
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFG---LNVTVLSTSTSKKEEAL--SLLGADK---FVVSSDLEQMKAL-------G  242 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g---~~V~~~~~~~~~~~~~~--~~~g~~~---~v~~~~~~~~~~~-------~  242 (344)
                      -.+.++||+|+ |++|.++++.+...|   ++|++++++.++.+.+.  ...+...   ..|-.+.+.+.+.       .
T Consensus        19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~   98 (267)
T 1sny_A           19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVT   98 (267)
T ss_dssp             -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHH
T ss_pred             CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHHHhhccCCceEEEEecCCChHHHHHHHHHHHHhc
Confidence            45678999998 999999999998889   89999999876543331  1113221   2244444333222       1


Q ss_pred             C--CccEEEECCCC
Q 019199          243 K--SLDFIIDTASG  254 (344)
Q Consensus       243 ~--~~dvvid~~g~  254 (344)
                      +  ++|++|++.|.
T Consensus        99 g~~~id~li~~Ag~  112 (267)
T 1sny_A           99 KDQGLNVLFNNAGI  112 (267)
T ss_dssp             GGGCCSEEEECCCC
T ss_pred             CCCCccEEEECCCc
Confidence            2  69999999874

>1vl5_A Unknown conserved protein BH2331; putative methyltransferase, structural genomics, joint cente structural genomics, JCSG; HET: MSE; 1.95A {Bacillus halodurans} SCOP: c.66.1.41

Probab=95.71  E-value=0.016  Score=49.68  Aligned_cols=96  Identities=19%  Similarity=0.200  Sum_probs=62.6

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC-cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA-DKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .+++.+||-+|+| .|..+..+++.. .+|++++.+++.++.+++..   |. ...+...+...+....+.+|+|+....
T Consensus        35 ~~~~~~vLDiGcG-~G~~~~~l~~~~-~~v~gvD~s~~~l~~a~~~~~~~~~~~v~~~~~d~~~l~~~~~~fD~V~~~~~  112 (260)
T 1vl5_A           35 LKGNEEVLDVATG-GGHVANAFAPFV-KKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAEQMPFTDERFHIVTCRIA  112 (260)
T ss_dssp             CCSCCEEEEETCT-TCHHHHHHGGGS-SEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC-CCCSCTTCEEEEEEESC
T ss_pred             CCCCCEEEEEeCC-CCHHHHHHHHhC-CEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEecHHhCCCCCCCEEEEEEhhh
Confidence            4788999999987 477777777654 59999999998777764332   31 111111111111111257999987543


Q ss_pred             C------chhHHHHHHhcccCCEEEEEc
Q 019199          254 G------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       254 ~------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      -      ...+.++.+.|+|+|+++...
T Consensus       113 l~~~~d~~~~l~~~~r~LkpgG~l~~~~  140 (260)
T 1vl5_A          113 AHHFPNPASFVSEAYRVLKKGGQLLLVD  140 (260)
T ss_dssp             GGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hHhcCCHHHHHHHHHHHcCCCCEEEEEE
Confidence            2      245788899999999998864

>3e23_A Uncharacterized protein RPA2492; alpha-beta protein, structural genomics, PSI-2, protein structure initiative; HET: SAM; 1.60A {Rhodopseudomonas palustris}

Probab=95.70  E-value=0.016  Score=47.82  Aligned_cols=94  Identities=20%  Similarity=0.148  Sum_probs=63.9

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC---
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG---  254 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~---  254 (344)
                      +.++.+||-+|+|. |..+..+++. |.+|++++.+++.++.+.+.++...+. . +...+. ..+.+|+|+....-   
T Consensus        41 ~~~~~~vLDiGcG~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~-~-d~~~~~-~~~~fD~v~~~~~l~~~  115 (211)
T 3e23_A           41 LPAGAKILELGCGA-GYQAEAMLAA-GFDVDATDGSPELAAEASRRLGRPVRT-M-LFHQLD-AIDAYDAVWAHACLLHV  115 (211)
T ss_dssp             SCTTCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHTSCCEE-C-CGGGCC-CCSCEEEEEECSCGGGS
T ss_pred             cCCCCcEEEECCCC-CHHHHHHHHc-CCeEEEECCCHHHHHHHHHhcCCceEE-e-eeccCC-CCCcEEEEEecCchhhc
Confidence            46788999999863 6666777765 889999999998888886555543221 1 111111 24679999865421   


Q ss_pred             -----chhHHHHHHhcccCCEEEEEcC
Q 019199          255 -----DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       255 -----~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                           ...+..+.+.|+|+|+++..-.
T Consensus       116 ~~~~~~~~l~~~~~~LkpgG~l~~~~~  142 (211)
T 3e23_A          116 PRDELADVLKLIWRALKPGGLFYASYK  142 (211)
T ss_dssp             CHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             CHHHHHHHHHHHHHhcCCCcEEEEEEc
Confidence                 1346788889999999987743

>3g5t_A Trans-aconitate 3-methyltransferase; structural genomics, protein structure initiative, PSI, center for eukaryotic structural genomics; HET: MSE SAH T8N; 1.12A {Saccharomyces cerevisiae}

Probab=95.69  E-value=0.046  Score=47.87  Aligned_cols=96  Identities=17%  Similarity=0.164  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC------CCcEEEeCCCHHHHHHhc------CC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL------GADKFVVSSDLEQMKALG------KS  244 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~------g~~~~v~~~~~~~~~~~~------~~  244 (344)
                      .++.+||-+|+| .|..+..+++..  +.+|++++.++...+.+.+..      .....+...+...+....      +.
T Consensus        35 ~~~~~vLDiGcG-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~v~~~~~d~~~~~~~~~~~~~~~~  113 (299)
T 3g5t_A           35 GERKLLVDVGCG-PGTATLQMAQELKPFEQIIGSDLSATMIKTAEVIKEGSPDTYKNVSFKISSSDDFKFLGADSVDKQK  113 (299)
T ss_dssp             SCCSEEEEETCT-TTHHHHHHHHHSSCCSEEEEEESCHHHHHHHHHHHHHCC-CCTTEEEEECCTTCCGGGCTTTTTSSC
T ss_pred             CCCCEEEEECCC-CCHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHhccCCCCceEEEEcCHHhCCccccccccCCC
Confidence            688999999987 488888999865  669999999998777774331      222212111111111112      57


Q ss_pred             ccEEEECCCC-----chhHHHHHHhcccCCEEEEEc
Q 019199          245 LDFIIDTASG-----DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       245 ~dvvid~~g~-----~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +|+|+....-     ...+..+.+.|+|+|+++...
T Consensus       114 fD~V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~i~~  149 (299)
T 3g5t_A          114 IDMITAVECAHWFDFEKFQRSAYANLRKDGTIAIWG  149 (299)
T ss_dssp             EEEEEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeEEeHhhHHHHhCHHHHHHHHHHhcCCCcEEEEEe
Confidence            9999865431     335788889999999998754

>1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A*

Probab=95.69  E-value=0.034  Score=47.63  Aligned_cols=75  Identities=16%  Similarity=0.072  Sum_probs=51.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHHh------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKA---FGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKAL------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~---~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~~------  241 (344)
                      .+.++||+|+ |++|.+.+..+..   .|++|+++++++++.+.+.+++     +...   ..|-.+++.+.+.      
T Consensus         5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~   84 (259)
T 1oaa_A            5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence            3567899987 9999998888877   8999999999988766554443     3221   2355555443322      


Q ss_pred             ---cCCcc--EEEECCCC
Q 019199          242 ---GKSLD--FIIDTASG  254 (344)
Q Consensus       242 ---~~~~d--vvid~~g~  254 (344)
                         .+++|  +++++.|.
T Consensus        85 ~~~~g~~d~~~lvnnAg~  102 (259)
T 1oaa_A           85 LPRPEGLQRLLLINNAAT  102 (259)
T ss_dssp             SCCCTTCCEEEEEECCCC
T ss_pred             ccccccCCccEEEECCcc
Confidence               13578  99998873

>1uir_A Polyamine aminopropyltransferase; spermidien synthase, spermine synthase, riken STR genomics/proteomics initiative, RSGI; 2.00A {Thermus thermophilus} SCOP: c.66.1.17 PDB: 3anx_A*

Probab=95.67  E-value=0.045  Score=48.49  Aligned_cols=95  Identities=14%  Similarity=0.096  Sum_probs=63.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC---------C-cEEEeCCCHHHHHHhcCCccE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG---------A-DKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g---------~-~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      ..+.+||++|+|. |..+..+++..+ .+|++++.+++-.+.+++.+.         . -.++..+..+.+....+.+|+
T Consensus        76 ~~~~~VLdiG~G~-G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~~~v~~~~~D~~~~l~~~~~~fD~  154 (314)
T 1uir_A           76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV  154 (314)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred             CCCCeEEEEcCCc-CHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHhHhhccccccCCceEEEEchHHHHHHhcCCCccE
Confidence            4568999998753 666777777654 599999999887777754442         1 123333333334444567999


Q ss_pred             EEECCCC-------------chhHHHHHHhcccCCEEEEE
Q 019199          248 IIDTASG-------------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       248 vid~~g~-------------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      |+-....             ...++.+.+.|+|+|.++..
T Consensus       155 Ii~d~~~~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~  194 (314)
T 1uir_A          155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ  194 (314)
T ss_dssp             EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEECCCCcccccCcchhccHHHHHHHHHHhcCCCcEEEEE
Confidence            8743321             23478889999999999865

>2yqz_A Hypothetical protein TTHA0223; RNA methyltransferase, SAM, structural genomics, NPPSFA; HET: SAM; 1.80A {Thermus thermophilus} PDB: 2yr0_A

Probab=95.66  E-value=0.013  Score=50.03  Aligned_cols=96  Identities=16%  Similarity=0.133  Sum_probs=63.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .+.++.+||-+|+|. |..+..+++. +.+|++++.+++..+.+.+.+   .....+...+...+....+.+|+|+....
T Consensus        36 ~~~~~~~vLDiG~G~-G~~~~~l~~~-~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~d~~~~~~~~~~fD~v~~~~~  113 (263)
T 2yqz_A           36 PKGEEPVFLELGVGT-GRIALPLIAR-GYRYIALDADAAMLEVFRQKIAGVDRKVQVVQADARAIPLPDESVHGVIVVHL  113 (263)
T ss_dssp             CSSSCCEEEEETCTT-STTHHHHHTT-TCEEEEEESCHHHHHHHHHHTTTSCTTEEEEESCTTSCCSCTTCEEEEEEESC
T ss_pred             CCCCCCEEEEeCCcC-CHHHHHHHHC-CCEEEEEECCHHHHHHHHHHhhccCCceEEEEcccccCCCCCCCeeEEEECCc
Confidence            447889999999864 6667777765 789999999999888886553   11211211111111111256999986543


Q ss_pred             ------CchhHHHHHHhcccCCEEEEE
Q 019199          254 ------GDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       254 ------~~~~~~~~~~~l~~~G~iv~~  274 (344)
                            ....+..+.+.|+|+|+++..
T Consensus       114 l~~~~~~~~~l~~~~~~L~pgG~l~~~  140 (263)
T 2yqz_A          114 WHLVPDWPKVLAEAIRVLKPGGALLEG  140 (263)
T ss_dssp             GGGCTTHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhcCCHHHHHHHHHHHCCCCcEEEEE
Confidence                  133477888999999999876

>1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1

Probab=95.66  E-value=0.05  Score=48.16  Aligned_cols=91  Identities=14%  Similarity=0.147  Sum_probs=60.7

Q ss_pred             CEEEEECCChHHHHHHHHHHH--CCCeEE-EEeCCchh-HHHHHHhCCCcEEEeCCCHHHHHHh--cCCccEEEECCCCc
Q 019199          182 KSLGVIGLGGLGHMAVKFGKA--FGLNVT-VLSTSTSK-KEEALSLLGADKFVVSSDLEQMKAL--GKSLDFIIDTASGD  255 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~--~g~~V~-~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~--~~~~dvvid~~g~~  255 (344)
                      -+|.|+|+|.+|...+..+..  -+.++. ++++++++ ...+.+++|....  ..+.+.+.+.  ..++|+||++++..
T Consensus         5 irVaIIG~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~~~g~~~~--~~~~e~ll~~~~~~~iDvV~~atp~~   82 (312)
T 1nvm_B            5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSAS   82 (312)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHHHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCHH
T ss_pred             CEEEEEcCcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHHHcCCCcc--cCCHHHHHhccCCCCCcEEEECCChH
Confidence            468899999999988888743  456655 45555555 3333367886422  2222333222  25799999999976


Q ss_pred             hhHHHHHHhccc--CCEEEEE
Q 019199          256 HPFDAYMSLLKV--AGVYVLV  274 (344)
Q Consensus       256 ~~~~~~~~~l~~--~G~iv~~  274 (344)
                      .....+..+++.  +.++++.
T Consensus        83 ~h~~~a~~al~a~~Gk~Vi~e  103 (312)
T 1nvm_B           83 AHVQNEALLRQAKPGIRLIDL  103 (312)
T ss_dssp             HHHHHHHHHHHHCTTCEEEEC
T ss_pred             HHHHHHHHHHHhCCCCEEEEc
Confidence            667788888888  8887764

>3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A*

Probab=95.65  E-value=0.0057  Score=52.84  Aligned_cols=70  Identities=17%  Similarity=0.059  Sum_probs=52.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      +.+|||+|+ |.+|.+++..+...|++|+++++++.+..    ..+.. ...|-.+.+.+.+...++|++|++.|.
T Consensus         3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~~~~~~~~~~~D~vi~~Ag~   74 (267)
T 3rft_A            3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADANAVNAMVAGCDGIVHLGGI   74 (267)
T ss_dssp             EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCHHHHHHHHTTCSEEEECCSC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCHHHHHHHHcCCCEEEECCCC
Confidence            357999997 99999999998888999999998876542    11221 223556677777766789999998874

>4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp}

Probab=95.64  E-value=0.013  Score=49.86  Aligned_cols=70  Identities=17%  Similarity=0.056  Sum_probs=46.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHH-CCCeEEEEeCCch-hHHHHHHhCCCcEEEeCCCHHHHHHh-----cCCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKA-FGLNVTVLSTSTS-KKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~-~g~~V~~~~~~~~-~~~~~~~~~g~~~~v~~~~~~~~~~~-----~~~~dvvid~  251 (344)
                      .+.++||+|+ +++|.+.++.+.. .|++|++.+++++ ..+.+     .....|-.+.+.+.+.     .+++|+++++
T Consensus         3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n   77 (244)
T 4e4y_A            3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAENL-----KFIKADLTKQQDITNVLDIIKNVSFDGIFLN   77 (244)
T ss_dssp             CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCTTE-----EEEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred             CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccccc-----eEEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence            4678999998 9999998877665 6789998887765 21111     1112345555544332     2479999999


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .|.
T Consensus        78 Ag~   80 (244)
T 4e4y_A           78 AGI   80 (244)
T ss_dssp             CCC
T ss_pred             Ccc
Confidence            885

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	344
d1piwa1	192	b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehy	4e-27
d1uufa1	179	b.35.1.2 (A:3-144,A:313-349) Hypothetical protein	9e-26
d1uufa2	168	c.2.1.1 (A:145-312) Hypothetical protein YahK {Esc	1e-22
d2fzwa1	197	b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase	7e-21
d1piwa2	168	c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase	5e-20
d1e3ia1	202	b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase	8e-20
d1cdoa1	199	b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase	1e-19
d1llua1	175	b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase	1e-18
d1f8fa1	194	b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydr	3e-16
d1p0fa1	198	b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydro	1e-15
d1kola1	201	b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrog	4e-15
d1vj0a1	184	b.35.1.2 (A:2-155,A:338-367) Hypothetical protein	6e-15
d1rjwa1	171	b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase	8e-15
d1h2ba2	172	c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo	1e-14
d1e3ja1	178	b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sor	6e-14
d1f8fa2	174	c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {	2e-13
d1vj0a2	182	c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T	2e-12
d1d1ta2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	3e-12
d1p0fa2	174	c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog	4e-12
d2jhfa1	198	b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase	5e-12
d2jhfa2	176	c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (	2e-11
d1pl8a1	185	b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sor	2e-11
d1jvba1	177	b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase	2e-11
d1jqba1	177	b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secon	8e-11
d2fzwa2	176	c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (	1e-10
d1h2ba1	171	b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenas	2e-10
d1llua2	166	c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudom	1e-09
d1rjwa2	168	c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillu	1e-09
d1cdoa2	175	c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga	6e-09
d1e3ia2	174	c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (	1e-08
d1jqba2	174	c.2.1.1 (A:1140-1313) Bacterial secondary alcohol	2e-06
d1iz0a1	131	b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase	2e-06
d1xa0a1	152	b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homo	2e-06
d1e3ja2	170	c.2.1.1 (A:143-312) Ketose reductase (sorbitol deh	2e-05
d1tt7a1	162	b.35.1.2 (A:2-127,A:295-330) Hypothetical protein	3e-05
d1jvba2	170	c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeo	5e-05
d1yb5a2	174	c.2.1.1 (A:121-294) Quinone oxidoreductase {Human	9e-05
d1pqwa_	183	c.2.1.1 (A:) Putative enoyl reductase domain of po	1e-04
d1qora2	179	c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher	3e-04
d1v3va2	182	c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd	0.001
d1pl8a2	171	c.2.1.1 (A:146-316) Ketose reductase (sorbitol deh	0.002

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 192

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score =  103 bits (258), Expect = 4e-27
 Identities = 55/179 (30%), Positives = 90/179 (50%), Gaps = 6/179 (3%)

Query: 12  GWAARDPSGVLSPY--SFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGH 69
           G A +      +P    ++ +     D+ I I  CGVC +D+       G+ K PLV GH
Sbjct: 9   GIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGH 68

Query: 70  EIVGIVKEVGHNVS-RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADG 128
           EIVG V ++G   +   KVG  VGVG  V SC +C+ C +  E +C + V T++    DG
Sbjct: 69  EIVGKVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDG 128

Query: 129 TITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI-TVYTPMMRHKMNQPGKSLGV 186
            +++GGY++Y+ VHE +   I  +  +    P+  AG+   +  M +  + +   +L  
Sbjct: 129 YVSQGGYANYVRVHEHFVVPIPENIWVE-TLPVGEAGVHEAFERMEKGDV-RYRFTLVG 185

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 179

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 99.6 bits (247), Expect = 9e-26
 Identities = 67/173 (38%), Positives = 92/173 (53%), Gaps = 2/173 (1%)

Query: 14  AARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVG 73
            A      L P    RR  G +DV I I +CGVC++D+   R++   + YP VPGHEIVG
Sbjct: 5   GAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG 64

Query: 74  IVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGT-ITK 132
            V  VG  V ++  GD VGVG  V+SC+ CE C DGLE +C     T+N+   D    T 
Sbjct: 65  RVVAVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTL 124

Query: 133 GGYSSYIVVHERYCYKI-ANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSL 184
           GGYS  IVVHERY  +I   D  +  A  +  A   +    ++++     ++L
Sbjct: 125 GGYSQQIVVHERYVLRIRVADIEMIRADQINEAYERMLRGDVKYRFVIDNRTL 177

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

 Score = 91.2 bits (225), Expect = 1e-22
 Identities = 72/168 (42%), Positives = 95/168 (56%), Gaps = 14/168 (8%)

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS 211
              LA  APLLCAGIT Y+P+   +   PGK +GV+G+GGLGHM +K   A G +V    
Sbjct: 3   QEQLAAVAPLLCAGITTYSPLRHWQA-GPGKKVGVVGIGGLGHMGIKLAHAMGAHVVA-F 60

Query: 212 TSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVY 271
           T++  K EA   LGAD+ V S + ++M A  KS DFI++T +  H  D + +LLK  G  
Sbjct: 61  TTSEAKREAAKALGADEVVNSRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTM 120

Query: 272 VLVGFPSKVKFSPASLN------------IGGTKDTQEMLEYCAAHKI 307
            LVG P+    SP   N            IGG  +TQEML++CA H I
Sbjct: 121 TLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEMLDFCAEHGI 168

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 197

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 86.8 bits (214), Expect = 7e-21
 Identities = 35/187 (18%), Positives = 63/187 (33%), Gaps = 15/187 (8%)

Query: 15  ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGI 74
           A +    LS          + +V I I    VC+ D         +  +P++ GH   GI
Sbjct: 12  AWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGI 71

Query: 75  VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF------------- 121
           V+ VG  V++ K GD V +  Y+  C +C++C +     C +   T              
Sbjct: 72  VESVGEGVTKLKAGDTV-IPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFT 130

Query: 122 -NAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
                    +    +S Y VV +    KI     +        +   +          + 
Sbjct: 131 CKGKTILHYMGTSTFSEYTVVADISVAKIDPLIKVDEFVTHNLSFDEINKAFELMHSGKS 190

Query: 181 GKSLGVI 187
            +++  I
Sbjct: 191 IRTVVKI 197

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 83.5 bits (205), Expect = 5e-20
 Identities = 47/168 (27%), Positives = 79/168 (47%), Gaps = 16/168 (9%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           P  LAAPLLC G+TVY+P++R+    PGK +G++GLGG+G M     KA G   T + + 
Sbjct: 2   PSHLAAPLLCGGLTVYSPLVRNGC-GPGKKVGIVGLGGIGSMGTLISKAMG-AETYVISR 59

Query: 214 TSKKEEALSLLGADKFVVSS---DLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGV 270
           +S+K E    +GAD ++ +    D  +       L  +  ++  D  F+     +KV G 
Sbjct: 60  SSRKREDAMKMGADHYIATLEEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGR 119

Query: 271 YVLVGFPSKVKFSPASL-----------NIGGTKDTQEMLEYCAAHKI 307
            V +  P + +                  +G  K+  ++L+  +   I
Sbjct: 120 IVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLLKLVSEKDI 167

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 202

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 84.2 bits (207), Expect = 8e-20
 Identities = 41/194 (21%), Positives = 70/194 (36%), Gaps = 27/194 (13%)

Query: 15  ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGI 74
           A      L           + +V I +    VC  D+    +    + +P+V GHE  GI
Sbjct: 14  AWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDI-NATDPKKKALFPVVLGHECAGI 72

Query: 75  VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR------------------ 116
           V+ VG  V+ FK GD V +  +   C+ C+ C   L   C +                  
Sbjct: 73  VESVGPGVTNFKPGDKV-IPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRT 131

Query: 117 SVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHK 176
           S +T         +    +S Y VV E    ++ +++ L L         ++        
Sbjct: 132 SRFTCKGRSIYHFMGVSSFSQYTVVSEANLARVDDEFDLDLLVTHALPFESIN-----DA 186

Query: 177 MN--QPGKSLGVIG 188
           ++  + GKS+  I 
Sbjct: 187 IDLMKEGKSIRTIL 200

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 199

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 83.8 bits (206), Expect = 1e-19
 Identities = 36/187 (19%), Positives = 70/187 (37%), Gaps = 15/187 (8%)

Query: 15  ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGI 74
           A + +  L           ++++ I I   GVC+ D+           +P+V GHE  GI
Sbjct: 14  AWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGI 73

Query: 75  VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCAR--------------SVYT 120
           V+ VG  V+ F+ G+ V +  +++ C +C +C       C +              + +T
Sbjct: 74  VESVGPGVTEFQPGEKV-IPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFT 132

Query: 121 FNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
                    +    +S Y VV++    KI     L           +V   +   K  + 
Sbjct: 133 CKGRKVLQFLGTSTFSQYTVVNQIAVAKIDPSVKLDEFITHRMPLESVNDAIDLMKHGKC 192

Query: 181 GKSLGVI 187
            +++  +
Sbjct: 193 IRTVLSL 199

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 175

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 80.0 bits (196), Expect = 1e-18
 Identities = 38/156 (24%), Positives = 59/156 (37%), Gaps = 10/156 (6%)

Query: 33  GSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           G   V + I   GVC+ D+             P +PGHE VG V  VG  V+R K GD V
Sbjct: 29  GPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGVTRVKEGDRV 88

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
           G+     +C  CE+C  G E  C     T  +++         Y+ Y++    Y   +  
Sbjct: 89  GIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGG-------YAEYVLADPNYVGILPK 141

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI 187
           +    +    L     +   M        G+ +  +
Sbjct: 142 NVKATIHPGKLDDINQILDQM--RAGQIEGRIVLEM 175

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 194

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 73.8 bits (180), Expect = 3e-16
 Identities = 38/218 (17%), Positives = 67/218 (30%), Gaps = 44/218 (20%)

Query: 8   KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP 67
           KD +              +   R    D+V + +   G+C+   +  R++      P V 
Sbjct: 2   KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCH-TDLIVRDQKYPVPLPAVL 60

Query: 68  GHEIVGIVKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCA------------ 115
           GHE  GI++ +G NV+  +VGDHV +      C  C  CN G   +C+            
Sbjct: 61  GHEGSGIIEAIGPNVTELQVGDHVVL--SYGYCGKCTQCNTGNPAYCSEFFGRNFSGADS 118

Query: 116 ----RSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP 171
                       +  D    +  +++Y +  E    K+  D+P                 
Sbjct: 119 EGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTKDFPFDQLVKFYAF------- 171

Query: 172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV 209
                               +   A+   K   L   +
Sbjct: 172 ------------------DEINQAAIDSRKGITLKPII 191

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 72.2 bits (176), Expect = 1e-15
 Identities = 42/195 (21%), Positives = 65/195 (33%), Gaps = 26/195 (13%)

Query: 15  ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGI 74
           A +P   LS  +       + +V I I   G+C +D      +   SK+P++ GHE VG+
Sbjct: 14  AWEPHKPLSLETITVAPPKAHEVRIKILASGICGSD-SSVLKEIIPSKFPVILGHEAVGV 72

Query: 75  VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAI---DADGTIT 131
           V+ +G  V+  K GD V +  +V  C  C  C       C ++          D     T
Sbjct: 73  VESIGAGVTCVKPGDKV-IPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFT 131

Query: 132 KGG-----------YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQP 180
             G           ++ Y VV +    KI     +            +            
Sbjct: 132 CRGKPIYNLMGTSTFTEYTVVADIAVAKIDPKINVNFLVSTKLTLDQI----------NK 181

Query: 181 GKSLGVIGLGGLGHM 195
              L   G G    M
Sbjct: 182 AFELLSSGQGVRSIM 196

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 201

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

 Score = 71.1 bits (173), Expect = 4e-15
 Identities = 18/181 (9%), Positives = 42/181 (23%), Gaps = 12/181 (6%)

Query: 29  RRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
           R       V + +    +C +D    R +        +     +                
Sbjct: 27  RGKKIEHGVILKVVSTNICGSDQHMVRGRTTAQVG--LVLGHEITGEVIEKGRDVENLQI 84

Query: 89  DHVGVGTYVNSCRDCEYCNDGLE---VHCARSVYTFNAIDADGTITKGGYSSYIVVH--E 143
             +    +  +C  C  C +      +    +         D     GG + Y++V   +
Sbjct: 85  GDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYAD 144

Query: 144 RYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF 203
               K+ +         +               ++   +  G    G      +   K F
Sbjct: 145 FNLLKLPDRDKAMEKINIAEVVGVQV-----ISLDDAPRGYGEFDAGVPKKFVIDPHKTF 199

Query: 204 G 204
            
Sbjct: 200 S 200

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 184

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 69.9 bits (170), Expect = 6e-15
 Identities = 37/161 (22%), Positives = 58/161 (36%), Gaps = 9/161 (5%)

Query: 15  ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGI 74
               +  L    F    +    + + I   GVC +DV   R +      P++ GHE  G 
Sbjct: 10  LEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGR 69

Query: 75  VKEVGHNVSRFKVGDHV----GVGTYVNSCRDCEYCNDGLEVHC--ARSVYTFNAIDADG 128
           V EV                  V     +C +C +C    E +    R VY  N   ++ 
Sbjct: 70  VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEY 129

Query: 129 TITKGGYSSYIVVH-ERYCYKIANDYPLALAAPLLCAGITV 168
              +G YSS+IV+  E    K++    +    PL  A   +
Sbjct: 130 PHLRGCYSSHIVLDPETDVLKVSEK--ITHRLPLKEANKAL 168

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 69.2 bits (168), Expect = 8e-15
 Identities = 43/174 (24%), Positives = 64/174 (36%), Gaps = 12/174 (6%)

Query: 16  RDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVP-GHEIVGI 74
                 L      +  +   +V + I  CGVC+ D+              +  GHE VGI
Sbjct: 7   EQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGI 66

Query: 75  VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGG 134
           V+EVG  V+  KVGD VG+    ++C  C+YC  G E  C                  GG
Sbjct: 67  VEEVGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGY-------SVDGG 119

Query: 135 YSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG 188
           Y+ Y      Y  KI ++  +    PL          +   K    G+ +  + 
Sbjct: 120 YAEYCRAAADYVVKIPDNTIIE-VQPLEKINEVFDRML---KGQINGRVVLTLE 169

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 68.8 bits (167), Expect = 1e-14
 Identities = 38/167 (22%), Positives = 66/167 (39%), Gaps = 15/167 (8%)

Query: 155 LALAAPLLCAGITVYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           L   APL  AGIT Y  + +  +   PG  + ++G+GGLGH+AV+  K       +    
Sbjct: 6   LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDV 65

Query: 214 TSKKEEALSLLGADKFVVSSD----LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAG 269
             +K +    LGAD  V +             G+ ++  +D        D    LL   G
Sbjct: 66  KEEKLKLAERLGADHVVDARRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMG 125

Query: 270 VYVLVGFPSKVKFSPASL----------NIGGTKDTQEMLEYCAAHK 306
             ++VG+  +++F    +           +G   +  E++      K
Sbjct: 126 RLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHELVTLALQGK 172

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 178

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 66.9 bits (162), Expect = 6e-14
 Identities = 36/160 (22%), Positives = 62/160 (38%), Gaps = 11/160 (6%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGD---SKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
              D+V + + + G+C +DV +  +        K P+V GHE  G V +VG NV   K G
Sbjct: 23  PKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKG 82

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D V V   V  CR C++C +G    C    +             G  + Y V    +C+K
Sbjct: 83  DRVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHK 135

Query: 149 IANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG 188
           + ++  +                    +  +   ++ V+ 
Sbjct: 136 LPDNCNVKQLVTHSFKLEQTVDAFEAARK-KADNTIKVMI 174

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

 Score = 65.3 bits (158), Expect = 2e-13
 Identities = 27/139 (19%), Positives = 49/139 (35%), Gaps = 4/139 (2%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           P+ L  PL C   T     +      P  S    G G +G  A+   K  G ++ +    
Sbjct: 2   PIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDI 61

Query: 214 TSKKEEALSLLGADKFVVSSDLEQMKAL----GKSLDFIIDTASGDHPFDAYMSLLKVAG 269
              + E    LGA   + S   + + A+       ++F +++          +  L + G
Sbjct: 62  VESRLELAKQLGATHVINSKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILG 121

Query: 270 VYVLVGFPSKVKFSPASLN 288
              +VG P     +   +N
Sbjct: 122 KIAVVGAPQLGTTAQFDVN 140

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

 Score = 62.7 bits (151), Expect = 2e-12
 Identities = 29/174 (16%), Positives = 58/174 (33%), Gaps = 22/174 (12%)

Query: 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST 214
           L + A  +C+G T Y     +  +  GK++ + G G LG   V   ++ G    ++   +
Sbjct: 3   LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGS 62

Query: 215 SKKEEALSLLGADKFVVSSDLEQMKAL--------GKSLDFIIDTASGDHPFDAYMSLLK 266
             + +    +GAD  +   +    +          G+  DFI++             LL+
Sbjct: 63  PNRLKLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLR 122

Query: 267 VAGVYVLVGFPS---KVKFSPASLNI-----------GGTKDTQEMLEYCAAHK 306
             G Y + G       V F      +             T    + +   + + 
Sbjct: 123 RGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSDTSHFVKTVSITSRNY 176

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 62.2 bits (150), Expect = 3e-12
 Identities = 29/138 (21%), Positives = 46/138 (33%), Gaps = 7/138 (5%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           P      + C   T Y   ++    +PG +  V GLGG+G   +   K+ G +  +    
Sbjct: 3   PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDL 62

Query: 214 TSKKEEALSLLGADKFVVSSDLEQMKALGKSL-------DFIIDTASGDHPFDAYMSLLK 266
              K E    +GA + +   D  +  +   S                 +   DA  S   
Sbjct: 63  NKDKFEKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHM 122

Query: 267 VAGVYVLVGFPSKVKFSP 284
             G  V+VG P   K   
Sbjct: 123 NYGTSVVVGVPPSAKMLT 140

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

 Score = 61.8 bits (149), Expect = 4e-12
 Identities = 29/134 (21%), Positives = 49/134 (36%), Gaps = 7/134 (5%)

Query: 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK 217
           +  + C   T Y   +      PG +  V GLGG+G  A+   KA G +  +   +   K
Sbjct: 5   SCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDK 64

Query: 218 EEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDTASGDHPFDAYMSLLKVAGV 270
                 LGA + +   D ++           G     +      +   +A  S    +GV
Sbjct: 65  FPKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGV 124

Query: 271 YVLVGFPSKVKFSP 284
            V++G  S  +  P
Sbjct: 125 TVVLGLASPNERLP 138

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 198

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 62.2 bits (150), Expect = 5e-12
 Identities = 35/189 (18%), Positives = 57/189 (30%), Gaps = 21/189 (11%)

Query: 15  ARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGI 74
             +     S          + +V I +   G+C +D             P++ GHE  GI
Sbjct: 14  LWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLVT-PLPVIAGHEAAGI 72

Query: 75  VKEVGHNVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITK-- 132
           V+ +G  V+  + GD V         +     +          +        DGT     
Sbjct: 73  VESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTC 132

Query: 133 -----------GGYSSYIVVHERYCYKIANDYPL--ALAAPLLCAGITVYTPMMRHKMNQ 179
                        +S Y VV E    KI   + L   +   L    I     ++R     
Sbjct: 133 RGKPIHHFLGTSTFSQYTVVDEISVAKIDAAFALDPLITHVLPFEKINEGFDLLR----- 187

Query: 180 PGKSLGVIG 188
            G+S+  I 
Sbjct: 188 SGESIRTIL 196

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

 Score = 60.0 bits (144), Expect = 2e-11
 Identities = 24/127 (18%), Positives = 41/127 (32%), Gaps = 6/127 (4%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           PL     + C   T Y   ++      G +  V GLGG+G   +   KA G    +    
Sbjct: 2   PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDI 61

Query: 214 TSKKEEALSLLGADKFVVSSDLE------QMKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
              K      +GA + V   D +        +     +DF  +           +S  + 
Sbjct: 62  NKDKFAKAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQE 121

Query: 268 AGVYVLV 274
           A    ++
Sbjct: 122 AYGVSVI 128

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 185

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (144), Expect = 2e-11
 Identities = 31/163 (19%), Positives = 60/163 (36%), Gaps = 16/163 (9%)

Query: 32  VGSDDVSITITHCGVCYADV---IWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVG 88
            G ++V + +   G+C +DV    + R  +   K P+V GHE  G V++VG +V   K G
Sbjct: 29  PGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHLKPG 88

Query: 89  DHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYK 148
           D V +        + E+C  G         +             G    +   +  +CYK
Sbjct: 89  DRVAIEPGAP-RENDEFCKMGRYNLSPSIFFCA------TPPDDGNLCRFYKHNAAFCYK 141

Query: 149 IANDYPLALAAPL-LCAGITVYTPMMRHKMNQPGKSLGVIGLG 190
           + ++    +     L   +  +    +      G  + ++   
Sbjct: 142 LPDNVKPLVTHRFPLEKALEAFETFKK----GLGLKI-MLKCD 179

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 59.6 bits (143), Expect = 2e-11
 Identities = 39/147 (26%), Positives = 57/147 (38%), Gaps = 17/147 (11%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGDS--------KYPLVPGHEIVGIVKEVGHNVS 83
                V I +   GVC++DV   + + G+         K P+  GHEI G ++EVG  V 
Sbjct: 23  PKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEVV 82

Query: 84  RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVV-H 142
            +  GD V          +C YC  G E  C    +        G    G Y+ Y++V H
Sbjct: 83  GYSKGDLV-AVNPWQGEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPH 134

Query: 143 ERYCYKIANDYPLALAAPLLCAGITVY 169
            +Y YK+    P+      L       
Sbjct: 135 YKYMYKLRRVKPMITKTMKLEEANEAI 161

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 177

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 58.1 bits (139), Expect = 8e-11
 Identities = 29/169 (17%), Positives = 51/169 (30%), Gaps = 18/169 (10%)

Query: 31  AVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH 90
             GS D  +       C +D+          +  ++ GHE VG V EVG  V  FK GD 
Sbjct: 21  VAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDR 80

Query: 91  VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE--RYCYK 148
           V V               G + H    +  +   +    +    +  Y  V++       
Sbjct: 81  VIV-PCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGV----FGEYFHVNDADMNLAI 135

Query: 149 IANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAV 197
           +  D  L+     +  G                ++L ++       +  
Sbjct: 136 LPKDVDLSKLVTHVYHGFDH-----------IEEALLLMKDKPKDLIKA 173

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

 Score = 57.7 bits (138), Expect = 1e-10
 Identities = 23/128 (17%), Positives = 39/128 (30%), Gaps = 6/128 (4%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           PL     L C   T Y   +     +PG    V GLGG+G   +   K  G +  +    
Sbjct: 2   PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDI 61

Query: 214 TSKKEEALSLLGADKFVVSSDLEQ------MKALGKSLDFIIDTASGDHPFDAYMSLLKV 267
              K       GA + +   D  +      ++     +D+  +         A +     
Sbjct: 62  NKDKFARAKEFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHK 121

Query: 268 AGVYVLVG 275
                +V 
Sbjct: 122 GWGVSVVV 129

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 171

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

 Score = 56.6 bits (135), Expect = 2e-10
 Identities = 35/160 (21%), Positives = 61/160 (38%), Gaps = 13/160 (8%)

Query: 30  RAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYP---LVPGHEIVGIVKEVGHNVSRFK 86
           R  G  DV + I   GVC+ D+   +    +   P      GHE VG ++EV   V   +
Sbjct: 21  RLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE 80

Query: 87  VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYC 146
            GD V +     +   C  C  G ++HC    +        G    GG++ ++    R  
Sbjct: 81  KGDPV-ILHPAVTDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSV 132

Query: 147 YKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGV 186
            K+  D  + +    L     V   + +      G+++ +
Sbjct: 133 IKLPKDVRVEVDIHKLDEINDVLERLEK--GEVLGRAVLI 170

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} Length = 166

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 42/164 (25%), Positives = 71/164 (43%), Gaps = 14/164 (8%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
             A  AP+LCAG+TVY  + +    +PG+ + + G+GGLGH+AV++ +A GL+V  +   
Sbjct: 2   EFAEIAPILCAGVTVYKGLKQTNA-RPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDID 60

Query: 214 TSKKEEALS--LLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVY 271
            +K E A                +E ++        ++ TA  +  F   + + +  G  
Sbjct: 61  DAKLELARKLGASLTVNARQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTI 120

Query: 272 VLVGFPSKVKFSPASL-----------NIGGTKDTQEMLEYCAA 304
            LVG P     +P               +G   D QE L++   
Sbjct: 121 ALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEALDFAGE 164

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} Length = 168

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 54.7 bits (130), Expect = 1e-09
 Identities = 48/167 (28%), Positives = 72/167 (43%), Gaps = 14/167 (8%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
               AAP+ CAG+T Y  +      +PG+ + + G+GGLGH+AV++ KA GLNV  +   
Sbjct: 2   SFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIG 60

Query: 214 TSKKEEALSLLGADKFVVS--SDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVY 271
             K E A  L              + MK     +   + TA     F +  + ++  G  
Sbjct: 61  DEKLELAKELGADLVVNPLKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGAC 120

Query: 272 VLVGFPSKVKFSPASLNI-----------GGTKDTQEMLEYCAAHKI 307
           VLVG P +    P    +           G  KD QE L++ A  K+
Sbjct: 121 VLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEALQFAAEGKV 167

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

 Score = 52.7 bits (125), Expect = 6e-09
 Identities = 33/143 (23%), Positives = 49/143 (34%), Gaps = 7/143 (4%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           PL     L C   T +   +     +PG +  V GLG +G  AV    + G    +    
Sbjct: 2   PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDL 61

Query: 214 TSKKEEALSLLGADKFVVSSDLE-------QMKALGKSLDFIIDTASGDHPFDAYMSLLK 266
              K E   + GA  FV  +D              G     +    +     +A  S LK
Sbjct: 62  NPDKFEKAKVFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLK 121

Query: 267 VAGVYVLVGFPSKVKFSPASLNI 289
             GV VLVG+      +   + +
Sbjct: 122 GWGVSVLVGWTDLHDVATRPIQL 144

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

 Score = 51.9 bits (123), Expect = 1e-08
 Identities = 25/133 (18%), Positives = 44/133 (33%), Gaps = 7/133 (5%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
            L     + C   + Y   +      PG +  V GLG +G  A+   K  G +  +    
Sbjct: 2   NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDI 61

Query: 214 TSKKEEALSLLGADKFVVSSDLEQMKALGKS------LDFIIDTASGDHPFD-AYMSLLK 266
             +K      LGA   +   +L++      +      +D+ +D A        A    + 
Sbjct: 62  NGEKFPKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVL 121

Query: 267 VAGVYVLVGFPSK 279
             G   +VG    
Sbjct: 122 GWGSCTVVGAKVD 134

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

 Score = 45.7 bits (107), Expect = 2e-06
 Identities = 28/166 (16%), Positives = 49/166 (29%), Gaps = 21/166 (12%)

Query: 154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS 213
           PL  A  +     T +       + + G S+ VIG+G +G M +   K  G    +   S
Sbjct: 2   PLENAVMITDMMTTGFHGAELADI-EMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGS 60

Query: 214 TSKKEEALSLLGADKFVVSSDLEQMKALGK-----SLDFIIDTASGDHPFDAYMSLLKVA 268
                EA    GA   +   +      + K      +D +I    G       + ++K  
Sbjct: 61  RPICVEAAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPG 120

Query: 269 GVYVLVGFPSKVKFSPASLN---------------IGGTKDTQEML 299
           G+   + +                             G +   E L
Sbjct: 121 GIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRLRAERL 166

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 131

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

 Score = 44.4 bits (104), Expect = 2e-06
 Identities = 7/90 (7%), Positives = 21/90 (23%), Gaps = 2/90 (2%)

Query: 95  TYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP 154
            ++              +     V           + +GG +  + V +     +    P
Sbjct: 41  DHLMRLGAYLTRLHPPFIPGMEVVGVVEGRRYAALVPQGGLAERVAVPKGALLPLPEGRP 100

Query: 155 LALAAPLLCAGITVYTPMMRHKMNQPGKSL 184
           +             +  ++       GK +
Sbjct: 101 VVGPVFPFAEAEAAFRALLDR--GHTGKVV 128

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 152

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

 Score = 44.9 bits (105), Expect = 2e-06
 Identities = 23/157 (14%), Positives = 40/157 (25%), Gaps = 32/157 (20%)

Query: 32  VGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV 91
           +   DV + + +  V Y D        G           I      V     RF+ GD V
Sbjct: 28  LPEGDVLVRVHYSSVNYKDG-LASIPDGKIVKTYPFVPGIDLAGVVVSSQHPRFREGDEV 86

Query: 92  GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIAN 151
                           +    H                   GGYS Y  +H  +   +  
Sbjct: 87  -----------IATGYEIGVTHF------------------GGYSEYARLHGEWLVPLPK 117

Query: 152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIG 188
                +A  +  A +         +    G+++  + 
Sbjct: 118 GLE-RIAQEISLAELPQAL-KRILRGELRGRTVVRLA 152

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

 Score = 42.3 bits (98), Expect = 2e-05
 Identities = 38/170 (22%), Positives = 63/170 (37%), Gaps = 25/170 (14%)

Query: 156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS 215
           AL  PL            R    Q G ++ VIG G +G ++V   KA+G  V   + S  
Sbjct: 7   ALLEPLSVGVHAC-----RRAGVQLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPR 61

Query: 216 KKEEALSLLGADKFVVSSDLEQM---------KALGKSLDFIIDTASGDHPFDAYMSLLK 266
           + E A +  GAD  +V    ++           A+G   +  ID +  +      +++ +
Sbjct: 62  RLEVAKN-CGADVTLVVDPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITR 120

Query: 267 VAGVYVLVGFPSK-VKFSPASLN---------IGGTKDTQEMLEYCAAHK 306
             G  +LVG  S+ V     +                D    LE  A+ +
Sbjct: 121 TGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCNDYPIALEMVASGR 170

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 162

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

 Score = 41.8 bits (97), Expect = 3e-05
 Identities = 15/103 (14%), Positives = 24/103 (23%), Gaps = 3/103 (2%)

Query: 96  YVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPL 155
            +             +   A            G    GG S Y  V   +   +  +  L
Sbjct: 62  LILGIDAAGTVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPLPQNLSL 121

Query: 156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVK 198
             A       I      +      PG    ++     G + VK
Sbjct: 122 KEAMVDQLLTIVDREVSLEET---PGALKDILQNRIQGRVIVK 161

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} Length = 170

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

 Score = 41.3 bits (95), Expect = 5e-05
 Identities = 45/166 (27%), Positives = 67/166 (40%), Gaps = 18/166 (10%)

Query: 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSK 216
           AAPL C+GIT Y  + +  +  P K+L V+G  GGLG MAV+  KA      +      +
Sbjct: 6   AAPLTCSGITTYRAVRKASL-DPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREE 64

Query: 217 KEEALSLLGADKFVVSSDLEQMKALGK-----SLDFIIDTASGDHPFDAYMSLLKVAGVY 271
             EA    GAD  + +S  + +  + +      +D +ID  + +     Y   L   G Y
Sbjct: 65  AVEAAKRAGADYVINASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKY 124

Query: 272 VLVGFPSKVKFSPASLNI-----------GGTKDTQEMLEYCAAHK 306
           V+VG         A L             G   D   ++    A K
Sbjct: 125 VMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSDFLGIMRLAEAGK 170

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (93), Expect = 9e-05
 Identities = 22/134 (16%), Positives = 48/134 (35%), Gaps = 4/134 (2%)

Query: 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK 217
            A +     T Y  ++     + G+S+ V G  G   +A            + +  T + 
Sbjct: 6   GAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEG 65

Query: 218 EEALSLLGADKFVVSSDLEQMKALGKSL----DFIIDTASGDHPFDAYMSLLKVAGVYVL 273
           ++ +   GA +     ++  +  + K +      II     +      +SLL   G  ++
Sbjct: 66  QKIVLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIV 125

Query: 274 VGFPSKVKFSPASL 287
           VG    ++ +P   
Sbjct: 126 VGSRGTIEINPRDT 139

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

 Score = 40.0 bits (92), Expect = 1e-04
 Identities = 20/125 (16%), Positives = 40/125 (32%), Gaps = 4/125 (3%)

Query: 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK 217
           AA    A +T +  +       PG+ + +    G   MA              +  +  K
Sbjct: 3   AATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAK 62

Query: 218 EEALSLLGADKFVVSSDL----EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVL 273
            E LS LG +    S  +    E ++        ++  +         + +L   G ++ 
Sbjct: 63  REMLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIE 122

Query: 274 VGFPS 278
           +G   
Sbjct: 123 LGKKD 127

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

 Score = 38.8 bits (89), Expect = 3e-04
 Identities = 23/121 (19%), Positives = 47/121 (38%), Gaps = 6/121 (4%)

Query: 158 AAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGG-LGHMAVKFGKAFGLNVTVLSTSTSK 216
           AA     G+TVY  + +    +P +        G +G +A ++ KA G  +     +  K
Sbjct: 6   AAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQK 65

Query: 217 KEEALSLLGADKFVVSSDL----EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYV 272
            + AL   GA + +   +        +  G     ++  + G   ++  +  L+  G+ V
Sbjct: 66  AQSALK-AGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMV 124

Query: 273 L 273
            
Sbjct: 125 S 125

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

 Score = 37.0 bits (84), Expect = 0.001
 Identities = 27/129 (20%), Positives = 48/129 (37%), Gaps = 7/129 (5%)

Query: 154 PLALA-APLLCAGITVYTPMMRHKMNQPGKSLGVI-GLGGLGHMAVKFGKAFGLNVTVLS 211
           PL+LA   +   G+T Y  ++     + G+++ V    G +G +  +  K  G  V   +
Sbjct: 2   PLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAA 61

Query: 212 TSTSKKEEALSLLGADKFVVSSDLEQMKALGKS----LDFIIDTASGDHPFDAYMSLLKV 267
            S  K      +     F   +     +AL K+     D   D   G    +  +S +K 
Sbjct: 62  GSDEKIAYLKQIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNV-GGEFLNTVLSQMKD 120

Query: 268 AGVYVLVGF 276
            G   + G 
Sbjct: 121 FGKIAICGA 129

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} Length = 171

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.0 bits (82), Expect = 0.002
 Identities = 30/169 (17%), Positives = 51/169 (30%), Gaps = 22/169 (13%)

Query: 156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS 215
           AL  PL            R  +   G  + V G G +G + +   KA G    V++  ++
Sbjct: 7   ALIEPLSVG----IHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSA 61

Query: 216 KKEEALSLLGADKFVVSSDLEQM-------KALGKSLDFIIDTASGDHPFDAYMSLLKVA 268
            +      +GAD  +  S              LG   +  I+    +    A +   +  
Sbjct: 62  TRLSKAKEIGADLVLQISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSG 121

Query: 269 GVYVLVGFPSK-VKFSPASLNI---------GGTKDTQEMLEYCAAHKI 307
           G  VLVG  S+          I                  +   A+  +
Sbjct: 122 GTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNTWPVAISMLASKSV 170

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	344
d1cdoa1	199	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	100.0
d1piwa1	192	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	100.0
d1e3ja1	178	Ketose reductase (sorbitol dehydrogenase) {Silverl	100.0
d2fzwa1	197	Alcohol dehydrogenase {Human (Homo sapiens), diffe	100.0
d1llua1	175	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	100.0
d1e3ia1	202	Alcohol dehydrogenase {Mouse (Mus musculus), class	100.0
d1h2ba1	171	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	100.0
d1f8fa1	194	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	100.0
d1vj0a1	184	Hypothetical protein TM0436 {Thermotoga maritima [	100.0
d1uufa1	179	Hypothetical protein YahK {Escherichia coli [TaxId	99.98
d1pl8a1	185	Ketose reductase (sorbitol dehydrogenase) {Human (	99.97
d1kola1	201	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.97
d2jhfa1	198	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.97
d1rjwa1	171	Alcohol dehydrogenase {Bacillus stearothermophilus	99.97
d1p0fa1	198	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.97
d1jvba1	177	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.97
d1jqba1	177	Bacterial secondary alcohol dehydrogenase {Clostri	99.96
d1yb5a1	150	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.96
d1qora1	147	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.95
d1xa0a1	152	B. subtilis YhfP homologue {Bacillus stearothermop	99.93
d1iz0a1	131	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.93
d1tt7a1	162	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.91
d1o89a1	146	Hypothetical protein YhdH {Escherichia coli [TaxId	99.91
d1piwa2	168	Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas	99.91
d1uufa2	168	Hypothetical protein YahK {Escherichia coli [TaxId	99.91
d1yb5a2	174	Quinone oxidoreductase {Human (Homo sapiens) [TaxI	99.9
d1e3ia2	174	Alcohol dehydrogenase {Mouse (Mus musculus), class	99.9
d1llua2	166	Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax	99.9
d1f8fa2	174	Benzyl alcohol dehydrogenase {Acinetobacter calcoa	99.9
d1pqwa_	183	Putative enoyl reductase domain of polyketide synt	99.89
d1jqba2	174	Bacterial secondary alcohol dehydrogenase {Clostri	99.89
d1xa0a2	176	B. subtilis YhfP homologue {Bacillus stearothermop	99.89
d1jvba2	170	Alcohol dehydrogenase {Archaeon Sulfolobus solfata	99.89
d1h2ba2	172	Alcohol dehydrogenase {Archaeon Aeropyrum pernix [	99.89
d1rjwa2	168	Alcohol dehydrogenase {Bacillus stearothermophilus	99.88
d1qora2	179	Quinone oxidoreductase {Escherichia coli [TaxId: 5	99.88
d1gu7a1	175	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.88
d1p0fa2	174	Alcohol dehydrogenase {Frog (Rana perezi) [TaxId:	99.88
d1vj0a2	182	Hypothetical protein TM0436 {Thermotoga maritima [	99.88
d1pl8a2	171	Ketose reductase (sorbitol dehydrogenase) {Human (	99.87
d1iz0a2	171	Quinone oxidoreductase {Thermus thermophilus [TaxI	99.87
d1e3ja2	170	Ketose reductase (sorbitol dehydrogenase) {Silverl	99.86
d2fzwa2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.85
d1v3va2	182	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.85
d1gu7a2	189	2,4-dienoyl-CoA reductase {Yeast (Candida tropical	99.85
d1d1ta2	176	Alcohol dehydrogenase {Human (Homo sapiens), diffe	99.85
d1cdoa2	175	Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI	99.83
d1vj1a2	187	Putative zinc-binding alcohol dehydrogenase {Mouse	99.83
d2jhfa2	176	Alcohol dehydrogenase {Horse (Equus caballus) [Tax	99.83
d1o89a2	177	Hypothetical protein YhdH {Escherichia coli [TaxId	99.81
d1kola2	195	Formaldehyde dehydrogenase {Pseudomonas putida [Ta	99.78
d1tt7a2	167	Hypothetical protein YhfP {Bacillus subtilis [TaxI	99.75
d1vj1a1	166	Putative zinc-binding alcohol dehydrogenase {Mouse	99.66
d1v3va1	147	Leukotriene b4 12-hydroxydehydrogenase/prostagland	99.65
d1o8ca2	77	Hypothetical protein YhdH {Escherichia coli [TaxId	99.4
d1pjca1	168	L-alanine dehydrogenase {Phormidium lapideum [TaxI	98.42
d1l7da1	183	Nicotinamide nucleotide transhydrogenase dI compon	98.26
d1luaa1	191	Methylene-tetrahydromethanopterin dehydrogenase {M	98.16
d1pr9a_	244	Carbonyl reductase {Human (Homo sapiens) [TaxId: 9	98.0
d1hdca_	254	3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre	97.96
d1q7ba_	243	beta-keto acyl carrier protein reductase {Escheric	97.93
d1nffa_	244	Putative oxidoreductase Rv2002 {Mycobacterium tube	97.91
d1gpja2	159	Glutamyl tRNA-reductase middle domain {Archaeon Me	97.87
d2d1ya1	248	Hypothetical protein TTHA0369 {Thermus thermophilu	97.86
d1hxha_	253	3beta/17beta hydroxysteroid dehydrogenase {Comamon	97.86
d1dl5a1	213	Protein-L-isoaspartyl O-methyltransferase {Thermot	97.84
d1jg1a_	215	Protein-L-isoaspartyl O-methyltransferase {Archaeo	97.81
d1vl8a_	251	Gluconate 5-dehydrogenase {Thermotoga maritima [Ta	97.77
d1zema1	260	Xylitol dehydrogenase {Gluconobacter oxydans [TaxI	97.72
d1cyda_	242	Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1	97.72
d1lssa_	132	Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax	97.71
d1ulsa_	242	beta-keto acyl carrier protein reductase {Thermus	97.69
d2a4ka1	241	beta-keto acyl carrier protein reductase {Thermus	97.69
d1yb1a_	244	17-beta-hydroxysteroid dehydrogenase type XI {Huma	97.65
d2ae2a_	259	Tropinone reductase {Jimsonweed (Datura stramonium	97.65
d1iy8a_	258	Levodione reductase {Corynebacterium aquaticum [Ta	97.62
d1xg5a_	257	Putative dehydrogenase ARPG836 (MGC4172) {Human (H	97.62
d1ydea1	250	Retinal dehydrogenase/reductase 3 {Human (Homo sap	97.61
d1npya1	167	Shikimate 5-dehydrogenase-like protein HI0607 {Hae	97.6
d1xq1a_	259	Tropinone reductase {Thale cress (Arabidopsis thal	97.6
d1i1na_	224	Protein-L-isoaspartyl O-methyltransferase {Human (	97.6
d1k2wa_	256	Sorbitol dehydrogenase {Rhodobacter sphaeroides [T	97.6
d2ag5a1	245	Dehydrogenase/reductase SDR family member 6, DHRS6	97.59
d1vbfa_	224	Protein-L-isoaspartyl O-methyltransferase {Sulfolo	97.58
d2c07a1	251	beta-keto acyl carrier protein reductase {Malaria	97.56
d2ew8a1	247	(s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb	97.56
d1nyta1	170	Shikimate 5-dehydrogenase AroE {Escherichia coli [	97.55
d2bgka1	268	Rhizome secoisolariciresinol dehydrogenase {Mayapp	97.53
d1bdba_	276	Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps	97.51
d1wmaa1	275	Carbonyl reductase/20beta-hydroxysteroid dehydroge	97.5
d1e5qa1	182	Saccharopine reductase {Rice blast fungus (Magnapo	97.49
d2jfga1	93	UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase	97.44
d2gdza1	254	15-hydroxyprostaglandin dehydrogenase, PGDH {Human	97.43
d1x1ta1	260	D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas	97.39
d1zk4a1	251	R-specific alcohol dehydrogenase {Lactobacillus br	97.36
d1xu9a_	269	11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom	97.35
d1ae1a_	258	Tropinone reductase {Jimsonweed (Datura stramonium	97.31
d2nxca1	254	PrmA-like protein TTHA0656 (TT0836) {Thermus therm	97.29
d1g8aa_	227	Fibrillarin homologue {Archaeon Pyrococcus horikos	97.27
d1r18a_	223	Protein-L-isoaspartyl O-methyltransferase {Fruit f	97.27
d1ulua_	256	Enoyl-ACP reductase {Thermus thermophilus [TaxId:	97.26
d1xkqa_	272	Hypothetical protein R05D8.7 {Caenorhabditis elega	97.26
d1yb2a1	250	Hypothetical protein Ta0852 {Thermoplasma acidophi	97.25
d1ja9a_	259	1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl	97.24
d1nkva_	245	Hypothetical Protein YjhP {Escherichia coli [TaxId	97.23
d1yxma1	297	Peroxisomal trans 2-enoyl CoA reductase {Human (Ho	97.23
d1gz6a_	302	(3R)-hydroxyacyl-CoA dehydrogenase domain of estra	97.22
d1vi2a1	182	Putative shikimate dehydrogenase YdiB {Escherichia	97.22
d1pjqa1	113	Siroheme synthase CysG, domain 1 {Salmonella typhi	97.2
d1li4a1	163	S-adenosylhomocystein hydrolase {Human (Homo sapie	97.2
d1pjza_	201	Thiopurine S-methyltransferase {Pseudomonas syring	97.19
d1hdoa_	205	Biliverdin IX beta reductase {Human (Homo sapiens)	97.19
d1g0oa_	272	1,3,8-trihydroxynaphtalene reductase (THNR, naphto	97.19
d1fmca_	255	7-alpha-hydroxysteroid dehydrogenase {Escherichia	97.18
d1h5qa_	260	Mannitol dehydrogenase {Mushroom (Agaricus bisporu	97.17
d1dhra_	236	Dihydropteridin reductase (pteridine reductase) {R	97.17
d2rhca1	257	beta-keto acyl carrier protein reductase {Streptom	97.15
d1spxa_	264	Glucose dehydrogenase (5l265) {Nematode (Caenorhab	97.15
d2hmva1	134	Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}	97.15
d1bg6a2	184	N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A	97.12
d1xhla_	274	Hypothetical protein F25D1.5 {Caenorhabditis elega	97.12
d1w6ua_	294	2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H	97.09
d1ooea_	235	Dihydropteridin reductase (pteridine reductase) {N	97.06
d2bd0a1	240	Bacterial sepiapterin reductase {Chlorobium tepidu	97.05
d1i9ga_	264	Probable methyltransferase Rv2118c {Mycobacterium	97.02
d1o5ia_	234	beta-keto acyl carrier protein reductase {Thermoto	96.99
d1p77a1	171	Shikimate 5-dehydrogenase AroE {Haemophilus influe	96.94
d1v8ba1	163	S-adenosylhomocystein hydrolase {Plasmodium falcip	96.93
d1xxla_	234	Hypothetical protein YcgJ {Bacillus subtilis [TaxI	96.92
d1gega_	255	meso-2,3-butanediol dehydrogenase {Klebsiella pneu	96.91
d1kpia_	291	CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}	96.89
d1zmta1	252	Halohydrin dehalogenase HheC {Agrobacterium tumefa	96.88
d1kpga_	285	CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}	96.88
d1geea_	261	Glucose dehydrogenase {Bacillus megaterium [TaxId:	96.88
d1o54a_	266	Hypothetical protein TM0748 {Thermotoga maritima [	96.86
d2fk8a1	280	Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri	96.84
d2o57a1	282	Putative sarcosine dimethylglycine methyltransfera	96.81
d2bzga1	229	Thiopurine S-methyltransferase {Human (Homo sapien	96.81
d1edoa_	244	beta-keto acyl carrier protein reductase {Oil seed	96.8
d2f1ka2	165	Prephenate dehydrogenase TyrA {Synechocystis sp. p	96.73
d1l3ia_	186	Precorrin-6Y methyltransferase (CbiT) {Archaeon Me	96.71
d1yqga2	152	Pyrroline-5-carboxylate reductase ProC {Neisseria	96.61
d1g8sa_	230	Fibrillarin homologue {Archaeon Methanococcus jann	96.6
d1uzma1	237	beta-keto acyl carrier protein reductase {Mycobact	96.59
d1yo6a1	250	Putative carbonyl reductase sniffer {Caenorhabditi	96.59
d1sbya1	254	Drosophila alcohol dehydrogenase {Fly (Drosophila	96.51
d2o23a1	248	Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho	96.51
d1vl5a_	231	Hypothetical protein BH2331 {Bacillus halodurans [	96.49
d1nt2a_	209	Fibrillarin homologue {Archaeon Archaeoglobus fulg	96.48
d2b25a1	324	Hypothetical protein FLJ20628 {Human (Homo sapiens	96.46
d2avna1	246	Hypothetical methyltransferase TM1389 {Thermotoga	96.45
d1zx0a1	229	Guanidinoacetate methyltransferase {Human (Homo sa	96.43
d1ve3a1	226	Hypothetical protein PH0226 {Archaeon Pyrococcus h	96.37
d2ahra2	152	Pyrroline-5-carboxylate reductase ProC {Streptococ	96.31
d1b0aa1	166	Methylenetetrahydrofolate dehydrogenase/cyclohydro	96.25
d1qsga_	258	Enoyl-ACP reductase {Escherichia coli [TaxId: 562]	96.23
d1oaaa_	259	Sepiapterin reductase {Mouse (Mus musculus) [TaxId	96.2
d1ygya1	184	Phosphoglycerate dehydrogenase {Mycobacterium tube	96.19
d1c1da1	201	Phenylalanine dehydrogenase {Rhodococcus sp., M4 [	96.17
d2q46a1	252	Hypothetical protein At5g02240 (T7H20_290) {Thale	96.15
d1u2za_	406	Catalytic, N-terminal domain of histone methyltran	96.09
d2pd4a1	274	Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2	96.08
d1mx3a1	193	Transcription corepressor CtbP {Human (Homo sapien	96.04
d1qp8a1	181	Putative formate dehydrogenase {Archaeon Pyrobacul	96.04
d2h7ma1	268	Enoyl-ACP reductase {Mycobacterium tuberculosis, T	96.03
d2g5ca2	171	Prephenate dehydrogenase TyrA {Aquifex aeolicus [T	95.99
d1jtva_	285	Human estrogenic 17beta-hydroxysteroid dehydrogena	95.96
d1p91a_	268	rRNA methyltransferase RlmA {Escherichia coli [Tax	95.95
d1id1a_	153	Rck domain from putative potassium channel Kch {Es	95.87
d1a4ia1	170	Methylenetetrahydrofolate dehydrogenase/cyclohydro	95.82
d1j4aa1	197	D-lactate dehydrogenase {Lactobacillus helveticus	95.81
d1wzna1	251	Hypothetical methyltransferase PH1305 {Archaeon Py	95.8
d1vpda2	161	Hydroxyisobutyrate dehydrogenase {Salmonella typhi	95.7
d1dxya1	199	D-2-hydroxyisocaproate dehydrogenase {Lactobacillu	95.69
d1kjqa2	111	Glycinamide ribonucleotide transformylase PurT, N-	95.69
d1xvaa_	292	Glycine N-methyltransferase {Rat (Rattus norvegicu	95.58
d1leha1	230	Leucine dehydrogenase {Bacillus sphaericus [TaxId:	95.56
d1im8a_	225	Hypothetical protein HI0319 (YecO) {Haemophilus in	95.54
d1ks9a2	167	Ketopantoate reductase PanE {Escherichia coli [Tax	95.53
d1p3da1	96	UDP-N-acetylmuramate-alanine ligase MurC {Haemophi	95.53
d1r0ka2	150	1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z	95.47
d1snya_	248	Carbonyl reductase sniffer {Fruit fly (Drosophila	95.33
d2fr1a1	259	Erythromycin synthase, eryAI, 1st ketoreductase mo	95.33
d1gdha1	191	D-glycerate dehydrogenase {Hyphomicrobium methylov	95.28
d3cuma2	162	Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru	95.24
d1y1pa1	342	Aldehyde reductase II {Sporobolomyces salmonicolor	95.23
d2bkaa1	232	TAT-interacting protein TIP30 {Human (Homo sapiens	95.21
d2czca2	172	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	95.14
d2naca1	188	Formate dehydrogenase {Pseudomonas sp., strain 101	95.0
d2i6ga1	198	Putative methyltransferase TehB {Salmonella typhim	94.93
d1b7go1	178	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	94.92
d1j6ua1	89	UDP-N-acetylmuramate-alanine ligase MurC {Thermoto	94.87
d1mxha_	266	Dihydropteridin reductase (pteridine reductase) {T	94.75
d1nvta1	177	Shikimate 5-dehydrogenase AroE {Archaeon Methanoco	94.73
d2c5aa1	363	GDP-mannose-3', 5'-epimerase {Thale cress (Arabido	94.7
d2pgda2	176	6-phosphogluconate dehydrogenase {Sheep (Ovis orie	94.68
d2pv7a2	152	Prephenate dehydrogenase TyrA {Haemophilus influen	94.61
d1nw3a_	328	Catalytic, N-terminal domain of histone methyltran	94.6
d2fyta1	311	Protein arginine N-methyltransferase 3, PRMT3 {Hum	94.56
d1y8ca_	246	Putative methyltransferase CAC2371 {Clostridium ac	94.52
d1qyda_	312	Pinoresinol-lariciresinol reductase {Giant arborvi	94.47
d1ydwa1	184	Probable oxidoreductase At4g09670 {Thale cress (Ar	94.37
d1gtea4	196	Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su	94.3
d1iy9a_	274	Spermidine synthase {Bacillus subtilis [TaxId: 142	94.26
d1ri5a_	252	mRNA cap (Guanine N-7) methyltransferase {Fungus (	94.22
d1sc6a1	188	Phosphoglycerate dehydrogenase {Escherichia coli [	94.2
d1mo9a2	121	NADH-dependent 2-ketopropyl coenzyme M oxidoreduct	94.13
d3etja2	78	N5-carboxyaminoimidazole ribonucleotide synthetase	94.06
d2fy8a1	129	Potassium channel-related protein MthK {Archaeon M	94.05
d1xtpa_	254	Hypothetical protein Lmaj004091aaa (LmjF30.0810) {	94.01
d2ex4a1	222	Adrenal gland protein AD-003 (C9orf32) {Human (Hom	93.99
d1ps9a3	179	2,4-dienoyl-CoA reductase, middle domain {Escheric	93.98
d2voua1	265	Dihydroxypyridine hydroxylase DhpH {Arthrobacter n	93.95
d1f0ya2	192	Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum	93.92
d2as0a2	324	Hypothetical protein PH1915, middle and C-terminal	93.92
d2b69a1	312	UDP-glucuronate decarboxylase 1 {Human (Homo sapie	93.9
d1rkxa_	356	CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc	93.85
d1seza1	373	Protoporphyrinogen oxidase {Tobacco (Nicotiana tab	93.83
d1xeaa1	167	Putative oxidoreductase VCA1048 {Vibrio cholerae [	93.77
d1jaya_	212	Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae	93.68
d1n1ea2	189	Glycerol-3- phosphate dehydrogenase {Trypanosome (	93.63
d1dusa_	194	Hypothetical protein MJ0882 {Archaeon Methanococcu	93.58
d1ebda2	117	Dihydrolipoamide dehydrogenase {Bacillus stearothe	93.57
d1cf2o1	171	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	93.55
d2p7ia1	225	Hypothetical protein ECA1738 {Erwinia carotovora [	93.53
d1nhpa2	123	NADH peroxidase {Enterococcus faecalis [TaxId: 135	93.52
d1ldna1	148	Lactate dehydrogenase {Bacillus stearothermophilus	93.5
d1e7wa_	284	Dihydropteridin reductase (pteridine reductase) {L	93.42
d2i76a2	153	Hypothetical protein TM1727 {Thermotoga maritima [	93.4
d1nvmb1	157	Acetaldehyde dehydrogenase (acylating) {Pseudomona	93.38
d1d7ya2	121	NADH-dependent ferredoxin reductase, BphA4 {Pseudo	93.21
d2bhsa1	292	O-acetylserine sulfhydrylase (Cysteine synthase) {	93.21
d2frna1	260	Hypothetical protein PH0793 {Pyrococcus horikoshii	93.2
d2gh1a1	281	Methyltransferase BC2162 {Bacillus cereus [TaxId:	93.18
d1uira_	312	Spermidine synthase {Thermus thermophilus [TaxId:	93.18
d1yl7a1	135	Dihydrodipicolinate reductase {Mycobacterium tuber	93.13
d1tw3a2	253	Carminomycin 4-O-methyltransferase {Streptomyces p	93.12
d1oria_	316	Protein arginine N-methyltransferase 1, PRMT1 {Rat	93.09
d1uh5a_	329	Enoyl-ACP reductase {Malaria parasite (Plasmodium	93.09
d1g6q1_	328	Arginine methyltransferase, HMT1 {Baker's yeast (S	93.08
d1onfa2	117	Glutathione reductase {Plasmodium falciparum [TaxI	93.05
d1q0qa2	151	1-deoxy-D-xylulose-5-phosphate reductoisomerase {E	92.98
d1wxxa2	318	Hypothetical protein TTHA1280, middle and C-termin	92.97
d2o07a1	285	Spermidine synthase {Human (Homo sapiens) [TaxId:	92.97
d1orra_	338	CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId:	92.96
d1edza1	171	Methylenetetrahydrofolate dehydrogenase/cyclohydro	92.84
d1djqa3	233	Trimethylamine dehydrogenase, middle domain {Methy	92.81
d1mlda1	144	Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982	92.77
d1gesa2	116	Glutathione reductase {Escherichia coli [TaxId: 56	92.74
d1qyca_	307	Phenylcoumaran benzylic ether reductase {Loblolly	92.66
d1i24a_	393	Sulfolipid biosynthesis protein SQD1 {Thale cress	92.65
d1mv8a2	202	GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos	92.48
d1pgja2	178	6-phosphogluconate dehydrogenase {Trypanosoma bruc	92.46
d1mjfa_	276	Putative spermidine synthetase PF0127 (SpeE) {Arch	92.43
d1c0pa1	268	D-aminoacid oxidase, N-terminal domain {Rhodotorul	92.41
d1v59a2	122	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	92.38
d3lada2	119	Dihydrolipoamide dehydrogenase {Azotobacter vinela	92.32
d1kyqa1	150	Bifunctional dehydrogenase/ferrochelatase Met8p, N	92.32
d1xj5a_	290	Spermidine synthase {Thale cress (Arabidopsis thal	92.27
d1wdka3	186	Fatty oxidation complex alpha subunit, middle doma	92.21
d1uaya_	241	Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t	92.2
d1vl0a_	281	DTDP-4-dehydrorhamnose reductase RfbD {Clostridium	92.15
d1udca_	338	Uridine diphosphogalactose-4-epimerase (UDP-galact	92.13
d2b2ca1	312	Spermidine synthase {Caenorhabditis elegans [TaxId	92.01
d2iida1	370	L-aminoacid oxidase {Malayan pit viper (Calloselas	91.99
d1q1ra2	133	Putidaredoxin reductase {Pseudomonas putida [TaxId	91.94
d1lvla2	115	Dihydrolipoamide dehydrogenase {Pseudomonas putida	91.77
d1xgka_	350	Negative transcriptional regulator NmrA {Aspergill	91.72
d1txga2	180	Glycerol-3- phosphate dehydrogenase {Archaeoglobus	91.7
d3grsa2	125	Glutathione reductase {Human (Homo sapiens) [TaxId	91.69
d1ws6a1	171	Methyltransferase TTHA0928 {Thermus thermophilus [	91.69
d1jbqa_	355	Cystathionine beta-synthase {Human (Homo sapiens)	91.68
d1ojta2	125	Dihydrolipoamide dehydrogenase {Neisseria meningit	91.67
d1dxla2	123	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	91.66
d1jw9b_	247	Molybdenum cofactor biosynthesis protein MoeB {Esc	91.56
d1inla_	295	Spermidine synthase {Thermotoga maritima [TaxId: 2	91.45
d1susa1	227	Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag	91.29
d1pzga1	154	Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5	91.27
d1k0ia1	292	p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a	91.22
d1z45a2	347	Uridine diphosphogalactose-4-epimerase (UDP-galact	91.21
d1h6va2	122	Mammalian thioredoxin reductase {Rat (Rattus norve	91.18
d1vm6a3	128	Dihydrodipicolinate reductase {Thermotoga maritima	91.14
d1v9la1	242	Glutamate dehydrogenase {Pyrobaculum islandicum [T	91.1
d2dw4a2	449	Lysine-specific histone demethylase 1, LSD1 {Human	91.06
d1fjha_	257	3-alpha-hydroxysteroid dehydrogenase {Comamonas te	91.05
d2bi7a1	314	UDP-galactopyranose mutase, N-terminal domain {Kle	90.97
d2blla1	342	Polymyxin resistance protein ArnA (PrmI) {Escheric	90.86
d1a5za1	140	Lactate dehydrogenase {Thermotoga maritima [TaxId:	90.83
d1db3a_	357	GDP-mannose 4,6-dehydratase {Escherichia coli [Tax	90.54
d2gqfa1	253	Hypothetical protein HI0933 {Haemophilus influenza	90.49
d2bcgg1	297	Guanine nucleotide dissociation inhibitor, GDI {Ba	90.43
d1ez4a1	146	Lactate dehydrogenase {Lactobacillus pentosus [Tax	90.38
d3c96a1	288	Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId:	90.37
d2i0za1	251	Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]	90.32
d1b5qa1	347	Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}	90.3
d2g82a1	168	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	90.06
d1qzza2	256	Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu	90.02
d1h6da1	221	Glucose-fructose oxidoreductase, N-terminal domain	90.0
d1fl2a1	184	Alkyl hydroperoxide reductase subunit F (AhpF), C-	89.85
d2avda1	219	COMT domain-containing protein 1, COMTD1 {Human (H	89.79
d1xhca2	122	NADH oxidase /nitrite reductase {Pyrococcus furios	89.74
d1tlta1	164	Virulence factor MviM {Escherichia coli [TaxId: 56	89.62
d1i0za1	160	Lactate dehydrogenase {Human (Homo sapiens), heart	89.6
d1x7da_	340	Ornithine cyclodeaminase {Pseudomonas putida [TaxI	89.5
d1i36a2	152	Conserved hypothetical protein MTH1747 {Archaeon M	89.46
d1d5ta1	336	Guanine nucleotide dissociation inhibitor, GDI {Co	89.41
d2ivda1	347	Protoporphyrinogen oxidase {Myxococcus xanthus [Ta	89.37
d1dssg1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	89.35
d1fcda1	186	Flavocytochrome c sulfide dehydrogenase, FCSD, fla	89.3
d1dxla1	221	Dihydrolipoamide dehydrogenase {Garden pea (Pisum	89.21
d1zh8a1	181	Hypothetical protein TM0312 {Thermotoga maritima [	89.19
d1omoa_	320	Archaeal alanine dehydrogenase {Archaeon Archaeogl	89.17
d1gesa1	217	Glutathione reductase {Escherichia coli [TaxId: 56	89.15
d1rpna_	321	GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos	89.09
d1w4xa1	298	Phenylacetone monooxygenase {Thermobifida fusca [T	89.08
d1ne2a_	197	Hypothetical protein Ta1320 {Archaeon Thermoplasma	89.04
d2b78a2	317	Hypothetical protein SMu776, middle and C-terminal	88.89
d1d7oa_	297	Enoyl-ACP reductase {Oil seed rape (Brassica napus	88.84
d1trba1	190	Thioredoxin reductase {Escherichia coli [TaxId: 56	88.79
d1bgva1	255	Glutamate dehydrogenase {Clostridium symbiosum [Ta	88.52
d1llda1	143	Lactate dehydrogenase {Bifidobacterium longum, str	88.5
d1ryia1	276	Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}	88.5
d2dula1	375	N(2),N(2)-dimethylguanosine tRNA methyltransferase	88.39
d1j5pa4	132	Hypothetical protein TM1643 {Thermotoga maritima [	88.12
d1v59a1	233	Dihydrolipoamide dehydrogenase {Baker's yeast (Sac	88.01
d1hwxa1	293	Glutamate dehydrogenase {Cow (Bos taurus) [TaxId:	87.88
d1hyha1	146	L-2-hydroxyisocapronate dehydrogenase, L-HICDH {La	87.87
d1q1ra1	185	Putidaredoxin reductase {Pseudomonas putida [TaxId	87.86
d2a35a1	212	Hypothetical protein PA4017 {Pseudomonas aeruginos	87.8
d2fcaa1	204	tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil	87.77
d1i8ta1	298	UDP-galactopyranose mutase, N-terminal domain {Esc	87.67
d1lvla1	220	Dihydrolipoamide dehydrogenase {Pseudomonas putida	87.59
d2v5za1	383	Monoamine oxidase B {Human (Homo sapiens) [TaxId:	87.57
d1ebda1	223	Dihydrolipoamide dehydrogenase {Bacillus stearothe	87.34
d2g72a1	263	Phenylethanolamine N-methyltransferase, PNMTase {H	87.33
d1ojta1	229	Dihydrolipoamide dehydrogenase {Neisseria meningit	87.13
d1ojua1	142	Malate dehydrogenase {Archaeon Archaeoglobus fulgi	87.1
d2ldxa1	159	Lactate dehydrogenase {Mouse (Mus musculus) [TaxId	86.77
d1y0pa2	308	Flavocytochrome c3 (respiratory fumarate reductase	86.63
d2gf3a1	281	Sarcosine oxidase {Bacillus sp., strain b0618 [Tax	86.56
d1pn0a1	360	Phenol hydroxylase {Soil-living yeast (Trichosporo	86.33
d1u8fo1	169	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	86.07
d1jqea_	280	Histamine methyltransferase {Human (Homo sapiens)	86.02
d1y7la1	310	O-acetylserine sulfhydrylase (Cysteine synthase) {	85.94
d1vdca1	192	Thioredoxin reductase {Mouse-ear cress (Arabidopsi	85.81
d3grsa1	221	Glutathione reductase {Human (Homo sapiens) [TaxId	85.71
d1djqa2	156	Trimethylamine dehydrogenase, C-terminal domain {M	85.64
d1gtea3	153	Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su	85.3
d2nvwa1	237	Galactose/lactose metabolism regulatory protein GA	85.22
d2b4ro1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	84.9
d1b26a1	234	Glutamate dehydrogenase {Thermotoga maritima [TaxI	84.87
d2gv8a1	335	Flavin-dependent monoxygenase SPBP16F5.08c {Schizo	84.87
d3lada1	229	Dihydrolipoamide dehydrogenase {Azotobacter vinela	84.79
d1h6va1	235	Mammalian thioredoxin reductase {Rat (Rattus norve	84.75
d1n7ha_	339	GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop	84.72
d1vlma_	208	Possible histamine N-methyltransferase TM1293 {The	84.66
d1qo8a2	317	Flavocytochrome c3 (respiratory fumarate reductase	84.57
d1y6ja1	142	Lactate dehydrogenase {Clostridium thermocellum [T	84.09
d1cjca2	230	Adrenodoxin reductase of mitochondrial p450 system	83.87
d1f06a1	170	Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb	83.63
d1gado1	166	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.34
d1t2da1	150	Lactate dehydrogenase {Malaria parasite (Plasmodiu	83.23
d1d4ca2	322	Flavocytochrome c3 (respiratory fumarate reductase	83.19
d1t2aa_	347	GDP-mannose 4,6-dehydratase {Human (Homo sapiens)	83.11
d1sqga2	284	Ribosomal RNA small subunit methyltransferase B, R	83.1
d1m6ya2	192	TM0872, methyltransferase domain {Thermotoga marit	83.07
d1obfo1	173	Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {	83.05
d1sb8a_	341	UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo	82.98
d1tdja1	331	Threonine deaminase {Escherichia coli [TaxId: 562]	82.96
d1lqta2	239	Ferredoxin:NADP reductase FprA {Mycobacterium tube	82.92
d2cl5a1	214	Catechol O-methyltransferase, COMT {Rat (Rattus no	82.66
d2bs2a2	336	Fumarate reductase {Wolinella succinogenes [TaxId:	82.64
d1onfa1	259	Glutathione reductase {Plasmodium falciparum [TaxI	82.57
d1rp0a1	278	Thiazole biosynthetic enzyme Thi4 {Thale cress(Ara	82.52
d1pj5a2	305	N,N-dimethylglycine oxidase {Arthrobacter globifor	82.42
d1p3ha_	99	Chaperonin-10 (GroES) {Mycobacterium tuberculosis	81.75
d1fcja_	302	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.67
d1ek6a_	346	Uridine diphosphogalactose-4-epimerase (UDP-galact	81.48
d1z7wa1	320	O-acetylserine sulfhydrylase (Cysteine synthase) {	81.28
d1dlja2	196	UDP-glucose dehydrogenase (UDPGDH) {Streptococcus	81.27
d1np3a2	182	Class I ketol-acid reductoisomerase (KARI) {Pseudo	81.18
d2cvoa1	183	Putative semialdehyde dehydrogenase {Rice (Oryza s	81.06
d1feca2	117	Trypanothione reductase {Crithidia fasciculata [Ta	81.05
d1ixka_	313	Hypothetical methyltransferase PH1374 {Archaeon Py	80.97
d1t4ba1	146	Aspartate beta-semialdehyde dehydrogenase {Escheri	80.91
d2hjsa1	144	Usg-1 protein homolog PA3116 {Pseudomonas aerugino	80.53

>d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=100.00  E-value=5.5e-35  Score=244.75  Aligned_cols=182  Identities=20%  Similarity=0.272  Sum_probs=158.9

Q ss_pred             ccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCC
Q 019199            5 TASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         5 ~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      ..+|++++.++++...++++++++.|+|++||||||+.++|+|++|++.+.|......+|.++|||++|+|+++|+++.+
T Consensus         4 ~~~~~~kAav~~~~~~pl~i~ev~~P~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G~v~~vG~~v~~   83 (199)
T d1cdoa1           4 GKVIKCKAAVAWEANKPLVIEEIEVDVPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAGIVESVGPGVTE   83 (199)
T ss_dssp             TSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEEEEEEECTTCCS
T ss_pred             CCceEEEEEEEecCCCCcEEEEEECCCCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccceEEEEEcCCCce
Confidence            46899999999877788999999999999999999999999999999999987776788999999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCcccccc-ccccCCC-------------CccCCcceeEEEEecceEEEcC
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF-NAIDADG-------------TITKGGYSSYIVVHERYCYKIA  150 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~-~~~~~~~-------------~~~~g~~~~~~~~~~~~~~~~P  150 (344)
                      |++||||++.+. .+|++|.+|..|.++.|.+..... .+....+             ....|+|+||+++++.+++++|
T Consensus        84 ~~~GdrV~~~~~-~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~~~~~~~iP  162 (199)
T d1cdoa1          84 FQPGEKVIPLFI-SQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVNQIAVAKID  162 (199)
T ss_dssp             CCTTCEEEECSS-CCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEEGGGEEECC
T ss_pred             ecCCCEEEEeee-ccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEchHHEEECC
Confidence            999999977654 489999999999999997753221 1111111             1125999999999999999999


Q ss_pred             CCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          151 NDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       151 ~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      ++++++++|++.+++.|+++++...++.+.|++|||+
T Consensus       163 ~~~~~~~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~  199 (199)
T d1cdoa1         163 PSVKLDEFITHRMPLESVNDAIDLMKHGKCIRTVLSL  199 (199)
T ss_dssp             TTSCCGGGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred             CCCCHHHHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence            9999999999999999999999998888899999984

>d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=1.5e-34  Score=239.77  Aligned_cols=183  Identities=28%  Similarity=0.455  Sum_probs=157.4

Q ss_pred             cccccceeeeeecCC--CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCC
Q 019199            4 ETASKDCLGWAARDP--SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN   81 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~--~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   81 (344)
                      |+.+.++++|...++  ...+++.+++.++++++|||||+.|+|||++|++.+.|..+..++|+++|||++|+|+++|++
T Consensus         1 m~~P~~~ka~~~~~~~~~~~~~~~~~~p~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G~Vv~vG~~   80 (192)
T d1piwa1           1 MSYPEKFEGIAIQSHEDWKNPKKTKYDPKPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVGKVVKLGPK   80 (192)
T ss_dssp             CCTTTCEEEEEECCSSSTTSCEEEEECCCCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEEEEEEECTT
T ss_pred             CCCCceeEEEEEeCCCcCCcceEeeccCCCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCcccccccchhhcccc
Confidence            667778888887544  344566677766789999999999999999999999998887889999999999999999998


Q ss_pred             C-CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccc
Q 019199           82 V-SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAP  160 (344)
Q Consensus        82 ~-~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~  160 (344)
                      + +.+++||||.+.+....|+.|.+|..|.++.|.+....+.+....|...+|+|+||+++++++++++|+++++++|+.
T Consensus        81 v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~iP~~l~~e~Aal  160 (192)
T d1piwa1          81 SNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPIPENIWVETLPV  160 (192)
T ss_dssp             CCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEECCTTCCEEEEES
T ss_pred             cccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEECCCCCCHHHHHH
Confidence            7 569999999988888889999999999999999987666666666777889999999999999999999999988765


Q ss_pred             cchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          161 LLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       161 l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      +.+.+.|||+++.+ +.+++|++|||.
T Consensus       161 ~~~~~~ta~~~l~~-~~vk~g~~Vvv~  186 (192)
T d1piwa1         161 GEAGVHEAFERMEK-GDVRYRFTLVGY  186 (192)
T ss_dssp             SHHHHHHHHHHHHH-TCCSSEEEEECC
T ss_pred             HHHHHHHHHHHHHH-hCCCCCCEEEEE
Confidence            55557899999975 456999999874

>d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=100.00  E-value=9.7e-35  Score=239.34  Aligned_cols=168  Identities=22%  Similarity=0.344  Sum_probs=145.9

Q ss_pred             eeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           13 WAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        13 ~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      .++++ +++++++++++|+|+++|||||+.++|||++|++.+++...   ..+.|.++|||++|+|+++|+++++|++||
T Consensus         5 AVl~g-~~~l~~~e~~~P~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~Vv~vG~~v~~~~~Gd   83 (178)
T d1e3ja1           5 AVLYK-QNDLRLEQRPIPEPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASGTVVKVGKNVKHLKKGD   83 (178)
T ss_dssp             EEEEE-TTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEEEEEEECTTCCSCCTTC
T ss_pred             EEEEc-CCcEEEEEeECCCCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccceEEEecCcccCCCCCCC
Confidence            34453 56799999999999999999999999999999988876432   345688999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|++.+.. .|+.|.+|..|..+.|++..+...      ...+|+|+||+.+|+++++++|+++++++++++++.+.|||
T Consensus        84 rV~~~~~~-~~~~c~~c~~g~~~~c~~~~~~~~------~~~~G~~aey~~v~~~~~~~iP~~~~~~~aa~~~~~~~ta~  156 (178)
T d1e3ja1          84 RVAVEPGV-PCRRCQFCKEGKYNLCPDLTFCAT------PPDDGNLARYYVHAADFCHKLPDNCNVKQLVTHSFKLEQTV  156 (178)
T ss_dssp             EEEECCEE-CCSSSHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTCCCGGGEEEEEEGGGHH
T ss_pred             EEEECccc-ccCCccccccCCccccccccceec------cccccccceeeeecccceeeCCCCCCHHHHHHHHhHHHHHH
Confidence            99887654 899999999999999987644321      13468999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEECC
Q 019199          170 TPMMRHKMNQPGKSLGVIGL  189 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Ga  189 (344)
                      +++.+... ++|++|+|+|+
T Consensus       157 ~a~~~~~~-~~g~~VlVig~  175 (178)
T d1e3ja1         157 DAFEAARK-KADNTIKVMIS  175 (178)
T ss_dssp             HHHHHHHH-CCTTCSEEEEE
T ss_pred             HHHHHhCC-CCCCEEEEEcc
Confidence            99976655 99999999864

>d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=100.00  E-value=3.9e-34  Score=238.69  Aligned_cols=181  Identities=20%  Similarity=0.244  Sum_probs=156.1

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      .+||++++++.++.++|+++++|.|+|+++|||||+.++|||++|+++++|......+|.++|||++|+|+++|+.+..+
T Consensus         3 ~~~~~kAav~~~~g~~l~i~evp~P~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G~V~~vG~~V~~~   82 (197)
T d2fzwa1           3 EVIKCKAAVAWEAGKPLSIEEIEVAPPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAGIVESVGEGVTKL   82 (197)
T ss_dssp             CCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceeeEEEeecCCceec
Confidence            47889999998888889999999999999999999999999999999999987777889999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccc-cccccCC-------------CCccCCcceeEEEEecceEEEcCC
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDAD-------------GTITKGGYSSYIVVHERYCYKIAN  151 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~~-------------~~~~~g~~~~~~~~~~~~~~~~P~  151 (344)
                      ++||+|++.+.. +|+.|.+|..|.+..|.+.... ..+...+             +....|+|+||+++++.+++++|+
T Consensus        83 ~~GdrV~v~~~~-~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vvp~~~~~~vp~  161 (197)
T d2fzwa1          83 KAGDTVIPLYIP-QCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVADISVAKIDP  161 (197)
T ss_dssp             CTTCEEEECSSC-CCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGGEEECCT
T ss_pred             CCCCEEEEcccc-ccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEechHHEEECCC
Confidence            999999876654 8999999999999999874211 1111111             111248999999999999999999


Q ss_pred             CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      +++++++|++++++.|++.++.....-+.+++|||+
T Consensus       162 ~l~~~~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi  197 (197)
T d2fzwa1         162 LIKVDEFVTHNLSFDEINKAFELMHSGKSIRTVVKI  197 (197)
T ss_dssp             TSCSGGGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred             CCCHHHHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence            999999999999999999998766655788999874

>d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=100.00  E-value=1.3e-33  Score=231.95  Aligned_cols=173  Identities=24%  Similarity=0.379  Sum_probs=149.8

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCC
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      |+.+||  ++++.+...++++++++.|+|++||||||+.++|+|++|++.++|..+ ...+|.++|||++|+|+++|+++
T Consensus         2 ~P~tMk--A~v~~~~g~pl~l~evp~P~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G~V~~~G~~v   79 (175)
T d1llua1           2 LPQTMK--AAVVHAYGAPLRIEEVKVPLPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVGYVAAVGSGV   79 (175)
T ss_dssp             CCSEEE--EEEBCSTTSCCEEEEEECCCCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTC
T ss_pred             cchhcE--EEEEEeCCCCCEEEEeECCCCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceEEEEEeCCCc
Confidence            444554  555544455689999999999999999999999999999999999875 45789999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLL  162 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~  162 (344)
                      ++|++||||++.+....|+.|.+|..|.++.|.+....       |...+|+|+||+.+++++++++|+++++..++++.
T Consensus        80 ~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~-------G~~~~gg~aey~~v~~~~~~~iPd~l~~~~a~~~~  152 (175)
T d1llua1          80 TRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNT-------GYSVNGGYAEYVLADPNYVGILPKNVKATIHPGKL  152 (175)
T ss_dssp             CSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEECTTTSEECCTTCCCCEEEECG
T ss_pred             cccccCCEEEeccccccCCccccccCCccccccccccc-------ccccccccceEEEechHHEEECCCCCChhHHHHHH
Confidence            99999999998888888999999999999999886443       33467899999999999999999999999898888


Q ss_pred             hhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          163 CAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       163 ~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      +++.|+++.++ .+. .+|++|||+
T Consensus       153 ~~~~t~~~~~~-~g~-~~G~~VLVl  175 (175)
T d1llua1         153 DDINQILDQMR-AGQ-IEGRIVLEM  175 (175)
T ss_dssp             GGHHHHHHHHH-TTC-CSSEEEEEC
T ss_pred             hHHHHHHHHHH-hCC-CCCCEEEeC
Confidence            89999988875 445 579999984

>d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=100.00  E-value=3.8e-33  Score=234.34  Aligned_cols=179  Identities=23%  Similarity=0.304  Sum_probs=151.0

Q ss_pred             cccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199            4 ETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus         4 ~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      ...+|+++++++.++.++++++++++|+|+++||||||.++|||++|++.++|..+ ..+|.++|||++|+|+++|++++
T Consensus         3 ~~~~~~~KAaV~~~~g~pl~i~evp~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G~V~~vG~~V~   81 (202)
T d1e3ia1           3 QGKVIKCKAAIAWKTGSPLCIEEIEVSPPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAGIVESVGPGVT   81 (202)
T ss_dssp             TTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEEEEEEECTTCC
T ss_pred             CCCeEEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccceEEeeecCCce
Confidence            45688999999987777899999999999999999999999999999999998775 56799999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCcccccccccc------------------CCCCccCCcceeEEEEecce
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID------------------ADGTITKGGYSSYIVVHERY  145 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~------------------~~~~~~~g~~~~~~~~~~~~  145 (344)
                      ++++||+|++.+. ..|+.|.+|..|.++.|.+.........                  ..+....|+|+||+++++..
T Consensus        82 ~~~~GdrV~~~~~-~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey~~v~~~~  160 (202)
T d1e3ia1          82 NFKPGDKVIPFFA-PQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQYTVVSEAN  160 (202)
T ss_dssp             SCCTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSEEEEEGGG
T ss_pred             eccCCCEEEEEee-ccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEEEEEehhh
Confidence            9999999977665 5899999999999999987522111000                  00112248999999999999


Q ss_pred             EEEcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          146 CYKIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       146 ~~~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      ++++|++++++.++++.+++.++++++..   +++|++|.|+
T Consensus       161 l~~lP~~~~~~~~~~~~~~~~~~~~a~~~---~k~G~~V~vi  199 (202)
T d1e3ia1         161 LARVDDEFDLDLLVTHALPFESINDAIDL---MKEGKSIRTI  199 (202)
T ss_dssp             EEECCTTSCGGGGEEEEEEGGGHHHHHHH---HHTTCCSEEE
T ss_pred             EEECCCCCCHHHHHHHHHHHHHHHHHHHh---CCCCCEEEEE
Confidence            99999999999999999998888888753   3689998775

>d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=100.00  E-value=4e-33  Score=227.68  Aligned_cols=166  Identities=22%  Similarity=0.346  Sum_probs=144.9

Q ss_pred             eeeeecCCCCCccceeeccCCC-CCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAV-GSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      +++.+.+..++|++++++.|++ +++|||||+.|++||++|++.+.|...   .+.+|.++|||++|+|+++|+++++|+
T Consensus         1 kA~~~~~~g~pl~i~~v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G~V~~vG~~v~~~~   80 (171)
T d1h2ba1           1 KAARLHEYNKPLRIEDVDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVGYIEEVAEGVEGLE   80 (171)
T ss_dssp             CEEEESSTTSCCEEECCCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEEEEEEECTTCCSCC
T ss_pred             CEEEEEeCCCCCEEEEeeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeeeeeecccCCCCcCC
Confidence            3556655566699999999986 689999999999999999999888654   457899999999999999999999999


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||||++.+.. +|++|..|++|.++.|.+..+.       |....|+|+||++++++.++++|++++++.++++.+++.
T Consensus        81 ~GdrV~~~~~~-~cg~~~~c~~g~~~~c~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~aa~~~~~~~  152 (171)
T d1h2ba1          81 KGDPVILHPAV-TDGTCLACRAGEDMHCENLEFP-------GLNIDGGFAEFMRTSHRSVIKLPKDVRVEVDIHKLDEIN  152 (171)
T ss_dssp             TTCEEEECSCB-CCSCSHHHHTTCGGGCTTCBCB-------TTTBCCSSBSEEEECGGGEEECCTTCCCCEEEEEGGGHH
T ss_pred             CCCEEEEcCcc-CCCCcccccccccccccccccc-------eeecccccceeeeehhhcceecCCCCCHHHHHHHHhHHH
Confidence            99999887654 8999999999999999876543       334569999999999999999999999998999999999


Q ss_pred             HhHHHHHhccCCCCCCEEEE
Q 019199          167 TVYTPMMRHKMNQPGKSLGV  186 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI  186 (344)
                      |||+++.. ..+ .|++|||
T Consensus       153 ta~~al~~-~~~-~G~~VlI  170 (171)
T d1h2ba1         153 DVLERLEK-GEV-LGRAVLI  170 (171)
T ss_dssp             HHHHHHHT-TCC-SSEEEEE
T ss_pred             HHHHHHHh-cCC-CCCEEEe
Confidence            99999965 454 8999997

>d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=100.00  E-value=9.1e-33  Score=229.65  Aligned_cols=174  Identities=25%  Similarity=0.470  Sum_probs=143.1

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      .++++.+..+.+++|++++++.|+|++||||||+.++|+|++|++++.|..+ .++|.++|||++|+|+++|+++++|++
T Consensus         2 k~~~Aav~~~~g~~l~l~~v~~P~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G~V~~vG~~v~~~~v   80 (194)
T d1f8fa1           2 KDIIAAVTPCKGADFELQALKIRQPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSGIIEAIGPNVTELQV   80 (194)
T ss_dssp             EEEEEEEBCSTTCCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEEEEEEECTTCCSCCT
T ss_pred             ceeEEEEEcCCCCCcEEEEeeCCCCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEEEeeecCccceeEcc
Confidence            3456677766778899999999999999999999999999999999998775 578999999999999999999999999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCcc-ccccccccCCC---------------CccCCcceeEEEEecceEEEcCC
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARS-VYTFNAIDADG---------------TITKGGYSSYIVVHERYCYKIAN  151 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~-~~~~~~~~~~~---------------~~~~g~~~~~~~~~~~~~~~~P~  151 (344)
                      ||||+.. .. .|++|.+|++|.++.|++. ...+.+...+|               ....|+|+||.++++.+++++|+
T Consensus        81 GDrVv~~-~~-~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v~~~~~~~ip~  158 (194)
T d1f8fa1          81 GDHVVLS-YG-YCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALSRENNTVKVTK  158 (194)
T ss_dssp             TCEEEEC-CC-CCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEEEGGGEEEECT
T ss_pred             Cceeeee-cc-cccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEEehHHEEECCC
Confidence            9999554 33 7999999999999999874 11122211111               11247999999999999999999


Q ss_pred             CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEE
Q 019199          152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTV  209 (344)
Q Consensus       152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~  209 (344)
                      ++++.++                         +++.|+|++|++++|+++.+|++.++
T Consensus       159 ~i~~~~~-------------------------~~i~g~g~~g~~aiq~a~~~g~~~ii  191 (194)
T d1f8fa1         159 DFPFDQL-------------------------VKFYAFDEINQAAIDSRKGITLKPII  191 (194)
T ss_dssp             TCCGGGG-------------------------EEEEEGGGHHHHHHHHHHTSCSEEEE
T ss_pred             CCCcccE-------------------------EEEeCcHHHHHHHHHHHHHcCCCEEE
Confidence            9886543                         34567899999999999999995444

>d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=100.00  E-value=9.2e-33  Score=227.03  Aligned_cols=172  Identities=21%  Similarity=0.270  Sum_probs=140.4

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC----
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS----   83 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~----   83 (344)
                      ++++++++.+..++++++++++|+|+++||||||.++|||++|+++++|..+..++|+++|||++|+|+++|+.++    
T Consensus         3 ~k~kA~v~~~~~~pl~i~ev~~P~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G~V~~vG~~v~~~~~   82 (184)
T d1vj0a1           3 LKAHAMVLEKFNQPLVYKEFEISDIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAGRVVEVNGEKRDLNG   82 (184)
T ss_dssp             EEEEEEEBCSTTSCCEEEEEEECCCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEEEEEEESSCCBCTTS
T ss_pred             ceEEEEEEecCCCCcEEEEeeCCCCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeeeeeeEEecccccccc
Confidence            5667777766667799999999999999999999999999999999999887678999999999999999999886    


Q ss_pred             -CCCCCCEEEEeccccCCCCCccccCCCC-CCCCccc-cccccccCCCCccCCcceeEEEEe-cceEEEcCCCCCccccc
Q 019199           84 -RFKVGDHVGVGTYVNSCRDCEYCNDGLE-VHCARSV-YTFNAIDADGTITKGGYSSYIVVH-ERYCYKIANDYPLALAA  159 (344)
Q Consensus        84 -~~~~Gd~V~~~~~~~~c~~c~~~~~~~~-~~c~~~~-~~~~~~~~~~~~~~g~~~~~~~~~-~~~~~~~P~~~~~~~aa  159 (344)
                       ++++||+|++.+.. +|++|.+|+.|.. +.|++.. +.+..........+|+|+||+.++ +.+++++|++++.+++ 
T Consensus        83 ~~~~~Gd~V~~~~~~-~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~~ip~~l~~~~p-  160 (184)
T d1vj0a1          83 ELLKPGDLIVWNRGI-TCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLKVSEKITHRLP-  160 (184)
T ss_dssp             CBCCTTCEEEECSEE-CCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEEECTTCCEEEE-
T ss_pred             ccccceeeeEecccc-ccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEEECCCCCCHHHH-
Confidence             46899999876654 8999999999985 5687753 332222222335689999999996 6789999999997642 


Q ss_pred             ccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          160 PLLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       160 ~l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                           +.+|++++..... ++|++|||+
T Consensus       161 -----l~~A~~a~~~~~~-~~G~~VlI~  182 (184)
T d1vj0a1         161 -----LKEANKALELMES-REALKVILY  182 (184)
T ss_dssp             -----GGGHHHHHHHHHH-TSCSCEEEE
T ss_pred             -----HHHHHHHHHHhCC-CcCCEEEEe
Confidence                 3456777776665 999999997

>d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.98  E-value=2.5e-32  Score=223.94  Aligned_cols=163  Identities=41%  Similarity=0.659  Sum_probs=136.5

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      ++...++++++|++++++.|+|++||||||+.++|||++|++.+.|......+|+++|||++|+|+++|++++++++||+
T Consensus         2 ~a~~~~~~~~pl~i~ev~~P~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G~V~~vG~~V~~~~vGdr   81 (179)
T d1uufa1           2 KAVGAYSAKQPLEPMDITRREPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVGRVVAVGDQVEKYAPGDL   81 (179)
T ss_dssp             EEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEEEEEEECTTCCSCCTTCE
T ss_pred             eEEEEccCCCCCEEEEecCCCCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccccchhhccccccCCCCCE
Confidence            56666778888999999999999999999999999999999999998877889999999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCC-CCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDAD-GTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~-~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      |.+.+...+|++|.+|++|.++.|.+....+.+...+ +....|+|+||+++++++++++|++.....++   ..+.+++
T Consensus        82 V~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~ip~~~~~~~~a---~~l~~a~  158 (179)
T d1uufa1          82 VGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRIRVADIEMIRA---DQINEAY  158 (179)
T ss_dssp             EEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEECCCCCEEEECG---GGHHHHH
T ss_pred             EEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEECCCCCcChhHh---chhHHHH
Confidence            9998888899999999999999999875544443333 33457999999999999999999664333222   2445667


Q ss_pred             HHHHhcc
Q 019199          170 TPMMRHK  176 (344)
Q Consensus       170 ~~l~~~~  176 (344)
                      +++.+..
T Consensus       159 ~a~~~a~  165 (179)
T d1uufa1         159 ERMLRGD  165 (179)
T ss_dssp             HHHHTTC
T ss_pred             HHHHHhC
Confidence            7775543

>d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=2.2e-32  Score=226.21  Aligned_cols=170  Identities=19%  Similarity=0.305  Sum_probs=141.6

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC---CCCCCCCcccccceEEEEecCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG---DSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~---~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      +.+++++. +++.+++++++.|+|+++||||||.++|||++|++.+++...   ..++|.++|||++|+|+++|+++++|
T Consensus         7 ~~~a~V~~-gp~~l~l~evp~P~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G~V~~vG~~v~~~   85 (185)
T d1pl8a1           7 NNLSLVVH-GPGDLRLENYPIPEPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASGTVEKVGSSVKHL   85 (185)
T ss_dssp             CCEEEEEE-ETTEEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEEEEEEECTTCCSC
T ss_pred             CCEEEEEe-CCCeEEEEEeECCCCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeeeeEEEeccceeee
Confidence            45566665 457799999999999999999999999999999998875421   34678999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhh
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAG  165 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~  165 (344)
                      ++||+|++.+.. +|+.|.+|+.|.++.|.+..+...      ....|+|+||+++++++++++|+++++++++.++  +
T Consensus        86 ~~GdrV~~~~~~-~cg~c~~c~~G~~~~c~~~~~~g~------~~~~G~~aey~~~~~~~~~~lP~~~~~~~aa~~p--l  156 (185)
T d1pl8a1          86 KPGDRVAIEPGA-PRENDEFCKMGRYNLSPSIFFCAT------PPDDGNLCRFYKHNAAFCYKLPDNVKPLVTHRFP--L  156 (185)
T ss_dssp             CTTCEEEECSEE-CSSCCHHHHTTCGGGCTTCEETTB------TTBCCSCBSEEEEEGGGEEECCTTCGGGEEEEEE--G
T ss_pred             cccccceeccee-ccccchhhccchhchhccceeeec------ccccccceEEEEEchHHEEECCCCCCHHHHHHHH--H
Confidence            999999887755 799999999999999987644311      1346889999999999999999999999988655  3


Q ss_pred             hHhHHHHHhccCCCCCCEEEEECCC
Q 019199          166 ITVYTPMMRHKMNQPGKSLGVIGLG  190 (344)
Q Consensus       166 ~ta~~~l~~~~~~~~g~~vlI~Gag  190 (344)
                      .+|++++..... ++|++||| |+|
T Consensus       157 ~~a~~a~~~~~~-~~G~~VlI-g~G  179 (185)
T d1pl8a1         157 EKALEAFETFKK-GLGLKIML-KCD  179 (185)
T ss_dssp             GGHHHHHHHHHT-TCCSEEEE-ECC
T ss_pred             HHHHHHHHHhCC-CCCCEEEE-EeC
Confidence            456777766555 89999998 554

>d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.97  E-value=1.9e-34  Score=240.91  Aligned_cols=187  Identities=20%  Similarity=0.217  Sum_probs=151.4

Q ss_pred             eeeeecCCCCCccceeeccCCC-------CCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAV-------GSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVS   83 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~-------~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~   83 (344)
                      +++++. .++.+++++++.|++       .++||+||+.+++||++|++.++|..+ ..+|+++|||++|+|+++|++++
T Consensus         3 kA~v~~-~~~~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G~Vv~vG~~V~   80 (201)
T d1kola1           3 RGVVYL-GSGKVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITGEVIEKGRDVE   80 (201)
T ss_dssp             EEEEEE-ETTEEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEEEEEEECTTCC
T ss_pred             EEEEEe-CCCceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeeeeeeccccccc
Confidence            455554 346799999999864       469999999999999999999998776 57899999999999999999999


Q ss_pred             CCCCCCEEEEeccccCCCCCccccCCCCCCCCcccccc--ccccC-CCCccCCcceeEEEEec--ceEEEcCCCCCcccc
Q 019199           84 RFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTF--NAIDA-DGTITKGGYSSYIVVHE--RYCYKIANDYPLALA  158 (344)
Q Consensus        84 ~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~--~~~~~-~~~~~~g~~~~~~~~~~--~~~~~~P~~~~~~~a  158 (344)
                      +|++||||++.+ +.+|++|.+|++|+++.|.+.....  ..++. .....+|+|+||+++|.  .++++||++.++.++
T Consensus        81 ~~~vGdrV~v~~-~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~iPd~~~~~~~  159 (201)
T d1kola1          81 NLQIGDLVSVPF-NVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKLPDRDKAMEK  159 (201)
T ss_dssp             SCCTTCEEECCS-EECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEECSCHHHHHHT
T ss_pred             cccccceeEEee-eeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEECCCCCChHHH
Confidence            999999998766 4589999999999999886642111  11111 12356799999999985  369999999888888


Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL  205 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~  205 (344)
                      +++...+.++++++..... +.++    +|+|++|++++|+||++||
T Consensus       160 ~~~~~~~~~~~~a~~~~~~-~~g~----~g~G~vG~~~i~~ak~~GA  201 (201)
T d1kola1         160 INIAEVVGVQVISLDDAPR-GYGE----FDAGVPKKFVIDPHKTFSA  201 (201)
T ss_dssp             CCHHHHHTEEEECGGGHHH-HHHH----HHHTCSCEEEECTTCSSCC
T ss_pred             HHHHHHHHHHHHHHHhCCC-CCeE----EeeCHHHHHHHHHHHHcCC
Confidence            8888888888888766554 4443    5889999999999999886

>d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.97  E-value=4.3e-31  Score=220.91  Aligned_cols=181  Identities=19%  Similarity=0.299  Sum_probs=146.7

Q ss_pred             CccccccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCC
Q 019199            2 TSETASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHN   81 (344)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~   81 (344)
                      ++|-..+|++++++.+.++++++++++.|+|+++||||||.++|||++|++.++|..+ ..+|.++|||++|+|+++|++
T Consensus         1 ~~~~~~~k~KAavl~~~~~~l~i~ev~~P~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G~Vv~vG~~   79 (198)
T d2jhfa1           1 STAGKVIKCKAAVLWEEKKPFSIEEVEVAPPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAGIVESIGEG   79 (198)
T ss_dssp             CCTTSCEEEEEEEBCSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEEEEEEECTT
T ss_pred             CCCCCceEEEEEEEecCCCCCEEEEEECCCCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeEEEEecCcc
Confidence            4677899999999988888899999999999999999999999999999999999876 468999999999999999999


Q ss_pred             CCCCCCCCEEEEeccccCCCCCccccCCCCCCCCcccccccccc-C--------CC-----CccCCcceeEEEEecceEE
Q 019199           82 VSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAID-A--------DG-----TITKGGYSSYIVVHERYCY  147 (344)
Q Consensus        82 ~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~-~--------~~-----~~~~g~~~~~~~~~~~~~~  147 (344)
                      ++++++||+|++.+. .+|+.|.+|..|....|.+....+.... .        .+     ....|+|+||+++++.+++
T Consensus        80 v~~~~vGdrV~v~~~-~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~~~~~~  158 (198)
T d2jhfa1          80 VTTVRPGDKVIPLFT-PQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVDEISVA  158 (198)
T ss_dssp             CCSCCTTCEEEECSS-CCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEEGGGEE
T ss_pred             ccCcCCCCEEEEeee-ecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeCHHHeE
Confidence            999999999987665 4899999999999999988644321110 0        00     1124899999999999999


Q ss_pred             EcCCCCCcccccccchhhhHhHHHHHhccCCCCCCEEEEE
Q 019199          148 KIANDYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       148 ~~P~~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      ++|++++++.+++..+++.+...+   ...+++|++|+|+
T Consensus       159 ~~p~~~~~e~l~~~~~~~~~v~~g---~~~l~~G~~VaVi  195 (198)
T d2jhfa1         159 KIDAAFALDPLITHVLPFEKINEG---FDLLRSGESIRTI  195 (198)
T ss_dssp             ECCTTSCCGGGEEEEEEGGGHHHH---HHHHHTTCCSEEE
T ss_pred             ECCCCCCHHHHHHHHHHHHhhhhC---CceeeCCCEEEEE
Confidence            999999887766544443332222   1234789998875

>d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.97  E-value=6e-31  Score=215.21  Aligned_cols=167  Identities=29%  Similarity=0.529  Sum_probs=139.9

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCC-CCCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKH-GDSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~-~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      +++++.+..+++++++++.|+|++||||||+.++|||++|++.+++.. ....+|.++|||++|+|+++|+.++++++||
T Consensus         2 kA~v~~~~g~pl~i~~v~~P~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G~Vv~vG~~v~~~~vGd   81 (171)
T d1rjwa1           2 KAAVVEQFKEPLKIKEVEKPTISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVGIVEEVGPGVTHLKVGD   81 (171)
T ss_dssp             EEEEBSSTTSCCEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEEEEEEECTTCCSCCTTC
T ss_pred             eEEEEecCCCCcEEEEeECCCCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEEEEEEecccccCceeee
Confidence            455555555679999999999999999999999999999999887653 4567899999999999999999999999999


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|++.+....|+.|..|..+..+.|.+....       |...+|+|+||+++++++++++|++++++.| ++.+ ..+++
T Consensus        82 rV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------g~~~~G~~aey~~v~~~~~~~iP~~~~~e~A-~l~~-~~~~~  152 (171)
T d1rjwa1          82 RVGIPWLYSACGHCDYCLSGQETLCEHQKNA-------GYSVDGGYAEYCRAAADYVVKIPDNTIIEVQ-PLEK-INEVF  152 (171)
T ss_dssp             EEEECSEEECCSCSHHHHTTCGGGCTTCEEB-------TTTBCCSSBSEEEEEGGGCEECCTTCCEEEE-EGGG-HHHHH
T ss_pred             EEeeccccccccccccccCCCcccccccccc-------ceeccCccccceEecHHHEEECCCCCCHHHH-HHHH-HHHHH
Confidence            9998887778999999999999999876433       3345799999999999999999999988655 4543 45667


Q ss_pred             HHHHhccCCCCCCEEEEEC
Q 019199          170 TPMMRHKMNQPGKSLGVIG  188 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~G  188 (344)
                      +.+.+ +. -+|++|||+|
T Consensus       153 ~~~~~-~~-~~G~tVlViG  169 (171)
T d1rjwa1         153 DRMLK-GQ-INGRVVLTLE  169 (171)
T ss_dssp             HHHHT-TC-CSSEEEEECC
T ss_pred             HHHHh-cC-CCCCEEEEeC
Confidence            66654 33 3599999987

>d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.97  E-value=3e-31  Score=221.30  Aligned_cols=177  Identities=23%  Similarity=0.310  Sum_probs=143.0

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRF   85 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~   85 (344)
                      ..+++++++++++.++|+++++++|+|+++|||||+.|+|||++|+++++|..+ .++|.++|||++|+|+++|+++.++
T Consensus         5 ~~~~~KAav~~~~g~~l~i~ev~~P~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G~Vv~~G~~v~~~   83 (198)
T d1p0fa1           5 KDITCKAAVAWEPHKPLSLETITVAPPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVGVVESIGAGVTCV   83 (198)
T ss_dssp             SCEEEEEEEBSSTTSCCEEEEEEECCCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEEEEEEECTTCCSC
T ss_pred             CceEEEEEEEccCCCCCEEEEEECCCCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeeeeeeecCcccccC
Confidence            456888888887777899999999999999999999999999999999998775 5789999999999999999999999


Q ss_pred             CCCCEEEEeccccCCCCCccccCCCCCCCCccccc-cccccCCCC-------------ccCCcceeEEEEecceEEEcCC
Q 019199           86 KVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYT-FNAIDADGT-------------ITKGGYSSYIVVHERYCYKIAN  151 (344)
Q Consensus        86 ~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~-~~~~~~~~~-------------~~~g~~~~~~~~~~~~~~~~P~  151 (344)
                      ++||||++.+. .+|++|.+|++|.++.|.+.... +.+...++.             ...|+|+||+.+++..++++|+
T Consensus        84 ~~GdrV~~~~~-~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~~~~~~kip~  162 (198)
T d1p0fa1          84 KPGDKVIPLFV-PQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVADIAVAKIDP  162 (198)
T ss_dssp             CTTCEEEECSS-CCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEETTSEEEECT
T ss_pred             cCCCEEEEEee-ccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEecHHHEEECCC
Confidence            99999987665 58999999999999999875321 111111110             1248999999999999999999


Q ss_pred             CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHH
Q 019199          152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGH  194 (344)
Q Consensus       152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~  194 (344)
                      ++++..+++..+...+.          .++++|||.|+|.+|+
T Consensus       163 ~~~~~~~~~~~~~~~~v----------~~~~~vlv~G~G~iGl  195 (198)
T d1p0fa1         163 KINVNFLVSTKLTLDQI----------NKAFELLSSGQGVRSI  195 (198)
T ss_dssp             TSCGGGGEEEEECGGGH----------HHHHHHTTTSSCSEEE
T ss_pred             CCCHHHHHHhhcchhhc----------CCCCEEEEECCCcceE
Confidence            99988777655543332          2334577788887764

>d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.97  E-value=4.6e-30  Score=210.95  Aligned_cols=166  Identities=25%  Similarity=0.401  Sum_probs=135.5

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC--------CCCCCCCcccccceEEEEecCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG--------DSKYPLVPGHEIVGIVKEVGHNV   82 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~--------~~~~p~~~G~e~~G~V~~~G~~~   82 (344)
                      +++.+.+..++|++++++.|+|++|||+||+.++|||++|++.++|..+        ...+|+++|||++|+|+++|+.+
T Consensus         2 KA~~~~~~G~pl~i~dv~~P~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~G~V~~~g~~v   81 (177)
T d1jvba1           2 RAVRLVEIGKPLSLQEIGVPKPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIAGKIEEVGDEV   81 (177)
T ss_dssp             EEEEECSTTSCCEEEECCCCCCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEEEEEEEECTTC
T ss_pred             eEEEEEeCCCCCEEEEeeCCCCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEEEEEeeeccCc
Confidence            4555554455699999999999999999999999999999999988642        34689999999999999999999


Q ss_pred             CCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecce-EEEcCCCCCccccccc
Q 019199           83 SRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERY-CYKIANDYPLALAAPL  161 (344)
Q Consensus        83 ~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~-~~~~P~~~~~~~aa~l  161 (344)
                      ++|++||+|++.+.. .|+.|.+|++|.++.|.+....       |...+|+|+||+.+++.. ++++|+..+...|+.+
T Consensus        82 ~~~~~GdrV~~~~~~-~c~~c~~~~~g~~~~c~~~~~~-------g~~~~G~~aey~~vp~~~~~~~~~~~~~~~~a~~~  153 (177)
T d1jvba1          82 VGYSKGDLVAVNPWQ-GEGNCYYCRIGEEHLCDSPRWL-------GINFDGAYAEYVIVPHYKYMYKLRRVKPMITKTMK  153 (177)
T ss_dssp             CSCCTTCEEEECCEE-CCSSSHHHHTTCGGGCSSCEEB-------TTTBCCSSBSEEEESCGGGEEECSSSCCCCEEEEE
T ss_pred             cccccCceEeeeecc-ccccccccccccccccCCccee-------eeccccccccEEEEEhHHeEEECCCCChHHHHHHH
Confidence            999999999887654 7999999999999999986433       224569999999997655 6677665555555455


Q ss_pred             chhhhHhHHHHHhccCCCCCCEEEE
Q 019199          162 LCAGITVYTPMMRHKMNQPGKSLGV  186 (344)
Q Consensus       162 ~~~~~ta~~~l~~~~~~~~g~~vlI  186 (344)
                      ..++.++++++.....  .|++|||
T Consensus       154 ~~~~~~a~~~~~~~~~--~G~~VlI  176 (177)
T d1jvba1         154 LEEANEAIDNLENFKA--IGRQVLI  176 (177)
T ss_dssp             GGGHHHHHHHHHTTCC--CSEEEEE
T ss_pred             HHHHHHHHHHHHhhcc--cCCceEC
Confidence            5688899998876664  5899987

>d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.96  E-value=4e-30  Score=210.17  Aligned_cols=168  Identities=20%  Similarity=0.214  Sum_probs=132.3

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +++++. +++.+++++++.|+|+++|||||+.++|||++|++.+.+.....++|+++|||++|+|+++|+++++|++|||
T Consensus         2 Ka~v~~-~~~~l~i~e~p~P~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G~V~~vG~~v~~~~vGdr   80 (177)
T d1jqba1           2 KGFAML-GINKLGWIEKERPVAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVGEVVEVGSEVKDFKPGDR   80 (177)
T ss_dssp             EEEEEE-ETTEEEEEECCCCCCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEEEEEEECTTCCSCCTTCE
T ss_pred             eEEEEE-eCCCeEEEEeeCCCCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeEEeeecccccceecCCCc
Confidence            444544 4567999999999999999999999999999999887665555678999999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEec--ceEEEcCCCCCcccccccchhhhHh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHE--RYCYKIANDYPLALAAPLLCAGITV  168 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~--~~~~~~P~~~~~~~aa~l~~~~~ta  168 (344)
                      |++.+.. +|++|.+|+.|.++.|.+....+.    .+...+|+|+||+.+|.  .+++++|+++++++++.......++
T Consensus        81 V~v~~~~-~cg~c~~C~~g~~~~c~~~~~~~~----~g~~~~G~~aEy~~vp~a~~~l~~iP~~~~~~~~~~~~~~~~~~  155 (177)
T d1jqba1          81 VIVPCTT-PDWRSLEVQAGFQQHSNGMLAGWK----FSNFKDGVFGEYFHVNDADMNLAILPKDVDLSKLVTHVYHGFDH  155 (177)
T ss_dssp             EEECSCC-CCSSSHHHHTTCGGGTTSTTTTCC----BTTTBCCSSBSSEEESSHHHHCEECCTTSCGGGGEEEEEESGGG
T ss_pred             EEEeeee-ccccccchhhhhhccccccccccc----ccCCCChhcCeeEEEEhhhCeEEECCCCcchHHHHHHHHHHHHH
Confidence            9887665 899999999999999987533211    12245699999999986  4699999999998876544332222


Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHH
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHM  195 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~  195 (344)
                         +        ++.++++|+|++|+.
T Consensus       156 ---~--------~~~vlv~g~gp~gl~  171 (177)
T d1jqba1         156 ---I--------EEALLLMKDKPKDLI  171 (177)
T ss_dssp             ---H--------HHHHHHHHHCCTTCS
T ss_pred             ---h--------cCceEEECCCHHHhh
Confidence               1        233566666666543

>d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.7e-29  Score=201.35  Aligned_cols=147  Identities=20%  Similarity=0.322  Sum_probs=130.4

Q ss_pred             ccceeeeeecCCCCCccce-eeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199            7 SKDCLGWAARDPSGVLSPY-SFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         7 ~~~~~~~~~~~~~~~~~~~-~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      +||+..+..+++++.+++. +.+.|+|++|||||||.++++|++|++.+.|... ...+|.++|||++|+|+++|+++++
T Consensus         2 ~MkAv~~~~~G~p~~l~~~~~~~~P~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G~V~~vG~~v~~   81 (150)
T d1yb5a1           2 LMRAVRVFEFGGPEVLKLRSDIAVPIPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAGVIEAVGDNASA   81 (150)
T ss_dssp             EEEEEEESSCSSGGGEEEEEEEECCCCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEEEEEEECTTCTT
T ss_pred             ceeEEEEEccCCcceEEEEeecCCCCCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceeeeeEeecceeec
Confidence            6777777766677778874 6899999999999999999999999999988765 3467899999999999999999999


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      |++||||+..+                                  ...|+|+||++++++.++++|+++++.+||+++++
T Consensus        82 ~~vGdrV~~~~----------------------------------~~~G~~ae~~~v~~~~~~~iP~~ls~~~Aa~~~~~  127 (150)
T d1yb5a1          82 FKKGDRVFTSS----------------------------------TISGGYAEYALAADHTVYKLPEKLKPVIGSQYPLE  127 (150)
T ss_dssp             CCTTCEEEESC----------------------------------CSSCSSBSEEEEEGGGEEECCTTCCCCEEEEEEGG
T ss_pred             cccCccccccc----------------------------------cccccccccccccccccccccCCCCHHHHHHhhhh
Confidence            99999997533                                  24589999999999999999999999999999999


Q ss_pred             hhHhHHHHHhccCCCCCCEEEEE
Q 019199          165 GITVYTPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~~g~~vlI~  187 (344)
                      ..|+++++...+..+.|+++||+
T Consensus       128 ~~ta~~~~~~~g~~~~G~~vliL  150 (150)
T d1yb5a1         128 KVAEAHENIIHGSGATGKMILLL  150 (150)
T ss_dssp             GHHHHHHHHHHSSCCSSEEEEEC
T ss_pred             hhhehhhheEEcCcccCCEEEEC
Confidence            99999998888888999999874

>d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.95  E-value=9.5e-28  Score=190.74  Aligned_cols=141  Identities=18%  Similarity=0.239  Sum_probs=122.1

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecCCCCCCCCCCE
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGHNVSRFKVGDH   90 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~   90 (344)
                      +.+.-+++++.|++++.+.|+|++|||+||+.|+++|++|+++++|..+...+|.++|||++|+|+++|+++++|++||+
T Consensus         4 i~~~~~G~pe~l~~~e~~~P~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G~V~~vG~~v~~~~vGdr   83 (147)
T d1qora1           4 IEFHKHGGPEVLQAVEFTPADPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAGIVSKVGSGVKHIKAGDR   83 (147)
T ss_dssp             EEBSSCCSGGGCEEEECCCCCCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEEEEEEECTTCCSCCTTCE
T ss_pred             EEEcccCCCceeEEEEecCCCCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeeccccccceeeeeeecccccccce
Confidence            44555667778999999999999999999999999999999999999887889999999999999999999999999999


Q ss_pred             EEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccc--cccchhhhHh
Q 019199           91 VGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALA--APLLCAGITV  168 (344)
Q Consensus        91 V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~a--a~l~~~~~ta  168 (344)
                      |+...                                  ...|+|+||+.++.+.++++|+++++.++  +++++...|+
T Consensus        84 V~~~~----------------------------------~~~G~~ae~~~v~~~~~~~~P~~~~~~~a~a~~~~~~~~~~  129 (147)
T d1qora1          84 VVYAQ----------------------------------SALGAYSSVHNIIADKAAILPAAIKVDVAEQQKYPLKDAQR  129 (147)
T ss_dssp             EEESC----------------------------------CSSCCSBSEEEEEGGGEEECCTTSCCCCCGGGEEEGGGHHH
T ss_pred             eeeec----------------------------------cccccceeEEEEehHHeEEcCcccchHHHHHHHHHHHHHHH
Confidence            96321                                  23589999999999999999999988755  4567777788


Q ss_pred             HHHHHhccCCCCCCEEEE
Q 019199          169 YTPMMRHKMNQPGKSLGV  186 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI  186 (344)
                      ++++.+. ++++|++|||
T Consensus       130 ~~~l~~~-~~~~G~~VLI  146 (147)
T d1qora1         130 AHEILES-RATQGSSLLI  146 (147)
T ss_dssp             HHHHHHT-TCCCBCCEEE
T ss_pred             HHHHHHh-CCCCCCEEEe
Confidence            8887765 4599999997

>d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.93  E-value=1.6e-26  Score=184.56  Aligned_cols=147  Identities=19%  Similarity=0.283  Sum_probs=120.5

Q ss_pred             ceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCC
Q 019199            9 DCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKV   87 (344)
Q Consensus         9 ~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~   87 (344)
                      |+..+...+++..+++++++.|+|++|||||||.++|||++|++.+.|..+ ....|.++|||++|+|++  +.++.|++
T Consensus         5 KA~v~~~~~~~~~~~i~~v~~P~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G~v~~--~~~~~~~~   82 (152)
T d1xa0a1           5 QAFVVNKTETEFTAGVQTISMDDLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAGVVVS--SQHPRFRE   82 (152)
T ss_dssp             EEEEEEEETTEEEEEEEEEEGGGSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEEEEEE--CCSSSCCT
T ss_pred             EEEEEEecCCceEEEEEEccCCCCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeeeeeec--cCCCcccc
Confidence            444444444444567889999999999999999999999999988888765 456789999999999999  55688999


Q ss_pred             CCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhH
Q 019199           88 GDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGIT  167 (344)
Q Consensus        88 Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~t  167 (344)
                      ||+|+.....                             .+...+|+|+||+++|++.++++|++++ .+||+++++..|
T Consensus        83 g~~v~~~~~~-----------------------------~~~~~~G~~aEy~~v~~~~~~~iP~~l~-~~aa~l~~a~~t  132 (152)
T d1xa0a1          83 GDEVIATGYE-----------------------------IGVTHFGGYSEYARLHGEWLVPLPKGLE-RIAQEISLAELP  132 (152)
T ss_dssp             TCEEEEESTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTHH-HHEEEEEGGGHH
T ss_pred             CCEEEEecCc-----------------------------cccccCCCcceeeeehhhccccCCCCCC-HHHHHHHHHHHH
Confidence            9999643210                             0224569999999999999999999998 578889999999


Q ss_pred             hHHHHHhccCCCCCCEEEEEC
Q 019199          168 VYTPMMRHKMNQPGKSLGVIG  188 (344)
Q Consensus       168 a~~~l~~~~~~~~g~~vlI~G  188 (344)
                      |+.++.....+ +|++|||+|
T Consensus       133 a~~~~~~~~~~-~G~tVL~l~  152 (152)
T d1xa0a1         133 QALKRILRGEL-RGRTVVRLA  152 (152)
T ss_dssp             HHHHHHHHTCC-CSEEEEECC
T ss_pred             HHHHHHHhcCC-CCCEEEEcC
Confidence            99988888885 599999975

>d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.93  E-value=4e-26  Score=176.74  Aligned_cols=129  Identities=16%  Similarity=0.311  Sum_probs=112.5

Q ss_pred             eeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCCCCC
Q 019199           11 LGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFKVGD   89 (344)
Q Consensus        11 ~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd   89 (344)
                      ++|...+..+++++++++.|+|+++||+||+.|+|||++|++.++|.+. ...+|.++|||++|+|           +||
T Consensus         2 kA~~~~~~G~~l~~~e~~~p~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G~V-----------vGd   70 (131)
T d1iz0a1           2 KAWVLKRLGGPLELVDLPEPEAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVGVV-----------EGR   70 (131)
T ss_dssp             EEEEECSTTSCEEEEECCCCCCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEEEE-----------TTE
T ss_pred             cEEEEccCCCCCEEEEccCCCCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEEee-----------ccc
Confidence            4555554556689999999999999999999999999999999998765 4578999999999999           499


Q ss_pred             EEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhH
Q 019199           90 HVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVY  169 (344)
Q Consensus        90 ~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~  169 (344)
                      +|+...                                   .+|+|+||++++++.++++|+++++++||++++.+.|||
T Consensus        71 ~V~~~~-----------------------------------~~G~~aey~~v~~~~~~~~P~~~~~~~aa~~~~~~~Ta~  115 (131)
T d1iz0a1          71 RYAALV-----------------------------------PQGGLAERVAVPKGALLPLPEGRPVVGPVFPFAEAEAAF  115 (131)
T ss_dssp             EEEEEC-----------------------------------SSCCSBSEEEEEGGGCEECCTTCCCEEEEEEGGGHHHHH
T ss_pred             eEEEEe-----------------------------------ccCccceeeeeCHHHeEEccCCCCHHHHHHHHHHHHHHH
Confidence            997532                                   358999999999999999999999999999999999999


Q ss_pred             HHHHhccCCCCCCEEEEE
Q 019199          170 TPMMRHKMNQPGKSLGVI  187 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~  187 (344)
                      +++.+.+  +.|++||++
T Consensus       116 ~al~~~g--~~g~tvl~l  131 (131)
T d1iz0a1         116 RALLDRG--HTGKVVVRL  131 (131)
T ss_dssp             HHTTCTT--CCBEEEEEC
T ss_pred             HHHHhcc--cCCCEEEEC
Confidence            9997655  669999863

>d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.91  E-value=1.8e-26  Score=186.30  Aligned_cols=154  Identities=20%  Similarity=0.220  Sum_probs=127.9

Q ss_pred             cccceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCC
Q 019199            6 ASKDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSR   84 (344)
Q Consensus         6 ~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~   84 (344)
                      .++|+..+...++...+++++++.|++++|||||||.|+|||++|++.+.|..+ ....|.++|+|++|+|++  +.+.+
T Consensus         2 ~~~ka~~~~~~g~~~~l~~~~v~~p~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G~v~~--~~~~~   79 (162)
T d1tt7a1           2 TLFQALQAEKNADDVSVHVKTISTEDLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAGTVVS--SNDPR   79 (162)
T ss_dssp             CEEEEEEECCGGGSCCCEEEEEESSSSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEEEEEE--CSSTT
T ss_pred             CcEEEEEEEecCCCeEEEEEEcCCCCCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccccccc--ccccc
Confidence            467777777766778899999999999999999999999999999999988766 345678999999999998  56688


Q ss_pred             CCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchh
Q 019199           85 FKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCA  164 (344)
Q Consensus        85 ~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~  164 (344)
                      +++||+|......                             .+....|+|+||+.+|++.++++|+++++++||++++.
T Consensus        80 ~~~g~~v~~~~~~-----------------------------~g~~~~G~~aey~~v~~~~l~~iP~~ls~~~Aa~~~~~  130 (162)
T d1tt7a1          80 FAEGDEVIATSYE-----------------------------LGVSRDGGLSEYASVPGDWLVPLPQNLSLKEAMVDQLL  130 (162)
T ss_dssp             CCTTCEEEEESTT-----------------------------BTTTBCCSSBSSEEECGGGEEECCTTCCHHHHHHSCST
T ss_pred             cccceeeEeeecc-----------------------------ceeccccccceEEEecHHHEEECCCCCCHHHHHHHHHH
Confidence            9999999754321                             12345799999999999999999999999999999999


Q ss_pred             hhHhHHHHHhccCCCCCCEEEEECC-Ch
Q 019199          165 GITVYTPMMRHKMNQPGKSLGVIGL-GG  191 (344)
Q Consensus       165 ~~ta~~~l~~~~~~~~g~~vlI~Ga-g~  191 (344)
                      +.|||.++.... ...+++|||.|+ |+
T Consensus       131 ~~ta~~~~~~~~-~~~~~~Vli~ga~G~  157 (162)
T d1tt7a1         131 TIVDREVSLEET-PGALKDILQNRIQGR  157 (162)
T ss_dssp             TSEEEEECSTTH-HHHHHHTTTTCCSSE
T ss_pred             HHHHHHHHHhcC-CCCCCEEEEECCcce
Confidence            999998765443 356677888776 53

>d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=2.2e-24  Score=170.27  Aligned_cols=134  Identities=16%  Similarity=0.227  Sum_probs=109.5

Q ss_pred             cceeeeeecCCCCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC-CCCCCCCcccccceEEEEecCCCCCCC
Q 019199            8 KDCLGWAARDPSGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG-DSKYPLVPGHEIVGIVKEVGHNVSRFK   86 (344)
Q Consensus         8 ~~~~~~~~~~~~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~-~~~~p~~~G~e~~G~V~~~G~~~~~~~   86 (344)
                      ||+..+.-++++..+++++++.|+|++|||+|||.|+|||++|.....|..+ ...+|.++|+|++|+|++.|.  ..++
T Consensus         1 MkA~v~~~~~~~~~l~i~~v~~p~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G~V~~~~~--~~~~   78 (146)
T d1o89a1           1 LQALLLEQQDGKTLASVQTLDESRLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAGTVRTSED--PRFH   78 (146)
T ss_dssp             CEEEEEECC---CEEEEEECCGGGSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEEEEEEECS--TTCC
T ss_pred             CeEEEEEcCCCceEEEEEEcCCCCCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccccceeecc--CCcc
Confidence            4555555555556688899999999999999999999999999999988765 446789999999999999765  5799


Q ss_pred             CCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhh
Q 019199           87 VGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGI  166 (344)
Q Consensus        87 ~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~  166 (344)
                      +||+|+.....                             .|...+|+|+||+.+|+++++++|+++|+++||++++++.
T Consensus        79 ~g~~v~~~~~~-----------------------------~g~~~~G~~Aey~~v~~~~vv~lP~~ls~~eAA~l~~a~~  129 (146)
T d1o89a1          79 AGQEVLLTGWG-----------------------------VGENHWGGLAEQARVKGDWLVAMPQGQAAKEISLSEAPNF  129 (146)
T ss_dssp             TTCEEEEECTT-----------------------------BTTTBCCSSBSEEEECGGGCEECCTTSCCEEECGGGHHHH
T ss_pred             ceeeEEeeccc-----------------------------ceecCCCcceeeeeeeeeeEEECCCCCCHHHHHHHHHHHH
Confidence            99999754321                             0234579999999999999999999999999999999988


Q ss_pred             HhHHHH
Q 019199          167 TVYTPM  172 (344)
Q Consensus       167 ta~~~l  172 (344)
                      ||+..+
T Consensus       130 tA~~~~  135 (146)
T d1o89a1         130 AEAIIN  135 (146)
T ss_dssp             HHHHHT
T ss_pred             HHHHHH
Confidence            885443

>d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Cinnamyl alcohol dehydrogenase, ADH6
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.91  E-value=2.8e-24  Score=174.56  Aligned_cols=153  Identities=33%  Similarity=0.599  Sum_probs=128.1

Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                      +++.||+++|++.|+|+++.+.. +++|++|+|+|+|++|++++|++|.+|++|++++++++|++.+ +++|+++++++.
T Consensus         2 p~e~AApl~cag~Ta~~al~~~~-~~~g~~vlI~GaG~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a-~~lGa~~~i~~~   79 (168)
T d1piwa2           2 PSHLAAPLLCGGLTVYSPLVRNG-CGPGKKVGIVGLGGIGSMGTLISKAMGAETYVISRSSRKREDA-MKMGADHYIATL   79 (168)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHHTT-CSTTCEEEEECCSHHHHHHHHHHHHHTCEEEEEESSSTTHHHH-HHHTCSEEEEGG
T ss_pred             CHHHHHHHHHHHHHHHHHHHHhC-cCCCCEEEEECCCCcchhHHHHhhhccccccccccchhHHHHh-hccCCcEEeecc
Confidence            45668899999999999998765 5999999999999999999999999999999999999999998 799999999876


Q ss_pred             CH-HHHHHhcCCccEEEECCCCch--hHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHHH
Q 019199          234 DL-EQMKALGKSLDFIIDTASGDH--PFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEML  299 (344)
Q Consensus       234 ~~-~~~~~~~~~~dvvid~~g~~~--~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~~  299 (344)
                      +. +..++..+++|+++|+++...  .+..++++++++|+++.+|.. ....++..++.          .++++++++++
T Consensus        80 ~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~~~e~l  159 (168)
T d1piwa2          80 EEGDWGEKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQHEMLSLKPYGLKAVSISYSALGSIKELNQLL  159 (168)
T ss_dssp             GTSCHHHHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSSCCEEECGGGCBSCEEEECCCCCHHHHHHHH
T ss_pred             chHHHHHhhhcccceEEEEecCCccchHHHHHHHhhccceEEEeccccccccccHHHHHhCCcEEEEEeeCCHHHHHHHH
Confidence            54 455566788999999987643  477899999999999999976 33333333322          45678999999


Q ss_pred             HHHHhCCCc
Q 019199          300 EYCAAHKIY  308 (344)
Q Consensus       300 ~~~~~g~~~  308 (344)
                      +++++|+++
T Consensus       160 ~li~~gkIk  168 (168)
T d1piwa2         160 KLVSEKDIK  168 (168)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHhCCCC
Confidence            999999875

>d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YahK
species: Escherichia coli [TaxId: 562]

Probab=99.91  E-value=5.9e-24  Score=172.68  Aligned_cols=154  Identities=46%  Similarity=0.771  Sum_probs=128.5

Q ss_pred             CCCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          152 DYPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       152 ~~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      ..+++.+|+++|++.|+|+++++. .+++|++|+|+|+|++|++++|+||.+|+++++++.++++++.+ +++|++++++
T Consensus         3 ~~~~a~~Apl~Cag~Tay~al~~~-~~~~G~~VlI~GaG~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a-~~lGad~~i~   80 (168)
T d1uufa2           3 QEQLAAVAPLLCAGITTYSPLRHW-QAGPGKKVGVVGIGGLGHMGIKLAHAMGAHVVAFTTSEAKREAA-KALGADEVVN   80 (168)
T ss_dssp             GGGHHHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSGGGHHHH-HHHTCSEEEE
T ss_pred             cccHHHHHHHHhHHHHHHHHHHHh-CCCCCCEEEEeccchHHHHHHHHhhcccccchhhccchhHHHHH-hccCCcEEEE
Confidence            345678889999999999999764 56999999999999999999999999999999999999998888 7999999999


Q ss_pred             CCCHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-C-ccccCCceee----------eechHhHHHHH
Q 019199          232 SSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-S-KVKFSPASLN----------IGGTKDTQEML  299 (344)
Q Consensus       232 ~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~-~~~~~~~~~~----------~~~~~~~~~~~  299 (344)
                      +.+.+......+++|++||++|.+.++..++++++++|+++.+|.. . ...++...+.          .++++++++++
T Consensus        81 ~~~~~~~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~e~l  160 (168)
T d1uufa2          81 SRNADEMAAHLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATPHKSPEVFNLIMKRRAIAGSMIGGIPETQEML  160 (168)
T ss_dssp             TTCHHHHHTTTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC-------CHHHHHTTTCEEEECCSCCHHHHHHHH
T ss_pred             CchhhHHHHhcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCCcccccHHHHHHCCcEEEEEeecCHHHHHHHH
Confidence            9988776666789999999999988899999999999999999976 2 2222222211          44568899999


Q ss_pred             HHHHhCCC
Q 019199          300 EYCAAHKI  307 (344)
Q Consensus       300 ~~~~~g~~  307 (344)
                      +++++++|
T Consensus       161 ~l~a~~~I  168 (168)
T d1uufa2         161 DFCAEHGI  168 (168)
T ss_dssp             HHHHHHTC
T ss_pred             HHHHHcCC
Confidence            99988764

>d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=5.6e-24  Score=173.89  Aligned_cols=151  Identities=19%  Similarity=0.296  Sum_probs=123.6

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +|+++||++++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+ +++|+++++|
T Consensus         1 ls~~~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~-~~~Ga~~vi~   79 (174)
T d1yb5a2           1 LDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIV-LQNGAHEVFN   79 (174)
T ss_dssp             SCHHHHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEE
T ss_pred             CCHHHHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCcccccccccccccccc-cccCcccccc
Confidence            5789999999999999999988888899999999997 9999999999999999999999998888888 7899999999


Q ss_pred             CCCHHHHHHh-----cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCceee------------eechHh
Q 019199          232 SSDLEQMKAL-----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN------------IGGTKD  294 (344)
Q Consensus       232 ~~~~~~~~~~-----~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~------------~~~~~~  294 (344)
                      +++.+..+++     .+++|++||++|+. .++.++++++++|+++.+|.....++++..+.            ....++
T Consensus        80 ~~~~~~~~~i~~~t~~~g~d~v~d~~g~~-~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~  158 (174)
T d1yb5a2          80 HREVNYIDKIKKYVGEKGIDIIIEMLANV-NLSKDLSLLSHGGRVIVVGSRGTIEINPRDTMAKESSIIGVTLFSSTKEE  158 (174)
T ss_dssp             TTSTTHHHHHHHHHCTTCEEEEEESCHHH-HHHHHHHHEEEEEEEEECCCCSCEEECTHHHHTTTCEEEECCGGGCCHHH
T ss_pred             cccccHHHHhhhhhccCCceEEeecccHH-HHHHHHhccCCCCEEEEEecCCCCCCCHHHHHHCCCEEEEEEecCCCHHH
Confidence            9876544432     36799999999976 49999999999999999987644444433222            112355


Q ss_pred             HHHHHHHHHhC
Q 019199          295 TQEMLEYCAAH  305 (344)
Q Consensus       295 ~~~~~~~~~~g  305 (344)
                      ++++++++.++
T Consensus       159 ~~~~~~~l~~g  169 (174)
T d1yb5a2         159 FQQYAAALQAG  169 (174)
T ss_dssp             HHHHHHHHHHH
T ss_pred             HHHHHHHHHHH
Confidence            66666666543

>d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Mouse (Mus musculus), class II [TaxId: 10090]

Probab=99.90  E-value=1.5e-23  Score=170.71  Aligned_cols=152  Identities=18%  Similarity=0.286  Sum_probs=122.0

Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++||+++|++.|+|+++.+...+++|++|+|+|+|++|++++|+++.+|+ +|++++.+++|++.+ +++|+++++++
T Consensus         2 ~Le~aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a-~~~Ga~~~i~~   80 (174)
T d1e3ia2           2 NLERVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGLGCVGLSAIIGCKIAGASRIIAIDINGEKFPKA-KALGATDCLNP   80 (174)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEEECG
T ss_pred             CHHHHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCChHHHHHHHHHHHhCCceeeeeccchHHHHHH-HHhCCCcccCC
Confidence            4678999999999999999888888999999999999999999999999999 788899999999888 79999999986


Q ss_pred             CCH----HHHHH--hcCCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC-CccccCCceee---------ee---ch
Q 019199          233 SDL----EQMKA--LGKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP-SKVKFSPASLN---------IG---GT  292 (344)
Q Consensus       233 ~~~----~~~~~--~~~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~-~~~~~~~~~~~---------~~---~~  292 (344)
                      ...    ....+  ..+++|++||++|++.++++++++++++ |+++.+|.. ...+++...+.         .+   ..
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~~~i~~~~~~~~k~i~Gs~~Gs~~~~  160 (174)
T d1e3ia2          81 RELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSV  160 (174)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSEEEEEHHHHHTTCEEEECSGGGCCHH
T ss_pred             ccchhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCccccchHHHhccCEEEEEEeeCCChH
Confidence            432    22222  2478999999999999999999999996 999999987 44454433221         11   12


Q ss_pred             HhHHHHHHHHHhCC
Q 019199          293 KDTQEMLEYCAAHK  306 (344)
Q Consensus       293 ~~~~~~~~~~~~g~  306 (344)
                      ++++++++++++||
T Consensus       161 ~d~p~li~l~~~GK  174 (174)
T d1e3ia2         161 DSVPNLVSDYKNKK  174 (174)
T ss_dssp             HHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHCcC
Confidence            45666666666654

>d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=99.90  E-value=1.9e-23  Score=169.36  Aligned_cols=151  Identities=29%  Similarity=0.499  Sum_probs=126.9

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      +++++||+++|++.|||+++++.. +++|++|+|+|+|++|++++|++|.+|++|++++++++|++.+ +++|+++++++
T Consensus         1 v~f~~aA~l~ca~~Ta~~al~~~~-~~~g~~VlV~GaG~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a-~~~Ga~~~i~~   78 (166)
T d1llua2           1 VEFAEIAPILCAGVTVYKGLKQTN-ARPGQWVAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELA-RKLGASLTVNA   78 (166)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHT-CCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEEEET
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEeeccccHHHHHHHHHHcCCccceecchhhHHHhh-hccCccccccc
Confidence            578999999999999999998755 5999999999999999999999999999999999999999988 79999999998


Q ss_pred             CCHHHHH---HhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHH
Q 019199          233 SDLEQMK---ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEM  298 (344)
Q Consensus       233 ~~~~~~~---~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~  298 (344)
                      .+.+..+   +...+.+.+++++++..+++.++++++++|+++.+|.. ....++...+.          ..++++++++
T Consensus        79 ~~~~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~~~i~Gs~~~~~~d~~e~  158 (166)
T d1llua2          79 RQEDPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPGDFPTPIFDVVLKGLHIAGSIVGTRADLQEA  158 (166)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             cchhHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCCCccCCHHHHHhCCcEEEEEeecCHHHHHHH
Confidence            7765433   33567888888888888899999999999999999976 44444433332          3346788888


Q ss_pred             HHHHHhC
Q 019199          299 LEYCAAH  305 (344)
Q Consensus       299 ~~~~~~g  305 (344)
                      ++++++|
T Consensus       159 l~l~~~G  165 (166)
T d1llua2         159 LDFAGEG  165 (166)
T ss_dssp             HHHHHTT
T ss_pred             HHHHHCc
Confidence            8888887

>d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Benzyl alcohol dehydrogenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=99.90  E-value=3e-23  Score=169.36  Aligned_cols=153  Identities=22%  Similarity=0.310  Sum_probs=125.4

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      ++++.|++++|++.|||+++.+...+++|++|+|+|+|++|++++|+++.+|+ +|++++.+++|++.+ +++|++++++
T Consensus         1 vP~e~aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a-~~~Ga~~~i~   79 (174)
T d1f8fa2           1 VPIELLGPLGCGIQTGAGACINALKVTPASSFVTWGAGAVGLSALLAAKVCGASIIIAVDIVESRLELA-KQLGATHVIN   79 (174)
T ss_dssp             SCGGGTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESCSHHHHHHHHHHHHHTCSEEEEEESCHHHHHHH-HHHTCSEEEE
T ss_pred             CCHHHHHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCCCHHHhhhhhcccccccceeeeeccHHHHHHHH-HHcCCeEEEe
Confidence            35678999999999999998888888999999999999999999999999999 566778888888888 7999999999


Q ss_pred             CCCHHHHH---Hhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee------ee-------c
Q 019199          232 SSDLEQMK---ALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN------IG-------G  291 (344)
Q Consensus       232 ~~~~~~~~---~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~------~~-------~  291 (344)
                      +++++..+   +++ +++|++||++|++.+++.+++.++++|+++.+|..   ....++...+.      .+       .
T Consensus        80 ~~~~~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~~~~~~~~~~~~~k~~~i~Gs~~g~~~~  159 (174)
T d1f8fa2          80 SKTQDPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLGTTAQFDVNDLLLGGKTILGVVEGSGSP  159 (174)
T ss_dssp             TTTSCHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTTCCCCCCHHHHHHTTCEEEECSGGGSCH
T ss_pred             CCCcCHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCCcccccCHHHHHHCCCEEEEEEecCCCh
Confidence            87754433   343 68999999999988899999999999999999975   23344433332      11       1


Q ss_pred             hHhHHHHHHHHHhCC
Q 019199          292 TKDTQEMLEYCAAHK  306 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~  306 (344)
                      +++++++++|+++|+
T Consensus       160 ~~~~~~~~~l~~~Gk  174 (174)
T d1f8fa2         160 KKFIPELVRLYQQGK  174 (174)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            367888999988875

>d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative enoyl reductase domain of polyketide synthase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=99.89  E-value=1.6e-23  Score=172.64  Aligned_cols=153  Identities=20%  Similarity=0.269  Sum_probs=125.2

Q ss_pred             ccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       156 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      +|||++++++.|||+++.+...+++|++|||+|+ |++|++++|+|+.+|++|+++++++++.+.+ +++|+++++++++
T Consensus         1 eeAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l-~~~Ga~~vi~~~~   79 (183)
T d1pqwa_           1 NEAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML-SRLGVEYVGDSRS   79 (183)
T ss_dssp             CHHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HTTCCSEEEETTC
T ss_pred             CchhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeeccccccccc-ccccccccccCCc
Confidence            4789999999999999988888899999999986 9999999999999999999999999988888 7999999999887


Q ss_pred             HHHHHH---hc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCce------ee------------
Q 019199          235 LEQMKA---LG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPAS------LN------------  288 (344)
Q Consensus       235 ~~~~~~---~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~------~~------------  288 (344)
                      ++..++   .+  +++|++||++|+.. ++.++++++++|+++.+|..   ....+....      +.            
T Consensus        80 ~~~~~~v~~~t~~~g~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  158 (183)
T d1pqwa_          80 VDFADEILELTDGYGVDVVLNSLAGEA-IQRGVQILAPGGRFIELGKKDVYADASLGLAALAKSASFSVVDLDLNLKLQP  158 (183)
T ss_dssp             STHHHHHHHHTTTCCEEEEEECCCTHH-HHHHHHTEEEEEEEEECSCGGGTTTCEEEGGGGTTTCEEEECCHHHHHHHCH
T ss_pred             cCHHHHHHHHhCCCCEEEEEecccchH-HHHHHHHhcCCCEEEEEccCCCCCCcccchHHHhCCcEEEEEEccceeccCH
Confidence            654433   33  68999999999865 99999999999999999865   111111111      11            


Q ss_pred             eechHhHHHHHHHHHhCCCccc
Q 019199          289 IGGTKDTQEMLEYCAAHKIYPQ  310 (344)
Q Consensus       289 ~~~~~~~~~~~~~~~~g~~~~~  310 (344)
                      ...++.++++++++++|+++|.
T Consensus       159 ~~~~~~~~~v~~~i~~G~i~p~  180 (183)
T d1pqwa_         159 ARYRQLLQHILQHVADGKLEVL  180 (183)
T ss_dssp             HHHHHHHHHHHHHHHTTSSCCC
T ss_pred             HHHHHHHHHHHHHHHCCCCcee
Confidence            1113568889999999999873

>d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Bacterial secondary alcohol dehydrogenase
species: Clostridium beijerinckii [TaxId: 1520]

Probab=99.89  E-value=3.1e-23  Score=169.01  Aligned_cols=152  Identities=17%  Similarity=0.227  Sum_probs=123.4

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +++++|+.+++++.|+|++++... +++|++|+|+|+|++|++++|+||.+|+ +|++++.+++|++.+ +++|++++++
T Consensus         1 ip~e~A~~l~~~~~ta~~a~~~a~-~~~g~~VlI~GaG~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a-~~lGa~~~i~   78 (174)
T d1jqba2           1 MPLENAVMITDMMTTGFHGAELAD-IEMGSSVVVIGIGAVGLMGIAGAKLRGAGRIIGVGSRPICVEAA-KFYGATDILN   78 (174)
T ss_dssp             SCHHHHHTTTTHHHHHHHHHHHTT-CCTTCCEEEECCSHHHHHHHHHHHTTTCSCEEEECCCHHHHHHH-HHHTCSEEEC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHhC-CCCCCEEEEEcCCcchhhhhhhhhcccccccccccchhhhHHHH-HhhCcccccc
Confidence            578899999999999999997754 5999999999999999999999999999 899999999999888 7999999998


Q ss_pred             CCCHHH---HHHhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCceee------------eec
Q 019199          232 SSDLEQ---MKALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASLN------------IGG  291 (344)
Q Consensus       232 ~~~~~~---~~~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~~------------~~~  291 (344)
                      +++.+.   +.+.+  .++|++||++|++.++++++++++++|+++.+|..   ....++...+.            ...
T Consensus        79 ~~~~~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~  158 (174)
T d1jqba2          79 YKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDALLIPRVEWGCGMAHKTIKGGLCPG  158 (174)
T ss_dssp             GGGSCHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSEEEEETTTTGGGTBCCEEEEBCCCC
T ss_pred             ccchhHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCcCcCcHhHHHHHhCccEEEEecCCC
Confidence            876443   33443  57999999999988899999999999999999976   22222222111            112


Q ss_pred             -hHhHHHHHHHHHhCC
Q 019199          292 -TKDTQEMLEYCAAHK  306 (344)
Q Consensus       292 -~~~~~~~~~~~~~g~  306 (344)
                       +..++++++++..|+
T Consensus       159 ~r~~~e~l~~li~~gk  174 (174)
T d1jqba2         159 GRLRAERLRDMVVYNR  174 (174)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             CcccHHHHHHHHHcCC
Confidence             345677888888775

>d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: B. subtilis YhfP homologue
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.89  E-value=3.6e-23  Score=168.10  Aligned_cols=133  Identities=20%  Similarity=0.327  Sum_probs=110.2

Q ss_pred             CCcccccccchhhhHhHHHH---HhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE
Q 019199          153 YPLALAAPLLCAGITVYTPM---MRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK  228 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l---~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (344)
                      +|++|||++++++.|||+++   .+.+..++|++|||+|+ |++|.+++|+||.+|++|+++++++++.+.+ +++|+++
T Consensus         1 lS~~eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~-~~lGa~~   79 (176)
T d1xa0a2           1 LTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYL-RVLGAKE   79 (176)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHH-HHTTCSE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHH-Hhcccce
Confidence            58899999999999999664   45677788999999987 9999999999999999999999999999888 7999999


Q ss_pred             EEeCCCHH--HHHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCcee
Q 019199          229 FVVSSDLE--QMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASL  287 (344)
Q Consensus       229 ~v~~~~~~--~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~  287 (344)
                      ++++++..  ..... .+++|+|||++|+.. +...+++|+++|+++.+|..  ....++...+
T Consensus        80 vi~~~~~~~~~~~~~~~~gvD~vid~vgg~~-~~~~l~~l~~~Griv~~G~~~g~~~~~~~~~~  142 (176)
T d1xa0a2          80 VLAREDVMAERIRPLDKQRWAAAVDPVGGRT-LATVLSRMRYGGAVAVSGLTGGAEVPTTVHPF  142 (176)
T ss_dssp             EEECC---------CCSCCEEEEEECSTTTT-HHHHHHTEEEEEEEEECSCCSSSCCCCCSHHH
T ss_pred             eeecchhHHHHHHHhhccCcCEEEEcCCchh-HHHHHHHhCCCceEEEeecccCcccCCCHHHH
Confidence            99987542  12222 378999999999886 99999999999999999987  3444444433

>d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=99.89  E-value=3.8e-23  Score=168.27  Aligned_cols=152  Identities=29%  Similarity=0.475  Sum_probs=128.1

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEE
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFV  230 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v  230 (344)
                      +++.+||+++|++.|||+++.+.. +++|++|+|+|+ |++|++++|+++.+|+ +|++++.+++|++.+ +++|+++++
T Consensus         1 l~~~eAA~l~c~~~Ta~~al~~~~-~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~-~~~Ga~~~i   78 (170)
T d1jvba2           1 LNAVEAAPLTCSGITTYRAVRKAS-LDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAA-KRAGADYVI   78 (170)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHTT-CCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHH-HHHTCSEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhC-CCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHH-HHcCCceee
Confidence            578999999999999999997765 599999999996 9999999999999997 899999999999888 789999999


Q ss_pred             eCCCHHHHHH---h--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHh
Q 019199          231 VSSDLEQMKA---L--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKD  294 (344)
Q Consensus       231 ~~~~~~~~~~---~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~  294 (344)
                      ++++.+..++   .  .+++|++||++|++.+++.++++++++|+++.+|.. .+.+++...+.          ...+++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~Gs~~~~~~d  158 (170)
T d1jvba2          79 NASMQDPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGADLHYHAPLITLSEIQFVGSLVGNQSD  158 (170)
T ss_dssp             ETTTSCHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCCCCCCHHHHHHHTCEEEECCSCCHHH
T ss_pred             ccCCcCHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccCccccCHHHHHhCCcEEEEEecCCHHH
Confidence            9876544333   2  367999999999998899999999999999999987 55555544332          335678


Q ss_pred             HHHHHHHHHhCC
Q 019199          295 TQEMLEYCAAHK  306 (344)
Q Consensus       295 ~~~~~~~~~~g~  306 (344)
                      ++++++|+++|+
T Consensus       159 ~~~~l~lv~~GK  170 (170)
T d1jvba2         159 FLGIMRLAEAGK  170 (170)
T ss_dssp             HHHHHHHHHTTS
T ss_pred             HHHHHHHHHcCC
Confidence            888888888875

>d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Archaeon Aeropyrum pernix [TaxId: 56636]

Probab=99.89  E-value=9.2e-23  Score=166.20  Aligned_cols=151  Identities=28%  Similarity=0.444  Sum_probs=125.2

Q ss_pred             cccccccchhhhHhHHHHHhcc-CCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          155 LALAAPLLCAGITVYTPMMRHK-MNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       155 ~~~aa~l~~~~~ta~~~l~~~~-~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      +.++|+++|++.|||+++.+.. .+++|++|+|+|+|++|++++|+++.+|+ +|++++.+++|++.+ +++|+++++++
T Consensus         6 l~eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~GaG~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~-~~~ga~~~i~~   84 (172)
T d1h2ba2           6 LVEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLKLA-ERLGADHVVDA   84 (172)
T ss_dssp             HHHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECCSHHHHHHHHHHHHHCCCEEEEEESSHHHHHHH-HHTTCSEEEET
T ss_pred             HHHHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCCChHHHHHHHHHHhhcCcccccccchhHHHHHH-hhcccceeecC
Confidence            5688999999999999998876 36999999999999999999999999998 778888888889888 79999999998


Q ss_pred             CCHH--HHHHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCCCccccCCceee----------eechHhHHHH
Q 019199          233 SDLE--QMKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLN----------IGGTKDTQEM  298 (344)
Q Consensus       233 ~~~~--~~~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~----------~~~~~~~~~~  298 (344)
                      .+..  ...+.  ..++|++||++|+..+++.++++++++|+++.+|.....+++...+.          ...+++++++
T Consensus        85 ~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~l~~k~~~i~Gs~~~~~~d~~~~  164 (172)
T d1h2ba2          85 RRDPVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGELRFPTIRVISSEVSFEGSLVGNYVELHEL  164 (172)
T ss_dssp             TSCHHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSSCCCCCHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             cccHHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCcccccCCHHHHHhCCcEEEEEEecCHHHHHHH
Confidence            7643  22233  26799999999998889999999999999999997654555444333          3445788888


Q ss_pred             HHHHHhCC
Q 019199          299 LEYCAAHK  306 (344)
Q Consensus       299 ~~~~~~g~  306 (344)
                      ++++++|+
T Consensus       165 l~l~~~GK  172 (172)
T d1h2ba2         165 VTLALQGK  172 (172)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHcCC
Confidence            88888875

>d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=99.88  E-value=2.1e-22  Score=163.50  Aligned_cols=154  Identities=33%  Similarity=0.526  Sum_probs=129.6

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      +|+++||+++|++.|||+++..... ++|++|||+|+|++|++++++++..|++|++++.+++|++.+ +++|++.++++
T Consensus         1 ls~eeAA~l~~~~~Ta~~al~~~~~-~~g~~vlv~G~G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~-k~~Ga~~~~~~   78 (168)
T d1rjwa2           1 LSFEEAAPIFCAGVTTYKALKVTGA-KPGEWVAIYGIGGLGHVAVQYAKAMGLNVVAVDIGDEKLELA-KELGADLVVNP   78 (168)
T ss_dssp             SCHHHHGGGGTHHHHHHHHHHHHTC-CTTCEEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCSEEECT
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHhCC-CCCCEEEEeecccchhhhhHHHhcCCCeEeccCCCHHHhhhh-hhcCcceeccc
Confidence            5889999999999999999987765 999999999999999999999999999999999999999988 78999999998


Q ss_pred             CCHH---HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee----------eechHhHHHH
Q 019199          233 SDLE---QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN----------IGGTKDTQEM  298 (344)
Q Consensus       233 ~~~~---~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~----------~~~~~~~~~~  298 (344)
                      .+.+   .+.+.+.+.+.++++.++..++..++++++++|+++.+|.. ...+++...+.          ...+++++++
T Consensus        79 ~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~~~~~~~~~~~~~~~~i~gs~~~~~~~~~~~  158 (168)
T d1rjwa2          79 LKEDAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEEMPIPIFDTVLNGIKIIGSIVGTRKDLQEA  158 (168)
T ss_dssp             TTSCHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSEEEEEHHHHHHTTCEEEECCSCCHHHHHHH
T ss_pred             ccchhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccCCCCCCHHHHHHCCcEEEEEeeCCHHHHHHH
Confidence            7653   34445677777778888888899999999999999999977 44444433322          3456788899


Q ss_pred             HHHHHhCCCc
Q 019199          299 LEYCAAHKIY  308 (344)
Q Consensus       299 ~~~~~~g~~~  308 (344)
                      ++++++|+++
T Consensus       159 l~l~~~Gkik  168 (168)
T d1rjwa2         159 LQFAAEGKVK  168 (168)
T ss_dssp             HHHHHTTSCC
T ss_pred             HHHHHhCCCC
Confidence            9999888874

>d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Escherichia coli [TaxId: 562]

Probab=99.88  E-value=7.1e-23  Score=168.05  Aligned_cols=123  Identities=20%  Similarity=0.315  Sum_probs=110.9

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +|+++||++++++.|||++|.+..++++|++|||+|+ |++|++++|+|+..|++|+++++++++.+.+ +++|+++++|
T Consensus         1 isfe~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~-~~lGa~~vi~   79 (179)
T d1qora2           1 ISFEQAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSA-LKAGAWQVIN   79 (179)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHH-HHHTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHH-HhcCCeEEEE
Confidence            5789999999999999999998888899999999977 8899999999999999999999999999888 7899999999


Q ss_pred             CCCHHHHH---Hhc--CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          232 SSDLEQMK---ALG--KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       232 ~~~~~~~~---~~~--~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++++..+   +.+  +++|+++|+++++. +..++.+++++|+++.+|..
T Consensus        80 ~~~~d~~~~v~~~t~g~g~d~v~d~~g~~~-~~~~~~~l~~~G~~v~~g~~  129 (179)
T d1qora2          80 YREEDLVERLKEITGGKKVRVVYDSVGRDT-WERSLDCLQRRGLMVSFGNS  129 (179)
T ss_dssp             TTTSCHHHHHHHHTTTCCEEEEEECSCGGG-HHHHHHTEEEEEEEEECCCT
T ss_pred             CCCCCHHHHHHHHhCCCCeEEEEeCccHHH-HHHHHHHHhcCCeeeecccc
Confidence            88765443   343  67999999998765 99999999999999999865

>d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.88  E-value=3.1e-25  Score=181.67  Aligned_cols=141  Identities=16%  Similarity=0.121  Sum_probs=116.0

Q ss_pred             ccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCC----------CCCCCCCcccccceEEEEecCCCCCCCCCCEE
Q 019199           22 LSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHG----------DSKYPLVPGHEIVGIVKEVGHNVSRFKVGDHV   91 (344)
Q Consensus        22 ~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~----------~~~~p~~~G~e~~G~V~~~G~~~~~~~~Gd~V   91 (344)
                      ++..+++.|+|+++|||||+.+++||++|++.++|..+          ....|.++|+|++|+|++.|..+..++.||+|
T Consensus        21 l~~~~~p~p~~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~G~e~~g~V~~~~~~~~~~~~g~~v  100 (175)
T d1gu7a1          21 TQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWV  100 (175)
T ss_dssp             EEEEEECTTSCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEECCSCCEEEEEEECTTCCSCCTTCEE
T ss_pred             EEEEECCCCCCCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCcccccccccccccccccccccccccce
Confidence            34457777889999999999999999999999887643          23567889999999999999999999999999


Q ss_pred             EEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCCcccccccchhhhHhHHH
Q 019199           92 GVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYPLALAAPLLCAGITVYTP  171 (344)
Q Consensus        92 ~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~~~~aa~l~~~~~ta~~~  171 (344)
                      ....                                  ...|+|+||+.+++++++++|++++...+  +++...|||++
T Consensus       101 ~~~~----------------------------------~~~g~~aey~~v~~~~~~~iP~~~~~~~a--~~~~~~ta~~~  144 (175)
T d1gu7a1         101 IPSH----------------------------------VNFGTWRTHALGNDDDFIKLPNPAQSKAN--GKPNGLTDAKS  144 (175)
T ss_dssp             EESS----------------------------------SCCCCSBSEEEEEGGGEEEECCHHHHHHT--TCSCCCCCCCC
T ss_pred             eccc----------------------------------cccccccceeeehhhhccCCCccchhhhh--ccchHHHHHHH
Confidence            6432                                  24588999999999999999998764444  45677888888


Q ss_pred             HHh-ccCCCCCCEEEEEC-C-ChHHHHHHH
Q 019199          172 MMR-HKMNQPGKSLGVIG-L-GGLGHMAVK  198 (344)
Q Consensus       172 l~~-~~~~~~g~~vlI~G-a-g~~G~~ai~  198 (344)
                      +.. ...+++|++|||+| + |++|++++|
T Consensus       145 l~~~~~~~~~g~~vli~gaa~~gvG~~~iQ  174 (175)
T d1gu7a1         145 IETLYDGTKPLHELYQDGVANSKDGKQLIT  174 (175)
T ss_dssp             EEEECCSSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred             HHHHhcCCCCCCEEEEECccchhhhheEEe
Confidence            764 35679999999987 4 679988766

>d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Frog (Rana perezi) [TaxId: 8403]

Probab=99.88  E-value=2.6e-22  Score=163.49  Aligned_cols=151  Identities=22%  Similarity=0.329  Sum_probs=121.4

Q ss_pred             cccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       155 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                      +.+||.+.|++.|+|+++.+...+++|++|+|+|+|++|++++|++|++|+ +|++++.+++|++.+ +++|+++++|++
T Consensus         2 P~eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~GaGgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a-~~lGa~~~i~~~   80 (174)
T d1p0fa2           2 PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGLGGVGFSAIVGCKAAGASRIIGVGTHKDKFPKA-IELGATECLNPK   80 (174)
T ss_dssp             CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHTTCSEEECGG
T ss_pred             HHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceeeccCChHHHHHHH-HHcCCcEEEcCC
Confidence            567999999999999998887778999999999999999999999999998 899999999999999 799999999875


Q ss_pred             CHH----H-HHHh-cCCccEEEECCCCchhHHHHHHhccc-CCEEEEEcCC-C--ccccCCceee---------eec--h
Q 019199          234 DLE----Q-MKAL-GKSLDFIIDTASGDHPFDAYMSLLKV-AGVYVLVGFP-S--KVKFSPASLN---------IGG--T  292 (344)
Q Consensus       234 ~~~----~-~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~-~G~iv~~g~~-~--~~~~~~~~~~---------~~~--~  292 (344)
                      +.+    . .... .+++|++||++|+..++..++..+++ +|+++.+|.. .  ..++++..+.         .++  .
T Consensus        81 ~~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (174)
T d1p0fa2          81 DYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPNERLPLDPLLLLTGRSLKGSVFGGFKG  160 (174)
T ss_dssp             GCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTTCCEEECTHHHHTTCEEEECSGGGCCG
T ss_pred             CchhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCccccccCHHHHhCCCEEEEEEeCCCCH
Confidence            432    2 2222 37899999999999889999998877 5999999976 2  3333332221         111  3


Q ss_pred             HhHHHHHHHHHhCC
Q 019199          293 KDTQEMLEYCAAHK  306 (344)
Q Consensus       293 ~~~~~~~~~~~~g~  306 (344)
                      ++++++++|+.+|+
T Consensus       161 ~d~~~lidl~~~gK  174 (174)
T d1p0fa2         161 EEVSRLVDDYMKKK  174 (174)
T ss_dssp             GGHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHcCC
Confidence            57788888887775

>d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein TM0436
species: Thermotoga maritima [TaxId: 2336]

Probab=99.88  E-value=3.1e-22  Score=164.57  Aligned_cols=150  Identities=23%  Similarity=0.393  Sum_probs=122.2

Q ss_pred             cccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCC
Q 019199          155 LALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSS  233 (344)
Q Consensus       155 ~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~  233 (344)
                      +..+|++.|++.|||+++.+..++++|++|||+|+|++|++++|+|+.+|+ +|+++++++++++.+ +++|+++++++.
T Consensus         3 ~~~~a~~~c~~~ta~~al~~~~~~~~G~~VlV~GaG~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a-~~lGa~~vi~~~   81 (182)
T d1vj0a2           3 LDVLAMAMCSGATAYHAFDEYPESFAGKTVVIQGAGPLGLFGVVIARSLGAENVIVIAGSPNRLKLA-EEIGADLTLNRR   81 (182)
T ss_dssp             HHHHHHHTTHHHHHHHHHHTCSSCCBTCEEEEECCSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHH-HHTTCSEEEETT
T ss_pred             HHHHHHhhcHHHHHHHHHHHHhCCCCCCEEEEECCCccchhheeccccccccccccccccccccccc-ccccceEEEecc
Confidence            346778999999999999988888999999999999999999999999999 899999999999988 799999999987


Q ss_pred             CHH---H---HHHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC---CccccCCcee--------e---eec
Q 019199          234 DLE---Q---MKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP---SKVKFSPASL--------N---IGG  291 (344)
Q Consensus       234 ~~~---~---~~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~---~~~~~~~~~~--------~---~~~  291 (344)
                      +.+   .   +.+.  +.++|+|||++|++.+++.++++++++|+++.+|..   ...+++.+..        .   ...
T Consensus        82 ~~~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~~~~~~~~~~~l~~k~l~i~G~~~~~  161 (182)
T d1vj0a2          82 ETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQDPVPFKVYEWLVLKNATFKGIWVSD  161 (182)
T ss_dssp             TSCHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCCCEEECHHHHTTTTTCEEEECCCCC
T ss_pred             ccchHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCCCccccccHHHHHHCCcEEEEEEeCC
Confidence            642   2   2223  257999999999988899999999999999999965   2333333221        1   223


Q ss_pred             hHhHHHHHHHHHhC
Q 019199          292 TKDTQEMLEYCAAH  305 (344)
Q Consensus       292 ~~~~~~~~~~~~~g  305 (344)
                      .+++++++++++++
T Consensus       162 ~~~~~~~~~~i~~~  175 (182)
T d1vj0a2         162 TSHFVKTVSITSRN  175 (182)
T ss_dssp             HHHHHHHHHHHHTC
T ss_pred             HHHHHHHHHHHHHC
Confidence            56778888887764

>d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=5.2e-22  Score=161.56  Aligned_cols=153  Identities=19%  Similarity=0.208  Sum_probs=124.4

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +|+++|| +..++.+||+++.+... ++|++|+|+|+|++|++++|+++.+|+ +|++++++++|++.+ +++|++++++
T Consensus         1 vS~e~Aa-l~epla~a~~a~~~~~~-~~gd~VlI~G~G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a-~~~Ga~~~~~   77 (171)
T d1pl8a2           1 VTFEEGA-LIEPLSVGIHACRRGGV-TLGHKVLVCGAGPIGMVTLLVAKAMGAAQVVVTDLSATRLSKA-KEIGADLVLQ   77 (171)
T ss_dssp             SCHHHHH-HHHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCSEEEE
T ss_pred             CCHHHHH-HHHHHHHHHHHHHHhCC-CCCCEEEEECCCccHHHHHHHHHHcCCceEEeccCCHHHHHHH-HHhCCccccc
Confidence            4677877 44577889999987765 999999999999999999999999999 899999999999998 7999999998


Q ss_pred             CCCHHH---HHH----hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechHh
Q 019199          232 SSDLEQ---MKA----LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTKD  294 (344)
Q Consensus       232 ~~~~~~---~~~----~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~~  294 (344)
                      ..+.+.   .+.    .+.++|++||++|++.+++.++++++++|+++.+|.. ...+++...+.         +...++
T Consensus        78 ~~~~~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~~~~~~~~~~~k~l~i~Gs~~~~~~  157 (171)
T d1pl8a2          78 ISKESPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEMTTVPLLHAAIREVDIKGVFRYCNT  157 (171)
T ss_dssp             CSSCCHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSCCCCCHHHHHHTTCEEEECCSCSSC
T ss_pred             ccccccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCCCccCHHHHHHCCcEEEEEeCCHhH
Confidence            765322   121    2368999999999998899999999999999999987 44455544332         233467


Q ss_pred             HHHHHHHHHhCCCc
Q 019199          295 TQEMLEYCAAHKIY  308 (344)
Q Consensus       295 ~~~~~~~~~~g~~~  308 (344)
                      ++++++++++|+++
T Consensus       158 ~~~al~li~~gkid  171 (171)
T d1pl8a2         158 WPVAISMLASKSVN  171 (171)
T ss_dssp             HHHHHHHHHTTSCC
T ss_pred             HHHHHHHHHcCCCC
Confidence            88888888888763

>d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Quinone oxidoreductase
species: Thermus thermophilus [TaxId: 274]

Probab=99.87  E-value=4.3e-22  Score=161.84  Aligned_cols=121  Identities=23%  Similarity=0.341  Sum_probs=105.3

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV  231 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~  231 (344)
                      +++++||++++++.|||+++.+. .+++|++|||+|+ |++|++++|+||.+|++|+++++++++++.+ +++|+++++|
T Consensus         1 ls~eeAA~l~~~~~TA~~al~~~-~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~-~~lGa~~~i~   78 (171)
T d1iz0a2           1 LSPEEAAAFPVSFLTAYLALKRA-QARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALP-LALGAEEAAT   78 (171)
T ss_dssp             CCHHHHHTSHHHHHHHHHHHHHT-TCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHH-HHTTCSEEEE
T ss_pred             CCHHHHHHHHHHHHHHHHHHHHh-CCCCCCEEEEEeccccchhhhhhhhcccccccccccccccccccc-cccccceeee
Confidence            58899999999999999999874 5699999999997 9999999999999999999999999998888 7999999999


Q ss_pred             CCCHHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          232 SSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       232 ~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.+........+++|++||++|.  .+..++++++++|+++.+|..
T Consensus        79 ~~~~~~~~~~~~g~D~v~d~~G~--~~~~~~~~l~~~G~~v~~G~~  122 (171)
T d1iz0a2          79 YAEVPERAKAWGGLDLVLEVRGK--EVEESLGLLAHGGRLVYIGAA  122 (171)
T ss_dssp             GGGHHHHHHHTTSEEEEEECSCT--THHHHHTTEEEEEEEEEC---
T ss_pred             hhhhhhhhhccccccccccccch--hHHHHHHHHhcCCcEEEEeCC
Confidence            87654433345789999999883  489999999999999999876

>d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Ketose reductase (sorbitol dehydrogenase)
species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]

Probab=99.86  E-value=3.3e-21  Score=156.64  Aligned_cols=151  Identities=23%  Similarity=0.240  Sum_probs=118.6

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      +|+++||. ..++.+||+++.+... ++|++|+|+|+|++|++++|+++.+|++|++++++++|++.+ +++|++..++.
T Consensus         1 VS~e~Aal-~ePla~a~~a~~~~~~-~~g~~vlV~G~G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a-~~~ga~~~~~~   77 (170)
T d1e3ja2           1 VSLEEGAL-LEPLSVGVHACRRAGV-QLGTTVLVIGAGPIGLVSVLAAKAYGAFVVCTARSPRRLEVA-KNCGADVTLVV   77 (170)
T ss_dssp             SCHHHHHT-HHHHHHHHHHHHHHTC-CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHH-HHTTCSEEEEC
T ss_pred             CCHHHHHH-HHHHHHHHHHHHHhCC-CCCCEEEEEcccccchhhHhhHhhhcccccccchHHHHHHHH-HHcCCcEEEec
Confidence            46778774 4567889999987765 999999999999999999999999999999999999999999 79999887754


Q ss_pred             CC----H-HHHHHh----cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC-CccccCCceee---------eechH
Q 019199          233 SD----L-EQMKAL----GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP-SKVKFSPASLN---------IGGTK  293 (344)
Q Consensus       233 ~~----~-~~~~~~----~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~-~~~~~~~~~~~---------~~~~~  293 (344)
                      +.    . +...++    +.++|++||++|++.+++.++++++++|+++.+|.. ...+++...+.         +...+
T Consensus        78 ~~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~~~~~~~~~k~i~i~gs~~~~~  157 (170)
T d1e3ja2          78 DPAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQMVTVPLVNACAREIDIKSVFRYCN  157 (170)
T ss_dssp             CTTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSSCCCCCHHHHHTTTCEEEECCSCSS
T ss_pred             cccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCCCCCcCHHHHHHCCCEEEEEECCHH
Confidence            42    1 122222    368999999999998899999999999999999977 33444433222         23345


Q ss_pred             hHHHHHHHHHhCC
Q 019199          294 DTQEMLEYCAAHK  306 (344)
Q Consensus       294 ~~~~~~~~~~~g~  306 (344)
                      +++++++++++|+
T Consensus       158 ~~~~ai~li~~Gk  170 (170)
T d1e3ja2         158 DYPIALEMVASGR  170 (170)
T ss_dssp             CHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHcCC
Confidence            6777777777764

>d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.85  E-value=7.8e-21  Score=155.26  Aligned_cols=152  Identities=20%  Similarity=0.233  Sum_probs=118.4

Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++||+++|++.|+|+++.+...+++|++|||+|+|++|++++|+++.+|+ +|+++++++++++.+ +++|+++++++
T Consensus         2 P~e~aa~l~ca~~Tay~al~~~~~~~~G~tVlI~GaGGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~a-k~lGa~~~i~~   80 (176)
T d2fzwa2           2 PLDKVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFARA-KEFGATECINP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHHTCSEEEEECSCGGGHHHH-HHHTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEecchhHHHHHHHHHHHHhcCceEEEcccHHHHHHH-HHhCCcEEEeC
Confidence            4678999999999999999888878999999999999999999999999998 788888888888888 79999999987


Q ss_pred             CCH-----HHHHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--Cc-cc-cCCceee---------ee---
Q 019199          233 SDL-----EQMKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SK-VK-FSPASLN---------IG---  290 (344)
Q Consensus       233 ~~~-----~~~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~-~~-~~~~~~~---------~~---  290 (344)
                      .+.     ..+++. .+++|++||++|+..++..+...++++|+++.++..  .. .. .....+.         .+   
T Consensus        81 ~~~~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2fzwa2          81 QDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASGEEIATRPFQLVTGRTWKGTAFGGWK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CchhhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccccccccccHHHHHCCCEEEEEeeeCCc
Confidence            542     122222 378999999999988889999999999888877543  11 11 1111111         11   


Q ss_pred             chHhHHHHHHHHHhCC
Q 019199          291 GTKDTQEMLEYCAAHK  306 (344)
Q Consensus       291 ~~~~~~~~~~~~~~g~  306 (344)
                      ..+++.++++++++||
T Consensus       161 ~~~d~~~li~l~~~GK  176 (176)
T d2fzwa2         161 SVESVPKLVSEYMSKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHcCC
Confidence            1356788888888775

>d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.85  E-value=3.3e-21  Score=158.31  Aligned_cols=117  Identities=18%  Similarity=0.221  Sum_probs=103.8

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      +++++++.|||+++.+..++++|++|||+|+ |++|++++|+||..|++|+++++++++.+.+ +++|+++++++++.+.
T Consensus         8 ~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~-~~~Ga~~vi~~~~~~~   86 (182)
T d1v3va2           8 GTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYL-KQIGFDAAFNYKTVNS   86 (182)
T ss_dssp             TTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHH-HHTTCSEEEETTSCSC
T ss_pred             HHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHH-HhhhhhhhcccccccH
Confidence            4788999999999999999999999999988 8999999999999999999999999998888 7999999999877543


Q ss_pred             H---HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 M---KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~---~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .   .+.  .+++|++||++|++. ++.++++++++|+++.+|..
T Consensus        87 ~~~~~~~~~~~Gvd~v~D~vG~~~-~~~~~~~l~~~G~~v~~G~~  130 (182)
T d1v3va2          87 LEEALKKASPDGYDCYFDNVGGEF-LNTVLSQMKDFGKIAICGAI  130 (182)
T ss_dssp             HHHHHHHHCTTCEEEEEESSCHHH-HHHHGGGEEEEEEEEECCCG
T ss_pred             HHHHHHHhhcCCCceeEEecCchh-hhhhhhhccCCCeEEeecce
Confidence            2   222  368999999999764 99999999999999999864

>d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: 2,4-dienoyl-CoA reductase
species: Yeast (Candida tropicalis) [TaxId: 5482]

Probab=99.85  E-value=2.4e-21  Score=160.10  Aligned_cols=152  Identities=16%  Similarity=0.237  Sum_probs=117.6

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCCCEEEEE-CC-ChHHHHHHHHHHHCCCeEEEEeCCchhH----HHHHHhCCC
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVI-GL-GGLGHMAVKFGKAFGLNVTVLSTSTSKK----EEALSLLGA  226 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~-Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~----~~~~~~~g~  226 (344)
                      +|+++||++++++.|||+++.+...+++|++|+|+ |+ |++|++++|+||.+|++|++++++.++.    +.+ +++|+
T Consensus         1 ls~~~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~-~~lGa   79 (189)
T d1gu7a2           1 LTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASL-KELGA   79 (189)
T ss_dssp             CCHHHHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHH-HHHTC
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhh-hhccc
Confidence            58899999999999999999998888999999887 55 9999999999999999999988765543    334 78999


Q ss_pred             cEEEeCCCHH------HHHH----hcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCceee------
Q 019199          227 DKFVVSSDLE------QMKA----LGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPASLN------  288 (344)
Q Consensus       227 ~~~v~~~~~~------~~~~----~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~~~------  288 (344)
                      ++++++++.+      .+.+    .++++|++||++|++. +..++++|+++|+++.+|..  ...+++...+.      
T Consensus        80 d~vi~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~-~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~l~~k~~~i  158 (189)
T d1gu7a2          80 TQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKS-STGIARKLNNNGLMLTYGGMSFQPVTIPTSLYIFKNFTS  158 (189)
T ss_dssp             SEEEEHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHH-HHHHHHTSCTTCEEEECCCCSSCCEEECHHHHHHSCCEE
T ss_pred             cEEEeccccchhHHHHHHHHHHhhccCCceEEEECCCcch-hhhhhhhhcCCcEEEEECCccCCCccCcHHHHHHCCcEE
Confidence            9999875432      1222    2468999999999876 89999999999999999965  33334433221      


Q ss_pred             ee-------------chHhHHHHHHHHHhCC
Q 019199          289 IG-------------GTKDTQEMLEYCAAHK  306 (344)
Q Consensus       289 ~~-------------~~~~~~~~~~~~~~g~  306 (344)
                      .+             ..+.++++++|+++|+
T Consensus       159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk  189 (189)
T d1gu7a2         159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK  189 (189)
T ss_dssp             EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred             EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence            11             1245677777777764

>d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Human (Homo sapiens), different isozymes [TaxId: 9606]

Probab=99.85  E-value=5.4e-21  Score=155.85  Aligned_cols=123  Identities=21%  Similarity=0.324  Sum_probs=108.3

Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++|+.++|++.|+|+++.+..++++|++|+|+|+|++|+.++|+++.+|+ +|++++.+++|++.+ +++|+++++|+
T Consensus         3 P~e~aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~A-k~~GA~~~in~   81 (176)
T d1d1ta2           3 PPEKVCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGLGGVGLSVIMGCKSAGASRIIGIDLNKDKFEKA-MAVGATECISP   81 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHHTCSEEECG
T ss_pred             CHHHHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECCCchhHHHHHHHHHcCCceEEEecCcHHHHHHH-HhcCCcEEECc
Confidence            4788999999999999999888778999999999999999999999999997 899999999999999 79999999987


Q ss_pred             CCHH----HHHHh--cCCccEEEECCCCchhHHHHHHhcccC-CEEEEEcCC
Q 019199          233 SDLE----QMKAL--GKSLDFIIDTASGDHPFDAYMSLLKVA-GVYVLVGFP  277 (344)
Q Consensus       233 ~~~~----~~~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~-G~iv~~g~~  277 (344)
                      .+.+    ...+.  .+++|++||++|.+.++..++..+.++ |+++.+|..
T Consensus        82 ~~~~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~  133 (176)
T d1d1ta2          82 KDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVP  133 (176)
T ss_dssp             GGCSSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCC
T ss_pred             cccchHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEcc
Confidence            6532    22222  378999999999998888888888665 999999976

>d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Cod (Gadus callarias) [TaxId: 8053]

Probab=99.83  E-value=1.9e-20  Score=152.79  Aligned_cols=152  Identities=22%  Similarity=0.283  Sum_probs=117.9

Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++||+++|++.|+|+++.+...+++|++|+|+|+|++|+.++++++..|+ +|++++++++|++.+ +++|+++++|+
T Consensus         2 P~e~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a-~~~GAd~~in~   80 (175)
T d1cdoa2           2 PLDTVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKA-KVFGATDFVNP   80 (175)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCCEEECG
T ss_pred             CHHHHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEecCCccchHHHHHHHHhhchheeecchHHHHHHH-HHcCCcEEEcC
Confidence            4678999999999999999888778999999999999999999999999988 899999999999988 79999999987


Q ss_pred             CCHH----HHHHh--cCCccEEEECCCCchhHHHHHHhcccCCE-EEEEcCC-CccccCCceee----------ee---c
Q 019199          233 SDLE----QMKAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGV-YVLVGFP-SKVKFSPASLN----------IG---G  291 (344)
Q Consensus       233 ~~~~----~~~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~-iv~~g~~-~~~~~~~~~~~----------~~---~  291 (344)
                      .+.+    ...+.  .+++|++||++|+..++..++.+++++|. ++..|.. ....++.....          .+   .
T Consensus        81 ~~~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~~  160 (175)
T d1cdoa2          81 NDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLHDVATRPIQLIAGRTWKGSMFGGFKG  160 (175)
T ss_dssp             GGCSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSSCEEECHHHHHTTCEEEECSGGGCCH
T ss_pred             CCcchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCCcccCccHHHHHCCcEEEEEEEeCCcH
Confidence            5432    22222  37899999999998888999999887754 4445544 22111111111          11   2


Q ss_pred             hHhHHHHHHHHHhCC
Q 019199          292 TKDTQEMLEYCAAHK  306 (344)
Q Consensus       292 ~~~~~~~~~~~~~g~  306 (344)
                      +++++++++++++|+
T Consensus       161 ~~d~~~~i~l~~~gK  175 (175)
T d1cdoa2         161 KDGVPKMVKAYLDKK  175 (175)
T ss_dssp             HHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHcCC
Confidence            467888888888875

>d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Putative zinc-binding alcohol dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.83  E-value=8.2e-21  Score=156.51  Aligned_cols=123  Identities=21%  Similarity=0.236  Sum_probs=101.6

Q ss_pred             CCcccccccchhhhHhHHHHHhccCCCCC--CEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcE
Q 019199          153 YPLALAAPLLCAGITVYTPMMRHKMNQPG--KSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADK  228 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~~~~~~~~g--~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~  228 (344)
                      +|+.+.| +++++.|||+++.....+++|  ++|||+|+ |++|++++|+||.+|+ +|+.+++++++...+.+++|+++
T Consensus         2 ~~~~~ga-lg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~   80 (187)
T d1vj1a2           2 LSYFLGA-IGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDA   80 (187)
T ss_dssp             GGGGGTT-TSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSE
T ss_pred             ccHHHHH-hhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceE
Confidence            4555554 788899999999999888887  88999986 9999999999999999 56667777777777767899999


Q ss_pred             EEeCCCHHH---HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          229 FVVSSDLEQ---MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       229 ~v~~~~~~~---~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+.+++.   +++. .+|+|++||++|++. ++.++++++++|+++.+|..
T Consensus        81 vi~~~~~~~~~~~~~~~~~GvDvv~D~vGg~~-~~~~~~~l~~~G~iv~~G~~  132 (187)
T d1vj1a2          81 AVNYKTGNVAEQLREACPGGVDVYFDNVGGDI-SNTVISQMNENSHIILCGQI  132 (187)
T ss_dssp             EEETTSSCHHHHHHHHCTTCEEEEEESSCHHH-HHHHHTTEEEEEEEEEC---
T ss_pred             EeeccchhHHHHHHHHhccCceEEEecCCchh-HHHHhhhccccccEEEeccc
Confidence            999987543   3333 368999999999875 99999999999999999864

>d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Alcohol dehydrogenase
species: Horse (Equus caballus) [TaxId: 9796]

Probab=99.83  E-value=8.4e-20  Score=149.02  Aligned_cols=152  Identities=21%  Similarity=0.296  Sum_probs=117.9

Q ss_pred             CcccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeC
Q 019199          154 PLALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVS  232 (344)
Q Consensus       154 ~~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~  232 (344)
                      ++++||+++|++.|+|+++.+..++++|++|||+|+|++|++++++++.+|+ +|++++.+++|++.+ +++|+++++++
T Consensus         2 Ple~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~GaGG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a-~~~Ga~~~i~~   80 (176)
T d2jhfa2           2 PLEKVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFAKA-KEVGATECVNP   80 (176)
T ss_dssp             CHHHHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEECSCGGGHHHH-HHTTCSEEECG
T ss_pred             CHHHHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECCCCcHHHHHHHHHHcCCceEEeecCcHHHHHHH-HHhCCeeEEec
Confidence            4678999999999999999888888999999999999999999999999997 999999999999888 79999999886


Q ss_pred             CCH----HH-HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEc-CCCc---cccCCceee---------eec--
Q 019199          233 SDL----EQ-MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVG-FPSK---VKFSPASLN---------IGG--  291 (344)
Q Consensus       233 ~~~----~~-~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g-~~~~---~~~~~~~~~---------~~~--  291 (344)
                      .+.    .. .... .+++|++||++|.+.+++.++..++++|+.+.++ ....   .......+.         .++  
T Consensus        81 ~~~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~Gs~~G~~~  160 (176)
T d2jhfa2          81 QDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDSQNLSMNPMLLLSGRTWKGAIFGGFK  160 (176)
T ss_dssp             GGCSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTTCCEEECTHHHHTTCEEEECSGGGCC
T ss_pred             CCchhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCCcccccccHHHHhCCCEEEEEEEeCCC
Confidence            432    12 2222 3789999999999988899999999975555554 3311   111111111         112  


Q ss_pred             -hHhHHHHHHHHHhCC
Q 019199          292 -TKDTQEMLEYCAAHK  306 (344)
Q Consensus       292 -~~~~~~~~~~~~~g~  306 (344)
                       +++++++++++.+||
T Consensus       161 ~~~~~~~li~~~~~GK  176 (176)
T d2jhfa2         161 SKDSVPKLVADFMAKK  176 (176)
T ss_dssp             HHHHHHHHHHHHHTTS
T ss_pred             HHHHHHHHHHHHHCcC
Confidence             467888888888775

>d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.81  E-value=1.4e-20  Score=153.03  Aligned_cols=123  Identities=20%  Similarity=0.263  Sum_probs=106.0

Q ss_pred             CCcccccccchhhhHhHHHH---HhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE
Q 019199          153 YPLALAAPLLCAGITVYTPM---MRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK  228 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l---~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (344)
                      +++.+||++++++.|||+++   .+.+....+++|||+|+ |++|.+++|+||.+|++|+++++++++.+.+ +++|+++
T Consensus         1 l~~~~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~-~~lGad~   79 (177)
T d1o89a2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGASR   79 (177)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTEEE
T ss_pred             CCHHHHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHH-Hhhcccc
Confidence            57899999999999999765   45555456679999987 9999999999999999999999999999888 7999999


Q ss_pred             EEeCCCHHHHHHhc-CCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          229 FVVSSDLEQMKALG-KSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       229 ~v~~~~~~~~~~~~-~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++++++.+..+.+. ...|.++|+++++. +...+++++++|+++.+|..
T Consensus        80 vi~~~~~~~~~~l~~~~~~~vvD~Vgg~~-~~~~l~~l~~~Griv~~G~~  128 (177)
T d1o89a2          80 VLPRDEFAESRPLEKQVWAGAIDTVGDKV-LAKVLAQMNYGGCVAACGLA  128 (177)
T ss_dssp             EEEGGGSSSCCSSCCCCEEEEEESSCHHH-HHHHHHTEEEEEEEEECCCT
T ss_pred             ccccccHHHHHHHHhhcCCeeEEEcchHH-HHHHHHHhccccceEeeccc
Confidence            99987654443333 45799999999876 99999999999999999976

>d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Formaldehyde dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=99.78  E-value=1.2e-18  Score=143.90  Aligned_cols=120  Identities=22%  Similarity=0.176  Sum_probs=103.8

Q ss_pred             ccccccchhhhHhHHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCC
Q 019199          156 ALAAPLLCAGITVYTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSD  234 (344)
Q Consensus       156 ~~aa~l~~~~~ta~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~  234 (344)
                      ++.++|+..+.|||+++..+ .+++|++|||+|+|++|++++++++.+|+ +|++++.+++|++.+ +++|+++++++.+
T Consensus         2 ~d~~~l~d~~~ta~~a~~~a-~v~~G~tVlV~GaG~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a-~~~Ga~~~~~~~~   79 (195)
T d1kola2           2 RDLTCLSDILPTGYHGAVTA-GVGPGSTVYVAGAGPVGLAAAASARLLGAAVVIVGDLNPARLAHA-KAQGFEIADLSLD   79 (195)
T ss_dssp             HHHGGGGTHHHHHHHHHHHT-TCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEESCHHHHHHH-HHTTCEEEETTSS
T ss_pred             chHHhcccHHHHHHHHHHHh-CCCCCCEEEEECcCHHHHHHHHHHHhhcccceeeecccchhhHhh-hhccccEEEeCCC
Confidence            35678899999999999765 55999999999999999999999999999 899999999999988 7999999998776


Q ss_pred             HHH---HHHhc--CCccEEEECCCC---------------chhHHHHHHhcccCCEEEEEcCC
Q 019199          235 LEQ---MKALG--KSLDFIIDTASG---------------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       235 ~~~---~~~~~--~~~dvvid~~g~---------------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+.   +.+++  .++|++||++|.               ..+++.+++.++++|+++.+|..
T Consensus        80 ~~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~  142 (195)
T d1kola2          80 TPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLY  142 (195)
T ss_dssp             SCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCC
T ss_pred             cCHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeec
Confidence            543   33333  589999999984               35699999999999999999975

>d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhfP
species: Bacillus subtilis [TaxId: 1423]

Probab=99.75  E-value=5.6e-19  Score=142.05  Aligned_cols=122  Identities=21%  Similarity=0.329  Sum_probs=97.7

Q ss_pred             hhhhHhH---HHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH-
Q 019199          163 CAGITVY---TPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ-  237 (344)
Q Consensus       163 ~~~~ta~---~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~-  237 (344)
                      +++.|||   ++|.+.+..+++++|||+|+ |++|.+++|+||.+|++|+.+++++++.+.+ +++|+++++++++... 
T Consensus         3 ~aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~-~~lGad~vi~~~~~~~~   81 (167)
T d1tt7a2           3 TAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYL-KQLGASEVISREDVYDG   81 (167)
T ss_dssp             HHHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHH-HHHTCSEEEEHHHHCSS
T ss_pred             ChHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHH-HhhcccceEeccchhch
Confidence            4556666   45666666677889999987 9999999999999999999999999999888 7999999988643211 


Q ss_pred             -HHHh-cCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC--CccccCCce
Q 019199          238 -MKAL-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP--SKVKFSPAS  286 (344)
Q Consensus       238 -~~~~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~--~~~~~~~~~  286 (344)
                       +.+. .+++|++||++|+.. +..++++|+++|+++.+|..  ...+++...
T Consensus        82 ~~~~~~~~gvd~vid~vgg~~-~~~~~~~l~~~G~iv~~G~~~g~~~~~~~~~  133 (167)
T d1tt7a2          82 TLKALSKQQWQGAVDPVGGKQ-LASLLSKIQYGGSVAVSGLTGGGEVPATVYP  133 (167)
T ss_dssp             CCCSSCCCCEEEEEESCCTHH-HHHHHTTEEEEEEEEECCCSSCSCEEECSHH
T ss_pred             hhhcccCCCceEEEecCcHHH-HHHHHHHhccCceEEEeeccCCCcccCCHHH
Confidence             1111 368999999999886 99999999999999999987  344444443

>d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: Alcohol dehydrogenase-like, N-terminal domain
domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase
species: Guinea pig (Cavia porcellus) [TaxId: 10141]

Probab=99.65  E-value=8.3e-16  Score=120.08  Aligned_cols=134  Identities=14%  Similarity=0.139  Sum_probs=99.5

Q ss_pred             ccceeeeeecCC------CCCccceeeccCCCCCCcEEEEEeeeecccchhhhhcCCCCCCCCCCCcccccceEEEEecC
Q 019199            7 SKDCLGWAARDP------SGVLSPYSFNRRAVGSDDVSITITHCGVCYADVIWTRNKHGDSKYPLVPGHEIVGIVKEVGH   80 (344)
Q Consensus         7 ~~~~~~~~~~~~------~~~~~~~~~~~p~~~~~evlV~v~~~~i~~~D~~~~~g~~~~~~~p~~~G~e~~G~V~~~G~   80 (344)
                      |++.++|.+...      .++|++++.++|+|++||||||+.|.++++........    .+...++..+++|+|++  |
T Consensus         1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip~~~~gevLvk~~~~svDp~~R~~~~~----~~~g~~~~g~~vg~Vv~--S   74 (147)
T d1v3va1           1 MVKAKSWTLKKHFQGKPTQSDFELKTVELPPLKNGEVLLEALFLSVDPYMRIASKR----LKEGAVMMGQQVARVVE--S   74 (147)
T ss_dssp             CCEEEEEEESSCCCSSCCGGGEEEEEEECCCCCTTCEEEEEEEEECCTHHHHHGGG----SCTTSBCCCCEEEEEEE--E
T ss_pred             CcccEEEEEccCCCCCCcccceEEEEEECCCCCCCEEEEEEEEEeEcccccccccc----cccCCccccceEEEEEE--e
Confidence            455666666442      24488999999999999999999999998766543321    22334566689999998  6


Q ss_pred             CCCCCCCCCEEEEeccccCCCCCccccCCCCCCCCccccccccccCCCCccCCcceeEEEEecceEEEcCCCCC-----c
Q 019199           81 NVSRFKVGDHVGVGTYVNSCRDCEYCNDGLEVHCARSVYTFNAIDADGTITKGGYSSYIVVHERYCYKIANDYP-----L  155 (344)
Q Consensus        81 ~~~~~~~Gd~V~~~~~~~~c~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~P~~~~-----~  155 (344)
                      +.++|++||+|..                                      .++|+||.+++++.+.++|++++     .
T Consensus        75 ~~~~f~~GD~V~g--------------------------------------~~gw~ey~v~~~~~l~kv~~~~~~~~~~~  116 (147)
T d1v3va1          75 KNSAFPAGSIVLA--------------------------------------QSGWTTHFISDGKGLEKLLTEWPDKKIQY  116 (147)
T ss_dssp             SCTTSCTTCEEEE--------------------------------------CCCSBSEEEECSSSCEECCTTCCTTSSCC
T ss_pred             CCCcccCCCEEEE--------------------------------------ccCCEeEEEeccceeeEccccccccccch
Confidence            7789999999952                                      36799999999999999987643     3


Q ss_pred             ccccccchhhhH-hHHHHHhccCCCCCCEEEE
Q 019199          156 ALAAPLLCAGIT-VYTPMMRHKMNQPGKSLGV  186 (344)
Q Consensus       156 ~~aa~l~~~~~t-a~~~l~~~~~~~~g~~vlI  186 (344)
                      ...+++...++| ||..+....  +.|++||+
T Consensus       117 ~~~~~lG~~Gmtaay~gl~~~~--k~Getvv~  146 (147)
T d1v3va1         117 HEHVTKGFENMPAAFIEMLNGA--NLGKAVVT  146 (147)
T ss_dssp             CEEEEECGGGHHHHHHHHHTTC--CSSEEEEE
T ss_pred             hhhHhccccchHHHHHHhhCCC--CCCCEEEe
Confidence            344567777777 454665444  67999986

>d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Alcohol dehydrogenase-like, C-terminal domain
domain: Hypothetical protein YhdH
species: Escherichia coli [TaxId: 562]

Probab=99.40  E-value=1.5e-13  Score=93.97  Aligned_cols=73  Identities=27%  Similarity=0.301  Sum_probs=64.5

Q ss_pred             CCcccccccchhhhHhHHHHH---hccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC
Q 019199          153 YPLALAAPLLCAGITVYTPMM---RHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA  226 (344)
Q Consensus       153 ~~~~~aa~l~~~~~ta~~~l~---~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~  226 (344)
                      +|++||+++++++.|||.++.   +....+++++|||+|+ |++|.+++|++|.+|++|+++++++++.+.+ +++|+
T Consensus         1 ls~~eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~-~~lGA   77 (77)
T d1o8ca2           1 LDARKAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYL-KSLGA   77 (77)
T ss_dssp             CCHHHHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHH-HHHTE
T ss_pred             CCHHHHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHH-HHCCC
Confidence            578999999999999987654   4455689999999987 9999999999999999999999999999888 67774

>d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: L-alanine dehydrogenase
species: Phormidium lapideum [TaxId: 32060]

Probab=98.42  E-value=5.6e-07  Score=69.84  Aligned_cols=98  Identities=15%  Similarity=0.199  Sum_probs=77.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc----
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD----  255 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~----  255 (344)
                      +..+|+|+|+|..|+.+++.|+.+|++|.+++.+.++++.+...++........+.+.+.+....+|+||.++--+    
T Consensus        31 ~pa~V~ViGaGvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~~l~~~~~~aDivI~aalipG~~a  110 (168)
T d1pjca1          31 KPGKVVILGGGVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSAEIETAVAEADLLIGAVLVPGRRA  110 (168)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHHHHHHHHHTCSEEEECCCCTTSSC
T ss_pred             CCcEEEEECCChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhhhHHHhhccCcEEEEeeecCCccc
Confidence            4578999999999999999999999999999999999998865565433333445555555556799999977422    


Q ss_pred             --hhHHHHHHhcccCCEEEEEcCC
Q 019199          256 --HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       256 --~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        ..-+.+++.++|++.+|++...
T Consensus       111 P~lIt~~mv~~Mk~GSVIVDvaid  134 (168)
T d1pjca1         111 PILVPASLVEQMRTGSVIVDVAVD  134 (168)
T ss_dssp             CCCBCHHHHTTSCTTCEEEETTCT
T ss_pred             CeeecHHHHhhcCCCcEEEEeecC
Confidence              1257899999999999998754

>d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Nicotinamide nucleotide transhydrogenase dI component
species: Rhodospirillum rubrum [TaxId: 1085]

Probab=98.26  E-value=3.1e-06  Score=66.46  Aligned_cols=97  Identities=22%  Similarity=0.206  Sum_probs=72.7

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC-CC----------------------HH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS-SD----------------------LE  236 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~-~~----------------------~~  236 (344)
                      +..+|+|+|+|..|+.++..|+.+|++|.+.|.+.++++.+ ++++...+... ..                      .+
T Consensus        28 ~pa~VvViGaGvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l-~~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~  106 (183)
T d1l7da1          28 PPARVLVFGVGVAGLQAIATAKRLGAVVMATDVRAATKEQV-ESLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE  106 (183)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCSTTHHHH-HHTTCEECCC-----------------------CCHHH
T ss_pred             CCcEEEEEcCcHHHHHHHHHHHHcCCEEEEEeccHHHHHHH-HHhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence            45689999999999999999999999999999999999999 67775433110 00                      11


Q ss_pred             HHHHhcCCccEEEECCCCc------hhHHHHHHhcccCCEEEEEcCC
Q 019199          237 QMKALGKSLDFIIDTASGD------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~g~~------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+.+.....|+||-++--+      ..-+.+++.|+|++.||++...
T Consensus       107 ~l~~~l~~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaid  153 (183)
T d1l7da1         107 AVLKELVKTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVE  153 (183)
T ss_dssp             HHHHHHTTCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGG
T ss_pred             HHHHHHHhhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeec
Confidence            1222236799999876422      1367899999999999998654

>d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylene-tetrahydromethanopterin dehydrogenase
species: Methylobacterium extorquens [TaxId: 408]

Probab=98.16  E-value=1.2e-05  Score=64.58  Aligned_cols=79  Identities=15%  Similarity=0.103  Sum_probs=64.6

Q ss_pred             cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-----CcEEEeCCCHHHHHHhcCCccEEE
Q 019199          176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----ADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       176 ~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-----~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      +.--.|+++||+|+ |++|..+...+...|++|++++++.++.+.+.+++.     .....|..+.+.+.+..+++|++|
T Consensus        18 ~~~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~iDili   97 (191)
T d1luaa1          18 GGSVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADDASRAEAVKGAHFVF   97 (191)
T ss_dssp             TSCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSHHHHHHHTTTCSEEE
T ss_pred             CCCCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccHHHHHHHhcCcCeee
Confidence            43358999999997 999999999999999999999999998776655443     245567778877777778899999


Q ss_pred             ECCCC
Q 019199          250 DTASG  254 (344)
Q Consensus       250 d~~g~  254 (344)
                      ++.|.
T Consensus        98 n~Ag~  102 (191)
T d1luaa1          98 TAGAI  102 (191)
T ss_dssp             ECCCT
T ss_pred             ecCcc
Confidence            99873

>d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=4.5e-05  Score=63.49  Aligned_cols=76  Identities=20%  Similarity=0.216  Sum_probs=61.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHh---cCCccEEEECC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKAL---GKSLDFIIDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~---~~~~dvvid~~  252 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++.+..  ..+|-.+++.+++.   -+++|+++++.
T Consensus         5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~g~iDilVnnA   84 (244)
T d1pr9a_           5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDWEATERALGSVGPVDLLVNNA   84 (244)
T ss_dssp             CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCCEEEECC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHhCCceEEEecc
Confidence            47899999998 99999999999999999999999999988887777642  34466666666554   26799999988


Q ss_pred             CC
Q 019199          253 SG  254 (344)
Q Consensus       253 g~  254 (344)
                      |.
T Consensus        85 g~   86 (244)
T d1pr9a_          85 AV   86 (244)
T ss_dssp             CC
T ss_pred             cc
Confidence            75

>d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase
species: Streptomyces hydrogenans [TaxId: 1905]

Probab=97.96  E-value=3.9e-05  Score=64.28  Aligned_cols=75  Identities=21%  Similarity=0.206  Sum_probs=59.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++...   ..|-.+++.++++       -+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   83 (254)
T d1hdca_           4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL   83 (254)
T ss_dssp             CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence            5889999998 899999999998999999999999999888878887432   3345555544332       2689999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        84 VnnAg~   89 (254)
T d1hdca_          84 VNNAGI   89 (254)
T ss_dssp             EECCCC
T ss_pred             EecCcc
Confidence            998874

>d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Escherichia coli [TaxId: 562]

Probab=97.93  E-value=3.1e-05  Score=64.53  Aligned_cols=98  Identities=22%  Similarity=0.250  Sum_probs=72.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++.++++++++.+.++++..   ...|-.+++.+++.       -+++|++
T Consensus         3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (243)
T d1q7ba_           3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL   82 (243)
T ss_dssp             TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence            5788999997 89999999999999999999999999988887777643   23455555444332       2689999


Q ss_pred             EECCCCc-------------------------hhHHHHHHhc--ccCCEEEEEcCC
Q 019199          249 IDTASGD-------------------------HPFDAYMSLL--KVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~  277 (344)
                      +++.|..                         ...+.++..|  +.+|+|+.++..
T Consensus        83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~  138 (243)
T d1q7ba_          83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSV  138 (243)
T ss_dssp             EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecch
Confidence            9988743                         1233455555  346999999765

>d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative oxidoreductase Rv2002
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.91  E-value=6.5e-05  Score=62.49  Aligned_cols=76  Identities=21%  Similarity=0.128  Sum_probs=60.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++...   ..|-.+++.+++.       .+++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idi   83 (244)
T d1nffa_           4 LTGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHV   83 (244)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeE
Confidence            46889999998 899999999999999999999999999988877887432   2355565544332       267999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        84 linnAG~   90 (244)
T d1nffa_          84 LVNNAGI   90 (244)
T ss_dssp             EEECCCC
T ss_pred             EEECCcc
Confidence            9999885

>d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamyl tRNA-reductase middle domain
species: Archaeon Methanopyrus kandleri [TaxId: 2320]

Probab=97.87  E-value=0.00013  Score=56.25  Aligned_cols=99  Identities=18%  Similarity=0.229  Sum_probs=68.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      -.+.++||+|+|.+|...++.+...|+ +++++.++.++.+.+.+++|.. .++..+   +.+....+|++|.|++.+..
T Consensus        22 l~~~~ilviGaG~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~~-~~~~~~---~~~~l~~~Divi~atss~~~   97 (159)
T d1gpja2          22 LHDKTVLVVGAGEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGGE-AVRFDE---LVDHLARSDVVVSATAAPHP   97 (159)
T ss_dssp             CTTCEEEEESCCHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTCE-ECCGGG---HHHHHHTCSEEEECCSSSSC
T ss_pred             cccCeEEEECCCHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhcc-cccchh---HHHHhccCCEEEEecCCCCc
Confidence            578899999999999999999999999 7999999988887777888854 333332   22223569999999986531


Q ss_pred             ------HHHHHHhcccCC--EEEEEcCCCccc
Q 019199          258 ------FDAYMSLLKVAG--VYVLVGFPSKVK  281 (344)
Q Consensus       258 ------~~~~~~~l~~~G--~iv~~g~~~~~~  281 (344)
                            +...++.-+.+.  .+++++.+.+.+
T Consensus        98 ii~~~~i~~~~~~r~~~~~~~iiDlavPr~vd  129 (159)
T d1gpja2          98 VIHVDDVREALRKRDRRSPILIIDIANPRDVE  129 (159)
T ss_dssp             CBCHHHHHHHHHHCSSCCCEEEEECCSSCSBC
T ss_pred             cccHhhhHHHHHhcccCCCeEEEeecCCCCcC
Confidence                  222222222222  567777665444

>d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein TTHA0369
species: Thermus thermophilus [TaxId: 274]

Probab=97.86  E-value=0.00011  Score=61.29  Aligned_cols=98  Identities=20%  Similarity=0.141  Sum_probs=71.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvi  249 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++.+++++..+.+ ++.+... ..|-.+.+.++++       -+++|+++
T Consensus         3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~-~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV   81 (248)
T d2d1ya1           3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVA-EAIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV   81 (248)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHH-HHHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred             cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHH-HHcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence            46899999997 8999999999999999999999998877666 5666543 3455565444332       26899999


Q ss_pred             ECCCCc-------------------------hhHHHHHHhccc--CCEEEEEcCC
Q 019199          250 DTASGD-------------------------HPFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       250 d~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                      ++.|..                         ...+.++..|+.  +|+||.++..
T Consensus        82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~  136 (248)
T d2d1ya1          82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASV  136 (248)
T ss_dssp             ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhcccccccccccccccccc
Confidence            988742                         123344455533  6899999765

>d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3beta/17beta hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=97.86  E-value=8.9e-05  Score=61.98  Aligned_cols=99  Identities=17%  Similarity=0.143  Sum_probs=73.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE---eCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV---VSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v---~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++.++++++++.+.++++....+   |-.+.+.+++.       -+++|+
T Consensus         4 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~iDi   83 (253)
T d1hxha_           4 LQGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNV   83 (253)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHhCCCCe
Confidence            36789999987 89999999999999999999999999988887888865443   33444433322       278999


Q ss_pred             EEECCCCc-------------------------hhHHHHHHhcc-cCCEEEEEcCC
Q 019199          248 IIDTASGD-------------------------HPFDAYMSLLK-VAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~-------------------------~~~~~~~~~l~-~~G~iv~~g~~  277 (344)
                      ++++.|..                         ...+.++..|+ .+|+||.++..
T Consensus        84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~  139 (253)
T d1hxha_          84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASV  139 (253)
T ss_dssp             EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCG
T ss_pred             EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccch
Confidence            99998843                         12334445554 57999999765

>d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.84  E-value=1.7e-05  Score=64.73  Aligned_cols=100  Identities=21%  Similarity=0.118  Sum_probs=68.9

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC---CCc-EEEeCCCHHHHHHhcCCccE
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---GAD-KFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~~-~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +...+++|++||-+|+|+ |+.++.+++..|.  +|+.++.+++..+.+.+.+   +.+ ..+...+........+.||+
T Consensus        69 ~~l~l~~g~~VLdiG~Gt-G~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~d~~~~~~~~~~fD~  147 (213)
T d1dl5a1          69 EWVGLDKGMRVLEIGGGT-GYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCGDGYYGVPEFSPYDV  147 (213)
T ss_dssp             HHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEE
T ss_pred             HhhhccccceEEEecCcc-chhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccCchHHccccccchhh
Confidence            444569999999999875 8888899998764  8999999988776664332   322 22211221111111256999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ++...+-....+.+++.|+|+|+++..
T Consensus       148 I~~~~~~~~~p~~l~~~LkpGG~lv~p  174 (213)
T d1dl5a1         148 IFVTVGVDEVPETWFTQLKEGGRVIVP  174 (213)
T ss_dssp             EEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred             hhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence            998777655467889999999999873

>d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=97.81  E-value=2.3e-05  Score=63.89  Aligned_cols=100  Identities=21%  Similarity=0.211  Sum_probs=69.3

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCc-EEEeCCCHHHHHHhcCCccEEE
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGAD-KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~-~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      +...+++|++||.+|+|+ |+.++.+++..|.+|+.++..++-.+.+   .+++|.+ ..+...+...-......||.++
T Consensus        72 ~~L~l~~g~~VLeIGsGs-GY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~gd~~~g~~~~~pfD~Ii  150 (215)
T d1jg1a_          72 EIANLKPGMNILEVGTGS-GWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILGDGSKGFPPKAPYDVII  150 (215)
T ss_dssp             HHHTCCTTCCEEEECCTT-SHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEESCGGGCCGGGCCEEEEE
T ss_pred             HhhccCccceEEEecCCC-ChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEECccccCCcccCcceeEE
Confidence            444569999999999864 8888899998888899999987644333   2455643 2222222111011136799998


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEE
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      -+.+.+..-..+++.|+++|+++..
T Consensus       151 v~~a~~~ip~~l~~qL~~gGrLv~p  175 (215)
T d1jg1a_         151 VTAGAPKIPEPLIEQLKIGGKLIIP  175 (215)
T ss_dssp             ECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             eecccccCCHHHHHhcCCCCEEEEE
Confidence            8776655567899999999999864

>d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Gluconate 5-dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=97.77  E-value=0.00029  Score=58.65  Aligned_cols=98  Identities=24%  Similarity=0.209  Sum_probs=69.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH----HhCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL----SLLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~----~~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++...    ++.|...   ..|-.+++.+.++       -++
T Consensus         4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   83 (251)
T d1vl8a_           4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK   83 (251)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            5789999998 89999999999999999999999988765443    3445432   2355565544332       268


Q ss_pred             ccEEEECCCCc-------------------------hhHHHHHHhcc--cCCEEEEEcCC
Q 019199          245 LDFIIDTASGD-------------------------HPFDAYMSLLK--VAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~-------------------------~~~~~~~~~l~--~~G~iv~~g~~  277 (344)
                      +|+++++.|..                         ...+.++..|+  .+|+++.++..
T Consensus        84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~  143 (251)
T d1vl8a_          84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSL  143 (251)
T ss_dssp             CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCG
T ss_pred             CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccc
Confidence            99999998843                         12334555563  46899999754

>d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Xylitol dehydrogenase
species: Gluconobacter oxydans [TaxId: 442]

Probab=97.72  E-value=0.00015  Score=60.86  Aligned_cols=98  Identities=19%  Similarity=0.172  Sum_probs=69.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.++   .|.+.   ..|-.+++.++++       -+++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (260)
T d1zema1           4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI   83 (260)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999998 8999999999999999999999998887665444   34332   2344555444332       2689


Q ss_pred             cEEEECCCCc--------------------------hhHHHHHHhc--ccCCEEEEEcCC
Q 019199          246 DFIIDTASGD--------------------------HPFDAYMSLL--KVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~--------------------------~~~~~~~~~l--~~~G~iv~~g~~  277 (344)
                      |+++++.|..                          ...+.++..+  +.+|++|.++..
T Consensus        84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~  143 (260)
T d1zema1          84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASM  143 (260)
T ss_dssp             CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeech
Confidence            9999988732                          1223344434  567999999754

>d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.72  E-value=7.9e-05  Score=61.87  Aligned_cols=75  Identities=20%  Similarity=0.160  Sum_probs=60.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHh---cCCccEEEECCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~---~~~~dvvid~~g  253 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++.+..  ..+|-.+++.+++.   -+++|+++++.|
T Consensus         4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~g~iDilVnnAg   83 (242)
T d1cyda_           4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDWDATEKALGGIGPVDLLVNNAA   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHTTCCCCSEEEECCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCHHHHHHHHHHcCCCeEEEECCc
Confidence            5889999998 89999999999999999999999999988887777632  33455666665554   267999999887


Q ss_pred             C
Q 019199          254 G  254 (344)
Q Consensus       254 ~  254 (344)
                      .
T Consensus        84 ~   84 (242)
T d1cyda_          84 L   84 (242)
T ss_dssp             C
T ss_pred             c
Confidence            4

>d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn Mja218
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=97.71  E-value=0.00021  Score=53.20  Aligned_cols=74  Identities=14%  Similarity=0.210  Sum_probs=61.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDH  256 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~  256 (344)
                      +|+|.|.|.+|...++.+...|..|++++.++++.+.+.++++...+. |..+++.+.+.. ..+|.++-+++...
T Consensus         2 ~IvI~G~G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~vi~Gd~~~~~~l~~~~i~~a~~vv~~t~~d~   77 (132)
T d1lssa_           2 YIIIAGIGRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKIKTLEDAGIEDADMYIAVTGKEE   77 (132)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhhhccCcccchhhhhhcChhhhhhhcccCCcHH
Confidence            588999999999999999999999999999999998886667755433 456677777775 78999999888764

>d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.69  E-value=0.0001  Score=61.13  Aligned_cols=75  Identities=17%  Similarity=0.171  Sum_probs=60.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHh-------cCCccEEEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKAL-------GKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~-------~~~~dvvid  250 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+++++.. ..|-.+++.+++.       -+++|++++
T Consensus         4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDilVn   83 (242)
T d1ulsa_           4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH   83 (242)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhcCCceEEEE
Confidence            5789999997 899999999999999999999999999988877777543 3455665544432       267999999


Q ss_pred             CCCC
Q 019199          251 TASG  254 (344)
Q Consensus       251 ~~g~  254 (344)
                      +.|.
T Consensus        84 nAG~   87 (242)
T d1ulsa_          84 YAGI   87 (242)
T ss_dssp             CCCC
T ss_pred             CCcc
Confidence            9874

>d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermus thermophilus, TTHB020 [TaxId: 274]

Probab=97.69  E-value=0.00024  Score=58.84  Aligned_cols=76  Identities=22%  Similarity=0.237  Sum_probs=60.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE---EeCCCHHHHHHh-------cCCccE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---VVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---v~~~~~~~~~~~-------~~~~dv  247 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++.+..   .|-++++.++++       .+++|+
T Consensus         3 l~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDi   82 (241)
T d2a4ka1           3 LSGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHG   82 (241)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccE
Confidence            46889999998 8999999999999999999999999999888888886432   355555554432       268999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.+.
T Consensus        83 LinnAg~   89 (241)
T d2a4ka1          83 VAHFAGV   89 (241)
T ss_dssp             EEEGGGG
T ss_pred             ecccccc
Confidence            9998763

>d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 17-beta-hydroxysteroid dehydrogenase type XI
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=0.00014  Score=60.31  Aligned_cols=99  Identities=17%  Similarity=0.195  Sum_probs=70.1

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc---EEEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      -.|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.++   .|..   ...|..+.+.+.+.       .++
T Consensus         5 l~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~   84 (244)
T d1yb1a_           5 VTGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGD   84 (244)
T ss_dssp             CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCC
Confidence            36899999998 8999999888888999999999999987665443   4432   23355665544332       367


Q ss_pred             ccEEEECCCCc-------------------------hhHHHHHHhccc--CCEEEEEcCC
Q 019199          245 LDFIIDTASGD-------------------------HPFDAYMSLLKV--AGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~-------------------------~~~~~~~~~l~~--~G~iv~~g~~  277 (344)
                      +|+++++.|..                         ...+.++..++.  .|+|+.++..
T Consensus        85 idilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~  144 (244)
T d1yb1a_          85 VSILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASA  144 (244)
T ss_dssp             CSEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecc
Confidence            99999999853                         123344444533  5889988766

>d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), II [TaxId: 4076]

Probab=97.65  E-value=0.00027  Score=59.19  Aligned_cols=75  Identities=20%  Similarity=0.195  Sum_probs=55.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcE---EEeCCCHHHHHHh--------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADK---FVVSSDLEQMKAL--------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~---~v~~~~~~~~~~~--------~~~  244 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++.++++++++.+.+++   |...   ..|-.+++.++++        ...
T Consensus         7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~   86 (259)
T d2ae2a_           7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK   86 (259)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence            6889999998 89999999999999999999999998876664443   3322   2344555443322        246


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        87 idilvnnAG~   96 (259)
T d2ae2a_          87 LNILVNNAGI   96 (259)
T ss_dssp             CCEEEECCCC
T ss_pred             ceEEEECCce
Confidence            9999999884

>d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Levodione reductase
species: Corynebacterium aquaticum [TaxId: 144185]

Probab=97.62  E-value=0.00059  Score=56.93  Aligned_cols=74  Identities=20%  Similarity=0.203  Sum_probs=55.1

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC-----CCcE---EEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL-----GADK---FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~-----g~~~---~v~~~~~~~~~~~-------~~  243 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+++     +...   ..|-.+++.++++       -+
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G   82 (258)
T d1iy8a_           3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG   82 (258)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence            5788999998 89999999999999999999999988766553332     2222   2355666554432       26


Q ss_pred             CccEEEECCC
Q 019199          244 SLDFIIDTAS  253 (344)
Q Consensus       244 ~~dvvid~~g  253 (344)
                      ++|+++++.|
T Consensus        83 ~iDiLVnnAG   92 (258)
T d1iy8a_          83 RIDGFFNNAG   92 (258)
T ss_dssp             CCSEEEECCC
T ss_pred             CCCEEEECCc
Confidence            8999999887

>d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative dehydrogenase ARPG836 (MGC4172)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.62  E-value=0.00026  Score=59.23  Aligned_cols=75  Identities=21%  Similarity=0.205  Sum_probs=55.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC-cE----EEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA-DK----FVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~-~~----~v~~~~~~~~~~~-------~~  243 (344)
                      +|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.+++   +. ..    ..|-.+++.+.++       .+
T Consensus         9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~g   88 (257)
T d1xg5a_           9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS   88 (257)
T ss_dssp             TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence            4788999998 89999999999999999999999988876654433   21 12    2355665544332       27


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        89 ~iD~lVnnAg~   99 (257)
T d1xg5a_          89 GVDICINNAGL   99 (257)
T ss_dssp             CCSEEEECCCC
T ss_pred             CCCEEEecccc
Confidence            89999999875

>d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Retinal dehydrogenase/reductase 3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=0.00014  Score=60.57  Aligned_cols=75  Identities=21%  Similarity=0.201  Sum_probs=59.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE--EEeCCCHHHHHHh-------cCCccEE
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK--FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~--~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++.++++++++.+.++++...  ..|-.+++.++++       -+++|++
T Consensus         4 l~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDil   83 (250)
T d1ydea1           4 YAGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCV   83 (250)
T ss_dssp             TTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence            36899999998 999999999999999999999999999988877766422  2355565554433       2679999


Q ss_pred             EECCC
Q 019199          249 IDTAS  253 (344)
Q Consensus       249 id~~g  253 (344)
                      +++.|
T Consensus        84 VnnAG   88 (250)
T d1ydea1          84 VNNAG   88 (250)
T ss_dssp             EECCC
T ss_pred             Eeccc
Confidence            99887

>d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase-like protein HI0607
species: Haemophilus influenzae [TaxId: 727]

Probab=97.60  E-value=0.00015  Score=56.42  Aligned_cols=74  Identities=16%  Similarity=0.252  Sum_probs=57.6

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      .+..... .++.+|||+|+|+.+.+++..++..|+ +|.++.|+.++.+.+.+.++...+ +...       ...+|+++
T Consensus         8 ~l~~~~~-~~~~~vlIlGaGGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~-------~~~~DliI   78 (167)
T d1npya1           8 LIEKYHL-NKNAKVIVHGSGGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE-------NQQADILV   78 (167)
T ss_dssp             HHHHTTC-CTTSCEEEECSSTTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT-------TCCCSEEE
T ss_pred             HHHHcCC-CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc-------ccchhhhe
Confidence            4554554 678899999999999999999999998 899999999988888677775432 2211       14589999


Q ss_pred             ECCC
Q 019199          250 DTAS  253 (344)
Q Consensus       250 d~~g  253 (344)
                      +|+.
T Consensus        79 NaTp   82 (167)
T d1npya1          79 NVTS   82 (167)
T ss_dssp             ECSS
T ss_pred             eccc
Confidence            9876

>d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.60  E-value=0.00022  Score=59.78  Aligned_cols=75  Identities=25%  Similarity=0.309  Sum_probs=55.6

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh--------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL--------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~--------~~~  244 (344)
                      +|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.+++   +..   ...|-.+++.+.++        .+.
T Consensus         7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~   86 (259)
T d1xq1a_           7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK   86 (259)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence            5889999987 89999999999999999999999998876664443   322   22355555433321        256


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        87 idilvnnAG~   96 (259)
T d1xq1a_          87 LDILINNLGA   96 (259)
T ss_dssp             CSEEEEECCC
T ss_pred             cccccccccc
Confidence            9999999885

>d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=8.1e-05  Score=61.00  Aligned_cols=96  Identities=19%  Similarity=0.181  Sum_probs=66.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC---CC-------cEEEeCCCHHHHHHhcCC
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---GA-------DKFVVSSDLEQMKALGKS  244 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~-------~~~v~~~~~~~~~~~~~~  244 (344)
                      .+++|++||-+|+|+ |+.++.+++..|.  +|+.++..++-.+.+++.+   +.       ..++..+.... ......
T Consensus        73 ~l~~g~~VLdiG~Gs-Gy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD~~~~-~~~~~~  150 (224)
T d1i1na_          73 QLHEGAKALDVGSGS-GILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGDGRMG-YAEEAP  150 (224)
T ss_dssp             TSCTTCEEEEETCTT-SHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESCGGGC-CGGGCC
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEeecccc-cchhhh
Confidence            469999999999874 8888899988763  8999999988766553332   11       11121111100 011256


Q ss_pred             ccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          245 LDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       245 ~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ||+++-+...+.....+++.|+|+|+++..
T Consensus       151 fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p  180 (224)
T d1i1na_         151 YDAIHVGAAAPVVPQALIDQLKPGGRLILP  180 (224)
T ss_dssp             EEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence            999998776666578899999999999874

>d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sorbitol dehydrogenase
species: Rhodobacter sphaeroides [TaxId: 1063]

Probab=97.60  E-value=0.00013  Score=61.09  Aligned_cols=75  Identities=16%  Similarity=0.205  Sum_probs=60.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+++|...   ..|-.+++.++++       -+++|++
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil   83 (256)
T d1k2wa_           4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL   83 (256)
T ss_dssp             TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            5788999998 999999999999999999999999999988888888543   3355565544432       2689999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        84 VnnAg~   89 (256)
T d1k2wa_          84 VNNAAL   89 (256)
T ss_dssp             EECCCC
T ss_pred             Eeeccc
Confidence            999884

>d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dehydrogenase/reductase SDR family member 6, DHRS6
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=0.0002  Score=59.49  Aligned_cols=77  Identities=19%  Similarity=0.156  Sum_probs=57.7

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHH---hcCCccEEEECCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKA---LGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~---~~~~~dvvid~~g  253 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++++.+..+... ..|....+..+.   ..+++|+++++.|
T Consensus         4 l~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~id~lVn~ag   83 (245)
T d2ag5a1           4 LDGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKKKQIDQFANEVERLDVLFNVAG   83 (245)
T ss_dssp             TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCHHHHHHHHHHCSCCSEEEECCC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeeccccccccccccccccceeEEeccc
Confidence            36788999987 999999999999999999999999998887755555432 233344433332   2478999999887


Q ss_pred             Cc
Q 019199          254 GD  255 (344)
Q Consensus       254 ~~  255 (344)
                      ..
T Consensus        84 ~~   85 (245)
T d2ag5a1          84 FV   85 (245)
T ss_dssp             CC
T ss_pred             cc
Confidence            53

>d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Sulfolobus tokodaii [TaxId: 111955]

Probab=97.58  E-value=0.00011  Score=60.16  Aligned_cols=98  Identities=17%  Similarity=0.135  Sum_probs=67.4

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCccEEEE
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      +...+++|++||-+|+| .|+.++.+++. +.+|+.++..++..+.+.+.+..   ..++..+...... ..+.||.++-
T Consensus        64 ~~L~l~~g~~VLdIG~G-sGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~d~~~g~~-~~~pfD~Iiv  140 (224)
T d1vbfa_          64 DELDLHKGQKVLEIGTG-IGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILGDGTLGYE-EEKPYDRVVV  140 (224)
T ss_dssp             HHTTCCTTCEEEEECCT-TSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEESCGGGCCG-GGCCEEEEEE
T ss_pred             HHhhhcccceEEEecCC-CCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccCchhhcch-hhhhHHHHHh
Confidence            44456999999999987 47778778875 57899999998877777444331   1222222111111 1256999987


Q ss_pred             CCCCchhHHHHHHhcccCCEEEEE
Q 019199          251 TASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       251 ~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +.+.+.....++++|+++|+++..
T Consensus       141 ~~a~~~ip~~l~~qLk~GGrLV~p  164 (224)
T d1vbfa_         141 WATAPTLLCKPYEQLKEGGIMILP  164 (224)
T ss_dssp             SSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred             hcchhhhhHHHHHhcCCCCEEEEE
Confidence            666666577889999999999874

>d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=97.56  E-value=0.00024  Score=59.23  Aligned_cols=98  Identities=15%  Similarity=0.131  Sum_probs=68.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~  245 (344)
                      .|+.+||+|+ +++|.+.+..+...|++|+++++++++++.+.++   .|...   ..|-.+++.+.++       -+++
T Consensus         9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~i   88 (251)
T d2c07a1           9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV   88 (251)
T ss_dssp             SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhcCCc
Confidence            5788899998 8999999998888999999999998877655443   44332   3355555544332       3689


Q ss_pred             cEEEECCCCc-------------------------hhHHHHHHhc--ccCCEEEEEcCC
Q 019199          246 DFIIDTASGD-------------------------HPFDAYMSLL--KVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~  277 (344)
                      |+++++.|..                         ...+.++..+  +.+|+||.++..
T Consensus        89 Dilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  147 (251)
T d2c07a1          89 DILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSI  147 (251)
T ss_dssp             CEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             eeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCH
Confidence            9999988753                         1223334444  446999999865

>d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (s)-1-phenylethanol dehydrogenase
species: Azoarcus sp. ebn1 [TaxId: 76114]

Probab=97.56  E-value=0.00058  Score=56.59  Aligned_cols=75  Identities=17%  Similarity=0.169  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++.+++++ +.+...++.|...   ..|-.+++.++++       -+++|+
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi   83 (247)
T d2ew8a1           4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI   83 (247)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence            5788999998 89999999999999999999998764 3444446677533   2355565544332       268999


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      ++++.|.
T Consensus        84 lVnnAG~   90 (247)
T d2ew8a1          84 LVNNAGI   90 (247)
T ss_dssp             EEECCCC
T ss_pred             EEECCCC
Confidence            9999885

>d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Escherichia coli [TaxId: 562]

Probab=97.55  E-value=9.1e-05  Score=57.94  Aligned_cols=81  Identities=22%  Similarity=0.313  Sum_probs=59.7

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCc
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~  245 (344)
                      ..+|.+.+...+|++|||+|+|+.+.+++..+..+|++|+++.|+.++.+.+.+.+..   ...+...+     .....+
T Consensus         6 ~~~l~~~~~~~~~k~vlIlGaGGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~~~-----~~~~~~   80 (170)
T d1nyta1           6 LSDLERLSFIRPGLRILLIGAGGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSMDE-----LEGHEF   80 (170)
T ss_dssp             HHHHHHHTCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCSGG-----GTTCCC
T ss_pred             HHHHHHcCCCCCCCEEEEECCcHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccccc-----cccccc
Confidence            3456666655789999999999999999999999999999999999988777666652   12222211     112568


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |++++|+..
T Consensus        81 dliIN~Tp~   89 (170)
T d1nyta1          81 DLIINATSS   89 (170)
T ss_dssp             SEEEECCSC
T ss_pred             ceeeccccc
Confidence            999999864

>d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Rhizome secoisolariciresinol dehydrogenase
species: Mayapple (Podophyllum peltatum) [TaxId: 35933]

Probab=97.53  E-value=0.00023  Score=59.96  Aligned_cols=76  Identities=17%  Similarity=0.253  Sum_probs=58.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---c--EEEeCCCHHHHHHh-------cCCc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---D--KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~--~~v~~~~~~~~~~~-------~~~~  245 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++.   .  ...|-.+++.+++.       -+++
T Consensus         4 L~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i   83 (268)
T d2bgka1           4 LQDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKL   83 (268)
T ss_dssp             TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCc
Confidence            46889999998 8999999999999999999999999988877666652   1  12355565544432       2689


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        84 D~lVnnAG~   92 (268)
T d2bgka1          84 DIMFGNVGV   92 (268)
T ss_dssp             CEEEECCCC
T ss_pred             ceecccccc
Confidence            999998873

>d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase
species: Pseudomonas sp., lb400 [TaxId: 306]

Probab=97.51  E-value=0.00014  Score=61.56  Aligned_cols=74  Identities=27%  Similarity=0.244  Sum_probs=58.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.+++|...   ..|..+.+.+++.       -+++|++
T Consensus         4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil   83 (276)
T d1bdba_           4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL   83 (276)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence            5899999998 999999999999999999999999999888877777432   2344555444332       2689999


Q ss_pred             EECCC
Q 019199          249 IDTAS  253 (344)
Q Consensus       249 id~~g  253 (344)
                      +++.|
T Consensus        84 vnnAG   88 (276)
T d1bdba_          84 IPNAG   88 (276)
T ss_dssp             ECCCC
T ss_pred             ccccc
Confidence            99887

>d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.50  E-value=0.00013  Score=61.72  Aligned_cols=97  Identities=24%  Similarity=0.323  Sum_probs=67.1

Q ss_pred             CCEE-EEECC-ChHHHHHHH-HHHHCCCeEEEEeCCchhHHHHHHhC---CCc---EEEeCCCHHHHHHh-------cCC
Q 019199          181 GKSL-GVIGL-GGLGHMAVK-FGKAFGLNVTVLSTSTSKKEEALSLL---GAD---KFVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       181 g~~v-lI~Ga-g~~G~~ai~-~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~---~~v~~~~~~~~~~~-------~~~  244 (344)
                      |.+| ||+|+ +++|++.++ +++..|++|+++++++++++.+.+++   |..   ...|-.+.+.+++.       .++
T Consensus         2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~g~   81 (275)
T d1wmaa1           2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG   81 (275)
T ss_dssp             CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhcCC
Confidence            5667 66787 899998775 55666899999999999877665444   322   22355565544332       368


Q ss_pred             ccEEEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+++++.|..                         ...+.++..|++.|+++.++..
T Consensus        82 iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~  139 (275)
T d1wmaa1          82 LDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSI  139 (275)
T ss_dssp             EEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCH
T ss_pred             cEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccc
Confidence            99999998842                         1234456667889999998753

>d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Saccharopine reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.49  E-value=0.00033  Score=54.64  Aligned_cols=96  Identities=15%  Similarity=0.097  Sum_probs=70.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC--CCHHHHHHhcCCccEEEECCCCchhH
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS--SDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~--~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      +++|+|+|+|.+|..+++.+...|.+|++++++.++...+.+.++...+...  .............|.++.+.......
T Consensus         2 ~K~IliiGaG~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~i~~~~~~~~~   81 (182)
T d1e5qa1           2 TKSVLMLGSGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDDAALDAEVAKHDLVISLIPYTFHA   81 (182)
T ss_dssp             CCEEEEECCSTTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEEEECCTTCHHHHHHHHTTSSEEEECSCGGGHH
T ss_pred             CCEEEEECCCHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhcccccccccccccchhhhHhhhhccceeEeeccchhhh
Confidence            5789999999999999999988899999999999999988666664333222  22333334446788888888776655


Q ss_pred             HHHHHhcccCCEEEEEcC
Q 019199          259 DAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~  276 (344)
                      ..+..+++.+..++....
T Consensus        82 ~~~~~~~~~~~~~~~~~~   99 (182)
T d1e5qa1          82 TVIKSAIRQKKHVVTTSY   99 (182)
T ss_dssp             HHHHHHHHHTCEEECSSC
T ss_pred             HHHHHHHhhccceeeccc
Confidence            566666677777766654

>d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD
species: Escherichia coli [TaxId: 562]

Probab=97.44  E-value=0.00022  Score=49.58  Aligned_cols=71  Identities=24%  Similarity=0.274  Sum_probs=50.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      .|.+|+|+|.|..|+++++++...|++|++.+.+...  ...+  +.+....+...+...+.    ++|.++-+.|-+.
T Consensus         4 ~~K~v~ViGlG~sG~s~a~~L~~~g~~v~~~D~~~~~~~~~~~--~~~~~~~~~~~~~~~~~----~~d~vi~SPGi~~   76 (93)
T d2jfga1           4 QGKNVVIIGLGLTGLSCVDFFLARGVTPRVMDTRMTPPGLDKL--PEAVERHTGSLNDEWLM----AADLIVASPGIAL   76 (93)
T ss_dssp             TTCCEEEECCSHHHHHHHHHHHHTTCCCEEEESSSSCTTGGGS--CTTSCEEESBCCHHHHH----HCSEEEECTTSCT
T ss_pred             CCCEEEEEeECHHHHHHHHHHHHCCCEEEEeeCCcCchhHHHH--hhccceeecccchhhhc----cCCEEEECCCCCC
Confidence            5678999999999999999999999999999986552  2222  12334444444444433    4899998888665

>d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 15-hydroxyprostaglandin dehydrogenase, PGDH
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=0.00035  Score=58.22  Aligned_cols=98  Identities=15%  Similarity=0.135  Sum_probs=68.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-----Cc---EEEeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-----AD---KFVVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-----~~---~~v~~~~~~~~~~~-------~~  243 (344)
                      .|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.+++.     ..   ...|-.+++.++++       -+
T Consensus         2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   81 (254)
T d2gdza1           2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG   81 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence            5789999998 899999999999999999999999988766644432     12   22355665544432       26


Q ss_pred             CccEEEECCCCch-----------------hHHHHHHhccc-----CCEEEEEcCC
Q 019199          244 SLDFIIDTASGDH-----------------PFDAYMSLLKV-----AGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~~-----------------~~~~~~~~l~~-----~G~iv~~g~~  277 (344)
                      ++|+++++.|...                 ....++..+++     +|+|+.++..
T Consensus        82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~  137 (254)
T d2gdza1          82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSL  137 (254)
T ss_dssp             CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCG
T ss_pred             CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccH
Confidence            8999999998531                 12233344432     4889999765

>d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: D(-)-3-hydroxybutyrate dehydrogenase
species: Pseudomonas fragi [TaxId: 296]

Probab=97.39  E-value=0.00098  Score=55.61  Aligned_cols=98  Identities=19%  Similarity=0.193  Sum_probs=66.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHH----HhCCCcEE---EeCCCHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEAL----SLLGADKF---VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~----~~~g~~~~---v~~~~~~~~~~~-------~~  243 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++++++++ +++.+.    +..|....   .|-.+++.++++       .+
T Consensus         3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G   82 (260)
T d1x1ta1           3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG   82 (260)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred             CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHhC
Confidence            6788999987 89999999999999999999998753 443332    23454433   244555544332       26


Q ss_pred             CccEEEECCCCc-------------------------hhHHHHHHhcc--cCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD-------------------------HPFDAYMSLLK--VAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~-------------------------~~~~~~~~~l~--~~G~iv~~g~~  277 (344)
                      ++|+++++.|..                         ...+.++..++  .+|+||.++..
T Consensus        83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~  143 (260)
T d1x1ta1          83 RIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASA  143 (260)
T ss_dssp             CCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             CCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccc
Confidence            899999998843                         12334444453  36899999765

>d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: R-specific alcohol dehydrogenase
species: Lactobacillus brevis [TaxId: 1580]

Probab=97.36  E-value=0.00032  Score=58.35  Aligned_cols=76  Identities=20%  Similarity=0.111  Sum_probs=57.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c---EEEeCCCHHHHHHh-------cCCc
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D---KFVVSSDLEQMKAL-------GKSL  245 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~---~~v~~~~~~~~~~~-------~~~~  245 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++.  .   ...|-.+++.+.++       -+++
T Consensus         4 L~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i   83 (251)
T d1zk4a1           4 LDGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPV   83 (251)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHhCCc
Confidence            35889999987 9999999999999999999999999988877666542  1   12345555444332       2789


Q ss_pred             cEEEECCCC
Q 019199          246 DFIIDTASG  254 (344)
Q Consensus       246 dvvid~~g~  254 (344)
                      |+++++.|.
T Consensus        84 DiLVnnAg~   92 (251)
T d1zk4a1          84 STLVNNAGI   92 (251)
T ss_dssp             CEEEECCCC
T ss_pred             eEEEecccc
Confidence            999998875

>d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 11-beta-hydroxysteroid dehydrogenase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.35  E-value=0.001  Score=55.70  Aligned_cols=76  Identities=22%  Similarity=0.222  Sum_probs=53.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcEEE---eCCCHHHHHH-------hcC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADKFV---VSSDLEQMKA-------LGK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~~v---~~~~~~~~~~-------~~~  243 (344)
                      -+|+++||+|+ +++|++.+..+...|++|+++++++++++.+.++    .+.....   +..+......       ..+
T Consensus        12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   91 (269)
T d1xu9a_          12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMG   91 (269)
T ss_dssp             GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHT
T ss_pred             cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhHHHHHHHHHHHHHHhC
Confidence            46899999998 8999999999988999999999999988766443    3332222   2233322221       236


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ..|+++++.|.
T Consensus        92 ~~~~li~nag~  102 (269)
T d1xu9a_          92 GLDMLILNHIT  102 (269)
T ss_dssp             SCSEEEECCCC
T ss_pred             Ccccccccccc
Confidence            78999887764

>d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Tropinone reductase
species: Jimsonweed (Datura stramonium), I [TaxId: 4076]

Probab=97.31  E-value=0.00041  Score=57.94  Aligned_cols=76  Identities=20%  Similarity=0.215  Sum_probs=56.3

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh--------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL--------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~--------~~~  244 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++   .+...   ..|-.+.+.++++        .+.
T Consensus         5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~   84 (258)
T d1ae1a_           5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK   84 (258)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence            6899999997 9999999999999999999999999877665444   34332   2355555443332        256


Q ss_pred             ccEEEECCCCc
Q 019199          245 LDFIIDTASGD  255 (344)
Q Consensus       245 ~dvvid~~g~~  255 (344)
                      .|+++++.|..
T Consensus        85 idilinnag~~   95 (258)
T d1ae1a_          85 LNILVNNAGVV   95 (258)
T ss_dssp             CCEEEECCCCC
T ss_pred             cEEEecccccc
Confidence            89999988753

>d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ribosomal protein L11 methyltransferase PrmA
domain: PrmA-like protein TTHA0656 (TT0836)
species: Thermus thermophilus [TaxId: 274]

Probab=97.29  E-value=0.0016  Score=54.02  Aligned_cols=95  Identities=19%  Similarity=0.218  Sum_probs=63.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC-cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA-DKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .++|++||-+|+|+ |..++.+++ .|++|++++.+++..+.+++   ..|. ..++.....+.  ...+.||+|+....
T Consensus       118 ~~~g~~VLDiGcGs-G~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~d~~~~--~~~~~fD~V~ani~  193 (254)
T d2nxca1         118 LRPGDKVLDLGTGS-GVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEGSLEAA--LPFGPFDLLVANLY  193 (254)
T ss_dssp             CCTTCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEESCHHHH--GGGCCEEEEEEECC
T ss_pred             cCccCEEEEcccch-hHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEecccccc--ccccccchhhhccc
Confidence            37999999999864 666666554 68999999999987766642   3343 23333222221  12367999986544


Q ss_pred             Cc---hhHHHHHHhcccCCEEEEEcC
Q 019199          254 GD---HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       254 ~~---~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      ..   ..++.+.+.|+|+|++++.|.
T Consensus       194 ~~~l~~l~~~~~~~LkpGG~lilSgi  219 (254)
T d2nxca1         194 AELHAALAPRYREALVPGGRALLTGI  219 (254)
T ss_dssp             HHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccHHHHHHHHHHhcCCCcEEEEEec
Confidence            32   224567788999999998764

>d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=97.27  E-value=0.00065  Score=55.46  Aligned_cols=97  Identities=20%  Similarity=0.243  Sum_probs=66.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC---CCcEEE--eCCCHHHHHHhcCCccEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---GADKFV--VSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g~~~~v--~~~~~~~~~~~~~~~dvvi  249 (344)
                      .++||++||=+|+|+ |..+..+++..|.  +|++++.+++..+.+.+..   +....+  +...++........+|+++
T Consensus        70 ~i~pG~~VLDlGaGs-G~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~~~~~~~~~~~~vD~i~  148 (227)
T d1g8aa_          70 PIKPGKSVLYLGIAS-GTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDATKPEEYRALVPKVDVIF  148 (227)
T ss_dssp             CCCTTCEEEEETTTS-TTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTTCGGGGTTTCCCEEEEE
T ss_pred             ccCCCCEEEEeccCC-CHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECCCcccccccccceEEEE
Confidence            359999999999864 7888999998864  8999999999877764443   222222  2222332222235689888


Q ss_pred             ECCCCch----hHHHHHHhcccCCEEEEE
Q 019199          250 DTASGDH----PFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       250 d~~g~~~----~~~~~~~~l~~~G~iv~~  274 (344)
                      ..+..+.    .+.++.+.|+++|+++..
T Consensus       149 ~d~~~~~~~~~~l~~~~~~LkpgG~lvi~  177 (227)
T d1g8aa_         149 EDVAQPTQAKILIDNAEVYLKRGGYGMIA  177 (227)
T ss_dssp             ECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEccccchHHHHHHHHHHhcccCCeEEEE
Confidence            6555432    367778899999999875

>d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Protein-L-isoaspartyl O-methyltransferase
domain: Protein-L-isoaspartyl O-methyltransferase
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=97.27  E-value=0.00019  Score=58.61  Aligned_cols=96  Identities=14%  Similarity=0.168  Sum_probs=61.9

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHC---C----CeEEEEeCCchhHHHHHHhC--------CC-c-EEEeCCCHHHHH
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAF---G----LNVTVLSTSTSKKEEALSLL--------GA-D-KFVVSSDLEQMK  239 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~---g----~~V~~~~~~~~~~~~~~~~~--------g~-~-~~v~~~~~~~~~  239 (344)
                      .+++|++||.+|+|+ |+.++.+++..   |    .+|+.++..++-.+.+.+.+        +. . .++..+..+.+ 
T Consensus        77 ~l~~g~~VLeIGtGs-GY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~d~~~~~-  154 (223)
T d1r18a_          77 HLKPGARILDVGSGS-GYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEGDGRKGY-  154 (223)
T ss_dssp             TCCTTCEEEEESCTT-SHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEESCGGGCC-
T ss_pred             ccCCCCeEEEecCCC-CHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEeccccccc-
Confidence            469999999999853 66666666654   3    38999998887555543221        11 1 12222211111 


Q ss_pred             HhcCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          240 ALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       240 ~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ...+.||.++-+.+-+.....+++.|+++|+++..
T Consensus       155 ~~~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p  189 (223)
T d1r18a_         155 PPNAPYNAIHVGAAAPDTPTELINQLASGGRLIVP  189 (223)
T ss_dssp             GGGCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred             ccccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence            11257999988777666567889999999999863

>d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Thermus thermophilus [TaxId: 274]

Probab=97.26  E-value=0.00085  Score=55.79  Aligned_cols=75  Identities=24%  Similarity=0.289  Sum_probs=52.3

Q ss_pred             CCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCcEEE--eCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFV--VSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~~~v--~~~~~~~~~~~-------~~~  244 (344)
                      .|+++||+|+ |  ++|.+.++.+...|++|++.+++++..+.+   .+..+....+  |..+++.++++       .++
T Consensus         7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~   86 (256)
T d1ulua_           7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG   86 (256)
T ss_dssp             TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhcCC
Confidence            6889999997 5  799999999888999999988886644333   2333433333  44555444332       268


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.+.
T Consensus        87 iDilVnnag~   96 (256)
T d1ulua_          87 LDYLVHAIAF   96 (256)
T ss_dssp             EEEEEECCCC
T ss_pred             ceEEEecccc
Confidence            9999998874

>d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein R05D8.7
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.26  E-value=0.0004  Score=58.53  Aligned_cols=75  Identities=19%  Similarity=0.302  Sum_probs=55.8

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC------cEEEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA------DKFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~------~~~v~~~~~~~~~~~-------~  242 (344)
                      .|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.+++   +.      ....|-.+++.++++       -
T Consensus         4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~   83 (272)
T d1xkqa_           4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF   83 (272)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            5788999988 99999999999999999999999998876664443   21      123355565544332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++++.|.
T Consensus        84 g~iDilvnnAG~   95 (272)
T d1xkqa_          84 GKIDVLVNNAGA   95 (272)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeCCcc
Confidence            689999998774

>d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein Ta0852
species: Thermoplasma acidophilum [TaxId: 2303]

Probab=97.25  E-value=0.00014  Score=60.47  Aligned_cols=97  Identities=19%  Similarity=0.193  Sum_probs=66.7

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC---C-C-cEEEeCCCHHHHHHh-cCCccE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL---G-A-DKFVVSSDLEQMKAL-GKSLDF  247 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~---g-~-~~~v~~~~~~~~~~~-~~~~dv  247 (344)
                      ..++||++||=.|+|+ |..+..+|+..|.  +|+.++.+++..+.+.+.+   + . ...+...+..  +.. ...+|.
T Consensus        81 l~i~pG~rVLEiG~Gs-G~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~nv~~~~~Di~--~~~~~~~fD~  157 (250)
T d1yb2a1          81 CGLRPGMDILEVGVGS-GNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNVRTSRSDIA--DFISDQMYDA  157 (250)
T ss_dssp             CCCCTTCEEEEECCTT-SHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTEEEECSCTT--TCCCSCCEEE
T ss_pred             cCCCCcCEEEEeeeeC-cHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCceEEEEeeee--cccccceeee
Confidence            3459999999999864 7778888887654  8999999999887775432   2 2 2112222211  111 256898


Q ss_pred             EEECCC-CchhHHHHHHhcccCCEEEEEc
Q 019199          248 IIDTAS-GDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       248 vid~~g-~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |+--.. ....++.+.+.|+|+|+++.+.
T Consensus       158 V~ld~p~p~~~l~~~~~~LKpGG~lv~~~  186 (250)
T d1yb2a1         158 VIADIPDPWNHVQKIASMMKPGSVATFYL  186 (250)
T ss_dssp             EEECCSCGGGSHHHHHHTEEEEEEEEEEE
T ss_pred             eeecCCchHHHHHHHHHhcCCCceEEEEe
Confidence            874444 3455899999999999998864

>d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,6,8-tetrahydroxynaphthalene reductase
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.24  E-value=0.0019  Score=53.71  Aligned_cols=99  Identities=25%  Similarity=0.208  Sum_probs=68.5

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHhCCCcEE---EeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEA---LSLLGADKF---VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~---~~~~g~~~~---v~~~~~~~~~~~-------~~  243 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++..++.++ .+.+   .++.|.+..   .|..+++.+++.       .+
T Consensus         4 L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   83 (259)
T d1ja9a_           4 LAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFG   83 (259)
T ss_dssp             TTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHcC
Confidence            46899999987 999999999999999999887655443 3332   244565432   244555443332       26


Q ss_pred             CccEEEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.|..                         ...+.++..++.+|+++.+...
T Consensus        84 ~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~  142 (259)
T d1ja9a_          84 GLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSI  142 (259)
T ss_dssp             CEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             CCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccc
Confidence            799999988853                         2355666778888888887654

>d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical Protein YjhP
domain: Hypothetical Protein YjhP
species: Escherichia coli [TaxId: 562]

Probab=97.23  E-value=0.00053  Score=56.65  Aligned_cols=105  Identities=18%  Similarity=0.240  Sum_probs=70.3

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC-c-EEEeCCCHHHHHHhcC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA-D-KFVVSSDLEQMKALGK  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~-~-~~v~~~~~~~~~~~~~  243 (344)
                      +..+.....+++|++||=+|+|. |..+..+++..|++|+.++.+++..+.+++   ..|. + .-+...+...+ ...+
T Consensus        22 ~~~l~~~~~l~pg~~VLDiGCG~-G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~d~~~~-~~~~   99 (245)
T d1nkva_          22 YATLGRVLRMKPGTRILDLGSGS-GEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAAGY-VANE   99 (245)
T ss_dssp             HHHHHHHTCCCTTCEEEEETCTT-CHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCTTC-CCSS
T ss_pred             HHHHHHHcCCCCCCEEEEEcCCC-CHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhhHHhhc-cccC
Confidence            44566777789999999999864 566778888889999999999887655532   3452 1 11221121111 1236


Q ss_pred             CccEEEECCC------CchhHHHHHHhcccCCEEEEEc
Q 019199          244 SLDFIIDTAS------GDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       244 ~~dvvid~~g------~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .||+|+..-.      -...+..+.+.|+|+|+++...
T Consensus       100 ~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~  137 (245)
T d1nkva_         100 KCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE  137 (245)
T ss_dssp             CEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred             ceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence            7999875321      2345788889999999998753

>d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Peroxisomal trans 2-enoyl CoA reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.23  E-value=0.00047  Score=58.84  Aligned_cols=76  Identities=24%  Similarity=0.272  Sum_probs=56.4

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC--------CCcE---EEeCCCHHHHHHh-----
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL--------GADK---FVVSSDLEQMKAL-----  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~--------g~~~---~v~~~~~~~~~~~-----  241 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++++++.++++.+.+++        +...   ..|-.+++.+.++     
T Consensus        10 L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~   89 (297)
T d1yxma1          10 LQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTL   89 (297)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHH
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHHH
Confidence            57899999998 89999999999999999999999988876554433        2222   2344555544332     


Q ss_pred             --cCCccEEEECCCC
Q 019199          242 --GKSLDFIIDTASG  254 (344)
Q Consensus       242 --~~~~dvvid~~g~  254 (344)
                        .+++|+++++.|.
T Consensus        90 ~~~G~iDiLVnnAg~  104 (297)
T d1yxma1          90 DTFGKINFLVNNGGG  104 (297)
T ss_dssp             HHHSCCCEEEECCCC
T ss_pred             HHhCCeEEEEeeccc
Confidence              2689999998874

>d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.22  E-value=0.00099  Score=56.90  Aligned_cols=98  Identities=18%  Similarity=0.147  Sum_probs=65.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc---------hhHHHHHHh---CCCcEEEeCCCHHHHHH------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST---------SKKEEALSL---LGADKFVVSSDLEQMKA------  240 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~---------~~~~~~~~~---~g~~~~v~~~~~~~~~~------  240 (344)
                      .|+++||+|+ +++|.+.+..+...|++|++.+++.         +..+...++   .+.....+..+.+..++      
T Consensus         6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~   85 (302)
T d1gz6a_           6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL   85 (302)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence            5888999998 8999999999999999999986543         333333222   34445556555432222      


Q ss_pred             -hcCCccEEEECCCCc-------------------------hhHHHHHHhcc--cCCEEEEEcCC
Q 019199          241 -LGKSLDFIIDTASGD-------------------------HPFDAYMSLLK--VAGVYVLVGFP  277 (344)
Q Consensus       241 -~~~~~dvvid~~g~~-------------------------~~~~~~~~~l~--~~G~iv~~g~~  277 (344)
                       .-+++|+++++.|..                         ...+.++..|+  .+|+||.++..
T Consensus        86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~  150 (302)
T d1gz6a_          86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASA  150 (302)
T ss_dssp             HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCH
T ss_pred             HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCCh
Confidence             136899999998843                         12334445553  46899999765

>d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Putative shikimate dehydrogenase YdiB
species: Escherichia coli [TaxId: 562]

Probab=97.22  E-value=0.0013  Score=51.71  Aligned_cols=107  Identities=14%  Similarity=0.156  Sum_probs=69.1

Q ss_pred             HHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH---HHhC----CC-cEEEeCCCHHHHHH
Q 019199          170 TPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA---LSLL----GA-DKFVVSSDLEQMKA  240 (344)
Q Consensus       170 ~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~---~~~~----g~-~~~v~~~~~~~~~~  240 (344)
                      .+++..+.--.+.+|+|+|+|+.+.+++..+...|+ +++++.++.++.+.+   .+++    .. ....+..+...+.+
T Consensus         7 ~~l~~~~~~l~~k~vlIlGaGGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~   86 (182)
T d1vi2a1           7 RAIKESGFDIKGKTMVLLGAGGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAE   86 (182)
T ss_dssp             HHHHHTTCCCTTCEEEEECCSHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHH
T ss_pred             HHHHHcCCCcCCCEEEEECCcHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhh
Confidence            345555443567899999999999999999988998 888999987755433   1222    22 23445555555544


Q ss_pred             hcCCccEEEECCCCch------hHHHHHHhcccCCEEEEEcC
Q 019199          241 LGKSLDFIIDTASGDH------PFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       241 ~~~~~dvvid~~g~~~------~~~~~~~~l~~~G~iv~~g~  276 (344)
                      ....+|++|+++.-..      .+..-+..++++..++++-.
T Consensus        87 ~~~~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~Y  128 (182)
T d1vi2a1          87 ALASADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECVY  128 (182)
T ss_dssp             HHHTCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECCC
T ss_pred             hhcccceeccccCCccccccchhhhhHHHhhhcchhhHHhhc
Confidence            4567999999986321      01111345677777777643

>d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Siroheme synthase CysG, domain 1
species: Salmonella typhimurium [TaxId: 90371]

Probab=97.20  E-value=0.0024  Score=45.79  Aligned_cols=94  Identities=14%  Similarity=-0.008  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      -.|.+|||+|+|.+|..-++.+...|++|++++..... ...+. +-+....+...-.+   +.-.++++|+-+.+....
T Consensus        10 l~~k~vlVvG~G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~-~~~~i~~~~~~~~~---~dl~~~~lv~~at~d~~~   85 (113)
T d1pjqa1          10 LRDRDCLIVGGGDVAERKARLLLEAGARLTVNALTFIPQFTVWA-NEGMLTLVEGPFDE---TLLDSCWLAIAATDDDTV   85 (113)
T ss_dssp             CBTCEEEEECCSHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHH-TTTSCEEEESSCCG---GGGTTCSEEEECCSCHHH
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCeEEEEeccCChHHHHHH-hcCCceeeccCCCH---HHhCCCcEEeecCCCHHH
Confidence            35789999999999999999999999999998765543 32232 22322333321110   112569999999998874


Q ss_pred             HHHHHHhcccCCEEEEEcC
Q 019199          258 FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~  276 (344)
                      -....+..++.|.++.+..
T Consensus        86 n~~i~~~a~~~~ilVNv~D  104 (113)
T d1pjqa1          86 NQRVSDAAESRRIFCNVVD  104 (113)
T ss_dssp             HHHHHHHHHHTTCEEEETT
T ss_pred             HHHHHHHHHHcCCEEEeCC
Confidence            5677788888999988754

>d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.20  E-value=0.0023  Score=48.77  Aligned_cols=102  Identities=16%  Similarity=0.192  Sum_probs=77.1

Q ss_pred             hHHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCcc
Q 019199          168 VYTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       168 a~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~d  246 (344)
                      .+.++.+. ...-.|++|+|+|-|-+|...++.++.+|++|++++..+.+.-++ .--|....       .+.+.....|
T Consensus        10 ~~~~~~r~t~~~l~Gk~v~V~GyG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A-~~dG~~v~-------~~~~a~~~ad   81 (163)
T d1li4a1          10 LIDGIKRATDVMIAGKVAVVAGYGDVGKGCAQALRGFGARVIITEIDPINALQA-AMEGYEVT-------TMDEACQEGN   81 (163)
T ss_dssp             HHHHHHHHHCCCCTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEEC-------CHHHHTTTCS
T ss_pred             HHHHHHHHhCceecCCEEEEeccccccHHHHHHHHhCCCeeEeeecccchhHHh-hcCceEee-------ehhhhhhhcc
Confidence            35455443 445689999999999999999999999999999999988766555 23454321       1233446689


Q ss_pred             EEEECCCCch-hHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDTASGDH-PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g~~~-~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++-++|+.. .-.+-++.|+++..+..+|..
T Consensus        82 ivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghf  113 (163)
T d1li4a1          82 IFVTTTGCIDIILGRHFEQMKDDAIVCNIGHF  113 (163)
T ss_dssp             EEEECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred             EEEecCCCccchhHHHHHhccCCeEEEEeccc
Confidence            9999999754 356788999999988888755

>d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Pseudomonas syringae [TaxId: 317]

Probab=97.19  E-value=0.00039  Score=55.04  Aligned_cols=98  Identities=14%  Similarity=0.046  Sum_probs=64.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEE---------EeCCC--------HHHHHH
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKF---------VVSSD--------LEQMKA  240 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~---------v~~~~--------~~~~~~  240 (344)
                      +.+|.+||.+|+|. |..++.+|+ .|++|++++-+++.++.+++..+....         .....        .+....
T Consensus        18 ~~~~~rvLd~GCG~-G~~a~~la~-~G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~l~~~   95 (201)
T d1pjza_          18 VVPGARVLVPLCGK-SQDMSWLSG-QGYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFFALTAR   95 (201)
T ss_dssp             CCTTCEEEETTTCC-SHHHHHHHH-HCCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCSSSTHH
T ss_pred             CCCCCEEEEecCcC-CHHHHHHHH-cCCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceecccccccccc
Confidence            48999999999974 778888887 499999999999988888655442111         00000        000011


Q ss_pred             hcCCccEEEECCCC--------chhHHHHHHhcccCCEEEEEcCC
Q 019199          241 LGKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       241 ~~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ....+|++++....        ...+..+.+.|+|+|+++.....
T Consensus        96 ~~~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~~~  140 (201)
T d1pjza_          96 DIGHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLITLE  140 (201)
T ss_dssp             HHHSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEEES
T ss_pred             cccceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEEcc
Confidence            12458998875442        12367788899999998765433

>d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Biliverdin IX beta reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=0.00037  Score=55.98  Aligned_cols=96  Identities=17%  Similarity=0.113  Sum_probs=68.0

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhcCCccEEEECCCCch--
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALGKSLDFIIDTASGDH--  256 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~~~~dvvid~~g~~~--  256 (344)
                      .++|+|+|+ |.+|..++..+...|.+|++++++++++... ...+.+.+. |..+.+.+.+.-.+.|+||.++|...  
T Consensus         3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~-~~~~~~~~~gD~~d~~~l~~al~~~d~vi~~~g~~~~~   81 (205)
T d1hdoa_           3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSE-GPRPAHVVVGDVLQAADVDKTVAGQDAVIVLLGTRNDL   81 (205)
T ss_dssp             CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSS-SCCCSEEEESCTTSHHHHHHHHTTCSEEEECCCCTTCC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhcccc-cccccccccccccchhhHHHHhcCCCEEEEEeccCCch
Confidence            367999998 9999999998888999999999998876433 233443322 55666777666678999999987531  


Q ss_pred             --------hHHHHHHhcccC--CEEEEEcCC
Q 019199          257 --------PFDAYMSLLKVA--GVYVLVGFP  277 (344)
Q Consensus       257 --------~~~~~~~~l~~~--G~iv~~g~~  277 (344)
                              ....+++.++..  .+++.++..
T Consensus        82 ~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~  112 (205)
T d1hdoa_          82 SPTTVMSEGARNIVAAMKAHGVDKVVACTSA  112 (205)
T ss_dssp             SCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred             hhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence                    133455555554  478877543

>d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase)
species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]

Probab=97.19  E-value=0.0031  Score=52.73  Aligned_cols=99  Identities=20%  Similarity=0.187  Sum_probs=69.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh-HHHH---HHhCCCcEEE---eCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEA---LSLLGADKFV---VSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~---~~~~g~~~~v---~~~~~~~~~~~-------~~  243 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|++.+++.++ .+.+   .++.|.+...   |..+++.+.+.       .+
T Consensus        16 L~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g   95 (272)
T d1g0oa_          16 LEGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFG   95 (272)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhC
Confidence            35889999997 999999999999999999998877543 3322   2455644332   44555443332       26


Q ss_pred             CccEEEECCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFIIDTASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvid~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++|+++++.+..                         ...+.++..|...|+++.++..
T Consensus        96 ~idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~  154 (272)
T d1g0oa_          96 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSI  154 (272)
T ss_dssp             CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCG
T ss_pred             CCCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccc
Confidence            899999988753                         2345666678889999988654

>d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 7-alpha-hydroxysteroid dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=97.18  E-value=0.00039  Score=58.01  Aligned_cols=76  Identities=20%  Similarity=0.276  Sum_probs=56.2

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      -.|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+   +.|...   ..|-.+++.+.++       -++
T Consensus         9 L~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~g~   88 (255)
T d1fmca_           9 LDGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGK   88 (255)
T ss_dssp             CTTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred             CCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence            36889999987 899999999999999999999999887765533   345332   2344555444332       268


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        89 iDilvnnAG~   98 (255)
T d1fmca_          89 VDILVNNAGG   98 (255)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeeeCCcC
Confidence            9999999874

>d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Mannitol dehydrogenase
species: Mushroom (Agaricus bisporus) [TaxId: 5341]

Probab=97.17  E-value=0.00035  Score=58.44  Aligned_cols=75  Identities=21%  Similarity=0.174  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH----HhCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL----SLLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~----~~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++++++++++..+.    ++.|...   ..|-.+++.+.++       -++
T Consensus         8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~   87 (260)
T d1h5qa_           8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP   87 (260)
T ss_dssp             TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5788999998 89999999999999999999999988765443    3345432   3355565544332       368


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        88 iDilVnnAg~   97 (260)
T d1h5qa_          88 ISGLIANAGV   97 (260)
T ss_dssp             EEEEEECCCC
T ss_pred             CcEecccccc
Confidence            9999998874

>d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.17  E-value=9.6e-05  Score=61.08  Aligned_cols=92  Identities=25%  Similarity=0.224  Sum_probs=60.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe--CCCHHHHH-------H-h-cCCccE
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV--SSDLEQMK-------A-L-GKSLDF  247 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~--~~~~~~~~-------~-~-~~~~dv  247 (344)
                      +|++|||+|+ +++|.+.++.+...|++|+.++.++++...      ....+.  ....+..+       + . .+++|+
T Consensus         1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~   74 (236)
T d1dhra_           1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS------ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA   74 (236)
T ss_dssp             CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS------EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence            4789999998 999999999999999999999877653211      111111  11111111       1 1 246999


Q ss_pred             EEECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++++.|..                          ...+.++..++++|+|+.++..
T Consensus        75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~  130 (236)
T d1dhra_          75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAK  130 (236)
T ss_dssp             EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccH
Confidence            99988731                          1233455567889999999765

>d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Streptomyces coelicolor [TaxId: 1902]

Probab=97.15  E-value=0.00067  Score=56.54  Aligned_cols=74  Identities=19%  Similarity=0.211  Sum_probs=54.8

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcE---EEeCCCHHHHHHh-------cCCcc
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADK---FVVSSDLEQMKAL-------GKSLD  246 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~---~v~~~~~~~~~~~-------~~~~d  246 (344)
                      |+.+||+|+ +++|.+.+..+...|++|+++++++++++.+.+   +.|...   ..|-.+++.++++       -+++|
T Consensus         2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iD   81 (257)
T d2rhca1           2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERYGPVD   81 (257)
T ss_dssp             CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCSCS
T ss_pred             CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence            567799998 899999999999999999999999887765543   345332   2355555544332       26899


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        82 ilVnnAG~   89 (257)
T d2rhca1          82 VLVNNAGR   89 (257)
T ss_dssp             EEEECCCC
T ss_pred             EEEecccc
Confidence            99999885

>d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase (5l265)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.15  E-value=0.00051  Score=57.57  Aligned_cols=75  Identities=17%  Similarity=0.225  Sum_probs=55.2

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CC---c---EEEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GA---D---KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~---~---~~v~~~~~~~~~~~-------~  242 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.+++   |.   .   ...|-.+.+.++++       -
T Consensus         4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~   83 (264)
T d1spxa_           4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF   83 (264)
T ss_dssp             TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence            6788899987 99999999999999999999999998876664432   21   1   12355565544432       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++++.|.
T Consensus        84 g~iDilvnnAG~   95 (264)
T d1spxa_          84 GKLDILVNNAGA   95 (264)
T ss_dssp             SCCCEEEECCC-
T ss_pred             CCCCEeeccccc
Confidence            689999999873

>d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Ktn bsu222
species: Bacillus subtilis [TaxId: 1423]

Probab=97.15  E-value=0.00046  Score=51.30  Aligned_cols=92  Identities=15%  Similarity=0.222  Sum_probs=66.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCchhHH-
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDHPFD-  259 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~~~~-  259 (344)
                      +++|+|.|.+|..+++.+...|.+|++++.++++.+.+ +..|...++ |..+++.+.+.+ ..+|.++-+++....-. 
T Consensus         2 ~~iIiG~G~~G~~la~~L~~~g~~vvvid~d~~~~~~~-~~~~~~~~~gd~~~~~~l~~a~i~~a~~vi~~~~~~~~~~~   80 (134)
T d2hmva1           2 QFAVIGLGRFGGSIVKELHRMGHEVLAVDINEEKVNAY-ASYATHAVIANATEENELLSLGIRNFEYVIVAIGANIQAST   80 (134)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEESCHHHHHHT-TTTCSEEEECCTTCTTHHHHHTGGGCSEEEECCCSCHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCeEEEecCcHHHHHHH-HHhCCcceeeecccchhhhccCCccccEEEEEcCchHHhHH
Confidence            47788999999999999999999999999999999888 566654433 345566666654 67899988887653222 


Q ss_pred             --HHHHhcccCCEEEEEc
Q 019199          260 --AYMSLLKVAGVYVLVG  275 (344)
Q Consensus       260 --~~~~~l~~~G~iv~~g  275 (344)
                        .......+..+++...
T Consensus        81 ~~~~~~~~~~~~~iiar~   98 (134)
T d2hmva1          81 LTTLLLKELDIPNIWVKA   98 (134)
T ss_dssp             HHHHHHHHTTCSEEEEEC
T ss_pred             HHHHHHHHcCCCcEEeec
Confidence              2233344555666553

>d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase
species: Arthrobacter, strain 1c [TaxId: 1663]

Probab=97.12  E-value=0.0011  Score=51.79  Aligned_cols=83  Identities=20%  Similarity=0.194  Sum_probs=58.3

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-------eCCC--HHHHHHhcCCccEEEECC
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-------VSSD--LEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-------~~~~--~~~~~~~~~~~dvvid~~  252 (344)
                      .++.|+|+|.+|++.+..+...|.+|++.++++++.+.+. +.+.....       ....  .....+..+++|++|-++
T Consensus         2 k~iaIiGaG~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~~aD~iii~v   80 (184)
T d1bg6a2           2 KTYAVLGLGNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVKDADVILIVV   80 (184)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHTTCSEEEECS
T ss_pred             CEEEEECccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhcCCCEEEEEE
Confidence            6799999999999999999999999999999999888774 44421111       0000  012233346799999999


Q ss_pred             CCchhHHHHHHhcc
Q 019199          253 SGDHPFDAYMSLLK  266 (344)
Q Consensus       253 g~~~~~~~~~~~l~  266 (344)
                      .... ....++.++
T Consensus        81 ~~~~-~~~~~~~i~   93 (184)
T d1bg6a2          81 PAIH-HASIAANIA   93 (184)
T ss_dssp             CGGG-HHHHHHHHG
T ss_pred             chhH-HHHHHHHhh
Confidence            8765 555555444

>d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein F25D1.5
species: Caenorhabditis elegans [TaxId: 6239]

Probab=97.12  E-value=0.00053  Score=57.79  Aligned_cols=75  Identities=20%  Similarity=0.293  Sum_probs=55.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--c----EEEeCCCHHHHHHh-------c
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--D----KFVVSSDLEQMKAL-------G  242 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~----~~v~~~~~~~~~~~-------~  242 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++   .|.  .    ...|-.+++.++++       -
T Consensus         3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~   82 (274)
T d1xhla_           3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF   82 (274)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence            5889999998 8999999999999999999999998887665443   231  1    22355565544332       2


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++++.|.
T Consensus        83 G~iDilVnnAG~   94 (274)
T d1xhla_          83 GKIDILVNNAGA   94 (274)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCceEEEeeccc
Confidence            689999998773

>d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR)
species: Human (Homo sapiens), [TaxId: 9606]

Probab=97.09  E-value=0.0008  Score=57.19  Aligned_cols=76  Identities=17%  Similarity=0.204  Sum_probs=55.8

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCCcE-E--EeCCCHHHHHHh-------cC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGADK-F--VVSSDLEQMKAL-------GK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~~~-~--v~~~~~~~~~~~-------~~  243 (344)
                      -.|+++||+|+ +++|.+.+..+...|++|+++++++++++.+.++    .|... .  .|..+.+.+.+.       .+
T Consensus        23 l~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g  102 (294)
T d1w6ua_          23 FQGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAG  102 (294)
T ss_dssp             TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTC
T ss_pred             CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhcc
Confidence            35799999997 9999999999999999999999998876554333    34332 2  344555443322       37


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus       103 ~iDilvnnAg~  113 (294)
T d1w6ua_         103 HPNIVINNAAG  113 (294)
T ss_dssp             SCSEEEECCCC
T ss_pred             ccchhhhhhhh
Confidence            89999999884

>d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Nematode (Caenorhabditis elegans) [TaxId: 6239]

Probab=97.06  E-value=0.00013  Score=60.16  Aligned_cols=91  Identities=25%  Similarity=0.276  Sum_probs=59.6

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCC--CHHH-------HHH-h-cCCccEE
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSS--DLEQ-------MKA-L-GKSLDFI  248 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~--~~~~-------~~~-~-~~~~dvv  248 (344)
                      +.+|||+|+ +++|.+.++.+...|++|+.+++++++...      ....+...  ..+.       ... . .+++|++
T Consensus         2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l   75 (235)
T d1ooea_           2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV   75 (235)
T ss_dssp             CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred             CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence            346899998 999999999999999999999988764211      11111111  1111       111 1 2679999


Q ss_pred             EECCCCc--------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTASGD--------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g~~--------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +++.|..                          ...+.++..++++|+++.++..
T Consensus        76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~  130 (235)
T d1ooea_          76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAA  130 (235)
T ss_dssp             EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCG
T ss_pred             EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccH
Confidence            9988741                          1233455567889999999765

>d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Bacterial sepiapterin reductase
species: Chlorobium tepidum [TaxId: 1097]

Probab=97.05  E-value=0.0021  Score=52.88  Aligned_cols=95  Identities=17%  Similarity=0.150  Sum_probs=64.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCe-------EEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLN-------VTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------  241 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~-------V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------  241 (344)
                      .|||+|+ +++|.+.+..+...|++       |+..++++++++.+.++   .|...   ..|-.+++.++++       
T Consensus         3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~   82 (240)
T d2bd0a1           3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER   82 (240)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred             EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence            3678898 89999998888888887       88899998877665443   34322   2355665544332       


Q ss_pred             cCCccEEEECCCCc-------------------------hhHHHHHHhcc--cCCEEEEEcCC
Q 019199          242 GKSLDFIIDTASGD-------------------------HPFDAYMSLLK--VAGVYVLVGFP  277 (344)
Q Consensus       242 ~~~~dvvid~~g~~-------------------------~~~~~~~~~l~--~~G~iv~~g~~  277 (344)
                      -+++|+++++.|..                         ...+.++..|+  .+|+++.++..
T Consensus        83 ~g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~  145 (240)
T d2bd0a1          83 YGHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSV  145 (240)
T ss_dssp             TSCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCG
T ss_pred             cCCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEech
Confidence            36899999998843                         12334444553  46999999765

>d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Probable methyltransferase Rv2118c
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=97.02  E-value=0.0016  Score=54.22  Aligned_cols=121  Identities=20%  Similarity=0.190  Sum_probs=78.9

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC----C---CcEEEeCCCHHHHHHhc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL----G---ADKFVVSSDLEQMKALG  242 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~----g---~~~~v~~~~~~~~~~~~  242 (344)
                      +.....++||++||=.|+|+ |..+..+|+..|.  +|+.++.+++..+.+++.+    +   ....+...+.....-..
T Consensus        88 Ii~~l~i~PG~~VLE~G~Gs-G~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~d~~~~~~~~  166 (264)
T d1i9ga_          88 IVHEGDIFPGARVLEAGAGS-GALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVSDLADSELPD  166 (264)
T ss_dssp             HHHHTTCCTTCEEEEECCTT-SHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECSCGGGCCCCT
T ss_pred             HHHHhCCCCCCEEEecCcCC-cHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEecccccccccC
Confidence            33445559999999999864 8888999998875  8999999999887775422    1   12222222221110012


Q ss_pred             CCccEEEECCCC-chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHH-hCCC
Q 019199          243 KSLDFIIDTASG-DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCA-AHKI  307 (344)
Q Consensus       243 ~~~dvvid~~g~-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~g~~  307 (344)
                      ..+|.||--... ...+..+.+.|+|+|+++.+-.              ..++++++++.+. ++.+
T Consensus       167 ~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P--------------~i~Qv~~~~~~l~~~~~f  219 (264)
T d1i9ga_         167 GSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA--------------TVTQLSRIVEALRAKQCW  219 (264)
T ss_dssp             TCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES--------------SHHHHHHHHHHHHHHSSB
T ss_pred             CCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC--------------ccChHHHHHHHHHHcCCe
Confidence            568987644444 4568999999999999988732              2334556666664 4444

>d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=96.99  E-value=0.0025  Score=52.05  Aligned_cols=72  Identities=19%  Similarity=0.209  Sum_probs=52.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCC-HHHHHHhcCCccEEEECCCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSD-LEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~-~~~~~~~~~~~dvvid~~g~~  255 (344)
                      +|+++||+|+ +++|.+.++.+...|++|++++++++.++    +.+...+. |-.+ .+.+.+.-+++|+++++.|..
T Consensus         3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l~----~~~~~~~~~Dv~~~~~~~~~~~g~iD~lVnnAG~~   77 (234)
T d1o5ia_           3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELLK----RSGHRYVVCDLRKDLDLLFEKVKEVDILVLNAGGP   77 (234)
T ss_dssp             TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHH----HTCSEEEECCTTTCHHHHHHHSCCCSEEEECCCCC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHH----hcCCcEEEcchHHHHHHHHHHhCCCcEEEeccccc
Confidence            5789999998 89999999999999999999999876553    44543322 2222 233333347799999988743

>d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Haemophilus influenzae [TaxId: 727]

Probab=96.94  E-value=0.0011  Score=51.49  Aligned_cols=100  Identities=15%  Similarity=0.179  Sum_probs=63.9

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC--c-EEEeCCCHHHHHHhcCCccE
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA--D-KFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~--~-~~v~~~~~~~~~~~~~~~dv  247 (344)
                      ++...+...++.+|+|+|+|+.+.+++..+...+.+|+++.|+.++.+.+.+.++.  . ..+....     .....+|+
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~-----~~~~~~di   82 (171)
T d1p77a1           8 DLQRLNWLRPNQHVLILGAGGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS-----IPLQTYDL   82 (171)
T ss_dssp             HHHHTTCCCTTCEEEEECCSHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG-----CCCSCCSE
T ss_pred             HHHHcCCCCCCCEEEEECCcHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc-----ccccccce
Confidence            45544444688999999999999998888877667999999999988777666652  1 1221111     11256999


Q ss_pred             EEECCCCchh---HHHHHHhcccCCEEEEEc
Q 019199          248 IIDTASGDHP---FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       248 vid~~g~~~~---~~~~~~~l~~~G~iv~~g  275 (344)
                      +++|++....   .......++++..++++-
T Consensus        83 iIN~tp~g~~~~~~~~~~~~~~~~~~~~D~v  113 (171)
T d1p77a1          83 VINATSAGLSGGTASVDAEILKLGSAFYDMQ  113 (171)
T ss_dssp             EEECCCC-------CCCHHHHHHCSCEEESC
T ss_pred             eeecccccccccccchhhhhhcccceeeeee
Confidence            9999875320   111123345556565554

>d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: S-adenosylhomocystein hydrolase
species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]

Probab=96.93  E-value=0.0052  Score=46.56  Aligned_cols=101  Identities=19%  Similarity=0.177  Sum_probs=76.8

Q ss_pred             HHHHHhc-cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccE
Q 019199          169 YTPMMRH-KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       169 ~~~l~~~-~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      +.++.+. ..+-.|.+++|.|-|-+|.-.++.+|.+|++|+++..++-+.-++ .--|.. +.      .+.+..+..|+
T Consensus        10 ~d~i~r~t~~~laGk~vvV~GYG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA-~mdGf~-v~------~~~~a~~~aDi   81 (163)
T d1v8ba1          10 PDGLMRATDFLISGKIVVICGYGDVGKGCASSMKGLGARVYITEIDPICAIQA-VMEGFN-VV------TLDEIVDKGDF   81 (163)
T ss_dssp             HHHHHHHHCCCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEECSCHHHHHHH-HTTTCE-EC------CHHHHTTTCSE
T ss_pred             HHHHHHHhCceecCCEEEEecccccchhHHHHHHhCCCEEEEEecCchhhHHH-HhcCCc-cC------chhHccccCcE
Confidence            4444444 445789999999999999999999999999999999988765444 122432 21      23344567999


Q ss_pred             EEECCCCchh-HHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHP-FDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~-~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++-++|+... -..-++.|+++..+...|-.
T Consensus        82 ~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHf  112 (163)
T d1v8ba1          82 FITCTGNVDVIKLEHLLKMKNNAVVGNIGHF  112 (163)
T ss_dssp             EEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred             EEEcCCCCccccHHHHHHhhCCeEEEecccc
Confidence            9999998653 56778999999999999865

>d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein YcgJ
species: Bacillus subtilis [TaxId: 1423]

Probab=96.92  E-value=0.00068  Score=55.50  Aligned_cols=103  Identities=20%  Similarity=0.234  Sum_probs=67.0

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc-EEEeCCCHHHHHHhcCCcc
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~~v~~~~~~~~~~~~~~~d  246 (344)
                      .+.+...+++|++||-+|+|. |..+..+++. +.+|+.++-+++.++.+++.   .|.+ ..+...+...+.-..+.||
T Consensus         7 ~l~~~~~~~~~~rILDiGcGt-G~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~~~~~~d~~~~~~~~~~fD   84 (234)
T d1xxla_           7 LMIKTAECRAEHRVLDIGAGA-GHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENVRFQQGTAESLPFPDDSFD   84 (234)
T ss_dssp             HHHHHHTCCTTCEEEEESCTT-SHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSEEEEECBTTBCCSCTTCEE
T ss_pred             HHHHHhCCCCCCEEEEeCCcC-cHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccccccccccccccccccccc
Confidence            355666779999999999864 7777777774 68999999998876665333   2321 1111111111110125699


Q ss_pred             EEEECCCC------chhHHHHHHhcccCCEEEEEc
Q 019199          247 FIIDTASG------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       247 vvid~~g~------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +|+..-.-      ...++.+.+.|+|+|+++...
T Consensus        85 ~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~  119 (234)
T d1xxla_          85 IITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD  119 (234)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             eeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence            98864332      234788889999999998764

>d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: meso-2,3-butanediol dehydrogenase
species: Klebsiella pneumoniae [TaxId: 573]

Probab=96.91  E-value=0.0014  Score=54.46  Aligned_cols=72  Identities=22%  Similarity=0.170  Sum_probs=52.8

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcE---EEeCCCHHHHHHh-------cCCccEE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADK---FVVSSDLEQMKAL-------GKSLDFI  248 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~---~v~~~~~~~~~~~-------~~~~dvv  248 (344)
                      .+||+|+ +++|.+.+..+...|++|+++++++++++.+.++   .|.+.   ..|-.+++.+.++       -+++|++
T Consensus         3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil   82 (255)
T d1gega_           3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTLGGFDVI   82 (255)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHTTCCCEE
T ss_pred             EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence            4688888 8999999988888999999999999887655433   45332   2355565544432       2689999


Q ss_pred             EECCCC
Q 019199          249 IDTASG  254 (344)
Q Consensus       249 id~~g~  254 (344)
                      +++.|.
T Consensus        83 VnnAG~   88 (255)
T d1gega_          83 VNNAGV   88 (255)
T ss_dssp             EECCCC
T ss_pred             Eecccc
Confidence            998874

>d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA2
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.89  E-value=0.0018  Score=54.82  Aligned_cols=103  Identities=20%  Similarity=0.205  Sum_probs=68.0

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCCc--EEEeCCCHHHHHHhcC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGAD--KFVVSSDLEQMKALGK  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~--~~v~~~~~~~~~~~~~  243 (344)
                      +.-+.+...+++|++||-+|+|- |-.+..+|+..|++|+.++.+++..+.+.   +..|..  ..+...+..   ...+
T Consensus        50 ~~~~~~~l~l~~G~~VLDiGCG~-G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~d~~---~~~~  125 (291)
T d1kpia_          50 RKLALDKLNLEPGMTLLDIGCGW-GSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQGWE---EFDE  125 (291)
T ss_dssp             HHHHHHTTCCCTTCEEEEETCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEECCGG---GCCC
T ss_pred             HHHHHHhcCCCCCCEEEEecCcc-hHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhhccc---cccc
Confidence            44455555679999999999863 55678888889999999999988654442   234522  122222221   2236


Q ss_pred             CccEEEE-----CCCC----------chhHHHHHHhcccCCEEEEEc
Q 019199          244 SLDFIID-----TASG----------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       244 ~~dvvid-----~~g~----------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .||.|+.     .++.          ...++.+.+.|+|+|+++.-.
T Consensus       126 ~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~  172 (291)
T d1kpia_         126 PVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT  172 (291)
T ss_dssp             CCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred             ccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence            7998865     3332          134778889999999998643

>d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Halohydrin dehalogenase HheC
species: Agrobacterium tumefaciens [TaxId: 358]

Probab=96.88  E-value=0.0026  Score=52.62  Aligned_cols=71  Identities=14%  Similarity=0.033  Sum_probs=49.5

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEEEeCCCHHH-HHHh---cCCccEEEECCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKFVVSSDLEQ-MKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~v~~~~~~~-~~~~---~~~~dvvid~~g  253 (344)
                      ++||+|+ +++|++.+..+...|++|++.+++.++++++..   .+....+.+..+.+. .++.   -+++|+++++.|
T Consensus         2 TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~~~~~~G~iDiLVnNAg   80 (252)
T d1zmta1           2 TAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAYGQVDVLVSNDI   80 (252)
T ss_dssp             EEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHHSCCCEEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHhhhCcEEEeccCCHHHHHHHHHHHHHHcCCCCEEEECCc
Confidence            6899998 899999999888899999999988887665522   233333344444332 2222   268999998765

>d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: CmaA1
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.88  E-value=0.00096  Score=56.42  Aligned_cols=102  Identities=22%  Similarity=0.259  Sum_probs=68.5

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC-c-EEEeCCCHHHHHHhcC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA-D-KFVVSSDLEQMKALGK  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~-~~v~~~~~~~~~~~~~  243 (344)
                      ...+.+...+++|++||-+|+| .|..++.+|+..|++|++++.+++..+.+.+.   .|. + ..+...+.   ....+
T Consensus        51 ~~~~~~~l~l~~G~~VLDiGCG-~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~d~---~~~~~  126 (285)
T d1kpga_          51 IDLALGKLGLQPGMTLLDVGCG-WGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLAGW---EQFDE  126 (285)
T ss_dssp             HHHHHTTTTCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEESCG---GGCCC
T ss_pred             HHHHHHHcCCCCCCEEEEecCc-chHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHhhh---hcccc
Confidence            3445555567999999999986 46778889999999999999998877665332   331 1 11222221   12235


Q ss_pred             CccEEEE-----CCCCc---hhHHHHHHhcccCCEEEEE
Q 019199          244 SLDFIID-----TASGD---HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       244 ~~dvvid-----~~g~~---~~~~~~~~~l~~~G~iv~~  274 (344)
                      .+|.++.     .++..   ..++.+.+.|+|+|+++.-
T Consensus       127 ~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~  165 (285)
T d1kpga_         127 PVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLH  165 (285)
T ss_dssp             CCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEE
T ss_pred             cccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEE
Confidence            6887754     44432   3467788899999999854

>d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Glucose dehydrogenase
species: Bacillus megaterium [TaxId: 1404]

Probab=96.88  E-value=0.0026  Score=53.00  Aligned_cols=75  Identities=20%  Similarity=0.139  Sum_probs=53.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHH---HHhCCCcE---EEeCCCHHHHHHh-------cCC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEA---LSLLGADK---FVVSSDLEQMKAL-------GKS  244 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~---~~~~g~~~---~v~~~~~~~~~~~-------~~~  244 (344)
                      .|+++||+|+ +++|.+.++.+...|++|++++++.+ +.+.+   .++.|.+.   ..|-.+++.++++       .++
T Consensus         6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~   85 (261)
T d1geea_           6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK   85 (261)
T ss_dssp             TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred             CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence            5788999987 89999999999899999999998865 33322   23455432   2355555544332       268


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|+++++.|.
T Consensus        86 iDiLVnnAG~   95 (261)
T d1geea_          86 LDVMINNAGL   95 (261)
T ss_dssp             CCEEEECCCC
T ss_pred             CCEeecccee
Confidence            9999999875

>d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein TM0748
species: Thermotoga maritima [TaxId: 2336]

Probab=96.86  E-value=0.0015  Score=54.56  Aligned_cols=117  Identities=20%  Similarity=0.164  Sum_probs=80.2

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHHHHHh-cCCc
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQMKAL-GKSL  245 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~~~~~-~~~~  245 (344)
                      ....+++|++||=.|+|+ |..++.+|+..+  .+|+.++.+++..+.+++.   +|.  ...+...+..  ... ...+
T Consensus        97 ~~l~i~pG~~VLDiG~Gs-G~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~d~~--~~~~~~~~  173 (266)
T d1o54a_          97 MMLDVKEGDRIIDTGVGS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVRDIS--EGFDEKDV  173 (266)
T ss_dssp             HHTTCCTTCEEEEECCTT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECCCGG--GCCSCCSE
T ss_pred             HhhCCCCCCEEEECCCCC-CHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEecccc--ccccccce
Confidence            344459999999999875 778888999875  5999999999987776433   442  2222233211  111 2468


Q ss_pred             cEEEECCCC-chhHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCC
Q 019199          246 DFIIDTASG-DHPFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKI  307 (344)
Q Consensus       246 dvvid~~g~-~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  307 (344)
                      |.|+--... ...++.+.+.|+|+|+++.+..              ..+++++.++.+.+..|
T Consensus       174 D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P--------------~~~Qv~~~~~~l~~~gF  222 (266)
T d1o54a_         174 DALFLDVPDPWNYIDKCWEALKGGGRFATVCP--------------TTNQVQETLKKLQELPF  222 (266)
T ss_dssp             EEEEECCSCGGGTHHHHHHHEEEEEEEEEEES--------------SHHHHHHHHHHHHHSSE
T ss_pred             eeeEecCCCHHHHHHHHHhhcCCCCEEEEEeC--------------cccHHHHHHHHHHHCCc
Confidence            887765555 4568999999999999987632              23456677777776655

>d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Methoxy mycolic acid synthase 4, Mma4
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.84  E-value=0.0064  Score=51.00  Aligned_cols=102  Identities=18%  Similarity=0.248  Sum_probs=67.7

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHHHHHhcC
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQMKALGK  243 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~~~~~~~  243 (344)
                      +..+.+...+++|++||-+|+|. |..+..+++..|++|+.++.+++..+.+.+.   .|.  ...+...+..   ...+
T Consensus        41 ~~~~~~~l~l~~g~~VLDiGCG~-G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~d~~---~~~~  116 (280)
T d2fk8a1          41 VDLNLDKLDLKPGMTLLDIGCGW-GTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQGWE---DFAE  116 (280)
T ss_dssp             HHHHHTTSCCCTTCEEEEESCTT-SHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEESCGG---GCCC
T ss_pred             HHHHHHHcCCCCCCEEEEecCCc-hHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhhhhh---hhcc
Confidence            44455555679999999999863 4456778888899999999999877666433   342  1111112211   2346


Q ss_pred             CccEEEE-----CCCCc---hhHHHHHHhcccCCEEEEE
Q 019199          244 SLDFIID-----TASGD---HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       244 ~~dvvid-----~~g~~---~~~~~~~~~l~~~G~iv~~  274 (344)
                      .+|.++.     .++..   ..++.+.+.|+|+|+++.-
T Consensus       117 ~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~  155 (280)
T d2fk8a1         117 PVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ  155 (280)
T ss_dssp             CCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred             chhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence            7888854     33322   2377788999999999864

>d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Mycolic acid cyclopropane synthase
domain: Putative sarcosine dimethylglycine methyltransferase
species: Red algae (Galdieria sulphuraria) [TaxId: 130081]

Probab=96.81  E-value=0.0021  Score=54.05  Aligned_cols=105  Identities=18%  Similarity=0.208  Sum_probs=68.5

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC--cEEEeCCCHHHHHHhcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA--DKFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~--~~~v~~~~~~~~~~~~~~~d  246 (344)
                      +.....+.+|++||=+|+| .|..+..+++..|++|++++.++...+.+.+.   .|.  ..-+...+...+.-..+.||
T Consensus        59 l~~~~~l~~~~~vLDiGcG-~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~d~~~l~~~~~sfD  137 (282)
T d2o57a1          59 LAMTGVLQRQAKGLDLGAG-YGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFLEIPCEDNSYD  137 (282)
T ss_dssp             HHHTTCCCTTCEEEEETCT-TSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTTSCSSCTTCEE
T ss_pred             HHHhcCCCCCCEEEEeCCC-CcHHHhhhhccCCcEEEEEeccchhhhhhhcccccccccccccccccccccccccccccc
Confidence            4455667999999999987 36677888888899999999998876555332   232  12122222111111125699


Q ss_pred             EEEECCC-----C-chhHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDTAS-----G-DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+-.-.     . ...+..+.+.|+|+|+++.....
T Consensus       138 ~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~  174 (282)
T d2o57a1         138 FIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM  174 (282)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred             hhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEee
Confidence            9975322     1 23478888999999999877543

>d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Thiopurine S-methyltransferase
domain: Thiopurine S-methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.81  E-value=0.0024  Score=51.99  Aligned_cols=99  Identities=17%  Similarity=0.057  Sum_probs=66.3

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEe------------C---------CCH
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVV------------S---------SDL  235 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~------------~---------~~~  235 (344)
                      .+.++.+||..|+|. |..+..+|+ .|++|++++-+++-.+.+.++.+......            .         .+.
T Consensus        42 ~~~~~~rvLd~GCG~-G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~d~  119 (229)
T d2bzga1          42 KGKSGLRVFFPLCGK-AVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYCCSI  119 (229)
T ss_dssp             TTCCSCEEEETTCTT-CTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEESCG
T ss_pred             CCCCCCEEEEeCCCC-cHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEEcch
Confidence            347889999999974 777778876 69999999999998888866655321110            0         000


Q ss_pred             -HHHHHhcCCccEEEECCCC--------chhHHHHHHhcccCCEEEEEcCC
Q 019199          236 -EQMKALGKSLDFIIDTASG--------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       236 -~~~~~~~~~~dvvid~~g~--------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       +........+|+++++..-        ...+..+.+.|+|+|+++.....
T Consensus       120 ~~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~~  170 (229)
T d2bzga1         120 FDLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVLS  170 (229)
T ss_dssp             GGGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEEE
T ss_pred             hhccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEcc
Confidence             1101112568999986542        12357888999999998776544

>d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=96.80  E-value=0.003  Score=51.95  Aligned_cols=95  Identities=19%  Similarity=0.136  Sum_probs=62.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeC-CchhHHHHH---HhCCCcE---EEeCCCHHHHHHh-------cCCccE
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLST-STSKKEEAL---SLLGADK---FVVSSDLEQMKAL-------GKSLDF  247 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~-~~~~~~~~~---~~~g~~~---~v~~~~~~~~~~~-------~~~~dv  247 (344)
                      .+||+|+ +++|++.++.+...|++|++.+. ++++++.+.   +..|...   ..|-.+++.++++       -+++|+
T Consensus         3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDi   82 (244)
T d1edoa_           3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTIDV   82 (244)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCCSE
T ss_pred             EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCCCc
Confidence            4677887 99999999999999999988755 444444332   3345332   2355555444332       368999


Q ss_pred             EEECCCCc-------------------------hhHHHHHHhc--ccCCEEEEEcCC
Q 019199          248 IIDTASGD-------------------------HPFDAYMSLL--KVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~  277 (344)
                      ++++.|..                         ...+.++..|  +.+|+||.++..
T Consensus        83 LVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~  139 (244)
T d1edoa_          83 VVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASV  139 (244)
T ss_dssp             EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCT
T ss_pred             cccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence            99988743                         1233445555  457999999865

>d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Synechocystis sp. pcc 6803 [TaxId: 1148]

Probab=96.73  E-value=0.0036  Score=47.99  Aligned_cols=86  Identities=19%  Similarity=0.144  Sum_probs=60.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC-CcEEEeCCCHHHHHHhcCCccEEEECCCCch---hH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG-ADKFVVSSDLEQMKALGKSLDFIIDTASGDH---PF  258 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g-~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---~~  258 (344)
                      +|.|+|+|.+|.+.+..++..|.+|++.++++++.+.+ ++.| .+...+..      +.....|++|-++....   .+
T Consensus         2 kI~iIG~G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a-~~~~~~~~~~~~~------~~~~~~DiIilavp~~~~~~vl   74 (165)
T d2f1ka2           2 KIGVVGLGLIGASLAGDLRRRGHYLIGVSRQQSTCEKA-VERQLVDEAGQDL------SLLQTAKIIFLCTPIQLILPTL   74 (165)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTSCSEEESCG------GGGTTCSEEEECSCHHHHHHHH
T ss_pred             EEEEEeecHHHHHHHHHHHHCCCEEEEEECCchHHHHH-HHhhccceeeeec------ccccccccccccCcHhhhhhhh
Confidence            47889999999998888889999999999999888887 5666 34433221      12356899998886443   23


Q ss_pred             HHHHHhcccCCEEEEEc
Q 019199          259 DAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g  275 (344)
                      +++...+.++..++.++
T Consensus        75 ~~l~~~l~~~~iv~~~~   91 (165)
T d2f1ka2          75 EKLIPHLSPTAIVTDVA   91 (165)
T ss_dssp             HHHGGGSCTTCEEEECC
T ss_pred             hhhhhhcccccceeecc
Confidence            33334445566666564

>d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Precorrin-6Y methyltransferase (CbiT)
domain: Precorrin-6Y methyltransferase (CbiT)
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=96.71  E-value=0.0077  Score=47.09  Aligned_cols=96  Identities=13%  Similarity=0.125  Sum_probs=62.9

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC--c-EEEeCCCHHHHHHhcCCccEEE
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA--D-KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~--~-~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ..+++|++||=+|+|. |..++.+|+. +.+|+.++.+++..+.+++   ..|.  . .++.. +..........+|+++
T Consensus        29 l~~~~g~~VLDiGcGs-G~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~~~~~~D~v~  105 (186)
T d1l3ia_          29 AEPGKNDVAVDVGCGT-GGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKIPDIDIAV  105 (186)
T ss_dssp             HCCCTTCEEEEESCTT-SHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTSCCEEEEE
T ss_pred             cCCCCCCEEEEEECCe-Eccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhcccccCCcCEEE
Confidence            3459999999999853 5556666664 5699999999987766643   3453  2 23332 2222222236799988


Q ss_pred             ECCCC---chhHHHHHHhcccCCEEEEE
Q 019199          250 DTASG---DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       250 d~~g~---~~~~~~~~~~l~~~G~iv~~  274 (344)
                      -....   ...++.+.+.|+|+|+++..
T Consensus       106 ~~~~~~~~~~~~~~~~~~LkpgG~lvi~  133 (186)
T d1l3ia_         106 VGGSGGELQEILRIIKDKLKPGGRIIVT  133 (186)
T ss_dssp             ESCCTTCHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EeCccccchHHHHHHHHHhCcCCEEEEE
Confidence            65443   23467778899999999765

>d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Neisseria meningitidis, serogroup B [TaxId: 487]

Probab=96.61  E-value=0.0054  Score=46.33  Aligned_cols=83  Identities=18%  Similarity=0.224  Sum_probs=59.2

Q ss_pred             EEEEECCChHHHHHHH-HHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          183 SLGVIGLGGLGHMAVK-FGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~-~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      ++.++|+|.+|.+.+. +.+.-+.+|++.++++++.+.+.+++|.... +..+     + -...|++|-++. +..+..+
T Consensus         2 kI~fIG~G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~~~-~~~~-----~-v~~~Div~lavk-P~~~~~v   73 (152)
T d1yqga2           2 NVYFLGGGNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVETS-ATLP-----E-LHSDDVLILAVK-PQDMEAA   73 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCEEE-SSCC-----C-CCTTSEEEECSC-HHHHHHH
T ss_pred             EEEEEcCcHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccccc-cccc-----c-ccccceEEEecC-HHHHHHh
Confidence            4778899999998877 4454446999999999998888777886432 2211     1 134799998886 4447888


Q ss_pred             HHhcccCCEEEE
Q 019199          262 MSLLKVAGVYVL  273 (344)
Q Consensus       262 ~~~l~~~G~iv~  273 (344)
                      ++.+++.++++.
T Consensus        74 ~~~l~~~~~~vi   85 (152)
T d1yqga2          74 CKNIRTNGALVL   85 (152)
T ss_dssp             HTTCCCTTCEEE
T ss_pred             HHHHhhcccEEe
Confidence            888877666543

>d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=96.60  E-value=0.0064  Score=49.41  Aligned_cols=98  Identities=10%  Similarity=0.047  Sum_probs=63.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC---CcEEEeC--CCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG---ADKFVVS--SDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g---~~~~v~~--~~~~~~~~~~~~~dvvid  250 (344)
                      .++||++||-+|+|. |..+..+++... .+|++++-+++..+.+.+...   ....+..  ..+.........+|+++.
T Consensus        71 ~ikpG~~VLDlGcGs-G~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~v~~i~~  149 (230)
T d1g8sa_          71 PIKRDSKILYLGASA-GTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDANKPQEYANIVEKVDVIYE  149 (230)
T ss_dssp             CCCTTCEEEEESCCS-SHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTTCGGGGTTTCCCEEEEEE
T ss_pred             CCCCCCEEEEeCEEc-CHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeeccCcccccccceeEEeec
Confidence            359999999999864 778888888653 489999999988777744322   2222222  222222222245667776


Q ss_pred             CCCCc----hhHHHHHHhcccCCEEEEEc
Q 019199          251 TASGD----HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       251 ~~g~~----~~~~~~~~~l~~~G~iv~~g  275 (344)
                      .....    ..+.++.+.|+|+|+++..-
T Consensus       150 ~~~~~~~~~~~l~~~~r~LKpgG~~~i~~  178 (230)
T d1g8sa_         150 DVAQPNQAEILIKNAKWFLKKGGYGMIAI  178 (230)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccchHHHHHHHHHHHHhcccCceEEEEe
Confidence            55432    22667778899999988763

>d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: beta-keto acyl carrier protein reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.59  E-value=0.001  Score=54.73  Aligned_cols=70  Identities=17%  Similarity=0.133  Sum_probs=53.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-------cCCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-------GKSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-------~~~~dvvid~  251 (344)
                      .|+++||+|+ +++|.+.++.+...|++|+++++++++.+.+     .....|..+++.++++       .+++|+++++
T Consensus         6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~-----~~~~~Dv~~~~~v~~~~~~~~~~~g~iDiLVnn   80 (237)
T d1uzma1           6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGL-----FGVEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN   80 (237)
T ss_dssp             CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTS-----EEEECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCc-----eEEEEecCCHHHHHHHHHHHHHhcCCceEEEee
Confidence            5789999998 8999999999999999999999987755422     1233556666544432       2679999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      +|.
T Consensus        81 AG~   83 (237)
T d1uzma1          81 AGL   83 (237)
T ss_dssp             CSC
T ss_pred             ecc
Confidence            874

>d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Putative carbonyl reductase sniffer
species: Caenorhabditis elegans [TaxId: 6239]

Probab=96.59  E-value=0.0025  Score=52.63  Aligned_cols=73  Identities=18%  Similarity=0.156  Sum_probs=52.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCc---EEEeCCCHHHHHHh--------c-CCcc
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGAD---KFVVSSDLEQMKAL--------G-KSLD  246 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~---~~v~~~~~~~~~~~--------~-~~~d  246 (344)
                      .+|||+|+ +++|++.++.+...|+  +|+.+.++.++++.+.+..+..   ..+|-.+.+.+++.        + .++|
T Consensus         4 KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~id   83 (250)
T d1yo6a1           4 GSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGLS   83 (250)
T ss_dssp             SEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCCC
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCeE
Confidence            78999998 9999998888877886  6888999999888875444432   22345555443322        1 3599


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++++.|.
T Consensus        84 ilinnAG~   91 (250)
T d1yo6a1          84 LLINNAGV   91 (250)
T ss_dssp             EEEECCCC
T ss_pred             EEEEcCcc
Confidence            99999884

>d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Drosophila alcohol dehydrogenase
species: Fly (Drosophila lebanonensis) [TaxId: 7225]

Probab=96.51  E-value=0.0032  Score=52.16  Aligned_cols=75  Identities=16%  Similarity=0.104  Sum_probs=50.7

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCc-E---EEeCC-CHHHHHHh-------cC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGAD-K---FVVSS-DLEQMKAL-------GK  243 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~-~---~v~~~-~~~~~~~~-------~~  243 (344)
                      .|++|||+|+ +++|++.+..+...|++|+++.++.++.+.+   ....+.. .   ..|.. +...+++.       .+
T Consensus         4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~g   83 (254)
T d1sbya1           4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK   83 (254)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred             CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHcC
Confidence            5889999987 8999999999999999999888776654333   1223321 1   22332 32222221       26


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|++++++|.
T Consensus        84 ~iDilvnnAG~   94 (254)
T d1sbya1          84 TVDILINGAGI   94 (254)
T ss_dssp             CCCEEEECCCC
T ss_pred             CCCEEEeCCCC
Confidence            89999999985

>d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.0052  Score=50.48  Aligned_cols=48  Identities=23%  Similarity=0.235  Sum_probs=43.0

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD  227 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~  227 (344)
                      +|+++||+|+ +++|.+.++.+...|++|+++++++++++.+.++++..
T Consensus         4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~   52 (248)
T d2o23a1           4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN   52 (248)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence            6899999998 89999999999999999999999999888887787753

>d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein BH2331
species: Bacillus halodurans [TaxId: 86665]

Probab=96.49  E-value=0.0017  Score=52.74  Aligned_cols=101  Identities=17%  Similarity=0.160  Sum_probs=65.5

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHhcCCcc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~~~~~d  246 (344)
                      +.+...++++++||-+|+| .|..+..+++. |++|++++.+++..+.+++   ..+..  ..+..+.. .+.-..+.||
T Consensus         7 ll~~~~l~~~~rVLDiGcG-~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~l~~~~~~fD   83 (231)
T d1vl5a_           7 LMQIAALKGNEEVLDVATG-GGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-QMPFTDERFH   83 (231)
T ss_dssp             HHHHHTCCSCCEEEEETCT-TCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--CCCSCTTCEE
T ss_pred             HHHhcCCCCcCEEEEeccc-CcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccccc-cccccccccc
Confidence            3344556999999999987 47777777754 7899999999887666532   23432  22222211 1111125699


Q ss_pred             EEEECCC-----Cc-hhHHHHHHhcccCCEEEEEc
Q 019199          247 FIIDTAS-----GD-HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       247 vvid~~g-----~~-~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +|+..-.     .+ ..+.++.+.|+|+|+++...
T Consensus        84 ~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~  118 (231)
T d1vl5a_          84 IVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVD  118 (231)
T ss_dssp             EEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccccccccccCCHHHHHHHHHHhcCCCcEEEEEe
Confidence            9975433     22 34788999999999999764

>d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Fibrillarin homologue
domain: Fibrillarin homologue
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=96.48  E-value=0.0029  Score=50.76  Aligned_cols=98  Identities=13%  Similarity=0.069  Sum_probs=64.2

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHh---CCCcEEEeC--CCHHHHHHhcCCccEEEE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSL---LGADKFVVS--SDLEQMKALGKSLDFIID  250 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~---~g~~~~v~~--~~~~~~~~~~~~~dvvid  250 (344)
                      .++||++||=+|+|+ |..+..+++..+. +|++++-+++..+.+.+.   .+-...+..  .++.........+|+++.
T Consensus        53 ~lkpg~~VLDlGcG~-G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~~~~~~~~~~~~vd~v~~  131 (209)
T d1nt2a_          53 KLRGDERVLYLGAAS-GTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDASKPWKYSGIVEKVDLIYQ  131 (209)
T ss_dssp             CCCSSCEEEEETCTT-SHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTTCGGGTTTTCCCEEEEEE
T ss_pred             CCCCCCEEEEeCCcC-CHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeeccCccccccccceEEEEEe
Confidence            359999999999864 6677888887754 899999999877665333   232222211  222222222246788876


Q ss_pred             CCCCch----hHHHHHHhcccCCEEEEEc
Q 019199          251 TASGDH----PFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       251 ~~g~~~----~~~~~~~~l~~~G~iv~~g  275 (344)
                      ....+.    .+.++.+.|+|+|+++..-
T Consensus       132 ~~~~~~~~~~~l~~~~~~LkpgG~l~i~~  160 (209)
T d1nt2a_         132 DIAQKNQIEILKANAEFFLKEKGEVVIMV  160 (209)
T ss_dssp             CCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence            654332    3667778999999998764

>d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: tRNA(1-methyladenosine) methyltransferase-like
domain: Hypothetical protein FLJ20628
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.46  E-value=0.0043  Score=53.18  Aligned_cols=102  Identities=18%  Similarity=0.215  Sum_probs=65.7

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCC--------------Cc-EEEeCCCH-H
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLG--------------AD-KFVVSSDL-E  236 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g--------------~~-~~v~~~~~-~  236 (344)
                      ...++||++||=.|+|+ |..++.+|+..|.  +|+.++.+++..+.+++.+-              .+ ..+...+. +
T Consensus        93 ~l~i~pG~rVLE~GtGs-G~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~nv~~~~~di~~  171 (324)
T d2b25a1          93 MMDINPGDTVLEAGSGS-GGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHKDISG  171 (324)
T ss_dssp             HHTCCTTCEEEEECCTT-SHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEESCTTC
T ss_pred             HhCCCCCCEEEEecccc-cHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccceeEEecchhh
Confidence            34459999999999864 8889999998875  89999999998777644321              11 11111111 1


Q ss_pred             HHHHh-cCCccEEEECCCC-chhHHHHHHhcccCCEEEEEcCC
Q 019199          237 QMKAL-GKSLDFIIDTASG-DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       237 ~~~~~-~~~~dvvid~~g~-~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..... ...+|.||--... ...+..+.+.|+|+|+++.+-.+
T Consensus       172 ~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P~  214 (324)
T d2b25a1         172 ATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVVN  214 (324)
T ss_dssp             CC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEESS
T ss_pred             cccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeCC
Confidence            10111 2458877633333 34589999999999999987543

>d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical methyltransferase TM1389
species: Thermotoga maritima [TaxId: 2336]

Probab=96.45  E-value=0.0022  Score=52.36  Aligned_cols=92  Identities=15%  Similarity=0.209  Sum_probs=64.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC----
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG----  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~----  254 (344)
                      .++.+||-+|+| .|..+..+++ .|++|++++.+++.++.+.+. +....+.....+ +.-..+.+|+|+.....    
T Consensus        41 ~~~~~vLDiGcG-~G~~~~~l~~-~~~~v~giD~s~~~l~~a~~~-~~~~~~~~~~~~-l~~~~~~fD~ii~~~~~~~~~  116 (246)
T d2avna1          41 KNPCRVLDLGGG-TGKWSLFLQE-RGFEVVLVDPSKEMLEVAREK-GVKNVVEAKAED-LPFPSGAFEAVLALGDVLSYV  116 (246)
T ss_dssp             CSCCEEEEETCT-TCHHHHHHHT-TTCEEEEEESCHHHHHHHHHH-TCSCEEECCTTS-CCSCTTCEEEEEECSSHHHHC
T ss_pred             CCCCEEEEECCC-Cchhcccccc-cceEEEEeecccccccccccc-cccccccccccc-cccccccccceeeecchhhhh
Confidence            678899999997 4888888876 589999999999999888544 443334332221 11113679998864431    


Q ss_pred             ---chhHHHHHHhcccCCEEEEE
Q 019199          255 ---DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       255 ---~~~~~~~~~~l~~~G~iv~~  274 (344)
                         ...++.+.+.|+|+|.++..
T Consensus       117 ~d~~~~l~~i~r~Lk~gG~~ii~  139 (246)
T d2avna1         117 ENKDKAFSEIRRVLVPDGLLIAT  139 (246)
T ss_dssp             SCHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhHHHHHHHHHhhcCcCcEEEEE
Confidence               23467888899999999764

>d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Guanidinoacetate methyltransferase
domain: Guanidinoacetate methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.0028  Score=51.58  Aligned_cols=96  Identities=18%  Similarity=0.084  Sum_probs=63.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC---CcEEEeCCCHHH-HHHh-cCCccEE-EECC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG---ADKFVVSSDLEQ-MKAL-GKSLDFI-IDTA  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g---~~~~v~~~~~~~-~~~~-~~~~dvv-id~~  252 (344)
                      .+|.+||-+|+|. |..+..+++..+.+|++++.+++.++.+++...   ....+...+... .... .+.+|.+ +|..
T Consensus        52 ~~g~~VLdIGcG~-G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fD~i~fD~~  130 (229)
T d1zx0a1          52 SKGGRVLEVGFGM-AIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKGLWEDVAPTLPDGHFDGILYDTY  130 (229)
T ss_dssp             TTCEEEEEECCTT-SHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEESCHHHHGGGSCTTCEEEEEECCC
T ss_pred             cCCCeEEEeeccc-hHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccccccccccccccccccceeeccc
Confidence            7889999999863 778888888766799999999998888754443   221122222222 2222 2568887 4655


Q ss_pred             CCc----------hhHHHHHHhcccCCEEEEEc
Q 019199          253 SGD----------HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       253 g~~----------~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ...          ..+..+.+.|+|||+++...
T Consensus       131 ~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~  163 (229)
T d1zx0a1         131 PLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN  163 (229)
T ss_dssp             CCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred             ccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence            432          13566888999999998653

>d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical protein PH0226
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=96.37  E-value=0.0038  Score=50.15  Aligned_cols=94  Identities=17%  Similarity=0.256  Sum_probs=61.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCC-cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGA-DKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ++++++||-+|+|. |..+..+++ .|.+|++++.+++.++.+++.   .+. ...+..+. ..+......+|+|+-...
T Consensus        35 l~~~~~ILDiGcG~-G~~~~~la~-~~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~-~~l~~~~~~fD~I~~~~~  111 (226)
T d1ve3a1          35 MKKRGKVLDLACGV-GGFSFLLED-YGFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDA-RKLSFEDKTFDYVIFIDS  111 (226)
T ss_dssp             CCSCCEEEEETCTT-SHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCT-TSCCSCTTCEEEEEEESC
T ss_pred             cCCCCEEEEECCCc-chhhhhHhh-hhcccccccccccchhhhhhhhcccccccccccccc-ccccccCcCceEEEEecc
Confidence            37888999999974 777788886 588999999998877666432   232 22222211 111111256899875433


Q ss_pred             Cc--------hhHHHHHHhcccCCEEEEE
Q 019199          254 GD--------HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       254 ~~--------~~~~~~~~~l~~~G~iv~~  274 (344)
                      -.        ..++.+.+.|+|+|+++..
T Consensus       112 l~~~~~~d~~~~l~~i~~~LkpgG~lii~  140 (226)
T d1ve3a1         112 IVHFEPLELNQVFKEVRRVLKPSGKFIMY  140 (226)
T ss_dssp             GGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             hhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence            11        2367788899999998755

>d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Pyrroline-5-carboxylate reductase ProC
species: Streptococcus pyogenes [TaxId: 1314]

Probab=96.31  E-value=0.0099  Score=44.84  Aligned_cols=86  Identities=16%  Similarity=0.220  Sum_probs=64.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                      ++.++|+|.+|.+.+.-....|.++++..++.++.+.+.+++|....   .+.+.   ...+.|+||-++. +..+..++
T Consensus         2 kIg~IG~G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~---~~~~~---~~~~~dvIilavk-p~~~~~vl   74 (152)
T d2ahra2           2 KIGIIGVGKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYA---MSHQD---LIDQVDLVILGIK-PQLFETVL   74 (152)
T ss_dssp             EEEEECCSHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBC---SSHHH---HHHTCSEEEECSC-GGGHHHHH
T ss_pred             EEEEEeccHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeee---chhhh---hhhccceeeeecc-hHhHHHHh
Confidence            46788999999998887777788999999999988887678885432   22222   2245999999986 44488999


Q ss_pred             HhcccCCEEEEEc
Q 019199          263 SLLKVAGVYVLVG  275 (344)
Q Consensus       263 ~~l~~~G~iv~~g  275 (344)
                      +.++++..++.+.
T Consensus        75 ~~l~~~~~iis~~   87 (152)
T d2ahra2          75 KPLHFKQPIISMA   87 (152)
T ss_dssp             TTSCCCSCEEECC
T ss_pred             hhcccceeEeccc
Confidence            9998887777664

>d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Escherichia coli [TaxId: 562]

Probab=96.25  E-value=0.013  Score=44.58  Aligned_cols=96  Identities=18%  Similarity=0.105  Sum_probs=73.0

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      ..+||+....+..|.....--.|.+++|+|. ..+|.-+..++...|++|+++......+...                 
T Consensus        15 ~~~PcTp~aI~~lL~~y~i~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~~l~~~-----------------   77 (166)
T d1b0aa1          15 RLRPCTPRGIVTLLERYNIDTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTKNLRHH-----------------   77 (166)
T ss_dssp             SSCCHHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCSCHHHH-----------------
T ss_pred             CCCCchHHHHHHHHHHcCcccccceEEEEeccccccHHHHHHHHHhhccccccccccchhHHH-----------------
Confidence            3577777777777776666578999999997 7899999999999999999887665544322                 


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                          .+.+|+++-++|.+..+.  -+.++++..++++|..
T Consensus        78 ----~~~ADivI~a~G~p~~i~--~~~vk~g~vvIDvGi~  111 (166)
T d1b0aa1          78 ----VENADLLIVAVGKPGFIP--GDWIKEGAIVIDVGIN  111 (166)
T ss_dssp             ----HHHCSEEEECSCCTTCBC--TTTSCTTCEEEECCCE
T ss_pred             ----HhhhhHhhhhccCccccc--ccccCCCcEEEecCce
Confidence                133889999998776333  3577888999998865

>d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Escherichia coli [TaxId: 562]

Probab=96.23  E-value=0.016  Score=47.66  Aligned_cols=76  Identities=13%  Similarity=0.132  Sum_probs=50.0

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCchhHHHH---HHhCCCcEEEe--CCCHHHHHH-------hcC
Q 019199          179 QPGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTSKKEEA---LSLLGADKFVV--SSDLEQMKA-------LGK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~---~~~~g~~~~v~--~~~~~~~~~-------~~~  243 (344)
                      -.|+++||+|+ +  ++|.+.+..+...|++|++.+++++..+.+   .+..+....+.  ..+......       ..+
T Consensus         3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (258)
T d1qsga_           3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP   82 (258)
T ss_dssp             TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred             CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence            46899999987 6  688999999989999999999987644333   23344332222  233322221       136


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ..|+.+++.+.
T Consensus        83 ~~d~~v~~a~~   93 (258)
T d1qsga_          83 KFDGFVHSIGF   93 (258)
T ss_dssp             SEEEEEECCCC
T ss_pred             ccceEEEeecc
Confidence            78999987754

>d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sepiapterin reductase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.20  E-value=0.011  Score=48.79  Aligned_cols=74  Identities=18%  Similarity=0.080  Sum_probs=48.4

Q ss_pred             CCCEEEEECC-ChHHHHHHHH-HHH--CCCeEEEEeCCchhHHHHHHhC----CCcE----EEeCCCHHHHHHh------
Q 019199          180 PGKSLGVIGL-GGLGHMAVKF-GKA--FGLNVTVLSTSTSKKEEALSLL----GADK----FVVSSDLEQMKAL------  241 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~-a~~--~g~~V~~~~~~~~~~~~~~~~~----g~~~----~v~~~~~~~~~~~------  241 (344)
                      .|+.+||+|+ +++|.+.++. |+.  .|++|+++++++++++.+.+++    +...    ..|-.+++.+.++      
T Consensus         5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~   84 (259)
T d1oaaa_           5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE   84 (259)
T ss_dssp             BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred             CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence            4667788888 8999987654 553  5899999999999887765443    2112    2345555443322      


Q ss_pred             -----cCCccEEEECCC
Q 019199          242 -----GKSLDFIIDTAS  253 (344)
Q Consensus       242 -----~~~~dvvid~~g  253 (344)
                           ....|+++++.|
T Consensus        85 ~~~~~~~~~~~lvnnag  101 (259)
T d1oaaa_          85 LPRPEGLQRLLLINNAA  101 (259)
T ss_dssp             SCCCTTCCEEEEEECCC
T ss_pred             hhhhccCceEEEEeccc
Confidence                 135678888765

>d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=96.19  E-value=0.013  Score=45.78  Aligned_cols=109  Identities=23%  Similarity=0.251  Sum_probs=76.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~  257 (344)
                      -.|.++.|+|.|.+|...+++++.+|.+|++.++...+....  ..+...    .+.   +++-...|++.-++.. +.+
T Consensus        42 l~~k~vgiiG~G~IG~~va~~~~~fg~~v~~~d~~~~~~~~~--~~~~~~----~~l---~ell~~sDiv~~~~Plt~~T  112 (184)
T d1ygya1          42 IFGKTVGVVGLGRIGQLVAQRIAAFGAYVVAYDPYVSPARAA--QLGIEL----LSL---DDLLARADFISVHLPKTPET  112 (184)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCHHHHH--HHTCEE----CCH---HHHHHHCSEEEECCCCSTTT
T ss_pred             ccceeeeeccccchhHHHHHHhhhccceEEeecCCCChhHHh--hcCcee----ccH---HHHHhhCCEEEEcCCCCchh
Confidence            467899999999999999999999999999999776554433  334321    122   2223448998876652 221


Q ss_pred             ----HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          258 ----FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                          -...++.++++..+|.++-..-+             +-+.+++.+.+|++..
T Consensus       113 ~~lin~~~l~~mk~~a~lIN~sRG~iV-------------de~aL~~aL~~~~i~~  155 (184)
T d1ygya1         113 AGLIDKEALAKTKPGVIIVNAARGGLV-------------DEAALADAITGGHVRA  155 (184)
T ss_dssp             TTCBCHHHHTTSCTTEEEEECSCTTSB-------------CHHHHHHHHHTSSEEE
T ss_pred             hhhhhHHHHhhhCCCceEEEecchhhh-------------hhHHHHHHHhcCcEeE
Confidence                34788899999999888643222             2467888999999864

>d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Phenylalanine dehydrogenase
species: Rhodococcus sp., M4 [TaxId: 1831]

Probab=96.17  E-value=0.0083  Score=47.55  Aligned_cols=49  Identities=27%  Similarity=0.346  Sum_probs=43.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK  228 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~  228 (344)
                      -.|.+|+|.|.|.+|..+++++...|++|++.+.+.++.... ..+|.+.
T Consensus        25 L~gk~v~IqG~G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~-~~~g~~~   73 (201)
T d1c1da1          25 LDGLTVLVQGLGAVGGSLASLAAEAGAQLLVADTDTERVAHA-VALGHTA   73 (201)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEecchHHHHHHH-Hhhcccc
Confidence            478999999999999999999999999999999998888877 5677543

>d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein At5g02240 (T7H20 290)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.15  E-value=0.0087  Score=48.07  Aligned_cols=71  Identities=21%  Similarity=0.104  Sum_probs=50.7

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      .+|||+|+ |.+|..++..+...|.  +|+...+++++....  .-+... ..|..+.+...+..+++|.++.+.+.
T Consensus         4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~--~~~~~~~~~d~~~~~~~~~~~~~~d~vi~~a~~   78 (252)
T d2q46a1           4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKI--GGEADVFIGDITDADSINPAFQGIDALVILTSA   78 (252)
T ss_dssp             CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHT--TCCTTEEECCTTSHHHHHHHHTTCSEEEECCCC
T ss_pred             CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhc--cCCcEEEEeeeccccccccccccceeeEEEEee
Confidence            57999998 9999999999988886  466667777665443  223332 33556666666666789999988763

>d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=96.09  E-value=0.012  Score=51.87  Aligned_cols=105  Identities=13%  Similarity=0.111  Sum_probs=67.9

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHh----------CC----CcEEEeC-
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSL----------LG----ADKFVVS-  232 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~----------~g----~~~~v~~-  232 (344)
                      ...+... .+++|+++|-+|+| .|..+.++|+..|+ +|++++-++...+.+.+.          +|    ....... 
T Consensus       206 ~~Il~~l-~Lkpgd~fLDLGCG-~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~~~  283 (406)
T d1u2za_         206 SDVYQQC-QLKKGDTFMDLGSG-VGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSLKK  283 (406)
T ss_dssp             HHHHHHT-TCCTTCEEEEESCT-TSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEESS
T ss_pred             HHHHHHh-CCCCCCEEEeCCCC-CcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeeeee
Confidence            3345444 45999999999987 58899999999987 899999998766555221          11    1111111 


Q ss_pred             --CCHHHHHHhcCCccEEEEC-CCC----chhHHHHHHhcccCCEEEEEc
Q 019199          233 --SDLEQMKALGKSLDFIIDT-ASG----DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       233 --~~~~~~~~~~~~~dvvid~-~g~----~~~~~~~~~~l~~~G~iv~~g  275 (344)
                        .+.+........+|+++-. .-.    ...+.++.+.|+|||++|..-
T Consensus       284 ~f~~~~~~d~~~~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~  333 (406)
T d1u2za_         284 SFVDNNRVAELIPQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK  333 (406)
T ss_dssp             CSTTCHHHHHHGGGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             chhhccccccccccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence              1123333333568888743 222    223667888999999999864

>d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Helicobacter pylori [TaxId: 210]

Probab=96.08  E-value=0.015  Score=48.24  Aligned_cols=76  Identities=18%  Similarity=0.114  Sum_probs=51.4

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCch---hHHHHHHhCCCcE--EEeCCCHHHHHH-------hcC
Q 019199          179 QPGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS---KKEEALSLLGADK--FVVSSDLEQMKA-------LGK  243 (344)
Q Consensus       179 ~~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~---~~~~~~~~~g~~~--~v~~~~~~~~~~-------~~~  243 (344)
                      -.|+++||+|+ |  ++|.+.++.+...|++|++++++++   +.+.+.++.+...  ..+..+.....+       ..+
T Consensus         3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~g   82 (274)
T d2pd4a1           3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLG   82 (274)
T ss_dssp             TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTS
T ss_pred             CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHcC
Confidence            35899999986 5  7999999999999999999998864   3333333333222  223344333222       237


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      .+|+++.+.+.
T Consensus        83 ~id~lV~nag~   93 (274)
T d2pd4a1          83 SLDFIVHSVAF   93 (274)
T ss_dssp             CEEEEEECCCC
T ss_pred             CCCeEEeeccc
Confidence            89999988874

>d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Transcription corepressor CtbP
species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]

Probab=96.04  E-value=0.011  Score=46.49  Aligned_cols=110  Identities=25%  Similarity=0.315  Sum_probs=75.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC-Cchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS-GDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g-~~~~  257 (344)
                      -.|.+|.|+|.|.+|...+++++.+|++|++.++.......  ...+...   ..+.+   ++-...|++.-+.. ++.+
T Consensus        47 L~gktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~--~~~~~~~---~~~l~---~ll~~sD~i~~~~plt~~T  118 (193)
T d1mx3a1          47 IRGETLGIIGLGRVGQAVALRAKAFGFNVLFYDPYLSDGVE--RALGLQR---VSTLQ---DLLFHSDCVTLHCGLNEHN  118 (193)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHTTTCEEEEECTTSCTTHH--HHHTCEE---CSSHH---HHHHHCSEEEECCCCCTTC
T ss_pred             eeCceEEEeccccccccceeeeeccccceeeccCcccccch--hhhcccc---ccchh---hccccCCEEEEeecccccc
Confidence            46889999999999999999999999999999876553322  2334321   22222   22234788876554 2222


Q ss_pred             ----HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          258 ----FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       258 ----~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                          -...++.++++..+|.++-..-+             +-+.+++.+.+|++..
T Consensus       119 ~~li~~~~l~~mk~~a~lIN~sRG~iv-------------de~aL~~aL~~~~i~~  161 (193)
T d1mx3a1         119 HHLINDFTVKQMRQGAFLVNTARGGLV-------------DEKALAQALKEGRIRG  161 (193)
T ss_dssp             TTSBSHHHHTTSCTTEEEEECSCTTSB-------------CHHHHHHHHHHTSEEE
T ss_pred             hhhhhHHHHhccCCCCeEEecCCceEE-------------cHHHHHHHHHcCCceE
Confidence                34678899999998888643222             2467888999998854

>d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Putative formate dehydrogenase
species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]

Probab=96.04  E-value=0.0076  Score=46.97  Aligned_cols=104  Identities=19%  Similarity=0.254  Sum_probs=74.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~-  257 (344)
                      .|.+|.|+|.|.+|...+++++.+|++|++.++...+.       ... ..  .   .++++....|+++.++.- +.+ 
T Consensus        41 ~gk~vgIiG~G~IG~~va~~l~~~g~~v~~~d~~~~~~-------~~~-~~--~---~l~ell~~sDiv~~~~pl~~~t~  107 (181)
T d1qp8a1          41 QGEKVAVLGLGEIGTRVGKILAALGAQVRGFSRTPKEG-------PWR-FT--N---SLEEALREARAAVCALPLNKHTR  107 (181)
T ss_dssp             TTCEEEEESCSTHHHHHHHHHHHTTCEEEEECSSCCCS-------SSC-CB--S---CSHHHHTTCSEEEECCCCSTTTT
T ss_pred             cCceEEEeccccccccceeeeecccccccccccccccc-------cee-ee--e---chhhhhhccchhhcccccccccc
Confidence            58899999999999999999999999999998765321       111 11  1   123444678999876652 222 


Q ss_pred             ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                         -...++.++++..+|.++-..-.             +.+.+++.++++++..
T Consensus       108 ~li~~~~l~~mk~~ailIN~~RG~iv-------------d~~aL~~aL~~~~i~~  149 (181)
T d1qp8a1         108 GLVKYQHLALMAEDAVFVNVGRAEVL-------------DRDGVLRILKERPQFI  149 (181)
T ss_dssp             TCBCHHHHTTSCTTCEEEECSCGGGB-------------CHHHHHHHHHHCTTCE
T ss_pred             cccccceeeeccccceEEeccccccc-------------cchhhhhhcccCcEEE
Confidence               26788999999999998633211             2567888899998864

>d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]

Probab=96.03  E-value=0.015  Score=48.00  Aligned_cols=75  Identities=15%  Similarity=0.223  Sum_probs=52.1

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCchhH-HHHHHhCCCc---EEEeCCCHHHHHH--------h--
Q 019199          179 QPGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTSKK-EEALSLLGAD---KFVVSSDLEQMKA--------L--  241 (344)
Q Consensus       179 ~~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~~~-~~~~~~~g~~---~~v~~~~~~~~~~--------~--  241 (344)
                      -.|+++||+|+ |  ++|.+.++.+...|++|+++.++.++. +.+.++++..   ...|-.+++....        .  
T Consensus         4 l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~~   83 (268)
T d2h7ma1           4 LDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGA   83 (268)
T ss_dssp             TTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCT
T ss_pred             CCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhcccc
Confidence            46889999985 4  599999998999999999999988876 3344556632   2234444432211        1  


Q ss_pred             cCCccEEEECCC
Q 019199          242 GKSLDFIIDTAS  253 (344)
Q Consensus       242 ~~~~dvvid~~g  253 (344)
                      .+.+|+++++.+
T Consensus        84 ~~~ld~~i~~ag   95 (268)
T d2h7ma1          84 GNKLDGVVHSIG   95 (268)
T ss_dssp             TCCEEEEEECCC
T ss_pred             CCCcceeeeccc
Confidence            256899999887

>d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Aquifex aeolicus [TaxId: 63363]

Probab=95.99  E-value=0.022  Score=43.52  Aligned_cols=90  Identities=17%  Similarity=0.101  Sum_probs=61.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCC-cEEEeCCCHHHHHHhcCCccEEEECCCCch---
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGA-DKFVVSSDLEQMKALGKSLDFIIDTASGDH---  256 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~g~~~---  256 (344)
                      +++|+|+|.+|...+..++..|.  +|++.+++++.++.+ ++.+. +......+.    ......|+++-++....   
T Consensus         3 ~I~IIG~G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a-~~~~~~~~~~~~~~~----~~~~~~dlIila~p~~~~~~   77 (171)
T d2g5ca2           3 NVLIVGVGFMGGSFAKSLRRSGFKGKIYGYDINPESISKA-VDLGIIDEGTTSIAK----VEDFSPDFVMLSSPVRTFRE   77 (171)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHH-HHTTSCSEEESCGGG----GGGTCCSEEEECSCHHHHHH
T ss_pred             EEEEEccCHHHHHHHHHHHhcCCCeEEEEEECChHHHHHH-HHhhcchhhhhhhhh----hhccccccccccCCchhhhh
Confidence            68999999999999988888885  899999999999888 56663 444332221    11245788888777433   


Q ss_pred             hHHHHHHhcccCCEEEEEcCC
Q 019199          257 PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       257 ~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+..+...+.++..+++++..
T Consensus        78 vl~~l~~~~~~~~ii~d~~s~   98 (171)
T d2g5ca2          78 IAKKLSYILSEDATVTDQGSV   98 (171)
T ss_dssp             HHHHHHHHSCTTCEEEECCSC
T ss_pred             hhhhhhccccccccccccccc
Confidence            233444556666677766643

>d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.96  E-value=0.024  Score=47.39  Aligned_cols=95  Identities=14%  Similarity=0.090  Sum_probs=57.4

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEE---eCCch---hHHHHHHhCC---Cc---EEEeCCCHHHHHHh-----cCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVL---STSTS---KKEEALSLLG---AD---KFVVSSDLEQMKAL-----GKS  244 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~---~~~~~---~~~~~~~~~g---~~---~~v~~~~~~~~~~~-----~~~  244 (344)
                      .|||+|+ +++|.+.+..+...|++|+.+   .++.+   ++.+..+++.   ..   ..+|-.+.+.+.+.     .+.
T Consensus         4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~   83 (285)
T d1jtva_           4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR   83 (285)
T ss_dssp             EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred             EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence            3466787 999999998888889875544   34333   3333323432   22   23355666554443     267


Q ss_pred             ccEEEECCCCc-------------------------hhHHHHHHhc--ccCCEEEEEcCC
Q 019199          245 LDFIIDTASGD-------------------------HPFDAYMSLL--KVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvid~~g~~-------------------------~~~~~~~~~l--~~~G~iv~~g~~  277 (344)
                      +|+++++.|..                         ...+.++..|  +.+|+||.++..
T Consensus        84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~  143 (285)
T d1jtva_          84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSV  143 (285)
T ss_dssp             CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEG
T ss_pred             hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEech
Confidence            99999988743                         1223344445  336999998765

>d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: rRNA methyltransferase RlmA
domain: rRNA methyltransferase RlmA
species: Escherichia coli [TaxId: 562]

Probab=95.95  E-value=0.0066  Score=50.56  Aligned_cols=94  Identities=19%  Similarity=0.190  Sum_probs=65.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      .++.+||-+|+|. |..+..+++.. +.+++.++.+++.++.+.+.......+..+. ..+.-....+|+|+....-. .
T Consensus        83 ~~~~~iLDiGcG~-G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~-~~l~~~~~sfD~v~~~~~~~-~  159 (268)
T d1p91a_          83 DKATAVLDIGCGE-GYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASS-HRLPFSDTSMDAIIRIYAPC-K  159 (268)
T ss_dssp             TTCCEEEEETCTT-STTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCT-TSCSBCTTCEEEEEEESCCC-C
T ss_pred             CCCCEEEEeCCCC-cHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeeh-hhccCCCCCEEEEeecCCHH-H
Confidence            6788999999864 66777777765 5699999999998888865554322222211 11111125699998755444 4


Q ss_pred             HHHHHHhcccCCEEEEEc
Q 019199          258 FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g  275 (344)
                      +.++.+.|+|+|+++...
T Consensus       160 ~~e~~rvLkpgG~l~~~~  177 (268)
T d1p91a_         160 AEELARVVKPGGWVITAT  177 (268)
T ss_dssp             HHHHHHHEEEEEEEEEEE
T ss_pred             HHHHHHHhCCCcEEEEEe
Confidence            899999999999999775

>d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Rck domain from putative potassium channel Kch
species: Escherichia coli [TaxId: 562]

Probab=95.87  E-value=0.074  Score=39.65  Aligned_cols=95  Identities=21%  Similarity=0.076  Sum_probs=64.6

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCc
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGD  255 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~  255 (344)
                      .++++|.|.|.+|..+++.++..|.+|++++.++++.....+   ..|...+. |..+++.+++.+ ..++.++-+++..
T Consensus         3 knHiII~G~g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~~vi~Gd~~d~~~L~~a~i~~a~~vi~~~~~d   82 (153)
T d1id1a_           3 KDHFIVCGHSILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNADVIPGDSNDSSVLKKAGIDRCRAILALSDND   82 (153)
T ss_dssp             CSCEEEECCSHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTCEEEESCTTSHHHHHHHTTTTCSEEEECSSCH
T ss_pred             CCEEEEECCCHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCcEEEEccCcchHHHHHhccccCCEEEEccccH
Confidence            357899999999999999999999999999988765332212   23444332 345677777765 7899999888765


Q ss_pred             hh---HHHHHHhcccCCEEEEEc
Q 019199          256 HP---FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       256 ~~---~~~~~~~l~~~G~iv~~g  275 (344)
                      ..   .....+.+.+.-+++..-
T Consensus        83 ~~n~~~~~~~r~~~~~~~iia~~  105 (153)
T d1id1a_          83 ADNAFVVLSAKDMSSDVKTVLAV  105 (153)
T ss_dssp             HHHHHHHHHHHHHTSSSCEEEEC
T ss_pred             HHHHHHHHHHHHhCCCCceEEEE
Confidence            42   223334455666666553

>d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.82  E-value=0.035  Score=42.37  Aligned_cols=96  Identities=13%  Similarity=0.094  Sum_probs=71.9

Q ss_pred             cccchhhhHhHHHHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH
Q 019199          159 APLLCAGITVYTPMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ  237 (344)
Q Consensus       159 a~l~~~~~ta~~~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~  237 (344)
                      +.+||+....+..+...+.--.|.+|+|+|. ..+|.-+..++...|++|+.+......+...                 
T Consensus        17 ~~~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l~~~-----------------   79 (170)
T d1a4ia1          17 CFIPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHLDEE-----------------   79 (170)
T ss_dssp             CCCCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSHHHH-----------------
T ss_pred             CCCCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccHHHH-----------------
Confidence            4578887777777777776578999999997 7899999999999999999988766544322                 


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                          .+++|+++-++|.+..+.  -+.++++-.++++|..
T Consensus        80 ----~~~aDivi~a~G~~~~i~--~~~vk~g~iviDvgi~  113 (170)
T d1a4ia1          80 ----VNKGDILVVATGQPEMVK--GEWIKPGAIVIDCGIN  113 (170)
T ss_dssp             ----HTTCSEEEECCCCTTCBC--GGGSCTTCEEEECCCB
T ss_pred             ----Hhhccchhhccccccccc--cccccCCCeEeccCcc
Confidence                134777787787765322  3577888888887754

>d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-lactate dehydrogenase
species: Lactobacillus helveticus [TaxId: 1587]

Probab=95.81  E-value=0.015  Score=45.82  Aligned_cols=107  Identities=22%  Similarity=0.254  Sum_probs=74.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-ch--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DH--  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~--  256 (344)
                      .|.+|.|+|.|.+|...+++++.+|++|++.+.........   .+.    ...+   +.++-...|+++.++.. +.  
T Consensus        42 ~gk~vgIiG~G~IG~~va~~l~~fg~~V~~~d~~~~~~~~~---~~~----~~~~---l~~~l~~sDii~~~~plt~~T~  111 (197)
T d1j4aa1          42 RDQVVGVVGTGHIGQVFMQIMEGFGAKVITYDIFRNPELEK---KGY----YVDS---LDDLYKQADVISLHVPDVPANV  111 (197)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCHHHHH---TTC----BCSC---HHHHHHHCSEEEECSCCCGGGT
T ss_pred             cCCeEEEecccccchhHHHhHhhhcccccccCccccccccc---cee----eecc---ccccccccccccccCCcccccc
Confidence            58999999999999999999999999999998765533222   221    1122   22222348998877652 22  


Q ss_pred             --hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCcc
Q 019199          257 --PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYP  309 (344)
Q Consensus       257 --~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~  309 (344)
                        .-...++.|+++..+|.++-..-.             +.+.+++++.+|++..
T Consensus       112 ~li~~~~l~~mk~~a~lIN~sRG~iv-------------de~aL~~aL~~~~i~~  153 (197)
T d1j4aa1         112 HMINDESIAKMKQDVVIVNVSRGPLV-------------DTDAVIRGLDSGKIFG  153 (197)
T ss_dssp             TCBSHHHHHHSCTTEEEEECSCGGGB-------------CHHHHHHHHHHTSEEE
T ss_pred             ccccHHHHhhhCCccEEEecCchhhh-------------hhHHHHHHHhcccchh
Confidence              135778899999988888533111             2467888999998864

>d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Hypothetical methyltransferase PH1305
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.80  E-value=0.015  Score=47.31  Aligned_cols=93  Identities=16%  Similarity=0.175  Sum_probs=62.1

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      ..++.+||-+|+|+ |..+..+++ .|++|++++.+++-++.+++..   +....+...+...+ ...+.+|+|+...+.
T Consensus        39 ~~~~~~iLDiGcGt-G~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d~~~l-~~~~~fD~I~~~~~~  115 (251)
T d1wzna1          39 KREVRRVLDLACGT-GIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGDVLEI-AFKNEFDAVTMFFST  115 (251)
T ss_dssp             SSCCCEEEEETCTT-CHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESCGGGC-CCCSCEEEEEECSSG
T ss_pred             CCCCCEEEEeCCCC-Cccchhhcc-cceEEEEEeeccccccccccccccccccchheehhhhhc-ccccccchHhhhhhh
Confidence            37788999999975 777777777 5889999999998777775442   32211222222111 123579998875432


Q ss_pred             ------c---hhHHHHHHhcccCCEEEE
Q 019199          255 ------D---HPFDAYMSLLKVAGVYVL  273 (344)
Q Consensus       255 ------~---~~~~~~~~~l~~~G~iv~  273 (344)
                            +   ..++.+.+.|+|+|+++.
T Consensus       116 ~~~~~~~~~~~~L~~~~~~LkpgG~lii  143 (251)
T d1wzna1         116 IMYFDEEDLRKLFSKVAEALKPGGVFIT  143 (251)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred             hhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence                  1   247788889999999975

>d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Salmonella typhimurium [TaxId: 90371]

Probab=95.70  E-value=0.057  Score=40.78  Aligned_cols=86  Identities=21%  Similarity=0.234  Sum_probs=59.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                      +|-|+|.|.+|...+.-+...|.+|++.++++++.+.+ ++.++..   .....   +...+.|++|-++..+...+..+
T Consensus         2 kIgiIGlG~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~-~~~~~~~---~~~~~---e~~~~~d~ii~~v~~~~~v~~v~   74 (161)
T d1vpda2           2 KVGFIGLGIMGKPMSKNLLKAGYSLVVSDRNPEAIADV-IAAGAET---ASTAK---AIAEQCDVIITMLPNSPHVKEVA   74 (161)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH-HHTTCEE---CSSHH---HHHHHCSEEEECCSSHHHHHHHH
T ss_pred             EEEEEehhHHHHHHHHHHHHCCCeEEEEeCCcchhHHH-HHhhhhh---cccHH---HHHhCCCeEEEEcCCHHHHHHHH
Confidence            46788999999998888888999999999999998888 4666532   12222   12234788888887665455443


Q ss_pred             -------HhcccCCEEEEEc
Q 019199          263 -------SLLKVAGVYVLVG  275 (344)
Q Consensus       263 -------~~l~~~G~iv~~g  275 (344)
                             ..++++..+++++
T Consensus        75 ~~~~~~~~~~~~g~iiid~s   94 (161)
T d1vpda2          75 LGENGIIEGAKPGTVLIDMS   94 (161)
T ss_dssp             HSTTCHHHHCCTTCEEEECS
T ss_pred             hCCcchhhccCCCCEEEECC
Confidence                   3445566666654

>d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-2-hydroxyisocaproate dehydrogenase
species: Lactobacillus casei [TaxId: 1582]

Probab=95.69  E-value=0.017  Score=45.62  Aligned_cols=115  Identities=27%  Similarity=0.334  Sum_probs=77.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-ch--
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DH--  256 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~--  256 (344)
                      .|.+|.|+|.|.+|..++++++.+|++|++.++...+..    ....    ...+.   .++....|++.-++.. +.  
T Consensus        44 ~~ktvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~----~~~~----~~~~l---~~l~~~~D~v~~~~plt~~T~  112 (199)
T d1dxya1          44 GQQTVGVMGTGHIGQVAIKLFKGFGAKVIAYDPYPMKGD----HPDF----DYVSL---EDLFKQSDVIDLHVPGIEQNT  112 (199)
T ss_dssp             GGSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSSC----CTTC----EECCH---HHHHHHCSEEEECCCCCGGGT
T ss_pred             cceeeeeeecccccccccccccccceeeeccCCccchhh----hcch----hHHHH---HHHHHhcccceeeeccccccc
Confidence            478999999999999999999999999999997644321    1111    11222   2222347888776543 22  


Q ss_pred             --hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeCcc
Q 019199          257 --PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPIEN  318 (344)
Q Consensus       257 --~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~~  318 (344)
                        .-...++.|+++..+|.++-..-+             +-+.+++.+.+|++... .++|.-|-
T Consensus       113 ~li~~~~l~~mk~~a~lIN~aRG~vv-------------de~aL~~aL~~g~i~ga~lDV~~~EP  164 (199)
T d1dxya1         113 HIINEAAFNLMKPGAIVINTARPNLI-------------DTQAMLSNLKSGKLAGVGIDTYEYET  164 (199)
T ss_dssp             TSBCHHHHHHSCTTEEEEECSCTTSB-------------CHHHHHHHHHTTSEEEEEESSCTTHH
T ss_pred             ccccHHHhhccCCceEEEecccHhhh-------------hhHHHHHHHhcCCcceEeccccCCCC
Confidence              135678899999999888643221             24678889999998754 36665553

>d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: Glycinamide ribonucleotide transformylase PurT, N-domain
species: Escherichia coli [TaxId: 562]

Probab=95.69  E-value=0.0098  Score=42.27  Aligned_cols=65  Identities=14%  Similarity=0.222  Sum_probs=47.5

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhc--CCccEE
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALG--KSLDFI  248 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~--~~~dvv  248 (344)
                      +.+|.|+|+|.+|.+.++-|+.+|.++++.+.+++..  + ....... +.++++.+.+.+..  .++|++
T Consensus        11 ~~kigIlGgGQL~rMla~aA~~lG~~v~v~d~~~~~P--A-~~va~~~i~~~~~d~~~l~~~~~~~~~Dvi   78 (111)
T d1kjqa2          11 ATRVMLLGSGELGKEVAIECQRLGVEVIAVDRYADAP--A-MHVAHRSHVINMLDGDALRRVVELEKPHYI   78 (111)
T ss_dssp             CCEEEEESCSHHHHHHHHHHHTTTCEEEEEESSTTCG--G-GGGSSEEEECCTTCHHHHHHHHHHHCCSEE
T ss_pred             CCEEEEEeCCHHHHHHHHHHHHCCCEEEEEcCCCCCc--h-hhcCCeEEECCCCCHHHHHHHHHhhCCceE
Confidence            3569999999999999999999999999999876643  2 2333333 33566777666654  357887

>d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Glycine N-methyltransferase
domain: Glycine N-methyltransferase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=95.58  E-value=0.016  Score=48.73  Aligned_cols=94  Identities=15%  Similarity=0.205  Sum_probs=60.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC---CCc-----EEEeCCCHHHHH-H--hcCCccE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL---GAD-----KFVVSSDLEQMK-A--LGKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~---g~~-----~~v~~~~~~~~~-~--~~~~~dv  247 (344)
                      +++.+||-+|+|. |..++.+++. |++|++++.+++.++.+++..   +..     ..+..-+..... .  ...++|.
T Consensus        55 ~~~~~vLD~GcG~-G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~fd~  132 (292)
T d1xvaa_          55 HGCHRVLDVACGT-GVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEANWLTLDKDVPAGDGFDA  132 (292)
T ss_dssp             TTCCEEEESSCTT-SHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEECCGGGHHHHSCCTTCEEE
T ss_pred             cCCCEEEEecCCC-cHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeeccccccccccCCCCCceE
Confidence            5678999999864 7778888875 899999999998777664322   211     111111111111 1  1357999


Q ss_pred             EEECCCC------c--------hhHHHHHHhcccCCEEEEE
Q 019199          248 IIDTASG------D--------HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       248 vid~~g~------~--------~~~~~~~~~l~~~G~iv~~  274 (344)
                      |+.....      +        ..++.+.+.|+|+|+++.-
T Consensus       133 v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~~  173 (292)
T d1xvaa_         133 VICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVID  173 (292)
T ss_dssp             EEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             EEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEEe
Confidence            8864321      0        1488899999999999863

>d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Leucine dehydrogenase
species: Bacillus sphaericus [TaxId: 1421]

Probab=95.56  E-value=0.013  Score=47.34  Aligned_cols=49  Identities=24%  Similarity=0.294  Sum_probs=43.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD  227 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~  227 (344)
                      -.|.+|+|.|-|.+|..+++++...|++|++++.+..+.+.+....|+.
T Consensus        37 l~g~~v~IqG~GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~   85 (230)
T d1leha1          37 LEGLAVSVQGLGNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD   85 (230)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence            4689999999999999999999999999999999988888776667754

>d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein HI0319 (YecO)
domain: Hypothetical protein HI0319 (YecO)
species: Haemophilus influenzae [TaxId: 727]

Probab=95.54  E-value=0.0086  Score=48.27  Aligned_cols=95  Identities=13%  Similarity=0.078  Sum_probs=61.5

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHH---CCCeEEEEeCCchhHHHHHHhC---CCc--EEEeCCCHHHHHHhcCCccEEE
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKA---FGLNVTVLSTSTSKKEEALSLL---GAD--KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~---~g~~V~~~~~~~~~~~~~~~~~---g~~--~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ++++.+||-+|+|. |..+..+++.   .+++|++++.+++-++.+++.+   +..  ..+...+  ...-....+|+++
T Consensus        37 ~~~~~~vLDlGCGt-G~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~d--~~~~~~~~~d~i~  113 (225)
T d1im8a_          37 VTADSNVYDLGCSR-GAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCND--IRHVEIKNASMVI  113 (225)
T ss_dssp             CCTTCEEEEESCTT-CHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECSC--TTTCCCCSEEEEE
T ss_pred             cCCCCEEEEeccch-hhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccch--hhccccccceeeE
Confidence            48899999999863 6667777765   4779999999999888885433   221  1111111  1111124567765


Q ss_pred             ECCCC--------chhHHHHHHhcccCCEEEEEc
Q 019199          250 DTASG--------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       250 d~~g~--------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      -...-        ...++++.+.|+|+|.++...
T Consensus       114 ~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~  147 (225)
T d1im8a_         114 LNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE  147 (225)
T ss_dssp             EESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             EeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence            43321        134888899999999999864

>d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Ketopantoate reductase PanE
species: Escherichia coli [TaxId: 562]

Probab=95.53  E-value=0.0013  Score=50.49  Aligned_cols=87  Identities=16%  Similarity=0.189  Sum_probs=57.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC-----cEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA-----DKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~-----~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      +|+|+|+|.+|.+....+...|.+|.++++.+++.+.. +..+.     ...+.....+..    +.+|++|-++.... 
T Consensus         2 kI~IiGaG~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~----~~~D~iii~vka~~-   75 (167)
T d1ks9a2           2 KITVLGCGALGQLWLTALCKQGHEVQGWLRVPQPYCSV-NLVETDGSIFNESLTANDPDFL----ATSDLLLVTLKAWQ-   75 (167)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCSEEEE-EEECTTSCEEEEEEEESCHHHH----HTCSEEEECSCGGG-
T ss_pred             EEEEECcCHHHHHHHHHHHHCCCceEEEEcCHHHhhhh-ccccCCccccccccccchhhhh----cccceEEEeecccc-
Confidence            58999999999998888888999999999987754332 12221     112222222222    46999999998765 


Q ss_pred             HHHHHHh----cccCCEEEEEc
Q 019199          258 FDAYMSL----LKVAGVYVLVG  275 (344)
Q Consensus       258 ~~~~~~~----l~~~G~iv~~g  275 (344)
                      ...+++.    +.++..++.+.
T Consensus        76 ~~~~~~~l~~~~~~~~~Iv~~q   97 (167)
T d1ks9a2          76 VSDAVKSLASTLPVTTPILLIH   97 (167)
T ss_dssp             HHHHHHHHHTTSCTTSCEEEEC
T ss_pred             hHHHHHhhccccCcccEEeecc
Confidence            5555544    44566666653

>d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Haemophilus influenzae [TaxId: 727]

Probab=95.53  E-value=0.062  Score=36.79  Aligned_cols=73  Identities=14%  Similarity=0.209  Sum_probs=51.2

Q ss_pred             CCCCCEEEEECCChHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          178 NQPGKSLGVIGLGGLGHMA-VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~a-i~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      .+...++.++|.|++|..+ +++++..|.+|...|.........+++.|... ...++++.+    .++|+++-+.+-+
T Consensus         5 ~~~~~~ihfiGigG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~~~Gi~v-~~g~~~~~i----~~~d~vV~S~AI~   78 (96)
T d1p3da1           5 MRRVQQIHFIGIGGAGMSGIAEILLNEGYQISGSDIADGVVTQRLAQAGAKI-YIGHAEEHI----EGASVVVVSSAIK   78 (96)
T ss_dssp             CTTCCEEEEETTTSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHHHTTCEE-EESCCGGGG----TTCSEEEECTTSC
T ss_pred             chhCCEEEEEEECHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHHHCCCeE-EECCccccC----CCCCEEEECCCcC
Confidence            3567889999998888776 78889999999999987554333335778753 444444332    4688888766543

>d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Zymomonas mobilis [TaxId: 542]

Probab=95.47  E-value=0.14  Score=37.95  Aligned_cols=93  Identities=16%  Similarity=0.267  Sum_probs=66.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHC--CCeEEEEe--CCchhHHHHHHhCCCcEEEeCCCH--HHHHH--------------
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAF--GLNVTVLS--TSTSKKEEALSLLGADKFVVSSDL--EQMKA--------------  240 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~--~~~~~--------------  240 (344)
                      .++.|+|+ |.+|..++.+.+..  ..+|.++.  ++-+.+....++|....++..++.  ..+..              
T Consensus         3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~~~~~l~~~~~~~~~~v~~g~~   82 (150)
T d1r0ka2           3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPSLYNDLKEALAGSSVEAAAGAD   82 (150)
T ss_dssp             EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGGGHHHHHHHTTTCSSEEEESHH
T ss_pred             cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHHHHHHHHHHhhhcccccccCcc
Confidence            67899998 99999999999876  35776655  334455555578887776554432  11111              


Q ss_pred             ----h-cCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          241 ----L-GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       241 ----~-~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                          . ..++|+++.+..+...+.-.+.+++.+-++.+.
T Consensus        83 ~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA  121 (150)
T d1r0ka2          83 ALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA  121 (150)
T ss_dssp             HHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred             chheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence                1 246899999988777799999999999877554

>d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Carbonyl reductase sniffer
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.33  E-value=0.0098  Score=48.78  Aligned_cols=73  Identities=14%  Similarity=0.077  Sum_probs=47.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHH---HCCCeEEEEeCCchhHHHHH---HhCCCc--EEEeCCCHHHHH----H---h--cC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGK---AFGLNVTVLSTSTSKKEEAL---SLLGAD--KFVVSSDLEQMK----A---L--GK  243 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~---~~g~~V~~~~~~~~~~~~~~---~~~g~~--~~v~~~~~~~~~----~---~--~~  243 (344)
                      ++|||+|+ +++|++.++.+.   ..|++|++.++++++++.+.   +..+--  ..+|..+++.++    .   .  .+
T Consensus         3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~   82 (248)
T d1snya_           3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ   82 (248)
T ss_dssp             SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence            57999998 899999876553   35889999999988765542   222221  223444443222    1   1  25


Q ss_pred             CccEEEECCCC
Q 019199          244 SLDFIIDTASG  254 (344)
Q Consensus       244 ~~dvvid~~g~  254 (344)
                      ++|+++++.|.
T Consensus        83 ~iDiLvnNAg~   93 (248)
T d1snya_          83 GLNVLFNNAGI   93 (248)
T ss_dssp             CCSEEEECCCC
T ss_pred             CcceEEeeccc
Confidence            79999998774

>d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Erythromycin synthase, eryAI, 1st ketoreductase module
species: Saccharopolyspora erythraea [TaxId: 1836]

Probab=95.33  E-value=0.055  Score=44.23  Aligned_cols=78  Identities=26%  Similarity=0.328  Sum_probs=52.0

Q ss_pred             CCCCCCEEEEECC-ChHHHHHHHHHHHCCC-eEEEEeCCch---hHHHH---HHhCCCcEE---EeCCCHHHHHHh----
Q 019199          177 MNQPGKSLGVIGL-GGLGHMAVKFGKAFGL-NVTVLSTSTS---KKEEA---LSLLGADKF---VVSSDLEQMKAL----  241 (344)
Q Consensus       177 ~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~-~V~~~~~~~~---~~~~~---~~~~g~~~~---v~~~~~~~~~~~----  241 (344)
                      .++|+.++||+|+ +++|++.+..+...|+ +|+++.++..   ..+.+   .+..|....   .|-.+.+.+.++    
T Consensus         5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~~~g~~v~~~~~Dv~d~~~~~~~~~~i   84 (259)
T d2fr1a1           5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELEALGARTTVAACDVTDRESVRELLGGI   84 (259)
T ss_dssp             CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHTS
T ss_pred             ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHHhccccccccccccchHHHHHHhhccc
Confidence            4588999999997 9999999988888899 5777776532   22221   134565332   355565555443    


Q ss_pred             c--CCccEEEECCCC
Q 019199          242 G--KSLDFIIDTASG  254 (344)
Q Consensus       242 ~--~~~dvvid~~g~  254 (344)
                      .  .++|.++.+.|.
T Consensus        85 ~~~~~i~~vv~~ag~   99 (259)
T d2fr1a1          85 GDDVPLSAVFHAAAT   99 (259)
T ss_dssp             CTTSCEEEEEECCCC
T ss_pred             ccccccccccccccc
Confidence            1  468889988874

>d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: D-glycerate dehydrogenase
species: Hyphomicrobium methylovorum [TaxId: 84]

Probab=95.28  E-value=0.083  Score=41.17  Aligned_cols=116  Identities=17%  Similarity=0.262  Sum_probs=77.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-chh-
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DHP-  257 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~~-  257 (344)
                      .|.++.|+|.|.+|...+++++.+|.+|++.++........ ...+.   ....+.+   ++-...|+|..+..- +.+ 
T Consensus        46 ~g~tvgIiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~---~~~~~l~---~ll~~sD~v~l~~plt~~T~  118 (191)
T d1gdha1          46 DNKTLGIYGFGSIGQALAKRAQGFDMDIDYFDTHRASSSDE-ASYQA---TFHDSLD---SLLSVSQFFSLNAPSTPETR  118 (191)
T ss_dssp             TTCEEEEECCSHHHHHHHHHHHTTTCEEEEECSSCCCHHHH-HHHTC---EECSSHH---HHHHHCSEEEECCCCCTTTT
T ss_pred             cccceEEeecccchHHHHHHHHhhccccccccccccccchh-hcccc---cccCCHH---HHHhhCCeEEecCCCCchHh
Confidence            47999999999999999999999999999998765543333 12222   1122222   222347898776542 221 


Q ss_pred             ---HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEe
Q 019199          258 ---FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIP  315 (344)
Q Consensus       258 ---~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~  315 (344)
                         -...++.++++..+|.++-..-+             +-+.+++.+++|++.-. .++|.
T Consensus       119 ~li~~~~l~~mk~~a~lIN~sRG~iv-------------de~aL~~aL~~g~i~~a~lDV~~  167 (191)
T d1gdha1         119 YFFNKATIKSLPQGAIVVNTARGDLV-------------DNELVVAALEAGRLAYAGFDVFA  167 (191)
T ss_dssp             TCBSHHHHTTSCTTEEEEECSCGGGB-------------CHHHHHHHHHHTSEEEEEESCCT
T ss_pred             heecHHHhhCcCCccEEEecCCccch-------------hhHHHHHHHHcCCceEEEEECCC
Confidence               34788899999999888633211             24678899999998643 24443

>d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hydroxyisobutyrate dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=95.24  E-value=0.072  Score=40.22  Aligned_cols=86  Identities=14%  Similarity=0.167  Sum_probs=55.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYM  262 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~  262 (344)
                      +|-++|.|.+|...+.-+...|.+|++.+++.++.+.+ ...+....   ...   .+.....|+++-++......+.++
T Consensus         3 kIg~IGlG~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~-~~~~~~~~---~~~---~e~~~~~diii~~v~~~~~~~~v~   75 (162)
T d3cuma2           3 QIAFIGLGHMGAPMATNLLKAGYLLNVFDLVQSAVDGL-VAAGASAA---RSA---RDAVQGADVVISMLPASQHVEGLY   75 (162)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSSHHHHHHH-HHTTCEEC---SSH---HHHHTSCSEEEECCSCHHHHHHHH
T ss_pred             EEEEEEEHHHHHHHHHHHHHCCCeEEEEECchhhhhhh-hhhhcccc---chh---hhhccccCeeeecccchhhHHHHH
Confidence            57888999999988887777899999999999988877 46664321   111   122244677777666554444332


Q ss_pred             -------HhcccCCEEEEEc
Q 019199          263 -------SLLKVAGVYVLVG  275 (344)
Q Consensus       263 -------~~l~~~G~iv~~g  275 (344)
                             ..+.++-.+++++
T Consensus        76 ~~~~~~~~~l~~g~iiid~s   95 (162)
T d3cuma2          76 LDDDGLLAHIAPGTLVLECS   95 (162)
T ss_dssp             HSTTCHHHHSCTTCEEEECS
T ss_pred             hccccccccCCCCCEEEECC
Confidence                   2344455555443

>d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Aldehyde reductase II
species: Sporobolomyces salmonicolor [TaxId: 5005]

Probab=95.23  E-value=0.012  Score=50.50  Aligned_cols=79  Identities=18%  Similarity=0.030  Sum_probs=53.3

Q ss_pred             cCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh----CCC--cEEE--eCCCHHHHHHhcCCcc
Q 019199          176 KMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL----LGA--DKFV--VSSDLEQMKALGKSLD  246 (344)
Q Consensus       176 ~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~----~g~--~~~v--~~~~~~~~~~~~~~~d  246 (344)
                      ..+.+|++|||+|+ |-+|..++..+...|.+|++++++.++...+.+.    ...  ...+  |-.+...+.+...++|
T Consensus         6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~   85 (342)
T d1y1pa1           6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQGAYDEVIKGAA   85 (342)
T ss_dssp             CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTSTTTTTTTTTTCS
T ss_pred             CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHHHhhhccccccccEEEeccccchhhhhhhcccch
Confidence            34578999999998 9999999988888899999999887765544211    111  1122  2233333344446789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +++.+...
T Consensus        86 ~v~~~a~~   93 (342)
T d1y1pa1          86 GVAHIASV   93 (342)
T ss_dssp             EEEECCCC
T ss_pred             hhhhhccc
Confidence            99876654

>d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: TAT-interacting protein TIP30
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.21  E-value=0.0065  Score=49.31  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=49.9

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCcE-EEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADK-FVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~-~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      .+.+|||+|+ |.+|..+++.+...|.  +|+++++++.+...- ..-.... +.|..+.+.+.+...++|+++.+++..
T Consensus        13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~-~~~~i~~~~~D~~~~~~~~~~~~~~d~vi~~~~~~   91 (232)
T d2bkaa1          13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEE-AYKNVNQEVVDFEKLDDYASAFQGHDVGFCCLGTT   91 (232)
T ss_dssp             TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSG-GGGGCEEEECCGGGGGGGGGGGSSCSEEEECCCCC
T ss_pred             CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhccc-ccceeeeeeeccccccccccccccccccccccccc
Confidence            4578999998 9999999998877775  899999876543221 1111222 233334444444457899999998853

>d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=95.14  E-value=0.17  Score=38.62  Aligned_cols=94  Identities=18%  Similarity=0.232  Sum_probs=62.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CeEEEEe-CCch-hHHHHHHhCCCcEEEeCCC-HHHHHH-----------hcCCccE
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFG-LNVTVLS-TSTS-KKEEALSLLGADKFVVSSD-LEQMKA-----------LGKSLDF  247 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~-~~~~-~~~~~~~~~g~~~~v~~~~-~~~~~~-----------~~~~~dv  247 (344)
                      +|.|.|-|.+|...++.+.... .+++.+- ..+. ....+ .+++.+......+ ......           ...++|+
T Consensus         4 rIaINGfGRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~vDv   82 (172)
T d2czca2           4 KVGVNGYGTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRA-KELGIPVYAASEEFIPRFEKEGFEVAGTLNDLLEKVDI   82 (172)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHH-HHTTCCEEESSGGGHHHHHHHTCCCSCBHHHHHTTCSE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCceEEEEecCCChHHHHHh-hhcCceeecccccceeeecccCccccchhhhhhccCCE
Confidence            5889999999998888776554 3665544 3333 33344 4666554332222 111111           1258999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+||+|.-.+.+.+-..+..+-+.|..+..
T Consensus        83 ViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~  112 (172)
T d2czca2          83 IVDATPGGIGAKNKPLYEKAGVKAIFQGGE  112 (172)
T ss_dssp             EEECCSTTHHHHHHHHHHHHTCEEEECTTS
T ss_pred             EEECCCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999877788888999999999988765

>d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Formate dehydrogenase
species: Pseudomonas sp., strain 101 [TaxId: 306]

Probab=95.00  E-value=0.063  Score=41.74  Aligned_cols=116  Identities=9%  Similarity=0.045  Sum_probs=78.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC-ch-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG-DH-  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-~~-  256 (344)
                      -.+.++.|+|.|.+|...+++++.+|.+|...++........ +..+...   ..+   +.+.-...|+|.-+..- +. 
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~-~~~~~~~---~~~---l~~~l~~sD~v~~~~plt~~T  114 (188)
T d2naca1          42 LEAMHVGTVAAGRIGLAVLRRLAPFDVHLHYTDRHRLPESVE-KELNLTW---HAT---REDMYPVCDVVTLNCPLHPET  114 (188)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHGGGTCEEEEECSSCCCHHHH-HHHTCEE---CSS---HHHHGGGCSEEEECSCCCTTT
T ss_pred             ccccceeeccccccchhhhhhhhccCceEEEEeecccccccc-ccccccc---cCC---HHHHHHhccchhhcccccccc
Confidence            357899999999999999999999999999999765444333 3334221   222   22233568898775542 21 


Q ss_pred             ---hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEE
Q 019199          257 ---PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETI  314 (344)
Q Consensus       257 ---~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~  314 (344)
                         .-...++.++++..+|.++-..-.             +.+.+++++.+|++.-. .++|
T Consensus       115 ~~li~~~~l~~mk~ga~lIN~aRG~iv-------------d~~aL~~aL~~g~i~ga~lDV~  163 (188)
T d2naca1         115 EHMINDETLKLFKRGAYIVNTARGKLC-------------DRDAVARALESGRLAGYAGDVW  163 (188)
T ss_dssp             TTCBSHHHHTTSCTTEEEEECSCGGGB-------------CHHHHHHHHHTTSEEEEEESCC
T ss_pred             hhhhHHHHHHhCCCCCEEEecCchhhh-------------hHHHHHHHHhCCCceeEEEeCC
Confidence               235778888988888887533211             25678889999988642 2444

>d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TehB-like
domain: Putative methyltransferase TehB
species: Salmonella typhimurium [TaxId: 90371]

Probab=94.93  E-value=0.03  Score=43.87  Aligned_cols=98  Identities=20%  Similarity=0.245  Sum_probs=60.9

Q ss_pred             cCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCCc-EEEeCCCHHHHHHhcCCccEEEEC
Q 019199          176 KMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGAD-KFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       176 ~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      ..+++| +||-+|+| .|..+..+++ .|++|++++-+++.++.+.   +..+.+ ..+...+.... .....||+|+..
T Consensus        27 ~~~~~g-rvLDiGcG-~G~~~~~la~-~g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d~~~~-~~~~~fD~I~~~  102 (198)
T d2i6ga1          27 KVVAPG-RTLDLGCG-NGRNSLYLAA-NGYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVDLNTL-TFDGEYDFILST  102 (198)
T ss_dssp             TTSCSC-EEEEETCT-TSHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECCTTTC-CCCCCEEEEEEE
T ss_pred             ccCCCC-cEEEECCC-CCHHHHHHHH-HhhhhccccCcHHHHHHHHHHhhhccccchhhhheecccc-cccccccEEEEe
Confidence            333555 89999987 5777877776 5899999999988766552   233432 11221221110 013569998863


Q ss_pred             CC-----Cc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          252 AS-----GD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       252 ~g-----~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .-     .+   ..++.+.++|+|+|+++.....
T Consensus       103 ~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~~  136 (198)
T d2i6ga1         103 VVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAAM  136 (198)
T ss_dssp             SCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEEB
T ss_pred             eeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEec
Confidence            32     11   2467788889999999876443

>d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Sulfolobus solfataricus [TaxId: 2287]

Probab=94.92  E-value=0.11  Score=40.00  Aligned_cols=95  Identities=15%  Similarity=0.153  Sum_probs=60.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CeEEEEeC-CchhHHHHHHhCCCcEEEeCCCHHHHHH-----------hcCCccEEE
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFG-LNVTVLST-STSKKEEALSLLGADKFVVSSDLEQMKA-----------LGKSLDFII  249 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~-~~~~~~~~~~~~g~~~~v~~~~~~~~~~-----------~~~~~dvvi  249 (344)
                      +|.|.|-|.+|..+++.+.... .+++++.. .+..........+.......+......+           ...++|+|+
T Consensus         3 KVaINGfGRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~~~vDiVi   82 (178)
T d1b7go1           3 NVAVNGYGTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAHRRGIRIYVPQQSIKKFEESGIPVAGTVEDLIKTSDIVV   82 (178)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHHHTTCCEECCGGGHHHHHTTTCCCCCCHHHHHHHCSEEE
T ss_pred             EEEEECCCHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhcccCcceeccCccceeccccceecCCchhhhhhcCCEEE
Confidence            5789999999999999988764 47766543 3333333323445433322222211111           113689999


Q ss_pred             ECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          250 DTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       250 d~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ||+|.-.+.+.+-..++.+-+.+..+..
T Consensus        83 ecTG~f~~~e~a~~hl~~G~KvIi~~~~  110 (178)
T d1b7go1          83 DTTPNGVGAQYKPIYLQLQRNAIFQGGE  110 (178)
T ss_dssp             ECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             ECCCCcCCHHHHHHHHHcCCEEEEECCC
Confidence            9999876677788888877788777544

>d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: MurCD N-terminal domain
superfamily: MurCD N-terminal domain
family: MurCD N-terminal domain
domain: UDP-N-acetylmuramate-alanine ligase MurC
species: Thermotoga maritima [TaxId: 2336]

Probab=94.87  E-value=0.1  Score=35.11  Aligned_cols=69  Identities=22%  Similarity=0.310  Sum_probs=48.1

Q ss_pred             CEEEEECCChHHHHH-HHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCc
Q 019199          182 KSLGVIGLGGLGHMA-VKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       182 ~~vlI~Gag~~G~~a-i~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~  255 (344)
                      -++-++|.|++|..+ +++++..|++|...|..+...-..+++.|.... ..++.+.+    .++|+++-+..-+
T Consensus         2 ~~ihfiGIgG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~~~Gi~i~-~gh~~~~i----~~~d~vV~SsAI~   71 (89)
T d1j6ua1           2 MKIHFVGIGGIGMSAVALHEFSNGNDVYGSNIEETERTAYLRKLGIPIF-VPHSADNW----YDPDLVIKTPAVR   71 (89)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHHTTCCEE-SSCCTTSC----CCCSEEEECTTCC
T ss_pred             cEEEEEeECHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHHHCCCeEE-eeeccccc----CCCCEEEEecCcC
Confidence            357778988889754 688899999999999887654444578997643 33433322    4689888766533

>d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Trypanosoma cruzi [TaxId: 5693]

Probab=94.75  E-value=0.064  Score=43.84  Aligned_cols=72  Identities=15%  Similarity=0.126  Sum_probs=46.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhH-H----HHHHhCCCcEEEeC----CC---HHHHHH-------hc
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKK-E----EALSLLGADKFVVS----SD---LEQMKA-------LG  242 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~-~----~~~~~~g~~~~v~~----~~---~~~~~~-------~~  242 (344)
                      +.||+|+ +++|.+.+..+...|++|++++++.++. +    ++.+..+.......    .+   .+...+       .-
T Consensus         3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   82 (266)
T d1mxha_           3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSFRAF   82 (266)
T ss_dssp             EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHHHHH
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHHHhhcCCceEEEecccccchhHHHHHHHHHHHHHHHh
Confidence            4578888 8999999999999999999999886643 2    22223343333221    11   222211       12


Q ss_pred             CCccEEEECCCC
Q 019199          243 KSLDFIIDTASG  254 (344)
Q Consensus       243 ~~~dvvid~~g~  254 (344)
                      +++|+++++.|.
T Consensus        83 g~iDilvnnAG~   94 (266)
T d1mxha_          83 GRCDVLVNNASA   94 (266)
T ss_dssp             SCCCEEEECCCC
T ss_pred             CCCCEEEECCcc
Confidence            679999999883

>d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Shikimate 5-dehydrogenase AroE
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=94.73  E-value=0.029  Score=43.26  Aligned_cols=80  Identities=15%  Similarity=0.096  Sum_probs=51.1

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC----cE--EEeCCCHHHHHHhcCC
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA----DK--FVVSSDLEQMKALGKS  244 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~----~~--~v~~~~~~~~~~~~~~  244 (344)
                      +|.+...--.|.+|||+|+|+.+.+++..+...| +|+++.|+.++.+.+.+.+..    ..  .++..+   +......
T Consensus         8 ~l~~~~~~~~~k~vlIlGaGG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~~~~~~~~~~~~~~~~~---~~~~~~~   83 (177)
T d1nvta1           8 ALEEEIGRVKDKNIVIYGAGGAARAVAFELAKDN-NIIIANRTVEKAEALAKEIAEKLNKKFGEEVKFSG---LDVDLDG   83 (177)
T ss_dssp             HHHHHHCCCCSCEEEEECCSHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHHHHHHTCCHHHHEEEEC---TTCCCTT
T ss_pred             HHHHhCCCcCCCEEEEECCcHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHHHHhhchhhhhhhhhhh---hhhccch
Confidence            4444433367899999999999998887775555 899999999887766444431    00  000000   0111246


Q ss_pred             ccEEEECCCC
Q 019199          245 LDFIIDTASG  254 (344)
Q Consensus       245 ~dvvid~~g~  254 (344)
                      +|++++++..
T Consensus        84 ~dliIn~tp~   93 (177)
T d1nvta1          84 VDIIINATPI   93 (177)
T ss_dssp             CCEEEECSCT
T ss_pred             hhhhccCCcc
Confidence            8999998864

>d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose-3', 5'-epimerase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.70  E-value=0.023  Score=49.04  Aligned_cols=74  Identities=12%  Similarity=0.145  Sum_probs=50.9

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ..+-+|||+|+ |.+|..++..+...|.+|+++++........ ...... ...|..+.+.+.+...++|.|+.+.+
T Consensus        13 ~~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~~~-~~~~~~~~~~D~~~~~~~~~~~~~~d~Vih~a~   88 (363)
T d2c5aa1          13 SENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTE-DMFCDEFHLVDLRVMENCLKVTEGVDHVFNLAA   88 (363)
T ss_dssp             TSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCG-GGTCSEEEECCTTSHHHHHHHHTTCSEEEECCC
T ss_pred             CCCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccchhh-hcccCcEEEeechhHHHHHHHhhcCCeEeeccc
Confidence            35788999997 9999999999999999999998654432111 111111 22344555555555578999998774

>d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Sheep (Ovis orientalis aries) [TaxId: 9940]

Probab=94.68  E-value=0.21  Score=37.98  Aligned_cols=92  Identities=22%  Similarity=0.278  Sum_probs=58.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCCchh---
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASGDHP---  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~~~~---  257 (344)
                      +|-++|.|.+|...+.-+...|.+|++.++++++.+.+. +.++.  ........+...+.....|.++-++.....   
T Consensus         4 nIg~IGlG~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~~~~~~a~~~~~~~~~~~~~~~ii~~~~~~~~v~~   82 (176)
T d2pgda2           4 DIALIGLAVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEAKGTKVLGAHSLEEMVSKLKKPRRIILLVKAGQAVDN   82 (176)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTTTTSSCEECSSHHHHHHHBCSSCEEEECSCTTHHHHH
T ss_pred             cEEEEeEhHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HhccccccccchhhhhhhhhhhcccceEEEecCchHHHHH
Confidence            477899999999988888888999999999999988874 33321  111122333333444556666666654332   


Q ss_pred             -HHHHHHhcccCCEEEEEc
Q 019199          258 -FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 -~~~~~~~l~~~G~iv~~g  275 (344)
                       ...+...++++-.++.++
T Consensus        83 v~~~l~~~~~~g~iiid~s  101 (176)
T d2pgda2          83 FIEKLVPLLDIGDIIIDGG  101 (176)
T ss_dssp             HHHHHHHHCCTTCEEEECS
T ss_pred             HHHHHHhccccCcEEEecC
Confidence             233444455555555554

>d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Prephenate dehydrogenase TyrA
species: Haemophilus influenzae [TaxId: 727]

Probab=94.61  E-value=0.55  Score=34.44  Aligned_cols=91  Identities=21%  Similarity=0.261  Sum_probs=59.2

Q ss_pred             CEEEEEC-CChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHH----HHHh---cCCccEEEECCC
Q 019199          182 KSLGVIG-LGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQ----MKAL---GKSLDFIIDTAS  253 (344)
Q Consensus       182 ~~vlI~G-ag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~----~~~~---~~~~dvvid~~g  253 (344)
                      .+|.|+| .|.+|...+..++..|..|.+.+++.+..... ..-+++.++.......    +.+.   ...=.+++|+.+
T Consensus        10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~-~~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S   88 (152)
T d2pv7a2          10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAES-ILANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS   88 (152)
T ss_dssp             CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHH-HHTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred             CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccch-hhhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence            5789999 69999999999999999999999988766555 3456777666544322    2222   123357888877


Q ss_pred             CchhHHHHHHhcccCCEEEEE
Q 019199          254 GDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ........+....+ .+++..
T Consensus        89 vk~~~~~~~~~~~~-~~~v~~  108 (152)
T d2pv7a2          89 VKREPLAKMLEVHT-GAVLGL  108 (152)
T ss_dssp             CCHHHHHHHHHHCS-SEEEEE
T ss_pred             cCHHHHHHHHHHcc-CCEEEe
Confidence            54333344433333 355543

>d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Catalytic, N-terminal domain of histone methyltransferase Dot1l
domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.60  E-value=0.11  Score=44.18  Aligned_cols=100  Identities=12%  Similarity=0.080  Sum_probs=63.4

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHh----------CC----CcEEEeC--CCHH
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSL----------LG----ADKFVVS--SDLE  236 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~----------~g----~~~~v~~--~~~~  236 (344)
                      +...++++++||-+|+| .|..+.++|+..++ ++++++-+++..+.+.+.          +|    .-..+..  .+..
T Consensus       145 ~~~~l~~~~~vlD~GcG-~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~~~~  223 (328)
T d1nw3a_         145 DEIKMTDDDLFVDLGSG-VGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFLSEE  223 (328)
T ss_dssp             HHSCCCTTCEEEEETCT-TSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTTSHH
T ss_pred             HHcCCCCCCEEEEcCCC-CCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECcccccc
Confidence            44445999999999987 48888999999988 799999998765554211          12    1122222  2222


Q ss_pred             HHHHhcCCccEEEE-CCCCc----hhHHHHHHhcccCCEEEEEc
Q 019199          237 QMKALGKSLDFIID-TASGD----HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       237 ~~~~~~~~~dvvid-~~g~~----~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ..... ..+|+++- +.-..    ..+.+..+.|+|||++|..-
T Consensus       224 ~~~~~-~~advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~  266 (328)
T d1nw3a_         224 WRERI-ANTSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK  266 (328)
T ss_dssp             HHHHH-HHCSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred             ccccc-CcceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence            22222 23678774 22221    23566778899999998763

>d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 3, PRMT3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.56  E-value=0.051  Score=45.90  Aligned_cols=99  Identities=16%  Similarity=0.149  Sum_probs=55.6

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH--HHhCCC--c-EEEeCCCHHHHHHhcCC
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA--LSLLGA--D-KFVVSSDLEQMKALGKS  244 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~--~~~~g~--~-~~v~~~~~~~~~~~~~~  244 (344)
                      ++.+.....+|++||.+|+| .|..++.+|+ .|+ +|++++.++.-....  .++.+.  . .++..+ ...+......
T Consensus        26 ai~~~~~~~~~~~VLDiGcG-~G~lsl~aa~-~Ga~~V~aid~s~~~~~a~~~~~~~~~~~~i~~~~~~-~~~l~~~~~~  102 (311)
T d2fyta1          26 FIYQNPHIFKDKVVLDVGCG-TGILSMFAAK-AGAKKVLGVDQSEILYQAMDIIRLNKLEDTITLIKGK-IEEVHLPVEK  102 (311)
T ss_dssp             HHHHCGGGTTTCEEEEETCT-TSHHHHHHHH-TTCSEEEEEESSTHHHHHHHHHHHTTCTTTEEEEESC-TTTSCCSCSC
T ss_pred             HHHhccccCCcCEEEEECCC-CCHHHHHHHH-cCCCEEEEEeCHHHHHHHHHHHHHhCCCccceEEEee-HHHhcCcccc
Confidence            45554455789999999987 4666666666 476 899999887532211  123332  1 222222 1111111257


Q ss_pred             ccEEEEC-CC----CchhHHHH----HHhcccCCEEE
Q 019199          245 LDFIIDT-AS----GDHPFDAY----MSLLKVAGVYV  272 (344)
Q Consensus       245 ~dvvid~-~g----~~~~~~~~----~~~l~~~G~iv  272 (344)
                      +|+|+.. .+    ....+..+    -+.|+|+|+++
T Consensus       103 ~D~Ivse~~~~~~~~e~~~~~~~~a~~~~Lkp~G~ii  139 (311)
T d2fyta1         103 VDVIISEWMGYFLLFESMLDSVLYAKNKYLAKGGSVY  139 (311)
T ss_dssp             EEEEEECCCBTTBTTTCHHHHHHHHHHHHEEEEEEEE
T ss_pred             ceEEEEeeeeeecccccccHHHHHHHHhcCCCCcEEe
Confidence            9999752 22    12213333    24689999987

>d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: CAC2371-like
domain: Putative methyltransferase CAC2371
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=94.52  E-value=0.03  Score=45.50  Aligned_cols=92  Identities=17%  Similarity=0.190  Sum_probs=59.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCcEEEeCCCHHHHHHhcCCccEEEECCCC-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGADKFVVSSDLEQMKALGKSLDFIIDTASG-  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~-  254 (344)
                      .++.+||-+|+|+ |..+..+++ .|.+|++++.+++.++.+++.   .|...-+...+.... ...+.+|+|+...+. 
T Consensus        36 ~~~~~vLDiGCG~-G~~~~~l~~-~g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~d~~~~-~~~~~fD~i~~~~~~~  112 (246)
T d1y8ca_          36 LVFDDYLDLACGT-GNLTENLCP-KFKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQDISNL-NINRKFDLITCCLDST  112 (246)
T ss_dssp             CCTTEEEEETCTT-STTHHHHGG-GSSEEEEECSCHHHHHHHHHHHHHTTCCCEEECCCGGGC-CCSCCEEEEEECTTGG
T ss_pred             CCCCeEEEEeCcC-CHHHHHHHH-hCCccEeeccchhhhhhccccccccCccceeeccchhhh-cccccccccceeeeee
Confidence            4567899999863 666666666 578999999999877766443   332222222222111 123679999864321 


Q ss_pred             -----c----hhHHHHHHhcccCCEEEE
Q 019199          255 -----D----HPFDAYMSLLKVAGVYVL  273 (344)
Q Consensus       255 -----~----~~~~~~~~~l~~~G~iv~  273 (344)
                           .    ..++.+.+.|+|+|.++.
T Consensus       113 ~~~~~~~~~~~~l~~~~~~LkpgG~~i~  140 (246)
T d1y8ca_         113 NYIIDSDDLKKYFKAVSNHLKEGGVFIF  140 (246)
T ss_dssp             GGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred             eccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence                 1    136778888999999874

>d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Pinoresinol-lariciresinol reductase
species: Giant arborvitae (Thuja plicata) [TaxId: 3316]

Probab=94.47  E-value=0.079  Score=43.93  Aligned_cols=73  Identities=21%  Similarity=0.245  Sum_probs=50.4

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-----hHHHH--HHhCCCcEE-EeCCCHHHHHHhcCCccEEEEC
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-----KKEEA--LSLLGADKF-VVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-----~~~~~--~~~~g~~~~-v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      -.+|||+|+ |.+|..++..+...|.+|++++++..     +...+  .+..+.+.+ .|..+.+.+.+...+.+.++.+
T Consensus         3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~~~~~~~~~~~~v~~v~~d~~d~~~~~~~~~~~~~~~~~   82 (312)
T d1qyda_           3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDHQRLVDALKQVDVVISA   82 (312)
T ss_dssp             CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCHHHHHHHHTTCSEEEEC
T ss_pred             CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCcccchhHHHHHhhhccCCcEEEEeecccchhhhhhccCcchhhhh
Confidence            356999998 99999999999889999999988643     11111  123344433 2445666666666778888887


Q ss_pred             CC
Q 019199          252 AS  253 (344)
Q Consensus       252 ~g  253 (344)
                      .+
T Consensus        83 ~~   84 (312)
T d1qyda_          83 LA   84 (312)
T ss_dssp             CC
T ss_pred             hh
Confidence            65

>d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Probable oxidoreductase At4g09670
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=94.37  E-value=0.19  Score=38.52  Aligned_cols=112  Identities=12%  Similarity=0.153  Sum_probs=71.1

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCeEEEE-eCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF-GLNVTVL-STSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~-g~~V~~~-~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      ++.|+|+|.+|...+...+.. +.+++++ +.++++.+.+.++++.   ..+  +++.+.+-+ ...+|+|+-++....-
T Consensus         3 ki~iIG~G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~--~~~~~~ll~-~~~iD~v~I~tp~~~h   79 (184)
T d1ydwa1           3 RIGVMGCADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKI--HGSYESLLE-DPEIDALYVPLPTSLH   79 (184)
T ss_dssp             EEEEESCCTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEE--ESSHHHHHH-CTTCCEEEECCCGGGH
T ss_pred             EEEEEcCCHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceee--cCcHHHhhh-ccccceeeecccchhh
Confidence            478899999999888888776 5677754 5666666666677773   222  233333222 2569999999887766


Q ss_pred             HHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCc
Q 019199          258 FDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIY  308 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  308 (344)
                      ...+..+++.+ +-+.+.-+..          ...++.++++++.++....
T Consensus        80 ~~~~~~~l~~g-~~v~~EKP~~----------~~~~e~~~l~~~~~~~~~~  119 (184)
T d1ydwa1          80 VEWAIKAAEKG-KHILLEKPVA----------MNVTEFDKIVDACEANGVQ  119 (184)
T ss_dssp             HHHHHHHHTTT-CEEEECSSCS----------SSHHHHHHHHHHHHTTTCC
T ss_pred             cchhhhhhhcc-ceeecccccc----------cCHHHHHHHHHHHHhhCCE
Confidence            88888888865 4555643311          1233455666666555443

>d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 2
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=94.30  E-value=0.02  Score=44.46  Aligned_cols=36  Identities=14%  Similarity=0.309  Sum_probs=31.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCch
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS  215 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~  215 (344)
                      .+++|+|+|+|..|+.++..++..|. .|+++++.+.
T Consensus         3 ~~~kVaIIGaGpaGl~aA~~l~~~G~~~V~v~E~~~~   39 (196)
T d1gtea4           3 YSAKIALLGAGPASISCASFLARLGYSDITIFEKQEY   39 (196)
T ss_dssp             GGCCEEEECCSHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred             CCCEEEEECChHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence            35789999999999999999999999 5999987754

>d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Bacillus subtilis [TaxId: 1423]

Probab=94.26  E-value=0.11  Score=42.99  Aligned_cols=95  Identities=18%  Similarity=0.233  Sum_probs=65.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC----CC-----cEEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL----GA-----DKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~----g~-----~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ...++|||+|.|. |..+..+++..+. +|.+++-+++-.+.+.+-+    ++     -.++..+....+++..+++|++
T Consensus        74 ~~p~~vLiiGgG~-G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~~~~~~~~~~~~d~r~~i~~~D~~~~l~~~~~~yDvI  152 (274)
T d1iy9a_          74 PNPEHVLVVGGGD-GGVIREILKHPSVKKATLVDIDGKVIEYSKKFLPSIAGKLDDPRVDVQVDDGFMHIAKSENQYDVI  152 (274)
T ss_dssp             SSCCEEEEESCTT-CHHHHHHTTCTTCSEEEEEESCHHHHHHHHHHCHHHHTTTTSTTEEEEESCSHHHHHTCCSCEEEE
T ss_pred             CCcceEEecCCCC-cHHHHHHHhcCCcceEEEecCCHHHHHHHHHhChhhcccccCCCeEEEechHHHHHhhcCCCCCEE
Confidence            3457899998643 5566677777665 8999998888777774434    21     2345555556676666789998


Q ss_pred             E-ECCC---------CchhHHHHHHhcccCCEEEEE
Q 019199          249 I-DTAS---------GDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       249 i-d~~g---------~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      + |...         +..-++.+.+.|+++|.++.=
T Consensus       153 i~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q  188 (274)
T d1iy9a_         153 MVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ  188 (274)
T ss_dssp             EESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred             EEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence            6 4322         223378888999999999865

>d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: mRNA cap (Guanine N-7) methyltransferase
domain: mRNA cap (Guanine N-7) methyltransferase
species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]

Probab=94.22  E-value=0.038  Score=45.10  Aligned_cols=96  Identities=19%  Similarity=0.160  Sum_probs=60.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHh---CCCc-EE-EeCCCHHHH-HHhcCCccEEEEC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSL---LGAD-KF-VVSSDLEQM-KALGKSLDFIIDT  251 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~---~g~~-~~-v~~~~~~~~-~~~~~~~dvvid~  251 (344)
                      ++++++||-+|+|. |..+..+++.-..+|++++.+++.++.+.+.   .+.. .+ +...+.... ....+.+|+|+..
T Consensus        22 ~~~~~~VLDlGCG~-G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~D~~~~~~~~~~~fD~V~~~  100 (252)
T d1ri5a_          22 TKRGDSVLDLGCGK-GGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQDSYGRHMDLGKEFDVISSQ  100 (252)
T ss_dssp             CCTTCEEEEETCTT-TTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEESCTTTSCCCCSSCEEEEEEE
T ss_pred             CCCcCEEEEecccC-cHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEcchhhhcccccccceEEEEc
Confidence            37899999999875 5566777776445899999999988777533   2321 11 111111000 0113569999764


Q ss_pred             CCCc----------hhHHHHHHhcccCCEEEEE
Q 019199          252 ASGD----------HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       252 ~g~~----------~~~~~~~~~l~~~G~iv~~  274 (344)
                      ..-.          ..+..+.+.|+|+|+++..
T Consensus       101 ~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~  133 (252)
T d1ri5a_         101 FSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT  133 (252)
T ss_dssp             SCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred             ceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence            4321          2356677889999998864

>d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Formate/glycerate dehydrogenases, NAD-domain
domain: Phosphoglycerate dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=94.20  E-value=0.27  Score=37.89  Aligned_cols=115  Identities=20%  Similarity=0.235  Sum_probs=75.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC-Cch-
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS-GDH-  256 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g-~~~-  256 (344)
                      -.+.+|.|+|.|.+|...+++++.+|.+|+..++......     ...   ......+   ++-...|++.-+.. ++. 
T Consensus        42 l~~~~vgiiG~G~IG~~va~~l~~fg~~v~~~d~~~~~~~-----~~~---~~~~~l~---ell~~sDii~i~~plt~~T  110 (188)
T d1sc6a1          42 ARGKKLGIIGYGHIGTQLGILAESLGMYVYFYDIENKLPL-----GNA---TQVQHLS---DLLNMSDVVSLHVPENPST  110 (188)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCCCCC-----TTC---EECSCHH---HHHHHCSEEEECCCSSTTT
T ss_pred             ccceEEEEeecccchhhhhhhcccccceEeeccccccchh-----hhh---hhhhhHH---HHHhhccceeecccCCcch
Confidence            3678999999999999999999999999999987543211     111   1122222   22234788887665 221 


Q ss_pred             ---hHHHHHHhcccCCEEEEEcCCCccccCCceeeeechHhHHHHHHHHHhCCCccc-eEEEeCc
Q 019199          257 ---PFDAYMSLLKVAGVYVLVGFPSKVKFSPASLNIGGTKDTQEMLEYCAAHKIYPQ-IETIPIE  317 (344)
Q Consensus       257 ---~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~~  317 (344)
                         .-.+.++.++++..+|.++-..-+             +.+.+++++.++++... .++|+-|
T Consensus       111 ~~li~~~~l~~mk~~a~lIN~aRG~lv-------------de~aL~~aL~~~~~~~a~lDV~~~E  162 (188)
T d1sc6a1         111 KNMMGAKEISLMKPGSLLINASRGTVV-------------DIPALADALASKHLAGAAIDVFPTE  162 (188)
T ss_dssp             TTCBCHHHHHHSCTTEEEEECSCSSSB-------------CHHHHHHHHHTTSEEEEEEEC----
T ss_pred             hhhccHHHHhhCCCCCEEEEcCcHHhh-------------hhHHHHHHHHcCCceEEEEecCCCC
Confidence               235788899999999888644222             25678888999988754 3666554

>d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase
species: Xanthobacter sp., py2 [TaxId: 35809]

Probab=94.13  E-value=0.071  Score=37.95  Aligned_cols=38  Identities=21%  Similarity=0.205  Sum_probs=34.2

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      ..++.+++|+|+|.+|.=.+..++.+|.+|+++.+.+.
T Consensus        19 ~~~~~~vvVvGgG~ig~E~A~~l~~~g~~vt~i~~~~~   56 (121)
T d1mo9a2          19 YEPGSTVVVVGGSKTAVEYGCFFNATGRRTVMLVRTEP   56 (121)
T ss_dssp             SCCCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSCT
T ss_pred             hCCCCEEEEECCCHHHHHHHHHHHhcchhheEeeccch
Confidence            37889999999999999999999999999999998754

>d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: PreATP-grasp domain
superfamily: PreATP-grasp domain
family: BC N-terminal domain-like
domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain
species: Escherichia coli [TaxId: 562]

Probab=94.06  E-value=0.023  Score=37.31  Aligned_cols=36  Identities=28%  Similarity=0.451  Sum_probs=31.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKK  217 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~  217 (344)
                      ++|.|+|+|.+|.+.++-++.+|.++.+.+..++..
T Consensus         2 k~vgIlG~GQLgrMl~~Aa~~LG~~v~vldp~~~~p   37 (78)
T d3etja2           2 KQVCVLGNGQLGRMLRQAGEPLGIAVWPVGLDAEPA   37 (78)
T ss_dssp             EEEEEEBCSHHHHHHHHHHGGGTEEEEEECTTSCGG
T ss_pred             CEEEEEcCCHHHHHHHHHHHHcCCEEEEEcCCCCCc
Confidence            368899999999999999999999999999776543

>d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Potassium channel NAD-binding domain
domain: Potassium channel-related protein MthK
species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]

Probab=94.05  E-value=0.24  Score=35.46  Aligned_cols=90  Identities=10%  Similarity=0.062  Sum_probs=63.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEE-eCCCHHHHHHhc-CCccEEEECCCCch---h
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFV-VSSDLEQMKALG-KSLDFIIDTASGDH---P  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~~~~~~~~-~~~dvvid~~g~~~---~  257 (344)
                      .++|.|.|.+|+.++..++  +.+|.+++.++++.+.+ +..|...+. |..+++.+.+.. ..++.++-+.....   .
T Consensus         2 HivI~G~g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~-~~~~~~~i~Gd~~~~~~L~~a~i~~A~~vi~~~~~d~~n~~   78 (129)
T d2fy8a1           2 HVVICGWSESTLECLRELR--GSEVFVLAEDENVRKKV-LRSGANFVHGDPTRVSDLEKANVRGARAVIVNLESDSETIH   78 (129)
T ss_dssp             CEEEESCCHHHHHHHHTSC--GGGEEEEESCTTHHHHH-HHTTCEEEESCTTSHHHHHHTTCTTCSEEEECCSSHHHHHH
T ss_pred             EEEEECCCHHHHHHHHHHc--CCCCEEEEcchHHHHHH-HhcCccccccccCCHHHHHHhhhhcCcEEEEeccchhhhHH
Confidence            4788899999998887764  55788889888888877 566765433 445667777764 77899988777543   1


Q ss_pred             HHHHHHhcccCCEEEEEc
Q 019199          258 FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g  275 (344)
                      .....+.+.|..+++..-
T Consensus        79 ~~~~~r~~~~~~~iia~~   96 (129)
T d2fy8a1          79 CILGIRKIDESVRIIAEA   96 (129)
T ss_dssp             HHHHHHHHCSSSCEEEEC
T ss_pred             HHHHHHHHCCCceEEEEE
Confidence            334455667777766664

>d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810)
species: Leishmania major [TaxId: 5664]

Probab=94.01  E-value=0.075  Score=43.42  Aligned_cols=96  Identities=15%  Similarity=0.072  Sum_probs=64.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeC--CCHHHHHHhcCCccEEEECCCC--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVS--SDLEQMKALGKSLDFIIDTASG--  254 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~--~~~~~~~~~~~~~dvvid~~g~--  254 (344)
                      .++.+||=+|+|. |..+..+++....+|++++.+++-++.+++.+.....++.  .+...+....+.||+|+..-.-  
T Consensus        92 ~~~~~vLD~GcG~-G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~d~~~~~~~~~~fD~I~~~~vl~h  170 (254)
T d1xtpa_          92 HGTSRALDCGAGI-GRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILASMETATLPPNTYDLIVIQWTAIY  170 (254)
T ss_dssp             CCCSEEEEETCTT-THHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEESCGGGCCCCSSCEEEEEEESCGGG
T ss_pred             CCCCeEEEecccC-ChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEccccccccCCCccceEEeeccccc
Confidence            6778899999874 7778888876666899999999988888666653222221  1211111113569999764321  


Q ss_pred             ---c---hhHHHHHHhcccCCEEEEEc
Q 019199          255 ---D---HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       255 ---~---~~~~~~~~~l~~~G~iv~~g  275 (344)
                         +   ..++.+.+.|+|+|+++...
T Consensus       171 l~d~d~~~~l~~~~~~LkpgG~iii~e  197 (254)
T d1xtpa_         171 LTDADFVKFFKHCQQALTPNGYIFFKE  197 (254)
T ss_dssp             SCHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred             cchhhhHHHHHHHHHhcCCCcEEEEEe
Confidence               1   23677888899999998754

>d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: AD-003 protein-like
domain: Adrenal gland protein AD-003 (C9orf32)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.99  E-value=0.04  Score=44.00  Aligned_cols=98  Identities=14%  Similarity=0.084  Sum_probs=63.8

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---cE-EEeCCCHHHHHHhcCCccEEEECCC
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---DK-FVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---~~-~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      ..++.+||-+|+|. |..+..+++..+.+|++++-+++-++.+++.+..   .. -+...+...+....+.+|+|+....
T Consensus        58 ~~~~~~vLDiGcG~-G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~d~~~~~~~~~~fD~I~~~~~  136 (222)
T d2ex4a1          58 KTGTSCALDCGAGI-GRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCCGLQDFTPEPDSYDVIWIQWV  136 (222)
T ss_dssp             CCCCSEEEEETCTT-THHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEECCGGGCCCCSSCEEEEEEESC
T ss_pred             CCCCCEEEEeccCC-CHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccccccccccccccccccccccc
Confidence            36778899999864 7777777766677999999999988888554431   11 1111121111112357899976332


Q ss_pred             -----Cc---hhHHHHHHhcccCCEEEEEcC
Q 019199          254 -----GD---HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       254 -----~~---~~~~~~~~~l~~~G~iv~~g~  276 (344)
                           .+   ..+..+.+.|+|+|.++....
T Consensus       137 l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~  167 (222)
T d2ex4a1         137 IGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN  167 (222)
T ss_dssp             GGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             cccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence                 12   247778889999999987743

>d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: 2,4-dienoyl-CoA reductase, middle domain
species: Escherichia coli [TaxId: 562]

Probab=93.98  E-value=0.039  Score=42.64  Aligned_cols=37  Identities=27%  Similarity=0.318  Sum_probs=33.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      ..+.+|+|+|+|+.|+.++..+...|.+|++++..++
T Consensus        41 ~~~k~V~IIGaGPAGL~AA~~la~~G~~Vtl~E~~~~   77 (179)
T d1ps9a3          41 VQKKNLAVVGAGPAGLAFAINAAARGHQVTLFDAHSE   77 (179)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCCcEEEEECccHHHHHHHHHHHhhccceEEEeccCc
Confidence            5568899999999999999999999999999997653

>d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Dihydroxypyridine hydroxylase DhpH
species: Arthrobacter nicotinovorans [TaxId: 29320]

Probab=93.95  E-value=0.036  Score=45.12  Aligned_cols=35  Identities=23%  Similarity=0.255  Sum_probs=31.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      ..++|+|+|+|..|++++..++..|.+|+++++++
T Consensus         3 ~~~kV~IiGaG~aGl~~A~~L~~~G~~v~v~Er~~   37 (265)
T d2voua1           3 TTDRIAVVGGSISGLTAALMLRDAGVDVDVYERSP   37 (265)
T ss_dssp             CCSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCcEEEECcCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            35789999999999999999999999999999754

>d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Short chain L-3-hydroxyacyl CoA dehydrogenase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.92  E-value=0.059  Score=42.08  Aligned_cols=39  Identities=23%  Similarity=0.296  Sum_probs=34.5

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA  220 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~  220 (344)
                      ++|.|+|+|.+|...++++...|.+|++.+.+++.++.+
T Consensus         5 kkvaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a   43 (192)
T d1f0ya2           5 KHVTVIGGGLMGAGIAQVAAATGHTVVLVDQTEDILAKS   43 (192)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCEEEEECSCHHHHHHH
T ss_pred             EEEEEECcCHHHHHHHHHHHhCCCcEEEEECChHHHHHH
Confidence            478999999999999999999999999999998866544

>d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein PH1915, middle and C-terminal domains
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=93.92  E-value=0.13  Score=43.58  Aligned_cols=99  Identities=26%  Similarity=0.292  Sum_probs=62.4

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHH---hCCCc---EEEeCCCHHHHHH---hcCCccE
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALS---LLGAD---KFVVSSDLEQMKA---LGKSLDF  247 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~---~~g~~---~~v~~~~~~~~~~---~~~~~dv  247 (344)
                      +++|++||=.++|. |..++.+++. |+ +|+.++.+++..+.+.+   ..|..   ..+..+..+.+..   ..+.||+
T Consensus       143 ~~~g~~VLDl~~g~-G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~d~~~~~~~~~~~~~~fD~  220 (324)
T d2as0a2         143 VQPGDRVLDVFTYT-GGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVGSAFEEMEKLQKKGEKFDI  220 (324)
T ss_dssp             CCTTCEEEETTCTT-THHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHTTCCEEE
T ss_pred             cCCCCeeecccCcc-cchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeechhhhhhHHHHhccCCCCc
Confidence            47899999987643 3344445543 66 89999999987666532   34431   3333333344333   3467999


Q ss_pred             EEECCC-C--------------chhHHHHHHhcccCCEEEEEcCCC
Q 019199          248 IIDTAS-G--------------DHPFDAYMSLLKVAGVYVLVGFPS  278 (344)
Q Consensus       248 vid~~g-~--------------~~~~~~~~~~l~~~G~iv~~g~~~  278 (344)
                      |+--.. .              ...+..+++.|+|+|+++.+..+.
T Consensus       221 Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~s~  266 (324)
T d2as0a2         221 VVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSCSQ  266 (324)
T ss_dssp             EEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEECCT
T ss_pred             hhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeCCc
Confidence            874222 1              113567788999999999886553

>d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-glucuronate decarboxylase 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.90  E-value=0.0083  Score=50.97  Aligned_cols=68  Identities=21%  Similarity=0.118  Sum_probs=43.4

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-hHHHHHHhCC-C--cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-KKEEALSLLG-A--DKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-~~~~~~~~~g-~--~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .+|||+|+ |.+|..++..+...|.+|+++++... +.+.. ...- .  -.+.+..   .+.....++|+||.+++
T Consensus         2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~~~~~~~~~~-~~~~~~~~~d~~~~~---~~~~~~~~~d~VihlAa   74 (312)
T d2b69a1           2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDNFFTGRKRNV-EHWIGHENFELINHD---VVEPLYIEVDQIYHLAS   74 (312)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGT-GGGTTCTTEEEEECC---TTSCCCCCCSEEEECCS
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCCcCCHHHH-HHhcCCCceEEEehH---HHHHHHcCCCEEEECcc
Confidence            57999998 99999999999889999999875322 22222 1211 1  1223322   22223357999998775

>d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-glucose-4,6-dehydratase
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.85  E-value=0.087  Score=44.88  Aligned_cols=75  Identities=16%  Similarity=0.095  Sum_probs=51.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC----CCcEE-EeCCCHHHHHHhc--CCccEEEEC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL----GADKF-VVSSDLEQMKALG--KSLDFIIDT  251 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~----g~~~~-v~~~~~~~~~~~~--~~~dvvid~  251 (344)
                      .|.+|||+|+ |.+|..+++.+...|.+|+++++...+...+.+..    +...+ .|-.+.+.+.+..  ..+|+++.+
T Consensus         7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~~~l~~~~~~~~~~~v~~~   86 (356)
T d1rkxa_           7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREFQPEIVFHM   86 (356)
T ss_dssp             TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccChHhhhhhhhhchhhhhhhh
Confidence            4689999998 99999999999999999999998765432221221    12222 2444566555543  457899887


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      ++.
T Consensus        87 aa~   89 (356)
T d1rkxa_          87 AAQ   89 (356)
T ss_dssp             CSC
T ss_pred             hcc
Confidence            774

>d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Tobacco (Nicotiana tabacum) [TaxId: 4097]

Probab=93.83  E-value=0.032  Score=46.20  Aligned_cols=34  Identities=41%  Similarity=0.436  Sum_probs=30.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +++|+|+|+|..|++++..++..|.+|++++.++
T Consensus         1 ~KkV~IIGaG~aGL~aA~~La~~G~~V~vlE~~~   34 (373)
T d1seza1           1 AKRVAVIGAGVSGLAAAYKLKIHGLNVTVFEAEG   34 (373)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred             CCEEEEECcCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            5789999999999999999999999999998653

>d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative oxidoreductase VCA1048
species: Vibrio cholerae [TaxId: 666]

Probab=93.77  E-value=0.16  Score=38.29  Aligned_cols=89  Identities=10%  Similarity=0.134  Sum_probs=60.5

Q ss_pred             EEEEECCChHHHH-HHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          183 SLGVIGLGGLGHM-AVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       183 ~vlI~Gag~~G~~-ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      ++.|+|+|.+|.. .+...+.. +..+.++++++++.+.+.++++....++..+ +.+   ..++|+|+-++....-...
T Consensus         3 rvgiiG~G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~-~ll---~~~iD~V~I~tp~~~H~~~   78 (167)
T d1xeaa1           3 KIAMIGLGDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCTDYR-DVL---QYGVDAVMIHAATDVHSTL   78 (167)
T ss_dssp             EEEEECCCHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCSSTT-GGG---GGCCSEEEECSCGGGHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccccHH-Hhc---ccccceecccccccccccc
Confidence            5788999999864 45555555 4577888888888888877888654432211 122   2468999988887665777


Q ss_pred             HHHhcccCCEEEEEcC
Q 019199          261 YMSLLKVAGVYVLVGF  276 (344)
Q Consensus       261 ~~~~l~~~G~iv~~g~  276 (344)
                      +..+++.+ +-+.+.-
T Consensus        79 ~~~al~~g-k~V~~EK   93 (167)
T d1xeaa1          79 AAFFLHLG-IPTFVDK   93 (167)
T ss_dssp             HHHHHHTT-CCEEEES
T ss_pred             cccccccc-cccccCC
Confidence            88888765 4455543

>d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO)
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=93.68  E-value=0.056  Score=41.63  Aligned_cols=42  Identities=21%  Similarity=0.246  Sum_probs=35.7

Q ss_pred             EEEEE-CCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhC
Q 019199          183 SLGVI-GLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLL  224 (344)
Q Consensus       183 ~vlI~-Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~  224 (344)
                      +|.|+ |+|.+|.+.++.+...|++|++.+|++++.+.+.++.
T Consensus         2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i   44 (212)
T d1jaya_           2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY   44 (212)
T ss_dssp             EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred             EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence            47788 5699999999999999999999999999877665444

>d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Trypanosome (Leishmania mexicana) [TaxId: 5665]

Probab=93.63  E-value=0.022  Score=44.58  Aligned_cols=82  Identities=10%  Similarity=0.023  Sum_probs=55.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC------cEEEeCC--CHHHHHHhcCCccEEEECCCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA------DKFVVSS--DLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~------~~~v~~~--~~~~~~~~~~~~dvvid~~g~  254 (344)
                      ++.|+|+|..|.+.+..+...|.+|++.+++++..+.+.+. +.      ...+..+  -...+.+...+.|+++-++..
T Consensus         9 KI~ViGaG~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~~~-~~n~~yl~~~~l~~~i~~t~~l~~a~~~ad~iiiavPs   87 (189)
T d1n1ea2           9 KAVVFGSGAFGTALAMVLSKKCREVCVWHMNEEEVRLVNEK-RENVLFLKGVQLASNITFTSDVEKAYNGAEIILFVIPT   87 (189)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTEEEEEEECSCHHHHHHHHHH-TBCTTTSTTCBCCTTEEEESCHHHHHTTCSCEEECSCH
T ss_pred             eEEEECCCHHHHHHHHHHHHcCCeEEEEEecHHHHHHHhhc-ccccccccccccccccccchhhhhccCCCCEEEEcCcH
Confidence            58999999999999988888888999999998887766322 21      1000000  001123334678999999987


Q ss_pred             chhHHHHHHhcc
Q 019199          255 DHPFDAYMSLLK  266 (344)
Q Consensus       255 ~~~~~~~~~~l~  266 (344)
                      .. ++..++.++
T Consensus        88 ~~-~~~~~~~~~   98 (189)
T d1n1ea2          88 QF-LRGFFEKSG   98 (189)
T ss_dssp             HH-HHHHHHHHC
T ss_pred             HH-HHHHHHHHH
Confidence            65 777776654

>d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Hypothetical protein MJ0882
domain: Hypothetical protein MJ0882
species: Archaeon Methanococcus jannaschii [TaxId: 2190]

Probab=93.58  E-value=0.15  Score=39.55  Aligned_cols=97  Identities=19%  Similarity=0.181  Sum_probs=59.9

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCC---c-EEEeCCCHHHHHHhcCCcc
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGA---D-KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~---~-~~v~~~~~~~~~~~~~~~d  246 (344)
                      ......++++||-+|+|. |..++.+++ .+.+|++++-++...+.+++   ..+.   . .++..+..+..  ..+.+|
T Consensus        46 ~~l~~~~~~~VLDiGcG~-G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~d~~~~~--~~~~fD  121 (194)
T d1dusa_          46 ENVVVDKDDDILDLGCGY-GVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHSDLYENV--KDRKYN  121 (194)
T ss_dssp             HHCCCCTTCEEEEETCTT-SHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEECSTTTTC--TTSCEE
T ss_pred             HhCCcCCCCeEEEEeecC-ChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEcchhhhh--ccCCce
Confidence            333448899999999853 566666665 46799999999887666633   2232   1 22222211111  125799


Q ss_pred             EEEECCC---C----chhHHHHHHhcccCCEEEEE
Q 019199          247 FIIDTAS---G----DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       247 vvid~~g---~----~~~~~~~~~~l~~~G~iv~~  274 (344)
                      +|+-...   .    ...++.+.+.|+|+|+++..
T Consensus       122 ~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~  156 (194)
T d1dusa_         122 KIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV  156 (194)
T ss_dssp             EEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred             EEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence            9986432   1    12366778889999998654

>d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.57  E-value=0.066  Score=37.95  Aligned_cols=37  Identities=35%  Similarity=0.324  Sum_probs=32.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +..++++|+|+|.+|.-+++.+..+|.+|+++.+.+.
T Consensus        20 ~~p~~v~IiGgG~ig~E~A~~l~~~G~~Vtlve~~~~   56 (117)
T d1ebda2          20 EVPKSLVVIGGGYIGIELGTAYANFGTKVTILEGAGE   56 (117)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEECCCccceeeeeeecccccEEEEEEecce
Confidence            3447899999999999999999999999999997764

>d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Archaeon Methanothermus fervidus [TaxId: 2180]

Probab=93.55  E-value=0.73  Score=34.75  Aligned_cols=94  Identities=14%  Similarity=0.082  Sum_probs=61.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC-eEEEEeCC-c-hhHHHHHHhCCCcEEEeCCCHH-HHHH-----------hcCCccE
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS-T-SKKEEALSLLGADKFVVSSDLE-QMKA-----------LGKSLDF  247 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~-~-~~~~~~~~~~g~~~~v~~~~~~-~~~~-----------~~~~~dv  247 (344)
                      +|.|.|-|.+|..+.+.+...+- +++.+-.. + .....+ .+++.+......+.. ....           +..++|+
T Consensus         3 ~VgINGfGRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~~~vDv   81 (171)
T d1cf2o1           3 AVAINGYGTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMA-LKKGYDLYVAIPERVKLFEKAGIEVAGTVDDMLDEADI   81 (171)
T ss_dssp             EEEEECCSHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHH-HHTTCCEEESSGGGHHHHHHTTCCCCEEHHHHHHTCSE
T ss_pred             EEEEEcCcHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHH-HhcCCceEecccccceeecccCcccCCChhHhhcCCCE
Confidence            57889999999999988876653 66655433 2 233444 456655433322211 1111           1247999


Q ss_pred             EEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |+||+|.-.+...+-..+..+-+.+..+..
T Consensus        82 ViEcTG~f~~~~~~~~hl~~G~K~vi~~~~  111 (171)
T d1cf2o1          82 VIDCTPEGIGAKNLKMYKEKGIKAIFQGGE  111 (171)
T ss_dssp             EEECCSTTHHHHHHHHHHHTTCEEEECTTS
T ss_pred             EEEccCCCCCHHHHHHHHHcCCCEEEECCC
Confidence            999999876677888888888888887654

>d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Hypothetical protein ECA1738
species: Erwinia carotovora [TaxId: 554]

Probab=93.53  E-value=0.074  Score=42.43  Aligned_cols=92  Identities=18%  Similarity=0.163  Sum_probs=58.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc-EEEeCCCHHHHHHhcCCccEEEECC-----
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD-KFVVSSDLEQMKALGKSLDFIIDTA-----  252 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~-~~v~~~~~~~~~~~~~~~dvvid~~-----  252 (344)
                      .++.+||=+|+|. |..+..+++ .|.+|++++.+++..+.+++..... ..+.. +.+.. ...+.+|+|+-.-     
T Consensus        19 ~~~~~VLDiGcG~-G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~-~~~~~-~~~~~fD~I~~~~vleh~   94 (225)
T d2p7ia1          19 FRPGNLLELGSFK-GDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHS-RFEDA-QLPRRYDNIVLTHVLEHI   94 (225)
T ss_dssp             CCSSCEEEESCTT-SHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEES-CGGGC-CCSSCEEEEEEESCGGGC
T ss_pred             CCCCcEEEEeCCC-cHHHHHHHH-cCCeEEEEeCcHHHhhhhhcccccccccccc-ccccc-ccccccccccccceeEec
Confidence            4567899999864 666666654 5789999999999888886665532 22222 22111 1236799987422     


Q ss_pred             CCch-hHHHHH-HhcccCCEEEEE
Q 019199          253 SGDH-PFDAYM-SLLKVAGVYVLV  274 (344)
Q Consensus       253 g~~~-~~~~~~-~~l~~~G~iv~~  274 (344)
                      ..+. .+..+. ++|+|+|.++..
T Consensus        95 ~d~~~~l~~i~~~~Lk~gG~l~i~  118 (225)
T d2p7ia1          95 DDPVALLKRINDDWLAEGGRLFLV  118 (225)
T ss_dssp             SSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred             CCHHHHHHHHHHHhcCCCceEEEE
Confidence            1222 245565 578999999865

>d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH peroxidase
species: Enterococcus faecalis [TaxId: 1351]

Probab=93.52  E-value=0.094  Score=37.55  Aligned_cols=36  Identities=28%  Similarity=0.226  Sum_probs=32.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      ..+.+|+|+|+|.+|+-++..+..+|.+|+++.+.+
T Consensus        28 ~~~k~vvViGgG~iG~E~A~~l~~~g~~Vtlie~~~   63 (123)
T d1nhpa2          28 PEVNNVVVIGSGYIGIEAAEAFAKAGKKVTVIDILD   63 (123)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred             cCCCEEEEECChHHHHHHHHHhhccceEEEEEEecC
Confidence            567899999999999999999999999999998764

>d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=93.50  E-value=0.31  Score=35.94  Aligned_cols=73  Identities=18%  Similarity=0.156  Sum_probs=46.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC-------CCcEEEeCCCHHHHHHhcCCccEEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL-------GADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~-------g~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ..+.+|.|+|+|.+|...+..+...+.  ++..++.++++.+....++       +....+...+.    +...+.|+++
T Consensus         4 ~~~~KI~IiGaG~vG~~~a~~l~~~~l~~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~~~~~d~----~~l~daDvvv   79 (148)
T d1ldna1           4 NGGARVVVIGAGFVGASYVFALMNQGIADEIVLIDANESKAIGDAMDFNHGKVFAPKPVDIWHGDY----DDCRDADLVV   79 (148)
T ss_dssp             TTSCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHTTSSSSCCEEEECCG----GGTTTCSEEE
T ss_pred             CCCCeEEEECcCHHHHHHHHHHHhcCCCceEEEEeeccccccchhccHhhCccccCCCeEEEECCH----HHhccceeEE
Confidence            456789999999999998888877664  7889998887632221121       11111222222    1236789999


Q ss_pred             ECCCCc
Q 019199          250 DTASGD  255 (344)
Q Consensus       250 d~~g~~  255 (344)
                      -+.|.+
T Consensus        80 itag~~   85 (148)
T d1ldna1          80 ICAGAN   85 (148)
T ss_dssp             ECCSCC
T ss_pred             Eecccc
Confidence            888864

>d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Dihydropteridin reductase (pteridine reductase)
species: Leishmania major [TaxId: 5664]

Probab=93.42  E-value=0.2  Score=41.14  Aligned_cols=32  Identities=22%  Similarity=0.102  Sum_probs=26.9

Q ss_pred             EEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          184 LGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       184 vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +||+|+ +++|.+.++.+...|++|++.+++.+
T Consensus         5 AlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~   37 (284)
T d1e7wa_           5 ALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSA   37 (284)
T ss_dssp             EEETTCSSHHHHHHHHHHHHTTCEEEEEESSCH
T ss_pred             EEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCH
Confidence            466787 89999999999999999998876654

>d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM1727
species: Thermotoga maritima [TaxId: 2336]

Probab=93.40  E-value=0.016  Score=43.58  Aligned_cols=82  Identities=12%  Similarity=0.071  Sum_probs=52.5

Q ss_pred             EECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHHHHhc
Q 019199          186 VIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAYMSLL  265 (344)
Q Consensus       186 I~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l  265 (344)
                      ++|+|.+|.+.+..++..+..+.+..|+.++.+.+.+..+.. ..+..      +.....|+||-++.... +..++..+
T Consensus         4 fIG~G~mg~~l~~~L~~~~~~~~v~~R~~~~~~~l~~~~~~~-~~~~~------~~~~~~DiVil~v~d~~-i~~v~~~l   75 (153)
T d2i76a2           4 FVGTGTLTRFFLECLKDRYEIGYILSRSIDRARNLAEVYGGK-AATLE------KHPELNGVVFVIVPDRY-IKTVANHL   75 (153)
T ss_dssp             EESCCHHHHHHHHTTC----CCCEECSSHHHHHHHHHHTCCC-CCSSC------CCCC---CEEECSCTTT-HHHHHTTT
T ss_pred             EEeCcHHHHHHHHHHHhCCCEEEEEeCChhhhcchhhccccc-ccchh------hhhccCcEEEEeccchh-hhHHHhhh
Confidence            579999999888766543333457889999988886666543 22211      23356899999998766 88899988


Q ss_pred             ccCCE-EEEEc
Q 019199          266 KVAGV-YVLVG  275 (344)
Q Consensus       266 ~~~G~-iv~~g  275 (344)
                      +..++ ++.+.
T Consensus        76 ~~~~~ivi~~s   86 (153)
T d2i76a2          76 NLGDAVLVHCS   86 (153)
T ss_dssp             CCSSCCEEECC
T ss_pred             cccceeeeecc
Confidence            75444 45554

>d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Acetaldehyde dehydrogenase (acylating)
species: Pseudomonas sp. [TaxId: 306]

Probab=93.38  E-value=0.49  Score=35.23  Aligned_cols=92  Identities=16%  Similarity=0.246  Sum_probs=55.5

Q ss_pred             CEEEEECCChHHH-HHHHHHHHCCC-eEEEEeC-Cch--hHHHHHHhCCCcEEEeCCCHHHHHHhc--CCccEEEECCCC
Q 019199          182 KSLGVIGLGGLGH-MAVKFGKAFGL-NVTVLST-STS--KKEEALSLLGADKFVVSSDLEQMKALG--KSLDFIIDTASG  254 (344)
Q Consensus       182 ~~vlI~Gag~~G~-~ai~~a~~~g~-~V~~~~~-~~~--~~~~~~~~~g~~~~v~~~~~~~~~~~~--~~~dvvid~~g~  254 (344)
                      -++-|+|+|.+|. ..+++++.... ++..+.+ +.+  ....+ +++|....  ....+.+.+..  .++|+||+++..
T Consensus         5 irvaIIGaG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a-~~~~i~~~--~~~~d~l~~~~~~~~iDiVf~ATpa   81 (157)
T d1nvmb1           5 LKVAIIGSGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARA-QRMGVTTT--YAGVEGLIKLPEFADIDFVFDATSA   81 (157)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHH-HHTTCCEE--SSHHHHHHHSGGGGGEEEEEECSCH
T ss_pred             cEEEEEcCcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhh-hhcCCccc--ccceeeeeecccccccCEEEEcCCc
Confidence            4688999999986 46677776644 7766654 433  23344 67775432  33333333322  479999998875


Q ss_pred             chhHH--HHHHhcccCCEEEEEcC
Q 019199          255 DHPFD--AYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       255 ~~~~~--~~~~~l~~~G~iv~~g~  276 (344)
                      .....  .+.+.++.|-.+++...
T Consensus        82 g~h~~~~~~~~aa~~G~~VID~s~  105 (157)
T d1nvmb1          82 SAHVQNEALLRQAKPGIRLIDLTP  105 (157)
T ss_dssp             HHHHHHHHHHHHHCTTCEEEECST
T ss_pred             hhHHHhHHHHHHHHcCCEEEEccc
Confidence            32233  34555676767776653

>d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH-dependent ferredoxin reductase, BphA4
species: Pseudomonas sp., KKS102 [TaxId: 306]

Probab=93.21  E-value=0.088  Score=37.64  Aligned_cols=37  Identities=22%  Similarity=0.393  Sum_probs=33.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +++++++|+|+|.+|.=++..++.+|.+|+++.+.+.
T Consensus        28 ~~~~~vvIIGgG~iG~E~A~~l~~~g~~Vtli~~~~~   64 (121)
T d1d7ya2          28 RPQSRLLIVGGGVIGLELAATARTAGVHVSLVETQPR   64 (121)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             hcCCeEEEECcchhHHHHHHHhhcccceEEEEeeccc
Confidence            6778999999999999999999999999999997754

>d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Escherichia coli, isoform B (CysM) [TaxId: 562]

Probab=93.21  E-value=0.69  Score=38.05  Aligned_cols=101  Identities=14%  Similarity=0.184  Sum_probs=64.6

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC---CchhHHHHHHhCCCcEEEeCCCHHH-------------
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST---STSKKEEALSLLGADKFVVSSDLEQ-------------  237 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~---~~~~~~~~~~~~g~~~~v~~~~~~~-------------  237 (344)
                      +.+.+.++.+|+...+|..|++++..++.+|.+.+++..   ++.+.+.+ +.+|++.++...+.+.             
T Consensus        53 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~-~~~GA~v~~v~~~~~~~~a~~~~~~~~~~  131 (292)
T d2bhsa1          53 KRGEIKPGDVLIEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAM-RAYGAELILVTKEQGMEGARDLALEMANR  131 (292)
T ss_dssp             HTTSCCTTSEEEEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHH-HHTTCEEEEECTTTHHHHHHHHHHHHHHH
T ss_pred             HhCCcCCCceeeeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHH-HHhCCCcceeecccchHHHHHHHhhcccc
Confidence            344446677666667799999999999999996655443   23345555 7899876554332110             


Q ss_pred             --------------------------HHHhcCCccEEEECCCCchhHH---HHHHhcccCCEEEEEc
Q 019199          238 --------------------------MKALGKSLDFIIDTASGDHPFD---AYMSLLKVAGVYVLVG  275 (344)
Q Consensus       238 --------------------------~~~~~~~~dvvid~~g~~~~~~---~~~~~l~~~G~iv~~g  275 (344)
                                                +.++.+.+|+++-++|+..++.   ..++...+..+++.+.
T Consensus       132 ~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Ve  198 (292)
T d2bhsa1         132 GEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQ  198 (292)
T ss_dssp             TSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEE
T ss_pred             ccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEec
Confidence                                      0111245899999888765444   4455566778877654

>d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Met-10+ protein-like
domain: Hypothetical protein PH0793
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=93.20  E-value=0.055  Score=44.47  Aligned_cols=96  Identities=11%  Similarity=0.062  Sum_probs=60.6

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCC-c--EEEeCCCHHHHHHhcCCccEEE-
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGA-D--KFVVSSDLEQMKALGKSLDFII-  249 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~-~--~~v~~~~~~~~~~~~~~~dvvi-  249 (344)
                      .+++|++||-.++| +|..++.+|+..+++|++++.+++..+.+.   +..|. +  .++..+..+...  ...+|.|+ 
T Consensus       104 ~~~~g~~VlD~~aG-~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~~~~~~--~~~~D~Ii~  180 (260)
T d2frna1         104 VAKPDELVVDMFAG-IGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPG--ENIADRILM  180 (260)
T ss_dssp             HCCTTCEEEETTCT-TTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCTTTCCC--CSCEEEEEE
T ss_pred             hcCCccEEEECcce-EcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcchHHhcc--CCCCCEEEE
Confidence            35899999998875 355566777765569999999998765553   22342 2  333333211110  14588665 


Q ss_pred             ECC-CCchhHHHHHHhcccCCEEEEEc
Q 019199          250 DTA-SGDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       250 d~~-g~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      +-. .....+..+++.++++|.+....
T Consensus       181 ~~p~~~~~~l~~a~~~l~~gG~lh~~~  207 (260)
T d2frna1         181 GYVVRTHEFIPKALSIAKDGAIIHYHN  207 (260)
T ss_dssp             CCCSSGGGGHHHHHHHEEEEEEEEEEE
T ss_pred             CCCCchHHHHHHHHhhcCCCCEEEEEe
Confidence            332 33445888999999999886554

>d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: BC2162-like
domain: Methyltransferase BC2162
species: Bacillus cereus [TaxId: 1396]

Probab=93.18  E-value=0.095  Score=43.43  Aligned_cols=100  Identities=16%  Similarity=0.121  Sum_probs=66.1

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHHHHHhcCCccEEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ..++.+..+||-+|+|. |..+..+++..  +.+|++++.+++.++.+++..   +.+..+...+...+ ...+.+|+|+
T Consensus        22 ~~~~~~~~~ILDiGcG~-G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~~~f~~~d~~~~-~~~~~fD~v~   99 (281)
T d2gh1a1          22 VWKITKPVHIVDYGCGY-GYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYDSEFLEGDATEI-ELNDKYDIAI   99 (281)
T ss_dssp             TSCCCSCCEEEEETCTT-THHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSEEEEEESCTTTC-CCSSCEEEEE
T ss_pred             HhccCCcCEEEEecCcC-CHHHHHHHHhCCCCCEEEEEecchhHhhhhhcccccccccccccccccccc-cccCCceEEE
Confidence            33457778999999874 78888888875  468999999988777664332   33322222221111 1235699998


Q ss_pred             ECCC-----C-chhHHHHHHhcccCCEEEEEcC
Q 019199          250 DTAS-----G-DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       250 d~~g-----~-~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      ....     . ...++.+.+.|+|+|+++....
T Consensus       100 ~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~~  132 (281)
T d2gh1a1         100 CHAFLLHMTTPETMLQKMIHSVKKGGKIICFEP  132 (281)
T ss_dssp             EESCGGGCSSHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred             EehhhhcCCCHHHHHHHHHHHcCcCcEEEEEEC
Confidence            6432     2 1347889999999999987753

>d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermus thermophilus [TaxId: 274]

Probab=93.18  E-value=0.2  Score=42.19  Aligned_cols=94  Identities=16%  Similarity=0.134  Sum_probs=63.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCC-----C-----cEEEeCCCHHHHHHhcCCccE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLG-----A-----DKFVVSSDLEQMKALGKSLDF  247 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g-----~-----~~~v~~~~~~~~~~~~~~~dv  247 (344)
                      ...++|||+|.|. |..+-.+++... .+|.+++-+++-.+.+++-+.     .     -.++..+....+++..+++|+
T Consensus        76 ~~pk~VLiiG~G~-G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDv  154 (312)
T d1uira_          76 PEPKRVLIVGGGE-GATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVIDDARAYLERTEERYDV  154 (312)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEESCHHHHHHHCCCCEEE
T ss_pred             CCcceEEEeCCCc-hHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEchHHHHhhhcCCcccE
Confidence            3457899998753 556666777654 489999999887777754442     1     234444555666666678999


Q ss_pred             EE-ECC---CC---------chhHHHHHHhcccCCEEEE
Q 019199          248 II-DTA---SG---------DHPFDAYMSLLKVAGVYVL  273 (344)
Q Consensus       248 vi-d~~---g~---------~~~~~~~~~~l~~~G~iv~  273 (344)
                      +| |..   +.         ..-++.+.+.|+++|.++.
T Consensus       155 Ii~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~  193 (312)
T d1uira_         155 VIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGM  193 (312)
T ss_dssp             EEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEE
T ss_pred             EEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEE
Confidence            86 442   21         1236788899999999875

>d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=93.13  E-value=0.59  Score=33.78  Aligned_cols=72  Identities=13%  Similarity=0.126  Sum_probs=44.5

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHh-----cCCccEEEECCCCc
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKAL-----GKSLDFIIDTASGD  255 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~-----~~~~dvvid~~g~~  255 (344)
                      +|.|.|+ |-+|...++..... +.++.......+..... ...++|.++|.+.++...+.     ..+..+|+-++|..
T Consensus         1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~-~~~~~DvvIDFS~p~~~~~~~~~~~~~~~~~ViGTTG~~   79 (135)
T d1yl7a1           1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLL-TDGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGFT   79 (135)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHH-HTTTCSEEEECCCTTTHHHHHHHHHHTTCEEEECCCCCC
T ss_pred             CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhh-ccccCCEEEEcccHHHHHHHHHHHHhcCCCEEEeccccc
Confidence            5789997 99999988887654 56776555444434333 23456777776665432221     25566677666653

>d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Carminomycin 4-O-methyltransferase
species: Streptomyces peucetius [TaxId: 1950]

Probab=93.12  E-value=0.074  Score=43.35  Aligned_cols=101  Identities=19%  Similarity=0.126  Sum_probs=60.9

Q ss_pred             HhccCCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HhCCC-c-EEEeCCCHHHHHHhcCCcc
Q 019199          173 MRHKMNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEAL---SLLGA-D-KFVVSSDLEQMKALGKSLD  246 (344)
Q Consensus       173 ~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~---~~~g~-~-~~v~~~~~~~~~~~~~~~d  246 (344)
                      ...-.+....+||-+|+| .|..+..+++.. +.++++++.. +..+.+.   .+.|. + .-+...+  .......++|
T Consensus        73 ~~~~d~~~~~~VLDvGcG-~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~D--~~~~~~~~~D  148 (253)
T d1tw3a2          73 AAAYDWTNVRHVLDVGGG-KGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEGD--FFEPLPRKAD  148 (253)
T ss_dssp             HHHSCCTTCSEEEEETCT-TSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEECC--TTSCCSSCEE
T ss_pred             HhhcCCccCCEEEEeCCC-CCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhcccc--chhhcccchh
Confidence            334445777899999986 478888999887 5689888864 3333332   23332 1 1111111  1111235689


Q ss_pred             EEEECCC-----Cc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          247 FIIDTAS-----GD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       247 vvid~~g-----~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +|+-..-     .+   ..++++.+.|+|+|+++.....
T Consensus       149 ~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~~  187 (253)
T d1tw3a2         149 AIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHERD  187 (253)
T ss_dssp             EEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             heeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEecc
Confidence            9874322     11   2367888999999999987543

>d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Protein arginine N-methyltransferase 1, PRMT1
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.09  E-value=0.071  Score=45.12  Aligned_cols=98  Identities=17%  Similarity=0.157  Sum_probs=54.4

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH---HHhCCC-c--EEEeCCCHHHHHHhcC
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA---LSLLGA-D--KFVVSSDLEQMKALGK  243 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~---~~~~g~-~--~~v~~~~~~~~~~~~~  243 (344)
                      ++.+...+.+|++||-+|+|. |..++.+|+ .|+ +|++++.++.- ..+   .+..+. +  .++.... ..+.....
T Consensus        24 ai~~~~~~~~~~~VLDiGcG~-G~ls~~aa~-~Ga~~V~avd~s~~~-~~a~~~~~~n~~~~~v~~~~~~~-~~~~~~~~   99 (316)
T d1oria_          24 SMFHNRHLFKDKVVLDVGSGT-GILCMFAAK-AGARKVIGIECSSIS-DYAVKIVKANKLDHVVTIIKGKV-EEVELPVE   99 (316)
T ss_dssp             HHHTCHHHHTTCEEEEETCTT-SHHHHHHHH-TTCSEEEEEECSTTH-HHHHHHHHHTTCTTTEEEEESCT-TTCCCSSS
T ss_pred             HHHhccccCCcCEEEEEecCC-cHHHHHHHH-hCCCEEEEEcCcHHH-hhhhhHHHHhCCccccceEeccH-HHcccccc
Confidence            343333346899999999874 777776666 576 89999977542 222   122332 1  2222221 11111125


Q ss_pred             CccEEEECCC-----Cc----hhHHHHHHhcccCCEEE
Q 019199          244 SLDFIIDTAS-----GD----HPFDAYMSLLKVAGVYV  272 (344)
Q Consensus       244 ~~dvvid~~g-----~~----~~~~~~~~~l~~~G~iv  272 (344)
                      .+|+++....     ++    ..+...-+.|+|+|+++
T Consensus       100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii  137 (316)
T d1oria_         100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF  137 (316)
T ss_dssp             CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence            6899875322     11    12334456899999987

>d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=93.09  E-value=0.21  Score=42.25  Aligned_cols=37  Identities=11%  Similarity=-0.024  Sum_probs=30.0

Q ss_pred             CCEEEEECC---ChHHHHHHHHHHHCCCeEEEEeCCchhH
Q 019199          181 GKSLGVIGL---GGLGHMAVKFGKAFGLNVTVLSTSTSKK  217 (344)
Q Consensus       181 g~~vlI~Ga---g~~G~~ai~~a~~~g~~V~~~~~~~~~~  217 (344)
                      ++..||+|+   .++|.+.++.+...|++|++..++....
T Consensus         2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~   41 (329)
T d1uh5a_           2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYN   41 (329)
T ss_dssp             CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHH
T ss_pred             CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhh
Confidence            456788994   3899999999999999999988776543

>d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arginine methyltransferase
domain: Arginine methyltransferase, HMT1
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=93.08  E-value=0.087  Score=44.77  Aligned_cols=98  Identities=21%  Similarity=0.182  Sum_probs=52.7

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHH---HHhCCC--cEEEeCCCHHHHHHhcCCc
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEA---LSLLGA--DKFVVSSDLEQMKALGKSL  245 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~---~~~~g~--~~~v~~~~~~~~~~~~~~~  245 (344)
                      +.+.....+|++||-+|+|. |..++.+++ .|+ +|++++.++. ...+   .+..+.  ...+...+...+......+
T Consensus        30 I~~~~~~~~~~~VLDlGcGt-G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~~~~~~~i~~i~~~~~~l~~~~~~~  106 (328)
T d1g6q1_          30 IIQNKDLFKDKIVLDVGCGT-GILSMFAAK-HGAKHVIGVDMSSI-IEMAKELVELNGFSDKITLLRGKLEDVHLPFPKV  106 (328)
T ss_dssp             HHHHHHHHTTCEEEEETCTT-SHHHHHHHH-TCCSEEEEEESSTH-HHHHHHHHHHTTCTTTEEEEESCTTTSCCSSSCE
T ss_pred             HHhccccCCcCEEEEeCCCC-CHHHHHHHH-hCCCEEEEEeCCHH-HHHHHHHHHHhCccccceEEEeehhhccCcccce
Confidence            33333336889999999873 666655555 676 8999997753 2222   233342  2222222211111112579


Q ss_pred             cEEEECCC-----Cch----hHHHHHHhcccCCEEE
Q 019199          246 DFIIDTAS-----GDH----PFDAYMSLLKVAGVYV  272 (344)
Q Consensus       246 dvvid~~g-----~~~----~~~~~~~~l~~~G~iv  272 (344)
                      |+++...-     +..    .+...-+.|+|+|+++
T Consensus       107 D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii  142 (328)
T d1g6q1_         107 DIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF  142 (328)
T ss_dssp             EEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred             eEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence            99875321     111    1233336899999986

>d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=93.05  E-value=0.082  Score=37.56  Aligned_cols=36  Identities=17%  Similarity=0.420  Sum_probs=32.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +...+|+|+|+|.+|.=++..++.+|.+|+++.+.+
T Consensus        20 ~~p~~v~IiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   55 (117)
T d1onfa2          20 KESKKIGIVGSGYIAVELINVIKRLGIDSYIFARGN   55 (117)
T ss_dssp             CCCSEEEEECCSHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred             CCCCEEEEECCchHHHHHHHHHHhccccceeeehhc
Confidence            445789999999999999999999999999999764

>d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase
species: Escherichia coli [TaxId: 562]

Probab=92.98  E-value=0.81  Score=33.69  Aligned_cols=92  Identities=12%  Similarity=0.209  Sum_probs=64.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC--CCeEEEEe--CCchhHHHHHHhCCCcEEEeCCCHH--H----H-------------
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAF--GLNVTVLS--TSTSKKEEALSLLGADKFVVSSDLE--Q----M-------------  238 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~--g~~V~~~~--~~~~~~~~~~~~~g~~~~v~~~~~~--~----~-------------  238 (344)
                      ++.|+|+ |++|..++.+.+..  ..+|....  ++-+.+....++|....++..++..  .    +             
T Consensus         3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~~~~~l~~~l~~~~~~~~~~~g~   82 (151)
T d1q0qa2           3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEASAKLLKTMLQQQGSRTEVLSGQ   82 (151)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHHHHHHHHHHHHHTTCCCEEEESH
T ss_pred             eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHHHHHHHHHHhhhhccccccccCh
Confidence            5889998 99999999999886  34776655  3344555555778877766554321  1    1             


Q ss_pred             ---HHh--cCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          239 ---KAL--GKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       239 ---~~~--~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                         .++  ..++|+|+.+..+...+.-.+..++.+-++.+.
T Consensus        83 ~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA  123 (151)
T d1q0qa2          83 QAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA  123 (151)
T ss_dssp             HHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred             HHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence               111  147899999988877799999999988776554

>d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein TTHA1280, middle and C-terminal domains
species: Thermus thermophilus [TaxId: 274]

Probab=92.97  E-value=0.19  Score=42.35  Aligned_cols=97  Identities=15%  Similarity=0.166  Sum_probs=60.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH---hCCCc--EEEeCCCHHHHHHh---cCCccEEEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS---LLGAD--KFVVSSDLEQMKAL---GKSLDFIID  250 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~---~~g~~--~~v~~~~~~~~~~~---~~~~dvvid  250 (344)
                      .+|++||=.++|+ |..++++|+ .+.+|+.++.++..++.+.+   ..|.+  ..+..+..+.++..   .+.||+|+-
T Consensus       144 ~~g~rVLDl~~gt-G~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~~~~~~~~~~~~~fD~Vi~  221 (318)
T d1wxxa2         144 FRGERALDVFSYA-GGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAFDLLRRLEKEGERFDLVVL  221 (318)
T ss_dssp             CCEEEEEEETCTT-THHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHHHHHHHHHHTTCCEEEEEE
T ss_pred             hCCCeeeccCCCC-cHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHHHHhhhhHhhhcCCCEEEE
Confidence            5689999987643 333455554 35599999999987766633   34532  23333334444333   467999874


Q ss_pred             CCC-----Cc----------hhHHHHHHhcccCCEEEEEcCC
Q 019199          251 TAS-----GD----------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 ~~g-----~~----------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      -..     ..          ..+..+++.|+|+|.++.+..+
T Consensus       222 DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~scs  263 (318)
T d1wxxa2         222 DPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASCS  263 (318)
T ss_dssp             CCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             cCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            221     11          2345777889999999988655

>d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.97  E-value=0.18  Score=41.75  Aligned_cols=95  Identities=20%  Similarity=0.218  Sum_probs=61.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC---------CcEEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG---------ADKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g---------~~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ..-++|||+|.|. |..+-.+++..+. +|++++-+++-.+.+++-+.         --.++..+....+++..+++|++
T Consensus        77 ~~pk~vLiiGgG~-G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~~~~~~~~~~~~d~rv~i~~~Da~~~l~~~~~~yDvI  155 (285)
T d2o07a1          77 PNPRKVLIIGGGD-GGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVGDGFEFMKQNQDAFDVI  155 (285)
T ss_dssp             SSCCEEEEEECTT-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHHHTCSSCEEEE
T ss_pred             cCcCeEEEeCCCc-hHHHHHHHHcCCcceeeeccCCHHHHHHHHhhchhhccccCCCCceEEEccHHHHHhcCCCCCCEE
Confidence            3447899998643 5556667776655 89999888887777744341         12344344445666556789998


Q ss_pred             E-ECCC---------CchhHHHHHHhcccCCEEEEE
Q 019199          249 I-DTAS---------GDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       249 i-d~~g---------~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      + |...         +.+-++.+-+.|+++|.++.-
T Consensus       156 i~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q  191 (285)
T d2o07a1         156 ITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ  191 (285)
T ss_dssp             EEECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred             EEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEe
Confidence            6 4332         123367778899999999864

>d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: CDP-tyvelose-2-epimerase
species: Salmonella typhi [TaxId: 90370]

Probab=92.96  E-value=0.1  Score=43.82  Aligned_cols=71  Identities=23%  Similarity=0.190  Sum_probs=46.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC--ch---hHHHHHHhCCCcEEE--eCCCHHHHHHhc--CCccEEEECC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS--TS---KKEEALSLLGADKFV--VSSDLEQMKALG--KSLDFIIDTA  252 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~--~~---~~~~~~~~~g~~~~v--~~~~~~~~~~~~--~~~dvvid~~  252 (344)
                      +|||+|+ |.+|..++..+...|.+|++++.-  ..   +...+ +..+.-..+  |-.+.+.+.+..  .++|+||.+.
T Consensus         2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~-~~~~~~~~i~~Di~~~~~l~~~~~~~~~d~Vih~a   80 (338)
T d1orra_           2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWL-SSLGNFEFVHGDIRNKNDVTRLITKYMPDSCFHLA   80 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHH-HTTCCCEEEECCTTCHHHHHHHHHHHCCSEEEECC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHh-hccCCcEEEEcccCCHHHHHHHHHhcCCceEEeec
Confidence            6999998 999999999998889999998632  11   22333 233322222  345555555543  3579999987


Q ss_pred             CC
Q 019199          253 SG  254 (344)
Q Consensus       253 g~  254 (344)
                      +.
T Consensus        81 a~   82 (338)
T d1orra_          81 GQ   82 (338)
T ss_dssp             CC
T ss_pred             cc
Confidence            63

>d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.84  E-value=0.038  Score=42.23  Aligned_cols=98  Identities=14%  Similarity=0.084  Sum_probs=64.3

Q ss_pred             CCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH--hCCCcEE--EeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALS--LLGADKF--VVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~--~~g~~~~--v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      -.|.+++|+|. ..+|.=+..++...|++|+.+............  ..-+..+  +.....+.+++....+|+++.++|
T Consensus        27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lk~~~~~aDIvIsavG  106 (171)
T d1edza1          27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQKFTRGESLKLNKHHVEDLGEYSEDLLKKCSLDSDVVITGVP  106 (171)
T ss_dssp             TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEEEEESCCCSSCCCCEEEEEEECCHHHHHHHHHHCSEEEECCC
T ss_pred             CCCCEEEEECCccccHHHHHHHHHHCCCEEEEeccccccccccccceeeeeeccccccccchhHHhhccccCCEEEEccC
Confidence            57899999997 688998888888899999988755332100000  0011111  112234555555567999999999


Q ss_pred             CchhHHHHHHhcccCCEEEEEcCC
Q 019199          254 GDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+. +.---+.++++..++++|..
T Consensus       107 ~p~-~~i~~d~ik~GavvIDvGi~  129 (171)
T d1edza1         107 SEN-YKFPTEYIKEGAVCINFACT  129 (171)
T ss_dssp             CTT-CCBCTTTSCTTEEEEECSSS
T ss_pred             CCc-cccChhhcccCceEeecccc
Confidence            876 32233578899999999866

>d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, middle domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=92.81  E-value=0.076  Score=42.61  Aligned_cols=37  Identities=22%  Similarity=0.272  Sum_probs=33.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +.+++|+|+|+|..|+.++..++..|.+|++++..++
T Consensus        47 ~~~k~VvIIGaGpAGl~aA~~l~~~G~~v~l~E~~~~   83 (233)
T d1djqa3          47 KNKDSVLIVGAGPSGSEAARVLMESGYTVHLTDTAEK   83 (233)
T ss_dssp             SSCCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             cCCceEEEEcccHHHHHHHHHHHHhccceeeEeeccc
Confidence            6778999999999999999999999999999987654

>d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=92.77  E-value=0.87  Score=33.21  Aligned_cols=71  Identities=23%  Similarity=0.229  Sum_probs=44.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCc-----EEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGAD-----KFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~-----~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      .+|.|+|| |.+|..++.++...+.  ++..++.++.+.+.. +..-+.     ..+..  .....+..++.|+++-+.|
T Consensus         1 sKv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~-Dl~~~~~~~~~~~~~~--~~~~~~~~~~aDivVitag   77 (144)
T d1mlda1           1 AKVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAA-DLSHIETRATVKGYLG--PEQLPDCLKGCDVVVIPAG   77 (144)
T ss_dssp             CEEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHH-HHTTSSSSCEEEEEES--GGGHHHHHTTCSEEEECCS
T ss_pred             CeEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhH-HHhhhhhhcCCCeEEc--CCChHHHhCCCCEEEECCC
Confidence            36889997 9999999999988876  688888776554333 222111     11111  1222233367999998888


Q ss_pred             Cc
Q 019199          254 GD  255 (344)
Q Consensus       254 ~~  255 (344)
                      .+
T Consensus        78 ~~   79 (144)
T d1mlda1          78 VP   79 (144)
T ss_dssp             CC
T ss_pred             cC
Confidence            53

>d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=92.74  E-value=0.087  Score=37.31  Aligned_cols=35  Identities=14%  Similarity=0.216  Sum_probs=31.4

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .++++|+|+|.+|.-+++.++.+|.+|+++.+.+.
T Consensus        21 p~~vvIiGgG~ig~E~A~~l~~~G~~Vtlve~~~~   55 (116)
T d1gesa2          21 PERVAVVGAGYIGVELGGVINGLGAKTHLFEMFDA   55 (116)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             CCEEEEECCChhhHHHHHHhhccccEEEEEeecch
Confidence            46899999999999999999999999999998753

>d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Phenylcoumaran benzylic ether reductase
species: Loblolly pine (Pinus taeda) [TaxId: 3352]

Probab=92.66  E-value=0.16  Score=41.67  Aligned_cols=73  Identities=19%  Similarity=0.247  Sum_probs=47.5

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhH------HHH--HHhCCCcEEE-eCCCHHHHHHhcCCccEEEEC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKK------EEA--LSLLGADKFV-VSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~------~~~--~~~~g~~~~v-~~~~~~~~~~~~~~~dvvid~  251 (344)
                      .+|||+|+ |.+|..++..+...|.+|++++++....      ...  ....+.+.+. |..+.....+...+.+.++.+
T Consensus         4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~vi~~   83 (307)
T d1qyca_           4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVKNVDVVIST   83 (307)
T ss_dssp             CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHHTCSEEEEC
T ss_pred             CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCccccchhHHHHHHhhccCCcEEEEeecccchhhhhhhhhceeeeec
Confidence            56999998 9999999999988999999999865431      111  1122333322 333444444444567888877


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      .+.
T Consensus        84 ~~~   86 (307)
T d1qyca_          84 VGS   86 (307)
T ss_dssp             CCG
T ss_pred             ccc
Confidence            764

>d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Sulfolipid biosynthesis protein SQD1
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.65  E-value=0.12  Score=44.68  Aligned_cols=31  Identities=23%  Similarity=0.224  Sum_probs=28.1

Q ss_pred             CCEEEEECC-ChHHHHHHHHHHHCCCeEEEEe
Q 019199          181 GKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLS  211 (344)
Q Consensus       181 g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~  211 (344)
                      |.+|||+|+ |.+|..++..+...|.+|+++|
T Consensus         1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD   32 (393)
T d1i24a_           1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD   32 (393)
T ss_dssp             -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred             CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence            678999998 9999999999999999999987

>d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: GDP-mannose 6-dehydrogenase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=92.48  E-value=0.13  Score=40.19  Aligned_cols=71  Identities=17%  Similarity=0.127  Sum_probs=48.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHH---------------hcCCccE
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKA---------------LGKSLDF  247 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~---------------~~~~~dv  247 (344)
                      +|.|+|+|-+|+..+..+...|.+|++++.++++.+.+  .-|-.........+.+.+               .....|+
T Consensus         2 kI~ViGlG~vGl~~a~~la~~g~~V~g~D~n~~~i~~l--n~g~~p~~e~~~~~~l~~~~~~~~~~~~~~~~~~i~~~d~   79 (202)
T d1mv8a2           2 RISIFGLGYVGAVCAGCLSARGHEVIGVDVSSTKIDLI--NQGKSPIVEPGLEALLQQGRQTGRLSGTTDFKKAVLDSDV   79 (202)
T ss_dssp             EEEEECCSTTHHHHHHHHHHTTCEEEEECSCHHHHHHH--HTTCCSSCCTTHHHHHHHHHHTTCEEEESCHHHHHHTCSE
T ss_pred             EEEEECCCHhHHHHHHHHHhCCCcEEEEeCCHHHHHHh--cccCCcccchhhhhhhhhhhcccccccCCCHHHHHhhCCE
Confidence            47889999999998888888899999999999888777  223222111111222211               1136799


Q ss_pred             EEECCCCc
Q 019199          248 IIDTASGD  255 (344)
Q Consensus       248 vid~~g~~  255 (344)
                      +|-|++++
T Consensus        80 i~i~VpTP   87 (202)
T d1mv8a2          80 SFICVGTP   87 (202)
T ss_dssp             EEECCCCC
T ss_pred             EEEecCcc
Confidence            99999875

>d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: 6-phosphogluconate dehydrogenase
species: Trypanosoma brucei [TaxId: 5691]

Probab=92.46  E-value=1.1  Score=33.72  Aligned_cols=92  Identities=20%  Similarity=0.226  Sum_probs=55.4

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCc----EEEeCCCHHHHHHhcCCccEEEECCCCchh--
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGAD----KFVVSSDLEQMKALGKSLDFIIDTASGDHP--  257 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~----~~v~~~~~~~~~~~~~~~dvvid~~g~~~~--  257 (344)
                      |-|+|.|.+|...+.-+...|.+|++.++++++.+.+.++.+..    ........+.........+.++..+.....  
T Consensus         4 IGvIGlG~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   83 (178)
T d1pgja2           4 VGVVGLGVMGANLALNIAEKGFKVAVFNRTYSKSEEFMKANASAPFAGNLKAFETMEAFAASLKKPRKALILVQAGAATD   83 (178)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSHHHHHHHHHHTTTSTTGGGEEECSCHHHHHHHBCSSCEEEECCCCSHHHH
T ss_pred             EEEEeehHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHcCCccccccchhhhhhhhHHHHhcccceEEEEeecCcchhh
Confidence            66789999999988888888999999999999998885554321    111112222222222344555555443322  


Q ss_pred             --HHHHHHhcccCCEEEEEc
Q 019199          258 --FDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       258 --~~~~~~~l~~~G~iv~~g  275 (344)
                        +......+.++..++..+
T Consensus        84 ~~~~~~~~~~~~~~iii~~s  103 (178)
T d1pgja2          84 STIEQLKKVFEKGDILVDTG  103 (178)
T ss_dssp             HHHHHHHHHCCTTCEEEECC
T ss_pred             hhhhhhhhhccccceecccC
Confidence              234444555555555553

>d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Putative spermidine synthetase PF0127 (SpeE)
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.43  E-value=0.34  Score=39.81  Aligned_cols=94  Identities=20%  Similarity=0.248  Sum_probs=59.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCC---------------cEEEeCCCHHHHHHhcC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGA---------------DKFVVSSDLEQMKALGK  243 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~---------------~~~v~~~~~~~~~~~~~  243 (344)
                      ....+|||+|+|. |..+-.+++.-..+|.+++-+++-.+.+++-++.               -.++..+....+++ .+
T Consensus        71 ~~p~~vLiiG~G~-G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~Da~~~l~~-~~  148 (276)
T d1mjfa_          71 PKPKRVLVIGGGD-GGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIGDGFEFIKN-NR  148 (276)
T ss_dssp             SCCCEEEEEECTT-SHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEESCHHHHHHH-CC
T ss_pred             CCCceEEEecCCc-hHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEChHHHHHhc-cC
Confidence            4557899998643 3444555554444899998888877777444431               13444444445543 57


Q ss_pred             CccEEE-ECCCC---------chhHHHHHHhcccCCEEEEE
Q 019199          244 SLDFII-DTASG---------DHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       244 ~~dvvi-d~~g~---------~~~~~~~~~~l~~~G~iv~~  274 (344)
                      ++|++| |....         ..-++.+-+.|+++|.++.-
T Consensus       149 ~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q  189 (276)
T d1mjfa_         149 GFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ  189 (276)
T ss_dssp             CEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred             CCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEe
Confidence            899986 44432         12377788999999998754

>d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: D-aminoacid oxidase, N-terminal domain
domain: D-aminoacid oxidase, N-terminal domain
species: Rhodotorula gracilis [TaxId: 5286]

Probab=92.41  E-value=0.1  Score=41.97  Aligned_cols=35  Identities=23%  Similarity=0.313  Sum_probs=31.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      +.-.+|+|+|+|..|++++..+...|.+|+++++.
T Consensus         4 ~~~~kVvVIGaGiaGl~~A~~L~~~G~~V~vier~   38 (268)
T d1c0pa1           4 HSQKRVVVLGSGVIGLSSALILARKGYSVHILARD   38 (268)
T ss_dssp             CCSCEEEEECCSHHHHHHHHHHHHTTCEEEEEESS
T ss_pred             CCCCcEEEECccHHHHHHHHHHHHCCCCEEEEeCC
Confidence            44567999999999999999999999999999864

>d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.38  E-value=0.12  Score=36.93  Aligned_cols=34  Identities=29%  Similarity=0.292  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      .++++|+|+|.+|.=+++++..+|.+|+++.+.+
T Consensus        23 p~~~vIiG~G~ig~E~A~~l~~lG~~Vtii~~~~   56 (122)
T d1v59a2          23 PKRLTIIGGGIIGLEMGSVYSRLGSKVTVVEFQP   56 (122)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCeEEEECCCchHHHHHHHHHhhCcceeEEEecc
Confidence            3689999999999999999999999999999775

>d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=92.32  E-value=0.13  Score=36.54  Aligned_cols=37  Identities=32%  Similarity=0.364  Sum_probs=32.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +..++++|+|+|.+|.=.++.++.+|.+|+++.+.+.
T Consensus        20 ~~p~~i~IiG~G~ig~E~A~~l~~~G~~Vtiv~~~~~   56 (119)
T d3lada2          20 NVPGKLGVIGAGVIGLELGSVWARLGAEVTVLEAMDK   56 (119)
T ss_dssp             SCCSEEEEECCSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             cCCCeEEEECCChHHHHHHHHHHHcCCceEEEEeecc
Confidence            3458899999999999999999999999999997753

>d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Siroheme synthase N-terminal domain-like
domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=92.32  E-value=0.057  Score=40.22  Aligned_cols=34  Identities=24%  Similarity=0.229  Sum_probs=30.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST  212 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~  212 (344)
                      -.|.+|||+|+|.+|..-+..+...|++|++++.
T Consensus        11 l~gkrvLViGgG~va~~ka~~Ll~~GA~VtVvap   44 (150)
T d1kyqa1          11 LKDKRILLIGGGEVGLTRLYKLMPTGCKLTLVSP   44 (150)
T ss_dssp             CTTCEEEEEEESHHHHHHHHHHGGGTCEEEEEEE
T ss_pred             eCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEeC
Confidence            4689999999999999999999999999999864

>d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=92.27  E-value=0.28  Score=40.66  Aligned_cols=95  Identities=17%  Similarity=0.238  Sum_probs=62.8

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCC--------C-cEEEeCCCHHHHHHhc-CCccEE
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLG--------A-DKFVVSSDLEQMKALG-KSLDFI  248 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g--------~-~~~v~~~~~~~~~~~~-~~~dvv  248 (344)
                      .-++|||+|.|. |..+-.+++..+. +|.+++-+++-.+.+++-++        . -.++..+....+.+.. +.+|++
T Consensus        80 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~~~f~~~~~~~~~~r~~i~~~Da~~~l~~~~~~~yDvI  158 (290)
T d1xj5a_          80 NPKKVLVIGGGD-GGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIGDGVAFLKNAAEGSYDAV  158 (290)
T ss_dssp             CCCEEEEETCSS-SHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEESCHHHHHHTSCTTCEEEE
T ss_pred             CCcceEEecCCc-hHHHHHHHhcccceeeEEecCCHHHHHHHHHhchhhhccccCCCcEEEEccHHHHHhhccccCccEE
Confidence            346899998643 4556677777665 89999988887777744342        1 2344444455665554 479987


Q ss_pred             E-ECCC---------CchhHHHHHHhcccCCEEEEEc
Q 019199          249 I-DTAS---------GDHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 i-d~~g---------~~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      | |...         +..-++.+.++|+++|.++.=.
T Consensus       159 i~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q~  195 (290)
T d1xj5a_         159 IVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQA  195 (290)
T ss_dssp             EECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEec
Confidence            6 4432         1234788889999999998653

>d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Fatty oxidation complex alpha subunit, middle domain
species: Pseudomonas fragi [TaxId: 296]

Probab=92.21  E-value=0.079  Score=41.07  Aligned_cols=39  Identities=18%  Similarity=0.191  Sum_probs=33.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA  220 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~  220 (344)
                      ++|.|+|+|.+|...+.++...|.+|++.+.+++.++.+
T Consensus         5 ~~vaViGaG~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~   43 (186)
T d1wdka3           5 KQAAVLGAGIMGGGIAYQSASKGTPILMKDINEHGIEQG   43 (186)
T ss_dssp             SSEEEECCHHHHHHHHHHHHHTTCCEEEECSSHHHHHHH
T ss_pred             CEEEEECcCHHHHHHHHHHHhCCCeEEEEECCHHHHhhh
Confidence            458899999999998888888899999999998876554

>d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Type II 3-hydroxyacyl-CoA dehydrogenase
species: Thermus thermophilus [TaxId: 274]

Probab=92.20  E-value=0.079  Score=42.52  Aligned_cols=36  Identities=36%  Similarity=0.323  Sum_probs=31.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhH
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKK  217 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~  217 (344)
                      +++||+|+ +++|.+.++.+...|++|++++++++..
T Consensus         2 K~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~   38 (241)
T d1uaya_           2 RSALVTGGASGLGRAAALALKARGYRVVVLDLRREGE   38 (241)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCSS
T ss_pred             CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcccc
Confidence            56788998 9999999999999999999999887643

>d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: DTDP-4-dehydrorhamnose reductase RfbD
species: Clostridium acetobutylicum [TaxId: 1488]

Probab=92.15  E-value=0.16  Score=41.46  Aligned_cols=32  Identities=22%  Similarity=0.200  Sum_probs=28.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +|||+|+ |.+|..++..++..|.+|+++++.+
T Consensus         3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~~   35 (281)
T d1vl0a_           3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQD   35 (281)
T ss_dssp             EEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT
T ss_pred             EEEEECCCCHHHHHHHHHHHhCCCEEEEeechh
Confidence            5899998 9999999999999999999998753

>d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Escherichia coli [TaxId: 562]

Probab=92.13  E-value=0.35  Score=40.77  Aligned_cols=72  Identities=17%  Similarity=0.002  Sum_probs=47.3

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC----chhHHHHH--HhCCCcEE-EeCCCHHHHHHhc--CCccEEEECC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS----TSKKEEAL--SLLGADKF-VVSSDLEQMKALG--KSLDFIIDTA  252 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~----~~~~~~~~--~~~g~~~~-v~~~~~~~~~~~~--~~~dvvid~~  252 (344)
                      +|||+|+ |.+|..++..+...|.+|+++++.    .+......  ..-+...+ .|-.+.+.+.+.-  .++|+||.++
T Consensus         2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~~d~ViHlA   81 (338)
T d1udca_           2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIERLGGKHPTFVEGDIRNEALMTEILHDHAIDTVIHFA   81 (338)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHHHHHTSCCEEEECCTTCHHHHHHHHHHTTCSEEEECC
T ss_pred             EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHHhhcCCCCEEEEeecCCHHHHHHHHhccCCCEEEECC
Confidence            5899998 999999999999999999998752    22222221  11123222 3445666665543  4799999987


Q ss_pred             CC
Q 019199          253 SG  254 (344)
Q Consensus       253 g~  254 (344)
                      +.
T Consensus        82 a~   83 (338)
T d1udca_          82 GL   83 (338)
T ss_dssp             SC
T ss_pred             Cc
Confidence            53

>d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Caenorhabditis elegans [TaxId: 6239]

Probab=92.01  E-value=0.37  Score=40.29  Aligned_cols=96  Identities=21%  Similarity=0.233  Sum_probs=62.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHhcCCccEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      ...++|||+|.|. |..+-.+++.... +|.+++-+++-.+.+.+-+..         ..++..+....+++..+.+|+|
T Consensus       105 ~~pk~VLIiGgG~-G~~~rellk~~~v~~v~~VEID~~Vv~~a~~~~~~~~~~~~dprv~i~i~Da~~~l~~~~~~yDvI  183 (312)
T d2b2ca1         105 PDPKRVLIIGGGD-GGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCGDGFEFLKNHKNEFDVI  183 (312)
T ss_dssp             SSCCEEEEESCTT-SHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECSCHHHHHHHCTTCEEEE
T ss_pred             CCCCeEEEeCCCc-hHHHHHHHHcCCcceEEEEcccHHHHHHHHhhchhhccccCCCCeEEEEchHHHHHHhCCCCCCEE
Confidence            3446899998653 4456677776665 899999888877777544431         1233333345666656789998


Q ss_pred             EECCCC----------chhHHHHHHhcccCCEEEEEc
Q 019199          249 IDTASG----------DHPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       249 id~~g~----------~~~~~~~~~~l~~~G~iv~~g  275 (344)
                      |--+..          ..-++.+.++|+++|.++.-+
T Consensus       184 I~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~  220 (312)
T d2b2ca1         184 ITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG  220 (312)
T ss_dssp             EECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred             EEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence            732211          123667788999999998754

>d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: L-aminoacid oxidase
species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]

Probab=91.99  E-value=0.088  Score=43.99  Aligned_cols=36  Identities=31%  Similarity=0.293  Sum_probs=31.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      ....+|+|+|+|..|++++..++..|.+|++++..+
T Consensus        28 ~~pkkV~IIGaG~aGLsaA~~L~~~G~~V~vlE~~~   63 (370)
T d2iida1          28 SNPKHVVIVGAGMAGLSAAYVLAGAGHQVTVLEASE   63 (370)
T ss_dssp             SSCCEEEEECCBHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHHCCCCEEEEeCCC
Confidence            455789999999999999999988999999998764

>d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=91.94  E-value=0.15  Score=36.99  Aligned_cols=37  Identities=27%  Similarity=0.284  Sum_probs=33.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +.+.+++|+|+|.+|.-++..++.+|.+|+++.+.+.
T Consensus        33 ~~~k~v~VIGgG~iG~E~A~~l~~~g~~Vtvie~~~~   69 (133)
T d1q1ra2          33 IADNRLVVIGGGYIGLEVAATAIKANMHVTLLDTAAR   69 (133)
T ss_dssp             CTTCEEEEECCSHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred             ccCCEEEEECCchHHHHHHHHHHhhCcceeeeeeccc
Confidence            5678999999999999999999999999999997754

>d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=91.77  E-value=0.13  Score=36.20  Aligned_cols=35  Identities=23%  Similarity=0.241  Sum_probs=31.3

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .++++|+|+|.+|.-+++.++.+|.+|+++.+.+.
T Consensus        21 p~~vvIiGgG~~G~E~A~~l~~~g~~Vtlve~~~~   55 (115)
T d1lvla2          21 PQHLVVVGGGYIGLELGIAYRKLGAQVSVVEARER   55 (115)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             CCeEEEECCCHHHHHHHHHHhhcccceEEEeeecc
Confidence            47899999999999999999999999999987643

>d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Negative transcriptional regulator NmrA
species: Aspergillus nidulans [TaxId: 162425]

Probab=91.72  E-value=0.35  Score=40.86  Aligned_cols=72  Identities=18%  Similarity=0.207  Sum_probs=48.5

Q ss_pred             CCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchhHH--HHHHhC-CCcEEE-eCCC-HHHHHHhcCCccEEEECC
Q 019199          180 PGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSKKE--EALSLL-GADKFV-VSSD-LEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       180 ~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~~~--~~~~~~-g~~~~v-~~~~-~~~~~~~~~~~dvvid~~  252 (344)
                      ...+|+|+|+ |.+|..++..+...|.+|+++.++.++..  .+ ... |.+.+. |..+ .+.++....+.|.++...
T Consensus         2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~~~~~~~-~~~~~v~~~~gD~~d~~~~~~~a~~~~~~~~~~~   79 (350)
T d1xgka_           2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEEL-QAIPNVTLFQGPLLNNVPLMDTLFEGAHLAFINT   79 (350)
T ss_dssp             CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHH-HTSTTEEEEESCCTTCHHHHHHHHTTCSEEEECC
T ss_pred             CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcchhhhhhh-cccCCCEEEEeeCCCcHHHHHHHhcCCceEEeec
Confidence            4578999998 99999999999999999999998766432  22 233 333322 2222 344555556777776544

>d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Glycerol-3- phosphate dehydrogenase
species: Archaeoglobus fulgidus [TaxId: 2234]

Probab=91.70  E-value=0.19  Score=38.49  Aligned_cols=81  Identities=15%  Similarity=0.064  Sum_probs=52.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhCCC---------cEEEeCCCHHHHHHhcCCccEEEEC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      +|.|+|+|..|.+.+..+...|.+|++..+..++  .+.+. +...         ...+..  .+.+.+...+.|+++.+
T Consensus         2 kI~ViGaG~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~--~~~~~~~~~~ad~Ii~a   78 (180)
T d1txga2           2 IVSILGAGAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFW--PEQLEKCLENAEVVLLG   78 (180)
T ss_dssp             EEEEESCCHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEEC--GGGHHHHHTTCSEEEEC
T ss_pred             EEEEECCCHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccc--cccHHHHHhccchhhcc
Confidence            5789999999999888888888899998875432  33331 2111         000111  12333444679999999


Q ss_pred             CCCchhHHHHHHhccc
Q 019199          252 ASGDHPFDAYMSLLKV  267 (344)
Q Consensus       252 ~g~~~~~~~~~~~l~~  267 (344)
                      +.... ++..++.+++
T Consensus        79 vps~~-~~~~~~~l~~   93 (180)
T d1txga2          79 VSTDG-VLPVMSRILP   93 (180)
T ss_dssp             SCGGG-HHHHHHHHTT
T ss_pred             cchhh-hHHHHHhhcc
Confidence            98765 7777776555

>d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.69  E-value=0.13  Score=36.79  Aligned_cols=34  Identities=12%  Similarity=0.137  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      .++++|+|+|.+|.=++..++.+|.+|+++.+++
T Consensus        22 pk~vvIvGgG~iG~E~A~~l~~~G~~Vtlv~~~~   55 (125)
T d3grsa2          22 PGRSVIVGAGYIAVEMAGILSALGSKTSLMIRHD   55 (125)
T ss_dssp             CSEEEEECCSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCEEEEEcCCccHHHHHHHHhcCCcEEEEEeecc
Confidence            3689999999999999999999999999999874

>d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: YhhF-like
domain: Methyltransferase TTHA0928
species: Thermus thermophilus [TaxId: 274]

Probab=91.69  E-value=0.81  Score=34.42  Aligned_cols=93  Identities=14%  Similarity=0.127  Sum_probs=54.7

Q ss_pred             CCCCCEEEEECC--ChHHHHHHHHHHHCCCeEEEEeCCchhHHHHH---HhCCC-cEEEeCCCHHHHH---HhcCCccEE
Q 019199          178 NQPGKSLGVIGL--GGLGHMAVKFGKAFGLNVTVLSTSTSKKEEAL---SLLGA-DKFVVSSDLEQMK---ALGKSLDFI  248 (344)
Q Consensus       178 ~~~g~~vlI~Ga--g~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~---~~~g~-~~~v~~~~~~~~~---~~~~~~dvv  248 (344)
                      +.+|.+||-.++  |.+|.   ..+ ..|++|+.++.+++..+.++   +..|. +.+..........   .....||+|
T Consensus        39 ~~~g~~vLDl~~G~G~~~i---~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d~~~~~~~~~~~~fD~I  114 (171)
T d1ws6a1          39 YPRRGRFLDPFAGSGAVGL---EAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAKAQGERFTVA  114 (171)
T ss_dssp             CTTCCEEEEETCSSCHHHH---HHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHHHHHHHHHHTTCCEEEE
T ss_pred             ccCCCeEEEeccccchhhh---hhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehhcccccccccCCcccee
Confidence            378889998865  44443   333 35899999998888765542   34554 3444333332222   234679999


Q ss_pred             EECC----CCchhHHHHHH--hcccCCEEEEE
Q 019199          249 IDTA----SGDHPFDAYMS--LLKVAGVYVLV  274 (344)
Q Consensus       249 id~~----g~~~~~~~~~~--~l~~~G~iv~~  274 (344)
                      |--.    +....+..++.  .++++|.++.-
T Consensus       115 f~DPPY~~~~~~~l~~l~~~~ll~~~g~ivie  146 (171)
T d1ws6a1         115 FMAPPYAMDLAALFGELLASGLVEAGGLYVLQ  146 (171)
T ss_dssp             EECCCTTSCTTHHHHHHHHHTCEEEEEEEEEE
T ss_pred             EEccccccCHHHHHHHHHHcCCcCCCeEEEEE
Confidence            7422    22333444443  57888887754

>d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Cystathionine beta-synthase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.68  E-value=1.2  Score=37.69  Aligned_cols=101  Identities=14%  Similarity=0.141  Sum_probs=65.6

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHhCCCcEEEeCCC--------H-------
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLGADKFVVSSD--------L-------  235 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~~~v~~~~--------~-------  235 (344)
                      +.+.++++..|+...+|..|.+++..|+.+|.+.+++...   +++.+.+ +.+|++.+.....        .       
T Consensus        90 ~~g~~~~~~~vv~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i-~~~GA~vv~v~~~~~~~~~~~~~~~~~~~  168 (355)
T d1jbqa_          90 RDGTLKPGDTIIEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVL-RALGAEIVRTPTNARFDSPESHVGVAWRL  168 (355)
T ss_dssp             HHTCSCTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHH-HHTTCEEEECCC-------CCHHHHHHHH
T ss_pred             HcCCcccCceEEEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHH-HhcCCeEEEecccccchhhhhhhhHHHHH
Confidence            3444466777766677999999999999999976655533   3456666 7999876553211        0       


Q ss_pred             ----------------------------HHHHHhcCCccEEEECCCCchhHHH---HHHhcccCCEEEEEc
Q 019199          236 ----------------------------EQMKALGKSLDFIIDTASGDHPFDA---YMSLLKVAGVYVLVG  275 (344)
Q Consensus       236 ----------------------------~~~~~~~~~~dvvid~~g~~~~~~~---~~~~l~~~G~iv~~g  275 (344)
                                                  +.++++...+|.++-++|+..++..   .++...+.-+++.+.
T Consensus       169 ~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~ve  239 (355)
T d1jbqa_         169 KNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVD  239 (355)
T ss_dssp             HHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             HHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeec
Confidence                                        0011123468999999997655444   444456677887664

>d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=91.67  E-value=0.14  Score=36.79  Aligned_cols=36  Identities=19%  Similarity=0.175  Sum_probs=32.4

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +..++++|+|+|.+|.=+++..+.+|.+|+++.+.+
T Consensus        24 ~~p~~vvIiGgG~IG~E~A~~~~~~G~~Vtive~~~   59 (125)
T d1ojta2          24 EVPGKLLIIGGGIIGLEMGTVYSTLGSRLDVVEMMD   59 (125)
T ss_dssp             CCCSEEEEESCSHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred             ccCCeEEEECCCHHHHHHHHHhhcCCCEEEEEEeec
Confidence            456899999999999999999999999999998765

>d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=91.66  E-value=0.096  Score=37.50  Aligned_cols=37  Identities=30%  Similarity=0.283  Sum_probs=32.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      +..++++|+|+|.+|+=+++.++.+|.+|+++.+.+.
T Consensus        23 ~~p~~~viiG~G~iglE~A~~~~~~G~~Vtvi~~~~~   59 (123)
T d1dxla2          23 EIPKKLVVIGAGYIGLEMGSVWGRIGSEVTVVEFASE   59 (123)
T ss_dssp             SCCSEEEESCCSHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred             ccCCeEEEEccchHHHHHHHHHHhcCCeEEEEEEccc
Confidence            4457899999999999999999999999999988754

>d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Activating enzymes of the ubiquitin-like proteins
superfamily: Activating enzymes of the ubiquitin-like proteins
family: Molybdenum cofactor biosynthesis protein MoeB
domain: Molybdenum cofactor biosynthesis protein MoeB
species: Escherichia coli [TaxId: 562]

Probab=91.56  E-value=0.2  Score=40.43  Aligned_cols=34  Identities=32%  Similarity=0.574  Sum_probs=29.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      .+.+|+|+|+|++|..++..+...|. +++++|..
T Consensus        29 ~~~~VliiG~GglGs~va~~La~~Gvg~i~lvD~D   63 (247)
T d1jw9b_          29 KDSRVLIVGLGGLGCAASQYLASAGVGNLTLLDFD   63 (247)
T ss_dssp             HHCEEEEECCSHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred             hCCCEEEECCCHHHHHHHHHHHHcCCCeEEEECCc
Confidence            34789999999999999999999999 88888844

>d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Spermidine synthase
domain: Spermidine synthase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.45  E-value=0.24  Score=41.16  Aligned_cols=94  Identities=21%  Similarity=0.263  Sum_probs=61.2

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCC---------cEEEeCCCHHHHHHhcCCccEEE
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGA---------DKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~---------~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      .-.+|||+|.|. |..+-.+++..+. +|++++-+++-.+.+++-++.         -.++..+....+++..+++|++|
T Consensus        89 ~pk~VLiiGgG~-G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~~~~~~~~~~~~d~rv~v~~~Da~~~l~~~~~~yDvIi  167 (295)
T d1inla_          89 NPKKVLIIGGGD-GGTLREVLKHDSVEKAILCEVDGLVIEAARKYLKQTSCGFDDPRAEIVIANGAEYVRKFKNEFDVII  167 (295)
T ss_dssp             SCCEEEEEECTT-CHHHHHHTTSTTCSEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEESCHHHHGGGCSSCEEEEE
T ss_pred             CCceEEEecCCc-hHHHHHHHhcCCCceEEEecCCHHHHHHHHHHHHhhcccccCCCcEEEhhhHHHHHhcCCCCCCEEE
Confidence            347899998643 4456667776654 899999988877777443421         13444444455555567899986


Q ss_pred             -ECCC----------CchhHHHHHHhcccCCEEEEE
Q 019199          250 -DTAS----------GDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       250 -d~~g----------~~~~~~~~~~~l~~~G~iv~~  274 (344)
                       |...          +.+-++.+.+.|+++|.++.-
T Consensus       168 ~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q  203 (295)
T d1inla_         168 IDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE  203 (295)
T ss_dssp             EEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred             EcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEe
Confidence             4321          123477888999999999865

>d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Caffeoyl-CoA O-methyltransferase
species: Alfalfa (Medicago sativa) [TaxId: 3879]

Probab=91.29  E-value=0.91  Score=35.95  Aligned_cols=98  Identities=20%  Similarity=0.185  Sum_probs=67.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHH---hCCC---cEEEeCCCHHHHHHh------cCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALS---LLGA---DKFVVSSDLEQMKAL------GKS  244 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~---~~g~---~~~v~~~~~~~~~~~------~~~  244 (344)
                      ..-.+||=+|.+ +|+.++.+|+.+  +.+|+.++.+++..+.+++   +.|.   -.++..+..+.+.++      .+.
T Consensus        58 ~~~k~iLEiGT~-~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g~a~~~L~~l~~~~~~~~~  136 (227)
T d1susa1          58 INAKNTMEIGVY-TGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREGPALPVLDEMIKDEKNHGS  136 (227)
T ss_dssp             HTCCEEEEECCG-GGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCGGGTTC
T ss_pred             cCCCcEEEecch-hhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeehHHHHHHHHHHhccccCCc
Confidence            345678889964 589999999887  4599999999987666533   3453   233344555566554      257


Q ss_pred             ccEEE-ECCCC--chhHHHHHHhcccCCEEEEEcCC
Q 019199          245 LDFII-DTASG--DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       245 ~dvvi-d~~g~--~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ||++| |+--.  ...+..+++.|+++|.++.-...
T Consensus       137 fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DNvl  172 (227)
T d1susa1         137 YDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDNTL  172 (227)
T ss_dssp             BSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEETTT
T ss_pred             eeEEEeccchhhhHHHHHHHHhhcCCCcEEEEccCC
Confidence            99987 43332  22477899999999999877554

>d1pzga1 c.2.1.5 (A:14-163) Lactate dehydrogenase {Toxoplasma gondii [TaxId: 5811]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Toxoplasma gondii [TaxId: 5811]

Probab=91.27  E-value=0.13  Score=38.41  Aligned_cols=74  Identities=19%  Similarity=0.128  Sum_probs=46.8

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHh-------CCCc-EEEeCCCHHHHHHhcCCccEEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSL-------LGAD-KFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~-------~g~~-~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      ++..+|.|+|+|.+|..++.++...+. ++..++.++++.+.....       .+.. .+....+.   .+..++.|+|+
T Consensus         5 ~k~~KI~IIGaG~VG~~lA~~l~~~~~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~~~---~~~~~~adiVv   81 (154)
T d1pzga1           5 QRRKKVAMIGSGMIGGTMGYLCALRELADVVLYDVVKGMPEGKALDLSHVTSVVDTNVSVRAEYSY---EAALTGADCVI   81 (154)
T ss_dssp             SCCCEEEEECCSHHHHHHHHHHHHHTCCEEEEECSSSSHHHHHHHHHHHHHHHTTCCCCEEEECSH---HHHHTTCSEEE
T ss_pred             cCCCcEEEECCCHHHHHHHHHHHhCCCceEEEEEeccccchhHHHHHhhhccccCCeeEEeccCch---hhhhcCCCeEE
Confidence            566789999999999888877777775 898998887654332122       2211 11111111   12236799999


Q ss_pred             ECCCCc
Q 019199          250 DTASGD  255 (344)
Q Consensus       250 d~~g~~  255 (344)
                      -+.|.+
T Consensus        82 itag~~   87 (154)
T d1pzga1          82 VTAGLT   87 (154)
T ss_dssp             ECCSCS
T ss_pred             Eecccc
Confidence            888754

>d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: p-Hydroxybenzoate hydroxylase, PHBH
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=91.22  E-value=0.091  Score=43.36  Aligned_cols=33  Identities=21%  Similarity=0.380  Sum_probs=30.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .|+|+|+|..|++++..++..|.+|+++++.++
T Consensus         4 ~V~IvGaGp~Gl~~A~~L~~~G~~v~vlE~~~~   36 (292)
T d1k0ia1           4 QVAIIGAGPSGLLLGQLLHKAGIDNVILERQTP   36 (292)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence            489999999999999999999999999998764

>d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=91.21  E-value=0.38  Score=40.62  Aligned_cols=73  Identities=18%  Similarity=0.053  Sum_probs=47.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch----hHHHHH--HhCCCc-EEEeCCCHHHHHHh--cCCccEEEEC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS----KKEEAL--SLLGAD-KFVVSSDLEQMKAL--GKSLDFIIDT  251 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~----~~~~~~--~~~g~~-~~v~~~~~~~~~~~--~~~~dvvid~  251 (344)
                      +.|||+|+ |.+|..++..+...|.+|+++++...    ......  ..-+.. ...|-.+.+.+.+.  ..++|+||.+
T Consensus         2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~~~~~~~~~~~~~~~~~~~~v~~~~~Dl~d~~~l~~~~~~~~~d~Vihl   81 (347)
T d1z45a2           2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADNLSNSTYDSVARLEVLTKHHIPFYEVDLCDRKGLEKVFKEYKIDSVIHF   81 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTHHHHHHHHHHTSCCCEEECCTTCHHHHHHHHHHSCCCEEEEC
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEECCCCcchhHHHhHHhhcccCCeEEEeecCCHHHHHHHHhccCCCEEEEc
Confidence            46889998 99999999999889999999864221    111111  111222 22344566655554  2579999998


Q ss_pred             CCC
Q 019199          252 ASG  254 (344)
Q Consensus       252 ~g~  254 (344)
                      ++.
T Consensus        82 Aa~   84 (347)
T d1z45a2          82 AGL   84 (347)
T ss_dssp             CSC
T ss_pred             ccc
Confidence            764

>d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=91.18  E-value=0.14  Score=36.48  Aligned_cols=34  Identities=26%  Similarity=0.241  Sum_probs=30.0

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      ..++++|+|+|.+|.=.++.++.+|.+|+++.++
T Consensus        19 ~P~~vvIIGgG~iG~E~A~~l~~lG~~Vtii~~~   52 (122)
T d1h6va2          19 CPGKTLVVGASYVALECAGFLAGIGLDVTVMVRS   52 (122)
T ss_dssp             CCCSEEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             CCCeEEEECCCccHHHHHHHHhhcCCeEEEEEec
Confidence            3357999999999999999999999999999764

>d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Dihydrodipicolinate reductase
species: Thermotoga maritima [TaxId: 2336]

Probab=91.14  E-value=0.52  Score=33.75  Aligned_cols=80  Identities=15%  Similarity=0.173  Sum_probs=44.7

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEE-eCCchhHHHHHHhC-CCcEEEeCCCHHHHHHh-----cCCccEEEECCCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVL-STSTSKKEEALSLL-GADKFVVSSDLEQMKAL-----GKSLDFIIDTASG  254 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~-~~~~~~~~~~~~~~-g~~~~v~~~~~~~~~~~-----~~~~dvvid~~g~  254 (344)
                      +|.|+|+ |.+|++..++++..+.+++.. +.+..      +.+ .+|.++|.+.++...+.     ..+..+|+-++|.
T Consensus         2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~------~~~~~~DVvIDFS~p~~~~~~l~~~~~~~~p~ViGTTG~   75 (128)
T d1vm6a3           2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV------EELDSPDVVIDFSSPEALPKTVDLCKKYRAGLVLGTTAL   75 (128)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE------EECSCCSEEEECSCGGGHHHHHHHHHHHTCEEEECCCSC
T ss_pred             EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH------HHhccCCEEEEecCHHHHHHHHHHHHhcCCCEEEEcCCC
Confidence            5789997 999999999999888876654 33221      111 24555665554332221     1345555555554


Q ss_pred             chhHHHHHHhcccC
Q 019199          255 DHPFDAYMSLLKVA  268 (344)
Q Consensus       255 ~~~~~~~~~~l~~~  268 (344)
                      ...-...++.+...
T Consensus        76 ~~~~~~~i~~~ak~   89 (128)
T d1vm6a3          76 KEEHLQMLRELSKE   89 (128)
T ss_dssp             CHHHHHHHHHHTTT
T ss_pred             CHHHHHHHHHHHhh
Confidence            33233334443333

>d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Pyrobaculum islandicum [TaxId: 2277]

Probab=91.10  E-value=0.25  Score=39.79  Aligned_cols=42  Identities=19%  Similarity=0.322  Sum_probs=34.3

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      +.....--.|.+|+|.|.|.+|..+++++...|++|+.++..
T Consensus        22 ~~~~~~~l~g~~v~IqGfGnVG~~~a~~L~~~Gakvv~vsD~   63 (242)
T d1v9la1          22 AKKLWGGIEGKTVAIQGMGNVGRWTAYWLEKMGAKVIAVSDI   63 (242)
T ss_dssp             HHHHHSCCTTCEEEEECCSHHHHHHHHHHHTTTCEEEEEECS
T ss_pred             HHHcCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEeecc
Confidence            333333257899999999999999999999999999887754

>d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Lysine-specific histone demethylase 1, LSD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.06  E-value=0.14  Score=42.79  Aligned_cols=36  Identities=28%  Similarity=0.414  Sum_probs=31.6

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      ++..+|+|+|+|..|+.++..++..|.+|+++..++
T Consensus         3 ~~~~kViVIGaG~aGL~aA~~L~~~G~~V~VlEa~~   38 (449)
T d2dw4a2           3 KKTGKVIIIGSGVSGLAAARQLQSFGMDVTLLEARD   38 (449)
T ss_dssp             SCCCEEEEECCBHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             CCCCcEEEECCCHHHHHHHHHHHhCCCCEEEEeCCC
Confidence            456679999999999999999999999999998653

>d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: 3-alpha-hydroxysteroid dehydrogenase
species: Comamonas testosteroni [TaxId: 285]

Probab=91.05  E-value=0.13  Score=41.65  Aligned_cols=33  Identities=18%  Similarity=0.255  Sum_probs=28.9

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .|||+|+ +++|.+.++.+...|++|++++++++
T Consensus         3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~   36 (257)
T d1fjha_           3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA   36 (257)
T ss_dssp             EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred             EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence            4688887 99999999999999999999998754

>d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Klebsiella pneumoniae [TaxId: 573]

Probab=90.97  E-value=0.14  Score=43.13  Aligned_cols=35  Identities=17%  Similarity=0.219  Sum_probs=31.1

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      ..+|+|+|||..|+.++..+...|.+|+++..++.
T Consensus         2 ~KKI~IIGaG~sGL~aA~~L~k~G~~V~viEk~~~   36 (314)
T d2bi7a1           2 SKKILIVGAGFSGAVIGRQLAEKGHQVHIIDQRDH   36 (314)
T ss_dssp             CCEEEEECCSHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred             CCEEEEECCcHHHHHHHHHHHhCCCCEEEEECCCC
Confidence            56899999999999999999888999999997753

>d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Polymyxin resistance protein ArnA (PrmI)
species: Escherichia coli [TaxId: 562]

Probab=90.86  E-value=0.14  Score=43.34  Aligned_cols=72  Identities=14%  Similarity=-0.008  Sum_probs=46.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCC-CeEEEEeCCchhHHHHHHhCCCcEEE-eCCCH-HHHHHhcCCccEEEECCCC
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFG-LNVTVLSTSTSKKEEALSLLGADKFV-VSSDL-EQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g-~~V~~~~~~~~~~~~~~~~~g~~~~v-~~~~~-~~~~~~~~~~dvvid~~g~  254 (344)
                      +|||+|+ |.+|..+++.+...| .+|++++....+...+.+.-....+. |-.+. +..+....++|+|+.+++-
T Consensus         2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~~~i~~Di~~~~~~~~~~~~~~d~Vih~a~~   77 (342)
T d2blla1           2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVKKCDVVLPLVAI   77 (342)
T ss_dssp             EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHHHCSEEEECBCC
T ss_pred             EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCeEEEECccCChHHHHHHHHhCCCcccccccc
Confidence            5899998 999999998887778 58999987766554432111222221 21222 3333344579999998774

>d1a5za1 c.2.1.5 (A:22-163) Lactate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=90.83  E-value=2  Score=30.90  Aligned_cols=68  Identities=19%  Similarity=0.238  Sum_probs=41.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC-------CCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL-------GADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~-------g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      +|.|+|+|.+|..++..+...+.  ++..++.++++.+.....+       +...+ ...+.+    ..++.|+++-+.|
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~Di~~~~~~g~~~Dl~~~~~~~~~~~~-~~~~~~----~~~~adivvitag   76 (140)
T d1a5za1           2 KIGIVGLGRVGSSTAFALLMKGFAREMVLIDVDKKRAEGDALDLIHGTPFTRRANI-YAGDYA----DLKGSDVVIVAAG   76 (140)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSCCCEE-EECCGG----GGTTCSEEEECCC
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCCEEEEEecccccccchhccccccccccccccc-cCCcHH----HhcCCCEEEEecc
Confidence            47788999999988777766654  7888888877543221111       11122 111111    1367999999887


Q ss_pred             Cc
Q 019199          254 GD  255 (344)
Q Consensus       254 ~~  255 (344)
                      .+
T Consensus        77 ~~   78 (140)
T d1a5za1          77 VP   78 (140)
T ss_dssp             CC
T ss_pred             cc
Confidence            54

>d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Escherichia coli [TaxId: 562]

Probab=90.54  E-value=0.17  Score=43.34  Aligned_cols=73  Identities=15%  Similarity=0.105  Sum_probs=43.8

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-----hHHHHHHhC---CCcEEE---eCCCHHHHHHhc--CCccE
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-----KKEEALSLL---GADKFV---VSSDLEQMKALG--KSLDF  247 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-----~~~~~~~~~---g~~~~v---~~~~~~~~~~~~--~~~dv  247 (344)
                      +.|||+|+ |.+|..++..+...|.+|+++++...     +.+.+....   .....+   |-.+.+.+.+..  -++|+
T Consensus         2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~d~   81 (357)
T d1db3a_           2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASSFNTERVDHIYQDPHTCNPKFHLHYGDLSDTSNLTRILREVQPDE   81 (357)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC---------------------CCEEECCCCSSCHHHHHHHHHHHCCSE
T ss_pred             CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhhHHHHHhhhhhcCCCeEEEEeecCCHHHHHHHHhccCCCE
Confidence            56889997 99999999999999999999998543     222221111   111111   234555555543  35699


Q ss_pred             EEECCCC
Q 019199          248 IIDTASG  254 (344)
Q Consensus       248 vid~~g~  254 (344)
                      |+.+.+.
T Consensus        82 v~h~aa~   88 (357)
T d1db3a_          82 VYNLGAM   88 (357)
T ss_dssp             EEECCCC
T ss_pred             EEEeecc
Confidence            9998763

>d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Hypothetical protein HI0933
species: Haemophilus influenzae [TaxId: 727]

Probab=90.49  E-value=0.14  Score=41.50  Aligned_cols=33  Identities=24%  Similarity=0.306  Sum_probs=29.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .|+|+|+|+.|++++..+...|.+|.+++.+++
T Consensus         6 DViIIGaG~aGl~aA~~la~~G~~V~vlEk~~~   38 (253)
T d2gqfa1           6 ENIIIGAGAAGLFCAAQLAKLGKSVTVFDNGKK   38 (253)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             cEEEECcCHHHHHHHHHHHHCCCcEEEEecCCC
Confidence            388999999999999988889999999998865

>d2bcgg1 c.3.1.3 (G:5-301) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: GDI-like N domain
domain: Guanine nucleotide dissociation inhibitor, GDI
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=90.43  E-value=0.14  Score=40.48  Aligned_cols=31  Identities=16%  Similarity=0.099  Sum_probs=28.4

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      |+|+|+|..|+.++..+...|.+|.++++++
T Consensus         8 viViGaG~~Gl~~A~~La~~G~~V~vlE~~~   38 (297)
T d2bcgg1           8 VIVLGTGITECILSGLLSVDGKKVLHIDKQD   38 (297)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEcCCC
Confidence            7889999999999999988999999999875

>d1ez4a1 c.2.1.5 (A:16-162) Lactate dehydrogenase {Lactobacillus pentosus [TaxId: 1589]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Lactobacillus pentosus [TaxId: 1589]

Probab=90.38  E-value=0.96  Score=33.07  Aligned_cols=71  Identities=13%  Similarity=0.162  Sum_probs=44.7

Q ss_pred             CCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh-------CCCcEEEeCCCHHHHHHhcCCccEEEEC
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL-------LGADKFVVSSDLEQMKALGKSLDFIIDT  251 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~-------~g~~~~v~~~~~~~~~~~~~~~dvvid~  251 (344)
                      ..+|.|+|+|.+|...+..+...|.  ++..++.++++.+.....       .+...+.. .+.+    ...+.|+++-+
T Consensus         5 ~~KI~IIGaG~VG~~~A~~l~~~~~~~elvL~D~~~~~~~g~a~Dl~~a~~~~~~~~~~~-~d~~----~~~~adivvit   79 (146)
T d1ez4a1           5 HQKVVLVGDGAVGSSYAFAMAQQGIAEEFVIVDVVKDRTKGDALDLEDAQAFTAPKKIYS-GEYS----DCKDADLVVIT   79 (146)
T ss_dssp             BCEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHGGGGGSCCCEEEE-CCGG----GGTTCSEEEEC
T ss_pred             CCEEEEECCCHHHHHHHHHHHhcCCCcEEEEeecccchhHHHHHHHhccccccCCceEee-ccHH----HhccccEEEEe
Confidence            4579999999999998887777663  899999887754322111       12222222 2221    12678999988


Q ss_pred             CCCch
Q 019199          252 ASGDH  256 (344)
Q Consensus       252 ~g~~~  256 (344)
                      +|.+.
T Consensus        80 ag~~~   84 (146)
T d1ez4a1          80 AGAPQ   84 (146)
T ss_dssp             CCC--
T ss_pred             ccccc
Confidence            88653

>d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monooxygenase PhzS
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=90.37  E-value=0.16  Score=41.16  Aligned_cols=33  Identities=24%  Similarity=0.254  Sum_probs=29.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC-eEEEEeCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~  215 (344)
                      .|+|+|+|..|++++.+++..|. +|.++.++++
T Consensus         3 ~V~IvGaG~aGl~~A~~L~~~Gi~~V~V~Er~~~   36 (288)
T d3c96a1           3 DILIAGAGIGGLSCALALHQAGIGKVTLLESSSE   36 (288)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCSEEEEEESSSS
T ss_pred             EEEEECcCHHHHHHHHHHHhCCCCeEEEEeCCCC
Confidence            58999999999999999999997 8888887653

>d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: HI0933 N-terminal domain-like
domain: Flavoprotein BC4706
species: Bacillus cereus [TaxId: 1396]

Probab=90.32  E-value=0.14  Score=41.01  Aligned_cols=32  Identities=34%  Similarity=0.303  Sum_probs=28.6

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      |+|+|+|..|++++..+...|.+|+++++++.
T Consensus         5 ViIIGaG~aGl~aA~~la~~G~~V~liEk~~~   36 (251)
T d2i0za1           5 VIVIGGGPSGLMAAIGAAEEGANVLLLDKGNK   36 (251)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence            78999999999988888889999999998754

>d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Polyamine oxidase
species: Maize (Zea mays) [TaxId: 4577]

Probab=90.30  E-value=0.12  Score=41.42  Aligned_cols=32  Identities=25%  Similarity=0.318  Sum_probs=28.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~  214 (344)
                      +|+|+|+|..|++++..++..|. +|++++.++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~~V~vlE~~~   34 (347)
T d1b5qa1           2 RVIVVGAGMSGISAAKRLSEAGITDLLILEATD   34 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred             CEEEECCcHHHHHHHHHHHhCCCCcEEEEECCC
Confidence            48999999999999999999997 699998764

>d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Thermus aquaticus [TaxId: 271]

Probab=90.06  E-value=0.77  Score=34.53  Aligned_cols=94  Identities=15%  Similarity=0.249  Sum_probs=58.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCch--hHHHHHHhCCC-------c---------------EEEeCCCHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS--KKEEALSLLGA-------D---------------KFVVSSDLEQM  238 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~--~~~~~~~~~g~-------~---------------~~v~~~~~~~~  238 (344)
                      +|.|.|-|.+|..+.+.+...+.+|.++-...+  ....+. ++..       +               .+...+++..+
T Consensus         2 kigINGfGRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~i   80 (168)
T d2g82a1           2 KVGINGFGRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKEI   80 (168)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGGC
T ss_pred             EEEEECCcHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHHC
Confidence            478889999999999888777887777665432  222221 2221       1               01111122222


Q ss_pred             HHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          239 KALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       239 ~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .....++|+|+||+|.-.+.+.+...++.+.+=|.+..+
T Consensus        81 ~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  119 (168)
T d2g82a1          81 PWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAP  119 (168)
T ss_dssp             CTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSC
T ss_pred             cccccCCceeEeccccccchHHhhhhhccccceeeeccc
Confidence            222247999999999877788888888877655555444

>d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Plant O-methyltransferase, C-terminal domain
domain: Aclacinomycin-10-hydroxylase RdmB
species: Streptomyces purpurascens [TaxId: 1924]

Probab=90.02  E-value=0.22  Score=40.46  Aligned_cols=99  Identities=17%  Similarity=0.134  Sum_probs=60.3

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HhCCC-c-EEEeCCCHHHHHHhcCCccEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEAL---SLLGA-D-KFVVSSDLEQMKALGKSLDFI  248 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~---~~~g~-~-~~v~~~~~~~~~~~~~~~dvv  248 (344)
                      .-.+....+||-+|+| .|..+..+++.. +.++++++. ++..+.++   ++.|. + ..+...+  .......++|++
T Consensus        76 ~~d~~~~~~vlDvG~G-~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~d--~~~~~p~~~D~v  151 (256)
T d1qzza2          76 AYDWSAVRHVLDVGGG-NGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEGD--FFKPLPVTADVV  151 (256)
T ss_dssp             TSCCTTCCEEEEETCT-TSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEECC--TTSCCSCCEEEE
T ss_pred             cCCCccCCEEEEECCC-CCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeeee--ccccccccchhh
Confidence            3345777889999975 478899999887 669999986 44333332   23342 2 1111111  111233568988


Q ss_pred             EECCC-----Cc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          249 IDTAS-----GD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       249 id~~g-----~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +-.--     .+   ..++++.+.|+|+|+++.+...
T Consensus       152 ~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~~  188 (256)
T d1qzza2         152 LLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDRA  188 (256)
T ss_dssp             EEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEECC
T ss_pred             hccccccccCcHHHHHHHHHHHhhcCCcceeEEEEec
Confidence            64221     11   2367788899999999988653

>d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glucose-fructose oxidoreductase, N-terminal domain
species: Zymomonas mobilis [TaxId: 542]

Probab=90.00  E-value=0.42  Score=37.76  Aligned_cols=92  Identities=13%  Similarity=0.134  Sum_probs=58.5

Q ss_pred             EEEEECCChHHHH-HHHHHHHC-CCeEE-EEeCCchhHHHHHHhCCCc--EEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          183 SLGVIGLGGLGHM-AVKFGKAF-GLNVT-VLSTSTSKKEEALSLLGAD--KFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       183 ~vlI~Gag~~G~~-ai~~a~~~-g~~V~-~~~~~~~~~~~~~~~~g~~--~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      +|-|+|+|.+|.. .+...+.. +.+++ ++++++++.+.+.+++|..  .+..+.+.+.+-+ ..++|+|+-++....-
T Consensus        35 riaiIG~G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d~~ell~-~~~iD~V~I~tp~~~H  113 (221)
T d1h6da1          35 GYAIVGLGKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSNFDKIAK-DPKIDAVYIILPNSLH  113 (221)
T ss_dssp             EEEEECCSHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSSGGGGGG-CTTCCEEEECSCGGGH
T ss_pred             EEEEEcCcHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCchhhhcc-cccceeeeeccchhhh
Confidence            5778899988863 44444443 66776 5566777877777888742  2333444322111 2569999988887655


Q ss_pred             HHHHHHhcccCCEEEEEcC
Q 019199          258 FDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       258 ~~~~~~~l~~~G~iv~~g~  276 (344)
                      ...+.++++.+ +-+.+.-
T Consensus       114 ~~~~~~al~~g-k~v~~EK  131 (221)
T d1h6da1         114 AEFAIRAFKAG-KHVMCEK  131 (221)
T ss_dssp             HHHHHHHHHTT-CEEEECS
T ss_pred             hhHHHHhhhcc-hhhhcCC
Confidence            77788888765 5556653

>d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains
species: Escherichia coli [TaxId: 562]

Probab=89.85  E-value=0.16  Score=38.60  Aligned_cols=31  Identities=16%  Similarity=0.350  Sum_probs=27.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      .|+|+|+|+.|+.++..+...|.+|.++.+.
T Consensus         3 DViIIGgGpaGl~AAi~aar~G~~v~iie~~   33 (184)
T d1fl2a1           3 DVLIVGSGPAGAAAAIYSARKGIRTGLMGER   33 (184)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEECSS
T ss_pred             cEEEECcCHHHHHHHHHHHHcCCeEEEEEEe
Confidence            4789999999999999999999999999853

>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: COMT domain-containing protein 1, COMTD1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.79  E-value=0.8  Score=36.05  Aligned_cols=98  Identities=17%  Similarity=0.203  Sum_probs=65.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHHHh---CCC---cEEEeCCCHHHHHHh-----cCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEALSL---LGA---DKFVVSSDLEQMKAL-----GKSL  245 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~~~---~g~---~~~v~~~~~~~~~~~-----~~~~  245 (344)
                      ...++||=+|.+ .|+.++.+|+.+  +.+|+.++.+++..+.+++.   .|.   -.++..+..+.+.+.     ...|
T Consensus        58 ~~~k~vLEiGt~-~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~Gda~e~l~~~~~~~~~~~f  136 (219)
T d2avda1          58 IQAKKALDLGTF-TGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETLDELLAAGEAGTF  136 (219)
T ss_dssp             TTCCEEEEECCT-TSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEESCHHHHHHHHHHTTCTTCE
T ss_pred             cCCCeEEEEech-hhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEeehhhcchhhhhhcccCCc
Confidence            455788889974 488899999886  45999999999876665333   352   223333444444443     2569


Q ss_pred             cEEEECCCCc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          246 DFIIDTASGD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       246 dvvid~~g~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      |++|--....   ..+..+++.|+++|.++.-...
T Consensus       137 D~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~l  171 (219)
T d2avda1         137 DVAVVDADKENCSAYYERCLQLLRPGGILAVLRVL  171 (219)
T ss_dssp             EEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECCS
T ss_pred             cEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCCc
Confidence            9987544332   2377899999999999876544

>d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: NADH oxidase /nitrite reductase
species: Pyrococcus furiosus [TaxId: 2261]

Probab=89.74  E-value=0.24  Score=35.18  Aligned_cols=36  Identities=17%  Similarity=0.140  Sum_probs=31.5

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +.+.+++|+|+|.+|.=++..+..+|.+|+++.+.+
T Consensus        30 ~~~~~vvIiGgG~iG~E~A~~l~~~g~~Vtlv~~~~   65 (122)
T d1xhca2          30 ENSGEAIIIGGGFIGLELAGNLAEAGYHVKLIHRGA   65 (122)
T ss_dssp             HHHSEEEEEECSHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred             hcCCcEEEECCcHHHHHHHHHhhcccceEEEEeccc
Confidence            345789999999999999999999999999998764

>d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Virulence factor MviM
species: Escherichia coli [TaxId: 562]

Probab=89.62  E-value=2.3  Score=31.30  Aligned_cols=87  Identities=23%  Similarity=0.253  Sum_probs=57.4

Q ss_pred             EEEEECCChHHHH-HHHHHHHC-CCeEEE-EeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHH
Q 019199          183 SLGVIGLGGLGHM-AVKFGKAF-GLNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFD  259 (344)
Q Consensus       183 ~vlI~Gag~~G~~-ai~~a~~~-g~~V~~-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~  259 (344)
                      ++.|+|+|.+|.- .+...+.. +.+++. .++++++...+.++++...   .+..+.+   ...+|+|+.++.......
T Consensus         3 ri~iIG~G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~---~~~~~~l---~~~~D~V~I~tp~~~h~~   76 (164)
T d1tlta1           3 RIGVVGLGGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY---ADSLSSL---AASCDAVFVHSSTASHFD   76 (164)
T ss_dssp             EEEEECCSTHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB---CSSHHHH---HTTCSEEEECSCTTHHHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc---cccchhh---hhhcccccccccchhccc
Confidence            4788999999864 55555554 667664 5566777777767787542   2233332   256999998888766577


Q ss_pred             HHHHhcccCCEEEEEcC
Q 019199          260 AYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       260 ~~~~~l~~~G~iv~~g~  276 (344)
                      .+..+++.+ +-+.+.-
T Consensus        77 ~~~~al~~g-k~V~~EK   92 (164)
T d1tlta1          77 VVSTLLNAG-VHVCVDK   92 (164)
T ss_dssp             HHHHHHHTT-CEEEEES
T ss_pred             ccccccccc-ceeeccc
Confidence            777777776 4455543

>d1i0za1 c.2.1.5 (A:1-160) Lactate dehydrogenase {Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Human (Homo sapiens), heart isoform (H chain) [TaxId: 9606]

Probab=89.60  E-value=2.7  Score=31.04  Aligned_cols=73  Identities=18%  Similarity=0.244  Sum_probs=47.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC-------CCcEEEeCCCHHHHHHhcCCccEEE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL-------GADKFVVSSDLEQMKALGKSLDFII  249 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~-------g~~~~v~~~~~~~~~~~~~~~dvvi  249 (344)
                      .+..+|.|+|+|.+|..++..+...|.  ++..++.++++.......+       +...++...+.+    ...+.|+|+
T Consensus        18 ~~~~KV~IIGaG~VG~~~A~~l~~~~l~~ElvLiD~~~~~a~g~alDl~h~~~~~~~~~~~~~~d~~----~~~~adiVV   93 (160)
T d1i0za1          18 VPNNKITVVGVGQVGMACAISILGKSLADELALVDVLEDKLKGEMMDLQHGSLFLQTPKIVADKDYS----VTANSKIVV   93 (160)
T ss_dssp             CCSSEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHHHHHHHTGGGCCCSEEEECSSGG----GGTTCSEEE
T ss_pred             CCCCeEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccchhHHHHHHHhccccccCCCeEEeccchh----hcccccEEE
Confidence            456789999999999999999988886  7888888876542221111       222222222221    126789999


Q ss_pred             ECCCCc
Q 019199          250 DTASGD  255 (344)
Q Consensus       250 d~~g~~  255 (344)
                      -+.|.+
T Consensus        94 itAg~~   99 (160)
T d1i0za1          94 VTAGVR   99 (160)
T ss_dssp             ECCSCC
T ss_pred             EecCCc
Confidence            888854

>d1x7da_ c.2.1.13 (A:) Ornithine cyclodeaminase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Ornithine cyclodeaminase
species: Pseudomonas putida [TaxId: 303]

Probab=89.50  E-value=0.2  Score=42.53  Aligned_cols=94  Identities=15%  Similarity=0.160  Sum_probs=62.2

Q ss_pred             CCCCEEEEECCChHHHHHHHHH-HHCCC-eEEEEeCCchhHHHHHHhCCC---cEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFG-KAFGL-NVTVLSTSTSKKEEALSLLGA---DKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a-~~~g~-~V~~~~~~~~~~~~~~~~~g~---~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      +...++.|+|+|..+.+.++.. ..++. +|.+.+++.++.+.+.+.+..   -.+....+   +++..++.|+++-++.
T Consensus       126 ~da~~l~iiG~G~QA~~~~~a~~~v~~i~~V~v~~r~~~~~~~~~~~l~~~~g~~v~~~~s---~~eav~~ADIi~t~Ta  202 (340)
T d1x7da_         126 PNARKMALIGNGAQSEFQALAFHKHLGIEEIVAYDTDPLATAKLIANLKEYSGLTIRRASS---VAEAVKGVDIITTVTA  202 (340)
T ss_dssp             TTCCEEEEECCSTTHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHTTCTTCEEEECSS---HHHHHTTCSEEEECCC
T ss_pred             cCCceEEEEcccHHHHHHHHHHhhhcceeeeEEEecChHHHHHHHHhhhhccCCCceecCC---HHHHHhcCCceeeccc
Confidence            5567888999998888777654 55677 899999998876655444431   12222222   2233467999998775


Q ss_pred             Cc---hhHHHHHHhcccCCEEEEEcCC
Q 019199          254 GD---HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~~---~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.   ..+.  .+.++|+-.+..+|..
T Consensus       203 s~s~~Pv~~--~~~l~pG~hI~aiGs~  227 (340)
T d1x7da_         203 DKAYATIIT--PDMLEPGMHLNAVGGD  227 (340)
T ss_dssp             CSSEEEEEC--GGGCCTTCEEEECSCC
T ss_pred             cCCCCcccc--hhhcCCCCEEeecccc
Confidence            43   1122  2578999999999865

>d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Conserved hypothetical protein MTH1747
species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]

Probab=89.46  E-value=0.42  Score=35.21  Aligned_cols=71  Identities=15%  Similarity=0.103  Sum_probs=45.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDA  260 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~  260 (344)
                      +|-|+|.|.+|.+.+.-+...|.+|++.++...+...+. ..+.... +. ..+    .....|++|-++........
T Consensus         2 kIgiIG~G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~~-~~-~~e----~~~~~diIi~~v~~~~~~~~   72 (152)
T d1i36a2           2 RVGFIGFGEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-ARTVGVT-ET-SEE----DVYSCPVVISAVTPGVALGA   72 (152)
T ss_dssp             EEEEESCSHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-HHHHTCE-EC-CHH----HHHTSSEEEECSCGGGHHHH
T ss_pred             EEEEEcHHHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-hhccccc-cc-HHH----HHhhcCeEEEEecCchHHHH
Confidence            477889999999999999889999988887766544432 2232211 21 111    22347777777776553333

>d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Protoporphyrinogen oxidase
species: Myxococcus xanthus [TaxId: 34]

Probab=89.37  E-value=0.13  Score=41.99  Aligned_cols=32  Identities=22%  Similarity=0.321  Sum_probs=28.9

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +|+|+|+|..|+.++..++..|.+|+++..++
T Consensus         2 ~V~IIGaG~aGL~aA~~L~~~G~~V~vlE~~~   33 (347)
T d2ivda1           2 NVAVVGGGISGLAVAHHLRSRGTDAVLLESSA   33 (347)
T ss_dssp             CEEEECCBHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             eEEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            48999999999999999999999999998763

>d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]

Probab=89.35  E-value=0.18  Score=38.27  Aligned_cols=94  Identities=14%  Similarity=0.258  Sum_probs=60.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCC-c--hhHHHHHHhC----C---CcE-------EE--------eCCCHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS-T--SKKEEALSLL----G---ADK-------FV--------VSSDLEQ  237 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~-~--~~~~~~~~~~----g---~~~-------~v--------~~~~~~~  237 (344)
                      +|-|.|-|.+|..+.+.+...+.+|.++-.. .  +....+. ++    |   .+.       ++        ...+++.
T Consensus         2 kIgINGfGRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p~~   80 (169)
T d1dssg1           2 KIGINGFGRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKPEN   80 (169)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             eEEEECCcHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecCChHH
Confidence            4778899999999999887778877766543 2  3333332 32    2   111       11        1111221


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.....++|+|+||+|.-.+...+...+..+.+-|.+..+
T Consensus        81 i~W~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP  120 (169)
T d1dssg1          81 IPWSKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAP  120 (169)
T ss_dssp             CCHHHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSC
T ss_pred             CCccccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCC
Confidence            1111247999999999877788899999888777777654

>d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit
species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]

Probab=89.30  E-value=0.25  Score=36.99  Aligned_cols=35  Identities=31%  Similarity=0.402  Sum_probs=29.5

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCc
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTST  214 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~  214 (344)
                      .|.+|+|+|+|..|+.++..++..+.  +|++++..+
T Consensus         1 ~gkrivIvGgG~~G~e~A~~l~~~~~~~~Vtlie~~~   37 (186)
T d1fcda1           1 AGRKVVVVGGGTGGATAAKYIKLADPSIEVTLIEPNT   37 (186)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred             CCCcEEEECccHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence            37899999999999999888888774  788887665

>d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Garden pea (Pisum sativum) [TaxId: 3888]

Probab=89.21  E-value=0.18  Score=39.51  Aligned_cols=32  Identities=22%  Similarity=0.289  Sum_probs=28.5

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      -|+|+|+|+.|+.++..+..+|.+|++++..+
T Consensus         5 DvvVIGgGpaGl~aA~~aa~~G~kV~vie~~~   36 (221)
T d1dxla1           5 DVVIIGGGPGGYVAAIKAAQLGFKTTCIEKRG   36 (221)
T ss_dssp             CEEEECCSHHHHHHHHHHHHHTCCEEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            37889999999999999999999999998653

>d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Hypothetical protein TM0312
species: Thermotoga maritima [TaxId: 2336]

Probab=89.19  E-value=2.3  Score=31.95  Aligned_cols=91  Identities=20%  Similarity=0.226  Sum_probs=58.4

Q ss_pred             EEEEECCChHHHH-HHHHHHHCC--CeEEE-EeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          183 SLGVIGLGGLGHM-AVKFGKAFG--LNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       183 ~vlI~Gag~~G~~-ai~~a~~~g--~~V~~-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      ++.|+|+|.+|.. .+...+..+  .++.. .++++++.+.+.++++...++  .+.+.+-+ ...+|+|+-++......
T Consensus         5 rigiIG~G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~--~~~~ell~-~~~id~v~I~tp~~~h~   81 (181)
T d1zh8a1           5 RLGIVGCGIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVF--DSYEELLE-SGLVDAVDLTLPVELNL   81 (181)
T ss_dssp             EEEEECCSHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEE--SCHHHHHH-SSCCSEEEECCCGGGHH
T ss_pred             EEEEEcCCHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhcccccccee--eeeecccc-ccccceeeccccccccc
Confidence            5788999999975 466666543  36664 566666777766778866543  33322211 25699999888876547


Q ss_pred             HHHHHhcccCCEEEEEcCC
Q 019199          259 DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~~  277 (344)
                      ..+..+++.+ +-|.+.-+
T Consensus        82 ~~~~~al~~g-k~V~~EKP   99 (181)
T d1zh8a1          82 PFIEKALRKG-VHVICEKP   99 (181)
T ss_dssp             HHHHHHHHTT-CEEEEESS
T ss_pred             cccccccccc-hhhhcCCC
Confidence            7777777765 55566543

>d1omoa_ c.2.1.13 (A:) Archaeal alanine dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Ornithine cyclodeaminase-like
domain: Archaeal alanine dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=89.17  E-value=0.76  Score=38.51  Aligned_cols=91  Identities=14%  Similarity=0.193  Sum_probs=61.7

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHH-CCC-eEEEEeCCchhHHHHHHh---CCCcEEEeCCCHHHHHHhcCCccEEEECCC
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKA-FGL-NVTVLSTSTSKKEEALSL---LGADKFVVSSDLEQMKALGKSLDFIIDTAS  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~-~g~-~V~~~~~~~~~~~~~~~~---~g~~~~v~~~~~~~~~~~~~~~dvvid~~g  253 (344)
                      +...++.|+|+|..+.+.++.+.. +.. +|.+..+++++.+.+.+.   .+.....+  ..+    ...+.|+|+-++.
T Consensus       123 ~~~~~l~iiGaG~QA~~~~~al~~~~~i~~i~v~~r~~e~~~~~~~~~~~~~~~~~~~--~~~----a~~~aDiV~taT~  196 (320)
T d1omoa_         123 KNSSVFGFIGCGTQAYFQLEALRRVFDIGEVKAYDVREKAAKKFVSYCEDRGISASVQ--PAE----EASRCDVLVTTTP  196 (320)
T ss_dssp             TTCCEEEEECCSHHHHHHHHHHHHHSCCCEEEEECSSHHHHHHHHHHHHHTTCCEEEC--CHH----HHTSSSEEEECCC
T ss_pred             CCccEEEEecCcccHHHHHHHHHHHhhhhhcccccCCHHHHHHHHHHHHhcCCccccc--hhh----hhccccEEEEecc
Confidence            455778889999999887776654 555 899999998876555333   34443322  111    1256999998887


Q ss_pred             Cch-hHHHHHHhcccCCEEEEEcCC
Q 019199          254 GDH-PFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       254 ~~~-~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +.. .+.  .+.++++-.+..+|..
T Consensus       197 s~~P~~~--~~~l~~G~hv~~iGs~  219 (320)
T d1omoa_         197 SRKPVVK--AEWVEEGTHINAIGAD  219 (320)
T ss_dssp             CSSCCBC--GGGCCTTCEEEECSCC
T ss_pred             Ccccccc--hhhcCCCCeEeecCCc
Confidence            533 122  2468999999999875

>d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Escherichia coli [TaxId: 562]

Probab=89.15  E-value=0.2  Score=39.29  Aligned_cols=31  Identities=16%  Similarity=0.290  Sum_probs=28.1

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      -|+|+|+|+.|+.++..|..+|.+|.++...
T Consensus         4 DvvVIG~G~aG~~aA~~a~~~G~kV~iiE~~   34 (217)
T d1gesa1           4 DYIAIGGGSGGIASINRAAMYGQKCALIEAK   34 (217)
T ss_dssp             EEEEECCSHHHHHHHHHHHTTTCCEEEEESS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            3788999999999999999999999999864

>d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=89.09  E-value=0.24  Score=41.28  Aligned_cols=71  Identities=20%  Similarity=0.108  Sum_probs=45.2

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCchh--HHHHHHhCCCc-----EEEeCCCHHHHHHhc--CCccEEEEC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTSK--KEEALSLLGAD-----KFVVSSDLEQMKALG--KSLDFIIDT  251 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~~--~~~~~~~~g~~-----~~v~~~~~~~~~~~~--~~~dvvid~  251 (344)
                      .+|||+|+ |.+|..++..+...|.+|+++++....  ...+ +.++.+     ...|-.+...+.+..  ...++++.+
T Consensus         1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l-~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~~~   79 (321)
T d1rpna_           1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRL-RELGIEGDIQYEDGDMADACSVQRAVIKAQPQEVYNL   79 (321)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHH-HHTTCGGGEEEEECCTTCHHHHHHHHHHHCCSEEEEC
T ss_pred             CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHH-HHhcccCCcEEEEccccChHHhhhhhccccccccccc
Confidence            47999998 999999999998889999999876432  2222 233321     123445555544432  345666665


Q ss_pred             CC
Q 019199          252 AS  253 (344)
Q Consensus       252 ~g  253 (344)
                      ..
T Consensus        80 a~   81 (321)
T d1rpna_          80 AA   81 (321)
T ss_dssp             CS
T ss_pred             cc
Confidence            54

>d1w4xa1 c.3.1.5 (A:10-154,A:390-542) Phenylacetone monooxygenase {Thermobifida fusca [TaxId: 2021]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Phenylacetone monooxygenase
species: Thermobifida fusca [TaxId: 2021]

Probab=89.08  E-value=0.22  Score=41.58  Aligned_cols=33  Identities=27%  Similarity=0.311  Sum_probs=29.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      .|+|+|||..|++++..++..|..|.+++..++
T Consensus         9 dV~IIGAG~sGl~~a~~L~~~G~~v~i~Ek~~~   41 (298)
T d1w4xa1           9 DVLVVGAGFSGLYALYRLRELGRSVHVIETAGD   41 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred             CEEEECccHHHHHHHHHHHhCCCCEEEEEcCCC
Confidence            478899999999999999999999999987654

>d1ne2a_ c.66.1.32 (A:) Hypothetical protein Ta1320 {Archaeon Thermoplasma acidophilum [TaxId: 2303]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Ta1320-like
domain: Hypothetical protein Ta1320
species: Archaeon Thermoplasma acidophilum [TaxId: 2303]

Probab=89.04  E-value=1.4  Score=33.96  Aligned_cols=73  Identities=22%  Similarity=0.223  Sum_probs=47.6

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      ..+. -.|++||-+|+|+ |..++.+ ...|+ +|+.++-+++..+.+++......++..+-    .++.+++|+|+-..
T Consensus        43 ~~~d-l~Gk~VLDlGcGt-G~l~i~a-~~~ga~~V~~vDid~~a~~~ar~N~~~~~~~~~D~----~~l~~~fD~Vi~NP  115 (197)
T d1ne2a_          43 NDGN-IGGRSVIDAGTGN-GILACGS-YLLGAESVTAFDIDPDAIETAKRNCGGVNFMVADV----SEISGKYDTWIMNP  115 (197)
T ss_dssp             HHTS-SBTSEEEEETCTT-CHHHHHH-HHTTBSEEEEEESCHHHHHHHHHHCTTSEEEECCG----GGCCCCEEEEEECC
T ss_pred             HcCC-CCCCEEEEeCCCC-cHHHHHH-HHcCCCcccccccCHHHHHHHHHccccccEEEEeh----hhcCCcceEEEeCc
Confidence            3444 4689999999863 4444443 44676 79999999888888865555334443331    23457899998654


Q ss_pred             C
Q 019199          253 S  253 (344)
Q Consensus       253 g  253 (344)
                      .
T Consensus       116 P  116 (197)
T d1ne2a_         116 P  116 (197)
T ss_dssp             C
T ss_pred             c
Confidence            3

>d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: hypothetical RNA methyltransferase
domain: Hypothetical protein SMu776, middle and C-terminal domains
species: Streptococcus mutans [TaxId: 1309]

Probab=88.89  E-value=1.4  Score=36.82  Aligned_cols=97  Identities=16%  Similarity=0.150  Sum_probs=61.1

Q ss_pred             CCCCCCEEEEECC--ChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC---CC----cEEEeCCCHHHHHHh---cC
Q 019199          177 MNQPGKSLGVIGL--GGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL---GA----DKFVVSSDLEQMKAL---GK  243 (344)
Q Consensus       177 ~~~~g~~vlI~Ga--g~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~----~~~v~~~~~~~~~~~---~~  243 (344)
                      .+.+|++||-..+  |+.+   +..+ ..|+ +|+.++.++...+.+.+.+   |.    ..++..+..+.++..   ..
T Consensus       141 ~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~d~~~~l~~~~~~~~  216 (317)
T d2b78a2         141 GSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVMDVFDYFKYARRHHL  216 (317)
T ss_dssp             TTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEESCHHHHHHHHHHTTC
T ss_pred             HhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEccHHHHHHHHHhhcC
Confidence            3478999998865  4443   3333 3577 7999999988766664332   32    223444445555443   46


Q ss_pred             CccEEE-ECCCC--------------chhHHHHHHhcccCCEEEEEcCC
Q 019199          244 SLDFII-DTASG--------------DHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       244 ~~dvvi-d~~g~--------------~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .||+|| |....              ...+..+++.|+|+|.++.+..+
T Consensus       217 ~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~scs  265 (317)
T d2b78a2         217 TYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTNA  265 (317)
T ss_dssp             CEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEECC
T ss_pred             CCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeCC
Confidence            799987 42211              12356678899999999987655

>d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Enoyl-ACP reductase
species: Oil seed rape (Brassica napus) [TaxId: 3708]

Probab=88.84  E-value=0.27  Score=40.61  Aligned_cols=37  Identities=24%  Similarity=0.231  Sum_probs=31.9

Q ss_pred             CCCCEEEEECC-C--hHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          179 QPGKSLGVIGL-G--GLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Ga-g--~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      -.|+++||+|+ |  ++|.+.++.+...|++|++..++++
T Consensus         6 L~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~   45 (297)
T d1d7oa_           6 LRGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA   45 (297)
T ss_dssp             CTTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred             CCCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence            36889999997 5  7999999999999999998887654

>d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Escherichia coli [TaxId: 562]

Probab=88.79  E-value=0.12  Score=39.69  Aligned_cols=34  Identities=18%  Similarity=0.255  Sum_probs=29.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      ++..|+|+|+|+.|+.++..+..+|.+|+++.+.
T Consensus         4 k~~dVvIIGGGpaGl~AA~~~ar~g~~v~iie~~   37 (190)
T d1trba1           4 KHSKLLILGSGPAGYTAAVYAARANLQPVLITGM   37 (190)
T ss_dssp             EEEEEEEECCSHHHHHHHHHHHTTTCCCEEECCS
T ss_pred             CCCcEEEECCCHHHHHHHHHHHHcCCceEEEEee
Confidence            4567999999999999999999999999999754

>d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Clostridium symbiosum [TaxId: 1512]

Probab=88.52  E-value=0.4  Score=38.87  Aligned_cols=42  Identities=24%  Similarity=0.289  Sum_probs=34.3

Q ss_pred             HHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeC
Q 019199          171 PMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLST  212 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~  212 (344)
                      ++.....--.|.+|+|.|.|.+|..+++++...|++|+.+..
T Consensus        26 ~~~~~~~~l~g~~v~IQGfGnVG~~~a~~L~e~GakvvavsD   67 (255)
T d1bgva1          26 VMKHENDTLVGKTVALAGFGNVAWGAAKKLAELGAKAVTLSG   67 (255)
T ss_dssp             HHHHTTCCSTTCEEEECCSSHHHHHHHHHHHHHTCEEEEEEE
T ss_pred             HHHhCCCCCCCCEEEEECCCHHHHHHHHHHHHcCCeEEEEec
Confidence            344444435789999999999999999999999999987764

>d1llda1 c.2.1.5 (A:7-149) Lactate dehydrogenase {Bifidobacterium longum, strain am101-2 [TaxId: 216816]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Bifidobacterium longum, strain am101-2 [TaxId: 216816]

Probab=88.50  E-value=0.8  Score=33.40  Aligned_cols=70  Identities=20%  Similarity=0.244  Sum_probs=44.7

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh-------CCCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL-------LGADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~-------~g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .+|.|+|+|.+|..++..+...+.  ++..++.++++.+.....       .+...+....+.+    ...+.|+|+-+.
T Consensus         2 ~Ki~IIGaG~VG~~~a~~l~~~~l~~ElvL~D~~~~~~~g~a~Dl~~a~~~~~~~~i~~~~~~~----~~~daDvVVita   77 (143)
T d1llda1           2 TKLAVIGAGAVGSTLAFAAAQRGIAREIVLEDIAKERVEAEVLDMQHGSSFYPTVSIDGSDDPE----ICRDADMVVITA   77 (143)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHTTCCSEEEEECSSHHHHHHHHHHHHHTGGGSTTCEEEEESCGG----GGTTCSEEEECC
T ss_pred             CEEEEECCCHHHHHHHHHHHhcCCCcEEEEEEeccccchhHHHHHHhccccCCCceeecCCCHH----HhhCCcEEEEec
Confidence            358888999999998888877775  788888887764321111       1222232222221    125689999988


Q ss_pred             CCc
Q 019199          253 SGD  255 (344)
Q Consensus       253 g~~  255 (344)
                      |.+
T Consensus        78 G~~   80 (143)
T d1llda1          78 GPR   80 (143)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            864

>d1ryia1 c.3.1.2 (A:1-218,A:307-364) Glycine oxidase ThiO {Bacillus sp. [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Glycine oxidase ThiO
species: Bacillus sp. [TaxId: 1409]

Probab=88.50  E-value=0.24  Score=40.24  Aligned_cols=32  Identities=22%  Similarity=0.212  Sum_probs=28.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      .|+|+|+|.+|++++..+...|.+|+++++.+
T Consensus         6 DvvIIGaGi~Gls~A~~La~~G~~V~vlE~~~   37 (276)
T d1ryia1           6 EAVVIGGGIIGSAIAYYLAKENKNTALFESGT   37 (276)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            48999999999998888888899999999754

>d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TRM1-like
domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1
species: Pyrococcus horikoshii [TaxId: 53953]

Probab=88.39  E-value=0.95  Score=38.78  Aligned_cols=93  Identities=16%  Similarity=0.110  Sum_probs=62.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC---CCc----------------EEEeCCC-HHHHHH
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL---GAD----------------KFVVSSD-LEQMKA  240 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~---g~~----------------~~v~~~~-~~~~~~  240 (344)
                      .+||- +-++.|...+..++..|+ +|++.+-+++-.+.+.+.+   +..                ..++..+ ...+.+
T Consensus        47 ~~vLD-~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~Da~~~~~~  125 (375)
T d2dula1          47 KIVLD-ALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHDDANRLMAE  125 (375)
T ss_dssp             SEEEE-SSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEESCHHHHHHH
T ss_pred             CEEEE-cCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehhhhhhhhHh
Confidence            34433 435568888999998888 8999999988777764332   111                1112222 223444


Q ss_pred             hcCCccEE-EECCCCc-hhHHHHHHhcccCCEEEEEc
Q 019199          241 LGKSLDFI-IDTASGD-HPFDAYMSLLKVAGVYVLVG  275 (344)
Q Consensus       241 ~~~~~dvv-id~~g~~-~~~~~~~~~l~~~G~iv~~g  275 (344)
                      ..+.||+| +|..|++ .-++.++++++.+|.+..+.
T Consensus       126 ~~~~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTa  162 (375)
T d2dula1         126 RHRYFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTA  162 (375)
T ss_dssp             STTCEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEE
T ss_pred             hcCcCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEe
Confidence            45679987 7998874 33899999999999887664

>d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=88.01  E-value=0.28  Score=38.61  Aligned_cols=32  Identities=22%  Similarity=0.323  Sum_probs=28.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      .|+|+|+|+.|+.++..+..+|.+|.+++..+
T Consensus         7 DviVIG~GpAGl~aA~~aa~~G~kV~lie~~~   38 (233)
T d1v59a1           7 DVVIIGGGPAGYVAAIKAAQLGFNTACVEKRG   38 (233)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEEecC
Confidence            47889999999999888888999999998654

>d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Cow (Bos taurus) [TaxId: 9913]

Probab=87.88  E-value=0.34  Score=40.00  Aligned_cols=93  Identities=16%  Similarity=0.248  Sum_probs=58.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC-----------chhHHHHHHhCC-------------------CcE
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS-----------TSKKEEALSLLG-------------------ADK  228 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~-----------~~~~~~~~~~~g-------------------~~~  228 (344)
                      -.|.+|+|.|-|.+|+.+++++...|++|+.++..           .+++.......|                   +|.
T Consensus        34 L~gktvaIqGfGnVG~~~A~~L~e~Gakvv~vsD~~G~i~~~~Gld~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~DI  113 (293)
T d1hwxa1          34 FGDKTFAVQGFGNVGLHSMRYLHRFGAKCVAVGESDGSIWNPDGIDPKELEDFKLQHGTILGFPKAKIYEGSILEVDCDI  113 (293)
T ss_dssp             STTCEEEEECCSHHHHHHHHHHHHTTCEEEEEEETTEEECCTTCCCHHHHHHHHHTTSSSTTCTTSCBCCSCGGGCCCSE
T ss_pred             CCCCEEEEECCCHHHHHHHHHHHHCCCEEEEEEccchhhccccccchHHHHHHHHHcCCeecccccccCCcccccCCccE
Confidence            36789999999999999999999999999887743           233433322222                   111


Q ss_pred             EEeCCCH-----HHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEE
Q 019199          229 FVVSSDL-----EQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       229 ~v~~~~~-----~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~  274 (344)
                      .+.-.-.     +...+  =++.+|++...++. ...+-+.|...|.++.=
T Consensus       114 liPaA~~~~I~~~~a~~--l~ak~I~EgAN~P~-t~eA~~~L~~~gI~viP  161 (293)
T d1hwxa1         114 LIPAASEKQLTKSNAPR--VKAKIIAEGANGPT-TPQADKIFLERNIMVIP  161 (293)
T ss_dssp             EEECSSSSCBCTTTGGG--CCCSEEECCSSSCB-CHHHHHHHHHTTCEEEC
T ss_pred             EeeccccccccHHHHHH--HhhCEEeccCCCCC-CcchHHHHHHCCCEEeC
Confidence            1110000     00001  14678888777775 56677888888866643

>d1hyha1 c.2.1.5 (A:21-166) L-2-hydroxyisocapronate dehydrogenase, L-HICDH {Lactobacillus confusus [TaxId: 1583]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: L-2-hydroxyisocapronate dehydrogenase, L-HICDH
species: Lactobacillus confusus [TaxId: 1583]

Probab=87.87  E-value=1.1  Score=32.83  Aligned_cols=70  Identities=23%  Similarity=0.280  Sum_probs=43.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHh-------CCCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSL-------LGADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~-------~g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .+|.|+|+|.+|..++..+...|.  ++..++.++++.+.....       ++....+...+.+    ...+.|+++-+.
T Consensus         2 kKI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~~~Dl~~a~~~~~~~~~~~~~d~~----~l~~adiVVita   77 (146)
T d1hyha1           2 RKIGIIGLGNVGAAVAHGLIAQGVADDYVFIDANEAKVKADQIDFQDAMANLEAHGNIVINDWA----ALADADVVISTL   77 (146)
T ss_dssp             CEEEEECCSHHHHHHHHHHHHHTCCSEEEEECSSHHHHHHHHHHHHHHGGGSSSCCEEEESCGG----GGTTCSEEEECC
T ss_pred             CeEEEECcCHHHHHHHHHHHhcCCCceEEEEecccchhhhHHHhhhccccccCCccceeccCHH----HhccccEEEEec
Confidence            468889999999988887777664  788888887764222111       1222122222211    126789998888


Q ss_pred             CCc
Q 019199          253 SGD  255 (344)
Q Consensus       253 g~~  255 (344)
                      |.+
T Consensus        78 G~~   80 (146)
T d1hyha1          78 GNI   80 (146)
T ss_dssp             SCG
T ss_pred             ccc
Confidence            754

>d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Putidaredoxin reductase
species: Pseudomonas putida [TaxId: 303]

Probab=87.86  E-value=0.27  Score=37.20  Aligned_cols=32  Identities=16%  Similarity=0.087  Sum_probs=26.9

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEe
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS  211 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~  211 (344)
                      .+++|+|+|+|.+|.-++..++.+|.++.++.
T Consensus         2 ~~~~VvIIGgG~~G~e~A~~l~~~g~~v~v~~   33 (185)
T d1q1ra1           2 ANDNVVIVGTGLAGVEVAFGLRASGWEGNIRL   33 (185)
T ss_dssp             CSCEEEEECCSHHHHHHHHHHHHTTCCSEEEE
T ss_pred             CCCCEEEECCcHHHHHHHHHHHHcCCceEEEE
Confidence            57899999999999999999999998655443

>d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Hypothetical protein PA4017
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=87.80  E-value=0.33  Score=37.78  Aligned_cols=67  Identities=13%  Similarity=-0.015  Sum_probs=42.3

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCCCcEEEeCCCHH-HHHHhcCCccEEEECCCCc
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLGADKFVVSSDLE-QMKALGKSLDFIIDTASGD  255 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~-~~~~~~~~~dvvid~~g~~  255 (344)
                      .+|||+|+ |.+|..++..+...|.  +|++..+++...      . ...-.+..+.. ........+|.|+.++|..
T Consensus         3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~~------~-~~~~~~~~d~~~~~~~~~~~~d~vi~~~g~~   73 (212)
T d2a35a1           3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALAE------H-PRLDNPVGPLAELLPQLDGSIDTAFCCLGTT   73 (212)
T ss_dssp             CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCCC------C-TTEECCBSCHHHHGGGCCSCCSEEEECCCCC
T ss_pred             CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchhh------c-ccccccccchhhhhhccccchheeeeeeeee
Confidence            68999998 9999999998888886  666666543211      0 11111122222 2223346789999998754

>d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: TrmB-like
domain: tRNA (guanine-N(7)-)-methyltransferase TrmB
species: Bacillus subtilis [TaxId: 1423]

Probab=87.77  E-value=4.7  Score=30.91  Aligned_cols=93  Identities=14%  Similarity=0.081  Sum_probs=60.6

Q ss_pred             CCEEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHH---HhCCCc-EEEeCCCH-HHHHHh-cCCccEEEECCC
Q 019199          181 GKSLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEAL---SLLGAD-KFVVSSDL-EQMKAL-GKSLDFIIDTAS  253 (344)
Q Consensus       181 g~~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~---~~~g~~-~~v~~~~~-~~~~~~-~~~~dvvid~~g  253 (344)
                      +..||=+|+|. |..++.+|+.. +..+++++.+......+.   ++.|.+ ..+...+. ...... ...+|.|+-...
T Consensus        30 ~PlvLeIGcG~-G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~Da~~l~~~~~~~~~d~v~i~fp  108 (204)
T d2fcaa1          30 NPIHIEVGTGK-GQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNIDADTLTDVFEPGEVKRVYLNFS  108 (204)
T ss_dssp             CCEEEEECCTT-SHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECCCGGGHHHHCCTTSCCEEEEESC
T ss_pred             CceEEEEEecC-cHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhcccchhhhhcccCchhhhccccccc
Confidence            34456689874 88888999876 569999999888765552   344543 33333332 333333 255787765443


Q ss_pred             Cc--------------hhHHHHHHhcccCCEEEEE
Q 019199          254 GD--------------HPFDAYMSLLKVAGVYVLV  274 (344)
Q Consensus       254 ~~--------------~~~~~~~~~l~~~G~iv~~  274 (344)
                      .+              ..+..+.+.|+|+|.+...
T Consensus       109 ~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~  143 (204)
T d2fcaa1         109 DPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK  143 (204)
T ss_dssp             CCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred             cccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence            32              3578899999999999776

>d1i8ta1 c.4.1.3 (A:1-244,A:314-367) UDP-galactopyranose mutase, N-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: UDP-galactopyranose mutase, N-terminal domain
domain: UDP-galactopyranose mutase, N-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=87.67  E-value=0.24  Score=41.17  Aligned_cols=32  Identities=19%  Similarity=0.254  Sum_probs=28.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      .++|+|||..|+.++..+...|.+|.++..++
T Consensus         3 dv~IIGaG~sGl~~A~~L~~~g~~V~iiEk~~   34 (298)
T d1i8ta1           3 DYIIVGSGLFGAVCANELKKLNKKVLVIEKRN   34 (298)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGTCCEEEECSSS
T ss_pred             cEEEECCcHHHHHHHHHHHhCCCcEEEEECCC
Confidence            47899999999999999988899999999764

>d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Pseudomonas putida [TaxId: 303]

Probab=87.59  E-value=0.26  Score=38.68  Aligned_cols=31  Identities=23%  Similarity=0.290  Sum_probs=28.2

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      .++|+|+|+.|+.++..+..+|.+|.++...
T Consensus         7 DlvVIG~GpaGl~aA~~aa~~G~~V~liE~~   37 (220)
T d1lvla1           7 TLLIIGGGPGGYVAAIRAGQLGIPTVLVEGQ   37 (220)
T ss_dssp             SEEEECCSHHHHHHHHHHHHHTCCEEEECSS
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCcEEEEecC
Confidence            3788999999999999999999999999865

>d2v5za1 c.3.1.2 (A:6-289,A:402-500) Monoamine oxidase B {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Monoamine oxidase B
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.57  E-value=0.26  Score=41.24  Aligned_cols=31  Identities=39%  Similarity=0.414  Sum_probs=28.0

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      |+|+|+|..|++++..++..|.+|++++..+
T Consensus         2 ViVIGaG~aGL~aA~~L~~~G~~V~VlE~~~   32 (383)
T d2v5za1           2 VVVVGGGISGMAAAKLLHDSGLNVVVLEARD   32 (383)
T ss_dssp             EEEECCBHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             EEEECCCHHHHHHHHHHHhCCCCEEEEecCC
Confidence            7889999999999999999999999998654

>d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Bacillus stearothermophilus [TaxId: 1422]

Probab=87.34  E-value=0.34  Score=37.81  Aligned_cols=30  Identities=27%  Similarity=0.326  Sum_probs=27.4

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      |+|+|+|+.|+.++..|...|.+|.++...
T Consensus         6 viVIG~GpaGl~aA~~aar~G~kV~vIEk~   35 (223)
T d1ebda1           6 TLVVGAGPGGYVAAIRAAQLGQKVTIVEKG   35 (223)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecC
Confidence            788899999999999999999999999765

>d2g72a1 c.66.1.15 (A:18-280) Phenylethanolamine N-methyltransferase, PNMTase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Arylamine N-methyltransferase
domain: Phenylethanolamine N-methyltransferase, PNMTase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.33  E-value=0.12  Score=42.29  Aligned_cols=49  Identities=16%  Similarity=0.064  Sum_probs=33.7

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCC
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLG  225 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g  225 (344)
                      .+. ..|.++|-+|+|+ |...+..+.....+|++++-++..++.+++.+.
T Consensus        50 ~g~-~~g~~vLDiGcG~-g~~~~~~~~~~~~~v~~~D~S~~~i~~~~~~~~   98 (263)
T d2g72a1          50 TGE-VSGRTLIDIGSGP-TVYQLLSACSHFEDITMTDFLEVNRQELGRWLQ   98 (263)
T ss_dssp             TSC-SCCSEEEEETCTT-CCGGGTTGGGGCSEEEEECSCHHHHHHHHHHHT
T ss_pred             CCC-CCCcEEEEeccCC-CHHHHHHhcccCCeEEEEeCCHHHHHHHHHHHh
Confidence            344 6789999999965 433333344445589999999998887754443

>d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Neisseria meningitidis [TaxId: 487]

Probab=87.13  E-value=0.35  Score=38.19  Aligned_cols=32  Identities=25%  Similarity=0.234  Sum_probs=28.6

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      -|+|+|+|+.|+.++..+...|.+|.+++..+
T Consensus         8 DviIIG~GPaGlsaA~~aa~~G~~V~viE~~~   39 (229)
T d1ojta1           8 DVVVLGGGPGGYSAAFAAADEGLKVAIVERYK   39 (229)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCeEEEEeccC
Confidence            37889999999999999999999999998654

>d1ojua1 c.2.1.5 (A:22-163) Malate dehydrogenase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Malate dehydrogenase
species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]

Probab=87.10  E-value=3.5  Score=29.63  Aligned_cols=69  Identities=20%  Similarity=0.175  Sum_probs=43.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHH-------HHHhCCC-cEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEE-------ALSLLGA-DKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~-------~~~~~g~-~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      +|.|+|+|.+|...+..+...+.  ++..++.++++.+.       +...++. ..+....+.+    ...+.|+|+-+.
T Consensus         2 KI~IIGaG~VG~~~a~~l~~~~~~~elvL~Di~~~~~~g~alDl~~~~~~~~~~~~i~~~~d~~----~~~~adiVvita   77 (142)
T d1ojua1           2 KLGFVGAGRVGSTSAFTCLLNLDVDEIALVDIAEDLAVGEAMDLAHAAAGIDKYPKIVGGADYS----LLKGSEIIVVTA   77 (142)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHSCCSEEEEECSSHHHHHHHHHHHHHHHHTTTCCCEEEEESCGG----GGTTCSEEEECC
T ss_pred             EEEEECcCHHHHHHHHHHHhcCcCceEEEEecccchhhHHHHHHhhhccccCCCCccccCCCHH----HhccccEEEEec
Confidence            47788999999988887776664  78888888776422       1111222 2333333322    236799999888


Q ss_pred             CCc
Q 019199          253 SGD  255 (344)
Q Consensus       253 g~~  255 (344)
                      |.+
T Consensus        78 g~~   80 (142)
T d1ojua1          78 GLA   80 (142)
T ss_dssp             CCC
T ss_pred             ccc
Confidence            753

>d2ldxa1 c.2.1.5 (A:1-159) Lactate dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=86.77  E-value=1.8  Score=32.09  Aligned_cols=70  Identities=21%  Similarity=0.274  Sum_probs=45.4

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhC-------CCcEEEeCCCHHHHHHhcCCccEEEECC
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLL-------GADKFVVSSDLEQMKALGKSLDFIIDTA  252 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~-------g~~~~v~~~~~~~~~~~~~~~dvvid~~  252 (344)
                      .+|.|+|+|.+|..++..+...+.  ++..++.++++.......+       +...++...+.+    ...+.|+++-+.
T Consensus        20 ~KI~IIGaG~VG~~~A~~l~~~~l~~elvL~D~~~~~a~g~alDl~~~~~~~~~~~~~~~~d~~----~~~~adivvita   95 (159)
T d2ldxa1          20 CKITVVGVGDVGMACAISILLKGLADELALVDADTDKLRGEALDLQHGSLFLSTPKIVFGKDYN----VSANSKLVIITA   95 (159)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTSCSEEEEECSCHHHHHHHHHHHHHTTTTCSCCEEEEESSGG----GGTTEEEEEECC
T ss_pred             CeEEEECCCHHHHHHHHHHHhcCCCCEEEEEeCCchhhhccHHHHhCcchhcCCCeEEeccchh----hhccccEEEEec
Confidence            578899999999999988888775  7888888876542211111       223223222221    126789999888


Q ss_pred             CCc
Q 019199          253 SGD  255 (344)
Q Consensus       253 g~~  255 (344)
                      |.+
T Consensus        96 g~~   98 (159)
T d2ldxa1          96 GAR   98 (159)
T ss_dssp             SCC
T ss_pred             ccc
Confidence            864

>d1y0pa2 c.3.1.4 (A:111-361,A:512-568) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=86.63  E-value=0.35  Score=40.05  Aligned_cols=32  Identities=25%  Similarity=0.380  Sum_probs=28.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      -|+|+|+|..|+.++..|...|++|++++..+
T Consensus        18 DVlVIG~G~aGl~aA~~la~~G~~V~lvEK~~   49 (308)
T d1y0pa2          18 DVVVVGSGGAGFSAAISATDSGAKVILIEKEP   49 (308)
T ss_dssp             SEEEECCSHHHHHHHHHHHHTTCCEEEECSSS
T ss_pred             CEEEECcCHHHHHHHHHHHHCCCcEEEEecCC
Confidence            38999999999999999989999999998654

>d2gf3a1 c.3.1.2 (A:1-217,A:322-385) Sarcosine oxidase {Bacillus sp., strain b0618 [TaxId: 1409]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Sarcosine oxidase
species: Bacillus sp., strain b0618 [TaxId: 1409]

Probab=86.56  E-value=0.36  Score=39.27  Aligned_cols=31  Identities=19%  Similarity=0.217  Sum_probs=27.8

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      |+|+|+|..|++++..+...|.+|+++++.+
T Consensus         6 vvIIGaGi~Gls~A~~La~~G~~V~viE~~~   36 (281)
T d2gf3a1           6 VIVVGAGSMGMAAGYQLAKQGVKTLLVDAFD   36 (281)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            8899999999998888888999999998753

>d1pn0a1 c.3.1.2 (A:1-240,A:342-461) Phenol hydroxylase {Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: Phenol hydroxylase
species: Soil-living yeast (Trichosporon cutaneum) [TaxId: 5554]

Probab=86.33  E-value=0.3  Score=41.07  Aligned_cols=33  Identities=21%  Similarity=0.370  Sum_probs=26.8

Q ss_pred             EEEEECCChHHHHHHHHHH-----HCCCeEEEEeCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGK-----AFGLNVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~-----~~g~~V~~~~~~~~  215 (344)
                      -|+|+|+|..|++++.++.     ..|.+|+++++.+.
T Consensus         9 DV~IvGaG~aGl~lA~~La~~~~~~~G~~v~vlEr~~~   46 (360)
T d1pn0a1           9 DVLIVGAGPAGLMAARVLSEYVRQKPDLKVRIIDKRST   46 (360)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEECSSSS
T ss_pred             CEEEECcCHHHHHHHHHHHhcccccCCCcEEEEcCCCC
Confidence            4899999999998777763     46899999987643

>d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Human(Homo sapiens), liver isoform [TaxId: 9606]

Probab=86.07  E-value=0.65  Score=34.97  Aligned_cols=94  Identities=12%  Similarity=0.202  Sum_probs=58.0

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCeEEEEeCC---chhHHHHHHhC----C---CcEEEe---------------CCCHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTS---TSKKEEALSLL----G---ADKFVV---------------SSDLE  236 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~---~~~~~~~~~~~----g---~~~~v~---------------~~~~~  236 (344)
                      +|.|.|-|.+|..+.+.+... ..++.++-..   .+.+..+. ++    |   .+.-++               .+++.
T Consensus         3 kIgINGFGRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p~   81 (169)
T d1u8fo1           3 KVGVNGFGRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDPS   81 (169)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGG
T ss_pred             EEEEECCcHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEEEEEECCChh
Confidence            578889999999998877654 4577766542   23344442 32    2   111111               11122


Q ss_pred             HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          237 QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+....-++|+|+||+|.-.+...+...+..+.+-|.+..+
T Consensus        82 ~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP  122 (169)
T d1u8fo1          82 KIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAP  122 (169)
T ss_dssp             GCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSC
T ss_pred             hCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccc
Confidence            11111247999999999876688888889888777777654

>d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: Histamine methyltransferase
domain: Histamine methyltransferase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.02  E-value=1.3  Score=35.83  Aligned_cols=97  Identities=15%  Similarity=0.197  Sum_probs=56.3

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHH----C-C--CeEEEEeCCchhHHHHHHhCC-----CcEEEeCC--CHH-HHHHh--
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKA----F-G--LNVTVLSTSTSKKEEALSLLG-----ADKFVVSS--DLE-QMKAL--  241 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~----~-g--~~V~~~~~~~~~~~~~~~~~g-----~~~~v~~~--~~~-~~~~~--  241 (344)
                      +++-+||-+|+|. |.....+++.    . +  .++++++.++..++.+.+.+.     ....++..  ..+ .....  
T Consensus        39 ~~~~~VLDiGcG~-G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  117 (280)
T d1jqea_          39 KSEIKILSIGGGA-GEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKETSSEYQSRMLE  117 (280)
T ss_dssp             CSEEEEEEETCTT-SHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECSCHHHHHHHHTT
T ss_pred             CCCCeEEEEcCCC-CHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhhhhhhhcchhcc
Confidence            4555789899853 4444444332    2 2  367888988887777754432     11222221  111 11111  


Q ss_pred             ---cCCccEEEECCC-----C-chhHHHHHHhcccCCEEEEEcC
Q 019199          242 ---GKSLDFIIDTAS-----G-DHPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       242 ---~~~~dvvid~~g-----~-~~~~~~~~~~l~~~G~iv~~g~  276 (344)
                         ...||+|+-.-.     . ...++.+.+.|+|+|.++....
T Consensus       118 ~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~  161 (280)
T d1jqea_         118 KKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV  161 (280)
T ss_dssp             SSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred             cCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence               267999876332     2 2468899999999999887643

>d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Haemophilus influenzae [TaxId: 727]

Probab=85.94  E-value=4.3  Score=33.25  Aligned_cols=57  Identities=18%  Similarity=0.166  Sum_probs=39.9

Q ss_pred             hccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHhCCCcEEEe
Q 019199          174 RHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLGADKFVV  231 (344)
Q Consensus       174 ~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~~~v~  231 (344)
                      +.+.+.++++|+...+|.-|+++...++.+|.+.+++...   ..+.+.+ +.+|++.+..
T Consensus        54 ~~g~~~~~~~vv~~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~-~~~GA~vv~~  113 (310)
T d1y7la1          54 KDGTLTKGKEIVDATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLL-CGLGVNLVLT  113 (310)
T ss_dssp             HTTSSCTTCEEEESCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHH-HHTTCEEEEE
T ss_pred             HcCCCCCCceeeeecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhH-HHhCCceEec
Confidence            3444567777766677999999999999999965544422   2245555 7899876653

>d1vdca1 c.3.1.5 (A:1-117,A:244-316) Thioredoxin reductase {Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Thioredoxin reductase
species: Mouse-ear cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=85.81  E-value=0.4  Score=36.76  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=28.0

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      ..|+|+|+|..|+.++..+...|.++++++..
T Consensus         6 ~~VvIIGgGpaGl~aA~~~ar~g~~v~vie~~   37 (192)
T d1vdca1           6 TRLCIVGSGPAAHTAAIYAARAELKPLLFEGW   37 (192)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHTTCCCEEECCS
T ss_pred             ceEEEECCCHHHHHHHHHHHHcCCcEEEEEee
Confidence            56899999999999998888899999988744

>d3grsa1 c.3.1.5 (A:18-165,A:291-363) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.71  E-value=0.46  Score=37.01  Aligned_cols=30  Identities=23%  Similarity=0.309  Sum_probs=27.5

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      |+|+|+|+.|+.++..+..+|.+|.+++..
T Consensus         6 viIIG~GpaG~~aA~~aar~G~kV~vIEk~   35 (221)
T d3grsa1           6 YLVIGGGSGGLASARRAAELGARAAVVESH   35 (221)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCEEEEEecc
Confidence            778899999999999999999999999764

>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Trimethylamine dehydrogenase, C-terminal domain
species: Methylophilus methylotrophus, w3a1 [TaxId: 17]

Probab=85.64  E-value=0.87  Score=33.41  Aligned_cols=47  Identities=19%  Similarity=0.058  Sum_probs=37.2

Q ss_pred             HhHHHHHhccCCCCCCEEEEE--CCChHHHHHHHHHHHCCCeEEEEeCCch
Q 019199          167 TVYTPMMRHKMNQPGKSLGVI--GLGGLGHMAVKFGKAFGLNVTVLSTSTS  215 (344)
Q Consensus       167 ta~~~l~~~~~~~~g~~vlI~--Gag~~G~~ai~~a~~~g~~V~~~~~~~~  215 (344)
                      |....+. .. ..++..++|+  |+|-+|+-+++.+..+|.+|+++.+.+.
T Consensus        27 t~~d~l~-~~-~~~~~~vvi~d~ggg~ig~e~A~~la~~G~~Vtlv~~~~~   75 (156)
T d1djqa2          27 TPEQVMD-GK-KKIGKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHL   75 (156)
T ss_dssp             CHHHHHH-TC-SCCCSEEEEEECCCSSHHHHHHHHHHHTTCEEEEEESSCT
T ss_pred             CHHHHhc-Cc-cccCCceEEEecCCChHHHHHHHHHHHcCCeEEEEecCCc
Confidence            4455543 33 3788888887  7799999999999999999999997753

>d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: C-terminal domain of adrenodoxin reductase-like
domain: Dihydropyrimidine dehydrogenase, domain 3
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=85.30  E-value=0.76  Score=33.93  Aligned_cols=36  Identities=14%  Similarity=0.092  Sum_probs=29.9

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCc
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTST  214 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~  214 (344)
                      ..+++|+|+|+|-+|.=++..+..+|+ +|+++.+.+
T Consensus        43 ~~~~kVvVIGGGdtA~D~A~~a~r~GA~~V~vi~rr~   79 (153)
T d1gtea3          43 SIRGAVIVLGAGDTAFDCATSALRCGARRVFLVFRKG   79 (153)
T ss_dssp             CCCSEEEEECSSHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred             cCCCEEEEECCChhHHHHHHHHHHcCCcceeEEEeCC
Confidence            457789999999999998988888998 577877654

>d2nvwa1 c.2.1.3 (A:2-154,A:374-457) Galactose/lactose metabolism regulatory protein GAL80 {Yeast (Kluyveromyces lactis) [TaxId: 28985]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Galactose/lactose metabolism regulatory protein GAL80
species: Yeast (Kluyveromyces lactis) [TaxId: 28985]

Probab=85.22  E-value=1.4  Score=34.96  Aligned_cols=95  Identities=13%  Similarity=0.212  Sum_probs=58.6

Q ss_pred             CEEEEECCCh----HHHHHHHHHHHC--CCeEEE-EeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          182 KSLGVIGLGG----LGHMAVKFGKAF--GLNVTV-LSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       182 ~~vlI~Gag~----~G~~ai~~a~~~--g~~V~~-~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      =+|.|+|+|.    ++...+...+..  +.++.+ .+++.++.+.+.++++....-.+.+.+.+-+ ...+|+|+.++..
T Consensus        17 irvgiIG~G~~~~~~~~~h~~ai~~~~~~~~ivav~d~~~~~~~~~~~~~~~~~~~~~~~~~~l~~-~~~iD~V~i~tp~   95 (237)
T d2nvwa1          17 IRVGFVGLTSGKSWVAKTHFLAIQQLSSQFQIVALYNPTLKSSLQTIEQLQLKHATGFDSLESFAQ-YKDIDMIVVSVKV   95 (237)
T ss_dssp             EEEEEECCCSTTSHHHHTHHHHHHHTTTTEEEEEEECSCHHHHHHHHHHTTCTTCEEESCHHHHHH-CTTCSEEEECSCH
T ss_pred             eEEEEEecCccccHHHHHHHHHHHhcCCCeEEEEEEcCCHHHHHHHHHhcccccceeecchhhccc-ccccceeeccCCC
Confidence            4578889865    344444444443  457775 5566667777667887543333444433322 2579999999987


Q ss_pred             chhHHHHHHhcccC-----CEEEEEcCC
Q 019199          255 DHPFDAYMSLLKVA-----GVYVLVGFP  277 (344)
Q Consensus       255 ~~~~~~~~~~l~~~-----G~iv~~g~~  277 (344)
                      ....+.+..+|..+     ++-|++.-+
T Consensus        96 ~~h~~~~~~al~aG~~~~~~k~V~~EKP  123 (237)
T d2nvwa1          96 PEHYEVVKNILEHSSQNLNLRYLYVEWA  123 (237)
T ss_dssp             HHHHHHHHHHHHHSSSCSSCCEEEEESS
T ss_pred             cchhhHHHHHHHhcccccCCceEEEecc
Confidence            66577777777654     456677544

>d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=84.90  E-value=1.3  Score=33.09  Aligned_cols=94  Identities=16%  Similarity=0.193  Sum_probs=57.0

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCeEEEEeCC---chhHHHHHHhCC-------CcE-------EE--------eCCCHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTS---TSKKEEALSLLG-------ADK-------FV--------VSSDLE  236 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~---~~~~~~~~~~~g-------~~~-------~v--------~~~~~~  236 (344)
                      +|-|.|-|.+|.++.+.+... ..+|.++-..   .+....+. ++-       .+.       ++        ..+++.
T Consensus         2 kigINGfGRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p~   80 (166)
T d2b4ro1           2 KLGINGFGRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDPS   80 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSGG
T ss_pred             eEEEECCCHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCCChH
Confidence            477889999999998887654 3466666432   23333332 321       111       11        112222


Q ss_pred             HHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          237 QMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       237 ~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      .+....-++|+|+||+|.-.+...+...+..+.+-|.+..+
T Consensus        81 ~i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP  121 (166)
T d2b4ro1          81 QIPWGKCQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAP  121 (166)
T ss_dssp             GCCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred             HccccccCCCEEEEecccccchhhhhhhhccCCCEEEEecc
Confidence            21111237999999999877688888899888766666544

>d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Aminoacid dehydrogenase-like, C-terminal domain
domain: Glutamate dehydrogenase
species: Thermotoga maritima [TaxId: 2336]

Probab=84.87  E-value=1.1  Score=35.73  Aligned_cols=41  Identities=22%  Similarity=0.367  Sum_probs=32.2

Q ss_pred             HHhccCCCCCCEEEEECCChHHHHHHHHH-HHCCCeEEEEeC
Q 019199          172 MMRHKMNQPGKSLGVIGLGGLGHMAVKFG-KAFGLNVTVLST  212 (344)
Q Consensus       172 l~~~~~~~~g~~vlI~Gag~~G~~ai~~a-~~~g~~V~~~~~  212 (344)
                      +...+.--.|.+|+|.|.|.+|..+++++ +..|++|+.++.
T Consensus        22 ~~~~~~~l~g~~vaIqG~GnVG~~~a~~L~~e~Ga~vv~vsd   63 (234)
T d1b26a1          22 MDVLGIDPKKATVAVQGFGNVGQFAALLISQELGSKVVAVSD   63 (234)
T ss_dssp             HHHTTCCTTTCEEEEECCSHHHHHHHHHHHHHHCCEEEEEEE
T ss_pred             HHHcCCCcCCCEEEEECCCHHHHHHHHHHHHhcCCceEEeec
Confidence            44444335789999999999999999887 678999987764

>d2gv8a1 c.3.1.5 (A:3-180,A:288-444) Flavin-dependent monoxygenase SPBP16F5.08c {Schizosaccharomyces pombe [TaxId: 4896]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Flavin-dependent monoxygenase SPBP16F5.08c
species: Schizosaccharomyces pombe [TaxId: 4896]

Probab=84.87  E-value=0.49  Score=39.72  Aligned_cols=34  Identities=26%  Similarity=0.272  Sum_probs=27.2

Q ss_pred             CEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCch
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTS  215 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~  215 (344)
                      .+|+|+|+|..|++++..++..|  .+|++..++++
T Consensus         5 KrVaIIGaG~sGl~~A~~L~~~~~~~~v~vfEk~~~   40 (335)
T d2gv8a1           5 RKIAIIGAGPSGLVTAKALLAEKAFDQVTLFERRGS   40 (335)
T ss_dssp             CEEEEECCSHHHHHHHHHHHTTTCCSEEEEECSSSS
T ss_pred             CeEEEECcCHHHHHHHHHHHHhCCCCCEEEEECCCC
Confidence            47999999999998887665554  48999998753

>d3lada1 c.3.1.5 (A:1-158,A:278-348) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Dihydrolipoamide dehydrogenase
species: Azotobacter vinelandii [TaxId: 354]

Probab=84.79  E-value=0.47  Score=36.96  Aligned_cols=30  Identities=27%  Similarity=0.341  Sum_probs=27.3

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      |+|+|+|+-|+.++..|...|.+|.+++..
T Consensus         6 viIIGgGpAGl~aA~~aar~G~~V~viE~~   35 (229)
T d3lada1           6 VIVIGAGPGGYVAAIKSAQLGLKTALIEKY   35 (229)
T ss_dssp             EEEECCSHHHHHHHHHHHHHTCCEEEEECC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCeEEEEecc
Confidence            788899999999999999999999999864

>d1h6va1 c.3.1.5 (A:10-170,A:293-366) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Mammalian thioredoxin reductase
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=84.75  E-value=0.41  Score=37.76  Aligned_cols=31  Identities=35%  Similarity=0.331  Sum_probs=27.8

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      -|+|+|+|+-|+.++..|..+|.+|.+++..
T Consensus         5 DviVIG~GpaGl~aA~~aa~~G~kV~viE~~   35 (235)
T d1h6va1           5 DLIIIGGGSGGLAAAKEAAKFDKKVMVLDFV   35 (235)
T ss_dssp             EEEEECCSHHHHHHHHHHGGGCCCEEEECCC
T ss_pred             CEEEECCCHHHHHHHHHHHHCCCeEEEEecc
Confidence            4788999999999999999999999999844

>d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=84.72  E-value=0.58  Score=39.05  Aligned_cols=73  Identities=19%  Similarity=0.149  Sum_probs=46.0

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCCch-----hHHHH---HHhCC-C-cEE--EeCCCHHHHHHh--cCCcc
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTSTS-----KKEEA---LSLLG-A-DKF--VVSSDLEQMKAL--GKSLD  246 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~~-----~~~~~---~~~~g-~-~~~--v~~~~~~~~~~~--~~~~d  246 (344)
                      .++||+|+ |.+|..++..+...|.+|+++++...     +.+.+   ..... . ...  .|..+.+.+.+.  ..++|
T Consensus         2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Di~~~~~~~~~~~~~~~D   81 (339)
T d1n7ha_           2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSNFNTQRINHIYIDPHNVNKALMKLHYADLTDASSLRRWIDVIKPD   81 (339)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCTTTTTTC--------CCEEEEECCTTCHHHHHHHHHHHCCS
T ss_pred             CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECCCcccchhhhhhhhhhhhhccccceEEEEccccCHHHHHHHHhhhccc
Confidence            57899998 99999999999999999999997532     22111   01111 1 111  133344444432  25789


Q ss_pred             EEEECCCC
Q 019199          247 FIIDTASG  254 (344)
Q Consensus       247 vvid~~g~  254 (344)
                      +|+.+++.
T Consensus        82 ~Vih~Aa~   89 (339)
T d1n7ha_          82 EVYNLAAQ   89 (339)
T ss_dssp             EEEECCSC
T ss_pred             hhhhcccc
Confidence            99998875

>d1vlma_ c.66.1.41 (A:) Possible histamine N-methyltransferase TM1293 {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: UbiE/COQ5-like
domain: Possible histamine N-methyltransferase TM1293
species: Thermotoga maritima [TaxId: 2336]

Probab=84.66  E-value=0.32  Score=37.75  Aligned_cols=89  Identities=19%  Similarity=0.174  Sum_probs=56.1

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCC-----
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTAS-----  253 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g-----  253 (344)
                      .++.+||-+|+|. |..+..+     .+++.++.+++.++.++ +.+...+ ..... .+....+.+|+|+..-.     
T Consensus        35 ~~~~~vLDiGcG~-G~~~~~~-----~~~~giD~s~~~~~~a~-~~~~~~~-~~d~~-~l~~~~~~fD~I~~~~~l~h~~  105 (208)
T d1vlma_          35 LPEGRGVEIGVGT-GRFAVPL-----KIKIGVEPSERMAEIAR-KRGVFVL-KGTAE-NLPLKDESFDFALMVTTICFVD  105 (208)
T ss_dssp             CCSSCEEEETCTT-STTHHHH-----TCCEEEESCHHHHHHHH-HTTCEEE-ECBTT-BCCSCTTCEEEEEEESCGGGSS
T ss_pred             CCCCeEEEECCCC-ccccccc-----ceEEEEeCChhhccccc-ccccccc-ccccc-cccccccccccccccccccccc
Confidence            5667899999863 4444443     35789999998888884 5454332 22111 11111256999976432     


Q ss_pred             Cc-hhHHHHHHhcccCCEEEEEcC
Q 019199          254 GD-HPFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       254 ~~-~~~~~~~~~l~~~G~iv~~g~  276 (344)
                      .+ ..++++.+.|+|+|+++....
T Consensus       106 d~~~~l~~~~~~L~pgG~l~i~~~  129 (208)
T d1vlma_         106 DPERALKEAYRILKKGGYLIVGIV  129 (208)
T ss_dssp             CHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred             ccccchhhhhhcCCCCceEEEEec
Confidence            21 247888999999999987754

>d1qo8a2 c.3.1.4 (A:103-359,A:506-565) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella frigidimarina [TaxId: 56812]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella frigidimarina [TaxId: 56812]

Probab=84.57  E-value=0.42  Score=39.84  Aligned_cols=33  Identities=27%  Similarity=0.356  Sum_probs=28.6

Q ss_pred             CEEEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      --|+|+|+|..|+.++..|...|++|++++..+
T Consensus        20 ~DVvVIGaG~aGl~AA~~aa~~G~~V~vlEK~~   52 (317)
T d1qo8a2          20 TQVLVVGAGSAGFNASLAAKKAGANVILVDKAP   52 (317)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHTCCEEEECSSS
T ss_pred             cCEEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            347889999999999988988999999998653

>d1y6ja1 c.2.1.5 (A:7-148) Lactate dehydrogenase {Clostridium thermocellum [TaxId: 1515]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Clostridium thermocellum [TaxId: 1515]

Probab=84.09  E-value=1.1  Score=32.55  Aligned_cols=69  Identities=17%  Similarity=0.134  Sum_probs=39.7

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC--eEEEEeCCchhHHHHHHhCC-C-----cEEEeCCCHHHHHHhcCCccEEEECCCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL--NVTVLSTSTSKKEEALSLLG-A-----DKFVVSSDLEQMKALGKSLDFIIDTASG  254 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~--~V~~~~~~~~~~~~~~~~~g-~-----~~~v~~~~~~~~~~~~~~~dvvid~~g~  254 (344)
                      +|.|+|+|.+|...+..+...+.  ++..++.++++.+....++- +     ...+...+.    +...+.|+++-+.|.
T Consensus         3 KI~IIGaG~VG~~~a~~l~~~~l~~el~L~D~~~~~~~g~a~Dl~~~~~~~~~~~~~~~~~----~~~~~adivvitag~   78 (142)
T d1y6ja1           3 KVAIIGAGFVGASAAFTMALRQTANELVLIDVFKEKAIGEAMDINHGLPFMGQMSLYAGDY----SDVKDCDVIVVTAGA   78 (142)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCSSEEEEECCC---CCHHHHHHTTSCCCTTCEEEC--CG----GGGTTCSEEEECCCC
T ss_pred             eEEEECCCHHHHHHHHHHHhcCCCCEEEEEeccCCccceeeeeeccCcccCCCeeEeeCcH----HHhCCCceEEEeccc
Confidence            57788999999998888877765  78899977765321111221 1     111111111    123678999998875


Q ss_pred             c
Q 019199          255 D  255 (344)
Q Consensus       255 ~  255 (344)
                      +
T Consensus        79 ~   79 (142)
T d1y6ja1          79 N   79 (142)
T ss_dssp             -
T ss_pred             c
Confidence            4

>d1cjca2 c.4.1.1 (A:6-106,A:332-460) Adrenodoxin reductase of mitochondrial p450 systems {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Adrenodoxin reductase of mitochondrial p450 systems
species: Cow (Bos taurus) [TaxId: 9913]

Probab=83.87  E-value=0.57  Score=36.83  Aligned_cols=33  Identities=15%  Similarity=0.186  Sum_probs=27.0

Q ss_pred             EEEEECCChHHHHHHHHHHH--CCCeEEEEeCCch
Q 019199          183 SLGVIGLGGLGHMAVKFGKA--FGLNVTVLSTSTS  215 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~--~g~~V~~~~~~~~  215 (344)
                      +|+|+|+|+.|+.++..++.  .|.+|++++..+.
T Consensus         3 kv~iIGaGpaGl~aA~~L~~~~~~~~V~v~e~~~~   37 (230)
T d1cjca2           3 QICVVGSGPAGFYTAQHLLKHHSRAHVDIYEKQLV   37 (230)
T ss_dssp             EEEEECCSHHHHHHHHHHHHHCSSCEEEEECSSSS
T ss_pred             eEEEECccHHHHHHHHHHHhcCCCCeEEEEeCCCC
Confidence            68999999999999886654  4779999987754

>d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Diaminopimelic acid dehydrogenase (DAPDH)
species: Corynebacterium glutamicum [TaxId: 1718]

Probab=83.63  E-value=1.4  Score=32.94  Aligned_cols=83  Identities=10%  Similarity=0.113  Sum_probs=53.5

Q ss_pred             EEEEECCChHHHHHHHHHHHC-CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPFDAY  261 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~~~~  261 (344)
                      +|.|+|+|.+|...+...+.. +.+++.+.....+.  . +..+   .....+.   ......+|+|+.+++...-...+
T Consensus         5 rvgiiG~G~ig~~~~~~l~~~~~~elvav~~~~~~~--~-~~~~---~~~~~~~---~~~~~~~D~Vvi~tp~~~h~~~a   75 (170)
T d1f06a1           5 RVAIVGYGNLGRSVEKLIAKQPDMDLVGIFSRRATL--D-TKTP---VFDVADV---DKHADDVDVLFLCMGSATDIPEQ   75 (170)
T ss_dssp             EEEEECCSHHHHHHHHHHTTCSSEEEEEEEESSSCC--S-SSSC---EEEGGGG---GGTTTTCSEEEECSCTTTHHHHH
T ss_pred             eEEEECChHHHHHHHHHHHhCCCcEEEEEEeccccc--c-cccc---cccchhh---hhhccccceEEEeCCCcccHHHH
Confidence            578999999998888777765 45666554433221  1 1111   2222221   12235699999999876658899


Q ss_pred             HHhcccCCEEEEE
Q 019199          262 MSLLKVAGVYVLV  274 (344)
Q Consensus       262 ~~~l~~~G~iv~~  274 (344)
                      .++|+.|-.++.+
T Consensus        76 ~~aL~aG~~vv~~   88 (170)
T d1f06a1          76 APKFAQFACTVDT   88 (170)
T ss_dssp             HHHHTTTSEEECC
T ss_pred             HHHHHCCCcEEEe
Confidence            9999998887654

>d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Escherichia coli [TaxId: 562]

Probab=83.34  E-value=0.78  Score=34.37  Aligned_cols=94  Identities=13%  Similarity=0.182  Sum_probs=57.3

Q ss_pred             EEEEECCChHHHHHHHHHHHCC-CeEEEEeCCch--hHHHHHHhC----C---CcE-------EE--------eCCCHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFG-LNVTVLSTSTS--KKEEALSLL----G---ADK-------FV--------VSSDLEQ  237 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g-~~V~~~~~~~~--~~~~~~~~~----g---~~~-------~v--------~~~~~~~  237 (344)
                      +|.|.|-|.+|..+.+.+.... .+|.++-...+  .+..+. ++    |   .+.       ++        ..+++..
T Consensus         3 kigINGFGRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p~~   81 (166)
T d1gado1           3 KVGINGFGRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDPAN   81 (166)
T ss_dssp             EEEEECCSHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSGGG
T ss_pred             EEEEECCcHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCChHH
Confidence            4678899999999998887664 46666655433  222221 22    2   111       11        1112222


Q ss_pred             HHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          238 MKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       238 ~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +....-++|+|+||+|.-.+...+...+..+.+-|.+..+
T Consensus        82 i~W~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP  121 (166)
T d1gado1          82 LKWDEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGP  121 (166)
T ss_dssp             GCHHHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSC
T ss_pred             CCccccCCCEEEEccccccCHHHHHHHhcCCCceEEeecc
Confidence            1111247999999999877788888899888766666554

>d1t2da1 c.2.1.5 (A:1-150) Lactate dehydrogenase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: LDH N-terminal domain-like
domain: Lactate dehydrogenase
species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]

Probab=83.23  E-value=1.5  Score=32.09  Aligned_cols=72  Identities=17%  Similarity=0.106  Sum_probs=45.3

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCC-eEEEEeCCchhHHHHHHhC-------CCc-EEEeCCCHHHHHHhcCCccEEEE
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTSTSKKEEALSLL-------GAD-KFVVSSDLEQMKALGKSLDFIID  250 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~~~~~~~~~~~~-------g~~-~~v~~~~~~~~~~~~~~~dvvid  250 (344)
                      |..+|-|+|+|.+|.....++...+. ++..++.++++.+.....+       +.. .+....+.    +...+.|+++-
T Consensus         2 p~~KI~IIGaG~VG~~~a~~l~~~~l~el~L~Di~~~~~~g~a~Dl~~~~~~~~~~~~v~~~~~~----~~~~~advvvi   77 (150)
T d1t2da1           2 PKAKIVLVGSGMIGGVMATLIVQKNLGDVVLFDIVKNMPHGKALDTSHTNVMAYSNCKVSGSNTY----DDLAGADVVIV   77 (150)
T ss_dssp             CCCEEEEECCSHHHHHHHHHHHHTTCCEEEEECSSSSHHHHHHHHHHTHHHHHTCCCCEEEECCG----GGGTTCSEEEE
T ss_pred             CCCeEEEECCCHHHHHHHHHHHhCCCCeEEEEeccCCcceeeecchhhhccccCCCcEEEecccc----cccCCCcEEEE
Confidence            45689999999999988888887777 8888888776543221111       111 11111111    12367899998


Q ss_pred             CCCCc
Q 019199          251 TASGD  255 (344)
Q Consensus       251 ~~g~~  255 (344)
                      +.|.+
T Consensus        78 tag~~   82 (150)
T d1t2da1          78 TAGFT   82 (150)
T ss_dssp             CCSCS
T ss_pred             ecccc
Confidence            88754

>d1d4ca2 c.3.1.4 (A:103-359,A:506-570) Flavocytochrome c3 (respiratory fumarate reductase) {Shewanella putrefaciens [TaxId: 24]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Flavocytochrome c3 (respiratory fumarate reductase)
species: Shewanella putrefaciens [TaxId: 24]

Probab=83.19  E-value=0.54  Score=39.18  Aligned_cols=31  Identities=29%  Similarity=0.432  Sum_probs=27.9

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      |+|+|+|..|+.++..+...|++|++++..+
T Consensus        26 VvVIG~G~aGl~aA~~la~~G~~V~llEk~~   56 (322)
T d1d4ca2          26 VVIIGSGGAGLAAAVSARDAGAKVILLEKEP   56 (322)
T ss_dssp             EEEECSSHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred             EEEECcCHHHHHHHHHHHHCCCcEEEEeCCC
Confidence            8999999999999888888999999998654

>d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: GDP-mannose 4,6-dehydratase
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.11  E-value=0.6  Score=39.11  Aligned_cols=32  Identities=19%  Similarity=0.267  Sum_probs=28.3

Q ss_pred             EE-EEECC-ChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          183 SL-GVIGL-GGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       183 ~v-lI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      +| ||+|+ |.+|..++..+...|++|+++++..
T Consensus         2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~   35 (347)
T d1t2aa_           2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS   35 (347)
T ss_dssp             CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred             CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence            46 89998 9999999999988999999999854

>d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain
species: Escherichia coli [TaxId: 562]

Probab=83.10  E-value=3.6  Score=33.47  Aligned_cols=97  Identities=18%  Similarity=0.171  Sum_probs=58.8

Q ss_pred             CCCCCEEEEECC--ChHHHHHHHHHHHC-CCeEEEEeCCchhHHHH---HHhCCCc-EEEeCCCHHHHHH-hcCCccEEE
Q 019199          178 NQPGKSLGVIGL--GGLGHMAVKFGKAF-GLNVTVLSTSTSKKEEA---LSLLGAD-KFVVSSDLEQMKA-LGKSLDFII  249 (344)
Q Consensus       178 ~~~g~~vlI~Ga--g~~G~~ai~~a~~~-g~~V~~~~~~~~~~~~~---~~~~g~~-~~v~~~~~~~~~~-~~~~~dvvi  249 (344)
                      .++|++||-.-|  |+=..   +++..+ +.+|++.+.+..|+..+   .+.+|.. .++...+...... ....||.|+
T Consensus       100 ~~~g~~vLD~CAaPGgKt~---~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~~~~~~~~~~~fd~IL  176 (284)
T d1sqga2         100 PQNGEHILDLCAAPGGKTT---HILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGRYPSQWCGEQQFDRIL  176 (284)
T ss_dssp             CCTTCEEEEESCTTCHHHH---HHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTTCTHHHHTTCCEEEEE
T ss_pred             ccccceeEeccCccccchh---hhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeeccccccchhcccccccEEE
Confidence            389999998743  53333   333333 35899999999987554   3456754 3333333222222 235698875


Q ss_pred             -E--CCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          250 -D--TASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       250 -d--~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                       |  |+|..                         ..+..+++.++++|++|..-++
T Consensus       177 ~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYsTCS  232 (284)
T d1sqga2         177 LDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYATCS  232 (284)
T ss_dssp             EECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEEESC
T ss_pred             EeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEeeec
Confidence             6  55532                         2355777789999999876544

>d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: MraW-like putative methyltransferases
domain: TM0872, methyltransferase domain
species: Thermotoga maritima [TaxId: 2336]

Probab=83.07  E-value=3.6  Score=31.32  Aligned_cols=100  Identities=16%  Similarity=0.113  Sum_probs=58.7

Q ss_pred             CCCCCCEEEEECCChHHHHHHHHHHH-CCCeEEEEeCCchhHHHHHHhC---CCcEEEeCCCHHH----HHHh-cCCccE
Q 019199          177 MNQPGKSLGVIGLGGLGHMAVKFGKA-FGLNVTVLSTSTSKKEEALSLL---GADKFVVSSDLEQ----MKAL-GKSLDF  247 (344)
Q Consensus       177 ~~~~g~~vlI~Gag~~G~~ai~~a~~-~g~~V~~~~~~~~~~~~~~~~~---g~~~~v~~~~~~~----~~~~-~~~~dv  247 (344)
                      .+++|+.++-.++|.=|.+. .+++. -+.+|++++.+++.++.+.+.+   +....+.......    +... ...+|.
T Consensus        20 ~~~~~~~~lD~t~G~Gghs~-~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~~~~~~~~~~~~~~vdg   98 (192)
T d1m6ya2          20 KPEDEKIILDCTVGEGGHSR-AILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYREADFLLKTLGIEKVDG   98 (192)
T ss_dssp             CCCTTCEEEETTCTTSHHHH-HHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGGGHHHHHHHTTCSCEEE
T ss_pred             CCCCCCEEEEecCCCcHHHH-HHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHhhHHHHHHHcCCCCcce
Confidence            34788877665444434443 44444 3679999999999888775443   3332222222222    2222 267888


Q ss_pred             EEECCCC-c--------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          248 IIDTASG-D--------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       248 vid~~g~-~--------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      ++--.|- .              ..+..+.+.|+++|+++.+.+.
T Consensus        99 Il~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~  143 (192)
T d1m6ya2          99 ILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH  143 (192)
T ss_dssp             EEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred             eeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence            7432332 1              2356777788999999877544

>d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH)
species: Achromobacter xylosoxidans [TaxId: 85698]

Probab=83.05  E-value=1.8  Score=32.59  Aligned_cols=94  Identities=9%  Similarity=0.092  Sum_probs=55.7

Q ss_pred             EEEEECCChHHHHHHHHHHHC--C--CeEEEEeCCch--hHHHHHHhCC-------CcE---------------EEeCCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAF--G--LNVTVLSTSTS--KKEEALSLLG-------ADK---------------FVVSSD  234 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~--g--~~V~~~~~~~~--~~~~~~~~~g-------~~~---------------~v~~~~  234 (344)
                      +|.|.|-|.+|..+.+.+-..  .  ..|.++-...+  .+..+. ++.       ...               ++..++
T Consensus         3 kigINGfGRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~~   81 (173)
T d1obfo1           3 RVAINGYGRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANRN   81 (173)
T ss_dssp             EEEEECCSHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCSC
T ss_pred             EEEEECCcHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecCC
Confidence            477889999999988876542  2  35555553322  222221 221       111               111112


Q ss_pred             HHHHHHhcCCccEEEECCCCchhHHHHHHhcccCCEEEEEcCC
Q 019199          235 LEQMKALGKSLDFIIDTASGDHPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       235 ~~~~~~~~~~~dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                      +..+....-++|+|+||+|.-.+...+.+.|..+.+-|.+..+
T Consensus        82 p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP  124 (173)
T d1obfo1          82 PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAP  124 (173)
T ss_dssp             GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSC
T ss_pred             HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecC
Confidence            2222222358999999999766688888999888777777654

>d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: UDP-N-acetylglucosamine 4-epimerase WbpP
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=82.98  E-value=0.57  Score=39.30  Aligned_cols=41  Identities=15%  Similarity=0.105  Sum_probs=32.6

Q ss_pred             HHHhccCCCCCCEEEEECC-ChHHHHHHHHHHHCCCeEEEEeC
Q 019199          171 PMMRHKMNQPGKSLGVIGL-GGLGHMAVKFGKAFGLNVTVLST  212 (344)
Q Consensus       171 ~l~~~~~~~~g~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~  212 (344)
                      -+.+... ..-.++||+|+ |.+|..++..+...|.+|+++++
T Consensus         7 ~~~~~~~-~~~k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~   48 (341)
T d1sb8a_           7 ELRKELP-AQPKVWLITGVAGFIGSNLLETLLKLDQKVVGLDN   48 (341)
T ss_dssp             HHHHHHH-HSCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred             HHHHhCC-CCCCEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence            3444333 34467999998 99999999999999999999985

>d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: Threonine deaminase
species: Escherichia coli [TaxId: 562]

Probab=82.96  E-value=3.3  Score=34.39  Aligned_cols=106  Identities=12%  Similarity=0.139  Sum_probs=65.6

Q ss_pred             HHHHHhccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCC---chhHHHHHHhCCCcEEEeCCCHHHHH------
Q 019199          169 YTPMMRHKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTS---TSKKEEALSLLGADKFVVSSDLEQMK------  239 (344)
Q Consensus       169 ~~~l~~~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~---~~~~~~~~~~~g~~~~v~~~~~~~~~------  239 (344)
                      ++.+.....-.+..+|+...+|..|.+++..++..|.+++++...   .++.+.+ +.+|++.++...+.+...      
T Consensus        63 ~~~i~~~~~~~~~~~vv~assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l-~~~Ga~vi~~~~~~~~~~~~~~~~  141 (331)
T d1tdja1          63 YAMMAGLTEEQKAHGVITASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAV-RGFGGEVLLHGANFDEAKAKAIEL  141 (331)
T ss_dssp             HHHHHTTTTSSCSSSCEEEECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHH-HHHSCEEECCCSSHHHHHHHHHHH
T ss_pred             HHHHHHHHHhCCCCeeeecccchhHHHHHHhhccccccceeeccccchhHHHHHH-HhcCCEEEEcCcccccchhhhhhh
Confidence            444444443234455666666888999999999999976665533   2345555 789988665444321110      


Q ss_pred             -----------------------------HhcCCccEEEECCCCchhHH---HHHHhcccCCEEEEEc
Q 019199          240 -----------------------------ALGKSLDFIIDTASGDHPFD---AYMSLLKVAGVYVLVG  275 (344)
Q Consensus       240 -----------------------------~~~~~~dvvid~~g~~~~~~---~~~~~l~~~G~iv~~g  275 (344)
                                                   +..+.+|++|-++|+..++.   ..++.+.+..+++.+.
T Consensus       142 ~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve  209 (331)
T d1tdja1         142 SQQQGFTWVPPFDHPMVIAGQGTLALELLQQDAHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVE  209 (331)
T ss_dssp             HHHHCCEECCSSCCHHHHHHHHHHHHHHHHHCTTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             hhcCCCccccccCChHHhhhhhhHHHHHHHhcCCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEec
Confidence                                         00246899999998765444   4444556677888664

>d1lqta2 c.4.1.1 (A:2-108,A:325-456) Ferredoxin:NADP reductase FprA {Mycobacterium tuberculosis [TaxId: 1773]}

class: Alpha and beta proteins (a/b)
fold: Nucleotide-binding domain
superfamily: Nucleotide-binding domain
family: N-terminal domain of adrenodoxin reductase-like
domain: Ferredoxin:NADP reductase FprA
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=82.92  E-value=0.43  Score=37.54  Aligned_cols=34  Identities=15%  Similarity=0.160  Sum_probs=27.9

Q ss_pred             CEEEEECCChHHHHHHHHHHHCC-------CeEEEEeCCch
Q 019199          182 KSLGVIGLGGLGHMAVKFGKAFG-------LNVTVLSTSTS  215 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~a~~~g-------~~V~~~~~~~~  215 (344)
                      -+|+|+|+|+.|++++..+...|       .+|++.+..+.
T Consensus         3 ~~VaVIGaGpaGL~aA~~L~~~G~~~~~~~~~V~v~E~~~~   43 (239)
T d1lqta2           3 YYIAIVGSGPSAFFAAASLLKAADTTEDLDMAVDMLEMLPT   43 (239)
T ss_dssp             EEEEEECCSHHHHHHHHHHHHHHHHSTTCCEEEEEEESSSS
T ss_pred             cEEEEECcCHHHHHHHHHHHHcCCccccCCCceEEEecCCC
Confidence            37999999999999998877666       57999987653

>d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: COMT-like
domain: Catechol O-methyltransferase, COMT
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=82.66  E-value=2.1  Score=33.29  Aligned_cols=93  Identities=14%  Similarity=0.169  Sum_probs=56.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHC--CCeEEEEeCCchhHHHHH---HhCCCc---EEEeCCCHHHHHHh-----cCCcc
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAF--GLNVTVLSTSTSKKEEAL---SLLGAD---KFVVSSDLEQMKAL-----GKSLD  246 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~--g~~V~~~~~~~~~~~~~~---~~~g~~---~~v~~~~~~~~~~~-----~~~~d  246 (344)
                      ...+||=+|.+ .|..++.+|+++  +.+|+.++.+++..+.++   +..|..   .++..+..+.+.++     ...+|
T Consensus        56 kpk~ILEiGt~-~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~Gd~~e~l~~l~~~~~~~~~D  134 (214)
T d2cl5a1          56 SPSLVLELGAY-CGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNGASQDLIPQLKKKYDVDTLD  134 (214)
T ss_dssp             CCSEEEEECCT-TSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEESCHHHHGGGHHHHSCCCCEE
T ss_pred             CCCEEEEEccC-chhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeeccccccccchhhcccccccc
Confidence            33678888974 477888888876  569999999988665553   334531   23333333333332     25689


Q ss_pred             EEEECCCCch-----hHHHHHHhcccCCEEEE
Q 019199          247 FIIDTASGDH-----PFDAYMSLLKVAGVYVL  273 (344)
Q Consensus       247 vvid~~g~~~-----~~~~~~~~l~~~G~iv~  273 (344)
                      ++|--.....     .+...++.|+|+|.++.
T Consensus       135 ~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~  166 (214)
T d2cl5a1         135 MVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA  166 (214)
T ss_dssp             EEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred             eeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence            8864333221     13445667999986653

>d2bs2a2 c.3.1.4 (A:1-250,A:372-457) Fumarate reductase {Wolinella succinogenes [TaxId: 844]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Succinate dehydrogenase/fumarate reductase flavoprotein N-terminal domain
domain: Fumarate reductase
species: Wolinella succinogenes [TaxId: 844]

Probab=82.64  E-value=0.59  Score=39.03  Aligned_cols=31  Identities=35%  Similarity=0.217  Sum_probs=27.9

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCCc
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTST  214 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~  214 (344)
                      |+|+|+|..|+.++.-|...|++|+++....
T Consensus         8 VvVIG~G~AGl~AAl~aa~~G~~V~liEK~~   38 (336)
T d2bs2a2           8 SLVIGGGLAGLRAAVATQQKGLSTIVLSLIP   38 (336)
T ss_dssp             EEEECCSHHHHHHHHHHHTTTCCEEEECSSC
T ss_pred             EEEECcCHHHHHHHHHHHHCCCCEEEEecCC
Confidence            8899999999999999988999999998654

>d1onfa1 c.3.1.5 (A:1-153,A:271-376) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Glutathione reductase
species: Plasmodium falciparum [TaxId: 5833]

Probab=82.57  E-value=0.73  Score=37.04  Aligned_cols=30  Identities=30%  Similarity=0.310  Sum_probs=27.5

Q ss_pred             EEEECCChHHHHHHHHHHHCCCeEEEEeCC
Q 019199          184 LGVIGLGGLGHMAVKFGKAFGLNVTVLSTS  213 (344)
Q Consensus       184 vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~  213 (344)
                      |+|+|+|+.|+.++..|...|.+|.+++..
T Consensus         4 viVIG~G~aG~~aA~~aa~~G~~V~liE~~   33 (259)
T d1onfa1           4 LIVIGGGSGGMAAARRAARHNAKVALVEKS   33 (259)
T ss_dssp             EEEECCSHHHHHHHHHHHHTTCCEEEEESS
T ss_pred             EEEECCCHHHHHHHHHHHHCCCeEEEEecC
Confidence            678899999999999999999999999864

>d1rp0a1 c.3.1.6 (A:7-284) Thiazole biosynthetic enzyme Thi4 {Thale cress(Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: Thi4-like
domain: Thiazole biosynthetic enzyme Thi4
species: Thale cress(Arabidopsis thaliana) [TaxId: 3702]

Probab=82.52  E-value=0.63  Score=37.89  Aligned_cols=33  Identities=24%  Similarity=0.318  Sum_probs=27.2

Q ss_pred             CEEEEECCChHHHHHHHH-HHHCCCeEEEEeCCc
Q 019199          182 KSLGVIGLGGLGHMAVKF-GKAFGLNVTVLSTST  214 (344)
Q Consensus       182 ~~vlI~Gag~~G~~ai~~-a~~~g~~V~~~~~~~  214 (344)
                      ..|+|+|+|..|++++.. ++..|.+|.+++..+
T Consensus        34 ~DViVIGaGpaGL~aA~~LA~~~G~~V~vlE~~~   67 (278)
T d1rp0a1          34 TDVVVVGAGSAGLSAAYEISKNPNVQVAIIEQSV   67 (278)
T ss_dssp             EEEEEECCSHHHHHHHHHHHTSTTSCEEEEESSS
T ss_pred             CCEEEECCCHHHHHHHHHHHHccCCeEEEEecCC
Confidence            448999999999987654 566799999999775

>d1pj5a2 c.3.1.2 (A:4-219,A:339-427) N,N-dimethylglycine oxidase {Arthrobacter globiformis [TaxId: 1665]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD-linked reductases, N-terminal domain
domain: N,N-dimethylglycine oxidase
species: Arthrobacter globiformis [TaxId: 1665]

Probab=82.42  E-value=0.69  Score=37.95  Aligned_cols=31  Identities=29%  Similarity=0.326  Sum_probs=26.0

Q ss_pred             EEEEECCChHHHHHHHHHHHCCC-eEEEEeCC
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGL-NVTVLSTS  213 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~-~V~~~~~~  213 (344)
                      .|+|+|+|.+|++++..+...|. +|++++++
T Consensus         3 dViIIGaGi~G~s~A~~La~~G~~~V~liE~~   34 (305)
T d1pj5a2           3 RIVIIGAGIVGTNLADELVTRGWNNITVLDQG   34 (305)
T ss_dssp             CEEEECCSHHHHHHHHHHHHTTCCCEEEECSS
T ss_pred             CEEEECcCHHHHHHHHHHHHcCCCcEEEEeCC
Confidence            48999999999988777777887 69999865

>d1p3ha_ b.35.1.1 (A:) Chaperonin-10 (GroES) {Mycobacterium tuberculosis [TaxId: 1773]}

class: All beta proteins
fold: GroES-like
superfamily: GroES-like
family: GroES
domain: Chaperonin-10 (GroES)
species: Mycobacterium tuberculosis [TaxId: 1773]

Probab=81.75  E-value=1  Score=30.50  Aligned_cols=24  Identities=29%  Similarity=0.205  Sum_probs=18.8

Q ss_pred             cceEEEEecCCCC----------CCCCCCEEEEe
Q 019199           71 IVGIVKEVGHNVS----------RFKVGDHVGVG   94 (344)
Q Consensus        71 ~~G~V~~~G~~~~----------~~~~Gd~V~~~   94 (344)
                      ..|+|+++|+...          .+++||+|++.
T Consensus        38 ~~G~VvavG~g~~~~~~~~~~~~~vk~GD~Vl~~   71 (99)
T d1p3ha_          38 QEGTVVAVGPGRWDEDGEKRIPLDVAEGDTVIYS   71 (99)
T ss_dssp             EEEEEEEECCCEECSSSSCEECCSCCTTCEEEEE
T ss_pred             eEEEEEEECCceEcCCCCEecCCeeecCCEEEEc
Confidence            4699999998642          37899999753

>d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Salmonella typhimurium [TaxId: 90371]

Probab=81.67  E-value=11  Score=30.22  Aligned_cols=55  Identities=22%  Similarity=0.233  Sum_probs=37.7

Q ss_pred             ccCCCCCCEEEEECCChHHHHHHHHHHHCCCeEEEEe--CCch-hHHHHHHhCCCcEEE
Q 019199          175 HKMNQPGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLS--TSTS-KKEEALSLLGADKFV  230 (344)
Q Consensus       175 ~~~~~~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~--~~~~-~~~~~~~~~g~~~~v  230 (344)
                      .+.++++.+|+..++|.-|.+++..++.+|.+.+++.  ..++ +...+ +.+|++.+.
T Consensus        55 ~g~~~~~~~vv~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~-~~~ga~v~~  112 (302)
T d1fcja_          55 RGVLKPGVELVEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLL-KALGANLVL  112 (302)
T ss_dssp             HTCCCTTCEEEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHH-HHTTCEEEE
T ss_pred             cCCCCCCceEEEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHH-HHhccceEE
Confidence            3444777777666779999999999999998654443  2233 44444 788877554

>d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Tyrosine-dependent oxidoreductases
domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.48  E-value=0.82  Score=38.32  Aligned_cols=71  Identities=20%  Similarity=0.079  Sum_probs=45.1

Q ss_pred             CEEEEECC-ChHHHHHHHHHHHCCCeEEEEeCC----------chhHHHHHHhC--CCcEEE--eCCCHHHHHHhc--CC
Q 019199          182 KSLGVIGL-GGLGHMAVKFGKAFGLNVTVLSTS----------TSKKEEALSLL--GADKFV--VSSDLEQMKALG--KS  244 (344)
Q Consensus       182 ~~vlI~Ga-g~~G~~ai~~a~~~g~~V~~~~~~----------~~~~~~~~~~~--g~~~~v--~~~~~~~~~~~~--~~  244 (344)
                      ++|||+|+ |.+|..++..+...|.+|+++++.          .++.... +.+  .--.++  |-.+.+.+.+..  ..
T Consensus         3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~l~~~~~~~~   81 (346)
T d1ek6a_           3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRV-QELTGRSVEFEEMDILDQGALQRLFKKYS   81 (346)
T ss_dssp             SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHH-HHHHTCCCEEEECCTTCHHHHHHHHHHCC
T ss_pred             CeEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCccccccccchHHHHHH-HHhcCCCcEEEEeeccccccccccccccc
Confidence            68999998 999999999999999999998631          1222222 111  111222  445555555542  55


Q ss_pred             ccEEEECCC
Q 019199          245 LDFIIDTAS  253 (344)
Q Consensus       245 ~dvvid~~g  253 (344)
                      .++++.+++
T Consensus        82 ~~~i~h~Aa   90 (346)
T d1ek6a_          82 FMAVIHFAG   90 (346)
T ss_dssp             EEEEEECCS
T ss_pred             ccccccccc
Confidence            677777665

>d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Alpha and beta proteins (a/b)
fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes
superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes
family: Tryptophan synthase beta subunit-like PLP-dependent enzymes
domain: O-acetylserine sulfhydrylase (Cysteine synthase)
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=81.28  E-value=9  Score=31.39  Aligned_cols=100  Identities=14%  Similarity=0.128  Sum_probs=61.4

Q ss_pred             ccCCCCCCEEEE-ECCChHHHHHHHHHHHCCCeEEEEeC--C-chhHHHHHHhCCCcEEEeCCCHH--------------
Q 019199          175 HKMNQPGKSLGV-IGLGGLGHMAVKFGKAFGLNVTVLST--S-TSKKEEALSLLGADKFVVSSDLE--------------  236 (344)
Q Consensus       175 ~~~~~~g~~vlI-~Gag~~G~~ai~~a~~~g~~V~~~~~--~-~~~~~~~~~~~g~~~~v~~~~~~--------------  236 (344)
                      .+.++.+...+| ..+|..|++.+..++.+|.+.+++..  . ..+.+.+ +.+|++.++......              
T Consensus        58 ~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i-~~~Ga~vi~~~~~~~~~~~~~~~~~~~~~  136 (320)
T d1z7wa1          58 KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIIL-LAFGVELVLTDPAKGMKGAIAKAEEILAK  136 (320)
T ss_dssp             TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHH-HHTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhh-hccCcceEEeeccccccccchhHHHHHHh
Confidence            344455555555 45699999999999999996555442  2 3355555 789987655432110              


Q ss_pred             ---------------H-----------HHHhcCCccEEEECCCCchhHHH---HHHhcccCCEEEEEc
Q 019199          237 ---------------Q-----------MKALGKSLDFIIDTASGDHPFDA---YMSLLKVAGVYVLVG  275 (344)
Q Consensus       237 ---------------~-----------~~~~~~~~dvvid~~g~~~~~~~---~~~~l~~~G~iv~~g  275 (344)
                                     .           ..+..+.+|.++-++|+..++.-   .++...+.-+++-+.
T Consensus       137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve  204 (320)
T d1z7wa1         137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVE  204 (320)
T ss_dssp             CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred             CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeeccc
Confidence                           0           01112468999998887654444   344456677777554

>d1dlja2 c.2.1.6 (A:1-196) UDP-glucose dehydrogenase (UDPGDH) {Streptococcus pyogenes [TaxId: 1314]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: UDP-glucose dehydrogenase (UDPGDH)
species: Streptococcus pyogenes [TaxId: 1314]

Probab=81.27  E-value=1.1  Score=34.25  Aligned_cols=37  Identities=22%  Similarity=0.228  Sum_probs=31.4

Q ss_pred             EEEEECCChHHHHHHHHHHHCCCeEEEEeCCchhHHHH
Q 019199          183 SLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSKKEEA  220 (344)
Q Consensus       183 ~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~~~~~  220 (344)
                      +|.|+|.|-+|+..+..+ +.|.+|+++|-++++.+.+
T Consensus         2 kI~ViGlG~vGl~~a~~~-a~g~~V~g~Din~~~v~~l   38 (196)
T d1dlja2           2 KIAVAGSGYVGLSLGVLL-SLQNEVTIVDILPSKVDKI   38 (196)
T ss_dssp             EEEEECCSHHHHHHHHHH-TTTSEEEEECSCHHHHHHH
T ss_pred             EEEEECCChhHHHHHHHH-HCCCcEEEEECCHHHHHHH
Confidence            478889999999877655 5699999999999988777

>d1np3a2 c.2.1.6 (A:1-182) Class I ketol-acid reductoisomerase (KARI) {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: 6-phosphogluconate dehydrogenase-like, N-terminal domain
domain: Class I ketol-acid reductoisomerase (KARI)
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=81.18  E-value=5.8  Score=29.59  Aligned_cols=86  Identities=23%  Similarity=0.243  Sum_probs=59.4

Q ss_pred             CCCEEEEECCChHHHHHHHHHHHCCCeEEEEeCCchh-HHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          180 PGKSLGVIGLGGLGHMAVKFGKAFGLNVTVLSTSTSK-KEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       180 ~g~~vlI~Gag~~G~~ai~~a~~~g~~V~~~~~~~~~-~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      ++.+|.|+|-|+=|.+.++-+|-.|.+|++--+...+ .+.+ ++-|.+..       .+.+.....|++.-.+.... -
T Consensus        15 k~k~IaViGYGsQG~AhAlNLrDSG~~V~VGLr~gs~s~~~A-~~~Gf~v~-------~~~eA~~~aDiim~L~PD~~-q   85 (182)
T d1np3a2          15 QGKKVAIIGYGSQGHAHACNLKDSGVDVTVGLRSGSATVAKA-EAHGLKVA-------DVKTAVAAADVVMILTPDEF-Q   85 (182)
T ss_dssp             HTSCEEEECCSHHHHHHHHHHHHTTCCEEEECCTTCHHHHHH-HHTTCEEE-------CHHHHHHTCSEEEECSCHHH-H
T ss_pred             CCCEEEEEeeCcHhHHHHhhhhhcCCCEEEEcCCCCccHHHH-hhhccccc-------cHHHHhhhcCeeeeecchHH-H
Confidence            4678999999999999999999999999887776654 4555 67786532       12233356899988777543 4


Q ss_pred             HHHH-----HhcccCCEEEEE
Q 019199          259 DAYM-----SLLKVAGVYVLV  274 (344)
Q Consensus       259 ~~~~-----~~l~~~G~iv~~  274 (344)
                      ...+     ..|+++..+...
T Consensus        86 ~~vy~~~I~p~lk~g~~L~Fa  106 (182)
T d1np3a2          86 GRLYKEEIEPNLKKGATLAFA  106 (182)
T ss_dssp             HHHHHHHTGGGCCTTCEEEES
T ss_pred             HHHHHHhhhhhcCCCcEEEEe
Confidence            4444     345666666544

>d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Putative semialdehyde dehydrogenase
species: Rice (Oryza sativa) [TaxId: 4530]

Probab=81.06  E-value=0.66  Score=35.40  Aligned_cols=90  Identities=13%  Similarity=0.066  Sum_probs=52.6

Q ss_pred             EEEEECC-ChHHHHHHHHHHHC-CCeEEEEeCCchh---HHHHHHhC-CCcEEEeCCCHHHHHHhcCCccEEEECCCCch
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAF-GLNVTVLSTSTSK---KEEALSLL-GADKFVVSSDLEQMKALGKSLDFIIDTASGDH  256 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~-g~~V~~~~~~~~~---~~~~~~~~-g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~  256 (344)
                      +|.|+|+ |-+|+-.++++... ..++..+.+....   .......+ +.+......   .......+.|++|-+.++..
T Consensus         7 kVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~Dvvf~alp~~~   83 (183)
T d2cvoa1           7 RIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFGSVFPHLITQDLPNLVA---VKDADFSNVDAVFCCLPHGT   83 (183)
T ss_dssp             EEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHHHHCGGGTTSCCCCCBC---GGGCCGGGCSEEEECCSSSH
T ss_pred             EEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccccccccccccccccchh---hhhhhhcccceeeeccccch
Confidence            4788998 99999999998765 3366555433321   22111111 111000000   00111256999999999887


Q ss_pred             hHHHHHHhcccCCEEEEEcC
Q 019199          257 PFDAYMSLLKVAGVYVLVGF  276 (344)
Q Consensus       257 ~~~~~~~~l~~~G~iv~~g~  276 (344)
                       .......+...+.++....
T Consensus        84 -s~~~~~~l~~~~~~v~~~~  102 (183)
T d2cvoa1          84 -TQEIIKGLPQELKIVDLSA  102 (183)
T ss_dssp             -HHHHHHTSCSSCEEEECSS
T ss_pred             -HHHHHHHHHhcCcccccch
Confidence             5566677888888876653

>d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]}

class: Alpha and beta proteins (a/b)
fold: FAD/NAD(P)-binding domain
superfamily: FAD/NAD(P)-binding domain
family: FAD/NAD-linked reductases, N-terminal and central domains
domain: Trypanothione reductase
species: Crithidia fasciculata [TaxId: 5656]

Probab=81.05  E-value=1.3  Score=30.66  Aligned_cols=37  Identities=16%  Similarity=0.086  Sum_probs=28.0

Q ss_pred             CCCCEEEEECCChHHHHHHHHHHHC---CCeEEEEeCCch
Q 019199          179 QPGKSLGVIGLGGLGHMAVKFGKAF---GLNVTVLSTSTS  215 (344)
Q Consensus       179 ~~g~~vlI~Gag~~G~~ai~~a~~~---g~~V~~~~~~~~  215 (344)
                      +..++++|+|+|.+|.=++.++..+   |.+|+++.+.+.
T Consensus        16 ~~p~~v~IiGgG~ig~E~A~~l~~~~~~g~~Vtli~~~~~   55 (117)
T d1feca2          16 EAPKRALCVGGGYISIEFAGIFNAYKARGGQVDLAYRGDM   55 (117)
T ss_dssp             SCCSEEEEECSSHHHHHHHHHHHHHSCTTCEEEEEESSSS
T ss_pred             ccCCeEEEECCChHHHHHHHHhHhhcccccccceeccccc
Confidence            3457899999999998777665443   779999987643

>d1ixka_ c.66.1.38 (A:) Hypothetical methyltransferase PH1374 {Archaeon Pyrococcus horikoshii [TaxId: 53953]}

class: Alpha and beta proteins (a/b)
fold: S-adenosyl-L-methionine-dependent methyltransferases
superfamily: S-adenosyl-L-methionine-dependent methyltransferases
family: NOL1/NOP2/sun
domain: Hypothetical methyltransferase PH1374
species: Archaeon Pyrococcus horikoshii [TaxId: 53953]

Probab=80.97  E-value=5.7  Score=32.71  Aligned_cols=99  Identities=16%  Similarity=0.225  Sum_probs=60.0

Q ss_pred             CCCCCEEEEECCChHHHHHHHHHHHCC--CeEEEEeCCchhHHHHH---HhCCCc-EEEeCCCHHHHHHhcCCccEEE-E
Q 019199          178 NQPGKSLGVIGLGGLGHMAVKFGKAFG--LNVTVLSTSTSKKEEAL---SLLGAD-KFVVSSDLEQMKALGKSLDFII-D  250 (344)
Q Consensus       178 ~~~g~~vlI~Gag~~G~~ai~~a~~~g--~~V~~~~~~~~~~~~~~---~~~g~~-~~v~~~~~~~~~~~~~~~dvvi-d  250 (344)
                      .++|++||-.-|++=|. +.+++..++  ..+++.+.++.|...+.   +.+|.. .++...+..........||.|+ |
T Consensus       114 ~~~g~~vlD~CAapGgK-t~~l~~~~~~~~~i~a~d~~~~r~~~l~~~~~r~~~~~i~~~~~d~~~~~~~~~~fD~ILvD  192 (313)
T d1ixka_         114 PKPGEIVADMAAAPGGK-TSYLAQLMRNDGVIYAFDVDENRLRETRLNLSRLGVLNVILFHSSSLHIGELNVEFDKILLD  192 (313)
T ss_dssp             CCTTCEEEECCSSCSHH-HHHHHHHTTTCSEEEEECSCHHHHHHHHHHHHHHTCCSEEEESSCGGGGGGGCCCEEEEEEE
T ss_pred             CCccceeeecccchhhh-hHhhhhhcccccceeeeccCHHHHHHHHHHHHHHHhhccccccccccccccccccccEEEEc
Confidence            48999998863322132 444555443  37999999988875552   455643 3333333333333446788875 5


Q ss_pred             --CCCCc-------------------------hhHHHHHHhcccCCEEEEEcCC
Q 019199          251 --TASGD-------------------------HPFDAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       251 --~~g~~-------------------------~~~~~~~~~l~~~G~iv~~g~~  277 (344)
                        |+|..                         ..+..+++.++++|++|..-++
T Consensus       193 aPCSg~G~~~r~p~~~~~~~~~~~~~l~~~Q~~iL~~a~~~lk~gG~lVYsTCS  246 (313)
T d1ixka_         193 APCTGSGTIHKNPERKWNRTMDDIKFCQGLQMRLLEKGLEVLKPGGILVYSTCS  246 (313)
T ss_dssp             CCTTSTTTCC--------CCHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEESC
T ss_pred             cccccCCceeeccchhhhhhhhHHHHHHHHHHHHHHhhhheeCCCcEEEEeecc
Confidence              44432                         2356788889999998876544

>d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Aspartate beta-semialdehyde dehydrogenase
species: Escherichia coli [TaxId: 562]

Probab=80.91  E-value=1.9  Score=31.32  Aligned_cols=90  Identities=22%  Similarity=0.280  Sum_probs=47.8

Q ss_pred             EEEEECC-ChHHHHHHHH-HHHC---CCeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchh
Q 019199          183 SLGVIGL-GGLGHMAVKF-GKAF---GLNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHP  257 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~-a~~~---g~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~  257 (344)
                      +|.|+|| |-+|+-.+++ +...   -.+++.+.++...............+.+..+.+..    .++|++|-++++...
T Consensus         3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~~~~~~~~~~~~~~~~~~----~~~DivF~a~~~~~s   78 (146)
T d1t4ba1           3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPSFGGTTGTLQDAFDLEAL----KALDIIVTCQGGDYT   78 (146)
T ss_dssp             EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCGGGTCCCBCEETTCHHHH----HTCSEEEECSCHHHH
T ss_pred             EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeeccccccccccccCCceeeecccchhhh----hcCcEEEEecCchHH
Confidence            6889998 9999999974 4432   23566555443321111001111222222232222    469999999998773


Q ss_pred             HHHHHHhcccC--CEEEEEcC
Q 019199          258 FDAYMSLLKVA--GVYVLVGF  276 (344)
Q Consensus       258 ~~~~~~~l~~~--G~iv~~g~  276 (344)
                      ...+-+....+  ..+++.+.
T Consensus        79 ~~~~~~~~~~g~~~~VID~Ss   99 (146)
T d1t4ba1          79 NEIYPKLRESGWQGYWIDAAS   99 (146)
T ss_dssp             HHHHHHHHHTTCCCEEEECSS
T ss_pred             HHhhHHHHhcCCCeecccCCc
Confidence            33333344444  24666653

>d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]}

class: Alpha and beta proteins (a/b)
fold: NAD(P)-binding Rossmann-fold domains
superfamily: NAD(P)-binding Rossmann-fold domains
family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain
domain: Usg-1 protein homolog PA3116
species: Pseudomonas aeruginosa [TaxId: 287]

Probab=80.53  E-value=0.41  Score=35.12  Aligned_cols=90  Identities=12%  Similarity=0.091  Sum_probs=53.0

Q ss_pred             EEEEECC-ChHHHHHHHHHHHCC---CeEEEEeCCchhHHHHHHhCCCcEEEeCCCHHHHHHhcCCccEEEECCCCchhH
Q 019199          183 SLGVIGL-GGLGHMAVKFGKAFG---LNVTVLSTSTSKKEEALSLLGADKFVVSSDLEQMKALGKSLDFIIDTASGDHPF  258 (344)
Q Consensus       183 ~vlI~Ga-g~~G~~ai~~a~~~g---~~V~~~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~~~dvvid~~g~~~~~  258 (344)
                      +|.|+|+ |-+|+-.++++...+   .++..+.++...-... ...+.+..+  .+.+  .....+.|++|-+.++....
T Consensus         4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i-~~~~~~~~~--~~~~--~~~~~~~d~vf~a~p~~~s~   78 (144)
T d2hjsa1           4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRM-GFAESSLRV--GDVD--SFDFSSVGLAFFAAAAEVSR   78 (144)
T ss_dssp             CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEE-EETTEEEEC--EEGG--GCCGGGCSEEEECSCHHHHH
T ss_pred             EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCcce-eeccccchh--ccch--hhhhccceEEEecCCcchhh
Confidence            5889998 999999999997543   3676665443211111 001111111  1100  01125689999999987755


Q ss_pred             HHHHHhcccCCEEEEEcCC
Q 019199          259 DAYMSLLKVAGVYVLVGFP  277 (344)
Q Consensus       259 ~~~~~~l~~~G~iv~~g~~  277 (344)
                      ...-.....+.++++.+..
T Consensus        79 ~~~~~~~~~g~~VID~Ss~   97 (144)
T d2hjsa1          79 AHAERARAAGCSVIDLSGA   97 (144)
T ss_dssp             HHHHHHHHTTCEEEETTCT
T ss_pred             hhccccccCCceEEeechh
Confidence            5566666777788777543