Citrus Sinensis ID: 019332
Local Sequence Feature Prediction
| Prediction and (Method) | Result |
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Close Homologs for Annotation Transfer
Close Homologs in SWISS-PROT Database Detected by BLAST 
Original result of BLAST against SWISS-PROT Database
| ID | Alignment graph | Length |
Definition |
RBH(Q2H) |
RBH(H2Q) |
Q cover |
H cover |
Identity |
E-value |
| Query | 342 | 2.2.26 [Sep-21-2011] | |||||||
| Q39173 | 343 | NADP-dependent alkenal do | yes | no | 0.991 | 0.988 | 0.699 | 1e-144 | |
| Q39172 | 345 | NADP-dependent alkenal do | no | no | 0.982 | 0.973 | 0.692 | 1e-142 | |
| Q6WAU0 | 342 | (+)-pulegone reductase OS | N/A | no | 0.991 | 0.991 | 0.652 | 1e-134 | |
| Q9C0Y6 | 349 | Zinc-type alcohol dehydro | yes | no | 0.970 | 0.951 | 0.424 | 4e-66 | |
| O34812 | 339 | Putative NADP-dependent o | yes | no | 0.959 | 0.967 | 0.423 | 5e-66 | |
| Q91YR9 | 329 | Prostaglandin reductase 1 | yes | no | 0.935 | 0.972 | 0.422 | 1e-62 | |
| P76113 | 345 | NADPH-dependent curcumin | N/A | no | 0.961 | 0.953 | 0.400 | 1e-62 | |
| P97584 | 329 | Prostaglandin reductase 1 | yes | no | 0.938 | 0.975 | 0.414 | 3e-62 | |
| Q3SZJ4 | 329 | Prostaglandin reductase 1 | yes | no | 0.941 | 0.978 | 0.415 | 7e-61 | |
| Q9EQZ5 | 329 | Prostaglandin reductase 1 | yes | no | 0.938 | 0.975 | 0.426 | 8e-61 |
| >sp|Q39173|P2_ARATH NADP-dependent alkenal double bond reductase P2 OS=Arabidopsis thaliana GN=P2 PE=2 SV=2 | Back alignment and function desciption |
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Score = 509 bits (1312), Expect = e-144, Method: Compositional matrix adjust.
Identities = 240/343 (69%), Positives = 292/343 (85%), Gaps = 4/343 (1%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM--T 61
M NKQVI KD+VSGFPKE+D T +++EL+VP+GS VL+KNLYLSCDPYMR RM
Sbjct: 1 MTTNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKP 60
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT--APQLFKI 119
+ + +++ PG PI GYGV++V++S +P++KKGDL+WG+ GWEEYS++T A FKI
Sbjct: 61 DPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKI 120
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
QHTDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQFAK++GCY
Sbjct: 121 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCY 180
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+DLLK KFGFD+AFNYKEE DL+ ALKR FP+GID+YFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVL 240
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
LNM HGRIAVCGMISQYNL+ EGVHNL ++ KR+R++GF+V D+Y YPKFLE+++P
Sbjct: 241 LNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IKEGKI YVED+A+GLE AP L+GLF G+NVGKQVV +A E
Sbjct: 301 RIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343
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Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro) (By similarity). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)h homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 1EC: .EC: 3EC: .EC: 1EC: .EC: 7EC: 4 |
| >sp|Q39172|P1_ARATH NADP-dependent alkenal double bond reductase P1 OS=Arabidopsis thaliana GN=P1 PE=1 SV=1 | Back alignment and function description |
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Score = 506 bits (1302), Expect = e-142, Method: Compositional matrix adjust.
Identities = 236/341 (69%), Positives = 286/341 (83%), Gaps = 5/341 (1%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN---I 63
NKQVILKDYVSGFP E+D T +++EL+VP+G+N VL+KNLYLSCDPYMR RM
Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT--APQLFKIQH 121
+ +++ PG PI GYGV+++++S +P++KKGDL+WG+ WEEYS++T FKIQH
Sbjct: 65 TAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKIQH 124
Query: 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 181
TDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQ AK++GCYVV
Sbjct: 125 TDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYVV 184
Query: 182 GSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241
GSAGSK+K+DLLK KFGFD+AFNYKEE DL ALKR FP GIDIYFENVGGKMLDAVL+N
Sbjct: 185 GSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLVN 244
Query: 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHI 301
M +HGRIAVCGMISQYNL+ EGVHNL ++ KR+R++GF+V D+Y Y KFLE ++PHI
Sbjct: 245 MNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPHI 304
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+EGKI YVED+A+GLE AP L+GLF G+NVGKQVV VA E
Sbjct: 305 REGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
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Catalyzes the reduction of the 7-8 double bond of phenylpropanal substrates, such as p-coumaryl aldehyde and coniferyl aldehyde (in vitro). Has activity towards toxic substrates, such as 4-hydroxy-(2E)-nonenal (in vitro). May play a distinct role in plant antioxidant defense and is possibly involved in NAD(P)/NAD(P)H homeostasis. Arabidopsis thaliana (taxid: 3702) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q6WAU0|PULR_MENPI (+)-pulegone reductase OS=Mentha piperita PE=1 SV=1 | Back alignment and function description |
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Score = 479 bits (1232), Expect = e-134, Method: Compositional matrix adjust.
Identities = 223/342 (65%), Positives = 287/342 (83%), Gaps = 3/342 (0%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTN 62
MV NKQ++L +Y++G K++D+ + S+I +++P G NG +L+KNLYLS +PY+ RM
Sbjct: 1 MVMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGK 60
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWG-MTGWEEYSLVTAP-QLFKIQ 120
+ +S PG I YGV+KVLDS +P ++KG+L+WG GWEEY+L+ P LFKIQ
Sbjct: 61 LDIPQFDSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
DVPLSYY GILGMPGMTAYAGF+E+CSPK+GE VF++AA+G+VGQLVGQFAK+ GCYV
Sbjct: 121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAGSK+K+DLLKNKFGFD+AFNYKEE D + ALKR+FPEGIDIYF+NVGGKML+AV+
Sbjct: 181 VGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVIN 240
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM++HGRIAVCGM+SQY+L +PEGVHNL+ L+ K++RM+GF+V DYYHLYPKFLEM++P
Sbjct: 241 NMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPR 300
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IKEGK+ YVED++EGLESAP+ L+G++ GRNVG QVVAV+ E
Sbjct: 301 IKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342
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Monoterpene synthase that catalyzes the specific reduction of the 4,8-double bond of (+)-pulegone to produce both (-)-menthone and (+)-isomenthone in a 70:30 ratio. Unable to utilize either (-)-isopiperitenone or (+)-cis-isopulegone, or to catalyze the reverse reaction with (-)-menthone or (+)-isomenthone. Has an absolute requirement for NADPH. Mentha piperita (taxid: 34256) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 8 EC: 1 |
| >sp|Q9C0Y6|YKM8_SCHPO Zinc-type alcohol dehydrogenase-like protein PB24D3.08c OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843) GN=SPAPB24D3.08c PE=3 SV=1 | Back alignment and function description |
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Score = 252 bits (643), Expect = 4e-66, Method: Compositional matrix adjust.
Identities = 151/356 (42%), Positives = 211/356 (59%), Gaps = 24/356 (6%)
Query: 4 MVRNKQVILKDYV---SGFP--------KETDMYMTESSIELQVPKGSNGVLLKNLYLSC 52
MV N VI+K Y+ +G+P ++ + + + ++ + P VLLKN+Y S
Sbjct: 1 MVSNNAVIIKKYLDSTAGYPVIGEHLAFEKREFDLENAQVDEETP-----VLLKNIYTSV 55
Query: 53 DPYMRPRMTNIK-GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLV 111
DPY+R RM + K SY+ + G P VAKV+ S ++K G V ++GWEEY+ V
Sbjct: 56 DPYLRMRMQSPKHASYIPPLELGKPFYNSTVAKVVKSTLDQYKPGMDVVFVSGWEEYTFV 115
Query: 112 TAPQLFKIQHTD----VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQ 167
+ L +Q + +PL + G LGMP TAY G + PK GE ++ISAASGAVGQ
Sbjct: 116 SKQALGFLQPINNPYKLPLIDFVGSLGMPSQTAYCGLKHIGKPKAGETIYISAASGAVGQ 175
Query: 168 LVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227
+ GQ AK +G +VVGS GS +K + + G+D FNYK+E +AL R P+GIDIYF
Sbjct: 176 MAGQLAKAMGLHVVGSVGSDEKFKICLDS-GYDSVFNYKKESPF-KALPRLCPKGIDIYF 233
Query: 228 ENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287
ENVGG+ +DAVL NM + GRI CG ISQYN P V NL ++ K + ++GF+V +
Sbjct: 234 ENVGGETMDAVLENMNLQGRIIFCGAISQYNNPNPYRVKNLGMVLVKSLTIQGFIVANIL 293
Query: 288 HLYP-KFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
Y ++ E + I EGKI Y D+ +GLESAP IG+ G+N GK +V +A E
Sbjct: 294 PQYQEQYFEEMPKLIAEGKIKYKCDVYDGLESAPEAFIGMLQGKNSGKTIVKIADE 349
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Schizosaccharomyces pombe (strain 972 / ATCC 24843) (taxid: 284812) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|O34812|YFMJ_BACSU Putative NADP-dependent oxidoreductase YfmJ OS=Bacillus subtilis (strain 168) GN=yfmJ PE=2 SV=1 | Back alignment and function description |
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Score = 251 bits (642), Expect = 5e-66, Method: Compositional matrix adjust.
Identities = 143/338 (42%), Positives = 196/338 (57%), Gaps = 10/338 (2%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTNIKG 65
+Q+ L G P D + VP+ G VL+K LY+S DPYMR RM + K
Sbjct: 5 QQQIQLARRPQGIPVHEDFRFET----IPVPEPKQGEVLVKTLYVSVDPYMRGRMQDTK- 59
Query: 66 SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVP 125
SYVE F +SG +A+V+ S+ KKGD+V G W+E+S V+ L KI + P
Sbjct: 60 SYVEPFALDKALSGGVIAEVV-SDGNHLKKGDIVIGNLSWQEFSAVSESALRKIDTSLAP 118
Query: 126 LSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185
S Y GILGM G+TAY G ++ PK+GE V +S A+GAVG VGQ AK+ G VVG AG
Sbjct: 119 ASAYLGILGMTGLTAYFGLLDIGRPKEGETVVVSGAAGAVGSTVGQIAKIKGARVVGIAG 178
Query: 186 SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIH 245
S +KID LK + FDEA NYK D+ +AL+ P+G+D+YF+NVGG + DAV+ +
Sbjct: 179 SDEKIDYLKQELQFDEAINYKTADDIQKALQNACPDGVDVYFDNVGGPISDAVMNLLNEF 238
Query: 246 GRIAVCGMISQYNLDRPE---GVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIK 302
RI VCG IS YN + G L+ + M+GF+V DY + + + + +K
Sbjct: 239 ARIPVCGAISSYNAESEADDMGPRVQSKLIKTKSLMQGFIVSDYSDRFSEGAKQLAEWLK 298
Query: 303 EGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340
GK+ Y E + EG E+ P +GLF G N GKQ++ V+
Sbjct: 299 AGKLHYEETITEGFENIPDAFLGLFKGENKGKQLIKVS 336
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Putative quinone oxidoreductase that may contribute to the degradation of aromatic compounds. Bacillus subtilis (strain 168) (taxid: 224308) EC: 1 EC: . EC: - EC: . EC: - EC: . EC: - |
| >sp|Q91YR9|PTGR1_MOUSE Prostaglandin reductase 1 OS=Mus musculus GN=Ptgr1 PE=2 SV=2 | Back alignment and function description |
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Score = 240 bits (613), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 144/341 (42%), Positives = 204/341 (59%), Gaps = 21/341 (6%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTN 62
MV+ K LK + GFP + + + + ++P +NG VLL+ L+LS DPYMR
Sbjct: 1 MVQAKSWTLKKHFEGFPTDGNFELKTT----ELPPLNNGEVLLEALFLSVDPYMR----- 51
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFK--IQ 120
+ K G + G VA+V++S+N F KG +V + GW +S+ L K ++
Sbjct: 52 ---VAAKKLKEGDRMMGEQVARVVESKNSAFPKGTIVAALLGWTSHSISDGNGLTKLPVE 108
Query: 121 HTD-VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
D +PLS G +GMPG+TAY G ++C K GE V +SAA+GAVG +VGQ AKL GC
Sbjct: 109 WPDKLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVMVSAAAGAVGSVVGQIAKLKGCK 168
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVG+AGS +K+ LK K GFD AFNYK L EAL+ P+G D YF+NVGG+ +AV+
Sbjct: 169 VVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNAVI 227
Query: 240 LNMKIHGRIAVCGMISQYNLDR--PEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEM 296
L MK GRIA+CG ISQYN P+G + ++ +++RMEGF+V + + K L
Sbjct: 228 LQMKTFGRIAICGAISQYNRTGPCPQGPAPEV-VIYQQLRMEGFIVNRWQGEVRQKALTE 286
Query: 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
++ + EGK+ E + EG E PA +G+ G N+GK +V
Sbjct: 287 LMNWVSEGKVQCHEYVTEGFEKMPAAFMGMLKGENLGKTIV 327
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Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Mus musculus (taxid: 10090) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|P76113|CURA_ECOLI NADPH-dependent curcumin reductase OS=Escherichia coli (strain K12) GN=curA PE=1 SV=3 | Back alignment and function description |
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Score = 240 bits (612), Expect = 1e-62, Method: Compositional matrix adjust.
Identities = 137/342 (40%), Positives = 200/342 (58%), Gaps = 13/342 (3%)
Query: 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG 65
RN++ +L G P + + E + G VLL+ +YLS DPYMR RM++ +
Sbjct: 7 RNRRWVLASRPHGAPVPENFRLEEDDV---ATPGEGQVLLRTVYLSLDPYMRGRMSD-EP 62
Query: 66 SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKI-QHTDV 124
SY G + G V++V++S +P+++ GD V G +GW++Y + + L K+ H
Sbjct: 63 SYSPPVDIGGVMVGGTVSRVVESNHPDYQSGDWVLGYSGWQDYDISSGDDLVKLGDHPQN 122
Query: 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA 184
P S+ G+LGMPG TAY G ++ PK+GE + ++AA+G VG VGQ KL GC VVG A
Sbjct: 123 P-SWSLGVLGMPGFTAYMGLLDIGQPKEGETLVVAAATGPVGATVGQIGKLKGCRVVGVA 181
Query: 185 GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKI 244
G +K GFD ++ + D E L + P+GIDIY+ENVGGK+ DAVL +
Sbjct: 182 GGAEKCRHATEVLGFDVCLDHHAD-DFAEQLAKACPKGIDIYYENVGGKVFDAVLPLLNT 240
Query: 245 HGRIAVCGMISQYN-LDRPEGVHNLMYLVT----KRVRMEGFLV-RDYYHLYPKFLEMII 298
RI VCG++S YN + P G L L+ KR+R++GF++ +DY H +F +
Sbjct: 241 SARIPVCGLVSSYNATELPPGPDRLPLLMATVLKKRIRLQGFIIAQDYGHRIHEFQREMG 300
Query: 299 PHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340
+KE KI Y E++ +GLE+AP T IGL G+N GK V+ VA
Sbjct: 301 QWVKEDKIHYREEITDGLENAPQTFIGLLKGKNFGKVVIRVA 342
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Catalyzes the metal-independent reduction of curcumin to dihydrocurcumin (DHC) as an intermediate product, followed by further reduction to tetrahydrocurcumin (THC) as an end product. It also acts on 3-octene-2-one, 3-hepten-2-one, resveratrol, and trans-2-octenal. Escherichia coli (strain K12) (taxid: 83333) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: n EC: 3 |
| >sp|P97584|PTGR1_RAT Prostaglandin reductase 1 OS=Rattus norvegicus GN=Ptgr1 PE=2 SV=3 | Back alignment and function description |
|---|
Score = 239 bits (609), Expect = 3e-62, Method: Compositional matrix adjust.
Identities = 141/340 (41%), Positives = 200/340 (58%), Gaps = 19/340 (5%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTN 62
MV+ K LK + GFP +++ + + ++P +NG VLL+ L+LS DPYMR
Sbjct: 1 MVQAKTWTLKKHFEGFPTDSNFELRTT----ELPPLNNGEVLLEALFLSVDPYMR----- 51
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQH- 121
+ K G + G VA+V++S+N F G +V + GW +S+ L K+
Sbjct: 52 ---VAAKKLKEGDSMMGEQVARVVESKNSAFPTGTIVVALLGWTSHSISDGNGLRKLPAE 108
Query: 122 --TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
+PLS G +GMPG+TAY G ++C K GE V ++AA+GAVG +VGQ AKL GC
Sbjct: 109 WPDKLPLSLALGTVGMPGLTAYFGLLDICGLKGGETVLVNAAAGAVGSVVGQIAKLKGCK 168
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVG+AGS +K+ LK K GFD AFNYK L EAL+ P+G D YF+NVGG+ + V+
Sbjct: 169 VVGTAGSDEKVAYLK-KLGFDVAFNYKTVKSLEEALRTASPDGYDCYFDNVGGEFSNTVI 227
Query: 240 LNMKIHGRIAVCGMISQYNLDRP-EGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMI 297
L MK GRIA+CG ISQYN P + ++ +++RMEGF+V + + K L +
Sbjct: 228 LQMKTFGRIAICGAISQYNRTGPCPPGPSPEVIIYQQLRMEGFIVTRWQGEVRQKALTDL 287
Query: 298 IPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ + EGKI Y E + EG E PA +G+ G N+GK +V
Sbjct: 288 MNWVSEGKIRYHEYITEGFEKMPAAFMGMLKGDNLGKTIV 327
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Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Rattus norvegicus (taxid: 10116) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q3SZJ4|PTGR1_BOVIN Prostaglandin reductase 1 OS=Bos taurus GN=PTGR1 PE=2 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (597), Expect = 7e-61, Method: Compositional matrix adjust.
Identities = 141/339 (41%), Positives = 193/339 (56%), Gaps = 17/339 (5%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI 63
MV K LK + G+P +D + ++EL P VLL+ LYL+ DPYMR
Sbjct: 1 MVHAKSWTLKKHFVGYPTNSDFEL--KTVELP-PLKDGEVLLEALYLTVDPYMR------ 51
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQH-- 121
+S K G + G VA+V++S+N F G +V +GW +S+ +L K+
Sbjct: 52 --IMAKSLKEGDMMMGEQVARVVESKNSAFPTGTIVLAPSGWTTHSISNGEKLEKVLAEW 109
Query: 122 -TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
+PLS G +GMPG+TAY G ++C K GE V +SAA+GAVG +VGQ AKL GC V
Sbjct: 110 PDTLPLSLALGTVGMPGLTAYFGLLDICGVKGGETVLVSAAAGAVGSIVGQIAKLKGCKV 169
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VG+AGS +K+ LK K GFD A NYK L EALK PEG D YF+NVGG+ + +
Sbjct: 170 VGTAGSDEKVAWLK-KHGFDVALNYKTVKSLEEALKEAAPEGYDCYFDNVGGEFSNVAIT 228
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVH-NLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMII 298
MK GRIA+CG IS YN P + ++ K + ++GF+V + + K L ++
Sbjct: 229 QMKKFGRIAICGAISVYNRTSPLSPGPSPEIIIFKELHLQGFVVYRWQGEVRQKALRDLL 288
Query: 299 PHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ EGKI Y E + EG E+ PA IGL G N+GK +V
Sbjct: 289 KWVSEGKIQYHEHVTEGFENMPAAFIGLLKGENLGKAIV 327
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Has no activity towards PGE1, PGE2 and PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Bos taurus (taxid: 9913) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
| >sp|Q9EQZ5|PTGR1_CAVPO Prostaglandin reductase 1 OS=Cavia porcellus GN=Ptgr1 PE=1 SV=1 | Back alignment and function description |
|---|
Score = 234 bits (597), Expect = 8e-61, Method: Compositional matrix adjust.
Identities = 145/340 (42%), Positives = 201/340 (59%), Gaps = 19/340 (5%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTN 62
MV+ K LK + G P ++D + ++EL P NG VLL+ L+LS DPYMR
Sbjct: 1 MVKAKSWTLKKHFQGKPTQSDFEL--KTVEL--PPLKNGEVLLEALFLSVDPYMRIASKR 56
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQH- 121
+K G + G VA+V++S+N F G +V +GW + + L K+
Sbjct: 57 LK--------EGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTE 108
Query: 122 --TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
+PLS G +GMPG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL GC
Sbjct: 109 WPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCK 168
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVG+AGS +KI LK + GFD AFNYK L EALK+ P+G D YF+NVGG+ L+ VL
Sbjct: 169 VVGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVL 227
Query: 240 LNMKIHGRIAVCGMISQYN-LDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMI 297
MK G+IA+CG IS YN +D+ + ++ K++R+EGF+V + + K L +
Sbjct: 228 SQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDL 287
Query: 298 IPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ + EGKI Y E + +G E+ PA I + +G N+GK VV
Sbjct: 288 MKWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 327
|
Functions as 15-oxo-prostaglandin 13-reductase and acts on 15-oxo-PGE1, 15-oxo-PGE2 and 15-oxo-PGE2-alpha. Catalyzes the conversion of leukotriene B4 into its biologically less active metabolite, 12-oxo-leukotriene B4. This is an initial and key step of metabolic inactivation of leukotriene B4. Cavia porcellus (taxid: 10141) EC: 1 EC: . EC: 3 EC: . EC: 1 EC: . EC: 7 EC: 4 |
Close Homologs in the Non-Redundant Database Detected by BLAST
Original result of BLAST against Nonredundant Database
| GI | Alignment Graph | Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 342 | ||||||
| 225434189 | 345 | PREDICTED: NADP-dependent alkenal double | 0.994 | 0.985 | 0.809 | 1e-163 | |
| 6692816 | 343 | allyl alcohol dehydrogenase [Nicotiana t | 1.0 | 0.997 | 0.778 | 1e-158 | |
| 444302246 | 351 | Chain A, X-ray Crystal Structure Of A Do | 1.0 | 0.974 | 0.778 | 1e-158 | |
| 224117858 | 348 | predicted protein [Populus trichocarpa] | 0.994 | 0.977 | 0.766 | 1e-155 | |
| 225434197 | 345 | PREDICTED: NADP-dependent alkenal double | 0.994 | 0.985 | 0.768 | 1e-155 | |
| 308943732 | 347 | alcohol dehydrogenase [Camellia sinensis | 0.994 | 0.979 | 0.780 | 1e-154 | |
| 225434191 | 342 | PREDICTED: NADP-dependent alkenal double | 0.988 | 0.988 | 0.772 | 1e-154 | |
| 224117874 | 348 | predicted protein [Populus trichocarpa] | 0.994 | 0.977 | 0.766 | 1e-154 | |
| 224813796 | 347 | 2-alkenal reductase [Artemisia annua] | 0.994 | 0.979 | 0.754 | 1e-152 | |
| 342898879 | 348 | ketone/zingerone synthase 1 [Rubus idaeu | 0.988 | 0.971 | 0.758 | 1e-151 |
| >gi|225434189|ref|XP_002279359.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147792339|emb|CAN61471.1| hypothetical protein VITISV_043825 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 582 bits (1499), Expect = e-163, Method: Compositional matrix adjust.
Identities = 276/341 (80%), Positives = 310/341 (90%), Gaps = 1/341 (0%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN 62
E V NKQVI +DYVSGFPKE+DMY+T S+I L+VP+GS VL+KNLYLSCDPYMR RM N
Sbjct: 5 EAVSNKQVIFRDYVSGFPKESDMYVTTSTISLKVPEGSEAVLVKNLYLSCDPYMRSRMRN 64
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQH 121
I+GSYVE FKPG PI+GYGVAKVLDS +P+F+ GDLVWG+TGWEEYSL+T + LFKIQH
Sbjct: 65 IQGSYVEPFKPGSPITGYGVAKVLDSRHPDFRTGDLVWGITGWEEYSLITTDERLFKIQH 124
Query: 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 181
TDVPLSYYTGILGM GMTAY+GFYE+CSPK+GE VFISAASGAVGQLVGQFAKLLGCYVV
Sbjct: 125 TDVPLSYYTGILGMAGMTAYSGFYEICSPKKGEYVFISAASGAVGQLVGQFAKLLGCYVV 184
Query: 182 GSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241
GSAG+K+K+DLLKNKFGFDEAFNYKEE DL LKRYFPEGIDIYFENVGGKMLDAVL+N
Sbjct: 185 GSAGTKEKVDLLKNKFGFDEAFNYKEEQDLEACLKRYFPEGIDIYFENVGGKMLDAVLVN 244
Query: 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHI 301
M++HGRIAVCGMISQYNL+ PEGV NL +VTKR+RMEGFLV DYYHLYPKFL++I+P+I
Sbjct: 245 MRLHGRIAVCGMISQYNLEEPEGVRNLFTIVTKRIRMEGFLVFDYYHLYPKFLDLIMPYI 304
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+EGKIVYVED+AEGLESAP LIGL+SGRNVGKQVV VA E
Sbjct: 305 REGKIVYVEDIAEGLESAPTALIGLYSGRNVGKQVVVVARE 345
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|6692816|dbj|BAA89423.1| allyl alcohol dehydrogenase [Nicotiana tabacum] | Back alignment and taxonomy information |
|---|
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/343 (77%), Positives = 309/343 (90%), Gaps = 1/343 (0%)
Query: 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM 60
M E V NKQVILK+YV+G+PKE+DM + +I+L+VP+GSN V++KNLYLSCDPYMR RM
Sbjct: 1 MAEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRM 60
Query: 61 TNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKI 119
I+GSYVESF PG PI+GYGVAKVL+S +P+F+KGDLVWGMTGWEEYS++T Q LFKI
Sbjct: 61 RKIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
DVPLSYYTGILGMPGMTAYAGF+EVCSPK+GE VF+SAASGAVGQLVGQFAK+LGCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+DLLK+KFGFDEAFNYKEE DL+ ALKRYFP+GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
+NMK++GRIAVCGMISQYNL++ EGVHNL L+TKR+RMEGFLV DYYHLYPK+LEM+IP
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK GK+VYVED+A GLESAP L+GLFSGRN+GKQVV V+ E
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|444302246|pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302247|pdb|4HFJ|B Chain B, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum gi|444302248|pdb|4HFM|A Chain A, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302249|pdb|4HFM|B Chain B, X-ray Crystal Structure Of A Nadp(h)-bound Double Bond Reductase From Nicotiana Tabacum gi|444302250|pdb|4HFN|A Chain A, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum gi|444302251|pdb|4HFN|B Chain B, X-ray Crystal Structure Of A Ternary Complex Of Double Bond Reductase From Nicotiana Tabacum | Back alignment and taxonomy information |
|---|
Score = 563 bits (1450), Expect = e-158, Method: Compositional matrix adjust.
Identities = 267/343 (77%), Positives = 309/343 (90%), Gaps = 1/343 (0%)
Query: 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM 60
M E V NKQVILK+YV+G+PKE+DM + +I+L+VP+GSN V++KNLYLSCDPYMR RM
Sbjct: 1 MAEEVSNKQVILKNYVTGYPKESDMEIKNVTIKLKVPEGSNDVVVKNLYLSCDPYMRSRM 60
Query: 61 TNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKI 119
I+GSYVESF PG PI+GYGVAKVL+S +P+F+KGDLVWGMTGWEEYS++T Q LFKI
Sbjct: 61 RKIEGSYVESFAPGSPITGYGVAKVLESGDPKFQKGDLVWGMTGWEEYSIITPTQTLFKI 120
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
DVPLSYYTGILGMPGMTAYAGF+EVCSPK+GE VF+SAASGAVGQLVGQFAK+LGCY
Sbjct: 121 HDKDVPLSYYTGILGMPGMTAYAGFHEVCSPKKGETVFVSAASGAVGQLVGQFAKMLGCY 180
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+DLLK+KFGFDEAFNYKEE DL+ ALKRYFP+GIDIYFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKSKFGFDEAFNYKEEQDLSAALKRYFPDGIDIYFENVGGKMLDAVL 240
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
+NMK++GRIAVCGMISQYNL++ EGVHNL L+TKR+RMEGFLV DYYHLYPK+LEM+IP
Sbjct: 241 VNMKLYGRIAVCGMISQYNLEQTEGVHNLFCLITKRIRMEGFLVFDYYHLYPKYLEMVIP 300
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK GK+VYVED+A GLESAP L+GLFSGRN+GKQVV V+ E
Sbjct: 301 QIKAGKVVYVEDVAHGLESAPTALVGLFSGRNIGKQVVMVSRE 343
|
Source: Nicotiana tabacum Species: Nicotiana tabacum Genus: Nicotiana Family: Solanaceae Order: Solanales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117858|ref|XP_002331649.1| predicted protein [Populus trichocarpa] gi|222874045|gb|EEF11176.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 553 bits (1426), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/342 (76%), Positives = 309/342 (90%), Gaps = 2/342 (0%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKG-SNGVLLKNLYLSCDPYMRPRMT 61
E+V NKQVI KDYV G KE+DMY+T S+I+L+VP+ +NGVL+KNLYLSCDPYMR RM
Sbjct: 7 EVVSNKQVIFKDYVPGVLKESDMYITTSTIKLKVPEDCTNGVLVKNLYLSCDPYMRNRMR 66
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQ 120
N +GSY+ KPG PISG GVAKVLDS +P++KKGD +WGMTGWEEYSL+TA + LFKI
Sbjct: 67 NFQGSYISPLKPGSPISGRGVAKVLDSRHPDYKKGDFIWGMTGWEEYSLITATETLFKIH 126
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
DVPLSYYTGILGMPG+TAYAGFYE+CSPK+GE VFISAASGAVGQLVGQFAKLLGCYV
Sbjct: 127 DKDVPLSYYTGILGMPGLTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYV 186
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAGSKDK+DLLKNKFGFD+AFNYKEE DL+ ALKRYFP+GIDIYFENVGGKMLDAV+L
Sbjct: 187 VGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKMLDAVVL 246
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM++ GRI+VCGM+SQYNL++PEGVHNLM+LV KR+ MEGFLV D++HL+PK+L+M++P+
Sbjct: 247 NMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVPKRIHMEGFLVYDFFHLFPKYLDMVLPY 306
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK+GKIVYVED+AEGLE+APA L GLF+GRN+GKQVVAV+ E
Sbjct: 307 IKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVSHE 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434197|ref|XP_002279529.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|147783628|emb|CAN68149.1| hypothetical protein VITISV_035666 [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 552 bits (1423), Expect = e-155, Method: Compositional matrix adjust.
Identities = 262/341 (76%), Positives = 300/341 (87%), Gaps = 1/341 (0%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN 62
E V NKQVI +DYVSGFPKE+DMYMT S+I L+VP+GS V++KNLYLSCDPYMRPRM+
Sbjct: 5 EEVSNKQVIFRDYVSGFPKESDMYMTTSTISLKVPEGSKAVVVKNLYLSCDPYMRPRMSY 64
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQH 121
SY+ SFKPG ISGYGVAKVLDS +P F KGDLVWG TGWEEY+L+TAP+ LFKI +
Sbjct: 65 TTDSYIHSFKPGSVISGYGVAKVLDSGHPNFSKGDLVWGFTGWEEYTLITAPESLFKIPN 124
Query: 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 181
DVPLSYY GILGMPG+TAYAGFYE+CSPK+GE V++SAASGAVGQLVGQFAKL+GCYVV
Sbjct: 125 NDVPLSYYIGILGMPGITAYAGFYEICSPKKGEYVYVSAASGAVGQLVGQFAKLIGCYVV 184
Query: 182 GSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241
GSAGSK+K+DLLKNKFGFDEAFNYKEE DL LKRYFPEGIDIYFENVGG MLDAVL N
Sbjct: 185 GSAGSKEKVDLLKNKFGFDEAFNYKEEQDLVACLKRYFPEGIDIYFENVGGPMLDAVLAN 244
Query: 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHI 301
M++ GRIA CGMISQYNLD+P GV+NLM ++ K+++M+GF+ Y+HLYPKFLEMI+PH+
Sbjct: 245 MRVQGRIAACGMISQYNLDKPVGVYNLMNIIKKQIKMQGFVAGSYFHLYPKFLEMILPHV 304
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
KEGK+VYVED+AEGLESAP LIGLFSGRNVGKQVV VA E
Sbjct: 305 KEGKVVYVEDIAEGLESAPQALIGLFSGRNVGKQVVLVARE 345
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|308943732|gb|ADO51748.1| alcohol dehydrogenase [Camellia sinensis] | Back alignment and taxonomy information |
|---|
Score = 551 bits (1420), Expect = e-154, Method: Compositional matrix adjust.
Identities = 267/342 (78%), Positives = 301/342 (88%), Gaps = 2/342 (0%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGS-NGVLLKNLYLSCDPYMRPRMT 61
E V NKQ+ILK+YVSGFPK +DM + +I LQ+P+GS N +L+KNLYLSCDPYM RM
Sbjct: 6 EEVGNKQIILKEYVSGFPKGSDMVVKTGTIHLQLPEGSKNAILVKNLYLSCDPYMCRRMR 65
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAP-QLFKIQ 120
++ SYVESF PG PI+G+GVA+VLDS +P FKKGDL+WG TGWEEY+++T P +FKIQ
Sbjct: 66 KLEDSYVESFTPGSPITGFGVARVLDSGHPNFKKGDLIWGRTGWEEYTIITEPANVFKIQ 125
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
+TDVPLSYYTGILGM GMTAY GFYE+CSPKQG+ VFISAASGAVGQLVGQFAKLLGCYV
Sbjct: 126 NTDVPLSYYTGILGMHGMTAYVGFYEICSPKQGDYVFISAASGAVGQLVGQFAKLLGCYV 185
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAG+K+K+DLLKNKFGFDEAFNYKEE DL ALKRYFP GI+IYFENVGGKMLDAVL
Sbjct: 186 VGSAGTKEKVDLLKNKFGFDEAFNYKEEKDLEAALKRYFPNGINIYFENVGGKMLDAVLA 245
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM++H RIAVCGMISQYNL+RPEGVHNL L+TKRVRMEGF+V DYYHLYPKFLEMI+P
Sbjct: 246 NMRLHSRIAVCGMISQYNLERPEGVHNLFCLITKRVRMEGFIVFDYYHLYPKFLEMILPC 305
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK GKI YVED+AEGLESAPA LIGLFSGRNVGKQVV VA E
Sbjct: 306 IKGGKITYVEDVAEGLESAPAALIGLFSGRNVGKQVVVVARE 347
|
Source: Camellia sinensis Species: Camellia sinensis Genus: Camellia Family: Theaceae Order: Ericales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|225434191|ref|XP_002279426.1| PREDICTED: NADP-dependent alkenal double bond reductase P2 [Vitis vinifera] gi|296084343|emb|CBI24731.3| unnamed protein product [Vitis vinifera] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/339 (77%), Positives = 296/339 (87%), Gaps = 1/339 (0%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK 64
V NKQVI KDY+SGFP + DMY+T S+I L+VP+GS VL+KNLYLSCDPYMRPRMT
Sbjct: 4 VSNKQVIFKDYISGFPTDADMYITTSTISLKVPEGSKAVLVKNLYLSCDPYMRPRMTYTT 63
Query: 65 GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQHTD 123
SYV+SFKPG I GYGVAKVLDS +P F KGDLVWG T WEEYSL+T+ + L KI TD
Sbjct: 64 DSYVDSFKPGSVIEGYGVAKVLDSGHPNFSKGDLVWGFTNWEEYSLITSTEMLIKIPTTD 123
Query: 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
VPLSYYTGILGMPG+TAYAGFYE+C+PK+GE V++SAASGAVGQLVGQFAKLLGCYVVGS
Sbjct: 124 VPLSYYTGILGMPGLTAYAGFYEICTPKKGEYVYVSAASGAVGQLVGQFAKLLGCYVVGS 183
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
AGSK+K+DLLKNKFGFDEAFNYKEE DL LKRYFPEGIDIYF+NVGGKMLDAVLLNM+
Sbjct: 184 AGSKEKVDLLKNKFGFDEAFNYKEETDLVACLKRYFPEGIDIYFDNVGGKMLDAVLLNMR 243
Query: 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKE 303
+HGRIA CGMISQYNLD+ EGV NL+ ++ K+VRM+GF++ YYHLYPK+LEM++PHIKE
Sbjct: 244 VHGRIAACGMISQYNLDKLEGVCNLINIIIKQVRMQGFVITSYYHLYPKYLEMVLPHIKE 303
Query: 304 GKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
GKIVYVED EGLESAP LIGLFSGRNVGKQVV VA E
Sbjct: 304 GKIVYVEDTVEGLESAPQALIGLFSGRNVGKQVVVVARE 342
|
Source: Vitis vinifera Species: Vitis vinifera Genus: Vitis Family: Vitaceae Order: Vitales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224117874|ref|XP_002331653.1| predicted protein [Populus trichocarpa] gi|222874049|gb|EEF11180.1| predicted protein [Populus trichocarpa] | Back alignment and taxonomy information |
|---|
Score = 550 bits (1418), Expect = e-154, Method: Compositional matrix adjust.
Identities = 262/342 (76%), Positives = 308/342 (90%), Gaps = 2/342 (0%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKG-SNGVLLKNLYLSCDPYMRPRMT 61
E+V NKQVI KDYVSG KE+DMY+T S+I L+VP+ +NGVL+KNLYLSCDPYMR +M
Sbjct: 7 EVVSNKQVIFKDYVSGALKESDMYITTSTIRLKVPEDCTNGVLVKNLYLSCDPYMRIQMR 66
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQ 120
N +GSY FKPG PISG GVAKVLDS +P++KKGD +WG+TGWEEYSL+TA + LFKI
Sbjct: 67 NFQGSYFSPFKPGSPISGRGVAKVLDSRHPDYKKGDFIWGITGWEEYSLITATETLFKIH 126
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
DVPLSYYTGILGMPGMTAYAGFYE+CSPK+GE VFISAASGAVGQLVGQFAKLLGCYV
Sbjct: 127 DKDVPLSYYTGILGMPGMTAYAGFYEICSPKKGEFVFISAASGAVGQLVGQFAKLLGCYV 186
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAGSKDK+DLLKNKFGFD+AFNYKEE DL+ ALKRYFP+GIDIYFENVGGK+LDAVLL
Sbjct: 187 VGSAGSKDKVDLLKNKFGFDDAFNYKEELDLDAALKRYFPDGIDIYFENVGGKILDAVLL 246
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM++ GRI+VCGM+SQYNL++PEGVHNLM+LV KR+ MEGFLV ++HL+PK+L+M++P+
Sbjct: 247 NMRVRGRISVCGMVSQYNLEQPEGVHNLMHLVLKRIHMEGFLVYYFFHLFPKYLDMVLPY 306
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK+GKIVYVED+AEGLE+APA L GLF+GRN+GKQVVAV+ E
Sbjct: 307 IKQGKIVYVEDIAEGLENAPAALTGLFAGRNIGKQVVAVSRE 348
|
Source: Populus trichocarpa Species: Populus trichocarpa Genus: Populus Family: Salicaceae Order: Malpighiales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|224813796|gb|ACN65116.1| 2-alkenal reductase [Artemisia annua] | Back alignment and taxonomy information |
|---|
Score = 543 bits (1398), Expect = e-152, Method: Compositional matrix adjust.
Identities = 258/342 (75%), Positives = 302/342 (88%), Gaps = 2/342 (0%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYM-TESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMT 61
E++ NK+VILKDYV GFPKE+DM + T ++ L++P GSNG+L+KNLYLSCDPYMR RMT
Sbjct: 6 EVITNKKVILKDYVVGFPKESDMILKTSETMTLKLPAGSNGLLVKNLYLSCDPYMRSRMT 65
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQ 120
+GSYVESF PG P++GYGVAKVL+S + FKKGDL+WG TGWEEYS++ AP+ LFKI+
Sbjct: 66 KTEGSYVESFTPGSPLTGYGVAKVLESGHANFKKGDLIWGFTGWEEYSIINAPEGLFKIE 125
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
HTDVPLSYYTGILGMPGMTAY GFYE+C+PK+GE VF+SAASGAVGQLVGQFAKL GCYV
Sbjct: 126 HTDVPLSYYTGILGMPGMTAYVGFYEICTPKKGEYVFVSAASGAVGQLVGQFAKLSGCYV 185
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAG+K+K+DLLKNKFGFDEAFNYKEE DL+ ALKRYFPEGIDIYFENVGG+MLDAVLL
Sbjct: 186 VGSAGTKEKVDLLKNKFGFDEAFNYKEEQDLDAALKRYFPEGIDIYFENVGGRMLDAVLL 245
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM++ GRI+VCGMISQYNL++ EGV NL LVTKRV M+GF+V D+YH YPK+LEMIIP
Sbjct: 246 NMRLDGRISVCGMISQYNLEQSEGVRNLFTLVTKRVTMKGFIVFDHYHKYPKYLEMIIPL 305
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IK G I Y+ED+ EGLE+APA LIGL+SG+NVGKQVV VA E
Sbjct: 306 IKNGTINYIEDIVEGLENAPAALIGLYSGKNVGKQVVVVAHE 347
|
Source: Artemisia annua Species: Artemisia annua Genus: Artemisia Family: Asteraceae Order: Asterales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
| >gi|342898879|gb|AEL78825.1| ketone/zingerone synthase 1 [Rubus idaeus] | Back alignment and taxonomy information |
|---|
Score = 540 bits (1390), Expect = e-151, Method: Compositional matrix adjust.
Identities = 258/340 (75%), Positives = 301/340 (88%), Gaps = 2/340 (0%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI- 63
V NKQVI +DYV+GFPKE+DM +T SI L++P+GS G+LLKNLYLSCDPYMR RMTN
Sbjct: 9 VSNKQVIFRDYVTGFPKESDMELTTRSITLKLPQGSTGLLLKNLYLSCDPYMRARMTNHH 68
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQHT 122
+ SYV+SFKPG PI GYGVA+VL+S NP+F GDLVWG TGWEEYS++TA + LFKI +T
Sbjct: 69 RLSYVDSFKPGSPIIGYGVARVLESGNPKFNPGDLVWGFTGWEEYSVITATESLFKIHNT 128
Query: 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVG 182
DVPLSYYTG+LGMPGMTAYAGFYE+CSPK+GE V++SAASGAVGQLVGQFAKL GCYVVG
Sbjct: 129 DVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVYVSAASGAVGQLVGQFAKLTGCYVVG 188
Query: 183 SAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242
SAGSK+K+DLLKNKFGFDEAFNYKEE DL+ AL+RYFP+GIDIYFENVGGKMLDAVL NM
Sbjct: 189 SAGSKEKVDLLKNKFGFDEAFNYKEEADLDAALRRYFPDGIDIYFENVGGKMLDAVLPNM 248
Query: 243 KIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIK 302
+ GRIAVCGMISQYNL++PEGV NLM L+ K+VRMEGF+V YYHLY KFLE ++P+IK
Sbjct: 249 RPKGRIAVCGMISQYNLEQPEGVRNLMALIVKQVRMEGFMVFSYYHLYGKFLETVLPYIK 308
Query: 303 EGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+GKI YVED+ +GL++APA LIGL+SGRNVGKQVV V+ E
Sbjct: 309 QGKITYVEDVVDGLDNAPAALIGLYSGRNVGKQVVVVSRE 348
|
Source: Rubus idaeus Species: Rubus idaeus Genus: Rubus Family: Rosaceae Order: Rosales Class: Phylum: Streptophyta Superkingdom: Eukaryota |
Prediction of Gene Ontology (GO) Terms
Close Homologs with Gene Ontology terms Detected by BLAST
Original result of BLAST against Gene Ontology (AMIGO)
| ID |
Alignment graph |
Length |
Definition |
Q cover |
H cover |
Identity |
E-value |
| Query | 342 | ||||||
| TAIR|locus:2148166 | 343 | AT5G16990 [Arabidopsis thalian | 0.991 | 0.988 | 0.699 | 1.1e-133 | |
| TAIR|locus:2097795 | 350 | AT3G03080 [Arabidopsis thalian | 0.985 | 0.962 | 0.693 | 1.2e-131 | |
| TAIR|locus:2148131 | 345 | AER "alkenal reductase" [Arabi | 0.979 | 0.971 | 0.695 | 1.5e-131 | |
| TAIR|locus:2028736 | 351 | AT1G26320 [Arabidopsis thalian | 0.988 | 0.962 | 0.688 | 1.7e-130 | |
| TAIR|locus:2148186 | 345 | AT5G17000 [Arabidopsis thalian | 0.979 | 0.971 | 0.690 | 2.2e-130 | |
| TAIR|locus:2148116 | 346 | AT5G16960 [Arabidopsis thalian | 0.979 | 0.968 | 0.679 | 3.3e-127 | |
| UNIPROTKB|Q6WAU0 | 342 | Q6WAU0 "(+)-pulegone reductase | 0.991 | 0.991 | 0.652 | 4.3e-125 | |
| TAIR|locus:2153759 | 353 | AT5G37980 [Arabidopsis thalian | 0.982 | 0.951 | 0.663 | 1.9e-124 | |
| TAIR|locus:2153799 | 353 | AT5G37940 [Arabidopsis thalian | 0.982 | 0.951 | 0.657 | 6.3e-124 | |
| TAIR|locus:2154041 | 353 | AT5G38000 [Arabidopsis thalian | 0.976 | 0.946 | 0.641 | 4.6e-121 |
| TAIR|locus:2148166 AT5G16990 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1310 (466.2 bits), Expect = 1.1e-133, P = 1.1e-133
Identities = 240/343 (69%), Positives = 292/343 (85%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM--T 61
M NKQVI KD+VSGFPKE+D T +++EL+VP+GS VL+KNLYLSCDPYMR RM
Sbjct: 1 MTTNKQVIFKDHVSGFPKESDFNFTTTTVELRVPEGSKSVLVKNLYLSCDPYMRSRMGKP 60
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT--APQLFKI 119
+ + +++ PG PI GYGV++V++S +P++KKGDL+WG+ GWEEYS++T A FKI
Sbjct: 61 DPSSALAQAYAPGKPIYGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVITPMAHMHFKI 120
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
QHTDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQFAK++GCY
Sbjct: 121 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVYVSAASGAVGQLVGQFAKMMGCY 180
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+DLLK KFGFD+AFNYKEE DL+ ALKR FP+GID+YFENVGGKMLDAVL
Sbjct: 181 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPKGIDMYFENVGGKMLDAVL 240
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
LNM HGRIAVCGMISQYNL+ EGVHNL ++ KR+R++GF+V D+Y YPKFLE+++P
Sbjct: 241 LNMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVADFYDKYPKFLELVLP 300
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IKEGKI YVED+A+GLE AP L+GLF G+NVGKQVV +A E
Sbjct: 301 RIKEGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVIARE 343
|
|
| TAIR|locus:2097795 AT3G03080 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1291 (459.5 bits), Expect = 1.2e-131, P = 1.2e-131
Identities = 238/343 (69%), Positives = 292/343 (85%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK 64
V NKQVIL+DYV+GFPKE+D+ T+S+I+L++P+GS VL+KNLYLSCDPYMR RM
Sbjct: 9 VANKQVILRDYVTGFPKESDLIFTDSTIDLKIPEGSKTVLVKNLYLSCDPYMRIRMGKPD 68
Query: 65 ---GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQL--FKI 119
+ + PG PI G+ V+KV+DS +P++KKGDL+WG+ GW EYSL+T P +KI
Sbjct: 69 PGTAALAPHYIPGEPIYGFSVSKVIDSGHPDYKKGDLLWGLVGWGEYSLIT-PDFSHYKI 127
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
QHTDVPLSYYTG+LGMPGMTAYAGFYE+CSPK+GE VF+SAASGAVGQLVGQFAK++GCY
Sbjct: 128 QHTDVPLSYYTGLLGMPGMTAYAGFYEICSPKKGETVFVSAASGAVGQLVGQFAKIMGCY 187
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGS +K+DLLKNKFGFD+AFNYK EPDLN ALKR FPEGIDIYFENVGGKMLDAVL
Sbjct: 188 VVGSAGSNEKVDLLKNKFGFDDAFNYKAEPDLNAALKRCFPEGIDIYFENVGGKMLDAVL 247
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
LNMK+HGRIAVCGMISQYNL+ EGVHNL ++ KR+R++GF+V DY+ + KFL+ ++P
Sbjct: 248 LNMKLHGRIAVCGMISQYNLEDQEGVHNLANVIYKRIRIKGFVVSDYFDKHLKFLDFVLP 307
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+I+EGKI YVED+ EGLE+ P+ L+GLF G+NVGKQ++AVA E
Sbjct: 308 YIREGKITYVEDVVEGLENGPSALLGLFHGKNVGKQLIAVARE 350
|
|
| TAIR|locus:2148131 AER "alkenal reductase" [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1290 (459.2 bits), Expect = 1.5e-131, P = 1.5e-131
Identities = 238/342 (69%), Positives = 287/342 (83%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS 66
NKQVILKDYVSGFP E+D T +++EL+VP+G+N VL+KNLYLSCDPYMR RM S
Sbjct: 5 NKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPDPS 64
Query: 67 ---YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQL---FKIQ 120
+++ PG PI GYGV+++++S +P++KKGDL+WG+ WEEYS++T P FKIQ
Sbjct: 65 TAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVIT-PMTHAHFKIQ 123
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
HTDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQ AK++GCYV
Sbjct: 124 HTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCYV 183
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAGSK+K+DLLK KFGFD+AFNYKEE DL ALKR FP GIDIYFENVGGKMLDAVL+
Sbjct: 184 VGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVLV 243
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM +HGRIAVCGMISQYNL+ EGVHNL ++ KR+R++GF+V D+Y Y KFLE ++PH
Sbjct: 244 NMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFVVSDFYDKYSKFLEFVLPH 303
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
I+EGKI YVED+A+GLE AP L+GLF G+NVGKQVV VA E
Sbjct: 304 IREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
|
|
| TAIR|locus:2028736 AT1G26320 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1280 (455.6 bits), Expect = 1.7e-130, P = 1.7e-130
Identities = 236/343 (68%), Positives = 289/343 (84%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN-- 62
V NKQ+I DYV+GFPKE+D+ +T ++I+L++P+GS VL+KNLYLSCDPYMR M
Sbjct: 9 VTNKQIIFPDYVTGFPKESDLKITTTTIDLRLPEGSTSVLVKNLYLSCDPYMRICMGKPD 68
Query: 63 -IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQL--FKI 119
+ S V +K G+PI G GV+KV+DS +P++KKGDL+WG+ GWEEYS++T FKI
Sbjct: 69 PLSSSLVPPYKTGVPIIGLGVSKVIDSGHPDYKKGDLLWGLVGWEEYSVITLTTYSHFKI 128
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
+HTDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE VF+SAASGAVGQLVGQFAKL+GCY
Sbjct: 129 EHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKKGETVFVSAASGAVGQLVGQFAKLMGCY 188
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+ LLK KFGFD+AFNYKEE D + ALKRYFPEGIDIYFENVGGKMLDAVL
Sbjct: 189 VVGSAGSKEKVYLLKTKFGFDDAFNYKEEKDFSAALKRYFPEGIDIYFENVGGKMLDAVL 248
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
+NMK+HGR+AVCGMISQYNL PEGVHNL ++ KR++++GF V D+Y YPKFL+ ++P
Sbjct: 249 INMKLHGRVAVCGMISQYNLVDPEGVHNLPTILYKRIQLQGFGVCDFYDKYPKFLDFVLP 308
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+I+EGKI YVED+AEG ES P+ L+GLF G+NVGKQ+ VA E
Sbjct: 309 YIREGKITYVEDIAEGFESGPSALLGLFEGKNVGKQLFVVARE 351
|
|
| TAIR|locus:2148186 AT5G17000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1279 (455.3 bits), Expect = 2.2e-130, P = 2.2e-130
Identities = 236/342 (69%), Positives = 285/342 (83%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS 66
NKQV+LK+YVSGFPKE+D +++E ++P GSN VL+KNLYLSCDPYMR RM S
Sbjct: 5 NKQVVLKNYVSGFPKESDFDFKTTTVEFKLPGGSNSVLVKNLYLSCDPYMRIRMGKPDPS 64
Query: 67 ---YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQL---FKIQ 120
+++ PG PI GYGV++V++S +P++KKGDL+WG+ GWEEYS++T P FKIQ
Sbjct: 65 TAALAQAYAPGKPIFGYGVSRVIESGHPDYKKGDLLWGIVGWEEYSVIT-PMTHMHFKIQ 123
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
HTD+PLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQFAK++GCYV
Sbjct: 124 HTDIPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQFAKMMGCYV 183
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAGS +K+DLLK KFGFD+AFNYKEEPDL+ ALKR FP GIDIYFENVGGKMLDAVLL
Sbjct: 184 VGSAGSTEKVDLLKTKFGFDDAFNYKEEPDLSAALKRCFPTGIDIYFENVGGKMLDAVLL 243
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM HGRIAVCGMISQYNL+ EGVHNL ++ KR+R++GF V D+Y Y KFL+ ++PH
Sbjct: 244 NMNPHGRIAVCGMISQYNLENQEGVHNLSNIIYKRIRIQGFAVFDFYEKYSKFLDFVLPH 303
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IKEGKI YVED+A+GLE P L+GLF G+NVGKQVV +A E
Sbjct: 304 IKEGKITYVEDVADGLEKGPEALVGLFHGKNVGKQVVVIARE 345
|
|
| TAIR|locus:2148116 AT5G16960 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1249 (444.7 bits), Expect = 3.3e-127, P = 3.3e-127
Identities = 231/340 (67%), Positives = 285/340 (83%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN---I 63
NKQV+L DYV+GF KE+D+ +T ++I+L+V KGS L+KNLYLSCDPYMR RM +
Sbjct: 6 NKQVVLLDYVTGFAKESDLVITSTTIDLRVLKGSMTALVKNLYLSCDPYMRNRMRKPDPL 65
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTA-PQL-FKIQH 121
+ +SF PG PISG+GV+KV+DS + ++++GDL+WG GWEEYS++T P L FKI H
Sbjct: 66 SPATAQSFTPGKPISGFGVSKVIDSGHSDYEEGDLIWGAVGWEEYSVITPIPNLHFKIHH 125
Query: 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 181
T+ PLSYYTG+LGMPGMTAY GFYE+C+PK+G+ VF+SAASGAVGQLVGQFAKL+GCYVV
Sbjct: 126 TNFPLSYYTGLLGMPGMTAYVGFYEICTPKKGDTVFVSAASGAVGQLVGQFAKLMGCYVV 185
Query: 182 GSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241
GSAGSK+K+DLLKNKFGFD+AFNYKEE +L ALKR FPEGIDIYFENVGGKMLDAV+LN
Sbjct: 186 GSAGSKEKVDLLKNKFGFDDAFNYKEEHNLIGALKRCFPEGIDIYFENVGGKMLDAVILN 245
Query: 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHI 301
M+ HGRIA CGMISQYNL PEG++ L + KR+R+EGF DY+H Y +FLE ++P+I
Sbjct: 246 MRPHGRIAACGMISQYNLKNPEGIYGLSLITYKRIRIEGFNCFDYFHKYSEFLEFVVPYI 305
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341
KEGKI YVED+A+GLESAPA L+GLF G+NVGKQ+V V+P
Sbjct: 306 KEGKIKYVEDVADGLESAPAALVGLFHGKNVGKQLVVVSP 345
|
|
| UNIPROTKB|Q6WAU0 Q6WAU0 "(+)-pulegone reductase" [Mentha x piperita (taxid:34256)] | Back alignment and assigned GO terms |
|---|
Score = 1229 (437.7 bits), Expect = 4.3e-125, P = 4.3e-125
Identities = 223/342 (65%), Positives = 287/342 (83%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTN 62
MV NKQ++L +Y++G K++D+ + S+I +++P G NG +L+KNLYLS +PY+ RM
Sbjct: 1 MVMNKQIVLNNYINGSLKQSDLALRTSTICMEIPDGCNGAILVKNLYLSVNPYLILRMGK 60
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWG-MTGWEEYSLVTAP-QLFKIQ 120
+ +S PG I YGV+KVLDS +P ++KG+L+WG GWEEY+L+ P LFKIQ
Sbjct: 61 LDIPQFDSILPGSTIVSYGVSKVLDSTHPSYEKGELIWGSQAGWEEYTLIQNPYNLFKIQ 120
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
DVPLSYY GILGMPGMTAYAGF+E+CSPK+GE VF++AA+G+VGQLVGQFAK+ GCYV
Sbjct: 121 DKDVPLSYYVGILGMPGMTAYAGFFEICSPKKGETVFVTAAAGSVGQLVGQFAKMFGCYV 180
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSAGSK+K+DLLKNKFGFD+AFNYKEE D + ALKR+FPEGIDIYF+NVGGKML+AV+
Sbjct: 181 VGSAGSKEKVDLLKNKFGFDDAFNYKEESDYDTALKRHFPEGIDIYFDNVGGKMLEAVIN 240
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM++HGRIAVCGM+SQY+L +PEGVHNL+ L+ K++RM+GF+V DYYHLYPKFLEM++P
Sbjct: 241 NMRVHGRIAVCGMVSQYSLKQPEGVHNLLKLIPKQIRMQGFVVVDYYHLYPKFLEMVLPR 300
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
IKEGK+ YVED++EGLESAP+ L+G++ GRNVG QVVAV+ E
Sbjct: 301 IKEGKVTYVEDISEGLESAPSALLGVYVGRNVGNQVVAVSRE 342
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| TAIR|locus:2153759 AT5G37980 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1223 (435.6 bits), Expect = 1.9e-124, P = 1.9e-124
Identities = 227/342 (66%), Positives = 280/342 (81%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMT----N 62
N QVIL++YVSGFPKE+D+Y+ ++++L+VP GS VL+KNLYLSCDP+ R RM +
Sbjct: 12 NNQVILRNYVSGFPKESDLYIAATTVDLRVPPGSMAVLVKNLYLSCDPFSRIRMEKPDPS 71
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT-APQL-FKIQ 120
S ++ G PISG+GVAK +DS +P +K GDL+WG GWEEYS++T P FKI
Sbjct: 72 SPASVARAYSIGKPISGFGVAKAIDSCHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIH 131
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
HTDVPLS+YTG+LG+PG+TAY GFYE+CSPK+GE VF+SAASGAVGQLVGQFAK+ GCYV
Sbjct: 132 HTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYV 191
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSA SK+K+DLLK KFG+DEAFNYKEE DL+ ALKR FPEGIDIYFENVGGKMLDAVL
Sbjct: 192 VGSASSKEKVDLLKTKFGYDEAFNYKEEHDLSAALKRCFPEGIDIYFENVGGKMLDAVLE 251
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM+ HGRIA CGMISQYNL PEGVHNL +V KR+R++GF +++ Y KFL+ I+P+
Sbjct: 252 NMRTHGRIAACGMISQYNLKEPEGVHNLASIVYKRIRVQGFAAVEFFDKYSKFLDFILPY 311
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
++EGKI YVED+A+GLE+ P+ LIGLF G+NVGKQ+VAVA E
Sbjct: 312 VREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVAVARE 353
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| TAIR|locus:2153799 AT5G37940 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
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Score = 1218 (433.8 bits), Expect = 6.3e-124, P = 6.3e-124
Identities = 225/342 (65%), Positives = 278/342 (81%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM----TN 62
N QVIL+DYVSGFPK++D+Y+ ++I+L+VP GS VL+KNLYLSCDP+ R RM +
Sbjct: 12 NNQVILRDYVSGFPKQSDLYIATTTIDLRVPPGSMAVLVKNLYLSCDPHSRTRMGKPDPS 71
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT-APQL-FKIQ 120
+ S +F G PISG+GVAK +DS +P +K GDL+WG GWEEYS++T P FKI
Sbjct: 72 SQASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIH 131
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
HTDVPLS+YTG+LG+PG+TAY GFYE+CSPK+GE VF+SAASGAVGQLVGQFAK+ GCYV
Sbjct: 132 HTDVPLSFYTGLLGIPGLTAYVGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYV 191
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSA SK+K+DLLK KFG+D+AFNYKEE DL+ ALKR FPEGIDIYFENVGGKMLDAVL
Sbjct: 192 VGSASSKEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLDAVLQ 251
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM+ HGRIA CGMISQYNL PEG+HN +V KR+R++ F +++ Y KFL+ I+PH
Sbjct: 252 NMRTHGRIAACGMISQYNLKEPEGLHNTATIVHKRIRVQDFAAVEFFDRYSKFLDFILPH 311
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
++EGKI YVED+A+GLE+ P+ LIGLF G+NVGKQ+V VA E
Sbjct: 312 VREGKITYVEDIAQGLENGPSALIGLFHGKNVGKQLVEVARE 353
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| TAIR|locus:2154041 AT5G38000 [Arabidopsis thaliana (taxid:3702)] | Back alignment and assigned GO terms |
|---|
Score = 1191 (424.3 bits), Expect = 4.6e-121, P = 4.6e-121
Identities = 218/340 (64%), Positives = 276/340 (81%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM----TN 62
N QVI ++YV+GFPKE+D+Y+ S+++L+VP GS VL+KNLYLSCDP+ R RM +
Sbjct: 12 NNQVIFRNYVNGFPKESDLYIAASTVDLRVPPGSMAVLVKNLYLSCDPHSRTRMGKPDPS 71
Query: 63 IKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVT-APQL-FKIQ 120
S +F G PISG+GVAK +DS +P +K GDL+WG GWEEYS++T P FKI
Sbjct: 72 SPASMAHAFTIGKPISGFGVAKAIDSGHPNYKTGDLLWGRVGWEEYSVITPTPSSHFKIH 131
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
HTDVPLS+YTG+LG+PG+TAY GFYE+CSPK+GE VF+SAASGAVGQLVGQFAK+ GCYV
Sbjct: 132 HTDVPLSFYTGLLGIPGLTAYIGFYEICSPKKGETVFVSAASGAVGQLVGQFAKMAGCYV 191
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VGSA S++K+DLLK KFG+D+AFNYKEE DL+ ALKR FPEGIDIYFENVGGKML+AVL
Sbjct: 192 VGSASSEEKVDLLKTKFGYDDAFNYKEEKDLSAALKRCFPEGIDIYFENVGGKMLEAVLE 251
Query: 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300
NM+ HGRIA CGMISQYNL +PE +HN +V KR+R++GF +++ Y KFL+ I+PH
Sbjct: 252 NMRTHGRIAACGMISQYNLKKPEVLHNTATIVHKRIRVQGFAAVEFFDRYSKFLDFILPH 311
Query: 301 IKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340
++EGK+ YVED+++GLE+ P+ LIGLF G+NVGKQ+V VA
Sbjct: 312 VREGKLTYVEDISQGLENGPSALIGLFHGKNVGKQLVEVA 351
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Prediction of Enzyme Commission (EC) Number
EC Number Prediction by Annotation Transfer from SWISS-PROT Entries
Original result of BLAST against SWISS-PROT
| ID | Name | Annotated EC number | Identity | Query coverage | Hit coverage | RBH(Q2H) | RBH(H2Q) |
| Q28719 | PTGR1_RABIT | 1, ., 3, ., 1, ., 7, 4 | 0.4227 | 0.9122 | 0.8939 | yes | no |
| Q3SZJ4 | PTGR1_BOVIN | 1, ., 3, ., 1, ., 7, 4 | 0.4159 | 0.9415 | 0.9787 | yes | no |
| Q6WAU0 | PULR_MENPI | 1, ., 3, ., 1, ., 8, 1 | 0.6520 | 0.9912 | 0.9912 | N/A | no |
| Q9C0Y6 | YKM8_SCHPO | 1, ., -, ., -, ., - | 0.4241 | 0.9707 | 0.9512 | yes | no |
| Q9EQZ5 | PTGR1_CAVPO | 1, ., 3, ., 1, ., 7, 4 | 0.4264 | 0.9385 | 0.9756 | yes | no |
| O34812 | YFMJ_BACSU | 1, ., -, ., -, ., - | 0.4230 | 0.9590 | 0.9675 | yes | no |
| P97584 | PTGR1_RAT | 1, ., 3, ., 1, ., 7, 4 | 0.4147 | 0.9385 | 0.9756 | yes | no |
| Q14914 | PTGR1_HUMAN | 1, ., 3, ., 1, ., 7, 4 | 0.4058 | 0.9385 | 0.9756 | yes | no |
| Q39173 | P2_ARATH | 1, ., 3, ., 1, ., 7, 4 | 0.6997 | 0.9912 | 0.9883 | yes | no |
| Q29073 | PTGR1_PIG | 1, ., 3, ., 1, ., 7, 4 | 0.4088 | 0.9385 | 0.9756 | yes | no |
| Q91YR9 | PTGR1_MOUSE | 1, ., 3, ., 1, ., 7, 4 | 0.4222 | 0.9356 | 0.9726 | yes | no |
EC Number Prediction by Ezypred Server
Original result from Ezypred Server
Fail to connect to Ezypred Server
EC Number Prediction by EFICAz Software
| Prediction Level | EC number | Confidence of Prediction |
| 3rd Layer | 1.3.1 | 0.976 |
| 3rd Layer | 1.3.1.81 | LOW CONFIDENCE prediction! |
| 3rd Layer | 1.3.1.74 | LOW CONFIDENCE prediction! |
Prediction of Functionally Associated Proteins
Functionally Associated Proteins Detected by STRING
Original result from the STRING server
| Your Input: |  |
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 | GSVIVG00034730001 | SubName- Full=Putative uncharacterized protein (Chromosome chr5 scaffold_72, whole genome shotgun sequence); (345 aa) | |||||||||
(Vitis vinifera) | |||||||||||
Predicted Functional Partners: | |||||||||||
| Sorry, there are no predicted associations at the current settings. | |||||||||||
Conserved Domains and Related Protein Families
Conserved Domains Detected by RPS-BLAST
Original result of RPS-BLAST against CDD database part I
| ID | Alignment Graph | Length |
Definition |
E-value |
| Query | 342 | |||
| cd08295 | 338 | cd08295, double_bond_reductase_like, Arabidopsis a | 0.0 | |
| PLN03154 | 348 | PLN03154, PLN03154, putative allyl alcohol dehydro | 0.0 | |
| cd05288 | 329 | cd05288, PGDH, Prostaglandin dehydrogenases | 1e-160 | |
| COG2130 | 340 | COG2130, COG2130, Putative NADP-dependent oxidored | 1e-130 | |
| cd08294 | 329 | cd08294, leukotriene_B4_DH_like, 13-PGR is a bifun | 1e-115 | |
| TIGR02825 | 325 | TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehy | 6e-79 | |
| cd08293 | 345 | cd08293, PTGR2, Prostaglandin reductase | 1e-70 | |
| cd08250 | 329 | cd08250, Mgc45594_like, Mgc45594 gene product and | 4e-45 | |
| COG0604 | 326 | COG0604, Qor, NADPH:quinone reductase and related | 2e-29 | |
| cd05289 | 309 | cd05289, MDR_like_2, alcohol dehydrogenase and qui | 2e-26 | |
| cd05188 | 271 | cd05188, MDR, Medium chain reductase/dehydrogenase | 1e-24 | |
| cd08253 | 325 | cd08253, zeta_crystallin, Zeta-crystallin with NAD | 4e-24 | |
| cd08267 | 319 | cd08267, MDR1, Medium chain dehydrogenases/reducta | 3e-23 | |
| cd05276 | 323 | cd05276, p53_inducible_oxidoreductase, PIG3 p53-in | 7e-22 | |
| cd08241 | 323 | cd08241, QOR1, Quinone oxidoreductase (QOR) | 3e-21 | |
| cd08266 | 342 | cd08266, Zn_ADH_like1, Alcohol dehydrogenases of t | 2e-19 | |
| pfam00107 | 131 | pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | 3e-19 | |
| TIGR02824 | 325 | TIGR02824, quinone_pig3, putative NAD(P)H quinone | 2e-18 | |
| cd08275 | 337 | cd08275, MDR3, Medium chain dehydrogenases/reducta | 3e-17 | |
| cd08272 | 326 | cd08272, MDR6, Medium chain dehydrogenases/reducta | 3e-17 | |
| cd05286 | 320 | cd05286, QOR2, Quinone oxidoreductase (QOR) | 6e-17 | |
| PTZ00354 | 334 | PTZ00354, PTZ00354, alcohol dehydrogenase; Provisi | 3e-16 | |
| cd08276 | 336 | cd08276, MDR7, Medium chain dehydrogenases/reducta | 2e-14 | |
| cd08290 | 341 | cd08290, ETR, 2-enoyl thioester reductase (ETR) | 2e-14 | |
| cd08271 | 325 | cd08271, MDR5, Medium chain dehydrogenases/reducta | 2e-13 | |
| cd05282 | 323 | cd05282, ETR_like, 2-enoyl thioester reductase-lik | 3e-13 | |
| cd08259 | 332 | cd08259, Zn_ADH5, Alcohol dehydrogenases of the MD | 4e-13 | |
| TIGR02823 | 323 | TIGR02823, oxido_YhdH, putative quinone oxidoreduc | 5e-13 | |
| cd05280 | 325 | cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putativ | 2e-12 | |
| cd05195 | 293 | cd05195, enoyl_red, enoyl reductase of polyketide | 3e-12 | |
| cd08251 | 303 | cd08251, polyketide_synthase, polyketide synthase | 6e-12 | |
| cd08268 | 328 | cd08268, MDR2, Medium chain dehydrogenases/reducta | 5e-11 | |
| cd08243 | 320 | cd08243, quinone_oxidoreductase_like_1, Quinone ox | 4e-10 | |
| smart00829 | 287 | smart00829, PKS_ER, Enoylreductase | 4e-10 | |
| cd08249 | 339 | cd08249, enoyl_reductase_like, enoyl_reductase_lik | 9e-10 | |
| cd08274 | 350 | cd08274, MDR9, Medium chain dehydrogenases/reducta | 4e-09 | |
| cd08255 | 277 | cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochloro | 5e-09 | |
| cd08244 | 324 | cd08244, MDR_enoyl_red, Possible enoyl reductase | 5e-09 | |
| cd08289 | 326 | cd08289, MDR_yhfp_like, Yhfp putative quinone oxid | 7e-09 | |
| cd08248 | 350 | cd08248, RTN4I1, Human Reticulon 4 Interacting Pro | 3e-08 | |
| cd08273 | 331 | cd08273, MDR8, Medium chain dehydrogenases/reducta | 6e-08 | |
| cd08264 | 325 | cd08264, Zn_ADH_like2, Alcohol dehydrogenases of t | 6e-08 | |
| cd08288 | 324 | cd08288, MDR_yhdh, Yhdh putative quinone oxidoredu | 2e-07 | |
| PRK13771 | 334 | PRK13771, PRK13771, putative alcohol dehydrogenase | 5e-07 | |
| COG1063 | 350 | COG1063, Tdh, Threonine dehydrogenase and related | 8e-07 | |
| COG1064 | 339 | COG1064, AdhP, Zn-dependent alcohol dehydrogenases | 8e-07 | |
| cd08263 | 367 | cd08263, Zn_ADH10, Alcohol dehydrogenases of the M | 1e-06 | |
| cd08291 | 324 | cd08291, ETR_like_1, 2-enoyl thioester reductase ( | 6e-06 | |
| TIGR01751 | 398 | TIGR01751, crot-CoA-red, crotonyl-CoA reductase | 8e-06 | |
| COG1062 | 366 | COG1062, AdhC, Zn-dependent alcohol dehydrogenases | 2e-05 | |
| PRK10754 | 327 | PRK10754, PRK10754, quinone oxidoreductase, NADPH- | 2e-05 | |
| cd08254 | 338 | cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-e | 5e-05 | |
| cd08270 | 305 | cd08270, MDR4, Medium chain dehydrogenases/reducta | 6e-05 | |
| cd08246 | 393 | cd08246, crotonyl_coA_red, crotonyl-CoA reductase | 7e-05 | |
| cd08297 | 341 | cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CA | 7e-05 | |
| cd08234 | 334 | cd08234, threonine_DH_like, L-threonine dehydrogen | 1e-04 | |
| cd08245 | 330 | cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD | 0.003 | |
| cd08261 | 337 | cd08261, Zn_ADH7, Alcohol dehydrogenases of the MD | 0.003 | |
| cd08236 | 343 | cd08236, sugar_DH, NAD(P)-dependent sugar dehydrog | 0.003 |
| >gnl|CDD|176255 cd08295, double_bond_reductase_like, Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Score = 597 bits (1542), Expect = 0.0
Identities = 242/338 (71%), Positives = 281/338 (83%), Gaps = 3/338 (0%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVP-KGSNGVLLKNLYLSCDPYMRPRMTNI 63
VRNKQVILK YV+GFPKE+D+ + + + L+VP GS VL+KNLYLSCDPYMR RM
Sbjct: 1 VRNKQVILKAYVTGFPKESDLELRTTKLTLKVPPGGSGDVLVKNLYLSCDPYMRGRMKGH 60
Query: 64 KGS-YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ-LFKIQH 121
S Y+ FKPG I+GYGVAKV+DS NP+FK GDLVWG TGWEEYSL+ Q L KI H
Sbjct: 61 DDSLYLPPFKPGEVITGYGVAKVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDH 120
Query: 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVV 181
TDVPLSYY G+LGMPG+TAYAGFYEVC PK+GE VF+SAASGAVGQLVGQ AKL GCYVV
Sbjct: 121 TDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAASGAVGQLVGQLAKLKGCYVV 180
Query: 182 GSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241
GSAGS +K+DLLKNK GFD+AFNYKEEPDL+ ALKRYFP GIDIYF+NVGGKMLDAVLLN
Sbjct: 181 GSAGSDEKVDLLKNKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLN 240
Query: 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHI 301
M +HGRIA CGMISQYNL+ PEGV NL+ ++ KRV+++GFLV DY H YP+FLE + +I
Sbjct: 241 MNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYI 300
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
KEGK+ YVED+A+GLESAP +GLF+G N+GKQVV V
Sbjct: 301 KEGKLKYVEDIADGLESAPEAFVGLFTGSNIGKQVVKV 338
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This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in inflamatory cells, and in other cells by bifunctional LTB4 12-HD/PGR. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 338 |
| >gnl|CDD|215606 PLN03154, PLN03154, putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 532 bits (1371), Expect = 0.0
Identities = 235/344 (68%), Positives = 281/344 (81%), Gaps = 4/344 (1%)
Query: 3 EMVRNKQVILKDYVSGFPKETDMYMTE-SSIELQVPKGSNGVLLKNLYLSCDPYMRPRMT 61
++V NKQVILK+Y+ G PKETDM + + IEL+ PKGS L+KNLYLSCDPYMR RM
Sbjct: 5 QVVENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMR 64
Query: 62 NIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLV--TAPQLFKI 119
+ SY+ F PG I G+GV+KV+DS++P FK GDL+ G+TGWEEYSL+ + QL KI
Sbjct: 65 DFHDSYLPPFVPGQRIEGFGVSKVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKI 124
Query: 120 Q-HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 178
Q D+PLSY+ G+LGM G TAYAGFYEVCSPK+G+ VF+SAASGAVGQLVGQ AKL GC
Sbjct: 125 QLQDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVSAASGAVGQLVGQLAKLHGC 184
Query: 179 YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAV 238
YVVGSAGS K+DLLKNK GFDEAFNYKEEPDL+ ALKRYFPEGIDIYF+NVGG MLDA
Sbjct: 185 YVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAA 244
Query: 239 LLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMII 298
LLNMKIHGRIAVCGM+S +L +G+HNL L++KR+RM+GFL DY HL+P+FLE +
Sbjct: 245 LLNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVS 304
Query: 299 PHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+ K+GKIVY+EDM+EGLESAPA L+GLFSG+NVGKQV+ VA E
Sbjct: 305 RYYKQGKIVYIEDMSEGLESAPAALVGLFSGKNVGKQVIRVAKE 348
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Length = 348 |
| >gnl|CDD|176190 cd05288, PGDH, Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Score = 450 bits (1160), Expect = e-160
Identities = 163/334 (48%), Positives = 215/334 (64%), Gaps = 9/334 (2%)
Query: 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPK-GSNGVLLKNLYLSCDPYMRPRMTNIKG 65
N+QV+L G P D + E +P+ VL++ LYLS DPYMR M++ K
Sbjct: 2 NRQVVLAKRPEGPPPPDDFELVEV----PLPELKDGEVLVRTLYLSVDPYMRGWMSDAK- 56
Query: 66 SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTA-PQLFKIQHTD- 123
SY + G P+ G GV +V++S +P+FK GDLV G GW+EY++V L K+ +
Sbjct: 57 SYSPPVQLGEPMRGGGVGEVVESRSPDFKVGDLVSGFLGWQEYAVVDGASGLRKLDPSLG 116
Query: 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
+PLS Y G+LGM G+TAY G E+ PK GE V +SAA+GAVG +VGQ AKLLG VVG
Sbjct: 117 LPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVSAAAGAVGSVVGQIAKLLGARVVGI 176
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
AGS +K L + GFD A NYK PDL EALK P+GID+YF+NVGG++LDA L +
Sbjct: 177 AGSDEKCRWLVEELGFDAAINYKT-PDLAEALKEAAPDGIDVYFDNVGGEILDAALTLLN 235
Query: 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKE 303
GRIA+CG ISQYN P G NL ++TKR+ M+GF+V DY +P+ L + + E
Sbjct: 236 KGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAE 295
Query: 304 GKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
GK+ Y ED+ EGLE+AP +GLF+G+N GK VV
Sbjct: 296 GKLKYREDVVEGLENAPEAFLGLFTGKNTGKLVV 329
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|225041 COG2130, COG2130, Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Score = 376 bits (967), Expect = e-130
Identities = 159/338 (47%), Positives = 212/338 (62%), Gaps = 9/338 (2%)
Query: 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPK-GSNGVLLKNLYLSCDPYMRPRMTNIK 64
N++++L G P D E+ VP+ G VLL+ LYLS DPYMR RM++
Sbjct: 8 VNRRIVLASRPEGAPVPDDF----RLEEVDVPEPGEGQVLLRTLYLSLDPYMRGRMSDAP 63
Query: 65 GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDV 124
SY + G + G VAKV+ S +P F+ GD+V G++GW+EY++ L K+ +
Sbjct: 64 -SYAPPVELGEVMVGGTVAKVVASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPA 122
Query: 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA 184
PLS Y G+LGMPG+TAY G ++ PK GE V +SAA+GAVG +VGQ AKL GC VVG A
Sbjct: 123 PLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVGSVVGQIAKLKGCRVVGIA 182
Query: 185 GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKI 244
G +K D L + GFD +YK E D +ALK P+GID+YFENVGG++LDAVL + +
Sbjct: 183 GGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNL 241
Query: 245 HGRIAVCGMISQYN-LDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMIIPHIK 302
RI VCG ISQYN + P G L L+ KR+R++GF+V Y +P+ L + +K
Sbjct: 242 FARIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVK 301
Query: 303 EGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340
EGKI Y E + +GLE+AP IGL SG+N GK VV VA
Sbjct: 302 EGKIQYRETIVDGLENAPEAFIGLLSGKNFGKLVVKVA 339
|
Length = 340 |
| >gnl|CDD|176254 cd08294, leukotriene_B4_DH_like, 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Score = 336 bits (864), Expect = e-115
Identities = 145/343 (42%), Positives = 201/343 (58%), Gaps = 22/343 (6%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTNI 63
V+ K +LK + G PKE+D + E + P +G VL + L+LS DPYMRP
Sbjct: 1 VKAKTWVLKKHFDGKPKESDFELVEEEL----PPLKDGEVLCEALFLSVDPYMRP----- 51
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLV---TAPQLFKI- 119
Y + G + G VAKV++S+N +F G +V GW +++ P L+K+
Sbjct: 52 ---YSKRLNEGDTMIGTQVAKVIESKNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKLP 108
Query: 120 --QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLG 177
D+P S G+LGMPG+TAY G E+C PK GE V ++ A+GAVG LVGQ AK+ G
Sbjct: 109 ADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVVNGAAGAVGSLVGQIAKIKG 168
Query: 178 CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDA 237
C V+G AGS DK+ LK + GFD FNYK L EALK P+GID YF+NVGG+
Sbjct: 169 CKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSST 226
Query: 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNL-MYLVTKRVRMEGFLVRDYYHLYPKFLEM 296
VL +M GR+AVCG IS YN P+ + ++ K+++MEGF+V + +P+ L+
Sbjct: 227 VLSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQ 286
Query: 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
++ IKEGK+ Y E + EG E+ P IG+ G N GK +V V
Sbjct: 287 LLKWIKEGKLKYREHVTEGFENMPQAFIGMLKGENTGKAIVKV 329
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|131872 TIGR02825, B4_12hDH, leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Score = 244 bits (623), Expect = 6e-79
Identities = 140/342 (40%), Positives = 194/342 (56%), Gaps = 31/342 (9%)
Query: 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNG-VLLKNLYLSCDPYMRPRMTNIKGS 66
K LK + G+P ++D + ++P +NG VLL+ L+LS DPYMR
Sbjct: 2 KTWTLKKHFVGYPTDSDFELKTV----ELPPLNNGEVLLEALFLSVDPYMR--------V 49
Query: 67 YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHT---D 123
+ K G + G VA+V++S+N KG +V GW +S+ L K+
Sbjct: 50 AAKRLKEGDTMMGQQVARVVESKNVALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDT 109
Query: 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
+PLS G +GMPG+TAY G E+C K GE V ++AA+GAVG +VGQ AKL GC VVG+
Sbjct: 110 LPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAAGAVGSVVGQIAKLKGCKVVGA 169
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
AGS +K+ LK K GFD AFNYK L E LK+ P+G D YF+NVGG+ + V+ MK
Sbjct: 170 AGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQMK 228
Query: 244 IHGRIAVCGMISQYNLD-------RPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLE 295
GRIA+CG IS YN PE V + + +RMEGF+V + + K L+
Sbjct: 229 KFGRIAICGAISTYNRTGPLPPGPPPEIV------IYQELRMEGFIVNRWQGEVRQKALK 282
Query: 296 MIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
++ + EGKI Y E + EG E+ PA +G+ G N+GK +V
Sbjct: 283 ELLKWVLEGKIQYKEYVIEGFENMPAAFMGMLKGENLGKTIV 324
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. Length = 325 |
| >gnl|CDD|176253 cd08293, PTGR2, Prostaglandin reductase | Back alignment and domain information |
|---|
Score = 223 bits (569), Expect = 1e-70
Identities = 127/349 (36%), Positives = 196/349 (56%), Gaps = 22/349 (6%)
Query: 7 NKQVILKDY--VSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK 64
NK+V+L +G P + + E ++ ++ +G VL++ LYLS DPYMR RM
Sbjct: 3 NKRVVLNSRPGKNGNPVAENFRVEECTLPDELNEGQ--VLVRTLYLSVDPYMRCRMNEDT 60
Query: 65 GS-YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT-GWEEYSLVTAPQLFKI--Q 120
G+ Y+ ++ + G GV V +S++ +F GD+V W+ Y+++ L K+ Q
Sbjct: 61 GTDYLAPWQLSQVLDGGGVGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKVDPQ 120
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYE--VCSPKQGECVFISAASGAVGQLVGQFAKLLGC 178
D LSY+ G +G+PG+TA G E +P + + +S A+GA G L GQ +LLGC
Sbjct: 121 LVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQTMVVSGAAGACGSLAGQIGRLLGC 180
Query: 179 -YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDA 237
VVG GS +K LLK++ GFD A NYK + ++ E L+ PEG+D+YF+NVGG++ D
Sbjct: 181 SRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEISDT 239
Query: 238 VLLNMKIHGRIAVCGMISQYNLDRP------EGVHNLMYLVTKR-VRMEGFLVRDYYHLY 290
V+ M + I +CG ISQYN D P E ++ +R + E FLV +Y +
Sbjct: 240 VISQMNENSHIILCGQISQYNKDVPYPPPLPEATEA---ILKERNITRERFLVLNYKDKF 296
Query: 291 PKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
+ + + +KEGK+ E + EGLE+A + +G N+GKQ+V V
Sbjct: 297 EEAIAQLSQWVKEGKLKVKETVYEGLENAGEAFQSMMNGGNIGKQIVKV 345
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 345 |
| >gnl|CDD|176212 cd08250, Mgc45594_like, Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Score = 156 bits (397), Expect = 4e-45
Identities = 107/322 (33%), Positives = 156/322 (48%), Gaps = 34/322 (10%)
Query: 33 ELQVPKGSNGVLLKNLYL---SCDPYMRPRMTNI-KGSYVESFKPGMPISGYGVAKVLD- 87
+ +P G VL+KN ++ + D N G Y KP GV +V+
Sbjct: 24 PVPLP-GPGEVLVKNRFVGINASD-------INFTAGRYDPGVKPPFDCGFEGVGEVVAV 75
Query: 88 -SENPEFKKGDLVWGMT--GWEEYSLVTAPQLFKIQHTDVPL---SYYTGILGMPGMTAY 141
+FK GD V M+ + EY +V A VP ++ G+TA
Sbjct: 76 GEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVP-----VPELKPEVLPLLVS--GLTAS 128
Query: 142 AGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE 201
EV K GE V ++AA+G GQ Q AKL GC+V+G+ S +K + LK+ G D
Sbjct: 129 IALEEVGEMKSGETVLVTAAAGGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLKS-LGCDR 187
Query: 202 AFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDR 261
NYK E DL E LK+ +P+G+D+ +E+VGG+M D + N+ + GR+ V G IS Y
Sbjct: 188 PINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNLALKGRLIVIGFISGYQSGT 246
Query: 262 ---PEGVHNL-MYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAE--G 315
P L L+ K + GF + Y L P+ L+ ++ + GK+V D G
Sbjct: 247 GPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRG 306
Query: 316 LESAPATLIGLFSGRNVGKQVV 337
LES + L+SG+N+GK VV
Sbjct: 307 LESVADAVDYLYSGKNIGKVVV 328
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 329 |
| >gnl|CDD|223677 COG0604, Qor, NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Score = 114 bits (288), Expect = 2e-29
Identities = 83/278 (29%), Positives = 121/278 (43%), Gaps = 23/278 (8%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLVWGMT------GWEEYSLVTAPQLFKIQHTDVP- 125
PG +G V V S FK GD V + G+ EY +V A L +P
Sbjct: 61 PGSEAAGV-VVAV-GSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVP-----LPD 113
Query: 126 -LSY-YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
LS+ L + G+TA+ ++ K GE V + A+G VG Q AK LG VV
Sbjct: 114 GLSFEEAAALPLAGLTAWLALFDRAGLKPGETVLVHGAAGGVGSAAIQLAKALGATVVAV 173
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
S +K++LLK + G D NY+EE + + + +G+D+ + VGG A L +
Sbjct: 174 VSSSEKLELLK-ELGADHVINYREEDFVEQVRELTGGKGVDVVLDTVGGDTFAASLAALA 232
Query: 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH-LYPKFLEMIIPHIK 302
GR+ G +S P NL+ L+ KR+ + G + + L + +
Sbjct: 233 PGGRLVSIGALS----GGPPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLA 288
Query: 303 EGKIVYVEDMAEGLESAPATLIGLFS-GRNVGKQVVAV 339
GK+ V D L APA L R GK V+ V
Sbjct: 289 SGKLKPVIDRVYPLAEAPAAAAHLLLERRTTGKVVLKV 326
|
Length = 326 |
| >gnl|CDD|176191 cd05289, MDR_like_2, alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Score = 106 bits (267), Expect = 2e-26
Identities = 81/287 (28%), Positives = 115/287 (40%), Gaps = 40/287 (13%)
Query: 65 GSYVESFKPGMP-ISGYGVAKVLD---SENPEFKKGDLVWGMTGWE------EYSLVTAP 114
G +F +P I G+ VA V+ FK GD V+GMT + EY +V A
Sbjct: 49 GLLKAAFPLTLPLIPGHDVAGVVVAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPAD 108
Query: 115 QLFKIQHTDVP--LSYYT-GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQ 171
+L P LS+ L + G+TA+ +E+ K G+ V I A+G VG Q
Sbjct: 109 ELALK-----PANLSFEEAAALPLAGLTAWQALFELGGLKAGQTVLIHGAAGGVGSFAVQ 163
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231
AK G V+ +A S D L+ G DE +Y + A P G+D + VG
Sbjct: 164 LAKARGARVIATA-SAANADFLR-SLGADEVIDYTKGDFERAAA----PGGVDAVLDTVG 217
Query: 232 GKMLDAVLLNMKIHGRIA-VCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLY 290
G+ L L +K GR+ + G + G VR V
Sbjct: 218 GETLARSLALVKPGGRLVSIAGPPPAEQAAKRRG-----------VRAGFVFVEP----D 262
Query: 291 PKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ L + ++ GK+ V D LE A L SG GK V+
Sbjct: 263 GEQLAELAELVEAGKLRPVVDRVFPLEDAAEAHERLESGHARGKVVL 309
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 309 |
| >gnl|CDD|176178 cd05188, MDR, Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 1e-24
Identities = 67/240 (27%), Positives = 94/240 (39%), Gaps = 20/240 (8%)
Query: 65 GSYVESFKPG-----MPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKI 119
G V K G +P G G + L E G+ EY +V A L +
Sbjct: 45 GPGVTGVKVGDRVVVLPNLGCGTCE-LCRELCPGGGILGEGLDGGFAEYVVVPADNLVPL 103
Query: 120 QHTDVPLSYYTGIL-GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 178
LS L P TAY K G+ V + A G VG L Q AK G
Sbjct: 104 ---PDGLSLEEAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAKAAGA 159
Query: 179 YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM-LDA 237
V+ + S +K++L K + G D +YKEE DL E L+ G D+ + VGG L
Sbjct: 160 RVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELRLTGGGGADVVIDAVGGPETLAQ 217
Query: 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMI 297
L ++ GRI V G S L L+ K + + G + + L+++
Sbjct: 218 ALRLLRPGGRIVVVGGTSGGPPLDD-----LRRLLFKELTIIGSTGGT-REDFEEALDLL 271
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Other MDR members have only a catalytic zinc, and some contain no coordinated zinc. Length = 271 |
| >gnl|CDD|176215 cd08253, zeta_crystallin, Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Score = 100 bits (251), Expect = 4e-24
Identities = 54/169 (31%), Positives = 76/169 (44%), Gaps = 13/169 (7%)
Query: 93 FKKGDLVW-GMTGWE-------EYSLVTAPQLFKIQHTDVPLSYYTGI-LGMPGMTAYAG 143
K GD VW GW EY +V A QL + +S+ G LG+P +TAY
Sbjct: 79 LKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL---PDGVSFEQGAALGIPALTAYRA 135
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF 203
+ K GE V + SGAVG Q A+ G V+ +A S + +L++ G D F
Sbjct: 136 LFHRAGAKAGETVLVHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVRQA-GADAVF 194
Query: 204 NYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
NY+ E + L +G+D+ E + L L + GRI V G
Sbjct: 195 NYRAEDLADRILAATAGQGVDVIIEVLANVNLAKDLDVLAPGGRIVVYG 243
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176228 cd08267, MDR1, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 97.7 bits (244), Expect = 3e-23
Identities = 81/279 (29%), Positives = 118/279 (42%), Gaps = 35/279 (12%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWE------EYSLVTAPQLFKIQHTDVP- 125
PGM +G VA + S FK GD V+G + EY + L K P
Sbjct: 62 PGMDFAGEVVA--VGSGVTRFKVGDEVFGRLPPKGGGALAEYVVAPESGLAKK-----PE 114
Query: 126 -LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
+S+ L + G+TA + K G+ V I+ ASG VG Q AK LG +V G
Sbjct: 115 GVSFEEAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGAHVTGV 174
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEP--DLNEALKRYFPEGIDIYFENVGGKMLDAV--L 239
++ +L+++ G DE +Y E L ++Y D+ F+ VG
Sbjct: 175 CSTR-NAELVRS-LGADEVIDYTTEDFVALTAGGEKY-----DVIFDAVGNSPFSLYRAS 227
Query: 240 LNMKIHGR-IAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMII 298
L +K GR ++V G S L L +R++ FL + + LE +
Sbjct: 228 LALKPGGRYVSVGGGPSGLLLVLLLLPLTL-GGGGRRLKF--FLAKP----NAEDLEQLA 280
Query: 299 PHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
++EGK+ V D LE AP L SGR GK V+
Sbjct: 281 ELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKVVI 319
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 319 |
| >gnl|CDD|176180 cd05276, p53_inducible_oxidoreductase, PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Score = 94.0 bits (235), Expect = 7e-22
Identities = 77/280 (27%), Positives = 120/280 (42%), Gaps = 32/280 (11%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQLFKIQHTDVPLSY- 128
G+ ++G VA + +K GD V + G+ EY +V A QL + P
Sbjct: 61 LGLEVAGVVVA--VGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV-----PEGLS 113
Query: 129 YTGILGMP--GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186
+P TA+ +++ K GE V I + VG Q AK LG V+ +AGS
Sbjct: 114 LVEAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGASGVGTAAIQLAKALGARVIATAGS 173
Query: 187 KDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFENVGGKMLDAVLLNMKIH 245
++K++ + G D A NY+ E D E +K G+D+ + VGG L L +
Sbjct: 174 EEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRALAPD 231
Query: 246 GRIAVCGMISQYNLDRPEGVH---NLMYLVTKRVRMEGFLVR---DYY--HLYPKFLEMI 297
GR+ + G++ G +L L+ KR+ + G +R L F E +
Sbjct: 232 GRLVLIGLLG--------GAKAELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHV 283
Query: 298 IPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
P G+I V D LE A + S ++GK V+
Sbjct: 284 WPLFASGRIRPVIDKVFPLEEAAEAHRRMESNEHIGKIVL 323
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176203 cd08241, QOR1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 92.2 bits (230), Expect = 3e-21
Identities = 81/278 (29%), Positives = 121/278 (43%), Gaps = 25/278 (8%)
Query: 71 FKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGW---EEYSLVTAPQLFKIQHTDVP-- 125
F PG ++G A + FK GD V +TG E +V A +F + P
Sbjct: 59 FVPGSEVAGVVEA--VGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPL-----PDG 111
Query: 126 LSYYTGI-LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA 184
LS+ L + TAY + GE V + A+G VG Q AK LG V+ +A
Sbjct: 112 LSFEEAAALPVTYGTAYHALVRRARLQPGETVLVLGAAGGVGLAAVQLAKALGARVIAAA 171
Query: 185 GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK-RYFPEGIDIYFENVGGKMLDAVLLNMK 243
S++K+ L + G D +Y +PDL E +K G+D+ ++ VGG + +A L ++
Sbjct: 172 SSEEKLALAR-ALGADHVIDY-RDPDLRERVKALTGGRGVDVVYDPVGGDVFEASLRSLA 229
Query: 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEM----IIP 299
GR+ V G S + P+ NL+ L K + + G Y P+ L +
Sbjct: 230 WGGRLLVIGFASG---EIPQIPANLLLL--KNISVVGVYWGAYARREPELLRANLAELFD 284
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ EGKI LE A L L + GK V+
Sbjct: 285 LLAEGKIRPHVSAVFPLEQAAEALRALADRKATGKVVL 322
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 323 |
| >gnl|CDD|176227 cd08266, Zn_ADH_like1, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 87.3 bits (217), Expect = 2e-19
Identities = 50/190 (26%), Positives = 83/190 (43%), Gaps = 13/190 (6%)
Query: 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD 210
+ GE V + A VG Q AKL G V+ +AGS+DK++ K G D +Y++E
Sbjct: 165 RPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAKE-LGADYVIDYRKEDF 223
Query: 211 LNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMY 270
+ E + G+D+ E+VG + L ++ GR+ CG + Y E +L +
Sbjct: 224 VREVRELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRH 278
Query: 271 LVTKRVRMEG-FLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSG 329
+ +++ + G + L+ + + GK+ V D LE A L S
Sbjct: 279 VFWRQLSILGSTMGT------KAELDEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESR 332
Query: 330 RNVGKQVVAV 339
GK V+
Sbjct: 333 EQFGKIVLTP 342
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 342 |
| >gnl|CDD|215721 pfam00107, ADH_zinc_N, Zinc-binding dehydrogenase | Back alignment and domain information |
|---|
Score = 82.4 bits (204), Expect = 3e-19
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 11/138 (7%)
Query: 164 AVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP-E 221
VG Q AK LG V+ S++K++L K + G D NY++E D E ++
Sbjct: 1 GVGLAAVQLAKALGAARVIAVDRSEEKLELAK-ELGADHVINYRDE-DFVERVRELTGGR 58
Query: 222 GIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEG 280
G+D+ + VG L+ L ++ GR+ V G+ + P L L+ K + + G
Sbjct: 59 GVDVVIDCVGAPATLEQALELLRPGGRVVVVGLPGGAPVPFP-----LRDLLLKELTILG 113
Query: 281 FLVRDYYHLYPKFLEMII 298
L + + LE++
Sbjct: 114 SLGGGREE-FEEALELLA 130
|
Length = 131 |
| >gnl|CDD|234027 TIGR02824, quinone_pig3, putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Score = 84.6 bits (210), Expect = 2e-18
Identities = 73/278 (26%), Positives = 117/278 (42%), Gaps = 24/278 (8%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQLFKIQHTDVPLSYY 129
G+ ++G VA + +K GD V + G+ EY V A Q+ + LS
Sbjct: 61 LGLEVAGEVVA--VGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPVPE---GLSLV 115
Query: 130 TGILGMPG--MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187
+P T ++ ++ K GE V I + +G Q AK G V +AGS
Sbjct: 116 EAA-ALPETFFTVWSNLFQRGGLKAGETVLIHGGASGIGTTAIQLAKAFGARVFTTAGSD 174
Query: 188 DKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP-EGIDIYFENVGGKMLDAVLLNMKIHG 246
+K G D A NY+EE D E +K +G+D+ + VGG L+ + + + G
Sbjct: 175 EKCA-ACEALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKALALDG 232
Query: 247 RIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH-----LYPKFLEMIIPHI 301
RI G + +L L+ KR+ + G +R + + E + P +
Sbjct: 233 RIVQIGF-----QGGRKAELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLL 287
Query: 302 KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
G++ V D LE A + SG ++GK V+ V
Sbjct: 288 ASGRVRPVIDKVFPLEDAAQAHALMESGDHIGKIVLTV 325
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized [Unknown function, Enzymes of unknown specificity]. Length = 325 |
| >gnl|CDD|176236 cd08275, MDR3, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 81.1 bits (201), Expect = 3e-17
Identities = 73/291 (25%), Positives = 124/291 (42%), Gaps = 31/291 (10%)
Query: 73 PGMPIS-GYGVAKVLDS---ENPEFKKGDLVWGMT---GWEEYSLVTAPQLFKIQHTDVP 125
P P G+ A +++ +FK GD V G+T G+ E V A Q+F +
Sbjct: 54 PKPPFVPGFECAGTVEAVGEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPLPD---G 110
Query: 126 LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGS 183
+S+ + +TAY +E+ + + G+ V + +A+G VG GQ K + VVG+
Sbjct: 111 MSFEEAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAGGVGLAAGQLCKTVPNVTVVGT 170
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
A S K + LK G +Y+ + D E +K+ PEG+DI + +GG+ +K
Sbjct: 171 A-SASKHEALKEN-GVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLLK 227
Query: 244 IHGRIAVCGMISQYNLDRPEGVHNL-MYLVTKRVR-ME-------------GFLVRDYYH 288
GR+ V G + ++ + +V M+ G+L +
Sbjct: 228 PMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEEREL 287
Query: 289 LYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
L + ++ +EGKI D E + L S +N+GK V+
Sbjct: 288 LTEVMDK-LLKLYEEGKIKPKIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176233 cd08272, MDR6, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 80.7 bits (200), Expect = 3e-17
Identities = 47/182 (25%), Positives = 76/182 (41%), Gaps = 27/182 (14%)
Query: 93 FKKGDLVWGMTG--------WEEYSLVTA-------PQLFKIQHTDVPLSYYTGILGMPG 137
F+ GD V+G G EY++V A L + +PL G
Sbjct: 79 FRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALKPANLSMREAAALPL---------VG 129
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TA+ G + + + G+ V I +G VG + Q AK G V +A S +K +
Sbjct: 130 ITAWEGLVDRAAVQAGQTVLIHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SL 187
Query: 198 GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQY 257
G D Y+E + G D+ F+ VGG+ LDA + ++GR+ + +
Sbjct: 188 GADPIIYYRETVV-EYVAEHTGGRGFDVVFDTVGGETLDASFEAVALYGRVVSILGGATH 246
Query: 258 NL 259
+L
Sbjct: 247 DL 248
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 326 |
| >gnl|CDD|176189 cd05286, QOR2, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 79.8 bits (198), Expect = 6e-17
Identities = 63/217 (29%), Positives = 102/217 (47%), Gaps = 22/217 (10%)
Query: 33 ELQVPK-GSNGVLLKNLYLSC---DPYMRPRMTNIKGSYVES--FKPGMPISGYGVAKVL 86
++ VP+ G VL++N + D Y R G Y F G+ G GV + +
Sbjct: 18 DVPVPEPGPGEVLVRNTAIGVNFIDTYFR------SGLYPLPLPFVLGV--EGAGVVEAV 69
Query: 87 DSENPEFKKGDLV-WGMTG--WEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAG 143
FK GD V + + EY +V A +L K+ + +L + G+TA+
Sbjct: 70 GPGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKLP-DGISDETAAALL-LQGLTAHYL 127
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF 203
E K G+ V + AA+G VG L+ Q+AK LG V+G+ S++K +L + G D
Sbjct: 128 LRETYPVKPGDTVLVHAAAGGVGLLLTQWAKALGATVIGTVSSEEKAELARAA-GADHVI 186
Query: 204 NYKEEPDLNEALKRY-FPEGIDIYFENVGGKMLDAVL 239
NY++E D E ++ G+D+ ++ VG + L
Sbjct: 187 NYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSL 222
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone and 1,4-naphthoquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 320 |
| >gnl|CDD|173547 PTZ00354, PTZ00354, alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 78.1 bits (193), Expect = 3e-16
Identities = 64/275 (23%), Positives = 116/275 (42%), Gaps = 18/275 (6%)
Query: 74 GMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQLFKIQHTDVPLSYYT 130
G+ ++GY + S+ FK+GD V + G+ EY++ + I
Sbjct: 63 GLEVAGYVED--VGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHIP-QGYTFEEAA 119
Query: 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI 190
I +TA+ + K+G+ V I A + VG Q A+ G + + S++K+
Sbjct: 120 AIPEA-FLTAWQLLKKHGDVKKGQSVLIHAGASGVGTAAAQLAEKYGAATIITTSSEEKV 178
Query: 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIA 249
D K Y +E +K+ +G+++ + VGG L + + G+
Sbjct: 179 DFCKK-LAAIILIRYPDEEGFAPKVKKLTGEKGVNLVLDCVGGSYLSETAEVLAVDGKWI 237
Query: 250 VCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR---DYY--HLYPKFLEMIIPHIKEG 304
V G + +++ NL+ L+ KR + +R D Y L F ++P+++EG
Sbjct: 238 VYGFMGGAKVEKF----NLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEG 293
Query: 305 KIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
+I + D LE L +N+GK V+ V
Sbjct: 294 EIKPIVDRTYPLEEVAEAHTFLEQNKNIGKVVLTV 328
|
Length = 334 |
| >gnl|CDD|176237 cd08276, MDR7, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 2e-14
Identities = 55/207 (26%), Positives = 83/207 (40%), Gaps = 19/207 (9%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+TA+ + + K G+ V + G V QFAK G V+ ++ S +K++ K
Sbjct: 145 GLTAWNALFGLGPLKPGDTVLVQGTGG-VSLFALQFAKAAGARVIATSSSDEKLERAK-A 202
Query: 197 FGFDEAFNYKEEPDLNEALKRYFP-EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
G D NY+ PD E + + G+D E G L + + G I++ G +S
Sbjct: 203 LGADHVINYRTTPDWGEEVLKLTGGRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLS 262
Query: 256 QYNLDRPEGVHNLMYLVTKRVRMEGFLV---RDYYHLYPKFLEMIIPHIKEGKIVYVEDM 312
E L+ L+TK + G V F M I+ +I V D
Sbjct: 263 G-----FEAPVLLLPLLTKGATLRGIAVGSRAQ-------FEAMNR-AIEAHRIRPVIDR 309
Query: 313 AEGLESAPATLIGLFSGRNVGKQVVAV 339
E A L SG + GK V+ V
Sbjct: 310 VFPFEEAKEAYRYLESGSHFGKVVIRV 336
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 336 |
| >gnl|CDD|176250 cd08290, ETR, 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Score = 72.6 bits (179), Expect = 2e-14
Identities = 69/283 (24%), Positives = 106/283 (37%), Gaps = 40/283 (14%)
Query: 81 GVAKVLD--SENPEFKKGDLVW-GMTG---WEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134
GV +V+ S K GD V G W +++V A L K+ DV L
Sbjct: 71 GVGEVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKVP-NDVDPEQA-ATLS 128
Query: 135 MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194
+ TAY + + G+ V + A+ AVGQ V Q AKLLG + + ++ LK
Sbjct: 129 VNPCTAYRLLEDFVKLQPGDWVIQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELK 188
Query: 195 N---KFGFDEAFNYKE--EPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIA 249
G D +E E LK + VGGK + + G +
Sbjct: 189 ERLKALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCVGGKSATELARLLSPGGTMV 248
Query: 250 VCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY---------HLYPKFLEMIIPH 300
G +S +P V L+ K + + GF + + + + E+
Sbjct: 249 TYGGMS----GQPVTV-PTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAEL---- 299
Query: 301 IKEGKIVYV------EDMAEGLESAPATLIGLFSGRNVGKQVV 337
I+EGK+ +D E + A A + G GKQV+
Sbjct: 300 IREGKLKAPPVEKVTDDPLEEFKDALANALKGGGG---GKQVL 339
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 341 |
| >gnl|CDD|176232 cd08271, MDR5, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 70.0 bits (172), Expect = 2e-13
Identities = 31/116 (26%), Positives = 53/116 (45%), Gaps = 4/116 (3%)
Query: 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN 195
G+TAY ++ + G + I+ +G VG Q AK G V+ + SK + +K
Sbjct: 125 AGLTAYQALFKKLRIEAGRTILITGGAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK- 182
Query: 196 KFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIAV 250
G D +Y +E D+ E +K G+D + VGG+ A+ + +G +
Sbjct: 183 SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALAPTLAFNGHLVC 237
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 325 |
| >gnl|CDD|176645 cd05282, ETR_like, 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Score = 68.8 bits (169), Expect = 3e-13
Identities = 59/259 (22%), Positives = 107/259 (41%), Gaps = 26/259 (10%)
Query: 63 IKGSYVESFKPGMP-ISGY-GVAKVLD--SENPEFKKGDLV----WGMTGWEEYSLVTAP 114
I G+Y +P +P + G GV V++ S G V T W+EY + A
Sbjct: 46 ISGAY--GSRPPLPAVPGNEGVGVVVEVGSGVSGLLVGQRVLPLGGEGT-WQEYVVAPAD 102
Query: 115 QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAK 174
L + + + P +TA+ E G+ V +AA+ AVG+++ Q AK
Sbjct: 103 DLIPVPDSISDEQAAMLYI-NP-LTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLAK 160
Query: 175 LLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK-RYFPEGIDIYFENVGGK 233
LLG + ++++ LK G DE + DL + +K G + + VGG+
Sbjct: 161 LLGFKTINVVRRDEQVEELKAL-GADEVIDS-SPEDLAQRVKEATGGAGARLALDAVGGE 218
Query: 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH----- 288
+ +++ G + G++S + P V + K + + GF +R + H
Sbjct: 219 SATRLARSLRPGGTLVNYGLLSGEPVPFPRSV-----FIFKDITVRGFWLRQWLHSATKE 273
Query: 289 LYPKFLEMIIPHIKEGKIV 307
+ +I ++ G +
Sbjct: 274 AKQETFAEVIKLVEAGVLT 292
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 323 |
| >gnl|CDD|176220 cd08259, Zn_ADH5, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 68.9 bits (169), Expect = 4e-13
Identities = 70/287 (24%), Positives = 109/287 (37%), Gaps = 37/287 (12%)
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGD--------LVWGMT--GWEEYSLVTA 113
G VE FKPG + Y + + G+ G+ EY V
Sbjct: 69 VGEGVERFKPGDRVILYYY--IPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPE 126
Query: 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFA 173
L K+ +V + TA + K+G+ V ++ A G VG Q A
Sbjct: 127 RSLVKL-PDNVSDESAA-LAACVVGTAVHAL-KRAGVKKGDTVLVTGAGGGVGIHAIQLA 183
Query: 174 KLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233
K LG V+ S +K+ +LK D + +E +K+ G D+ E VG
Sbjct: 184 KALGARVIAVTRSPEKLKILKELGA-DYVIDGS---KFSEDVKKL--GGADVVIELVGSP 237
Query: 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEG---FLVRDYYHLY 290
++ L ++ GR+ + G N+ L+ K +R+ G D
Sbjct: 238 TIEESLRSLNKGGRLVLIG-----NVTPDPAPLRPGLLILKEIRIIGSISATKADVE--- 289
Query: 291 PKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ L++ +KEGKI V D LE L L SG+ VG+ V+
Sbjct: 290 -EALKL----VKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVL 331
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine (His-51), the ribose of NAD, a serine (Ser-48), then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 332 |
| >gnl|CDD|234026 TIGR02823, oxido_YhdH, putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Score = 68.7 bits (169), Expect = 5e-13
Identities = 80/298 (26%), Positives = 122/298 (40%), Gaps = 65/298 (21%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLV----W--GMT---GWEEYSLVTAPQLFKIQHTD 123
PG+ +G V+ SE+P F++GD V + G++ G+ +Y+ V A L
Sbjct: 60 PGIDAAGT----VVSSEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWL------- 108
Query: 124 VPL-----SYYTGILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQL-VGQFA 173
VPL LG G TA + +P+ G V ++ A+G VG L V +
Sbjct: 109 VPLPEGLSLREAMALGTAGFTAALSVMALERNGLTPEDGP-VLVTGATGGVGSLAVAILS 167
Query: 174 KLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL-KRYFPEGIDIYFENVGG 232
KL G VV S G ++ D LK + G E + ++ + L K + +D VGG
Sbjct: 168 KL-GYEVVASTGKAEEEDYLK-ELGASEVIDREDLSPPGKPLEKERWAGAVD----TVGG 221
Query: 233 KMLDAVLLNMKIHGRIAVCGMISQYNLD-----------RPEGVHNLMYLVTKRVRMEGF 281
L VL +K G +A CG+ +L G+ ++ + R
Sbjct: 222 HTLANVLAQLKYGGAVAACGLAGGPDLPTTVLPFILRGVSLLGIDSVYCPMALREAAWQR 281
Query: 282 LVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
L D L P+ LE I I LE P L + +G++ G+ VV V
Sbjct: 282 LATD---LKPRNLESITREI-------------TLEELPEALEQILAGQHRGRTVVDV 323
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc [Unknown function, Enzymes of unknown specificity]. Length = 323 |
| >gnl|CDD|176183 cd05280, MDR_yhdh_yhfp, Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 66.8 bits (164), Expect = 2e-12
Identities = 56/194 (28%), Positives = 84/194 (43%), Gaps = 29/194 (14%)
Query: 85 VLDSENPEFKKGDLV------WGMT---GWEEYSLVTAPQLFKIQHTDVP--LS-YYTGI 132
V+ S++P F++GD V GM G+ EY V A + + P LS I
Sbjct: 69 VVSSDDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL-----PEGLSLREAMI 123
Query: 133 LGMPGMTAYAGFYE----VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188
LG G TA + +P+ G V ++ A+G VG + LG VV G ++
Sbjct: 124 LGTAGFTAALSVHRLEDNGQTPEDGP-VLVTGATGGVGSIAVAILAKLGYTVVALTGKEE 182
Query: 189 KIDLLKNKFGFDEAFNYKEEPDLNEA--LKRYFPEGIDIYFENVGGKMLDAVLLNMKIHG 246
+ D LK G E + ++ D ++ LK + ID VGG +L +L K G
Sbjct: 183 QADYLK-SLGASEVLDREDLLDESKKPLLKARWAGAID----TVGGDVLANLLKQTKYGG 237
Query: 247 RIAVCGMISQYNLD 260
+A CG + L
Sbjct: 238 VVASCGNAAGPELT 251
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176179 cd05195, enoyl_red, enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Score = 65.7 bits (161), Expect = 3e-12
Identities = 57/265 (21%), Positives = 108/265 (40%), Gaps = 40/265 (15%)
Query: 93 FKKGDLVWGMT--GWEEYSLVTAPQLFKIQHTD-------VPLSYYTGILGMPGMTAYAG 143
K GD V G+ + + V A + KI + +P++Y +TAY
Sbjct: 49 LKVGDRVMGLAPGAFATHVRVDARLVVKIPDSLSFEEAATLPVAY---------LTAYYA 99
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF 203
++ ++GE V I AA+G VGQ Q A+ LG V + GS++K + L+ G +
Sbjct: 100 LVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLRELGGPVDHI 159
Query: 204 NYKEEPDLNEALKRYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG---MISQYNL 259
+ + + R G+D+ ++ G++L A + GR G ++S L
Sbjct: 160 FSSRDLSFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSNSKL 219
Query: 260 DRPEGVHNLMY-------LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDM 312
+ N+ + L +R + L+R+ ++ ++ G + +
Sbjct: 220 GMRPFLRNVSFSSVDLDQLARERPELLRELLRE-----------VLELLEAGVLKPLPPT 268
Query: 313 AEGLESAPATLIGLFSGRNVGKQVV 337
S + SG+++GK V+
Sbjct: 269 VVPSASEIDAFRLMQSGKHIGKVVL 293
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains, at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 293 |
| >gnl|CDD|176213 cd08251, polyketide_synthase, polyketide synthase | Back alignment and domain information |
|---|
Score = 65.1 bits (159), Expect = 6e-12
Identities = 66/275 (24%), Positives = 109/275 (39%), Gaps = 18/275 (6%)
Query: 71 FKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWE---EYSLVTAPQLFKIQHTDVPLS 127
F PG SG V + + GD V TG +LVT P+ ++ LS
Sbjct: 39 FTPGFEASG--VVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVTVPE-DQVVRKPASLS 95
Query: 128 YYTGI-LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186
+ L + +T F +GE + I A+G G + Q A+L G + +A S
Sbjct: 96 FEEACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASS 154
Query: 187 KDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP-EGIDIYFENVGGKMLDAVLLNMKIH 245
DK++ LK + G NY EE D E + R G+D+ + G+ + L +
Sbjct: 155 DDKLEYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPG 212
Query: 246 GR---IAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIK 302
GR IA+ + S ++D + N + +R L ++ Y ++ ++
Sbjct: 213 GRYVEIAMTALKSAPSVDL-SVLSNNQSFHSVDLRKLLLLDPEFIADY---QAEMVSLVE 268
Query: 303 EGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
EG++ + L N+GK VV
Sbjct: 269 EGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Length = 303 |
| >gnl|CDD|176229 cd08268, MDR2, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 62.6 bits (153), Expect = 5e-11
Identities = 67/243 (27%), Positives = 100/243 (41%), Gaps = 33/243 (13%)
Query: 32 IELQVPK-GSNGVLLKNLYLS---CDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87
EL VP G+ VL++ + D R +G+Y+E GY A V++
Sbjct: 18 EELPVPAPGAGEVLIRVEAIGLNRADAMFR------RGAYIEPPPLPA-RLGYEAAGVVE 70
Query: 88 SENP---EFKKGDLV----------WGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTG-IL 133
+ F GD V +G EY+LV A + K D LS+ L
Sbjct: 71 AVGAGVTGFAVGDRVSVIPAADLGQYGTYA--EYALVPAAAVVK--LPDG-LSFVEAAAL 125
Query: 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLL 193
M +TAY E+ + G+ V I+AAS +VG Q A G V+ + + +K D L
Sbjct: 126 WMQYLTAYGALVELAGLRPGDSVLITAASSSVGLAAIQIANAAGATVIATTRTSEKRDAL 185
Query: 194 KNKFGFDEAFNYKEEPDLNEALKRY-FPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
G EE DL + R +G+D+ F+ VGG + + G + V G
Sbjct: 186 LAL-GAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFAKLADALAPGGTLVVYG 243
Query: 253 MIS 255
+S
Sbjct: 244 ALS 246
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 328 |
| >gnl|CDD|176205 cd08243, quinone_oxidoreductase_like_1, Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Score = 59.9 bits (146), Expect = 4e-10
Identities = 45/176 (25%), Positives = 74/176 (42%), Gaps = 21/176 (11%)
Query: 92 EFKKGDLVWGMTG---------WEEYSLVTAPQLFKIQHTDVPLSYYTGILG-MPGM--T 139
F G V G + EY+LV Q++ I D LS+ L +P T
Sbjct: 75 TFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAI---DSDLSW--AELAALPETYYT 129
Query: 140 AYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF 199
A+ + + G+ + I + +VG + AK LG V + S ++ LLK + G
Sbjct: 130 AWGSLFRSLGLQPGDTLLIRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGA 188
Query: 200 DEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
DE ++ + E L+ P G D E VG L L +++ G + + G++
Sbjct: 189 DEVV--IDDGAIAEQLRAA-PGGFDKVLELVGTATLKDSLRHLRPGGIVCMTGLLG 241
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Length = 320 |
| >gnl|CDD|214840 smart00829, PKS_ER, Enoylreductase | Back alignment and domain information |
|---|
Score = 59.3 bits (145), Expect = 4e-10
Identities = 33/119 (27%), Positives = 50/119 (42%), Gaps = 19/119 (15%)
Query: 93 FKKGDLVWGMT--GWEEYSLVTAPQLFKI-------QHTDVPLSYYTGILGMPGMTAYAG 143
GD V G+ + + A + I + VP+ + +TAY
Sbjct: 44 LAVGDRVMGLAPGAFATRVVTDARLVVPIPDGWSFEEAATVPVVF---------LTAYYA 94
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA 202
++ + GE V I AA+G VGQ Q A+ LG V +AGS +K D L+ G +
Sbjct: 95 LVDLARLRPGESVLIHAAAGGVGQAAIQLARHLGAEVFATAGSPEKRDFLRA-LGIPDD 152
|
Enoylreductase in Polyketide synthases. Length = 287 |
| >gnl|CDD|176211 cd08249, enoyl_reductase_like, enoyl_reductase_like | Back alignment and domain information |
|---|
Score = 58.7 bits (143), Expect = 9e-10
Identities = 60/277 (21%), Positives = 99/277 (35%), Gaps = 45/277 (16%)
Query: 77 ISGYGVAKV---LDSENPEFKKGDLVWGMT-----------GWEEYSLVTAPQLFKIQHT 122
I G A + S FK GD V G ++EY + A KI
Sbjct: 57 ILGCDFAGTVVEVGSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKIPDN 116
Query: 123 DVPLSYYTG-ILGMPGMTAYAGFY----------EVCSPKQGECVFISAASGAVGQLVGQ 171
+S+ L + +TA + + +G+ V I S +VG L Q
Sbjct: 117 ---ISFEEAATLPVGLVTAALALFQKLGLPLPPPKPSPASKGKPVLIWGGSSSVGTLAIQ 173
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231
AKL G V+ +A K+ DL+K G D F+Y +PD+ E ++ + + +
Sbjct: 174 LAKLAGYKVITTASPKNF-DLVK-SLGADAVFDYH-DPDVVEDIRAATGGKLRYALDCIS 230
Query: 232 GKMLDAVLLN-MKIHGRIAVCGMI-SQYNLDRPEGVH---NLMYLVTKRVRMEGFLVRDY 286
+ + G + ++ + +GV L Y V + + +
Sbjct: 231 TPESAQLCAEALGRSGGGKLVSLLPVPEETEPRKGVKVKFVLGYTVFGEIPEDREFGEVF 290
Query: 287 YHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPA 321
+ P+ LE EGK+ V + GLE
Sbjct: 291 WKYLPELLE-------EGKLKPHPVRVVEGGLEGVQE 320
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 339 |
| >gnl|CDD|176235 cd08274, MDR9, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 56.9 bits (138), Expect = 4e-09
Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 21/158 (13%)
Query: 104 GWEEYSLVTAPQLFKIQH--TDV-----PLSYYTGILGMPGMTAYAGFYEVCSPKQGECV 156
G+ EY++V A + + +DV P SY T M AG GE V
Sbjct: 132 GFAEYTVVPAENAYPVNSPLSDVELATFPCSYSTA----ENMLERAGV------GAGETV 181
Query: 157 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216
++ ASG VG + Q AK G V+ AG K + ++ G D ++ P L +A K
Sbjct: 182 LVTGASGGVGSALVQLAKRRGAIVIAVAG-AAKEEAVR-ALGAD-TVILRDAPLLADA-K 237
Query: 217 RYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMI 254
E +D+ + VGG + +L ++ GR G I
Sbjct: 238 ALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAI 275
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 350 |
| >gnl|CDD|176217 cd08255, 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like, 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Score = 56.1 bits (136), Expect = 5e-09
Identities = 46/180 (25%), Positives = 64/180 (35%), Gaps = 20/180 (11%)
Query: 79 GY-GVAKVLD--SENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVP--LSYYTGIL 133
GY V +V++ S FK GD V+ E +V A L +P L L
Sbjct: 25 GYSSVGRVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVP-----LPDGLPPERAAL 79
Query: 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLL 193
TA G P+ GE V + G VG L Q AK G V +D
Sbjct: 80 TALAATALNGV-RDAEPRLGERVAVVGL-GLVGLLAAQLAKAAGAREV------VGVDPD 131
Query: 194 KNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCG 252
+ EA +P + G D+ E G L+ L ++ GR+ + G
Sbjct: 132 AARRELAEALG-PADPVAADTADEIGGRGADVVIEASGSPSALETALRLLRDRGRVVLVG 190
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. Length = 277 |
| >gnl|CDD|176206 cd08244, MDR_enoyl_red, Possible enoyl reductase | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 5e-09
Identities = 57/208 (27%), Positives = 87/208 (41%), Gaps = 29/208 (13%)
Query: 65 GSYVESFKPGMP-ISGYGVAKVLDSENPEFKKGDLVW-----------GMTGWEEYSLVT 112
G F P +P + G VA V+D+ P D W G+ E ++
Sbjct: 49 GWGPGPFPPELPYVPGGEVAGVVDAVGPG---VDPAWLGRRVVAHTGRAGGGYAELAVAD 105
Query: 113 APQLFKI-QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQ 171
L + D+ + + G TA G ++ + G+ V ++AA+G +G L+ Q
Sbjct: 106 VDSLHPVPDGLDLEAA---VAVVHDGRTA-LGLLDLATLTPGDVVLVTAAAGGLGSLLVQ 161
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD----LNEALKRYFPEGIDIYF 227
AK G VVG+AG K L++ G D A +Y PD + EAL G+ +
Sbjct: 162 LAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYT-RPDWPDQVREALG---GGGVTVVL 216
Query: 228 ENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
+ VGG + A L + GR G S
Sbjct: 217 DGVGGAIGRAALALLAPGGRFLTYGWAS 244
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|176249 cd08289, MDR_yhfp_like, Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 56.2 bits (136), Expect = 7e-09
Identities = 64/205 (31%), Positives = 93/205 (45%), Gaps = 41/205 (20%)
Query: 71 FKPGMPISGYGVAKVLDSENPEFKKGDLV------WGMT---GWEEYSLVTAPQLFKIQH 121
F PG+ ++G V++S +P FK GD V G++ G+ EY+ V A +
Sbjct: 59 FIPGIDLAG----TVVESNDPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWV----- 109
Query: 122 TDVPLSYYTG-------ILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQLVG 170
VPL G ILG G TA + + +P+QG V ++ A+G VG L
Sbjct: 110 --VPLP--KGLTLKEAMILGTAGFTAALSIHRLEENGLTPEQGP-VLVTGATGGVGSLAV 164
Query: 171 QFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE-PDLNEAL-KRYFPEGIDIYFE 228
LG VV S G D D LK K G E +E + + L K+ + +D
Sbjct: 165 SILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREELQEESIKPLEKQRWAGAVD---- 219
Query: 229 NVGGKMLDAVLLNMKIHGRIAVCGM 253
VGGK L +L ++ G +AV G+
Sbjct: 220 PVGGKTLAYLLSTLQYGGSVAVSGL 244
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site, and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 326 |
| >gnl|CDD|176210 cd08248, RTN4I1, Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Score = 54.2 bits (131), Expect = 3e-08
Identities = 43/151 (28%), Positives = 60/151 (39%), Gaps = 19/151 (12%)
Query: 93 FKKGDLVWGMTGWE------EYSLVTAPQLFKIQHTDVPLSYYTGI-LGMPGMTAYAGFY 145
F+ GD VWG EY V P+ ++ LS+ L G+TA++
Sbjct: 95 FEIGDEVWGAVPPWSQGTHAEY--VVVPE-NEVSKKPKNLSHEEAASLPYAGLTAWSALV 151
Query: 146 EVC----SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE 201
V G+ V I SG VG Q K G +V + S D I L+K G D+
Sbjct: 152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTC-STDAIPLVK-SLGADD 209
Query: 202 AFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232
+Y E E +R D+ + VGG
Sbjct: 210 VIDYNNEDFEEELTER---GKFDVILDTVGG 237
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 350 |
| >gnl|CDD|176234 cd08273, MDR8, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 53.4 bits (129), Expect = 6e-08
Identities = 43/167 (25%), Positives = 69/167 (41%), Gaps = 17/167 (10%)
Query: 93 FKKGDLVWGMT---GWEEYSLVTAPQLFKI-QHTDVPLSYYTGILGMP--GMTAYAGFYE 146
F+ GD V +T G EY + A L + + D + + +TAY +
Sbjct: 79 FEVGDRVAALTRVGGNAEYINLDAKYLVPVPEGVDA-----AEAVCLVLNYVTAYQMLHR 133
Query: 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYK 206
G+ V I ASG VGQ + + A L G V G+A S+ L+ +Y+
Sbjct: 134 AAKVLTGQRVLIHGASGGVGQALLELALLAGAEVYGTA-SERNHAALRELGA--TPIDYR 190
Query: 207 EEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGM 253
+ D A+ P G+D+ F+ VGG+ + + G + G
Sbjct: 191 TK-DWLPAMLT--PGGVDVVFDGVGGESYEESYAALAPGGTLVCYGG 234
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 331 |
| >gnl|CDD|176225 cd08264, Zn_ADH_like2, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 53.1 bits (128), Expect = 6e-08
Identities = 42/153 (27%), Positives = 63/153 (41%), Gaps = 20/153 (13%)
Query: 104 GWEEYSLVTAPQLFKIQHTDVPLSYYTGI---LGMPGMTAYAGFYEV-CSPKQGECVFIS 159
G+ EY +V LFKI P S + L + +TAY P GE V +
Sbjct: 117 GYAEYIVVPEKNLFKI-----PDSISDELAASLPVAALTAYHALKTAGLGP--GETVVVF 169
Query: 160 AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219
ASG G Q AK++G V+ + LK +FG DE +Y E + + + +
Sbjct: 170 GASGNTGIFAVQLAKMMGAEVIAVSRKDW----LK-EFGADEVVDYDEVEEKVKEITKMA 224
Query: 220 PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
D+ ++G D L + GR+ G
Sbjct: 225 ----DVVINSLGSSFWDLSLSVLGRGGRLVTFG 253
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 325 |
| >gnl|CDD|176248 cd08288, MDR_yhdh, Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Score = 51.4 bits (124), Expect = 2e-07
Identities = 79/314 (25%), Positives = 118/314 (37%), Gaps = 85/314 (27%)
Query: 71 FKPGMPISGYG-VAK-------------VLDSENPEFKKGDLV----W--GMTGWEEYS- 109
+K G+ I+G G + + V++S +P FK GD V W G W Y+
Sbjct: 41 YKDGLAITGKGGIVRTFPLVPGIDLAGTVVESSSPRFKPGDRVVLTGWGVGERHWGGYAQ 100
Query: 110 --------LVTAPQLFKIQHTDVPLSYYTGILGMPGMTAY--------AGFYEVCSPKQG 153
LV P+ + +G G TA G +P G
Sbjct: 101 RARVKADWLVPLPEGLSARQA--------MAIGTAGFTAMLCVMALEDHGV----TPGDG 148
Query: 154 ECVFISAASGAVGQL-VGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212
V ++ A+G VG + V A+L G VV S G ++ D L++ G E + E +
Sbjct: 149 P-VLVTGAAGGVGSVAVALLARL-GYEVVASTGRPEEADYLRS-LGASEIIDRAELSEPG 205
Query: 213 EAL-KRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPE-------- 263
L K + +D VGG L VL + G +A CG+ D P
Sbjct: 206 RPLQKERWAGAVD----TVGGHTLANVLAQTRYGGAVAACGLAG--GADLPTTVMPFILR 259
Query: 264 -----GVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLES 318
G+ ++M + +R L RD L P LE + I +A+ ++
Sbjct: 260 GVTLLGIDSVMAPIERRRAAWARLARD---LDPALLEALTREIP---------LADVPDA 307
Query: 319 APATLIGLFSGRNV 332
A A L G GR V
Sbjct: 308 AEAILAGQVRGRVV 321
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 324 |
| >gnl|CDD|184316 PRK13771, PRK13771, putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Score = 50.4 bits (121), Expect = 5e-07
Identities = 73/290 (25%), Positives = 113/290 (38%), Gaps = 43/290 (14%)
Query: 64 KGSYVESFKPGMPISGY-----GVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQ 115
G V+ FKPG ++ G + S + K L +G + EY+ V
Sbjct: 69 VGENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTS 128
Query: 116 LFKIQHTDVP---LSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQF 172
L K+ +V + GM Y G K+GE V ++ A G VG Q
Sbjct: 129 LVKVP-PNVSDEGAVIVPCVTGM----VYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQV 182
Query: 173 AKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232
AK LG V+ S+ K ++ K+ K +E +K+ G DI E VG
Sbjct: 183 AKALGAKVIAVTSSESKAKIVS-KYADYVIVGSK----FSEEVKKI--GGADIVIETVGT 235
Query: 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM--YLVTKRVRMEGFLV---RDYY 287
L+ L ++ + G+I G N+D P ++L Y++ K + + G + RD
Sbjct: 236 PTLEESLRSLNMGGKIIQIG-----NVD-PSPTYSLRLGYIILKDIEIIGHISATKRD-- 287
Query: 288 HLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+E + + EGKI V L L L +GK +V
Sbjct: 288 ------VEEALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILV 331
|
Length = 334 |
| >gnl|CDD|223991 COG1063, Tdh, Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Score = 50.1 bits (120), Expect = 8e-07
Identities = 54/229 (23%), Positives = 84/229 (36%), Gaps = 31/229 (13%)
Query: 104 GWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM---PGMTAYAGFYEVCSPKQGECVFISA 160
G+ EY V A + P TAY G E + + G V +
Sbjct: 122 GFAEYVRVPADFNLAKLPDGIDE-----EAAALTEPLATAYHGHAERAAVRPGGTVVVVG 176
Query: 161 ASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219
A G +G L AKLLG V+ S ++++L K G D N E+ E L+
Sbjct: 177 A-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSEDDAGAEILELTG 235
Query: 220 PEGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRM 278
G D+ E VG LD L ++ G + V G+ + +V+K + +
Sbjct: 236 GRGADVVIEAVGSPPALDQALEALRPGGTVVVVGVYGG-----EDIPLPAGLVVSKELTL 290
Query: 279 EGFLVRDYYHLYPKFLEMI----------IPHIKEGKIVYVEDMAEGLE 317
G L + + L+++ I H ++D AE E
Sbjct: 291 RGSLRPSGREDFERALDLLASGKIDPEKLITHRLP-----LDDAAEAYE 334
|
Length = 350 |
| >gnl|CDD|223992 COG1064, AdhP, Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Score = 49.9 bits (120), Expect = 8e-07
Identities = 60/245 (24%), Positives = 98/245 (40%), Gaps = 33/245 (13%)
Query: 99 VWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFI 158
G G+ EY +V A + KI + L L G+T Y + + K G+ V +
Sbjct: 118 TDG--GYAEYVVVPARYVVKIPE-GLDL-AEAAPLLCAGITTYRAL-KKANVKPGKWVAV 172
Query: 159 SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRY 218
A G +G + Q+AK +G V+ S++K++L K K G D N + D EA+K
Sbjct: 173 VGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSS-DSDALEAVKEI 229
Query: 219 FPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG-MISQYNLDRPEGVHNLMYLVTKRVR 277
D + VG L+ L ++ G + + G P L+ K +
Sbjct: 230 A----DAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGPIPLLPAF-----LLILKEIS 280
Query: 278 MEGFLV---RDYYHLYPKFLEMIIPHIKEGKI--VYVEDMAEGLESAPATLIGLFSGRNV 332
+ G LV D + L+ EGKI +E + L+ + G+
Sbjct: 281 IVGSLVGTRAD----LEEALDF----AAEGKIKPEILETI--PLDEINEAYERMEKGKVR 330
Query: 333 GKQVV 337
G+ V+
Sbjct: 331 GRAVI 335
|
Length = 339 |
| >gnl|CDD|176224 cd08263, Zn_ADH10, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 49.3 bits (118), Expect = 1e-06
Identities = 39/165 (23%), Positives = 63/165 (38%), Gaps = 8/165 (4%)
Query: 93 FKKGDLVW--GMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP 150
G V+ M G EY++V A L + + + +LG G TAY
Sbjct: 128 RLDGGPVYMYSMGGLAEYAVVPATALAPLP-ESLDY-TESAVLGCAGFTAYGALKHAADV 185
Query: 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKFGFDEAFNYKEEP 209
+ GE V + G VG Q AK G + + +K+ K + G N +E
Sbjct: 186 RPGETVAVIGV-GGVGSSAIQLAKAFGASPIIAVDVRDEKLAKAK-ELGATHTVNAAKED 243
Query: 210 DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGM 253
+ + G+D+ E +G + L ++ GR V G+
Sbjct: 244 AVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGL 288
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 367 |
| >gnl|CDD|176251 cd08291, ETR_like_1, 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Score = 46.8 bits (112), Expect = 6e-06
Identities = 42/154 (27%), Positives = 72/154 (46%), Gaps = 12/154 (7%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TA G E + + V +AA+ A+G+++ + K G V+ K+++DLLK K
Sbjct: 130 LTAL-GMLETAREEGAKAVVHTAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KI 187
Query: 198 GFDEAFNYKEE---PDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMI 254
G + N + DL E + + I+F+ VGG + +LL M + V G +
Sbjct: 188 GAEYVLNSSDPDFLEDLKELIAK---LNATIFFDAVGGGLTGQILLAMPYGSTLYVYGYL 244
Query: 255 SQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288
S LD P + + L+ K +EGF + +
Sbjct: 245 SG-KLDEPI---DPVDLIFKNKSIEGFWLTTWLQ 274
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H) binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. Candida tropicalis enoyl thioester reductase (Etr1p) catalyzes the NADPH-dependent reduction of trans-2-enoyl thioesters in mitochondrial fatty acid synthesis. Etr1p forms homodimers, with each subunit containing a nucleotide-binding Rossmann fold domain and a catalytic domain. Length = 324 |
| >gnl|CDD|188164 TIGR01751, crot-CoA-red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 46.7 bits (111), Expect = 8e-06
Identities = 70/323 (21%), Positives = 116/323 (35%), Gaps = 69/323 (21%)
Query: 65 GSYVESFKPGMPISGYGVAKVLDSENPEFKKGD-------LVWGMT----GWEEYSLVTA 113
G V +K G + + +D P+ + GD +WG + E++LV
Sbjct: 93 GPGVTRWKVGDEVVASCL--QVDLTAPDGRDGDPMLSSEQRIWGYETNFGSFAEFALVKD 150
Query: 114 PQLF-KIQHTDVPLSYY-TGILGMPGMTAYAGFYEVCSP-----KQGECVFISAASGAVG 166
QL K +H L++ G+ G TAY ++ K G+ V I A+G +G
Sbjct: 151 YQLMPKPKH----LTWEEAACPGLTGATAYR---QLVGWNPAAVKPGDNVLIWGAAGGLG 203
Query: 167 QLVGQFAKLLGCYVVGSAGSKDKID----------LLKNKFGFDEAFNYKEEPDLN-EAL 215
Q A+ G V S +K + + +N FG PD N +A
Sbjct: 204 SYATQLARAGGGNPVAVVSSPEKAEYCRSLGAEAVIDRNDFGHWG-----RLPDHNTQAP 258
Query: 216 KRYFP---------------EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLD 260
K + E DI FE+ G + + G + +CG + YN D
Sbjct: 259 KEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVYVCRRGGMVVICGGTTGYNHD 318
Query: 261 RPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAP 320
++ YL ++ R++G + Y + ++ +G+I LE
Sbjct: 319 -----YDNRYLWMRQKRIQGSHFANLREAY-EANRLVA----KGRIDPTLSKTYPLEEIG 368
Query: 321 ATLIGLFSGRNVGKQVVAV-APE 342
+ + G V V AP
Sbjct: 369 QAHQDVHRNHHQGNVAVLVLAPR 391
|
The enzyme modelled by This model is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. Length = 398 |
| >gnl|CDD|223990 COG1062, AdhC, Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Score = 45.7 bits (109), Expect = 2e-05
Identities = 40/132 (30%), Positives = 56/132 (42%), Gaps = 5/132 (3%)
Query: 101 GMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160
G + + EY++V L KI D PL +LG T + G+ V +
Sbjct: 136 GCSTFAEYTVVHEISLVKIDP-DAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFG 193
Query: 161 ASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219
G VG Q AK G ++ + +K++L K KFG N KE D+ EA+
Sbjct: 194 L-GGVGLAAIQGAKAAGAGRIIAVDINPEKLELAK-KFGATHFVNPKEVDDVVEAIVELT 251
Query: 220 PEGIDIYFENVG 231
G D FE VG
Sbjct: 252 DGGADYAFECVG 263
|
Length = 366 |
| >gnl|CDD|182701 PRK10754, PRK10754, quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Score = 45.5 bits (108), Expect = 2e-05
Identities = 25/72 (34%), Positives = 35/72 (48%), Gaps = 1/72 (1%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+T Y + K E AA+G VG + Q+AK LG ++G+ GS K K
Sbjct: 125 GLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGSAQKAQRAKKA 184
Query: 197 FGFDEAFNYKEE 208
G + NY+EE
Sbjct: 185 -GAWQVINYREE 195
|
Length = 327 |
| >gnl|CDD|176216 cd08254, hydroxyacyl_CoA_DH, 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Score = 44.2 bits (105), Expect = 5e-05
Identities = 43/172 (25%), Positives = 72/172 (41%), Gaps = 17/172 (9%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
+T Y K GE V + G +G Q AK +G V+ ++K++L K +
Sbjct: 150 VLTPYHAVVRAGEVKPGETVLVIGL-GGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-E 207
Query: 197 FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK--MLDAVLLNMKIHGRIAVCGMI 254
G DE N ++ ++ G D+ F+ VG + DA +K GRI V G
Sbjct: 208 LGADEVLNSLDDSPKDKKAAG-LGGGFDVIFDFVGTQPTFEDAQKA-VKPGGRIVVVG-- 263
Query: 255 SQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI 306
L R + +L L+ + +R+ G + E ++ I +GK+
Sbjct: 264 ----LGRDKLTVDLSDLIARELRIIG----SFGGTPEDLPE-VLDLIAKGKL 306
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit, a catalytic zinc at the active site and a structural zinc in a lobe of the catalytic domain. NAD(H)-binding occurs in the cleft between the catalytic and coenzyme-binding domains at the active site, and coenzyme binding induces a conformational closing of this cleft. Coenzyme binding typically precedes and contributes to substrate binding. In human ADH catalysis, the zinc ion helps coordinate the alcohol, followed by deprotonation of a histidine, the ribose of NAD, a serine, then the alcohol, which allows the transfer of a hydride to NAD+, creating NADH and a zinc-bound aldehyde or ketone. In yeast and some bacteria, the active site zinc binds an aldehyde, polarizing it, and leading to the reverse reaction. Length = 338 |
| >gnl|CDD|176231 cd08270, MDR4, Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 6e-05
Identities = 31/123 (25%), Positives = 47/123 (38%), Gaps = 11/123 (8%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
L + G+TA P G V ++ ASG VG+ Q A L G +VV GS + +
Sbjct: 114 LPVAGVTALRALRRG-GPLLGRRVLVTGASGGVGRFAVQLAALAGAHVVAVVGSPARAEG 172
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
L+ + E +D+ ++VGG L L + G + G
Sbjct: 173 LRELGAAEVVVGGSELSG----------APVDLVVDSVGGPQLARALELLAPGGTVVSVG 222
Query: 253 MIS 255
S
Sbjct: 223 SSS 225
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 305 |
| >gnl|CDD|176208 cd08246, crotonyl_coA_red, crotonyl-CoA reductase | Back alignment and domain information |
|---|
Score = 43.9 bits (104), Expect = 7e-05
Identities = 49/225 (21%), Positives = 82/225 (36%), Gaps = 45/225 (20%)
Query: 89 ENPEFKKGDLVWGM-TGW---EEYSLVTAPQLF-KIQHTDVPLSYY-TGILGMPGMTAYA 142
+P F +WG T + +++LV A QL K +H LS+ + G TAY
Sbjct: 126 GDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPKPKH----LSWEEAAAYMLVGATAYR 181
Query: 143 GFYEVCSP-----KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK--- 194
+ K G+ V I ASG +G + Q A+ G V S++K + +
Sbjct: 182 MLF---GWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCRALG 238
Query: 195 -----------NKFGFDEAFNYKEEPDLNEAL---KRYFP-----EGIDIYFENVGGKML 235
+ + + EA K + E DI FE+ G
Sbjct: 239 AEGVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATF 298
Query: 236 DAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEG 280
+ G + +C + YN ++ YL ++ R++G
Sbjct: 299 PTSVFVCDRGGMVVICAGTTGYNHT-----YDNRYLWMRQKRIQG 338
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. Length = 393 |
| >gnl|CDD|176257 cd08297, CAD3, Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Score = 43.7 bits (104), Expect = 7e-05
Identities = 24/80 (30%), Positives = 40/80 (50%), Gaps = 2/80 (2%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+T Y + K G+ V IS A G +G L Q+AK +G V+ +K++L K +
Sbjct: 151 GVTVYKAL-KKAGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-E 208
Query: 197 FGFDEAFNYKEEPDLNEALK 216
G D ++K+ D+ +
Sbjct: 209 LGADAFVDFKKSDDVEAVKE 228
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 341 |
| >gnl|CDD|176196 cd08234, threonine_DH_like, L-threonine dehydrogenase | Back alignment and domain information |
|---|
Score = 43.3 bits (103), Expect = 1e-04
Identities = 54/190 (28%), Positives = 76/190 (40%), Gaps = 41/190 (21%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLV---------------------------WGMT-- 103
PG +G V V S+ FK GD V G+T
Sbjct: 56 PGHEFAGV-VVAV-GSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRN 113
Query: 104 -GWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162
G+ EY +V A Q++KI LS+ L P A G ++ K G+ V + A
Sbjct: 114 GGFAEYVVVPAKQVYKIPDN---LSFEEAALAEPLSCAVHG-LDLLGIKPGDSVLVFGA- 168
Query: 163 GAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE 221
G +G L+ Q KL G V + +++K++L K K G E + E EA K P
Sbjct: 169 GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSREDP--EAQKEDNPY 225
Query: 222 GIDIYFENVG 231
G D+ E G
Sbjct: 226 GFDVVIEATG 235
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Length = 334 |
| >gnl|CDD|176207 cd08245, CAD, Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Score = 38.8 bits (91), Expect = 0.003
Identities = 36/118 (30%), Positives = 52/118 (44%), Gaps = 9/118 (7%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+T Y+ P+ GE V + G +G L Q+A+ +G V S DK +L + K
Sbjct: 148 GITVYSAL-RDAGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-K 204
Query: 197 FGFDEAFNYKEEPDLNEALKRYFPEGID-IYFENVGGKMLDAVLLNMKIHGRIAVCGM 253
G DE + E D A G D I V G +A L ++ GRI + G+
Sbjct: 205 LGADEVVDSGAELDEQAAAG-----GADVILVTVVSGAAAEAALGGLRRGGRIVLVGL 257
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes, or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 330 |
| >gnl|CDD|176222 cd08261, Zn_ADH7, Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Score = 38.7 bits (91), Expect = 0.003
Identities = 24/92 (26%), Positives = 41/92 (44%), Gaps = 6/92 (6%)
Query: 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209
G+ V + A G +G V Q AK G V+ ++++ + + G D+ N +E
Sbjct: 157 VTAGDTVLVVGA-GPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE- 213
Query: 210 DLNEALKRYFP-EGIDIYFENVGGK--MLDAV 238
D+ L+ EG D+ + G M +AV
Sbjct: 214 DVAARLRELTDGEGADVVIDATGNPASMEEAV 245
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Active site zinc has a catalytic role, while structural zinc aids in stability. ADH-like proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc atoms per subunit. The active site zinc is coordinated by a histidine, two cysteines, and a water molecule. The second zinc seems to play a structural role, affects subunit interactions, and is typically coordinated by 4 cysteines. Length = 337 |
| >gnl|CDD|176198 cd08236, sugar_DH, NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Score = 38.4 bits (90), Expect = 0.003
Identities = 20/71 (28%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 162 SGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP 220
+G +G L Q+ K+LG V+ +K+ + + + G D+ N KEE D+ + +
Sbjct: 168 AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-DVEKVRELTEG 225
Query: 221 EGIDIYFENVG 231
G D+ E G
Sbjct: 226 RGADLVIEAAG 236
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Horse liver alcohol dehydrogenase is a dimeric enzyme and each subunit has two domains. The NAD binding domain is in a Rossmann fold and the catalytic domain contains a zinc ion to which substrates bind. There is a cleft between the domains that closes upon formation of the ternary complex. Length = 343 |
Conserved Domains Detected by HHsearch
Original result of HHsearch against CDD database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 342 | |||
| COG1064 | 339 | AdhP Zn-dependent alcohol dehydrogenases [General | 100.0 | |
| COG0604 | 326 | Qor NADPH:quinone reductase and related Zn-depende | 100.0 | |
| KOG1197 | 336 | consensus Predicted quinone oxidoreductase [Energy | 100.0 | |
| PLN03154 | 348 | putative allyl alcohol dehydrogenase; Provisional | 100.0 | |
| KOG0023 | 360 | consensus Alcohol dehydrogenase, class V [Secondar | 100.0 | |
| COG2130 | 340 | Putative NADP-dependent oxidoreductases [General f | 100.0 | |
| cd08295 | 338 | double_bond_reductase_like Arabidopsis alkenal dou | 100.0 | |
| COG1062 | 366 | AdhC Zn-dependent alcohol dehydrogenases, class II | 100.0 | |
| KOG0024 | 354 | consensus Sorbitol dehydrogenase [Secondary metabo | 100.0 | |
| cd08281 | 371 | liver_ADH_like1 Zinc-dependent alcohol dehydrogena | 100.0 | |
| KOG0022 | 375 | consensus Alcohol dehydrogenase, class III [Second | 100.0 | |
| cd08293 | 345 | PTGR2 Prostaglandin reductase. Prostaglandins and | 100.0 | |
| TIGR03451 | 358 | mycoS_dep_FDH mycothiol-dependent formaldehyde deh | 100.0 | |
| cd08294 | 329 | leukotriene_B4_DH_like 13-PGR is a bifunctional en | 100.0 | |
| cd08239 | 339 | THR_DH_like L-threonine dehydrogenase (TDH)-like. | 100.0 | |
| KOG0025 | 354 | consensus Zn2+-binding dehydrogenase (nuclear rece | 100.0 | |
| cd08291 | 324 | ETR_like_1 2-enoyl thioester reductase (ETR) like | 100.0 | |
| PLN02740 | 381 | Alcohol dehydrogenase-like | 100.0 | |
| PLN02586 | 360 | probable cinnamyl alcohol dehydrogenase | 100.0 | |
| PRK09880 | 343 | L-idonate 5-dehydrogenase; Provisional | 100.0 | |
| TIGR02825 | 325 | B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15 | 100.0 | |
| KOG1196 | 343 | consensus Predicted NAD-dependent oxidoreductase [ | 100.0 | |
| cd08301 | 369 | alcohol_DH_plants Plant alcohol dehydrogenase. NAD | 100.0 | |
| TIGR02822 | 329 | adh_fam_2 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| PLN02827 | 378 | Alcohol dehydrogenase-like | 100.0 | |
| TIGR02818 | 368 | adh_III_F_hyde S-(hydroxymethyl)glutathione dehydr | 100.0 | |
| cd08300 | 368 | alcohol_DH_class_III class III alcohol dehydrogena | 100.0 | |
| PLN02178 | 375 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| PLN02514 | 357 | cinnamyl-alcohol dehydrogenase | 100.0 | |
| cd08277 | 365 | liver_alcohol_DH_like Liver alcohol dehydrogenase. | 100.0 | |
| PRK10309 | 347 | galactitol-1-phosphate dehydrogenase; Provisional | 100.0 | |
| cd08292 | 324 | ETR_like_2 2-enoyl thioester reductase (ETR) like | 100.0 | |
| cd08233 | 351 | butanediol_DH_like (2R,3R)-2,3-butanediol dehydrog | 100.0 | |
| TIGR03201 | 349 | dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-Co | 100.0 | |
| cd08238 | 410 | sorbose_phosphate_red L-sorbose-1-phosphate reduct | 100.0 | |
| cd08237 | 341 | ribitol-5-phosphate_DH ribitol-5-phosphate dehydro | 100.0 | |
| KOG1198 | 347 | consensus Zinc-binding oxidoreductase [Energy prod | 100.0 | |
| TIGR02819 | 393 | fdhA_non_GSH formaldehyde dehydrogenase, glutathio | 100.0 | |
| cd08230 | 355 | glucose_DH Glucose dehydrogenase. Glucose dehydrog | 100.0 | |
| cd08231 | 361 | MDR_TM0436_like Hypothetical enzyme TM0436 resembl | 100.0 | |
| cd08246 | 393 | crotonyl_coA_red crotonyl-CoA reductase. Crotonyl- | 100.0 | |
| TIGR01202 | 308 | bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyl | 100.0 | |
| cd08296 | 333 | CAD_like Cinnamyl alcohol dehydrogenases (CAD). Ci | 100.0 | |
| TIGR02817 | 336 | adh_fam_1 zinc-binding alcohol dehydrogenase famil | 100.0 | |
| cd08290 | 341 | ETR 2-enoyl thioester reductase (ETR). 2-enoyl thi | 100.0 | |
| COG1063 | 350 | Tdh Threonine dehydrogenase and related Zn-depende | 100.0 | |
| cd08278 | 365 | benzyl_alcohol_DH Benzyl alcohol dehydrogenase. Be | 100.0 | |
| cd08244 | 324 | MDR_enoyl_red Possible enoyl reductase. Member ide | 100.0 | |
| cd05288 | 329 | PGDH Prostaglandin dehydrogenases. Prostaglandins | 100.0 | |
| PRK10754 | 327 | quinone oxidoreductase, NADPH-dependent; Provision | 100.0 | |
| TIGR01751 | 398 | crot-CoA-red crotonyl-CoA reductase. The enzyme mo | 100.0 | |
| cd08274 | 350 | MDR9 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08263 | 367 | Zn_ADH10 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08250 | 329 | Mgc45594_like Mgc45594 gene product and other MDR | 100.0 | |
| cd05284 | 340 | arabinose_DH_like D-arabinose dehydrogenase. This | 100.0 | |
| cd08240 | 350 | 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehy | 100.0 | |
| PTZ00354 | 334 | alcohol dehydrogenase; Provisional | 100.0 | |
| cd08297 | 341 | CAD3 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08260 | 345 | Zn_ADH6 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08285 | 351 | NADP_ADH NADP(H)-dependent alcohol dehydrogenases. | 100.0 | |
| cd05282 | 323 | ETR_like 2-enoyl thioester reductase-like. 2-enoyl | 100.0 | |
| cd08261 | 337 | Zn_ADH7 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd05278 | 347 | FDH_like Formaldehyde dehydrogenases. Formaldehyde | 100.0 | |
| cd08283 | 386 | FDH_like_1 Glutathione-dependent formaldehyde dehy | 100.0 | |
| PRK10083 | 339 | putative oxidoreductase; Provisional | 100.0 | |
| cd05280 | 325 | MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone | 100.0 | |
| PRK09422 | 338 | ethanol-active dehydrogenase/acetaldehyde-active r | 100.0 | |
| cd08270 | 305 | MDR4 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08249 | 339 | enoyl_reductase_like enoyl_reductase_like. Member | 100.0 | |
| cd08235 | 343 | iditol_2_DH_like L-iditol 2-dehydrogenase. Putativ | 100.0 | |
| cd08289 | 326 | MDR_yhfp_like Yhfp putative quinone oxidoreductase | 100.0 | |
| cd08286 | 345 | FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08299 | 373 | alcohol_DH_class_I_II_IV class I, II, IV alcohol d | 100.0 | |
| cd08243 | 320 | quinone_oxidoreductase_like_1 Quinone oxidoreducta | 100.0 | |
| cd08279 | 363 | Zn_ADH_class_III Class III alcohol dehydrogenase. | 100.0 | |
| PRK13771 | 334 | putative alcohol dehydrogenase; Provisional | 100.0 | |
| TIGR02823 | 323 | oxido_YhdH putative quinone oxidoreductase, YhdH/Y | 100.0 | |
| cd08254 | 338 | hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carbo | 100.0 | |
| cd08282 | 375 | PFDH_like Pseudomonas putida aldehyde-dismutating | 100.0 | |
| cd08284 | 344 | FDH_like_2 Glutathione-dependent formaldehyde dehy | 100.0 | |
| cd08256 | 350 | Zn_ADH2 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08262 | 341 | Zn_ADH8 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08236 | 343 | sugar_DH NAD(P)-dependent sugar dehydrogenases. Th | 100.0 | |
| cd05283 | 337 | CAD1 Cinnamyl alcohol dehydrogenases (CAD). Cinnam | 100.0 | |
| PRK05396 | 341 | tdh L-threonine 3-dehydrogenase; Validated | 100.0 | |
| cd08259 | 332 | Zn_ADH5 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08276 | 336 | MDR7 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05279 | 365 | Zn_ADH1 Liver alcohol dehydrogenase and related zi | 100.0 | |
| cd08287 | 345 | FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-lik | 100.0 | |
| cd08252 | 336 | AL_MDR Arginate lyase and other MDR family members | 100.0 | |
| cd08253 | 325 | zeta_crystallin Zeta-crystallin with NADP-dependen | 100.0 | |
| cd05286 | 320 | QOR2 Quinone oxidoreductase (QOR). Quinone oxidore | 100.0 | |
| cd08266 | 342 | Zn_ADH_like1 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08247 | 352 | AST1_like AST1 is a cytoplasmic protein associated | 100.0 | |
| cd08288 | 324 | MDR_yhdh Yhdh putative quinone oxidoreductases. Yh | 100.0 | |
| cd05276 | 323 | p53_inducible_oxidoreductase PIG3 p53-inducible qu | 100.0 | |
| cd05281 | 341 | TDH Threonine dehydrogenase. L-threonine dehydroge | 100.0 | |
| cd08269 | 312 | Zn_ADH9 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08248 | 350 | RTN4I1 Human Reticulon 4 Interacting Protein 1. Hu | 100.0 | |
| cd08298 | 329 | CAD2 Cinnamyl alcohol dehydrogenases (CAD). These | 100.0 | |
| cd08234 | 334 | threonine_DH_like L-threonine dehydrogenase. L-thr | 100.0 | |
| cd08264 | 325 | Zn_ADH_like2 Alcohol dehydrogenases of the MDR fam | 100.0 | |
| cd08273 | 331 | MDR8 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05285 | 343 | sorbitol_DH Sorbitol dehydrogenase. Sorbitol and a | 100.0 | |
| cd08268 | 328 | MDR2 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR00692 | 340 | tdh L-threonine 3-dehydrogenase. E. coli His-90 mo | 100.0 | |
| cd08265 | 384 | Zn_ADH3 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08271 | 325 | MDR5 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd08232 | 339 | idonate-5-DH L-idonate 5-dehydrogenase. L-idonate | 100.0 | |
| cd08272 | 326 | MDR6 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| TIGR02824 | 325 | quinone_pig3 putative NAD(P)H quinone oxidoreducta | 100.0 | |
| cd08251 | 303 | polyketide_synthase polyketide synthase. Polyketid | 100.0 | |
| PLN02702 | 364 | L-idonate 5-dehydrogenase | 100.0 | |
| cd08242 | 319 | MDR_like Medium chain dehydrogenases/reductase (MD | 100.0 | |
| cd08258 | 306 | Zn_ADH4 Alcohol dehydrogenases of the MDR family. | 100.0 | |
| cd08245 | 330 | CAD Cinnamyl alcohol dehydrogenases (CAD) and rela | 100.0 | |
| cd08241 | 323 | QOR1 Quinone oxidoreductase (QOR). QOR catalyzes t | 100.0 | |
| cd05289 | 309 | MDR_like_2 alcohol dehydrogenase and quinone reduc | 100.0 | |
| cd08275 | 337 | MDR3 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| cd05195 | 293 | enoyl_red enoyl reductase of polyketide synthase. | 100.0 | |
| cd08267 | 319 | MDR1 Medium chain dehydrogenases/reductase (MDR)/z | 100.0 | |
| KOG1202 | 2376 | consensus Animal-type fatty acid synthase and rela | 100.0 | |
| smart00829 | 288 | PKS_ER Enoylreductase. Enoylreductase in Polyketid | 100.0 | |
| TIGR03366 | 280 | HpnZ_proposed putative phosphonate catabolism asso | 100.0 | |
| cd05188 | 271 | MDR Medium chain reductase/dehydrogenase (MDR)/zin | 99.97 | |
| cd08255 | 277 | 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_ | 99.96 | |
| PF00107 | 130 | ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: | 99.79 | |
| PF08240 | 109 | ADH_N: Alcohol dehydrogenase GroES-like domain; In | 99.7 | |
| PF13602 | 127 | ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQ | 99.57 | |
| cd00401 | 413 | AdoHcyase S-adenosyl-L-homocysteine hydrolase (Ado | 99.33 | |
| PRK09424 | 509 | pntA NAD(P) transhydrogenase subunit alpha; Provis | 99.33 | |
| PF11017 | 314 | DUF2855: Protein of unknown function (DUF2855); In | 98.76 | |
| TIGR00561 | 511 | pntA NAD(P) transhydrogenase, alpha subunit. In so | 98.51 | |
| COG4221 | 246 | Short-chain alcohol dehydrogenase of unknown speci | 98.42 | |
| PRK11873 | 272 | arsM arsenite S-adenosylmethyltransferase; Reviewe | 98.37 | |
| PRK05476 | 425 | S-adenosyl-L-homocysteine hydrolase; Provisional | 98.33 | |
| COG3967 | 245 | DltE Short-chain dehydrogenase involved in D-alani | 98.29 | |
| COG0300 | 265 | DltE Short-chain dehydrogenases of various substra | 98.25 | |
| TIGR00936 | 406 | ahcY adenosylhomocysteinase. This enzyme hydrolyze | 98.24 | |
| PRK08324 | 681 | short chain dehydrogenase; Validated | 98.22 | |
| PLN02494 | 477 | adenosylhomocysteinase | 98.19 | |
| PRK08306 | 296 | dipicolinate synthase subunit A; Reviewed | 98.17 | |
| PRK05786 | 238 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 98.08 | |
| PRK05693 | 274 | short chain dehydrogenase; Provisional | 98.07 | |
| PRK05993 | 277 | short chain dehydrogenase; Provisional | 98.05 | |
| TIGR00518 | 370 | alaDH alanine dehydrogenase. The family of known L | 98.01 | |
| PRK06182 | 273 | short chain dehydrogenase; Validated | 98.0 | |
| PRK12742 | 237 | oxidoreductase; Provisional | 98.0 | |
| PRK00517 | 250 | prmA ribosomal protein L11 methyltransferase; Revi | 97.96 | |
| cd05213 | 311 | NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain | 97.95 | |
| PRK08265 | 261 | short chain dehydrogenase; Provisional | 97.9 | |
| PF01488 | 135 | Shikimate_DH: Shikimate / quinate 5-dehydrogenase; | 97.88 | |
| KOG1205 | 282 | consensus Predicted dehydrogenase [Secondary metab | 97.86 | |
| KOG1209 | 289 | consensus 1-Acyl dihydroxyacetone phosphate reduct | 97.83 | |
| PRK07825 | 273 | short chain dehydrogenase; Provisional | 97.82 | |
| PTZ00075 | 476 | Adenosylhomocysteinase; Provisional | 97.8 | |
| PRK07576 | 264 | short chain dehydrogenase; Provisional | 97.78 | |
| PRK08339 | 263 | short chain dehydrogenase; Provisional | 97.77 | |
| PRK07109 | 334 | short chain dehydrogenase; Provisional | 97.76 | |
| PRK05872 | 296 | short chain dehydrogenase; Provisional | 97.74 | |
| COG2518 | 209 | Pcm Protein-L-isoaspartate carboxylmethyltransfera | 97.73 | |
| PRK06500 | 249 | short chain dehydrogenase; Provisional | 97.72 | |
| PLN03209 | 576 | translocon at the inner envelope of chloroplast su | 97.72 | |
| PRK06198 | 260 | short chain dehydrogenase; Provisional | 97.7 | |
| PRK12829 | 264 | short chain dehydrogenase; Provisional | 97.69 | |
| TIGR02853 | 287 | spore_dpaA dipicolinic acid synthetase, A subunit. | 97.69 | |
| PF13460 | 183 | NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X | 97.68 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.67 | |
| PLN02780 | 320 | ketoreductase/ oxidoreductase | 97.66 | |
| PRK12771 | 564 | putative glutamate synthase (NADPH) small subunit; | 97.65 | |
| PRK07326 | 237 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK06200 | 263 | 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrog | 97.64 | |
| PRK06057 | 255 | short chain dehydrogenase; Provisional | 97.64 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.63 | |
| PRK06139 | 330 | short chain dehydrogenase; Provisional | 97.63 | |
| PRK09186 | 256 | flagellin modification protein A; Provisional | 97.62 | |
| PRK07806 | 248 | short chain dehydrogenase; Provisional | 97.61 | |
| PRK07231 | 251 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.61 | |
| PRK12939 | 250 | short chain dehydrogenase; Provisional | 97.61 | |
| PRK07060 | 245 | short chain dehydrogenase; Provisional | 97.6 | |
| PRK06484 | 520 | short chain dehydrogenase; Validated | 97.6 | |
| PRK08415 | 274 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.59 | |
| TIGR03325 | 262 | BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydro | 97.58 | |
| PRK08017 | 256 | oxidoreductase; Provisional | 97.58 | |
| PRK12828 | 239 | short chain dehydrogenase; Provisional | 97.57 | |
| PRK08267 | 260 | short chain dehydrogenase; Provisional | 97.56 | |
| PRK10538 | 248 | malonic semialdehyde reductase; Provisional | 97.53 | |
| PRK00045 | 423 | hemA glutamyl-tRNA reductase; Reviewed | 97.51 | |
| PRK07062 | 265 | short chain dehydrogenase; Provisional | 97.49 | |
| PF12847 | 112 | Methyltransf_18: Methyltransferase domain; PDB: 3G | 97.49 | |
| PRK12823 | 260 | benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylat | 97.48 | |
| PRK06196 | 315 | oxidoreductase; Provisional | 97.48 | |
| PRK08177 | 225 | short chain dehydrogenase; Provisional | 97.48 | |
| PRK05866 | 293 | short chain dehydrogenase; Provisional | 97.47 | |
| PRK08263 | 275 | short chain dehydrogenase; Provisional | 97.46 | |
| PRK07832 | 272 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK06949 | 258 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK07063 | 260 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK07814 | 263 | short chain dehydrogenase; Provisional | 97.45 | |
| PRK05854 | 313 | short chain dehydrogenase; Provisional | 97.43 | |
| PRK09072 | 263 | short chain dehydrogenase; Provisional | 97.43 | |
| PRK06914 | 280 | short chain dehydrogenase; Provisional | 97.42 | |
| PRK05884 | 223 | short chain dehydrogenase; Provisional | 97.42 | |
| PRK08261 | 450 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.42 | |
| PRK05867 | 253 | short chain dehydrogenase; Provisional | 97.42 | |
| PRK07831 | 262 | short chain dehydrogenase; Provisional | 97.41 | |
| PRK12429 | 258 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.41 | |
| PRK06128 | 300 | oxidoreductase; Provisional | 97.41 | |
| PRK06180 | 277 | short chain dehydrogenase; Provisional | 97.4 | |
| PRK05653 | 246 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.39 | |
| PRK06181 | 263 | short chain dehydrogenase; Provisional | 97.39 | |
| KOG1014 | 312 | consensus 17 beta-hydroxysteroid dehydrogenase typ | 97.39 | |
| PRK07478 | 254 | short chain dehydrogenase; Provisional | 97.38 | |
| PRK06101 | 240 | short chain dehydrogenase; Provisional | 97.37 | |
| PRK05717 | 255 | oxidoreductase; Validated | 97.37 | |
| PRK07904 | 253 | short chain dehydrogenase; Provisional | 97.36 | |
| PRK06841 | 255 | short chain dehydrogenase; Provisional | 97.36 | |
| cd01078 | 194 | NAD_bind_H4MPT_DH NADP binding domain of methylene | 97.36 | |
| PRK07890 | 258 | short chain dehydrogenase; Provisional | 97.35 | |
| PRK07533 | 258 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.35 | |
| KOG0725 | 270 | consensus Reductases with broad range of substrate | 97.34 | |
| PF02826 | 178 | 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehy | 97.34 | |
| PRK07453 | 322 | protochlorophyllide oxidoreductase; Validated | 97.34 | |
| COG4122 | 219 | Predicted O-methyltransferase [General function pr | 97.34 | |
| PRK06194 | 287 | hypothetical protein; Provisional | 97.32 | |
| PRK05876 | 275 | short chain dehydrogenase; Provisional | 97.32 | |
| PRK09291 | 257 | short chain dehydrogenase; Provisional | 97.31 | |
| PRK08340 | 259 | glucose-1-dehydrogenase; Provisional | 97.3 | |
| PRK07024 | 257 | short chain dehydrogenase; Provisional | 97.3 | |
| PRK07523 | 255 | gluconate 5-dehydrogenase; Provisional | 97.3 | |
| COG1748 | 389 | LYS9 Saccharopine dehydrogenase and related protei | 97.28 | |
| PRK11705 | 383 | cyclopropane fatty acyl phospholipid synthase; Pro | 97.27 | |
| PRK13394 | 262 | 3-hydroxybutyrate dehydrogenase; Provisional | 97.27 | |
| COG2242 | 187 | CobL Precorrin-6B methylase 2 [Coenzyme metabolism | 97.27 | |
| PRK08703 | 239 | short chain dehydrogenase; Provisional | 97.26 | |
| PRK00377 | 198 | cbiT cobalt-precorrin-6Y C(15)-methyltransferase; | 97.25 | |
| PLN02253 | 280 | xanthoxin dehydrogenase | 97.25 | |
| PRK06179 | 270 | short chain dehydrogenase; Provisional | 97.25 | |
| PRK07677 | 252 | short chain dehydrogenase; Provisional | 97.23 | |
| TIGR01832 | 248 | kduD 2-deoxy-D-gluconate 3-dehydrogenase. This mod | 97.23 | |
| PRK06197 | 306 | short chain dehydrogenase; Provisional | 97.23 | |
| PRK08589 | 272 | short chain dehydrogenase; Validated | 97.23 | |
| PRK08217 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.22 | |
| KOG1210 | 331 | consensus Predicted 3-ketosphinganine reductase [S | 97.22 | |
| PRK08862 | 227 | short chain dehydrogenase; Provisional | 97.21 | |
| PRK06483 | 236 | dihydromonapterin reductase; Provisional | 97.21 | |
| PRK06953 | 222 | short chain dehydrogenase; Provisional | 97.21 | |
| PRK07774 | 250 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK07067 | 257 | sorbitol dehydrogenase; Provisional | 97.2 | |
| PRK06482 | 276 | short chain dehydrogenase; Provisional | 97.2 | |
| PRK08594 | 257 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.2 | |
| PRK08251 | 248 | short chain dehydrogenase; Provisional | 97.19 | |
| PRK09242 | 257 | tropinone reductase; Provisional | 97.19 | |
| PRK07985 | 294 | oxidoreductase; Provisional | 97.18 | |
| PRK07035 | 252 | short chain dehydrogenase; Provisional | 97.18 | |
| PRK08643 | 256 | acetoin reductase; Validated | 97.17 | |
| PF02353 | 273 | CMAS: Mycolic acid cyclopropane synthetase; InterP | 97.16 | |
| PRK12937 | 245 | short chain dehydrogenase; Provisional | 97.16 | |
| PRK07370 | 258 | enoyl-(acyl carrier protein) reductase; Validated | 97.15 | |
| PRK06505 | 271 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.15 | |
| TIGR00406 | 288 | prmA ribosomal protein L11 methyltransferase. Ribo | 97.14 | |
| PRK08213 | 259 | gluconate 5-dehydrogenase; Provisional | 97.14 | |
| PRK05875 | 276 | short chain dehydrogenase; Provisional | 97.13 | |
| PRK06079 | 252 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.12 | |
| PRK06720 | 169 | hypothetical protein; Provisional | 97.11 | |
| PRK06172 | 253 | short chain dehydrogenase; Provisional | 97.11 | |
| PRK08063 | 250 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.11 | |
| CHL00194 | 317 | ycf39 Ycf39; Provisional | 97.11 | |
| PLN00141 | 251 | Tic62-NAD(P)-related group II protein; Provisional | 97.11 | |
| PRK07666 | 239 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.1 | |
| PRK06138 | 252 | short chain dehydrogenase; Provisional | 97.1 | |
| PRK12367 | 245 | short chain dehydrogenase; Provisional | 97.09 | |
| PRK12481 | 251 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 97.09 | |
| PRK07454 | 241 | short chain dehydrogenase; Provisional | 97.09 | |
| PRK08159 | 272 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.09 | |
| PRK08085 | 254 | gluconate 5-dehydrogenase; Provisional | 97.08 | |
| PRK07069 | 251 | short chain dehydrogenase; Validated | 97.08 | |
| KOG1201 | 300 | consensus Hydroxysteroid 17-beta dehydrogenase 11 | 97.08 | |
| PRK08628 | 258 | short chain dehydrogenase; Provisional | 97.07 | |
| KOG1208 | 314 | consensus Dehydrogenases with different specificit | 97.07 | |
| PRK06125 | 259 | short chain dehydrogenase; Provisional | 97.06 | |
| PRK12938 | 246 | acetyacetyl-CoA reductase; Provisional | 97.06 | |
| PRK12747 | 252 | short chain dehydrogenase; Provisional | 97.05 | |
| PRK06603 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 97.05 | |
| PLN02730 | 303 | enoyl-[acyl-carrier-protein] reductase | 97.05 | |
| PRK13943 | 322 | protein-L-isoaspartate O-methyltransferase; Provis | 97.05 | |
| PRK05557 | 248 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 97.04 | |
| PRK08277 | 278 | D-mannonate oxidoreductase; Provisional | 97.04 | |
| PF02670 | 129 | DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate re | 97.04 | |
| TIGR01289 | 314 | LPOR light-dependent protochlorophyllide reductase | 97.04 | |
| PRK12936 | 245 | 3-ketoacyl-(acyl-carrier-protein) reductase NodG; | 97.02 | |
| PRK07424 | 406 | bifunctional sterol desaturase/short chain dehydro | 97.02 | |
| PRK05447 | 385 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; P | 97.01 | |
| PRK06114 | 254 | short chain dehydrogenase; Provisional | 97.01 | |
| PRK07074 | 257 | short chain dehydrogenase; Provisional | 97.0 | |
| PF01135 | 209 | PCMT: Protein-L-isoaspartate(D-aspartate) O-methyl | 97.0 | |
| PRK06077 | 252 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.99 | |
| PRK06701 | 290 | short chain dehydrogenase; Provisional | 96.97 | |
| PRK07856 | 252 | short chain dehydrogenase; Provisional | 96.97 | |
| PRK06463 | 255 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.97 | |
| PRK08226 | 263 | short chain dehydrogenase; Provisional | 96.96 | |
| PRK07889 | 256 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.96 | |
| PRK05565 | 247 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.95 | |
| PRK06935 | 258 | 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | 96.94 | |
| PRK07791 | 286 | short chain dehydrogenase; Provisional | 96.93 | |
| PRK12746 | 254 | short chain dehydrogenase; Provisional | 96.92 | |
| PRK08416 | 260 | 7-alpha-hydroxysteroid dehydrogenase; Provisional | 96.92 | |
| PRK12826 | 251 | 3-ketoacyl-(acyl-carrier-protein) reductase; Revie | 96.92 | |
| PRK06124 | 256 | gluconate 5-dehydrogenase; Provisional | 96.92 | |
| PRK04148 | 134 | hypothetical protein; Provisional | 96.91 | |
| PRK06398 | 258 | aldose dehydrogenase; Validated | 96.91 | |
| PRK06113 | 255 | 7-alpha-hydroxysteroid dehydrogenase; Validated | 96.9 | |
| PRK08219 | 227 | short chain dehydrogenase; Provisional | 96.89 | |
| PRK08690 | 261 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.89 | |
| PRK06940 | 275 | short chain dehydrogenase; Provisional | 96.88 | |
| TIGR02622 | 349 | CDP_4_6_dhtase CDP-glucose 4,6-dehydratase. Member | 96.85 | |
| COG2230 | 283 | Cfa Cyclopropane fatty acid synthase and related m | 96.85 | |
| TIGR00438 | 188 | rrmJ cell division protein FtsJ. | 96.85 | |
| PRK05650 | 270 | short chain dehydrogenase; Provisional | 96.85 | |
| PRK13942 | 212 | protein-L-isoaspartate O-methyltransferase; Provis | 96.85 | |
| PF01596 | 205 | Methyltransf_3: O-methyltransferase; InterPro: IPR | 96.84 | |
| PLN02657 | 390 | 3,8-divinyl protochlorophyllide a 8-vinyl reductas | 96.83 | |
| PF00106 | 167 | adh_short: short chain dehydrogenase alcohol dehyd | 96.83 | |
| PRK07097 | 265 | gluconate 5-dehydrogenase; Provisional | 96.83 | |
| PRK08993 | 253 | 2-deoxy-D-gluconate 3-dehydrogenase; Validated | 96.82 | |
| PRK07577 | 234 | short chain dehydrogenase; Provisional | 96.82 | |
| TIGR03206 | 250 | benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydr | 96.81 | |
| PRK08220 | 252 | 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | 96.8 | |
| PRK05599 | 246 | hypothetical protein; Provisional | 96.79 | |
| PRK08303 | 305 | short chain dehydrogenase; Provisional | 96.79 | |
| PRK12384 | 259 | sorbitol-6-phosphate dehydrogenase; Provisional | 96.78 | |
| PRK07984 | 262 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.77 | |
| PRK12743 | 256 | oxidoreductase; Provisional | 96.77 | |
| PRK13944 | 205 | protein-L-isoaspartate O-methyltransferase; Provis | 96.77 | |
| PRK08278 | 273 | short chain dehydrogenase; Provisional | 96.77 | |
| PF00670 | 162 | AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase | 96.75 | |
| PRK08309 | 177 | short chain dehydrogenase; Provisional | 96.75 | |
| PRK06997 | 260 | enoyl-(acyl carrier protein) reductase; Provisiona | 96.74 | |
| KOG1252 | 362 | consensus Cystathionine beta-synthase and related | 96.74 | |
| PRK08945 | 247 | putative oxoacyl-(acyl carrier protein) reductase; | 96.74 | |
| PF13561 | 241 | adh_short_C2: Enoyl-(Acyl carrier protein) reducta | 96.73 | |
| PRK07023 | 243 | short chain dehydrogenase; Provisional | 96.72 | |
| TIGR01829 | 242 | AcAcCoA_reduct acetoacetyl-CoA reductase. (R)-3-hy | 96.7 | |
| PRK06523 | 260 | short chain dehydrogenase; Provisional | 96.66 | |
| PRK13940 | 414 | glutamyl-tRNA reductase; Provisional | 96.66 | |
| PRK07102 | 243 | short chain dehydrogenase; Provisional | 96.65 | |
| TIGR01035 | 417 | hemA glutamyl-tRNA reductase. This enzyme, togethe | 96.65 | |
| PLN02476 | 278 | O-methyltransferase | 96.65 | |
| PRK07775 | 274 | short chain dehydrogenase; Provisional | 96.64 | |
| PRK09135 | 249 | pteridine reductase; Provisional | 96.64 | |
| PRK05855 | 582 | short chain dehydrogenase; Validated | 96.62 | |
| PLN00015 | 308 | protochlorophyllide reductase | 96.62 | |
| KOG1610 | 322 | consensus Corticosteroid 11-beta-dehydrogenase and | 96.61 | |
| TIGR02632 | 676 | RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alc | 96.61 | |
| COG0686 | 371 | Ald Alanine dehydrogenase [Amino acid transport an | 96.6 | |
| TIGR01963 | 255 | PHB_DH 3-hydroxybutyrate dehydrogenase. This model | 96.6 | |
| PRK08264 | 238 | short chain dehydrogenase; Validated | 96.6 | |
| PF03435 | 386 | Saccharop_dh: Saccharopine dehydrogenase ; InterPr | 96.59 | |
| PLN02781 | 234 | Probable caffeoyl-CoA O-methyltransferase | 96.57 | |
| PRK09134 | 258 | short chain dehydrogenase; Provisional | 96.56 | |
| COG2910 | 211 | Putative NADH-flavin reductase [General function p | 96.56 | |
| PLN00016 | 378 | RNA-binding protein; Provisional | 96.54 | |
| COG2519 | 256 | GCD14 tRNA(1-methyladenosine) methyltransferase an | 96.54 | |
| PRK08642 | 253 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.54 | |
| PRK07201 | 657 | short chain dehydrogenase; Provisional | 96.54 | |
| COG2226 | 238 | UbiE Methylase involved in ubiquinone/menaquinone | 96.54 | |
| PRK06171 | 266 | sorbitol-6-phosphate 2-dehydrogenase; Provisional | 96.52 | |
| TIGR02415 | 254 | 23BDH acetoin reductases. One member of this famil | 96.52 | |
| PRK03369 | 488 | murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate syn | 96.51 | |
| PRK00258 | 278 | aroE shikimate 5-dehydrogenase; Reviewed | 96.5 | |
| PF02719 | 293 | Polysacc_synt_2: Polysaccharide biosynthesis prote | 96.48 | |
| PRK00107 | 187 | gidB 16S rRNA methyltransferase GidB; Reviewed | 96.48 | |
| PLN02589 | 247 | caffeoyl-CoA O-methyltransferase | 96.47 | |
| TIGR00080 | 215 | pimt protein-L-isoaspartate(D-aspartate) O-methylt | 96.45 | |
| PRK07402 | 196 | precorrin-6B methylase; Provisional | 96.42 | |
| PRK08936 | 261 | glucose-1-dehydrogenase; Provisional | 96.42 | |
| KOG1200 | 256 | consensus Mitochondrial/plastidial beta-ketoacyl-A | 96.41 | |
| PRK12745 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 96.4 | |
| PF03807 | 96 | F420_oxidored: NADP oxidoreductase coenzyme F420-d | 96.39 | |
| COG0169 | 283 | AroE Shikimate 5-dehydrogenase [Amino acid transpo | 96.36 | |
| TIGR02685 | 267 | pter_reduc_Leis pteridine reductase. Pteridine red | 96.34 | |
| PRK00811 | 283 | spermidine synthase; Provisional | 96.33 | |
| PRK07578 | 199 | short chain dehydrogenase; Provisional | 96.3 | |
| TIGR02469 | 124 | CbiT precorrin-6Y C5,15-methyltransferase (decarbo | 96.3 | |
| COG0031 | 300 | CysK Cysteine synthase [Amino acid transport and m | 96.28 | |
| PF06325 | 295 | PrmA: Ribosomal protein L11 methyltransferase (Prm | 96.26 | |
| TIGR03589 | 324 | PseB UDP-N-acetylglucosamine 4,6-dehydratase. This | 96.24 | |
| TIGR00507 | 270 | aroE shikimate 5-dehydrogenase. This model finds p | 96.23 | |
| PRK12825 | 249 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.23 | |
| cd01065 | 155 | NAD_bind_Shikimate_DH NAD(P) binding domain of Shi | 96.23 | |
| PLN02366 | 308 | spermidine synthase | 96.22 | |
| TIGR03649 | 285 | ergot_EASG ergot alkaloid biosynthesis protein, AF | 96.22 | |
| PRK07041 | 230 | short chain dehydrogenase; Provisional | 96.19 | |
| TIGR01809 | 282 | Shik-DH-AROM shikimate-5-dehydrogenase, fungal ARO | 96.17 | |
| PRK12935 | 247 | acetoacetyl-CoA reductase; Provisional | 96.17 | |
| PF01262 | 168 | AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal | 96.15 | |
| PRK12548 | 289 | shikimate 5-dehydrogenase; Provisional | 96.15 | |
| cd01080 | 168 | NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of | 96.14 | |
| PRK14027 | 283 | quinate/shikimate dehydrogenase; Provisional | 96.14 | |
| PRK07792 | 306 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 96.13 | |
| PRK12744 | 257 | short chain dehydrogenase; Provisional | 96.12 | |
| PTZ00098 | 263 | phosphoethanolamine N-methyltransferase; Provision | 96.12 | |
| TIGR01470 | 205 | cysG_Nterm siroheme synthase, N-terminal domain. T | 96.11 | |
| PRK12549 | 284 | shikimate 5-dehydrogenase; Reviewed | 96.1 | |
| PRK06947 | 248 | glucose-1-dehydrogenase; Provisional | 96.1 | |
| PRK12550 | 272 | shikimate 5-dehydrogenase; Reviewed | 96.07 | |
| PRK07066 | 321 | 3-hydroxybutyryl-CoA dehydrogenase; Validated | 96.06 | |
| PF05368 | 233 | NmrA: NmrA-like family; InterPro: IPR008030 NmrA i | 96.04 | |
| COG2227 | 243 | UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4- | 96.04 | |
| PRK14175 | 286 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 96.01 | |
| PLN02986 | 322 | cinnamyl-alcohol dehydrogenase family protein | 96.0 | |
| PRK09730 | 247 | putative NAD(P)-binding oxidoreductase; Provisiona | 95.99 | |
| PRK14982 | 340 | acyl-ACP reductase; Provisional | 95.98 | |
| PLN02896 | 353 | cinnamyl-alcohol dehydrogenase | 95.98 | |
| PRK06123 | 248 | short chain dehydrogenase; Provisional | 95.96 | |
| PRK06300 | 299 | enoyl-(acyl carrier protein) reductase; Provisiona | 95.95 | |
| PF01370 | 236 | Epimerase: NAD dependent epimerase/dehydratase fam | 95.94 | |
| PLN02989 | 325 | cinnamyl-alcohol dehydrogenase family protein | 95.93 | |
| TIGR01500 | 256 | sepiapter_red sepiapterin reductase. This model de | 95.93 | |
| PLN02653 | 340 | GDP-mannose 4,6-dehydratase | 95.87 | |
| cd01075 | 200 | NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of l | 95.87 | |
| PRK12824 | 245 | acetoacetyl-CoA reductase; Provisional | 95.85 | |
| PRK11207 | 197 | tellurite resistance protein TehB; Provisional | 95.84 | |
| PLN03075 | 296 | nicotianamine synthase; Provisional | 95.84 | |
| KOG1207 | 245 | consensus Diacetyl reductase/L-xylulose reductase | 95.83 | |
| KOG1199 | 260 | consensus Short-chain alcohol dehydrogenase/3-hydr | 95.83 | |
| PF13241 | 103 | NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_ | 95.83 | |
| PRK13656 | 398 | trans-2-enoyl-CoA reductase; Provisional | 95.83 | |
| PRK12827 | 249 | short chain dehydrogenase; Provisional | 95.8 | |
| COG0373 | 414 | HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | 95.78 | |
| PRK06718 | 202 | precorrin-2 dehydrogenase; Reviewed | 95.78 | |
| PF08704 | 247 | GCD14: tRNA methyltransferase complex GCD14 subuni | 95.77 | |
| PRK12859 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 95.72 | |
| PRK01581 | 374 | speE spermidine synthase; Validated | 95.72 | |
| PRK07502 | 307 | cyclohexadienyl dehydrogenase; Validated | 95.71 | |
| PLN02240 | 352 | UDP-glucose 4-epimerase | 95.7 | |
| PRK04457 | 262 | spermidine synthase; Provisional | 95.7 | |
| PLN02686 | 367 | cinnamoyl-CoA reductase | 95.7 | |
| TIGR01472 | 343 | gmd GDP-mannose 4,6-dehydratase. Excluded from thi | 95.7 | |
| PRK06550 | 235 | fabG 3-ketoacyl-(acyl-carrier-protein) reductase; | 95.67 | |
| PLN02695 | 370 | GDP-D-mannose-3',5'-epimerase | 95.67 | |
| PRK06719 | 157 | precorrin-2 dehydrogenase; Validated | 95.64 | |
| COG1086 | 588 | Predicted nucleoside-diphosphate sugar epimerases | 95.63 | |
| PLN02244 | 340 | tocopherol O-methyltransferase | 95.62 | |
| COG1028 | 251 | FabG Dehydrogenases with different specificities ( | 95.62 | |
| COG1090 | 297 | Predicted nucleoside-diphosphate sugar epimerase [ | 95.58 | |
| PRK12748 | 256 | 3-ketoacyl-(acyl-carrier-protein) reductase; Provi | 95.57 | |
| TIGR02356 | 202 | adenyl_thiF thiazole biosynthesis adenylyltransfer | 95.57 | |
| KOG4169 | 261 | consensus 15-hydroxyprostaglandin dehydrogenase an | 95.57 | |
| PRK14189 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.55 | |
| PLN02214 | 342 | cinnamoyl-CoA reductase | 95.54 | |
| PRK10675 | 338 | UDP-galactose-4-epimerase; Provisional | 95.51 | |
| PRK12749 | 288 | quinate/shikimate dehydrogenase; Reviewed | 95.49 | |
| TIGR03466 | 328 | HpnA hopanoid-associated sugar epimerase. The sequ | 95.47 | |
| PRK11036 | 255 | putative S-adenosyl-L-methionine-dependent methylt | 95.46 | |
| PRK06924 | 251 | short chain dehydrogenase; Provisional | 95.46 | |
| TIGR00715 | 256 | precor6x_red precorrin-6x reductase. This enzyme w | 95.45 | |
| PF02737 | 180 | 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD bind | 95.44 | |
| TIGR01830 | 239 | 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) re | 95.36 | |
| cd05311 | 226 | NAD_bind_2_malic_enz NAD(P) binding domain of mali | 95.35 | |
| PRK00312 | 212 | pcm protein-L-isoaspartate O-methyltransferase; Re | 95.34 | |
| TIGR03840 | 213 | TMPT_Se_Te thiopurine S-methyltransferase, Se/Te d | 95.32 | |
| PRK13243 | 333 | glyoxylate reductase; Reviewed | 95.32 | |
| KOG4022 | 236 | consensus Dihydropteridine reductase DHPR/QDPR [Am | 95.31 | |
| PRK08618 | 325 | ornithine cyclodeaminase; Validated | 95.31 | |
| PF10727 | 127 | Rossmann-like: Rossmann-like domain; InterPro: IPR | 95.31 | |
| TIGR01831 | 239 | fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductas | 95.29 | |
| COG2264 | 300 | PrmA Ribosomal protein L11 methylase [Translation, | 95.28 | |
| PRK06849 | 389 | hypothetical protein; Provisional | 95.28 | |
| PLN00203 | 519 | glutamyl-tRNA reductase | 95.23 | |
| PRK07574 | 385 | formate dehydrogenase; Provisional | 95.22 | |
| PLN02427 | 386 | UDP-apiose/xylose synthase | 95.18 | |
| COG1052 | 324 | LdhA Lactate dehydrogenase and related dehydrogena | 95.16 | |
| TIGR02197 | 314 | heptose_epim ADP-L-glycero-D-manno-heptose-6-epime | 95.15 | |
| COG1179 | 263 | Dinucleotide-utilizing enzymes involved in molybdo | 95.14 | |
| PLN00198 | 338 | anthocyanidin reductase; Provisional | 95.13 | |
| PLN02662 | 322 | cinnamyl-alcohol dehydrogenase family protein | 95.12 | |
| PRK00536 | 262 | speE spermidine synthase; Provisional | 95.12 | |
| PRK08655 | 437 | prephenate dehydrogenase; Provisional | 95.12 | |
| PF01118 | 121 | Semialdhyde_dh: Semialdehyde dehydrogenase, NAD bi | 95.11 | |
| PRK14191 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 95.1 | |
| PLN02696 | 454 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase | 95.09 | |
| PRK11908 | 347 | NAD-dependent epimerase/dehydratase family protein | 95.02 | |
| PLN02650 | 351 | dihydroflavonol-4-reductase | 95.01 | |
| TIGR01777 | 292 | yfcH conserved hypothetical protein TIGR01777. Thi | 94.99 | |
| PRK08762 | 376 | molybdopterin biosynthesis protein MoeB; Validated | 94.99 | |
| COG3288 | 356 | PntA NAD/NADP transhydrogenase alpha subunit [Ener | 94.98 | |
| PRK08317 | 241 | hypothetical protein; Provisional | 94.98 | |
| PRK14192 | 283 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.97 | |
| PRK08287 | 187 | cobalt-precorrin-6Y C(15)-methyltransferase; Valid | 94.94 | |
| PRK08125 | 660 | bifunctional UDP-glucuronic acid decarboxylase/UDP | 94.94 | |
| PLN03013 | 429 | cysteine synthase | 94.91 | |
| TIGR00477 | 195 | tehB tellurite resistance protein TehB. Part of a | 94.9 | |
| TIGR01181 | 317 | dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase. This | 94.9 | |
| PF07991 | 165 | IlvN: Acetohydroxy acid isomeroreductase, catalyti | 94.9 | |
| PRK10792 | 285 | bifunctional 5,10-methylene-tetrahydrofolate dehyd | 94.89 | |
| PLN03139 | 386 | formate dehydrogenase; Provisional | 94.87 | |
| PRK05579 | 399 | bifunctional phosphopantothenoylcysteine decarboxy | 94.87 | |
| PRK13255 | 218 | thiopurine S-methyltransferase; Reviewed | 94.8 | |
| KOG1502 | 327 | consensus Flavonol reductase/cinnamoyl-CoA reducta | 94.8 |
| >COG1064 AdhP Zn-dependent alcohol dehydrogenases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-56 Score=386.74 Aligned_cols=306 Identities=25% Similarity=0.314 Sum_probs=275.1
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
+++|||+++.++ ++| +++.+.+.| .++++||+|||+|+|+|++|++.+.|.++...+|++||||+.| +|
T Consensus 1 ~~~mkA~~~~~~--~~p----l~i~e~~~p---~p~~~eVlI~v~~~GVChsDlH~~~G~~~~~~~P~ipGHEivG--~V 69 (339)
T COG1064 1 MMTMKAAVLKKF--GQP----LEIEEVPVP---EPGPGEVLIKVEACGVCHTDLHVAKGDWPVPKLPLIPGHEIVG--TV 69 (339)
T ss_pred CcceEEEEEccC--CCC----ceEEeccCC---CCCCCeEEEEEEEEeecchhhhhhcCCCCCCCCCccCCcceEE--EE
Confidence 468899999999 887 577765554 5699999999999999999999999999888899999999665 99
Q ss_pred EEecCCCCCCCCCCEEEe-c------------------------------cccceeEeecCCcceeecCCCCCccchhhc
Q 019332 84 KVLDSENPEFKKGDLVWG-M------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGI 132 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~-~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~ 132 (342)
++||++|++||+||||.. + |+|+||+++++.+++++ |++++.. ++|.
T Consensus 70 ~~vG~~V~~~k~GDrVgV~~~~~~Cg~C~~C~~G~E~~C~~~~~~gy~~~GGyaeyv~v~~~~~~~i-P~~~d~~-~aAp 147 (339)
T COG1064 70 VEVGEGVTGLKVGDRVGVGWLVISCGECEYCRSGNENLCPNQKITGYTTDGGYAEYVVVPARYVVKI-PEGLDLA-EAAP 147 (339)
T ss_pred EEecCCCccCCCCCEEEecCccCCCCCCccccCcccccCCCccccceeecCcceeEEEEchHHeEEC-CCCCChh-hhhh
Confidence 999999999999999975 2 79999999999999999 9995544 3899
Q ss_pred cCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 133 l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
+.|++.|+|++|.+ .+++||++|+|+|+ ||+|.+++|+|+++|++|++++++++|.++++ ++|++++++.++. +..
T Consensus 148 llCaGiT~y~alk~-~~~~pG~~V~I~G~-GGlGh~avQ~Aka~ga~Via~~~~~~K~e~a~-~lGAd~~i~~~~~-~~~ 223 (339)
T COG1064 148 LLCAGITTYRALKK-ANVKPGKWVAVVGA-GGLGHMAVQYAKAMGAEVIAITRSEEKLELAK-KLGADHVINSSDS-DAL 223 (339)
T ss_pred hhcCeeeEeeehhh-cCCCCCCEEEEECC-cHHHHHHHHHHHHcCCeEEEEeCChHHHHHHH-HhCCcEEEEcCCc-hhh
Confidence 99999999999954 99999999999998 79999999999999999999999999999999 9999999998865 777
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceec-cccCCCCccccchHHHHhcceeeecceecccccchH
Q 019332 213 EALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS-QYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP 291 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
+.+++. +|++||+++...++.++++|+++|+++++|.+. .. ....+...++.+++++.|+.... +
T Consensus 224 ~~~~~~----~d~ii~tv~~~~~~~~l~~l~~~G~~v~vG~~~~~~-----~~~~~~~~li~~~~~i~GS~~g~-----~ 289 (339)
T COG1064 224 EAVKEI----ADAIIDTVGPATLEPSLKALRRGGTLVLVGLPGGGP-----IPLLPAFLLILKEISIVGSLVGT-----R 289 (339)
T ss_pred HHhHhh----CcEEEECCChhhHHHHHHHHhcCCEEEEECCCCCcc-----cCCCCHHHhhhcCeEEEEEecCC-----H
Confidence 777764 999999999889999999999999999999874 21 23356677888999999998888 8
Q ss_pred HHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 292 KFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 292 ~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.++++++++..++.+++.+...++++++++|++.|.+++..|++||.+.
T Consensus 290 ~d~~e~l~f~~~g~Ikp~i~e~~~l~~in~A~~~m~~g~v~gR~Vi~~~ 338 (339)
T COG1064 290 ADLEEALDFAAEGKIKPEILETIPLDEINEAYERMEKGKVRGRAVIDMS 338 (339)
T ss_pred HHHHHHHHHHHhCCceeeEEeeECHHHHHHHHHHHHcCCeeeEEEecCC
Confidence 8899999999999999999877899999999999999999999999864
|
|
| >COG0604 Qor NADPH:quinone reductase and related Zn-dependent oxidoreductases [Energy production and conversion / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-54 Score=378.45 Aligned_cols=316 Identities=28% Similarity=0.429 Sum_probs=270.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccC-CCCccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI-KGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~-~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ |.|. . +...++|.|. ++++||||||+|+|+|+.|...+.|. .+...+|++||.|++| +|++
T Consensus 1 mka~~~~~~--g~~~--~--l~~~e~~~P~-p~~geVlVrV~a~gvN~~D~~~r~G~~~~~~~~P~i~G~d~aG--~V~a 71 (326)
T COG0604 1 MKAVVVEEF--GGPE--V--LKVVEVPEPE-PGPGEVLVRVKAAGVNPIDVLVRQGLAPPVRPLPFIPGSEAAG--VVVA 71 (326)
T ss_pred CeEEEEecc--CCCc--e--eEEEecCCCC-CCCCeEEEEEEEeecChHHHHhccCCCCCCCCCCCcccceeEE--EEEE
Confidence 589999999 8885 2 4455577664 59999999999999999999999986 2445579999999776 9999
Q ss_pred ecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 86 LDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
+|++|+.|++||+|+++ |+|+||+.+|++.++++ |+++++. ++|++++.++|||++|....++++|++|||+
T Consensus 72 vG~~V~~~~~GdrV~~~~~~~~~G~~AEy~~v~a~~~~~~-P~~ls~~-eAAal~~~~~TA~~~l~~~~~l~~g~~VLV~ 149 (326)
T COG0604 72 VGSGVTGFKVGDRVAALGGVGRDGGYAEYVVVPADWLVPL-PDGLSFE-EAAALPLAGLTAWLALFDRAGLKPGETVLVH 149 (326)
T ss_pred eCCCCCCcCCCCEEEEccCCCCCCcceeEEEecHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 99999999999999987 68999999999999999 9994444 3999999999999999998999999999999
Q ss_pred cCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHH
Q 019332 160 AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAV 238 (342)
Q Consensus 160 ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~ 238 (342)
||+|++|.+++|+|+++|++++++++++++.++++ ++|++++++|++. ++.+++++++++ ++|+|||++|++.+..+
T Consensus 150 gaaGgVG~~aiQlAk~~G~~~v~~~~s~~k~~~~~-~lGAd~vi~y~~~-~~~~~v~~~t~g~gvDvv~D~vG~~~~~~~ 227 (326)
T COG0604 150 GAAGGVGSAAIQLAKALGATVVAVVSSSEKLELLK-ELGADHVINYREE-DFVEQVRELTGGKGVDVVLDTVGGDTFAAS 227 (326)
T ss_pred cCCchHHHHHHHHHHHcCCcEEEEecCHHHHHHHH-hcCCCEEEcCCcc-cHHHHHHHHcCCCCceEEEECCCHHHHHHH
Confidence 99999999999999999988777777888888888 9999999999998 899999999998 99999999999999999
Q ss_pred HHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeeccc
Q 019332 239 LLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE 317 (342)
Q Consensus 239 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~ 317 (342)
+++|+++|+++.+|..++ . .........++.+.+...+...... ++...+.++++.+++.+|.+++.+..+|||+
T Consensus 228 l~~l~~~G~lv~ig~~~g-~---~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l~ 303 (326)
T COG0604 228 LAALAPGGRLVSIGALSG-G---PPVPLNLLPLLGKRLTLRGVTLGSRDPEALAEALAELFDLLASGKLKPVIDRVYPLA 303 (326)
T ss_pred HHHhccCCEEEEEecCCC-C---CccccCHHHHhhccEEEEEecceecchHHHHHHHHHHHHHHHcCCCcceeccEechh
Confidence 999999999999999774 1 1223346667777888877766532 2455678889999999999999999999999
Q ss_pred cHHHHHHHHHc-CCccceEEEEe
Q 019332 318 SAPATLIGLFS-GRNVGKQVVAV 339 (342)
Q Consensus 318 ~~~~a~~~~~~-~~~~gkvvv~~ 339 (342)
+..++...... ++..||+|+++
T Consensus 304 e~~~a~a~~~~~~~~~GKvvl~~ 326 (326)
T COG0604 304 EAPAAAAHLLLERRTTGKVVLKV 326 (326)
T ss_pred hhHHHHHHHHcccCCcceEEEeC
Confidence 95554444443 58899999974
|
|
| >KOG1197 consensus Predicted quinone oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-53 Score=342.52 Aligned_cols=321 Identities=21% Similarity=0.301 Sum_probs=281.1
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|+..|-+++++. |++ +.+++++.++| +++|+|++||..|+|+|..|...+.|.+...+.|++||.|.+ |+|
T Consensus 6 p~~~k~i~v~e~--Ggy--dvlk~ed~pv~---~papgel~iknka~GlNfid~y~RkGlY~~~plPytpGmEaa--GvV 76 (336)
T KOG1197|consen 6 PPLLKCIVVTEF--GGY--DVLKLEDRPVP---PPAPGELTIKNKACGLNFIDLYFRKGLYDPAPLPYTPGMEAA--GVV 76 (336)
T ss_pred CchheEEEEecc--CCc--ceEEEeeecCC---CCCCCceEEeehhcCccHHHHHHhccccCCCCCCcCCCcccc--eEE
Confidence 456789999999 888 56666665555 568999999999999999999999999877778999999955 599
Q ss_pred EEecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 84 KVLDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
++||++|+++++||||+.+ |.|+++..+|...++++ |+.+++. ++|++...++|||..+.+..++++|++||+|.
T Consensus 77 vAvG~gvtdrkvGDrVayl~~~g~yaee~~vP~~kv~~v-pe~i~~k-~aaa~llq~lTAy~ll~e~y~vkpGhtVlvha 154 (336)
T KOG1197|consen 77 VAVGEGVTDRKVGDRVAYLNPFGAYAEEVTVPSVKVFKV-PEAITLK-EAAALLLQGLTAYMLLFEAYNVKPGHTVLVHA 154 (336)
T ss_pred EEecCCccccccccEEEEeccchhhheeccccceeeccC-CcccCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEe
Confidence 9999999999999999987 78999999999999999 9994444 37788889999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHH
Q 019332 161 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 161 a~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~ 239 (342)
|+||+|++++|+++..|+++|+++++++|++.++ +.|+.+.++|+.+ |+.+++.++|+| |+|+++|.+|.+.+...+
T Consensus 155 AAGGVGlll~Ql~ra~~a~tI~~asTaeK~~~ak-enG~~h~I~y~~e-D~v~~V~kiTngKGVd~vyDsvG~dt~~~sl 232 (336)
T KOG1197|consen 155 AAGGVGLLLCQLLRAVGAHTIATASTAEKHEIAK-ENGAEHPIDYSTE-DYVDEVKKITNGKGVDAVYDSVGKDTFAKSL 232 (336)
T ss_pred ccccHHHHHHHHHHhcCcEEEEEeccHHHHHHHH-hcCCcceeeccch-hHHHHHHhccCCCCceeeeccccchhhHHHH
Confidence 9999999999999999999999999999999999 9999999999998 999999999988 999999999999999999
Q ss_pred HhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc---cchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY---HLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
.+|++.|.+|.+|..++. ..++....+..+.+++...++..+. ........+++.++.+|.+++.+..+|||
T Consensus 233 ~~Lk~~G~mVSfG~asgl-----~~p~~l~~ls~k~l~lvrpsl~gYi~g~~el~~~v~rl~alvnsg~lk~~I~~~ypl 307 (336)
T KOG1197|consen 233 AALKPMGKMVSFGNASGL-----IDPIPLNQLSPKALQLVRPSLLGYIDGEVELVSYVARLFALVNSGHLKIHIDHVYPL 307 (336)
T ss_pred HHhccCceEEEeccccCC-----CCCeehhhcChhhhhhccHhhhcccCCHHHHHHHHHHHHHHhhcCccceeeeeecch
Confidence 999999999999998775 3344455555566666555443332 22234567888899999999999999999
Q ss_pred ccHHHHHHHHHcCCccceEEEEecCC
Q 019332 317 ESAPATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
+++.+|+.+++++...||+++.+.+|
T Consensus 308 s~vadA~~diesrktvGkvlLlp~~~ 333 (336)
T KOG1197|consen 308 SKVADAHADIESRKTVGKVLLLPGPE 333 (336)
T ss_pred HHHHHHHHHHHhhhccceEEEeCCcc
Confidence 99999999999999999999988764
|
|
| >PLN03154 putative allyl alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-50 Score=362.56 Aligned_cols=337 Identities=69% Similarity=1.178 Sum_probs=279.3
Q ss_pred ccccEEEEecccCCCCCCCceEEEEe-eccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTES-SIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~-~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
.++|+|.+.+.+.|.|.+.+|++++. +.+.|.+++++|||||+.|+++||.|+....+......+|.++|+++.|.|+|
T Consensus 7 ~~~~~~~~~~~~~~~~~~~~f~~~~~~~~~~~~~~~~gevlVkv~a~~inp~~~~~~~~~~~~~~~p~~~G~~~~~~G~v 86 (348)
T PLN03154 7 VENKQVILKNYIDGIPKETDMEVKLGNKIELKAPKGSGAFLVKNLYLSCDPYMRGRMRDFHDSYLPPFVPGQRIEGFGVS 86 (348)
T ss_pred ccceEEEEecCCCCCCCcccEEEEeecccCCCCCCCCCeEEEEEEEEccCHHHHHhhhccCCCCCCCcCCCCeeEeeEEE
Confidence 56799999998889999999999985 35555556899999999999999998865433222234688999977788899
Q ss_pred EEecCCCCCCCCCCEEEeccccceeEeecCCc--c--eeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 84 KVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ--L--FKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~--~--~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
.++|+++++|++||+|+++|+|++|..++.+. + +++ |+++++..++++++++++|||+++.+.+++++|++|||+
T Consensus 87 ~~vg~~v~~~~~Gd~V~~~~~~aey~~v~~~~~~~~~~~~-P~~~~~~~~aa~l~~~~~TA~~al~~~~~~~~g~~VlV~ 165 (348)
T PLN03154 87 KVVDSDDPNFKPGDLISGITGWEEYSLIRSSDNQLRKIQL-QDDIPLSYHLGLLGMAGFTAYAGFYEVCSPKKGDSVFVS 165 (348)
T ss_pred EEEecCCCCCCCCCEEEecCCcEEEEEEeccccceEEccC-cCCCCHHHHHHHcccHHHHHHHHHHHhcCCCCCCEEEEe
Confidence 99999999999999999999999999999864 5 445 788554423778999999999999877899999999999
Q ss_pred cCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHH
Q 019332 160 AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 160 ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~ 239 (342)
|++|++|++++|+|+..|++|+++++++++.+.+++++|++.++++++..++.+.+++.+++++|++|||+|+..+..++
T Consensus 166 GaaG~vG~~aiqlAk~~G~~Vi~~~~~~~k~~~~~~~lGa~~vi~~~~~~~~~~~i~~~~~~gvD~v~d~vG~~~~~~~~ 245 (348)
T PLN03154 166 AASGAVGQLVGQLAKLHGCYVVGSAGSSQKVDLLKNKLGFDEAFNYKEEPDLDAALKRYFPEGIDIYFDNVGGDMLDAAL 245 (348)
T ss_pred cCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHhcCCCEEEECCCcccHHHHHHHHCCCCcEEEEECCCHHHHHHHH
Confidence 99999999999999999999999999999988886469999999987421677888887766899999999998899999
Q ss_pred HhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccH
Q 019332 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESA 319 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~ 319 (342)
++++++|+++.+|..++..............++.+++++.++....+.....+.++++++++.+|++++.+..+|+|+++
T Consensus 246 ~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~~~~~~~~~~~~~~~l~~~G~l~~~~~~~~~L~~~ 325 (348)
T PLN03154 246 LNMKIHGRIAVCGMVSLNSLSASQGIHNLYNLISKRIRMQGFLQSDYLHLFPQFLENVSRYYKQGKIVYIEDMSEGLESA 325 (348)
T ss_pred HHhccCCEEEEECccccCCCCCCCCcccHHHHhhccceEEEEEHHHHHHHHHHHHHHHHHHHHCCCccCceecccCHHHH
Confidence 99999999999997654321111111234567778889888765544333456788999999999999888888999999
Q ss_pred HHHHHHHHcCCccceEEEEecCC
Q 019332 320 PATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 320 ~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
++|++.+++++..||+||++++|
T Consensus 326 ~~A~~~l~~g~~~GKvVl~~~~~ 348 (348)
T PLN03154 326 PAALVGLFSGKNVGKQVIRVAKE 348 (348)
T ss_pred HHHHHHHHcCCCCceEEEEecCC
Confidence 99999999999999999999765
|
|
| >KOG0023 consensus Alcohol dehydrogenase, class V [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-49 Score=328.64 Aligned_cols=311 Identities=22% Similarity=0.226 Sum_probs=268.9
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
.+.++++|.++++ +++ +.++.++++.| +++++||+|||+|+|||++|++++.|.++...+|.++|||..| +
T Consensus 6 ~p~k~~g~~~~~~--~G~----l~p~~~~~~~~-~~g~~dv~vkI~~cGIChsDlH~~~gdwg~s~~PlV~GHEiaG--~ 76 (360)
T KOG0023|consen 6 IPEKQFGWAARDP--SGV----LSPEVFSFPVR-EPGENDVLVKIEYCGVCHSDLHAWKGDWGLSKYPLVPGHEIAG--V 76 (360)
T ss_pred CchhhEEEEEECC--CCC----CCcceeEcCCC-CCCCCcEEEEEEEEeccchhHHHhhccCCcccCCccCCceeeE--E
Confidence 4578899999998 665 24444456656 4599999999999999999999999999888899999999555 9
Q ss_pred EEEecCCCCCCCCCCEEEe-c-------------------------------------cccceeEeecCCcceeecCCCC
Q 019332 83 AKVLDSENPEFKKGDLVWG-M-------------------------------------TGWEEYSLVTAPQLFKIQHTDV 124 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~-~-------------------------------------g~~~~~~~v~~~~~~~i~p~~~ 124 (342)
|++||++|++|++||||-. + |+|++|+++++..+++| |+++
T Consensus 77 VvkvGs~V~~~kiGD~vGVg~~~~sC~~CE~C~~~~E~yCpk~~~t~~g~~~DGt~~~ggf~~~~~v~~~~a~kI-P~~~ 155 (360)
T KOG0023|consen 77 VVKVGSNVTGFKIGDRVGVGWLNGSCLSCEYCKSGNENYCPKMHFTYNGVYHDGTITQGGFQEYAVVDEVFAIKI-PENL 155 (360)
T ss_pred EEEECCCcccccccCeeeeeEEeccccCccccccCCcccCCceeEeccccccCCCCccCccceeEEEeeeeEEEC-CCCC
Confidence 9999999999999999952 0 56999999999999999 9997
Q ss_pred CccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEe
Q 019332 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFN 204 (342)
Q Consensus 125 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~ 204 (342)
++.. +|.+.|++.|+|.+|. ..++.||+++.|.|+ ||+|.+++|+|+++|.+|+++++++++.+.+.+.||++..++
T Consensus 156 pl~~-aAPlLCaGITvYspLk-~~g~~pG~~vgI~Gl-GGLGh~aVq~AKAMG~rV~vis~~~~kkeea~~~LGAd~fv~ 232 (360)
T KOG0023|consen 156 PLAS-AAPLLCAGITVYSPLK-RSGLGPGKWVGIVGL-GGLGHMAVQYAKAMGMRVTVISTSSKKKEEAIKSLGADVFVD 232 (360)
T ss_pred Chhh-ccchhhcceEEeehhH-HcCCCCCcEEEEecC-cccchHHHHHHHHhCcEEEEEeCCchhHHHHHHhcCcceeEE
Confidence 7764 9999999999999994 578899999999998 669999999999999999999999855555554899998888
Q ss_pred cC-CchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeeccee
Q 019332 205 YK-EEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV 283 (342)
Q Consensus 205 ~~-~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (342)
.. ++ +..+.+.+.+++++|-+.+. ....++.++.+++.+|++|.+|.+.. ........+..+...+.|+.+
T Consensus 233 ~~~d~-d~~~~~~~~~dg~~~~v~~~-a~~~~~~~~~~lk~~Gt~V~vg~p~~------~~~~~~~~lil~~~~I~GS~v 304 (360)
T KOG0023|consen 233 STEDP-DIMKAIMKTTDGGIDTVSNL-AEHALEPLLGLLKVNGTLVLVGLPEK------PLKLDTFPLILGRKSIKGSIV 304 (360)
T ss_pred ecCCH-HHHHHHHHhhcCcceeeeec-cccchHHHHHHhhcCCEEEEEeCcCC------cccccchhhhcccEEEEeecc
Confidence 87 55 89999999888888888877 44788999999999999999998765 234566677788899999988
Q ss_pred cccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 284 RDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.. +...++++++...+.+++.+..+ +++++++|+++|+++...++.||++.
T Consensus 305 G~-----~ket~E~Ldf~a~~~ik~~IE~v-~~~~v~~a~erm~kgdV~yRfVvD~s 355 (360)
T KOG0023|consen 305 GS-----RKETQEALDFVARGLIKSPIELV-KLSEVNEAYERMEKGDVRYRFVVDVS 355 (360)
T ss_pred cc-----HHHHHHHHHHHHcCCCcCceEEE-ehhHHHHHHHHHHhcCeeEEEEEEcc
Confidence 88 78899999999999999887654 99999999999999999999999875
|
|
| >COG2130 Putative NADP-dependent oxidoreductases [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-48 Score=320.33 Aligned_cols=330 Identities=47% Similarity=0.816 Sum_probs=293.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
.+.|++.+.++|.|...+|++++.++| .++++|||+|+.|.+++|.-+-.+.. .+++.+|+-+|..+.|-++.+.+
T Consensus 9 ~~~~~la~rP~g~p~~d~F~lee~~vp---~p~~GqvLl~~~ylS~DPymRgrm~d-~~SY~~P~~lG~~~~gg~V~~Vv 84 (340)
T COG2130 9 NRRIVLASRPEGAPVPDDFRLEEVDVP---EPGEGQVLLRTLYLSLDPYMRGRMSD-APSYAPPVELGEVMVGGTVAKVV 84 (340)
T ss_pred hheeeeccCCCCCCCCCCceeEeccCC---CCCcCceEEEEEEeccCHHHeecccC-CcccCCCcCCCceeECCeeEEEE
Confidence 388999998889999999999998887 44899999999999999965543333 35677899999999996666777
Q ss_pred cCCCCCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHH
Q 019332 87 DSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVG 166 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG 166 (342)
-|+.+.|++||.|.+..+|++|..++.+.+.+++|...++++....|..++.|||.+|.+.++.++|++|+|.+|+|++|
T Consensus 85 ~S~~~~f~~GD~V~~~~GWq~y~i~~~~~l~Kvd~~~~pl~~~LgvLGmpG~TAY~gLl~igqpk~GetvvVSaAaGaVG 164 (340)
T COG2130 85 ASNHPGFQPGDIVVGVSGWQEYAISDGEGLRKLDPSPAPLSAYLGVLGMPGLTAYFGLLDIGQPKAGETVVVSAAAGAVG 164 (340)
T ss_pred ecCCCCCCCCCEEEecccceEEEeechhhceecCCCCCCcchHHhhcCCchHHHHHHHHHhcCCCCCCEEEEEecccccc
Confidence 88899999999999999999999999999999966665677668899999999999999999999999999999999999
Q ss_pred HHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCC
Q 019332 167 QLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHG 246 (342)
Q Consensus 167 ~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G 246 (342)
..+.|+||..|++|+.++.+++|.+++++.+|.|.++||+.. ++.+.+++.+++|+|+.||++|++.++.++..|+.++
T Consensus 165 svvgQiAKlkG~rVVGiaGg~eK~~~l~~~lGfD~~idyk~~-d~~~~L~~a~P~GIDvyfeNVGg~v~DAv~~~ln~~a 243 (340)
T COG2130 165 SVVGQIAKLKGCRVVGIAGGAEKCDFLTEELGFDAGIDYKAE-DFAQALKEACPKGIDVYFENVGGEVLDAVLPLLNLFA 243 (340)
T ss_pred hHHHHHHHhhCCeEEEecCCHHHHHHHHHhcCCceeeecCcc-cHHHHHHHHCCCCeEEEEEcCCchHHHHHHHhhcccc
Confidence 999999999999999999999999999966999999999999 9999999999999999999999999999999999999
Q ss_pred EEEEEceeccccCC-CCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHH
Q 019332 247 RIAVCGMISQYNLD-RPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLI 324 (342)
Q Consensus 247 ~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~ 324 (342)
|++.+|..+.+|-. .+........++.+.+++.|+..... .....+..+++..++++|+++...+.+-+||++++||.
T Consensus 244 Ri~~CG~IS~YN~~~~~~gp~~l~~l~~kr~~v~Gfiv~~~~~~~~~e~~~~l~~wv~~GKi~~~eti~dGlEnaP~Af~ 323 (340)
T COG2130 244 RIPVCGAISQYNAPELPPGPRRLPLLMAKRLRVQGFIVASDYDQRFPEALRELGGWVKEGKIQYRETIVDGLENAPEAFI 323 (340)
T ss_pred ceeeeeehhhcCCCCCCCCcchhhHHHhhhheeEEEEechhhhhhhHHHHHHHHHHHHcCceeeEeeehhhhhccHHHHH
Confidence 99999998887665 34445556677788999999988444 44555899999999999999999988779999999999
Q ss_pred HHHcCCccceEEEEecC
Q 019332 325 GLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 325 ~~~~~~~~gkvvv~~~~ 341 (342)
-+.+++++||.|+++.+
T Consensus 324 gLl~G~N~GK~vvKv~~ 340 (340)
T COG2130 324 GLLSGKNFGKLVVKVAD 340 (340)
T ss_pred HHhcCCccceEEEEecC
Confidence 99999999999999864
|
|
| >cd08295 double_bond_reductase_like Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-47 Score=345.01 Aligned_cols=331 Identities=71% Similarity=1.228 Sum_probs=271.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeecc--ccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIE--LQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~--~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v 83 (342)
.|.+++.....+.|.+++|++.+.++| .| .++++||||||+|+++||.|++.+.|.... ..+|.++|+++.|.|++
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p-~p~~~~vlv~v~~~~inp~d~~~~~g~~~~~~~~p~~~g~~~~g~~~~ 81 (338)
T cd08295 3 NKQVILKAYVTGFPKESDLELRTTKLTLKVP-PGGSGDVLVKNLYLSCDPYMRGRMKGHDDSLYLPPFKPGEVITGYGVA 81 (338)
T ss_pred ceEEEEecCCCCCCCccceEEEEecCCcCCC-CCCCCeEEEEEEEEeeCHHHHHhhccCCccccCCCcCCCCeEeccEEE
Confidence 466677666555666788999888773 34 469999999999999999999988875432 35688999988888899
Q ss_pred EEecCCCCCCCCCCEEEeccccceeEeecC-CcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 84 KVLDSENPEFKKGDLVWGMTGWEEYSLVTA-PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~-~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
..||+.+++|++||+|+++|+|+||++++. ..+++++|+++++.+++++++++++|||+++.+.+++++|++|||+|++
T Consensus 82 ~~v~~~v~~~~vGd~V~~~g~~aey~~v~~~~~~~~lp~~~~~~~~~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~Ga~ 161 (338)
T cd08295 82 KVVDSGNPDFKVGDLVWGFTGWEEYSLIPRGQDLRKIDHTDVPLSYYLGLLGMPGLTAYAGFYEVCKPKKGETVFVSAAS 161 (338)
T ss_pred EEEecCCCCCCCCCEEEecCCceeEEEecchhceeecCCCCCCHHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEEecCc
Confidence 999999999999999999999999999999 7899993356555534788999999999999888899999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH-cCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK-FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~-~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++|+|+..|++|+++++++++.++++ + +|+++++++.+..++.+.+++.+++++|++||++|+..+..++++
T Consensus 162 G~vG~~aiqlAk~~G~~Vi~~~~~~~~~~~~~-~~lGa~~vi~~~~~~~~~~~i~~~~~~gvd~v~d~~g~~~~~~~~~~ 240 (338)
T cd08295 162 GAVGQLVGQLAKLKGCYVVGSAGSDEKVDLLK-NKLGFDDAFNYKEEPDLDAALKRYFPNGIDIYFDNVGGKMLDAVLLN 240 (338)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhcCCceeEEcCCcccHHHHHHHhCCCCcEEEEECCCHHHHHHHHHH
Confidence 99999999999999999999999999999998 6 999999997642267788888775689999999999889999999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHH
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPA 321 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~ 321 (342)
++++|+++.+|...+...............+.+++++.++....+.+...+.++++++++.+|.+++.+...|+++++.+
T Consensus 241 l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~~ 320 (338)
T cd08295 241 MNLHGRIAACGMISQYNLEWPEGVRNLLNIIYKRVKIQGFLVGDYLHRYPEFLEEMSGYIKEGKLKYVEDIADGLESAPE 320 (338)
T ss_pred hccCcEEEEecccccCCCCCCCCccCHHHHhhccceeeEEEehhhHHHHHHHHHHHHHHHHCCCeEceeecccCHHHHHH
Confidence 99999999998754421100001122345566777777765544333345678889999999999988777899999999
Q ss_pred HHHHHHcCCccceEEEEe
Q 019332 322 TLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 322 a~~~~~~~~~~gkvvv~~ 339 (342)
|++.+++++..||+|+++
T Consensus 321 A~~~~~~~~~~GkvVl~~ 338 (338)
T cd08295 321 AFVGLFTGSNIGKQVVKV 338 (338)
T ss_pred HHHHHhcCCCCceEEEEC
Confidence 999999999899999874
|
This group includes proteins identified as the Arabidopsis alkenal double bond reductase and leukotriene B4 12-hydroxydehydrogenase. The Arabidopsis enzyme, a member of the medium chain dehydrogenase/reductase family, catalyzes the reduction of 7-8-double bond of phenylpropanal substrates as a plant defense mechanism. Prostaglandins and related eicosanoids (lipid mediators involved in host defense and inflamation) are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. Leukotriene B4 (LTB4) can be metabolized by LTB4 20-hydroxylase in |
| >COG1062 AdhC Zn-dependent alcohol dehydrogenases, class III [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-48 Score=326.27 Aligned_cols=310 Identities=21% Similarity=0.256 Sum_probs=265.6
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
|++||.+..++ ++| |++++.+++ +|+++|||||+.|+|+||+|...+.|..+.. +|.++||| |.|+|+
T Consensus 1 mk~~aAV~~~~--~~P----l~i~ei~l~---~P~~gEVlVri~AtGVCHTD~~~~~G~~p~~-~P~vLGHE--gAGiVe 68 (366)
T COG1062 1 MKTRAAVAREA--GKP----LEIEEVDLD---PPRAGEVLVRITATGVCHTDAHTLSGDDPEG-FPAVLGHE--GAGIVE 68 (366)
T ss_pred CCceEeeeecC--CCC----eEEEEEecC---CCCCCeEEEEEEEeeccccchhhhcCCCCCC-Cceecccc--cccEEE
Confidence 46799999999 999 899998888 7799999999999999999999999987766 89999999 555999
Q ss_pred EecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeecC
Q 019332 85 VLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVTA 113 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~~ 113 (342)
+||++|+++++||+|+.. ++|++|.+++.
T Consensus 69 ~VG~gVt~vkpGDhVI~~f~p~CG~C~~C~sGk~nlC~~~~~~~~kG~m~dGttrls~~~~~~~h~lG~stFa~y~vv~~ 148 (366)
T COG1062 69 AVGEGVTSVKPGDHVILLFTPECGQCKFCLSGKPNLCEAIRATQGKGTMPDGTTRLSGNGVPVYHYLGCSTFAEYTVVHE 148 (366)
T ss_pred EecCCccccCCCCEEEEcccCCCCCCchhhCCCcccccchhhhcccccccCCceeeecCCcceeeeeccccchhheeecc
Confidence 999999999999999821 38999999999
Q ss_pred CcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHH
Q 019332 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDL 192 (342)
Q Consensus 114 ~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~ 192 (342)
..+.++ ++..++.. ++.+.|..+|.+.+..+.+++++|++|.|.|- |++|++++|-|+..|+ ++|+++.+++|+++
T Consensus 149 ~s~vki-~~~~p~~~-a~llGCgV~TG~Gav~nta~v~~G~tvaV~Gl-GgVGlaaI~gA~~agA~~IiAvD~~~~Kl~~ 225 (366)
T COG1062 149 ISLVKI-DPDAPLEK-ACLLGCGVTTGIGAVVNTAKVEPGDTVAVFGL-GGVGLAAIQGAKAAGAGRIIAVDINPEKLEL 225 (366)
T ss_pred cceEEC-CCCCCccc-eEEEeeeeccChHHhhhcccCCCCCeEEEEec-cHhHHHHHHHHHHcCCceEEEEeCCHHHHHH
Confidence 999999 66644442 88999999999999989999999999999996 9999999999999999 99999999999999
Q ss_pred HHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHH
Q 019332 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYL 271 (342)
Q Consensus 193 ~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 271 (342)
++ +||+++++|.++..++.+.+++++++|+|.+|||+|. ..+..++.++.++|+.+.+|..... ...+.....+
T Consensus 226 A~-~fGAT~~vn~~~~~~vv~~i~~~T~gG~d~~~e~~G~~~~~~~al~~~~~~G~~v~iGv~~~~----~~i~~~~~~l 300 (366)
T COG1062 226 AK-KFGATHFVNPKEVDDVVEAIVELTDGGADYAFECVGNVEVMRQALEATHRGGTSVIIGVAGAG----QEISTRPFQL 300 (366)
T ss_pred HH-hcCCceeecchhhhhHHHHHHHhcCCCCCEEEEccCCHHHHHHHHHHHhcCCeEEEEecCCCC----ceeecChHHe
Confidence 99 9999999999875248999999999899999999999 8999999999999999999985532 1122333444
Q ss_pred HhcceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 272 VTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
... .++.|+.+..-.. +.++..++++.++|++... ++..++|+|++|||+.|.+++.. |-||.
T Consensus 301 v~g-r~~~Gs~~G~~~p--~~diP~lv~~y~~Gkl~~d~lvt~~~~Le~INeaf~~m~~G~~I-R~Vi~ 365 (366)
T COG1062 301 VTG-RVWKGSAFGGARP--RSDIPRLVDLYMAGKLPLDRLVTHTIPLEDINEAFDLMHEGKSI-RSVIR 365 (366)
T ss_pred ecc-ceEEEEeecCCcc--ccchhHHHHHHHcCCCchhHHhhccccHHHHHHHHHHHhCCcee-eEEec
Confidence 443 6777776654321 5678999999999999864 55566999999999999999876 44443
|
|
| >KOG0024 consensus Sorbitol dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.9e-47 Score=319.48 Aligned_cols=308 Identities=20% Similarity=0.216 Sum_probs=261.6
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC---ccccCCCCCcccccE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS---YVESFKPGMPISGYG 81 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~---~~~p~~~G~e~~G~g 81 (342)
..|+|.++... .+++++ +.|.|....|+||+|++.++|||.||+|.+..+... .+.|+++|||.+|
T Consensus 3 ~~~~A~vl~g~-------~di~i~--~~p~p~i~~p~eVlv~i~a~GICGSDvHy~~~G~ig~~v~k~PmvlGHEssG-- 71 (354)
T KOG0024|consen 3 ADNLALVLRGK-------GDIRIE--QRPIPTITDPDEVLVAIKAVGICGSDVHYYTHGRIGDFVVKKPMVLGHESSG-- 71 (354)
T ss_pred cccceeEEEcc-------CceeEe--eCCCCCCCCCCEEEEEeeeEEecCccchhhccCCcCcccccccccccccccc--
Confidence 46789999877 344665 677776669999999999999999999999987632 2468999999888
Q ss_pred EEEEecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccchh
Q 019332 82 VAKVLDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYT 130 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~ 130 (342)
+|.++|+.|+++|+||||+.- |++++|++++++.++++ |++ ++++.
T Consensus 72 iV~evG~~Vk~LkVGDrVaiEpg~~c~~cd~CK~GrYNlCp~m~f~atpp~~G~la~y~~~~~dfc~KL-Pd~--vs~ee 148 (354)
T KOG0024|consen 72 IVEEVGDEVKHLKVGDRVAIEPGLPCRDCDFCKEGRYNLCPHMVFCATPPVDGTLAEYYVHPADFCYKL-PDN--VSFEE 148 (354)
T ss_pred chhhhcccccccccCCeEEecCCCccccchhhhCcccccCCccccccCCCcCCceEEEEEechHheeeC-CCC--Cchhh
Confidence 999999999999999999831 78999999999999999 999 66668
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc-
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE- 208 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~- 208 (342)
++|..++++++||. +.++++.|++|||+|| |+||+.+...|+++|| +|++++-.++|+++++ +||++.+.+....
T Consensus 149 GAl~ePLsV~~HAc-r~~~vk~Gs~vLV~GA-GPIGl~t~l~Aka~GA~~VVi~d~~~~Rle~Ak-~~Ga~~~~~~~~~~ 225 (354)
T KOG0024|consen 149 GALIEPLSVGVHAC-RRAGVKKGSKVLVLGA-GPIGLLTGLVAKAMGASDVVITDLVANRLELAK-KFGATVTDPSSHKS 225 (354)
T ss_pred cccccchhhhhhhh-hhcCcccCCeEEEECC-cHHHHHHHHHHHHcCCCcEEEeecCHHHHHHHH-HhCCeEEeeccccc
Confidence 88999999999999 6699999999999997 9999999999999999 9999999999999999 7999877655542
Q ss_pred --hhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 209 --PDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 209 --~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
.++.+.+++..++ .+|+.|||.|. ..++.++.+++.+|.+++.|.-.. ...++......+++++.|..-+
T Consensus 226 ~~~~~~~~v~~~~g~~~~d~~~dCsG~~~~~~aai~a~r~gGt~vlvg~g~~------~~~fpi~~v~~kE~~~~g~fry 299 (354)
T KOG0024|consen 226 SPQELAELVEKALGKKQPDVTFDCSGAEVTIRAAIKATRSGGTVVLVGMGAE------EIQFPIIDVALKEVDLRGSFRY 299 (354)
T ss_pred cHHHHHHHHHhhccccCCCeEEEccCchHHHHHHHHHhccCCEEEEeccCCC------ccccChhhhhhheeeeeeeeee
Confidence 1455556665554 69999999999 789999999999999999987544 3456778888999999998765
Q ss_pred ccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCc-cceEEEEec
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRN-VGKQVVAVA 340 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvv~~~ 340 (342)
. +..+...++++.+|++... ++..|+++++.+|++.+..++. .-|+++...
T Consensus 300 ~-----~~~y~~ai~li~sGki~~k~lIT~r~~~~~~~eAf~~~~~~~~~~iKv~i~~~ 353 (354)
T KOG0024|consen 300 C-----NGDYPTAIELVSSGKIDVKPLITHRYKFDDADEAFETLQHGEEGVIKVIITGP 353 (354)
T ss_pred c-----cccHHHHHHHHHcCCcCchhheecccccchHHHHHHHHHhCcCCceEEEEeCC
Confidence 5 5678999999999998865 5556699999999999998874 338887764
|
|
| >cd08281 liver_ADH_like1 Zinc-dependent alcohol dehydrogenases (ADH) and class III ADG (AKA formaldehyde dehydrogenase) | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-46 Score=338.58 Aligned_cols=312 Identities=18% Similarity=0.245 Sum_probs=261.6
Q ss_pred ccEEEEecccCCCC----CCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 7 NKQVILKDYVSGFP----KETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 7 ~~a~~~~~~~~g~p----~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
|||+++.++ |.| .++.+++++.+. | .++++||+|||.+++||++|++.+.|..+ ..+|.++|||++| +
T Consensus 1 mka~~~~~~--g~~~~~~~~~~l~~~~~~~--P-~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~GhE~~G--~ 72 (371)
T cd08281 1 MRAAVLRET--GAPTPYADSRPLVIEEVEL--D-PPGPGEVLVKIAAAGLCHSDLSVINGDRP-RPLPMALGHEAAG--V 72 (371)
T ss_pred CcceEEEec--ccccccccCCCceEEEeec--C-CCCCCeEEEEEEEEeeCccchHhhcCCCC-CCCCccCCcccee--E
Confidence 689999998 754 135677766544 4 45899999999999999999999888643 3468999999777 9
Q ss_pred EEEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEee
Q 019332 83 AKVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLV 111 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v 111 (342)
|+++|++++++++||+|++. |+|+||+.+
T Consensus 73 V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~g~G~~aey~~v 152 (371)
T cd08281 73 VVEVGEGVTDLEVGDHVVLVFVPSCGHCRPCAEGRPALCEPGAAANGAGTLLSGGRRLRLRGGEINHHLGVSAFAEYAVV 152 (371)
T ss_pred EEEeCCCCCcCCCCCEEEEccCCCCCCCccccCCCcccccCccccccccccccCcccccccCcccccccCcccceeeEEe
Confidence 99999999999999999852 589999999
Q ss_pred cCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhH
Q 019332 112 TAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKI 190 (342)
Q Consensus 112 ~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~ 190 (342)
+.+.++++ |++++.. +++.+.++++|||+++.+.++++++++|||+|+ |++|++++|+|+..|+ +|++++++++|+
T Consensus 153 ~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~i~~g~~VlV~G~-G~vG~~a~~lak~~G~~~Vi~~~~~~~r~ 229 (371)
T cd08281 153 SRRSVVKI-DKDVPLE-IAALFGCAVLTGVGAVVNTAGVRPGQSVAVVGL-GGVGLSALLGAVAAGASQVVAVDLNEDKL 229 (371)
T ss_pred cccceEEC-CCCCChH-HhhhhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCcEEEEcCCHHHH
Confidence 99999999 9995444 377788899999999877788999999999985 9999999999999999 799999999999
Q ss_pred HHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchH
Q 019332 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
++++ ++|++.++++.+. ++.+.+++.+++++|++|||+|. ..+..++++++++|+++.+|..... ........
T Consensus 230 ~~a~-~~Ga~~~i~~~~~-~~~~~i~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~~~~ 303 (371)
T cd08281 230 ALAR-ELGATATVNAGDP-NAVEQVRELTGGGVDYAFEMAGSVPALETAYEITRRGGTTVTAGLPDPE----ARLSVPAL 303 (371)
T ss_pred HHHH-HcCCceEeCCCch-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEccCCCC----ceeeecHH
Confidence 9998 9999999999887 88889988877689999999997 7889999999999999999975431 01123455
Q ss_pred HHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 270 YLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
.++.+++++.++....+. ..+.++++++++.+|++++ .+..+|+|+++++|++.+.+++..+|+|+
T Consensus 304 ~~~~~~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~vi~ 371 (371)
T cd08281 304 SLVAEERTLKGSYMGSCV--PRRDIPRYLALYLSGRLPVDKLLTHRLPLDEINEGFDRLAAGEAVRQVIL 371 (371)
T ss_pred HHhhcCCEEEEEecCCCC--hHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCceeeeeC
Confidence 677889999887655432 2456788999999999975 46778899999999999999988877663
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group contains members identified as zinc dependent alcohol dehydrogenases (ADH), and class III ADG (aka formaldehyde dehydrogenase, FDH). Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also know as glutathione-dependent formaldehyde dehyd |
| >KOG0022 consensus Alcohol dehydrogenase, class III [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.6e-46 Score=308.31 Aligned_cols=312 Identities=21% Similarity=0.245 Sum_probs=267.5
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
..++||.+++++ +.| |.+++.+++ ||+.+||+||+.++++|++|...+.|..+...+|.++|||.. |+|
T Consensus 5 vI~CKAAV~w~a--~~P----L~IEei~V~---pPka~EVRIKI~~t~vCHTD~~~~~g~~~~~~fP~IlGHEaa--GIV 73 (375)
T KOG0022|consen 5 VITCKAAVAWEA--GKP----LVIEEIEVA---PPKAHEVRIKILATGVCHTDAYVWSGKDPEGLFPVILGHEAA--GIV 73 (375)
T ss_pred ceEEeEeeeccC--CCC----eeEEEEEeC---CCCCceEEEEEEEEeeccccceeecCCCccccCceEecccce--eEE
Confidence 367899999999 999 899998888 779999999999999999999999998777788999999955 599
Q ss_pred EEecCCCCCCCCCCEEEec----------------------------------------------------cccceeEee
Q 019332 84 KVLDSENPEFKKGDLVWGM----------------------------------------------------TGWEEYSLV 111 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~~~v 111 (342)
+.||+.|+.+++||+|..+ .+|+||.++
T Consensus 74 ESvGegV~~vk~GD~Viplf~p~CgeCk~C~s~ktNlC~~~~~~~~~~~~~~DgtSRF~~~gk~iyHfmg~StFsEYTVv 153 (375)
T KOG0022|consen 74 ESVGEGVTTVKPGDHVIPLFTPQCGECKFCKSPKTNLCEKFRADNGKGGMPYDGTSRFTCKGKPIYHFMGTSTFSEYTVV 153 (375)
T ss_pred EEecCCccccCCCCEEeeccccCCCCcccccCCCCChhhhhcccccccccccCCceeeeeCCCceEEecccccceeEEEe
Confidence 9999999999999999842 389999999
Q ss_pred cCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhH
Q 019332 112 TAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKI 190 (342)
Q Consensus 112 ~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~ 190 (342)
+...+.++ ++..|++. ++.|.+..+|+|.|..+.+++++|+++.|+|- |++|+++++-|++.|| ++|+++-+++|+
T Consensus 154 ~~~~v~kI-d~~aPl~k-vcLLgCGvsTG~GAa~~~Akv~~GstvAVfGL-G~VGLav~~Gaka~GAsrIIgvDiN~~Kf 230 (375)
T KOG0022|consen 154 DDISVAKI-DPSAPLEK-VCLLGCGVSTGYGAAWNTAKVEPGSTVAVFGL-GGVGLAVAMGAKAAGASRIIGVDINPDKF 230 (375)
T ss_pred ecceeEec-CCCCChhh-eeEeeccccccchhhhhhcccCCCCEEEEEec-chHHHHHHHhHHhcCcccEEEEecCHHHH
Confidence 99999999 77756663 88999999999999999999999999999996 9999999999999999 999999999999
Q ss_pred HHHHHHcCCCeeEecCCch-hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccc
Q 019332 191 DLLKNKFGFDEAFNYKEEP-DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHN 267 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~ 267 (342)
+.++ +||+.+.+|..+.. ...+.++++|++|+|+-|||+|. +.+.+++.+...+ |.-+.+|..... ......
T Consensus 231 ~~ak-~fGaTe~iNp~d~~~~i~evi~EmTdgGvDysfEc~G~~~~m~~al~s~h~GwG~sv~iGv~~~~----~~i~~~ 305 (375)
T KOG0022|consen 231 EKAK-EFGATEFINPKDLKKPIQEVIIEMTDGGVDYSFECIGNVSTMRAALESCHKGWGKSVVIGVAAAG----QEISTR 305 (375)
T ss_pred HHHH-hcCcceecChhhccccHHHHHHHHhcCCceEEEEecCCHHHHHHHHHHhhcCCCeEEEEEecCCC----cccccc
Confidence 9999 99999999987432 47889999999999999999999 8899999999997 999999975432 122233
Q ss_pred hHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 268 LMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
.+.++. +.++.|+.+..+.. +..+..+.+...++.++.. ++.+.||+++++||+.|.+++.. +.|+.
T Consensus 306 p~~l~~-GR~~~Gs~FGG~K~--~~~iP~lV~~y~~~~l~ld~~ITh~l~f~~In~AF~ll~~Gksi-R~vl~ 374 (375)
T KOG0022|consen 306 PFQLVT-GRTWKGSAFGGFKS--KSDIPKLVKDYMKKKLNLDEFITHELPFEEINKAFDLLHEGKSI-RCVLW 374 (375)
T ss_pred hhhhcc-ccEEEEEecccccc--hhhhhHHHHHHHhCccchhhhhhcccCHHHHHHHHHHHhCCceE-EEEEe
Confidence 344443 56667766666543 6678888888889988865 55555999999999999999876 66664
|
|
| >cd08293 PTGR2 Prostaglandin reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-44 Score=325.73 Aligned_cols=327 Identities=37% Similarity=0.616 Sum_probs=254.1
Q ss_pred ccEEEEeccc--CCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccC---CCCccccCCCCCcccccE
Q 019332 7 NKQVILKDYV--SGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI---KGSYVESFKPGMPISGYG 81 (342)
Q Consensus 7 ~~a~~~~~~~--~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~---~~~~~~p~~~G~e~~G~g 81 (342)
.|.+++.... +|-|.++.+++++. |.|.+++++||||||.|+|||+.|+...... .....+|.++|||++|
T Consensus 3 ~~~~~~~~~~~~~~~~~~~~~~~~~~--~~p~~~~~~evlV~v~a~gin~~d~~~~~~~~~~~~~~~~~~~~G~e~~G-- 78 (345)
T cd08293 3 NKRVVLNSRPGKNGNPVAENFRVEEC--TLPDELNEGQVLVRTLYLSVDPYMRCRMNEDTGTDYLAPWQLSQVLDGGG-- 78 (345)
T ss_pred ceEEEEecccCCCCCCCccceEEEec--cCCCCCCCCeEEEEEEEEecCHHHHhhcccccccccCCCccCCCceEeeE--
Confidence 3666666654 56787888888764 4454335899999999999999986433211 1113457889999776
Q ss_pred EEEEecCCCCCCCCCCEEEec-cccceeEeecCCcceeecCCCCCc---cchhhccCCchhhHHHhhhhhcCCCCC--CE
Q 019332 82 VAKVLDSENPEFKKGDLVWGM-TGWEEYSLVTAPQLFKIQHTDVPL---SYYTGILGMPGMTAYAGFYEVCSPKQG--EC 155 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~-g~~~~~~~v~~~~~~~i~p~~~~~---~~~~a~l~~~~~ta~~al~~~~~~~~~--~~ 155 (342)
+|+++|+++++|++||+|+++ ++|+||+.++.+.++++ |++++. ++++++++.+++|||+++.+.++++++ ++
T Consensus 79 ~V~~vG~~v~~~~~Gd~V~~~~~~~ae~~~v~~~~~~~i-P~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~~~ 157 (345)
T cd08293 79 VGVVEESKHQKFAVGDIVTSFNWPWQTYAVLDGSSLEKV-DPQLVDGHLSYFLGAVGLPGLTALIGIQEKGHITPGANQT 157 (345)
T ss_pred EEEEeccCCCCCCCCCEEEecCCCceeEEEecHHHeEEc-CccccccchhHHhhhcCcHHHHHHHHHHHhccCCCCCCCE
Confidence 999999999999999999998 58999999999999999 887422 222457788999999999877888877 99
Q ss_pred EEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
|||+|++|++|++++|+|++.|+ +|+++++++++.+.+++++|++.++++++. ++.+.+++.+++++|++|||+|+..
T Consensus 158 VlI~ga~g~vG~~aiqlAk~~G~~~Vi~~~~s~~~~~~~~~~lGa~~vi~~~~~-~~~~~i~~~~~~gvd~vid~~g~~~ 236 (345)
T cd08293 158 MVVSGAAGACGSLAGQIGRLLGCSRVVGICGSDEKCQLLKSELGFDAAINYKTD-NVAERLRELCPEGVDVYFDNVGGEI 236 (345)
T ss_pred EEEECCCcHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHHHhcCCcEEEECCCC-CHHHHHHHHCCCCceEEEECCCcHH
Confidence 99999999999999999999999 899999999999998844999999999887 8889998887668999999999987
Q ss_pred HHHHHHhhhhCCEEEEEceeccccCCCCc-cccc--hHH-HHhcceeeecceecccccchHHHHHHHHHHHHcCCceeee
Q 019332 235 LDAVLLNMKIHGRIAVCGMISQYNLDRPE-GVHN--LMY-LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVE 310 (342)
Q Consensus 235 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~--~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~ 310 (342)
+..++++|+++|+++.+|..+........ .... ... ...+++++..+..........+.++++++++.+|.+++..
T Consensus 237 ~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~ 316 (345)
T cd08293 237 SDTVISQMNENSHIILCGQISQYNKDVPYPPPLPEATEAILKERNITRERFLVLNYKDKFEEAIAQLSQWVKEGKLKVKE 316 (345)
T ss_pred HHHHHHHhccCCEEEEEeeeecccCccCccccccchhHHHhhhcceEEEEEEeeccHhHHHHHHHHHHHHHHCCCcccee
Confidence 89999999999999999864321100000 0000 011 2234444433332222333356678889999999999877
Q ss_pred eeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 311 DMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 311 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
..+++++++.+|++.+.+++..||+|+++
T Consensus 317 ~~~~~l~~~~~A~~~~~~~~~~gkvvl~~ 345 (345)
T cd08293 317 TVYEGLENAGEAFQSMMNGGNIGKQIVKV 345 (345)
T ss_pred EEeecHHHHHHHHHHHhcCCCCCeEEEEC
Confidence 67779999999999999999899999874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acid |
| >TIGR03451 mycoS_dep_FDH mycothiol-dependent formaldehyde dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-45 Score=328.58 Aligned_cols=309 Identities=18% Similarity=0.223 Sum_probs=257.9
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+|||+++.++ |.| +++++ +|.| ++++++|+|||.++|+|++|++.+.|..+ ..+|.++|||++| +|++
T Consensus 1 ~mka~~~~~~--~~~----~~~~~--~~~p-~~~~~evlV~v~~~gi~~~D~~~~~g~~~-~~~p~i~G~e~~G--~V~~ 68 (358)
T TIGR03451 1 TVRGVIARSK--GAP----VELET--IVVP-DPGPGEVIVDIQACGVCHTDLHYREGGIN-DEFPFLLGHEAAG--VVEA 68 (358)
T ss_pred CcEEEEEccC--CCC----CEEEE--EECC-CCCCCeEEEEEEEEeecHHHHHHhcCCcc-ccCCcccccceEE--EEEE
Confidence 5799999998 776 57766 4445 45899999999999999999998887543 2468899999776 9999
Q ss_pred ecCCCCCCCCCCEEEe-------------------------------------------ccccceeEeecCCcceeecCC
Q 019332 86 LDSENPEFKKGDLVWG-------------------------------------------MTGWEEYSLVTAPQLFKIQHT 122 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~-------------------------------------------~g~~~~~~~v~~~~~~~i~p~ 122 (342)
+|+++++|++||+|++ .|+|+||+.++.+.++++ |+
T Consensus 69 vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~i-p~ 147 (358)
T TIGR03451 69 VGEGVTDVAPGDYVVLNWRAVCGQCRACKRGRPWYCFDTHNATQKMTLTDGTELSPALGIGAFAEKTLVHAGQCTKV-DP 147 (358)
T ss_pred eCCCCcccCCCCEEEEccCCCCCCChHHhCcCcccCcCccccccccccccCcccccccccccccceEEEehhheEEC-CC
Confidence 9999999999999975 278999999999999999 99
Q ss_pred CCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCe
Q 019332 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDE 201 (342)
Q Consensus 123 ~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~ 201 (342)
+++.. +++.+++.+.+||+++.+.++++++++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|+++
T Consensus 148 ~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~~~ak~~G~~~Vi~~~~~~~~~~~~~-~~Ga~~ 224 (358)
T TIGR03451 148 AADPA-AAGLLGCGVMAGLGAAVNTGGVKRGDSVAVIGC-GGVGDAAIAGAALAGASKIIAVDIDDRKLEWAR-EFGATH 224 (358)
T ss_pred CCChh-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCce
Confidence 85443 377888889999999877788999999999985 9999999999999999 5999999999999998 999999
Q ss_pred eEecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeee
Q 019332 202 AFNYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRME 279 (342)
Q Consensus 202 v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (342)
++++++. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... .....+...++.+++++.
T Consensus 225 ~i~~~~~-~~~~~i~~~~~~~g~d~vid~~g~~~~~~~~~~~~~~~G~iv~~G~~~~~----~~~~~~~~~~~~~~~~i~ 299 (358)
T TIGR03451 225 TVNSSGT-DPVEAIRALTGGFGADVVIDAVGRPETYKQAFYARDLAGTVVLVGVPTPD----MTLELPLLDVFGRGGALK 299 (358)
T ss_pred EEcCCCc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCC----ceeeccHHHHhhcCCEEE
Confidence 9999887 888889988877 89999999997 6889999999999999999975431 011234456677888888
Q ss_pred cceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 280 GFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+++.... ...+.++++++++.+|.+++ .+..+||++++.+|++.+++++.. |+++.
T Consensus 300 ~~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~~ 357 (358)
T TIGR03451 300 SSWYGDC--LPERDFPMLVDLYLQGRLPLDAFVTERIGLDDVEEAFDKMHAGDVL-RSVVE 357 (358)
T ss_pred EeecCCC--CcHHHHHHHHHHHHcCCCCchheEEEEecHHHHHHHHHHHhCCCcc-eeEEe
Confidence 7654321 12456888999999999975 467789999999999999988765 77664
|
Members of this protein family are mycothiol-dependent formaldehyde dehydrogenase (EC 1.2.1.66). This protein is found, so far, only in the Actinobacteria (Mycobacterium sp., Streptomyces sp., Corynebacterium sp., and related species), where mycothione replaces glutathione. |
| >cd08294 leukotriene_B4_DH_like 13-PGR is a bifunctional enzyme with delta-13 15-prostaglandin reductase and leukotriene B4 12 hydroxydehydrogenase activity | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-44 Score=323.97 Aligned_cols=320 Identities=43% Similarity=0.755 Sum_probs=258.1
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+||+|++.++.-|.+.++.+++++.+. | .++++||+|||.+++||+.|.....+ ...+|.++|+|++| +|++
T Consensus 2 ~~~~~~~~~~~~~~~~~~~l~~~~~~~--p-~~~~~evlVkv~a~~in~~~~~~~~~---~~~~p~v~G~e~~G--~V~~ 73 (329)
T cd08294 2 KAKTWVLKKHFDGKPKESDFELVEEEL--P-PLKDGEVLCEALFLSVDPYMRPYSKR---LNEGDTMIGTQVAK--VIES 73 (329)
T ss_pred CceEEEEecCCCCCCCccceEEEecCC--C-CCCCCcEEEEEEEEecCHHHhccccc---CCCCCcEecceEEE--EEec
Confidence 689999999422344446777776544 5 46999999999999999987652221 12357889999776 7763
Q ss_pred ecCCCCCCCCCCEEEeccccceeEeecCC---cceeecCCCCCc--c--chhhccCCchhhHHHhhhhhcCCCCCCEEEE
Q 019332 86 LDSENPEFKKGDLVWGMTGWEEYSLVTAP---QLFKIQHTDVPL--S--YYTGILGMPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~g~~~~~~~v~~~---~~~~i~p~~~~~--~--~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
.+++|++||+|+++++|++|+.++.+ .++++ |++++. . ...++++++++|||+++.+.+++++|++|||
T Consensus 74 ---~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-P~~~~~~~~~~~~~a~~~~~~~ta~~al~~~~~~~~g~~vlI 149 (329)
T cd08294 74 ---KNSKFPVGTIVVASFGWRTHTVSDGKDQPDLYKL-PADLPDDLPPSLALGVLGMPGLTAYFGLLEICKPKAGETVVV 149 (329)
T ss_pred ---CCCCCCCCCEEEeeCCeeeEEEECCccccceEEC-CccccccCChHHHHHhcccHHHHHHHHHHHhcCCCCCCEEEE
Confidence 55789999999999999999999999 99999 998541 1 1235788999999999988899999999999
Q ss_pred ecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHH
Q 019332 159 SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAV 238 (342)
Q Consensus 159 ~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~ 238 (342)
+|++|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++. ++.+.+++.+++++|++||++|++.+..+
T Consensus 150 ~ga~g~vG~~aiqlA~~~G~~vi~~~~s~~~~~~l~-~~Ga~~vi~~~~~-~~~~~v~~~~~~gvd~vld~~g~~~~~~~ 227 (329)
T cd08294 150 NGAAGAVGSLVGQIAKIKGCKVIGCAGSDDKVAWLK-ELGFDAVFNYKTV-SLEEALKEAAPDGIDCYFDNVGGEFSSTV 227 (329)
T ss_pred ecCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHCCCCcEEEEECCCHHHHHHH
Confidence 999999999999999999999999999999999999 8999999999887 88888888876689999999999889999
Q ss_pred HHhhhhCCEEEEEceeccccCCCCc-cccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccc
Q 019332 239 LLNMKIHGRIAVCGMISQYNLDRPE-GVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE 317 (342)
Q Consensus 239 ~~~l~~~G~~v~~g~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~ 317 (342)
+++++++|+++.+|........... ........+.+++++.++....+.....+.++++++++.+|.+++.+..+++++
T Consensus 228 ~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~l~ 307 (329)
T cd08294 228 LSHMNDFGRVAVCGSISTYNDKEPKKGPYVQETIIFKQLKMEGFIVYRWQDRWPEALKQLLKWIKEGKLKYREHVTEGFE 307 (329)
T ss_pred HHhhccCCEEEEEcchhccCCCCCCcCcccHHHHhhhcceEEEEEhhhhHHHHHHHHHHHHHHHHCCCCcCCcccccCHH
Confidence 9999999999999864332110000 112334556677887776544322334566888999999999998777778999
Q ss_pred cHHHHHHHHHcCCccceEEEEe
Q 019332 318 SAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++.+|++.+.+++..||+|+++
T Consensus 308 ~~~~A~~~~~~~~~~gkvvv~~ 329 (329)
T cd08294 308 NMPQAFIGMLKGENTGKAIVKV 329 (329)
T ss_pred HHHHHHHHHHcCCCCCeEEEeC
Confidence 9999999999999999999864
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto- 13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of ac |
| >cd08239 THR_DH_like L-threonine dehydrogenase (TDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-44 Score=323.32 Aligned_cols=302 Identities=21% Similarity=0.238 Sum_probs=250.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++..+ +.+++++ +|.| .++++||+||+.++++|++|++.+.+... ...+|.++|||++| +|++
T Consensus 1 mka~~~~~~-------~~l~~~~--~~~p-~~~~~evlV~v~~~gi~~~D~~~~~~~~~~~~~~p~i~G~e~~G--~V~~ 68 (339)
T cd08239 1 MRGAVFPGD-------RTVELRE--FPVP-VPGPGEVLLRVKASGLCGSDLHYYYHGHRAPAYQGVIPGHEPAG--VVVA 68 (339)
T ss_pred CeEEEEecC-------CceEEEe--cCCC-CCCCCeEEEEEEEEEeccccHHHHcCCCCccCCCCceeccCceE--EEEE
Confidence 588888755 2356655 5555 45899999999999999999988776532 22357899999776 9999
Q ss_pred ecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 86 LDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
+|++++.+++||+|+.. |+|++|+.++.+.++++ |++++.. +++.++
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~~g~~~~G~~ae~~~v~~~~~~~~-P~~~~~~-~aa~l~ 146 (339)
T cd08239 69 VGPGVTHFRVGDRVMVYHYVGCGACRNCRRGWMQLCTSKRAAYGWNRDGGHAEYMLVPEKTLIPL-PDDLSFA-DGALLL 146 (339)
T ss_pred ECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCcCcccccccCCCCcceeEEEechHHeEEC-CCCCCHH-Hhhhhc
Confidence 99999999999999752 78999999999999999 9984443 377888
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHH
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNE 213 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 213 (342)
+++.|||+++. ..++++|++|||+|+ |++|++++|+|+..|++ |++++++++|.++++ ++|++.++++++. + .+
T Consensus 147 ~~~~ta~~~l~-~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~G~~~vi~~~~~~~~~~~~~-~~ga~~~i~~~~~-~-~~ 221 (339)
T cd08239 147 CGIGTAYHALR-RVGVSGRDTVLVVGA-GPVGLGALMLARALGAEDVIGVDPSPERLELAK-ALGADFVINSGQD-D-VQ 221 (339)
T ss_pred chHHHHHHHHH-hcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCCcc-h-HH
Confidence 99999999994 578899999999986 99999999999999997 999999999999998 9999999999876 6 77
Q ss_pred HHHHHCCC-CccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchH
Q 019332 214 ALKRYFPE-GIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP 291 (342)
Q Consensus 214 ~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
.+++.+++ ++|++|||+|+. .+..++++++++|+++.+|...... ......++.+++++.+++... .
T Consensus 222 ~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~------~~~~~~~~~~~~~i~g~~~~~-----~ 290 (339)
T cd08239 222 EIRELTSGAGADVAIECSGNTAARRLALEAVRPWGRLVLVGEGGELT------IEVSNDLIRKQRTLIGSWYFS-----V 290 (339)
T ss_pred HHHHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcCCCCcc------cCcHHHHHhCCCEEEEEecCC-----H
Confidence 78888777 899999999994 5688999999999999999754321 112345677888888876544 4
Q ss_pred HHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 292 KFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 292 ~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+.++++++++.+|.+++ .+..+|+++++++|++.+.++. .||+|+++
T Consensus 291 ~~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~-~gKvvi~~ 339 (339)
T cd08239 291 PDMEECAEFLARHKLEVDRLVTHRFGLDQAPEAYALFAQGE-SGKVVFVF 339 (339)
T ss_pred HHHHHHHHHHHcCCCChhHeEEEEecHHHHHHHHHHHHcCC-ceEEEEeC
Confidence 67888999999999874 5677889999999999998875 69999874
|
MDR/AHD-like proteins, including a protein annotated as a threonine dehydrogenase. L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)-dependent oxidation. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent interconversion of alcohols to aldehydes or ketones. Zinc-dependent ADHs are medium chain dehydrogenase/reductase type proteins (MDRs) and have a NAD(P)(H)-binding domain in a Rossmann fold of an beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. In addition to alcohol dehydrogenases, this group includes quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and generally have 2 tightly bound zinc at |
| >KOG0025 consensus Zn2+-binding dehydrogenase (nuclear receptor binding factor-1) [Transcription; Energy production and conversion] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-44 Score=294.88 Aligned_cols=322 Identities=21% Similarity=0.267 Sum_probs=267.2
Q ss_pred CccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCccccc
Q 019332 2 PEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGY 80 (342)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~ 80 (342)
+++...|+++|.++ |.|. +.+++...++| ....++|+||.+|+.|||+|+.+++|.++. +.+|.+-|+| |+
T Consensus 15 q~~~~~kalvY~~h--gdP~-kVlql~~~~~p---~~~~s~v~Vk~LAaPINPsDIN~IQGvYpvrP~~PAVgGnE--Gv 86 (354)
T KOG0025|consen 15 QMPARSKALVYSEH--GDPA-KVLQLKNLELP---AVPGSDVLVKMLAAPINPSDINQIQGVYPVRPELPAVGGNE--GV 86 (354)
T ss_pred ccccccceeeeccc--CCch-hhheeecccCC---CCCCCceeeeeeecCCChHHhhhhccccCCCCCCCcccCCc--ce
Confidence 45567799999999 8885 77788776665 335667999999999999999999999953 4568999999 88
Q ss_pred EEEEEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEE
Q 019332 81 GVAKVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECV 156 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~v 156 (342)
|.|+.||+++++|++||.|... |+|++|.+.+++.++++ ++.+++.. ||++..+.+|||..|.+.-++++||+|
T Consensus 87 ~eVv~vGs~vkgfk~Gd~VIp~~a~lGtW~t~~v~~e~~Li~v-d~~~pl~~-AAT~~VNP~TAyrmL~dfv~L~~GD~v 164 (354)
T KOG0025|consen 87 GEVVAVGSNVKGFKPGDWVIPLSANLGTWRTEAVFSESDLIKV-DKDIPLAS-AATLSVNPCTAYRMLKDFVQLNKGDSV 164 (354)
T ss_pred EEEEEecCCcCccCCCCeEeecCCCCccceeeEeecccceEEc-CCcCChhh-hheeccCchHHHHHHHHHHhcCCCCee
Confidence 8999999999999999999866 89999999999999999 88877764 999999999999999999999999999
Q ss_pred EEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh
Q 019332 157 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG 232 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 232 (342)
+-.||.+++|++.+|+|+++|++-+.++|+....+.+++ .+|+++|+...+. .-.+..+..... ++.+.|||+|+
T Consensus 165 IQNganS~VG~~ViQlaka~GiktinvVRdR~~ieel~~~Lk~lGA~~ViTeeel-~~~~~~k~~~~~~~prLalNcVGG 243 (354)
T KOG0025|consen 165 IQNGANSGVGQAVIQLAKALGIKTINVVRDRPNIEELKKQLKSLGATEVITEEEL-RDRKMKKFKGDNPRPRLALNCVGG 243 (354)
T ss_pred eecCcccHHHHHHHHHHHHhCcceEEEeecCccHHHHHHHHHHcCCceEecHHHh-cchhhhhhhccCCCceEEEeccCc
Confidence 999999999999999999999999999988765554443 6899999865432 212222222333 78999999999
Q ss_pred hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc------ccchHHHHHHHHHHHHcCCc
Q 019332 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY------YHLYPKFLEMIIPHIKEGKI 306 (342)
Q Consensus 233 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~g~~ 306 (342)
.......+.|..||.++.+|..+.. +.......++.++++++|+++..| ++...+.+.++.+++..|++
T Consensus 244 ksa~~iar~L~~GgtmvTYGGMSkq-----Pv~~~ts~lIFKdl~~rGfWvt~W~~~~~~pe~~~~~i~~~~~l~~~G~i 318 (354)
T KOG0025|consen 244 KSATEIARYLERGGTMVTYGGMSKQ-----PVTVPTSLLIFKDLKLRGFWVTRWKKEHKSPEERKEMIDELCDLYRRGKL 318 (354)
T ss_pred hhHHHHHHHHhcCceEEEecCccCC-----CcccccchheeccceeeeeeeeehhhccCCcHHHHHHHHHHHHHHHcCee
Confidence 8888999999999999999998876 335566778899999999999887 33344678999999999999
Q ss_pred eeeeeeeeccccHHHHHHHHHcCC-ccceEEEEe
Q 019332 307 VYVEDMAEGLESAPATLIGLFSGR-NVGKQVVAV 339 (342)
Q Consensus 307 ~~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~ 339 (342)
+.+.....+|++...|++...+.. ..||.++.+
T Consensus 319 ~~~~~e~v~L~~~~tald~~L~~~~~~~Kq~i~~ 352 (354)
T KOG0025|consen 319 KAPNCEKVPLADHKTALDAALSKFGKSGKQIIVL 352 (354)
T ss_pred ccccceeeechhhhHHHHHHHHHhccCCceEEEe
Confidence 998877779999888888655443 346777765
|
|
| >cd08291 ETR_like_1 2-enoyl thioester reductase (ETR) like proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-44 Score=319.46 Aligned_cols=314 Identities=22% Similarity=0.291 Sum_probs=257.3
Q ss_pred ccEEEEecccCCCC-CCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEE
Q 019332 7 NKQVILKDYVSGFP-KETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 7 ~~a~~~~~~~~g~p-~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~ 84 (342)
|||+++.++ |.| ..+.+++. ++|.| .++++||+||+.++++|++|++.+.|.++ ...+|.++|||++| +|+
T Consensus 1 m~a~~~~~~--~~~~~~~~~~~~--~~~~p-~~~~~evlv~v~~~gi~~~d~~~~~g~~~~~~~~p~v~G~e~~G--~V~ 73 (324)
T cd08291 1 MKALLLEEY--GKPLEVKELSLP--EPEVP-EPGPGEVLIKVEAAPINPSDLGFLKGQYGSTKALPVPPGFEGSG--TVV 73 (324)
T ss_pred CeEEEEeec--CCCccccEEEec--ccCCC-CCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCcCCCcceEE--EEE
Confidence 589999988 755 11234554 45666 45899999999999999999998887653 23457899999776 999
Q ss_pred EecCCCCC-CCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 85 VLDSENPE-FKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 85 ~vG~~v~~-~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
++|+++++ |++||+|+++ |+|++|+.++.+.++++ |+++++. +++++++.++|||.++ ...+. ++++++|+
T Consensus 74 ~vG~~v~~~~~vGd~V~~~~~~~g~~a~~~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~-~~~~~-~~~~vlv~ 149 (324)
T cd08291 74 AAGGGPLAQSLIGKRVAFLAGSYGTYAEYAVADAQQCLPL-PDGVSFE-QGASSFVNPLTALGML-ETARE-EGAKAVVH 149 (324)
T ss_pred EECCCccccCCCCCEEEecCCCCCcchheeeecHHHeEEC-CCCCCHH-HHhhhcccHHHHHHHH-Hhhcc-CCCcEEEE
Confidence 99999996 9999999986 89999999999999999 9985444 3677788889997555 44555 55566666
Q ss_pred -cCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHH
Q 019332 160 -AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDA 237 (342)
Q Consensus 160 -ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~ 237 (342)
+++|++|++++|+|+..|++|+++++++++.+.++ ++|++++++++.. ++.+.+++.+.+ ++|++|||+|+.....
T Consensus 150 ~~g~g~vG~~a~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~~d~vid~~g~~~~~~ 227 (324)
T cd08291 150 TAAASALGRMLVRLCKADGIKVINIVRRKEQVDLLK-KIGAEYVLNSSDP-DFLEDLKELIAKLNATIFFDAVGGGLTGQ 227 (324)
T ss_pred ccCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-cHHHHHHHHhCCCCCcEEEECCCcHHHHH
Confidence 78899999999999999999999999999999999 8999999999887 888999998877 8999999999988888
Q ss_pred HHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc-cchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
.+++++++|+++.+|.....+. ...+...++.+++++.++....+. ....+.++++++++. +.+++.+..+|+|
T Consensus 228 ~~~~l~~~G~~v~~g~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~i~~~~~l 302 (324)
T cd08291 228 ILLAMPYGSTLYVYGYLSGKLD----EPIDPVDLIFKNKSIEGFWLTTWLQKLGPEVVKKLKKLVK-TELKTTFASRYPL 302 (324)
T ss_pred HHHhhCCCCEEEEEEecCCCCc----ccCCHHHHhhcCcEEEEEEHHHhhcccCHHHHHHHHHHHh-CccccceeeEEcH
Confidence 9999999999999987544211 113345567788998887765542 223567888889888 8999989999999
Q ss_pred ccHHHHHHHHHcCCccceEEEE
Q 019332 317 ESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+++.+|++.+.+++..||+++.
T Consensus 303 ~~~~~a~~~~~~~~~~Gkvv~~ 324 (324)
T cd08291 303 ALTLEAIAFYSKNMSTGKKLLI 324 (324)
T ss_pred HHHHHHHHHHHhCCCCCeEEeC
Confidence 9999999999999999999873
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordin |
| >PLN02740 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-44 Score=324.79 Aligned_cols=312 Identities=20% Similarity=0.239 Sum_probs=254.4
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGV 82 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~ 82 (342)
+++|||+++.++ +.+ +.+++ +|.| +++++||+|||.++|+|++|++.+.|... ...+|.++|||++| +
T Consensus 8 ~~~mka~~~~~~--~~~----~~~~e--~~~P-~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~~p~i~GhE~~G--~ 76 (381)
T PLN02740 8 VITCKAAVAWGP--GEP----LVMEE--IRVD-PPQKMEVRIKILYTSICHTDLSAWKGENEAQRAYPRILGHEAAG--I 76 (381)
T ss_pred ceeeEEEEEecC--CCC----cEEEE--eeCC-CCCCCeEEEEEEEEecChhhHHHhCCCCcccCCCCccccccceE--E
Confidence 468999999887 644 56665 5555 45899999999999999999999888652 23468999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEe------------------------------------------------------cccccee
Q 019332 83 AKVLDSENPEFKKGDLVWG------------------------------------------------------MTGWEEY 108 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~------------------------------------------------------~g~~~~~ 108 (342)
|+++|++++++++||+|++ .|+|+||
T Consensus 77 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~G~~aey 156 (381)
T PLN02740 77 VESVGEGVEDLKAGDHVIPIFNGECGDCRYCKRDKTNLCETYRVDPFKSVMVNDGKTRFSTKGDGQPIYHFLNTSTFTEY 156 (381)
T ss_pred EEEeCCCCCcCCCCCEEEecCCCCCCCChhhcCCCcccccCccccccccccccCCCcccccccCCCcccccccCccceeE
Confidence 9999999999999999985 2689999
Q ss_pred EeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh
Q 019332 109 SLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 187 (342)
Q Consensus 109 ~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~ 187 (342)
+.++.+.++++ |++++.. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++
T Consensus 157 ~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G~-G~vG~~a~q~ak~~G~~~Vi~~~~~~ 233 (381)
T PLN02740 157 TVLDSACVVKI-DPNAPLK-KMSLLSCGVSTGVGAAWNTANVQAGSSVAIFGL-GAVGLAVAEGARARGASKIIGVDINP 233 (381)
T ss_pred EEEehHHeEEC-CCCCCHH-HhhhhcccchhhHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHCCCCcEEEEcCCh
Confidence 99999999999 9985444 377888899999999877789999999999996 9999999999999999 799999999
Q ss_pred hhHHHHHHHcCCCeeEecCCc-hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCcc
Q 019332 188 DKIDLLKNKFGFDEAFNYKEE-PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEG 264 (342)
Q Consensus 188 ~~~~~~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~ 264 (342)
+|++.++ ++|++.++++++. .++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|...... ..
T Consensus 234 ~r~~~a~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~dvvid~~G~~~~~~~a~~~~~~g~G~~v~~G~~~~~~----~~ 308 (381)
T PLN02740 234 EKFEKGK-EMGITDFINPKDSDKPVHERIREMTGGGVDYSFECAGNVEVLREAFLSTHDGWGLTVLLGIHPTPK----ML 308 (381)
T ss_pred HHHHHHH-HcCCcEEEecccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhhcCCCEEEEEccCCCCc----ee
Confidence 9999998 9999989988753 147788888876689999999998 7889999999996 9999999754310 11
Q ss_pred ccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 265 VHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
......+ .++.++.++....+.. ...+.++++++.++.+++ .++.+|+|+|+++|++.+.+++. .|++|+
T Consensus 309 ~~~~~~~-~~~~~i~g~~~~~~~~--~~~~~~~~~~~~~g~i~~~~~it~~~~l~e~~~A~~~~~~~~~-~k~~~~ 380 (381)
T PLN02740 309 PLHPMEL-FDGRSITGSVFGDFKG--KSQLPNLAKQCMQGVVNLDGFITHELPFEKINEAFQLLEDGKA-LRCLLH 380 (381)
T ss_pred cccHHHH-hcCCeEEEEecCCCCc--HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHHCCCc-eeEEEe
Confidence 1122222 3577887766544321 346788999999998865 47778999999999999988865 498886
|
|
| >PLN02586 probable cinnamyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-44 Score=322.09 Aligned_cols=303 Identities=18% Similarity=0.197 Sum_probs=242.9
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
+++++|.+.+. +++ +++. ++|.| .++++||+|||.++|+|++|++.+.|.++...+|.++|||++| +|+
T Consensus 11 ~~~~~~~~~~~--~~~----l~~~--~~~~p-~~~~~eVlV~v~~~gic~sD~~~~~g~~~~~~~p~i~GhE~~G--~V~ 79 (360)
T PLN02586 11 QKAFGWAARDP--SGV----LSPF--HFSRR-ENGDEDVTVKILYCGVCHSDLHTIKNEWGFTRYPIVPGHEIVG--IVT 79 (360)
T ss_pred hheeEEEecCC--CCC----ceEE--eecCC-CCCCCeEEEEEEEecCChhhHhhhcCCcCCCCCCccCCcceeE--EEE
Confidence 45555555444 322 4554 45656 4589999999999999999999888755434568999999777 999
Q ss_pred EecCCCCCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecCCCCCc
Q 019332 85 VLDSENPEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQHTDVPL 126 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~ 126 (342)
++|++|++|++||+|+. .|+|+||+.++.+.++++ |+++++
T Consensus 80 ~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~ls~ 158 (360)
T PLN02586 80 KLGKNVKKFKEGDRVGVGVIVGSCKSCESCDQDLENYCPKMIFTYNSIGHDGTKNYGGYSDMIVVDQHFVLRF-PDNLPL 158 (360)
T ss_pred EECCCCCccCCCCEEEEccccCcCCCCccccCCCcccCCCccccccccccCCCcCCCccceEEEEchHHeeeC-CCCCCH
Confidence 99999999999999973 278999999999999999 999544
Q ss_pred cchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHcCCCeeEec
Q 019332 127 SYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID-LLKNKFGFDEAFNY 205 (342)
Q Consensus 127 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~-~~~~~~g~~~v~~~ 205 (342)
. +++.+++.+.|||+++.....+++|++|||.|+ |++|++++|+|+..|++|++++.+++++. .++ ++|++.++++
T Consensus 159 ~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~vi~~~~~~~~~~~~~~-~~Ga~~vi~~ 235 (360)
T PLN02586 159 D-AGAPLLCAGITVYSPMKYYGMTEPGKHLGVAGL-GGLGHVAVKIGKAFGLKVTVISSSSNKEDEAIN-RLGADSFLVS 235 (360)
T ss_pred H-HhhhhhcchHHHHHHHHHhcccCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCcchhhhHHH-hCCCcEEEcC
Confidence 4 377889999999999976667789999999886 99999999999999999998887776654 445 8999988887
Q ss_pred CCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 206 KEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
++. +.+++.++ ++|++||++|. ..+..++++++++|+++.+|..... ...+...++.++..+.++...
T Consensus 236 ~~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~vG~~~~~------~~~~~~~~~~~~~~i~g~~~~ 304 (360)
T PLN02586 236 TDP----EKMKAAIG-TMDYIIDTVSAVHALGPLLGLLKVNGKLITLGLPEKP------LELPIFPLVLGRKLVGGSDIG 304 (360)
T ss_pred CCH----HHHHhhcC-CCCEEEECCCCHHHHHHHHHHhcCCcEEEEeCCCCCC------CccCHHHHHhCCeEEEEcCcC
Confidence 653 24555444 69999999998 6788999999999999999864321 123445556677777666544
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
. .+.++++++++.+|.+++.+ .+|+|+|+++|++.+.+++..||+|+.+
T Consensus 305 ~-----~~~~~~~~~li~~g~i~~~~-~~~~l~~~~~A~~~~~~~~~~gkvvi~~ 353 (360)
T PLN02586 305 G-----IKETQEMLDFCAKHNITADI-ELIRMDEINTAMERLAKSDVRYRFVIDV 353 (360)
T ss_pred C-----HHHHHHHHHHHHhCCCCCcE-EEEeHHHHHHHHHHHHcCCCcEEEEEEc
Confidence 3 45688999999999999876 4789999999999999998889999986
|
|
| >PRK09880 L-idonate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-43 Score=319.62 Aligned_cols=299 Identities=19% Similarity=0.201 Sum_probs=242.5
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCccccccccc-CCC--CccccCCCCCcccccE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN-IKG--SYVESFKPGMPISGYG 81 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~-~~~--~~~~p~~~G~e~~G~g 81 (342)
.++++.+++.+ +++++++ .|.| + .++||||||.++|||++|++.+.+ ..+ ...+|.++|||++|
T Consensus 3 ~~~~~~~~~~~-------~~~~~~~--~~~p-~-~~~evlVkv~a~gic~sD~~~~~~g~~~~~~~~~p~v~GhE~~G-- 69 (343)
T PRK09880 3 VKTQSCVVAGK-------KDVAVTE--QEIE-W-NNNGTLVQITRGGICGSDLHYYQEGKVGNFVIKAPMVLGHEVIG-- 69 (343)
T ss_pred ccceEEEEecC-------CceEEEe--cCCC-C-CCCeEEEEEEEEEECccccHhhccCCcccccccCCcccCcccEE--
Confidence 46788888866 3346665 4444 4 789999999999999999988753 222 23568999999776
Q ss_pred EEEEecCCCCCCCCCCEEEe-----------------------------------ccccceeEeecCCcceeecCCCCCc
Q 019332 82 VAKVLDSENPEFKKGDLVWG-----------------------------------MTGWEEYSLVTAPQLFKIQHTDVPL 126 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~-----------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~ 126 (342)
+|+++ ++++|++||+|+. .|+|+||++++++.++++ |++ +
T Consensus 70 ~V~~v--~v~~~~vGdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~~~~~~G~~aey~~v~~~~~~~~-P~~--l 144 (343)
T PRK09880 70 KIVHS--DSSGLKEGQTVAINPSKPCGHCKYCLSHNENQCTTMRFFGSAMYFPHVDGGFTRYKVVDTAQCIPY-PEK--A 144 (343)
T ss_pred EEEEe--cCccCCCCCEEEECCCCCCcCChhhcCCChhhCCCcceeecccccCCCCCceeeeEEechHHeEEC-CCC--C
Confidence 99999 7889999999973 278999999999999999 999 4
Q ss_pred cchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEec
Q 019332 127 SYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNY 205 (342)
Q Consensus 127 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~ 205 (342)
+++.+++..++++||+++.+ ....++++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|++.++++
T Consensus 145 ~~~~aa~~~~~~~a~~al~~-~~~~~g~~VlV~G~-G~vG~~aiqlak~~G~~~Vi~~~~~~~~~~~a~-~lGa~~vi~~ 221 (343)
T PRK09880 145 DEKVMAFAEPLAVAIHAAHQ-AGDLQGKRVFVSGV-GPIGCLIVAAVKTLGAAEIVCADVSPRSLSLAR-EMGADKLVNP 221 (343)
T ss_pred CHHHHHhhcHHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEEeCCHHHHHHHH-HcCCcEEecC
Confidence 44455677788999999955 45668999999996 9999999999999999 7999999999999999 8999999998
Q ss_pred CCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 206 KEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
++. ++.+.. +. .+++|++|||+|+ ..+..++++++++|+++.+|.... ........++.+++++.++...
T Consensus 222 ~~~-~~~~~~-~~-~g~~D~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~ 292 (343)
T PRK09880 222 QND-DLDHYK-AE-KGYFDVSFEVSGHPSSINTCLEVTRAKGVMVQVGMGGA------PPEFPMMTLIVKEISLKGSFRF 292 (343)
T ss_pred Ccc-cHHHHh-cc-CCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCC------CCccCHHHHHhCCcEEEEEeec
Confidence 876 654322 22 2369999999998 678899999999999999997432 1233456677888888876532
Q ss_pred ccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+.++++++++.+|.+++ .+..+|+|+++++|++.+.+++..||+++.+
T Consensus 293 ------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 343 (343)
T PRK09880 293 ------TEEFNTAVSWLANGVINPLPLLSAEYPFTDLEEALIFAGDKTQAAKVQLVF 343 (343)
T ss_pred ------cccHHHHHHHHHcCCCCchhheEEEEEHHHHHHHHHHHhcCCCceEEEEeC
Confidence 345788999999999986 4667889999999999999888789999864
|
|
| >TIGR02825 B4_12hDH leukotriene B4 12-hydroxydehydrogenase/15-oxo-prostaglandin 13-reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=316.04 Aligned_cols=317 Identities=41% Similarity=0.699 Sum_probs=251.6
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEec
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG 87 (342)
|.|++.+...+.|.++.+++.+. |.| +++++||||||.|+|+|+.++... ......|.++|+|++| +|+++|
T Consensus 2 ~~~~~~~~~~~~~~~~~l~~~~~--~~p-~~~~~evlv~v~a~~~n~~~~~g~---~~~~~~~~i~G~~~~g--~v~~~~ 73 (325)
T TIGR02825 2 KTWTLKKHFVGYPTDSDFELKTV--ELP-PLNNGEVLLEALFLSVDPYMRVAA---KRLKEGDTMMGQQVAR--VVESKN 73 (325)
T ss_pred cEEEEecCCCCCCCCCceEEEec--cCC-CCCCCcEEEEEEEEecCHHHhccc---CcCCCCCcEecceEEE--EEEeCC
Confidence 56777776667788888888764 555 458999999999999999766432 2222346899999776 898876
Q ss_pred CCCCCCCCCCEEEeccccceeEeecCCcceeec---CCCCCccch-h-hccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 88 SENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQ---HTDVPLSYY-T-GILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 88 ~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~---p~~~~~~~~-~-a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
+ .|++||+|+++++|++|+.++.+.+.+++ |++ ++++ + ++++++++|||+++.+.+++++|++|||+|++
T Consensus 74 ~---~~~~GdrV~~~~~~~~~~~~~~~~~~~l~~~~p~~--~~~~~aaa~l~~~~~TA~~~l~~~~~~~~g~~VLI~ga~ 148 (325)
T TIGR02825 74 V---ALPKGTIVLASPGWTSHSISDGKDLEKLLTEWPDT--LPLSLALGTVGMPGLTAYFGLLEICGVKGGETVMVNAAA 148 (325)
T ss_pred C---CCCCCCEEEEecCceeeEEechhheEEccccccCC--CCHHHHHHhcccHHHHHHHHHHHHhCCCCCCEEEEeCCc
Confidence 3 69999999999999999999988866551 566 4443 4 67899999999999888999999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l 242 (342)
|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++..++.+.++..+++++|++|||+|+..+..+++++
T Consensus 149 g~vG~~aiqlAk~~G~~Vi~~~~s~~~~~~~~-~lGa~~vi~~~~~~~~~~~~~~~~~~gvdvv~d~~G~~~~~~~~~~l 227 (325)
T TIGR02825 149 GAVGSVVGQIAKLKGCKVVGAAGSDEKVAYLK-KLGFDVAFNYKTVKSLEETLKKASPDGYDCYFDNVGGEFSNTVIGQM 227 (325)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeccccccHHHHHHHhCCCCeEEEEECCCHHHHHHHHHHh
Confidence 99999999999999999999999999999998 89999999988631566666666655899999999998889999999
Q ss_pred hhCCEEEEEceeccccCCCC-ccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeeccccHH
Q 019332 243 KIHGRIAVCGMISQYNLDRP-EGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAP 320 (342)
Q Consensus 243 ~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 320 (342)
+++|+++.+|.......... .........+.+++++.++....+ .+...+.++++++++.+|.+++.+..+|+++++.
T Consensus 228 ~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~~~ 307 (325)
T TIGR02825 228 KKFGRIAICGAISTYNRTGPLPPGPPPEIVIYQELRMEGFIVNRWQGEVRQKALKELLKWVLEGKIQYKEYVIEGFENMP 307 (325)
T ss_pred CcCcEEEEecchhhcccCCCCCCCcchHHHhhhcceEeEEEehhhhhhhhHHHHHHHHHHHHCCCcccceeccccHHHHH
Confidence 99999999987543210000 111123345556777776654332 2223457889999999999998877889999999
Q ss_pred HHHHHHHcCCccceEEEE
Q 019332 321 ATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 321 ~a~~~~~~~~~~gkvvv~ 338 (342)
+|++.+++++..||+|++
T Consensus 308 ~A~~~~~~~~~~gkvVv~ 325 (325)
T TIGR02825 308 AAFMGMLKGENLGKTIVK 325 (325)
T ss_pred HHHHHHhcCCCCCeEEeC
Confidence 999999999999999973
|
Leukotriene B4 12-hydroxydehydrogenase is an NADP-dependent enzyme of arachidonic acid metabolism, responsible for converting leukotriene B4 to the much less active metabolite 12-oxo-leukotriene B4. The BRENDA database lists leukotriene B4 12-hydroxydehydrogenase as one of the synonyms of 2-alkenal reductase (EC 1.3.1.74), while 1.3.1.48 is 15-oxoprostaglandin 13-reductase. |
| >KOG1196 consensus Predicted NAD-dependent oxidoreductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-43 Score=290.51 Aligned_cols=338 Identities=71% Similarity=1.245 Sum_probs=302.4
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v 83 (342)
.+.++|++..++.|.|...++.+...++..+.++++++|+||.+|-+++|.-+..+...-+ ....|+.||..+.|.|+.
T Consensus 2 v~nkqvvLk~y~~g~P~~~d~~~~~~~~el~~~~~s~~vlvknlYLS~DPymR~rM~~~~~~~y~~~~~~G~pi~g~GV~ 81 (343)
T KOG1196|consen 2 VTNKQVILKNYVTGFPTESDFEFTTTTVELRVPLGSGEVLVKNLYLSCDPYMRIRMGKPDPSDYAPPYEPGKPIDGFGVA 81 (343)
T ss_pred ccccEEEEeccCCCCCccccceeeeeeecccCCCCCccEEeEeeeecCCHHHHhhccCCCcccccCcccCCcEecCCceE
Confidence 4678999999888999989999988887767788999999999999999987655444323 256688999999998898
Q ss_pred EEecCCCCCCCCCCEEEeccccceeEeecCCc--ceeec-CCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 84 KVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ--LFKIQ-HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~--~~~i~-p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
..+.++-+++++||.|+++-+|.+|.+++... .++++ |.+.++++....+..+++|||..+++.+..++|++|+|.|
T Consensus 82 kVi~S~~~~~~~GD~v~g~~gWeeysii~~~~~~~~ki~~~~~~pLs~ylg~lGm~glTAy~Gf~ei~~pk~geTv~VSa 161 (343)
T KOG1196|consen 82 KVIDSGHPNYKKGDLVWGIVGWEEYSVITPNDLEHFKIQHPTDVPLSYYLGLLGMPGLTAYAGFYEICSPKKGETVFVSA 161 (343)
T ss_pred EEEecCCCCCCcCceEEEeccceEEEEecCcchhcccCCCCCccCHhhhhhccCCchhHHHHHHHHhcCCCCCCEEEEee
Confidence 88999999999999999999999999998765 45552 4566788768899999999999999999999999999999
Q ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHH
Q 019332 161 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240 (342)
Q Consensus 161 a~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~ 240 (342)
|+|++|+.+.|+|+..|++|++++.|++|.+++++++|.+..+||+++.++.+.+++..++|+|+.||.+|+..++..+.
T Consensus 162 AsGAvGql~GQ~Ak~~Gc~VVGsaGS~EKv~ll~~~~G~d~afNYK~e~~~~~aL~r~~P~GIDiYfeNVGG~~lDavl~ 241 (343)
T KOG1196|consen 162 ASGAVGQLVGQFAKLMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLSAALKRCFPEGIDIYFENVGGKMLDAVLL 241 (343)
T ss_pred ccchhHHHHHHHHHhcCCEEEEecCChhhhhhhHhccCCccceeccCccCHHHHHHHhCCCcceEEEeccCcHHHHHHHH
Confidence 99999999999999999999999999999999998899999999998768889999988889999999999999999999
Q ss_pred hhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHH
Q 019332 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAP 320 (342)
Q Consensus 241 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 320 (342)
.|+..||++.+|..+..+...+.........+.+++++.++...++...+.+.++.+.+++++|+++...+..-.|+..+
T Consensus 242 nM~~~gri~~CG~ISqYN~~~~~~~~~l~~ii~Kr~~iqgflv~d~~d~~~k~ld~l~~~ikegKI~y~edi~~Glen~P 321 (343)
T KOG1196|consen 242 NMNLHGRIAVCGMISQYNLENPEGLHNLSTIIYKRIRIQGFLVSDYLDKYPKFLDFLLPYIKEGKITYVEDIADGLENGP 321 (343)
T ss_pred hhhhccceEeeeeehhccccCCccccchhhheeeeEEeeeEEeechhhhhHHHHHHHHHHHhcCceEEehhHHHHHhccH
Confidence 99999999999999988887776666778889999999998888888888999999999999999999888877999999
Q ss_pred HHHHHHHcCCccceEEEEecCC
Q 019332 321 ATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 321 ~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
+||.-|.+|+..||.++++..|
T Consensus 322 ~A~vglf~GkNvGKqiv~va~E 343 (343)
T KOG1196|consen 322 SALVGLFHGKNVGKQLVKVARE 343 (343)
T ss_pred HHHHHHhccCcccceEEEeecC
Confidence 9999999999999999998654
|
|
| >cd08301 alcohol_DH_plants Plant alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.7e-43 Score=320.48 Aligned_cols=309 Identities=20% Similarity=0.223 Sum_probs=253.1
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+|||+++.++ +++ +++++.++| +++++||+|||.++++|++|++.+.|..+...+|.++|||++| +|++
T Consensus 2 ~~ka~~~~~~--~~~----~~l~~~~~p---~~~~~evlIkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G--~V~~ 70 (369)
T cd08301 2 TCKAAVAWEA--GKP----LVIEEVEVA---PPQAMEVRIKILHTSLCHTDVYFWEAKGQTPLFPRILGHEAAG--IVES 70 (369)
T ss_pred ccEEEEEecC--CCC----cEEEEeeCC---CCCCCeEEEEEEEEeeCchhHHHhcCCCCCCCCCcccccccce--EEEE
Confidence 6799999887 655 577665554 5589999999999999999999888865445668999999666 9999
Q ss_pred ecCCCCCCCCCCEEEec----------------------------------------------------cccceeEeecC
Q 019332 86 LDSENPEFKKGDLVWGM----------------------------------------------------TGWEEYSLVTA 113 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~~~v~~ 113 (342)
+|+++++|++||+|+++ |+|+||+.++.
T Consensus 71 vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~~g~~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~ 150 (369)
T cd08301 71 VGEGVTDLKPGDHVLPVFTGECKECRHCKSEKSNMCDLLRINTDRGVMINDGKSRFSINGKPIYHFVGTSTFSEYTVVHV 150 (369)
T ss_pred eCCCCCccccCCEEEEccCCCCCCCchhcCCCcccCcCcccccccccccCCCccccccCCcceeeeeccccceeEEEEec
Confidence 99999999999999863 57999999999
Q ss_pred CcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHH
Q 019332 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDL 192 (342)
Q Consensus 114 ~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~ 192 (342)
..++++ |+++++. +++.+++.+.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++.++
T Consensus 151 ~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G~-g~vG~~a~q~ak~~G~~~vi~~~~~~~~~~~ 227 (369)
T cd08301 151 GCVAKI-NPEAPLD-KVCLLSCGVSTGLGAAWNVAKVKKGSTVAIFGL-GAVGLAVAEGARIRGASRIIGVDLNPSKFEQ 227 (369)
T ss_pred ccEEEC-CCCCCHH-HhhhhcchhhHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 999999 9985443 377888889999999877789999999999985 9999999999999999 89999999999999
Q ss_pred HHHHcCCCeeEecCCc-hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchH
Q 019332 193 LKNKFGFDEAFNYKEE-PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 193 ~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
++ ++|++.++++.+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...... .......
T Consensus 228 ~~-~~Ga~~~i~~~~~~~~~~~~v~~~~~~~~d~vid~~G~~~~~~~~~~~~~~~~g~~v~~g~~~~~~----~~~~~~~ 302 (369)
T cd08301 228 AK-KFGVTEFVNPKDHDKPVQEVIAEMTGGGVDYSFECTGNIDAMISAFECVHDGWGVTVLLGVPHKDA----VFSTHPM 302 (369)
T ss_pred HH-HcCCceEEcccccchhHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhhcCCCEEEEECcCCCCc----ccccCHH
Confidence 98 9999988888752 157777888776689999999997 5788999999996 9999999865310 1112222
Q ss_pred HHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 270 YLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
.+ .+++++.++....+. .+..++++++++.++.++. .+..+|+|+++++|++.+.+++.. |+++
T Consensus 303 ~~-~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~~-k~~~ 368 (369)
T cd08301 303 NL-LNGRTLKGTLFGGYK--PKTDLPNLVEKYMKKELELEKFITHELPFSEINKAFDLLLKGECL-RCIL 368 (369)
T ss_pred HH-hcCCeEEEEecCCCC--hHHHHHHHHHHHHcCCCCcHHheeeeecHHHHHHHHHHHHCCCce-eEEe
Confidence 23 357888886554321 2456888999999998865 367788999999999999998764 8876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ in the |
| >TIGR02822 adh_fam_2 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-43 Score=315.65 Aligned_cols=296 Identities=16% Similarity=0.095 Sum_probs=243.8
Q ss_pred EEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEecC
Q 019332 9 QVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLDS 88 (342)
Q Consensus 9 a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG~ 88 (342)
||.+.++ |.|....+++++ +|.| .++++||+|||.++|+|++|++.+.|..+...+|.++|||++| +|+++|+
T Consensus 1 ~~~~~~~--g~~~~~~l~~~~--~p~P-~~~~~evlVkv~~~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G--~V~~vG~ 73 (329)
T TIGR02822 1 AWEVERP--GPIEDGPLRFVE--RPVP-RPGPGELLVRVRACGVCRTDLHVSEGDLPVHRPRVTPGHEVVG--EVAGRGA 73 (329)
T ss_pred CeeeecC--CcCCCCCceEEe--CCCC-CCCCCeEEEEEEEEeecchhHHHHcCCCCCCCCCccCCcceEE--EEEEECC
Confidence 4667777 776445677765 5555 4589999999999999999999988865433457899999776 9999999
Q ss_pred CCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCCch
Q 019332 89 ENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPG 137 (342)
Q Consensus 89 ~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~ 137 (342)
+++++++||+|+. .|+|+||+.++.+.++++ |+++++. +++.+++++
T Consensus 74 ~v~~~~~Gd~V~~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~~~~~-~aa~l~~~~ 151 (329)
T TIGR02822 74 DAGGFAVGDRVGIAWLRRTCGVCRYCRRGAENLCPASRYTGWDTDGGYAEYTTVPAAFAYRL-PTGYDDV-ELAPLLCAG 151 (329)
T ss_pred CCcccCCCCEEEEcCccCcCCCChHHhCcCcccCCCcccCCcccCCcceeEEEeccccEEEC-CCCCCHH-HhHHHhccc
Confidence 9999999999973 278999999999999999 9995444 377889999
Q ss_pred hhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHH
Q 019332 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKR 217 (342)
Q Consensus 138 ~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~ 217 (342)
.|||+++. .+++++|++|||+|+ |++|++++|+|+..|++|++++++++|+++++ ++|+++++++.+. .
T Consensus 152 ~ta~~~~~-~~~~~~g~~VlV~G~-g~iG~~a~~~a~~~G~~vi~~~~~~~~~~~a~-~~Ga~~vi~~~~~-~------- 220 (329)
T TIGR02822 152 IIGYRALL-RASLPPGGRLGLYGF-GGSAHLTAQVALAQGATVHVMTRGAAARRLAL-ALGAASAGGAYDT-P------- 220 (329)
T ss_pred hHHHHHHH-hcCCCCCCEEEEEcC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HhCCceecccccc-C-------
Confidence 99999995 578999999999997 99999999999999999999999999999999 9999998875432 1
Q ss_pred HCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHH
Q 019332 218 YFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEM 296 (342)
Q Consensus 218 ~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
.+++|+++++.+. ..+..++++++++|+++.+|...+. ........++.+++++.+..... ++.+.+
T Consensus 221 --~~~~d~~i~~~~~~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~ 288 (329)
T TIGR02822 221 --PEPLDAAILFAPAGGLVPPALEALDRGGVLAVAGIHLTD-----TPPLNYQRHLFYERQIRSVTSNT-----RADARE 288 (329)
T ss_pred --cccceEEEECCCcHHHHHHHHHhhCCCcEEEEEeccCcc-----CCCCCHHHHhhCCcEEEEeecCC-----HHHHHH
Confidence 1258988988876 7889999999999999999974332 11234445667788887765433 456788
Q ss_pred HHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 297 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
+++++.+|.+++ ++.+|+|+++++|++.+.+++..||+|+
T Consensus 289 ~~~l~~~g~i~~-i~~~~~l~~~~~A~~~~~~~~~~Gkvvl 328 (329)
T TIGR02822 289 FLELAAQHGVRV-TTHTYPLSEADRALRDLKAGRFDGAAVL 328 (329)
T ss_pred HHHHHHhCCCee-EEEEEeHHHHHHHHHHHHcCCCceEEEe
Confidence 899999999985 4678899999999999999999999987
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). The gene neighborhood of members of this family is not conserved and it appears that no members are characterized. The sequence of the family includes 6 invariant cysteine residues and one invariant histidine. It appears that no member is characterized. |
| >PLN02827 Alcohol dehydrogenase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-43 Score=319.45 Aligned_cols=310 Identities=20% Similarity=0.227 Sum_probs=253.6
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
..|||+++.+. +.. +++++ +|.| .++++||+|||.++|+|++|++.+.+. ..+|.++|||++| +|+
T Consensus 11 ~~mka~~~~~~--~~~----~~~~e--~~~P-~~~~~eVlVkv~~~gic~sD~~~~~g~---~~~p~i~GhE~~G--~V~ 76 (378)
T PLN02827 11 ITCRAAVAWGA--GEA----LVMEE--VEVS-PPQPLEIRIKVVSTSLCRSDLSAWESQ---ALFPRIFGHEASG--IVE 76 (378)
T ss_pred ceeEEEEEecC--CCC----ceEEE--eecC-CCCCCEEEEEEEEEecChhHHHHhcCC---CCCCeeecccceE--EEE
Confidence 46899999866 332 56665 4445 458999999999999999999887763 2457899999776 999
Q ss_pred EecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeecC
Q 019332 85 VLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVTA 113 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~~ 113 (342)
++|+++++|++||+|++. |+|+||+.++.
T Consensus 77 ~vG~~v~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~G~~aeyv~v~~ 156 (378)
T PLN02827 77 SIGEGVTEFEKGDHVLTVFTGECGSCRHCISGKSNMCQVLGLERKGVMHSDQKTRFSIKGKPVYHYCAVSSFSEYTVVHS 156 (378)
T ss_pred EcCCCCcccCCCCEEEEecCCCCCCChhhhCcCcccccCccccccccccCCCcccccccCcccccccccccceeeEEech
Confidence 999999999999999863 68999999999
Q ss_pred CcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHH
Q 019332 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDL 192 (342)
Q Consensus 114 ~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~ 192 (342)
+.++++ |++++.. +++.+.+.+.++++++.+.+++++|++|||+|+ |++|++++|+|+..|+ .|++++++++|.++
T Consensus 157 ~~~~~i-P~~l~~~-~aa~l~~~~~~a~~~~~~~~~~~~g~~VlV~G~-G~vG~~~iqlak~~G~~~vi~~~~~~~~~~~ 233 (378)
T PLN02827 157 GCAVKV-DPLAPLH-KICLLSCGVAAGLGAAWNVADVSKGSSVVIFGL-GTVGLSVAQGAKLRGASQIIGVDINPEKAEK 233 (378)
T ss_pred hheEEC-CCCCCHH-HhhhhcchhHhhHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHH
Confidence 999999 9995443 377778888899988767788999999999986 9999999999999999 58888889999999
Q ss_pred HHHHcCCCeeEecCCc-hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchH
Q 019332 193 LKNKFGFDEAFNYKEE-PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 193 ~~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
++ ++|++.++++++. .++.+.+++.+++++|++|||+|. ..+..++++++++ |+++.+|..... .......
T Consensus 234 a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~l~~l~~g~G~iv~~G~~~~~-----~~~~~~~ 307 (378)
T PLN02827 234 AK-TFGVTDFINPNDLSEPIQQVIKRMTGGGADYSFECVGDTGIATTALQSCSDGWGLTVTLGVPKAK-----PEVSAHY 307 (378)
T ss_pred HH-HcCCcEEEcccccchHHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhhccCCCEEEEECCcCCC-----ccccccH
Confidence 98 9999989988751 167778888776689999999998 5789999999998 999999975431 1111223
Q ss_pred HHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 270 YLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.++.+++++.|+....+. ....+..+++++.+|.+++ .++.+|+|+++.+|++.+.+++. +|+||.+.
T Consensus 308 ~~~~~~~~i~g~~~~~~~--~~~~~~~~~~~~~~g~i~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~vi~~~ 377 (378)
T PLN02827 308 GLFLSGRTLKGSLFGGWK--PKSDLPSLVDKYMNKEIMIDEFITHNLSFDEINKAFELMREGKC-LRCVIHMP 377 (378)
T ss_pred HHHhcCceEEeeecCCCc--hhhhHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHCCCc-eEEEEEec
Confidence 466788998887654432 1346788999999999998 67888999999999999998876 69999763
|
|
| >TIGR02818 adh_III_F_hyde S-(hydroxymethyl)glutathione dehydrogenase/class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.1e-43 Score=318.70 Aligned_cols=310 Identities=19% Similarity=0.221 Sum_probs=247.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+.+... +.+ +++++ +|.| .++++||+|||.++|+|++|++.+.|..+...+|.++|||++| +|+++
T Consensus 2 ~~a~~~~~~--~~~----l~~~~--~~~P-~~~~~eVlI~v~a~gi~~sD~~~~~g~~~~~~~p~i~GhE~~G--~V~~v 70 (368)
T TIGR02818 2 SRAAVAWAA--GQP----LKIEE--VDVE-MPQKGEVLVRIVATGVCHTDAFTLSGADPEGVFPVILGHEGAG--IVEAV 70 (368)
T ss_pred ceEEEEecC--CCC----eEEEE--ecCC-CCCCCeEEEEEEEecccHHHHHHhcCCCCCCCCCeeeccccEE--EEEEE
Confidence 688888877 544 56655 5555 4589999999999999999999888865444568999999777 99999
Q ss_pred cCCCCCCCCCCEEEec---------------------------------------------------cccceeEeecCCc
Q 019332 87 DSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVTAPQ 115 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~~~~ 115 (342)
|++++++++||+|++. |+|+||+.++.+.
T Consensus 71 G~~v~~~~~GdrV~~~~~~~cg~C~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~~aey~~v~~~~ 150 (368)
T TIGR02818 71 GEGVTSVKVGDHVIPLYTAECGECKFCLSGKTNLCVAVRETQGKGLMPDGTSRFSKDGQPIYHYMGCSTFSEYTVVPEIS 150 (368)
T ss_pred CCCCccCCCCCEEEEcCCCCCCCChhhhCCCcccccCcccccccccccCCccccccCCCcccccccCccceeeEEechhh
Confidence 9999999999999752 4899999999999
Q ss_pred ceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHH
Q 019332 116 LFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLK 194 (342)
Q Consensus 116 ~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~ 194 (342)
++++ |++++.. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++.++
T Consensus 151 ~~~l-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~iG~~a~q~Ak~~G~~~Vi~~~~~~~~~~~a~ 227 (368)
T TIGR02818 151 LAKI-NPAAPLE-EVCLLGCGVTTGIGAVLNTAKVEEGDTVAVFGL-GGIGLSVIQGARMAKASRIIAIDINPAKFELAK 227 (368)
T ss_pred eEEC-CCCCCHH-HhhhhcchhHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH
Confidence 9999 9994444 377888899999999877789999999999985 9999999999999999 8999999999999998
Q ss_pred HHcCCCeeEecCCc-hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchHHH
Q 019332 195 NKFGFDEAFNYKEE-PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLMYL 271 (342)
Q Consensus 195 ~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~ 271 (342)
++|++.++++++. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... .........+
T Consensus 228 -~~Ga~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~G~~~~~~~~~~~~~~~~G~~v~~g~~~~~----~~~~~~~~~~ 302 (368)
T TIGR02818 228 -KLGATDCVNPNDYDKPIQEVIVEITDGGVDYSFECIGNVNVMRAALECCHKGWGESIIIGVAGAG----QEISTRPFQL 302 (368)
T ss_pred -HhCCCeEEcccccchhHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCCeEEEEeccCCC----CcccccHHHH
Confidence 9999999987741 156777888877689999999997 6788999999886 999999975321 0111122222
Q ss_pred HhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 272 VTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+. +..+.++..... .....+.++++++.++.+++ .++.+|+|+++.+|++.+.+++. .|++|++
T Consensus 303 ~~-~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~i~~~~~it~~~~l~~~~~A~~~~~~~~~-~k~~v~~ 368 (368)
T TIGR02818 303 VT-GRVWRGSAFGGV--KGRTELPGIVEQYMKGEIALDDFVTHTMPLEDINEAFDLMHEGKS-IRTVIHY 368 (368)
T ss_pred hc-cceEEEeeccCC--CcHHHHHHHHHHHHCCCCCchhheeEEecHHHHHHHHHHHhCCCc-eeEEeeC
Confidence 22 333444432211 12456888999999998864 57788999999999999988764 6998864
|
The members of this protein family show dual function. First, they remove formaldehyde, a toxic metabolite, by acting as S-(hydroxymethyl)glutathione dehydrogenase (1.1.1.284). S-(hydroxymethyl)glutathione can form spontaneously from formaldehyde and glutathione, and so this enzyme previously was designated glutathione-dependent formaldehyde dehydrogenase. These same proteins are also designated alcohol dehydrogenase (EC 1.1.1.1) of class III, for activities that do not require glutathione; they tend to show poor activity for ethanol among their various substrate alcohols. |
| >cd08300 alcohol_DH_class_III class III alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-43 Score=317.74 Aligned_cols=310 Identities=22% Similarity=0.276 Sum_probs=249.5
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+|||+++.+. +++ +++++ +|.| .++++||+|||.++|+|++|++.+.|..+...+|.++|||++| +|++
T Consensus 2 ~~~a~~~~~~--~~~----~~~~~--~~~P-~~~~~eVlIrv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G--~V~~ 70 (368)
T cd08300 2 TCKAAVAWEA--GKP----LSIEE--VEVA-PPKAGEVRIKILATGVCHTDAYTLSGADPEGLFPVILGHEGAG--IVES 70 (368)
T ss_pred cceEEEEecC--CCC----cEEEE--eecC-CCCCCEEEEEEEEEEechhhHHHhcCCCccCCCCceeccceeE--EEEE
Confidence 5789988877 544 56765 4555 4589999999999999999999888865444678999999776 9999
Q ss_pred ecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeecCC
Q 019332 86 LDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVTAP 114 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~~~ 114 (342)
+|+++++|++||+|++. |+|+||+.++.+
T Consensus 71 vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~~~ 150 (368)
T cd08300 71 VGEGVTSVKPGDHVIPLYTPECGECKFCKSGKTNLCQKIRATQGKGLMPDGTSRFSCKGKPIYHFMGTSTFSEYTVVAEI 150 (368)
T ss_pred eCCCCccCCCCCEEEEcCCCCCCCChhhcCCCcCcCCCccccccccccCCCccccccCCcccccccccccceeEEEEchh
Confidence 99999999999999863 479999999999
Q ss_pred cceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHH
Q 019332 115 QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLL 193 (342)
Q Consensus 115 ~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~ 193 (342)
.++++ |++++.. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++.+
T Consensus 151 ~~~~i-P~~l~~~-~aa~l~~~~~ta~~a~~~~~~~~~g~~VlV~G~-G~vG~~a~~~ak~~G~~~vi~~~~~~~~~~~~ 227 (368)
T cd08300 151 SVAKI-NPEAPLD-KVCLLGCGVTTGYGAVLNTAKVEPGSTVAVFGL-GAVGLAVIQGAKAAGASRIIGIDINPDKFELA 227 (368)
T ss_pred ceEeC-CCCCChh-hhhhhccchhhhHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 99999 9995444 377888899999999877788999999999985 9999999999999999 799999999999999
Q ss_pred HHHcCCCeeEecCCch-hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchHH
Q 019332 194 KNKFGFDEAFNYKEEP-DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLMY 270 (342)
Q Consensus 194 ~~~~g~~~v~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 270 (342)
+ ++|+++++++++.. ++.+.+++++++++|++|||+|+ ..+..++++++++ |+++.+|..... .........
T Consensus 228 ~-~lGa~~~i~~~~~~~~~~~~v~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~ 302 (368)
T cd08300 228 K-KFGATDCVNPKDHDKPIQQVLVEMTDGGVDYTFECIGNVKVMRAALEACHKGWGTSVIIGVAAAG----QEISTRPFQ 302 (368)
T ss_pred H-HcCCCEEEcccccchHHHHHHHHHhCCCCcEEEECCCChHHHHHHHHhhccCCCeEEEEccCCCC----CccccCHHH
Confidence 8 99999999887631 47788888877789999999998 6889999999886 999999975321 011112222
Q ss_pred HHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 271 LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+. ++..+.++....+ ...+.+.++++++.+|.+++ .++.+|+|+++++|++.+.+++. .|++++
T Consensus 303 ~~-~~~~~~g~~~~~~--~~~~~~~~~~~~~~~g~l~~~~~i~~~~~le~~~~A~~~~~~~~~-~k~~~~ 368 (368)
T cd08300 303 LV-TGRVWKGTAFGGW--KSRSQVPKLVEDYMKGKIKVDEFITHTMPLDEINEAFDLMHAGKS-IRTVVK 368 (368)
T ss_pred Hh-hcCeEEEEEeccc--CcHHHHHHHHHHHHcCCCChhhceeeeEcHHHHHHHHHHHhCCCC-ceeeeC
Confidence 22 2334444433322 12456788999999999985 46778899999999999988765 588874
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dim |
| >PLN02178 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.4e-43 Score=315.97 Aligned_cols=305 Identities=18% Similarity=0.192 Sum_probs=246.4
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+.||+.+... +.+. .+++. ++|.| .++++||+|||.++|+|++|++.+.|.+....+|.++|||++| +|++
T Consensus 4 ~~~a~~~~~~--~~~~--~l~~~--~~~~p-~~~~~eVlVkV~a~gic~sD~~~~~G~~~~~~~p~i~GhE~aG--~Vv~ 74 (375)
T PLN02178 4 QNKAFGWAAN--DESG--VLSPF--HFSRR-ENGENDVTVKILFCGVCHSDLHTIKNHWGFSRYPIIPGHEIVG--IATK 74 (375)
T ss_pred cceeEEEEEc--cCCC--CceEE--eecCC-CCCCCeEEEEEEEEcCchHHHHHhcCCCCCCCCCcccCceeeE--EEEE
Confidence 4567777766 5442 34444 45666 4589999999999999999999988765333468899999777 9999
Q ss_pred ecCCCCCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecCCCCCcc
Q 019332 86 LDSENPEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLS 127 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~ 127 (342)
+|+++++|++||+|+. .|+|+||+.++++.++++ |++++..
T Consensus 75 vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~ls~~ 153 (375)
T PLN02178 75 VGKNVTKFKEGDRVGVGVIIGSCQSCESCNQDLENYCPKVVFTYNSRSSDGTRNQGGYSDVIVVDHRFVLSI-PDGLPSD 153 (375)
T ss_pred ECCCCCccCCCCEEEEcCccCCCCCChhHhCcchhcCCCccccccccccCCCcCCCccccEEEEchHHeEEC-CCCCCHH
Confidence 9999999999999973 268999999999999999 9995444
Q ss_pred chhhccCCchhhHHHhhhhhcC-CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHcCCCeeEec
Q 019332 128 YYTGILGMPGMTAYAGFYEVCS-PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNKFGFDEAFNY 205 (342)
Q Consensus 128 ~~~a~l~~~~~ta~~al~~~~~-~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~~g~~~v~~~ 205 (342)
+++.+++.+.|||+++..... .++|++|+|.|+ |++|++++|+|+..|++|+++++++++ .+.++ ++|+++++++
T Consensus 154 -~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~G~-G~vG~~avq~Ak~~Ga~Vi~~~~~~~~~~~~a~-~lGa~~~i~~ 230 (375)
T PLN02178 154 -SGAPLLCAGITVYSPMKYYGMTKESGKRLGVNGL-GGLGHIAVKIGKAFGLRVTVISRSSEKEREAID-RLGADSFLVT 230 (375)
T ss_pred -HcchhhccchHHHHHHHHhCCCCCCCCEEEEEcc-cHHHHHHHHHHHHcCCeEEEEeCChHHhHHHHH-hCCCcEEEcC
Confidence 377888999999999865433 368999999986 999999999999999999998877554 67777 8999998887
Q ss_pred CCchhHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 206 KEEPDLNEALKRYFPEGIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
++. +.+++.++ ++|++|||+|.. .+..++++++++|+++.+|...+. ...+...++.+++++.++...
T Consensus 231 ~~~----~~v~~~~~-~~D~vid~~G~~~~~~~~~~~l~~~G~iv~vG~~~~~------~~~~~~~~~~~~~~i~g~~~~ 299 (375)
T PLN02178 231 TDS----QKMKEAVG-TMDFIIDTVSAEHALLPLFSLLKVSGKLVALGLPEKP------LDLPIFPLVLGRKMVGGSQIG 299 (375)
T ss_pred cCH----HHHHHhhC-CCcEEEECCCcHHHHHHHHHhhcCCCEEEEEccCCCC------CccCHHHHHhCCeEEEEeCcc
Confidence 652 34555543 699999999984 789999999999999999875321 123455667788888887654
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
. .+.+.++++++.+|++++.+ .+|||+++++|++.+.+++..||+|++++
T Consensus 300 ~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gkvvi~~~ 349 (375)
T PLN02178 300 G-----MKETQEMLEFCAKHKIVSDI-ELIKMSDINSAMDRLAKSDVRYRFVIDVA 349 (375)
T ss_pred C-----HHHHHHHHHHHHhCCCcccE-EEEeHHHHHHHHHHHHcCCCceEEEEEec
Confidence 4 45688899999999999877 46899999999999999988899999873
|
|
| >PLN02514 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-42 Score=311.86 Aligned_cols=306 Identities=19% Similarity=0.180 Sum_probs=251.4
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
.+++||+++++ +++ +++++.+ .| +++++||+|||.++++|++|++.+.|.+....+|.++|||++| +|+
T Consensus 8 ~~~~~~~~~~~--~~~----~~~~~~~--~p-~~~~~eVlVrv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G--~Vv 76 (357)
T PLN02514 8 KKTTGWAARDP--SGH----LSPYTYT--LR-KTGPEDVVIKVIYCGICHTDLHQIKNDLGMSNYPMVPGHEVVG--EVV 76 (357)
T ss_pred ceEEEEEEecC--CCC----ceEEeec--CC-CCCCCcEEEEEEEeccChHHHHhhcCCcCcCCCCccCCceeeE--EEE
Confidence 45789999988 655 5666644 44 4589999999999999999999888765434468899999776 999
Q ss_pred EecCCCCCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecCCCCCc
Q 019332 85 VLDSENPEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQHTDVPL 126 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~ 126 (342)
++|+++++|++||+|+. .|+|+||+.++.+.++++ |++++.
T Consensus 77 ~vG~~v~~~~~Gd~V~~~~~~~~c~~C~~c~~g~~~~c~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~ 155 (357)
T PLN02514 77 EVGSDVSKFTVGDIVGVGVIVGCCGECSPCKSDLEQYCNKRIWSYNDVYTDGKPTQGGFASAMVVDQKFVVKI-PEGMAP 155 (357)
T ss_pred EECCCcccccCCCEEEEcCccccCCCChhHhCCCcccCCCccccccccccCCccCCCccccEEEEchHHeEEC-CCCCCH
Confidence 99999999999999963 278999999999999999 999544
Q ss_pred cchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecC
Q 019332 127 SYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYK 206 (342)
Q Consensus 127 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~ 206 (342)
. +++.+++.+.|||+++...+..++|++|+|+| +|++|++++|+|+..|++|+++++++++++.+.+++|++.++++.
T Consensus 156 ~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~G-~G~vG~~av~~Ak~~G~~vi~~~~~~~~~~~~~~~~Ga~~~i~~~ 233 (357)
T PLN02514 156 E-QAAPLLCAGVTVYSPLSHFGLKQSGLRGGILG-LGGVGHMGVKIAKAMGHHVTVISSSDKKREEALEHLGADDYLVSS 233 (357)
T ss_pred H-HhhhhhhhHHHHHHHHHHcccCCCCCeEEEEc-ccHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHhcCCcEEecCC
Confidence 4 37788999999999997766678999999997 599999999999999999999998888776665479998777665
Q ss_pred CchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 207 EEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 207 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
+. +.+++.+. ++|++|||+|. ..+..++++++++|+++.+|..... .......++.+++++.++....
T Consensus 234 ~~----~~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~ 302 (357)
T PLN02514 234 DA----AEMQEAAD-SLDYIIDTVPVFHPLEPYLSLLKLDGKLILMGVINTP------LQFVTPMLMLGRKVITGSFIGS 302 (357)
T ss_pred Ch----HHHHHhcC-CCcEEEECCCchHHHHHHHHHhccCCEEEEECCCCCC------CcccHHHHhhCCcEEEEEecCC
Confidence 42 23444443 69999999997 6888999999999999999975431 1234556677888888876554
Q ss_pred cccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 286 YYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
...++++++++.+|.+++.+. +|+|+++.+|++.+.+++..||+|+.++.
T Consensus 303 -----~~~~~~~~~~~~~g~l~~~i~-~~~l~~~~~A~~~~~~~~~~gk~v~~~~~ 352 (357)
T PLN02514 303 -----MKETEEMLEFCKEKGLTSMIE-VVKMDYVNTAFERLEKNDVRYRFVVDVAG 352 (357)
T ss_pred -----HHHHHHHHHHHHhCCCcCcEE-EEcHHHHHHHHHHHHcCCCceeEEEEccc
Confidence 456888999999999987764 78999999999999999988999998753
|
|
| >cd08277 liver_alcohol_DH_like Liver alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-42 Score=311.67 Aligned_cols=308 Identities=20% Similarity=0.262 Sum_probs=249.1
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
+++||+++.+. +++ +++++.+. | .+++++|+|||.++++|++|++.+.|..+ ..+|.++|||++| +|+
T Consensus 1 ~~~ka~~~~~~--~~~----~~~~~~~~--p-~~~~~evlVkv~~~gi~~sD~~~~~g~~~-~~~p~i~G~e~~G--~V~ 68 (365)
T cd08277 1 IKCKAAVAWEA--GKP----LVIEEIEV--A-PPKANEVRIKMLATSVCHTDILAIEGFKA-TLFPVILGHEGAG--IVE 68 (365)
T ss_pred CccEEEEEccC--CCC----cEEEEEEC--C-CCCCCEEEEEEEEEeechhhHHHhcCCCC-CCCCeecccceeE--EEE
Confidence 36799999887 544 57766544 4 45899999999999999999998887543 3467899999776 999
Q ss_pred EecCCCCCCCCCCEEEec--------------------------------------------------cccceeEeecCC
Q 019332 85 VLDSENPEFKKGDLVWGM--------------------------------------------------TGWEEYSLVTAP 114 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~--------------------------------------------------g~~~~~~~v~~~ 114 (342)
++|++++++++||+|++. |+|+||+.++.+
T Consensus 69 ~vG~~v~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~c~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~ae~~~v~~~ 148 (365)
T cd08277 69 SVGEGVTNLKPGDKVIPLFIGQCGECSNCRSGKTNLCQKYRANESGLMPDGTSRFTCKGKKIYHFLGTSTFSQYTVVDEN 148 (365)
T ss_pred eeCCCCccCCCCCEEEECCCCCCCCCchhcCcCcccCcCccccccccccCCccccccCCcccccccccccceeeEEEchh
Confidence 999999999999999863 679999999999
Q ss_pred cceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHH
Q 019332 115 QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLL 193 (342)
Q Consensus 115 ~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~ 193 (342)
.++++ |++++.. +++.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++.+
T Consensus 149 ~~~~l-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~~ 225 (365)
T cd08277 149 YVAKI-DPAAPLE-HVCLLGCGFSTGYGAAWNTAKVEPGSTVAVFGL-GAVGLSAIMGAKIAGASRIIGVDINEDKFEKA 225 (365)
T ss_pred heEEC-CCCCCHH-HhhHhcchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHH
Confidence 99999 9995444 377888899999999877788999999999985 9999999999999999 799999999999999
Q ss_pred HHHcCCCeeEecCCc-hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchHH
Q 019332 194 KNKFGFDEAFNYKEE-PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLMY 270 (342)
Q Consensus 194 ~~~~g~~~v~~~~~~-~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~ 270 (342)
+ ++|+++++++.+. .++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|...+.+. ......
T Consensus 226 ~-~~ga~~~i~~~~~~~~~~~~~~~~~~~g~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~~~-----~~~~~~ 299 (365)
T cd08277 226 K-EFGATDFINPKDSDKPVSEVIREMTGGGVDYSFECTGNADLMNEALESTKLGWGVSVVVGVPPGAEL-----SIRPFQ 299 (365)
T ss_pred H-HcCCCcEeccccccchHHHHHHHHhCCCCCEEEECCCChHHHHHHHHhcccCCCEEEEEcCCCcccc-----ccCHhH
Confidence 8 9999988887653 145677777776689999999997 7788999999885 99999997543211 122223
Q ss_pred HHhcceeeecceecccccchHHHHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 271 LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
++. +.++.++....+. ....++++++++.++.++ +.+..+|+|+++++|++.+.+++ ..|+++
T Consensus 300 ~~~-~~~i~g~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~A~~~~~~~~-~~k~~i 364 (365)
T cd08277 300 LIL-GRTWKGSFFGGFK--SRSDVPKLVSKYMNKKFDLDELITHVLPFEEINKGFDLMKSGE-CIRTVI 364 (365)
T ss_pred Hhh-CCEEEeeecCCCC--hHHHHHHHHHHHHCCCcChhHheeeEEchhhHHHHHHHHHCCC-CceEee
Confidence 332 6777766554322 234678899999998765 45777899999999999998887 458876
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall structural similarity, but differ i |
| >PRK10309 galactitol-1-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.4e-42 Score=309.13 Aligned_cols=310 Identities=21% Similarity=0.229 Sum_probs=244.0
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ + .+++.+ +|.|.+++++||+|||.++++|++|+..+... .....|.++|||++| +|+++
T Consensus 1 Mka~~~~~~--~-----~~~~~~--~~~P~~~~~~evlV~v~~~gi~~~D~~~~~~~-~~~~~p~i~G~e~~G--~V~~v 68 (347)
T PRK10309 1 MKSVVNDTD--G-----IVRVAE--SPIPEIKHQDDVLVKVASSGLCGSDIPRIFKN-GAHYYPITLGHEFSG--YVEAV 68 (347)
T ss_pred CceEEEeCC--C-----ceEEEE--CCCCCCCCCCEEEEEEEEEEEchhcHHHHhCC-CCCCCCcccccceEE--EEEEe
Confidence 589999876 4 245655 55554336899999999999999998643221 112357899999776 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|+++++|++||+|+++ |+|++|+.++.+.++++ |++ ++++.+++..+
T Consensus 69 G~~v~~~~vGd~V~~~~~~~c~~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~l-P~~--~s~~~aa~~~~ 145 (347)
T PRK10309 69 GSGVDDLHPGDAVACVPLLPCFTCPECLRGFYSLCAKYDFIGSRRDGGNAEYIVVKRKNLFAL-PTD--MPIEDGAFIEP 145 (347)
T ss_pred CCCCCCCCCCCEEEECCCcCCCCCcchhCcCcccCCCcceeccCCCCccceeEEeehHHeEEC-cCC--CCHHHhhhhhH
Confidence 9999999999999863 78999999999999999 998 45443333335
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+.++++++ +...++++++|||+|+ |++|++++|+|+..|++ |+++++++++.+.++ ++|+++++++++. + .+++
T Consensus 146 ~~~~~~~~-~~~~~~~g~~vlV~G~-g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~-~~~~ 220 (347)
T PRK10309 146 ITVGLHAF-HLAQGCEGKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDINSEKLALAK-SLGAMQTFNSREM-S-APQI 220 (347)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHHHHH-HcCCceEecCccc-C-HHHH
Confidence 66788886 5678899999999985 99999999999999996 788999999999998 9999999998775 5 5667
Q ss_pred HHHCCC-Ccc-EEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 216 KRYFPE-GID-IYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 216 ~~~~~~-~~d-~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
.+.+.+ ++| ++|||+|+ ..+..++++++++|+++.+|...+. . +.....+..++.+++++.++..........+
T Consensus 221 ~~~~~~~~~d~~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~-~--~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~ 297 (347)
T PRK10309 221 QSVLRELRFDQLILETAGVPQTVELAIEIAGPRAQLALVGTLHHD-L--HLTSATFGKILRKELTVIGSWMNYSSPWPGQ 297 (347)
T ss_pred HHHhcCCCCCeEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC-c--ccChhhhhHHhhcCcEEEEEeccccCCcchh
Confidence 777766 888 99999998 6889999999999999999975432 1 0111123356778899888755321111245
Q ss_pred HHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 293 FLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.++++++++.+|.++ +.++.+|+|+++++|++.+.+++..||+|+++
T Consensus 298 ~~~~~~~~~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 346 (347)
T PRK10309 298 EWETASRLLTERKLSLEPLIAHRGSFESFAQAVRDLAGNPMPGKVLLQI 346 (347)
T ss_pred HHHHHHHHHHcCCCCchhheEEEeeHHHHHHHHHHHhcCCcceEEEEeC
Confidence 678899999999985 55777889999999999999998889999975
|
|
| >cd08292 ETR_like_2 2-enoyl thioester reductase (ETR) like proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=8e-42 Score=305.85 Aligned_cols=314 Identities=16% Similarity=0.210 Sum_probs=261.0
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ ++|. +.++++ ++|.| .+.+++|+|||.++++|++|++.+.|..+ ....|.++|||++| +|++
T Consensus 1 m~a~~~~~~--~~~~-~~~~~~--~~~~p-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~p~~~G~e~~G--~V~~ 72 (324)
T cd08292 1 MRAAVHTQF--GDPA-DVLEIG--EVPKP-TPGAGEVLVRTTLSPIHNHDLWTIRGTYGYKPELPAIGGSEAVG--VVDA 72 (324)
T ss_pred CeeEEEccC--CChh-HeEEEe--ecCCC-CCCCCeEEEEEEEccCCHHHHHHhcCcCCCCCCCCCCCCcceEE--EEEE
Confidence 589999877 6551 234554 45666 46899999999999999999988877553 23457889999777 9999
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
+|++++++++||+|+++ |+|++|+.++...++++ |++++.. +++.+++.+++|++++ ..+++++|++|||+|++
T Consensus 73 ~G~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~~-~~~~~~~g~~vlI~g~~ 149 (324)
T cd08292 73 VGEGVKGLQVGQRVAVAPVHGTWAEYFVAPADGLVPL-PDGISDE-VAAQLIAMPLSALMLL-DFLGVKPGQWLIQNAAG 149 (324)
T ss_pred eCCCCCCCCCCCEEEeccCCCcceeEEEEchHHeEEC-CCCCCHH-HhhhccccHHHHHHHH-HhhCCCCCCEEEEcccc
Confidence 99999999999999986 79999999999999999 9984443 3777888899999998 45889999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++|+|+++|++++++++++++.+.++ ++|++.++++++. ++.+.+++.+.+ ++|++|||+|+.....++++
T Consensus 150 g~ig~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~d~~g~~~~~~~~~~ 227 (324)
T cd08292 150 GAVGKLVAMLAAARGINVINLVRRDAGVAELR-ALGIGPVVSTEQP-GWQDKVREAAGGAPISVALDSVGGKLAGELLSL 227 (324)
T ss_pred cHHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-hcCCCEEEcCCCc-hHHHHHHHHhCCCCCcEEEECCCChhHHHHHHh
Confidence 99999999999999999999999999989998 7899888998887 888899998887 89999999999888899999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
++++|+++.+|..... .........+.+++++.++....+ +....+.++++++++.+|.+++.+..+|++
T Consensus 228 l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~~~ 302 (324)
T cd08292 228 LGEGGTLVSFGSMSGE-----PMQISSGDLIFKQATVRGFWGGRWSQEMSVEYRKRMIAELLTLALKGQLLLPVEAVFDL 302 (324)
T ss_pred hcCCcEEEEEecCCCC-----CCcCCHHHHhhCCCEEEEEEcHHhhhhcCHHHHHHHHHHHHHHHHCCCccCccccEecH
Confidence 9999999999875321 112233445668888888776543 223356788899999999998766778899
Q ss_pred ccHHHHHHHHHcCCccceEEEE
Q 019332 317 ESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+++.+|++.+.++...||++++
T Consensus 303 ~~~~~a~~~~~~~~~~~kvvv~ 324 (324)
T cd08292 303 GDAAKAAAASMRPGRAGKVLLR 324 (324)
T ss_pred HHHHHHHHHHHcCCCCceEEeC
Confidence 9999999999988888998873
|
2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the 2-enoyl thioester reductase (ETR) like proteins. ETR catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordina |
| >cd08233 butanediol_DH_like (2R,3R)-2,3-butanediol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-41 Score=305.82 Aligned_cols=301 Identities=21% Similarity=0.211 Sum_probs=249.2
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-----------CccccCCCCC
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-----------SYVESFKPGM 75 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-----------~~~~p~~~G~ 75 (342)
||||++.++ + .+++++ +|.| +++++||+||+.++++|++|++.+.+... ...+|.++||
T Consensus 1 mka~~~~~~--~-----~l~~~~--~~~p-~~~~~evlV~v~a~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~p~i~G~ 70 (351)
T cd08233 1 MKAARYHGR--K-----DIRVEE--VPEP-PVKPGEVKIKVAWCGICGSDLHEYLDGPIFIPTEGHPHLTGETAPVTLGH 70 (351)
T ss_pred CceEEEecC--C-----ceEEEe--ccCC-CCCCCeEEEEEEEEEECccchHhhcCCCccccccccccccccCCCceecc
Confidence 589999866 3 356665 4445 56899999999999999999876553211 0125789999
Q ss_pred cccccEEEEEecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCC
Q 019332 76 PISGYGVAKVLDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDV 124 (342)
Q Consensus 76 e~~G~g~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~ 124 (342)
|++| +|+++|++++++++||+|++ .|+|++|+.++.+.++++ |+++
T Consensus 71 e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~~~~~~~~~l-P~~~ 147 (351)
T cd08233 71 EFSG--VVVEVGSGVTGFKVGDRVVVEPTIKCGTCGACKRGLYNLCDSLGFIGLGGGGGGFAEYVVVPAYHVHKL-PDNV 147 (351)
T ss_pred cceE--EEEEeCCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCCceeccCCCCCceeeEEEechHHeEEC-cCCC
Confidence 9666 99999999999999999986 378999999999999999 9984
Q ss_pred CccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeE
Q 019332 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAF 203 (342)
Q Consensus 125 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~ 203 (342)
+++.+++..++.|||+++ ..++++++++|||+|+ |++|++++|+|+..|+ +|+++.+++++.++++ ++|++.++
T Consensus 148 --~~~~aa~~~~~~ta~~~l-~~~~~~~g~~vlI~g~-g~vG~~a~q~a~~~G~~~v~~~~~~~~~~~~~~-~~ga~~~i 222 (351)
T cd08233 148 --PLEEAALVEPLAVAWHAV-RRSGFKPGDTALVLGA-GPIGLLTILALKAAGASKIIVSEPSEARRELAE-ELGATIVL 222 (351)
T ss_pred --CHHHhhhccHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEE
Confidence 443333446888999999 6788999999999985 9999999999999999 8999999999999998 89999999
Q ss_pred ecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecc
Q 019332 204 NYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGF 281 (342)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
++++. ++.+.+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|.... ........++.+++++.+.
T Consensus 223 ~~~~~-~~~~~l~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~g~ 295 (351)
T cd08233 223 DPTEV-DVVAEVRKLTGGGGVDVSFDCAGVQATLDTAIDALRPRGTAVNVAIWEK------PISFNPNDLVLKEKTLTGS 295 (351)
T ss_pred CCCcc-CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCCEEEEEccCCC------CCccCHHHHHhhCcEEEEE
Confidence 99887 888999988877 79999999996 788999999999999999997542 1234455667788888887
Q ss_pred eecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccH-HHHHHHHHcCCcc-ceEEE
Q 019332 282 LVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESA-PATLIGLFSGRNV-GKQVV 337 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~-~~a~~~~~~~~~~-gkvvv 337 (342)
.... .+.++++++++.++.+++ .+..+|+++++ ++|++.+.+++.. ||+||
T Consensus 296 ~~~~-----~~~~~~~~~~~~~g~l~~~~~i~~~~~l~e~~~~a~~~~~~~~~~~~k~v~ 350 (351)
T cd08233 296 ICYT-----REDFEEVIDLLASGKIDAEPLITSRIPLEDIVEKGFEELINDKEQHVKILV 350 (351)
T ss_pred eccC-----cchHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHHHhCCCCceEEEe
Confidence 5443 467889999999999964 46778899996 7999999998864 89987
|
(2R,3R)-2,3-butanediol dehydrogenase, a zinc-dependent medium chain alcohol dehydrogenase, catalyzes the NAD(+)-dependent oxidation of (2R,3R)-2,3-butanediol and meso-butanediol to acetoin. BDH functions as a homodimer. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. |
| >TIGR03201 dearomat_had 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-41 Score=305.30 Aligned_cols=302 Identities=20% Similarity=0.225 Sum_probs=243.9
Q ss_pred EEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-CCccccCCCCCcccccEEEEEecC
Q 019332 10 VILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-GSYVESFKPGMPISGYGVAKVLDS 88 (342)
Q Consensus 10 ~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~g~v~~vG~ 88 (342)
+++.++ |.+ +++++ +|.| .++++||+|||.++|+|++|++.+.+.. ....+|.++|||++| +|+++|+
T Consensus 2 ~~~~~~--g~~----~~~~~--~p~P-~~~~~evlVrv~~~gic~sD~~~~~~~~~~~~~~p~i~GhE~~G--~V~~vG~ 70 (349)
T TIGR03201 2 WMMTEP--GKP----MVKTR--VEIP-ELGAGDVVVKVAGCGVCHTDLSYYYMGVRTNHALPLALGHEISG--RVIQAGA 70 (349)
T ss_pred ceEecC--CCC----ceEEe--ccCC-CCCCCeEEEEEEEEeecccchHHHcCCCCccCCCCeeccccceE--EEEEeCC
Confidence 345555 543 56655 5555 4689999999999999999998764433 233568899999776 9999999
Q ss_pred CCCCCCCCCEEEe------------------------------ccccceeEeecCCcceeecCC------CCCccchhhc
Q 019332 89 ENPEFKKGDLVWG------------------------------MTGWEEYSLVTAPQLFKIQHT------DVPLSYYTGI 132 (342)
Q Consensus 89 ~v~~~~vGd~V~~------------------------------~g~~~~~~~v~~~~~~~i~p~------~~~~~~~~a~ 132 (342)
+++.+ +||+|++ .|+|+||+.++.+.++++ |+ +++.. .+++
T Consensus 71 ~v~~~-~GdrV~~~~~~~cg~c~~c~~g~~~~c~~~~~~g~~~~G~~ae~~~v~~~~~~~i-p~~~~~~~~~~~~-~~a~ 147 (349)
T TIGR03201 71 GAASW-IGKAVIVPAVIPCGECELCKTGRGTICRAQKMPGNDMQGGFASHIVVPAKGLCVV-DEARLAAAGLPLE-HVSV 147 (349)
T ss_pred CcCCC-CCCEEEECCCCCCCCChhhhCcCcccCCCCCccCcCCCCcccceEEechHHeEEC-CcccccccCCCHH-Hhhh
Confidence 99887 9999985 278999999999999999 87 63333 2778
Q ss_pred cCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc--hh
Q 019332 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE--PD 210 (342)
Q Consensus 133 l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~--~~ 210 (342)
++.++.|||+++.. .++++|++|+|+|+ |++|++++|+|+..|++|++++++++|+++++ ++|++.++++.+. .+
T Consensus 148 ~~~~~~ta~~a~~~-~~~~~g~~VlV~G~-G~vG~~a~~~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~~i~~~~~~~~~ 224 (349)
T TIGR03201 148 VADAVTTPYQAAVQ-AGLKKGDLVIVIGA-GGVGGYMVQTAKAMGAAVVAIDIDPEKLEMMK-GFGADLTLNPKDKSARE 224 (349)
T ss_pred hcchHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HhCCceEecCccccHHH
Confidence 88899999999954 78999999999998 99999999999999999999999999999998 8999988887653 15
Q ss_pred HHHHHHHHCCC-Ccc----EEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 211 LNEALKRYFPE-GID----IYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 211 ~~~~i~~~~~~-~~d----~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
+.+.+++.+++ ++| ++|||+|+ ..+..++++++++|+++.+|...+. .......++.++.++.+.+..
T Consensus 225 ~~~~~~~~t~~~g~d~~~d~v~d~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~~~g~~~~ 298 (349)
T TIGR03201 225 VKKLIKAFAKARGLRSTGWKIFECSGSKPGQESALSLLSHGGTLVVVGYTMAK------TEYRLSNLMAFHARALGNWGC 298 (349)
T ss_pred HHHHHHhhcccCCCCCCcCEEEECCCChHHHHHHHHHHhcCCeEEEECcCCCC------cccCHHHHhhcccEEEEEecC
Confidence 67778888876 776 89999998 5677899999999999999976431 123444566667777775543
Q ss_pred ccccchHHHHHHHHHHHHcCCceee-eeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIVYV-EDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~~~-~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
. .+.++++++++.+|.+++. +..+|+|+++++|++.+.+++..||+++++
T Consensus 299 ~-----~~~~~~~~~~i~~g~i~~~~~i~~~~l~~~~~A~~~~~~~~~~~k~~~~~ 349 (349)
T TIGR03201 299 P-----PDRYPAALDLVLDGKIQLGPFVERRPLDQIEHVFAAAHHHKLKRRAILTP 349 (349)
T ss_pred C-----HHHHHHHHHHHHcCCCCcccceEEecHHHHHHHHHHHHcCCccceEEecC
Confidence 3 4568899999999999753 224689999999999999999889998853
|
Members of this protein family are 6-hydroxycyclohex-1-ene-1-carbonyl-CoA dehydrogenase, an enzyme in the anaerobic metabolism of aromatic enzymes by way of benzoyl-CoA, as seen in Thauera aromatica, Geobacter metallireducens, and Azoarcus sp. The experimentally characterized form from T. aromatica uses only NAD+, not NADP+. Note that Rhodopseudomonas palustris uses a different pathway to perform a similar degradation of benzoyl-CoA to 3-hydroxpimelyl-CoA. |
| >cd08238 sorbose_phosphate_red L-sorbose-1-phosphate reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.1e-41 Score=308.90 Aligned_cols=310 Identities=16% Similarity=0.150 Sum_probs=240.4
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCccccccc-ccCCC-C-----ccccCCCCCcc
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM-TNIKG-S-----YVESFKPGMPI 77 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~-~~~~~-~-----~~~p~~~G~e~ 77 (342)
|+|||+++..+ + ++++++ +|.| .++++||+|||.++|+|++|++.+ .|... . ..+|.++|||+
T Consensus 1 m~~~a~~~~~~--~-----~l~~~e--~p~P-~~~~~eVlVkV~a~gic~sD~~~~~~g~~~~~~~~~~~~~p~i~GhE~ 70 (410)
T cd08238 1 MKTKAWRMYGK--G-----DLRLEK--FELP-EIADDEILVRVISDSLCFSTWKLALQGSDHKKVPNDLAKEPVILGHEF 70 (410)
T ss_pred CCcEEEEEEcC--C-----ceEEEe--cCCC-CCCCCeEEEEEEEeccCCCCHHHHhcCCccccCcccccCCCceecccc
Confidence 45689999766 3 356655 5656 458999999999999999999875 34311 0 13578999997
Q ss_pred cccEEEEEecCCCC-CCCCCCEEEec-------------------cccceeEeecCC----cceeecCCCCCccchhhcc
Q 019332 78 SGYGVAKVLDSENP-EFKKGDLVWGM-------------------TGWEEYSLVTAP----QLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 78 ~G~g~v~~vG~~v~-~~~vGd~V~~~-------------------g~~~~~~~v~~~----~~~~i~p~~~~~~~~~a~l 133 (342)
+| +|+++|++|+ .|++||||++. |+|+||+.++.+ .++++ |++ ++++.+++
T Consensus 71 ~G--~V~~vG~~v~~~~~vGdrV~~~~~~~c~~~~~c~~~g~~~~G~~aey~~v~~~~~~~~~~~l-P~~--l~~~~aal 145 (410)
T cd08238 71 AG--TILKVGKKWQGKYKPGQRFVIQPALILPDGPSCPGYSYTYPGGLATYHIIPNEVMEQDCLLI-YEG--DGYAEASL 145 (410)
T ss_pred EE--EEEEeCCCccCCCCCCCEEEEcCCcCCCCCCCCCCccccCCCcceEEEEecHHhccCCeEEC-CCC--CCHHHHhh
Confidence 76 9999999998 69999999863 789999999997 58999 998 45433333
Q ss_pred CCchh---hHHHhh--------hhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC---EEEEEeCChhhHHHHHHHc--
Q 019332 134 GMPGM---TAYAGF--------YEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKIDLLKNKF-- 197 (342)
Q Consensus 134 ~~~~~---ta~~al--------~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga---~Vi~~~~s~~~~~~~~~~~-- 197 (342)
..++. +++.++ .+.+++++|++|+|+|++|++|++++|+|+..|+ +|++++++++|++.++ ++
T Consensus 146 ~epl~~~~~~~~a~~~~~~~~~~~~~~~~~g~~VlV~G~~G~vG~~aiq~ak~~G~g~~~Vi~~~~~~~r~~~a~-~~~~ 224 (410)
T cd08238 146 VEPLSCVIGAYTANYHLQPGEYRHRMGIKPGGNTAILGGAGPMGLMAIDYAIHGPIGPSLLVVTDVNDERLARAQ-RLFP 224 (410)
T ss_pred cchHHHHHHHhhhcccccccchhhhcCCCCCCEEEEEeCCCHHHHHHHHHHHhcccCCceEEEEcCCHHHHHHHH-Hhcc
Confidence 32322 233332 2446789999999999889999999999999754 8999999999999998 76
Q ss_pred ------CCC-eeEecCC-chhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccc
Q 019332 198 ------GFD-EAFNYKE-EPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHN 267 (342)
Q Consensus 198 ------g~~-~v~~~~~-~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~ 267 (342)
|++ .++++++ . ++.+.+++.+++ ++|++||++|. ..+..++++++++|+++.++...... .....+
T Consensus 225 ~~~~~~Ga~~~~i~~~~~~-~~~~~v~~~t~g~g~D~vid~~g~~~~~~~a~~~l~~~G~~v~~~g~~~~~---~~~~~~ 300 (410)
T cd08238 225 PEAASRGIELLYVNPATID-DLHATLMELTGGQGFDDVFVFVPVPELVEEADTLLAPDGCLNFFAGPVDKN---FSAPLN 300 (410)
T ss_pred ccccccCceEEEECCCccc-cHHHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhccCCeEEEEEccCCCC---cccccc
Confidence 665 5677764 4 688888888877 89999999986 88899999999999887764322110 012344
Q ss_pred hHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 268 LMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
...++.+++++.++.... .+.++++++++.+|++++ .++.+|+|+++.+|++.+. ++..||+|+.++
T Consensus 301 ~~~~~~~~~~i~g~~~~~-----~~~~~~~~~li~~g~i~~~~~it~~~~l~~~~~A~~~~~-~~~~gKvvl~~~ 369 (410)
T cd08238 301 FYNVHYNNTHYVGTSGGN-----TDDMKEAIDLMAAGKLNPARMVTHIGGLNAAAETTLNLP-GIPGGKKLIYTQ 369 (410)
T ss_pred HHHhhhcCcEEEEeCCCC-----HHHHHHHHHHHHcCCCchhhcEEEEecHHHHHHHHHHhh-ccCCceEEEECC
Confidence 556778889988865433 567889999999999987 5777889999999999999 777899999863
|
L-sorbose-1-phosphate reductase, a member of the MDR family, catalyzes the NADPH-dependent conversion of l-sorbose 1-phosphate to d-glucitol 6-phosphate in the metabolism of L-sorbose to (also converts d-fructose 1-phosphate to d-mannitol 6-phosphate). The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the found |
| >cd08237 ribitol-5-phosphate_DH ribitol-5-phosphate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-41 Score=304.06 Aligned_cols=291 Identities=14% Similarity=0.103 Sum_probs=224.8
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC----ccccCCCCCcccccE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS----YVESFKPGMPISGYG 81 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~----~~~p~~~G~e~~G~g 81 (342)
..|+++++.+ +++++++ .|.| + +++||+|||.++|||++|++.+.|.... ..+|.++|||++|
T Consensus 2 ~~~~~~~~~~-------~~~~~~~--~~~P-~-~~~eVlVkv~a~gIc~sD~~~~~G~~~~~~~~~~~P~i~GhE~~G-- 68 (341)
T cd08237 2 INQVYRLVRP-------KFFEVTY--EEEN-L-REDWVIVRPTYLSICHADQRYYQGNRSPEALKKKLPMALIHEGIG-- 68 (341)
T ss_pred cccceEEecc-------ceEEEee--cCCC-C-CCCeEEEEEEEEEEcCccHHHHcCCCCcccccCCCCeeccceeEE--
Confidence 5588888766 3456665 4445 5 8999999999999999999999886421 2468999999776
Q ss_pred EEEEecCCCCCCCCCCEEEec---------------------------cccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 82 VAKVLDSENPEFKKGDLVWGM---------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~---------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
+|+++|.+ .|++||||++. |+|+||++++++.++++ |++ ++++.|++.
T Consensus 69 ~V~~~g~~--~~~vGdrV~~~~~~~~~~~~~~~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v-P~~--l~~~~aa~~ 143 (341)
T cd08237 69 VVVSDPTG--TYKVGTKVVMVPNTPVEKDEIIPENYLPSSRFRSSGYDGFMQDYVFLPPDRLVKL-PDN--VDPEVAAFT 143 (341)
T ss_pred EEEeeCCC--ccCCCCEEEECCCCCchhcccchhccCCCcceeEecCCCceEEEEEEchHHeEEC-CCC--CChHHhhhh
Confidence 99998764 79999999752 77999999999999999 999 554555677
Q ss_pred CchhhHHHhhhhh--cCCCCCCEEEEecCCcHHHHHHHHHHHH-cC-CEEEEEeCChhhHHHHHHHcCCCeeEecCCchh
Q 019332 135 MPGMTAYAGFYEV--CSPKQGECVFISAASGAVGQLVGQFAKL-LG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD 210 (342)
Q Consensus 135 ~~~~ta~~al~~~--~~~~~~~~vlI~ga~g~vG~~ai~la~~-~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 210 (342)
.+++++++++... ..+++|++|||+|+ |++|++++|+++. .| ++|++++++++|++.++ +.+.+..++ +
T Consensus 144 ~~~~~a~~a~~~~~~~~~~~g~~VlV~G~-G~vGl~~~~~a~~~~g~~~vi~~~~~~~k~~~a~-~~~~~~~~~-----~ 216 (341)
T cd08237 144 ELVSVGVHAISRFEQIAHKDRNVIGVWGD-GNLGYITALLLKQIYPESKLVVFGKHQEKLDLFS-FADETYLID-----D 216 (341)
T ss_pred chHHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHhcCCCcEEEEeCcHhHHHHHh-hcCceeehh-----h
Confidence 7899999998543 45689999999996 9999999999986 55 48999999999999988 666543221 1
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh----hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 211 LNEALKRYFPE-GIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 211 ~~~~i~~~~~~-~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
+. .+ ++|++|||+|+ ..+..++++++++|+++.+|.... ........++.+++++.++....
T Consensus 217 ~~-------~~~g~d~viD~~G~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~g~~~~~ 283 (341)
T cd08237 217 IP-------EDLAVDHAFECVGGRGSQSAINQIIDYIRPQGTIGLMGVSEY------PVPINTRMVLEKGLTLVGSSRST 283 (341)
T ss_pred hh-------hccCCcEEEECCCCCccHHHHHHHHHhCcCCcEEEEEeecCC------CcccCHHHHhhCceEEEEecccC
Confidence 11 12 69999999994 468899999999999999997432 12334556778999988865432
Q ss_pred cccchHHHHHHHHHHHHcC-----Cceeeeeeeeccc---cHHHHHHHHHcCCccceEEEEec
Q 019332 286 YYHLYPKFLEMIIPHIKEG-----KIVYVEDMAEGLE---SAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g-----~~~~~~~~~~~l~---~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.+.++++++++.++ .+++.++.+|+++ ++.++++...++ ..||+||+++
T Consensus 284 -----~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~l~~l~~~~~a~~~~~~~-~~gKvvi~~~ 340 (341)
T cd08237 284 -----REDFERAVELLSRNPEVAEYLRKLVGGVFPVRSINDIHRAFESDLTN-SWGKTVMEWE 340 (341)
T ss_pred -----HHHHHHHHHHHHhCCcccCChHHHhccccccccHHHHHHHHHHHhhc-CcceEEEEee
Confidence 45688899999988 5667777888875 555555555544 6799999875
|
NAD-linked ribitol-5-phosphate dehydrogenase, a member of the MDR/zinc-dependent alcohol dehydrogenase-like family, oxidizes the phosphate ester of ribitol-5-phosphate to xylulose-5-phosphate of the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase ( |
| >KOG1198 consensus Zinc-binding oxidoreductase [Energy production and conversion; General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-41 Score=298.06 Aligned_cols=325 Identities=23% Similarity=0.299 Sum_probs=251.2
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-c---cccCCCCCccccc-
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-Y---VESFKPGMPISGY- 80 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~---~~p~~~G~e~~G~- 80 (342)
+++.+.+..+. +++. .+...+.|.|.+ .+++++|++.++++||.|+.++.|.... . .+|.+++++.+|+
T Consensus 4 ~~~~~~~~~~~-~~~~----~~~~~~~~iP~~-~~~~~~i~~~a~a~NpiD~~~~~g~~~~~~~~~~~p~ii~~~g~~~~ 77 (347)
T KOG1198|consen 4 KIRRVSLVSPP-GGGE----VLFSEEVPIPEP-EDGEVLIKVVAVALNPIDLKIRNGYYSPIPLGREFPGIIGRDGSGVV 77 (347)
T ss_pred ccceEEEeccC-CCcc----eEEeecccCCCC-CCCceEEEEEEeccChHHHHHHccCcCCCCCccCCCCccccccCCce
Confidence 44555555551 3332 344446777754 8999999999999999999999998733 3 4677778886665
Q ss_pred EEEEEec-CCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhc------CC
Q 019332 81 GVAKVLD-SENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVC------SP 150 (342)
Q Consensus 81 g~v~~vG-~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~------~~ 150 (342)
+.+..+| ..+..+..||.+... |+|+||.++|...++++ |+++++. ++|++|.++.|||.+|...+ ++
T Consensus 78 ~~~~~~g~~~~~~~~~g~~~~~~~~~g~~aey~v~p~~~~~~~-P~~l~~~-~aa~~p~~~~tA~~al~~~~~~~~~~~~ 155 (347)
T KOG1198|consen 78 GAVESVGDDVVGGWVHGDAVVAFLSSGGLAEYVVVPEKLLVKI-PESLSFE-EAAALPLAALTALSALFQLAPGKRSKKL 155 (347)
T ss_pred eEEeccccccccceEeeeEEeeccCCCceeeEEEcchhhccCC-CCccChh-hhhcCchHHHHHHHHHHhcccccccccc
Confidence 5555566 446678888888776 89999999999999999 9995554 48899999999999999988 89
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
++|++|||+||+|++|++++|+|+..|+..++++.++++.++++ ++|+++++||+++ ++.+++++.+.++||+||||+
T Consensus 156 ~~g~~vLv~ggsggVG~~aiQlAk~~~~~~v~t~~s~e~~~l~k-~lGAd~vvdy~~~-~~~e~~kk~~~~~~DvVlD~v 233 (347)
T KOG1198|consen 156 SKGKSVLVLGGSGGVGTAAIQLAKHAGAIKVVTACSKEKLELVK-KLGADEVVDYKDE-NVVELIKKYTGKGVDVVLDCV 233 (347)
T ss_pred CCCCeEEEEeCCcHHHHHHHHHHHhcCCcEEEEEcccchHHHHH-HcCCcEeecCCCH-HHHHHHHhhcCCCccEEEECC
Confidence 99999999999999999999999999964455555788889999 9999999999998 999999999844999999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHh---cceeeeccee-cccccchHHHHHHHHHHHHcCCc
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVT---KRVRMEGFLV-RDYYHLYPKFLEMIIPHIKEGKI 306 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~g~~ 306 (342)
|+......+.++...|+...++...+......... ....... ....+.+... ........+.++.+.+++..+++
T Consensus 234 g~~~~~~~~~~l~~~g~~~~i~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~l~~~ie~gki 312 (347)
T KOG1198|consen 234 GGSTLTKSLSCLLKGGGGAYIGLVGDELANYKLDD-LWQSANGIKLYSLGLKGVNYRWLYFVPSAEYLKALVELIEKGKI 312 (347)
T ss_pred CCCccccchhhhccCCceEEEEecccccccccccc-chhhhhhhhheeeeeeccceeeeeecCCHHHHHHHHHHHHcCcc
Confidence 99888899999999987666665443322111110 0001111 1111111111 11133447889999999999999
Q ss_pred eeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 307 VYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 307 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
++.+.+.||++++.+|++.+.++...||+++.++.
T Consensus 313 kp~i~~~~p~~~~~ea~~~~~~~~~~GK~vl~~~~ 347 (347)
T KOG1198|consen 313 KPVIDSVYPFSQAKEAFEKLEKSHATGKVVLEKDV 347 (347)
T ss_pred cCCcceeeeHHHHHHHHHHHhhcCCcceEEEEecC
Confidence 99999999999999999999999999999998763
|
|
| >TIGR02819 fdhA_non_GSH formaldehyde dehydrogenase, glutathione-independent | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-41 Score=304.22 Aligned_cols=313 Identities=18% Similarity=0.186 Sum_probs=236.4
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCC----CCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVP----KGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYG 81 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~----~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g 81 (342)
.|||+++..+ + ++++++.+.|.|.+ ++++||||||.++|||++|++.+.|... ..+|.++|||++|
T Consensus 2 ~mka~v~~~~--~-----~~~~~e~~~P~~~~~~~~~~~~eVlVkv~a~gIcgsD~~~~~g~~~-~~~p~i~GhE~~G-- 71 (393)
T TIGR02819 2 GNRGVVYLGP--G-----KVEVQDIDYPKLELPDGRKCEHGVILKVVTTNICGSDQHMVRGRTT-APTGLVLGHEITG-- 71 (393)
T ss_pred CceEEEEecC--C-----ceeEEeccCCcccCCCccCCCCeEEEEEEEeeecHHHHHHHCCCCC-CCCCccccceeEE--
Confidence 4689988766 3 35676655553311 1379999999999999999999887542 3468999999776
Q ss_pred EEEEecCCCCCCCCCCEEEe----------------------------------------ccccceeEeecCC--cceee
Q 019332 82 VAKVLDSENPEFKKGDLVWG----------------------------------------MTGWEEYSLVTAP--QLFKI 119 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~----------------------------------------~g~~~~~~~v~~~--~~~~i 119 (342)
+|+++|++|++|++||||+. .|+|+||+.++.. .++++
T Consensus 72 ~V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~l~~v 151 (393)
T TIGR02819 72 EVIEKGRDVEFIKIGDIVSVPFNIACGRCRNCKEGHTGVCLNVNPARAGAAYGYVDMGGWVGGQSEYVMVPYADFNLLKF 151 (393)
T ss_pred EEEEEcCccccccCCCEEEEecccCCCCChHHHCcCcccCcCCCCCCccceecccccCCCCCceEEEEEechhhCceEEC
Confidence 99999999999999999954 1689999999974 69999
Q ss_pred cCCCCCcc---chhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEE-EEEeCChhhHHHHHH
Q 019332 120 QHTDVPLS---YYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV-VGSAGSKDKIDLLKN 195 (342)
Q Consensus 120 ~p~~~~~~---~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~V-i~~~~s~~~~~~~~~ 195 (342)
|++++.. ..++++..++.+||+++. .++++++++|||.| +|++|++++|+|+..|+++ ++++++++|+++++
T Consensus 152 -P~~~~~~~~~~~~a~l~~~~~ta~~a~~-~~~~~~g~~VlV~G-~G~iG~~aiqlAk~~Ga~~vi~~d~~~~r~~~a~- 227 (393)
T TIGR02819 152 -PDRDQALEKIRDLTMLSDIFPTGYHGAV-TAGVGPGSTVYIAG-AGPVGLAAAASAQLLGAAVVIVGDLNPARLAQAR- 227 (393)
T ss_pred -CCcccccccccceeeeccHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHH-
Confidence 8874321 125677888999999984 57899999999976 5999999999999999964 44566788999999
Q ss_pred HcCCCeeEecC-CchhHHHHHHHHCCC-CccEEEeCCChh---------------hHHHHHHhhhhCCEEEEEceec-cc
Q 019332 196 KFGFDEAFNYK-EEPDLNEALKRYFPE-GIDIYFENVGGK---------------MLDAVLLNMKIHGRIAVCGMIS-QY 257 (342)
Q Consensus 196 ~~g~~~v~~~~-~~~~~~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~~-~~ 257 (342)
++|++. +++. +. ++.+.+.+.+++ ++|++|||+|.. .+..++++++++|+++.+|... +.
T Consensus 228 ~~Ga~~-v~~~~~~-~~~~~v~~~~~~~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~i~~~G~~~~~~ 305 (393)
T TIGR02819 228 SFGCET-VDLSKDA-TLPEQIEQILGEPEVDCAVDCVGFEARGHGHDGKKEAPATVLNSLMEVTRVGGAIGIPGLYVTED 305 (393)
T ss_pred HcCCeE-EecCCcc-cHHHHHHHHcCCCCCcEEEECCCCccccccccccccchHHHHHHHHHHhhCCCEEEEeeecCCcc
Confidence 899974 5543 34 677788888876 899999999974 7899999999999999999863 21
Q ss_pred cCCC------CccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee--ee-eeeccccHHHHHHHHHc
Q 019332 258 NLDR------PEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--ED-MAEGLESAPATLIGLFS 328 (342)
Q Consensus 258 ~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~-~~~~l~~~~~a~~~~~~ 328 (342)
.... ............+++++.+... ...++..++++++.+|++++. +. .+|+|+++++|++.+.+
T Consensus 306 ~~~~~~~~~~~~~~i~~~~~~~~~~~i~g~~~-----~~~~~~~~~~~~~~~g~i~~~~~i~~~~~~l~~~~~a~~~~~~ 380 (393)
T TIGR02819 306 PGAVDAAAKTGSLSIRFGLGWAKSHSFHTGQT-----PVMKYNRNLMQAILHDRVQIAKAVNVTVISLDDAPEGYAEFDA 380 (393)
T ss_pred cccccccccccccccchHHhhccCceEEeccC-----ChhhhHHHHHHHHHcCCCCHHHceecceecHHHHHHHHHHHhh
Confidence 1000 0111122333445555554211 113445679999999998753 44 57899999999999988
Q ss_pred CCccceEEEEec
Q 019332 329 GRNVGKQVVAVA 340 (342)
Q Consensus 329 ~~~~gkvvv~~~ 340 (342)
+. .+|+++.++
T Consensus 381 ~~-~~Kvvi~~~ 391 (393)
T TIGR02819 381 GA-AKKFVIDPH 391 (393)
T ss_pred CC-ceEEEEeCC
Confidence 75 489999864
|
Members of this family represent a distinct clade within the larger family of zinc-dependent dehydrogenases of medium chain alcohols, a family that also includes the so-called glutathione-dependent formaldehyde dehydrogenase. Members of this protein family have a tightly bound NAD that can act as a true cofactor, rather than a cosubstrate in dehydrogenase reactions, in dismutase reactions for some aldehydes. The name given to this family, however, is formaldehyde dehydrogenase, glutathione-independent. |
| >cd08230 glucose_DH Glucose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-41 Score=303.24 Aligned_cols=302 Identities=18% Similarity=0.167 Sum_probs=231.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC---ccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS---YVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~---~~~p~~~G~e~~G~g~v 83 (342)
|||+++... + + + +++++ +|.| +++++||||||+++|+|++|++.+.|..+. ..+|.++|||++| +|
T Consensus 1 mka~~~~~~--~-~--~-l~~~~--~p~p-~~~~~evlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~i~G~e~~G--~V 69 (355)
T cd08230 1 MKAIAVKPG--K-P--G-VRVVD--IPEP-EPTPGEVLVRTLEVGVCGTDREIVAGEYGTAPPGEDFLVLGHEALG--VV 69 (355)
T ss_pred CceeEecCC--C-C--C-CeEEe--CCCC-CCCCCeEEEEEEEEEeccccHHHHcCCCCCCCCCCCCeeeccccce--EE
Confidence 478888743 2 3 1 56665 5555 458999999999999999999999886422 2357899999666 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------cccceeEeecCCcceeecCCCCCccchh
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYT 130 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~ 130 (342)
+++|++ +.|++||+|++. |+|+||++++++.++++ |++ ++ ++
T Consensus 70 ~~vG~~-~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~g~~~~~G~~aey~~~~~~~~~~~-P~~--~~-~~ 144 (355)
T cd08230 70 EEVGDG-SGLSPGDLVVPTVRRPPGKCLNCRIGRPDFCETGEYTERGIKGLHGFMREYFVDDPEYLVKV-PPS--LA-DV 144 (355)
T ss_pred EEecCC-CCCCCCCEEEeccccCCCcChhhhCcCcccCCCcceeccCcCCCCccceeEEEeccccEEEC-CCC--CC-cc
Confidence 999999 999999999752 67999999999999999 999 44 45
Q ss_pred hccCCchhhHHHhhhhh------cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCe
Q 019332 131 GILGMPGMTAYAGFYEV------CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDE 201 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~------~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~ 201 (342)
+++..++.+++.++... .++++|++|+|+|+ |++|++++|+|+..|++|+++++ +++|++.++ ++|++.
T Consensus 145 a~~~~p~~~~~~a~~~~~~~~~~~~~~~g~~vlI~G~-G~vG~~a~q~ak~~G~~vi~~~~~~~~~~~~~~~~-~~Ga~~ 222 (355)
T cd08230 145 GVLLEPLSVVEKAIEQAEAVQKRLPTWNPRRALVLGA-GPIGLLAALLLRLRGFEVYVLNRRDPPDPKADIVE-ELGATY 222 (355)
T ss_pred eeecchHHHHHHHHHHHhhhhhhcccCCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecCCCCHHHHHHHH-HcCCEE
Confidence 66667777766555322 23578999999996 99999999999999999999987 678889888 999976
Q ss_pred eEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccc-cCCCCccccchHHHHhcceeee
Q 019332 202 AFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQY-NLDRPEGVHNLMYLVTKRVRME 279 (342)
Q Consensus 202 v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 279 (342)
+++.+. ++.+ .+ ..+++|++|||+|+ ..+..++++++++|+++.+|...+. ....+. ......++.+++++.
T Consensus 223 -v~~~~~-~~~~-~~--~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~-~~~~~~~~~k~~~i~ 296 (355)
T cd08230 223 -VNSSKT-PVAE-VK--LVGEFDLIIEATGVPPLAFEALPALAPNGVVILFGVPGGGREFEVDG-GELNRDLVLGNKALV 296 (355)
T ss_pred -ecCCcc-chhh-hh--hcCCCCEEEECcCCHHHHHHHHHHccCCcEEEEEecCCCCCccccCh-hhhhhhHhhcCcEEE
Confidence 566654 5544 22 22379999999998 6789999999999999999986542 110000 001345677899988
Q ss_pred cceecccccchHHHHHHHHHHHHcCC------ceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 280 GFLVRDYYHLYPKFLEMIIPHIKEGK------IVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 280 ~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
|+.... .+.++++++++.++. +++.+..+|+++++.+|++.+.++. +|+||++
T Consensus 297 g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~--~K~v~~~ 355 (355)
T cd08230 297 GSVNAN-----KRHFEQAVEDLAQWKYRWPGVLERLITRRVPLEEFAEALTEKPDGE--IKVVIEW 355 (355)
T ss_pred EecCCc-----hhhHHHHHHHHHhcccccccchHHheeeeecHHHHHHHHHhcccCC--eEEEeeC
Confidence 875433 345677888887765 5666788899999999999887654 5999864
|
Glucose dehydrogenase (GlcDH), a member of the medium chain dehydrogenase/zinc-dependent alcohol dehydrogenase-like family, catalyzes the NADP(+)-dependent oxidation of glucose to gluconate, the first step in the Entner-Doudoroff pathway, an alternative to or substitute for glycolysis or the pentose phosphate pathway. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossman fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contai |
| >cd08231 MDR_TM0436_like Hypothetical enzyme TM0436 resembles the zinc-dependent alcohol dehydrogenases (ADH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.4e-40 Score=300.53 Aligned_cols=306 Identities=18% Similarity=0.189 Sum_probs=246.6
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEec
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG 87 (342)
||+++.++ +.+ +++++. |.| .++++||+|||.++++|++|+..+.|..+...+|.++|||++| +|+++|
T Consensus 2 ka~~~~~~--~~~----l~~~~~--~~p-~~~~~evlV~v~a~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G--~V~~vG 70 (361)
T cd08231 2 RAAVLTGP--GKP----LEIREV--PLP-DLEPGAVLVRVRLAGVCGSDVHTVAGRRPRVPLPIILGHEGVG--RVVALG 70 (361)
T ss_pred eEEEEcCC--CCC----CEEEec--cCC-CCCCCeEEEEEEEEeecCccHHHhcCCCCCCCCCcccccCCce--EEEEeC
Confidence 68888888 533 567664 545 4589999999999999999999888765434568899999776 999999
Q ss_pred CCCCC------CCCCCEEEec-------------------------------------cccceeEeecCC-cceeecCCC
Q 019332 88 SENPE------FKKGDLVWGM-------------------------------------TGWEEYSLVTAP-QLFKIQHTD 123 (342)
Q Consensus 88 ~~v~~------~~vGd~V~~~-------------------------------------g~~~~~~~v~~~-~~~~i~p~~ 123 (342)
+++++ |++||+|+++ |+|++|+.++.+ .++++ |++
T Consensus 71 ~~v~~~~~~~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~c~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~~~~~l-P~~ 149 (361)
T cd08231 71 GGVTTDVAGEPLKVGDRVTWSVGAPCGRCYRCLVGDPTKCENRKKYGHEASCDDPHLSGGYAEHIYLPPGTAIVRV-PDN 149 (361)
T ss_pred CCccccccCCccCCCCEEEEcccCCCCCChhHhCcCccccccchhccccccccCCCCCcccceEEEecCCCceEEC-CCC
Confidence 99986 9999999875 789999999996 69999 998
Q ss_pred CCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCee
Q 019332 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEA 202 (342)
Q Consensus 124 ~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v 202 (342)
++.. +++.++++++|||+++......+++++|||+| +|++|++++++|+..|+ +|+++++++++.++++ ++|++.+
T Consensus 150 ~~~~-~aa~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~v 226 (361)
T cd08231 150 VPDE-VAAPANCALATVLAALDRAGPVGAGDTVVVQG-AGPLGLYAVAAAKLAGARRVIVIDGSPERLELAR-EFGADAT 226 (361)
T ss_pred CCHH-HHHHhcCHHHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HcCCCeE
Confidence 4333 26677799999999997777777999999998 59999999999999999 9999999999999998 8999888
Q ss_pred EecCCchh---HHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhccee
Q 019332 203 FNYKEEPD---LNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVR 277 (342)
Q Consensus 203 ~~~~~~~~---~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 277 (342)
+++++. + +...+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... .........++.++++
T Consensus 227 i~~~~~-~~~~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~ 301 (361)
T cd08231 227 IDIDEL-PDPQRRAIVRDITGGRGADVVIEASGHPAAVPEGLELLRRGGTYVLVGSVAPA----GTVPLDPERIVRKNLT 301 (361)
T ss_pred EcCccc-ccHHHHHHHHHHhCCCCCcEEEECCCChHHHHHHHHHhccCCEEEEEcCCCCC----CccccCHHHHhhcccE
Confidence 888754 3 33567888876 89999999987 6788999999999999999875421 0112233456778888
Q ss_pred eecceecccccchHHHHHHHHHHHHcC--C--ceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 278 MEGFLVRDYYHLYPKFLEMIIPHIKEG--K--IVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 278 ~~~~~~~~~~~~~~~~~~~~~~~~~~g--~--~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+.++.... .+.++++++++.++ . +...+..+|+++++++|++.+.++.. +|+||++
T Consensus 302 ~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~i~~~~~l~~~~~a~~~~~~~~~-~k~vi~~ 361 (361)
T cd08231 302 IIGVHNYD-----PSHLYRAVRFLERTQDRFPFAELVTHRYPLEDINEALELAESGTA-LKVVIDP 361 (361)
T ss_pred EEEcccCC-----chhHHHHHHHHHhccCcCCchhheeeeeeHHHHHHHHHHHHcCCc-eEEEeCC
Confidence 88776543 44567777777776 3 34456778899999999999988764 7999863
|
This group contains the hypothetical TM0436 alcohol dehydrogenase from Thermotoga maritima, proteins annotated as 5-exo-alcohol dehydrogenase, and other members of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family. MDR, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quino |
| >cd08246 crotonyl_coA_red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.7e-40 Score=300.69 Aligned_cols=316 Identities=18% Similarity=0.224 Sum_probs=254.3
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC----------CccccCCC
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG----------SYVESFKP 73 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~----------~~~~p~~~ 73 (342)
|.+|||+++.....|.|. +.+++++ +|.| ++++++|+||+.++++|++|++.+.+... ...++.++
T Consensus 10 ~~~~~a~~~~~~~~g~~~-~~~~~~~--~~~p-~l~~~evlI~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~ 85 (393)
T cd08246 10 PEKMYAFAIRPERYGDPA-QAIQLED--VPVP-ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAARQRRGRDEPYHIG 85 (393)
T ss_pred chhhhheeeecccCCCcc-cceEEee--cCCC-CCCCCEEEEEEEEEeeccchhhhhcCCCccccccccccCCCCCcccc
Confidence 567899988643225552 3456655 4555 56999999999999999999987766410 11233588
Q ss_pred CCcccccEEEEEecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCC
Q 019332 74 GMPISGYGVAKVLDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHT 122 (342)
Q Consensus 74 G~e~~G~g~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~ 122 (342)
|||++| +|+++|++++.+++||+|+++ |+|++|+.++...++++ |+
T Consensus 86 G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~~g~~a~y~~v~~~~l~~i-P~ 162 (393)
T cd08246 86 GSDASG--IVWAVGEGVKNWKVGDEVVVHCSVWDGNDPERAGGDPMFDPSQRIWGYETNYGSFAQFALVQATQLMPK-PK 162 (393)
T ss_pred ccceEE--EEEEeCCCCCcCCCCCEEEEeccccccCcccccccccccccccccccccCCCCcceeEEEechHHeEEC-CC
Confidence 999776 999999999999999999874 78999999999999999 99
Q ss_pred CCCccchhhccCCchhhHHHhhhhh--cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC
Q 019332 123 DVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD 200 (342)
Q Consensus 123 ~~~~~~~~a~l~~~~~ta~~al~~~--~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~ 200 (342)
+++.. +++.++++++|||+++... ++++++++|+|+|++|++|++++++|+..|++++++++++++.+.++ ++|++
T Consensus 163 ~l~~~-~aa~l~~~~~tA~~al~~~~~~~~~~g~~vlV~ga~g~iG~a~~~lak~~G~~vv~~~~s~~~~~~~~-~~G~~ 240 (393)
T cd08246 163 HLSWE-EAAAYMLVGATAYRMLFGWNPNTVKPGDNVLIWGASGGLGSMAIQLARAAGANPVAVVSSEEKAEYCR-ALGAE 240 (393)
T ss_pred CCCHH-HHhhhcccHHHHHHHHhhcccccCCCCCEEEEECCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCC
Confidence 94443 3778899999999998654 67899999999999999999999999999999999999999999998 89998
Q ss_pred eeEecCCch---------------------hHHHHHHHHCCC--CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccc
Q 019332 201 EAFNYKEEP---------------------DLNEALKRYFPE--GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 201 ~v~~~~~~~---------------------~~~~~i~~~~~~--~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
.++++++.. .+.+.+++++++ ++|++|||+|+..+..++++++++|+++.+|.....
T Consensus 241 ~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~l~~~~~g~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~ 320 (393)
T cd08246 241 GVINRRDFDHWGVLPDVNSEAYTAWTKEARRFGKAIWDILGGREDPDIVFEHPGRATFPTSVFVCDRGGMVVICAGTTGY 320 (393)
T ss_pred EEEcccccccccccccccchhhhhhhhccchHHHHHHHHhCCCCCCeEEEECCchHhHHHHHHHhccCCEEEEEcccCCC
Confidence 888864320 255677777765 699999999998889999999999999999875432
Q ss_pred cCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcC-CccceEE
Q 019332 258 NLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSG-RNVGKQV 336 (342)
Q Consensus 258 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvv 336 (342)
. .......++.++.++.+.+... .+.+.++++++.++.+.+.+..+|+++++++|++.+.++ +..||++
T Consensus 321 ~-----~~~~~~~l~~~~~~i~g~~~~~-----~~~~~~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~~gkvv 390 (393)
T cd08246 321 N-----HTYDNRYLWMRQKRIQGSHFAN-----DREAAEANRLVMKGRIDPCLSKVFSLDETPDAHQLMHRNQHHVGNMA 390 (393)
T ss_pred C-----CCCcHHHHhhheeEEEecccCc-----HHHHHHHHHHHHcCCceeeeeEEEeHHHHHHHHHHHHhCccccceEE
Confidence 1 1223445556677777765543 456788999999999987777788999999999999998 7889998
Q ss_pred EE
Q 019332 337 VA 338 (342)
Q Consensus 337 v~ 338 (342)
+-
T Consensus 391 v~ 392 (393)
T cd08246 391 VL 392 (393)
T ss_pred Ee
Confidence 74
|
Crotonyl-CoA reductase, a member of the medium chain dehydrogenase/reductase family, catalyzes the NADPH-dependent conversion of crotonyl-CoA to butyryl-CoA, a step in (2S)-methylmalonyl-CoA production for straight-chain fatty acid biosynthesis. Like enoyl reductase, another enzyme in fatty acid synthesis, crotonyl-CoA reductase is a member of the zinc-dependent alcohol dehydrogenase-like medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossma |
| >TIGR01202 bchC 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-40 Score=294.67 Aligned_cols=288 Identities=14% Similarity=0.203 Sum_probs=222.1
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecC-cccccccccCCCC---ccccCCCCCcccccE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCD-PYMRPRMTNIKGS---YVESFKPGMPISGYG 81 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~-~~d~~~~~~~~~~---~~~p~~~G~e~~G~g 81 (342)
++||+++..+ +++++++ .|.| .++++||+|||.++||| ++|++.+.|..+. ..+|.++|||++|
T Consensus 1 ~~ka~~~~~~-------~~l~~~e--~~~p-~~~~~evlVkv~~~gi~~~~D~~~~~G~~~~~~~~~~P~i~GhE~~G-- 68 (308)
T TIGR01202 1 KTQAIVLSGP-------NQIELRE--VTLT-PPSPGDLVVEIWYSGISTGTEKLFWNGLMPPFPGMGYPLVPGYESVG-- 68 (308)
T ss_pred CceEEEEeCC-------CeEEEEE--ecCC-CCCCCeEEEEEEEEeeccCchhHHhcCCCCCCCCCCCCccCcceeEE--
Confidence 4688888755 3466665 5555 45899999999999996 6998888776532 2468999999776
Q ss_pred EEEEecCCCCCCCCCCEEEe------------ccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcC
Q 019332 82 VAKVLDSENPEFKKGDLVWG------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCS 149 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~ 149 (342)
+|+++|+++ +|++||||+. .|+|+||++++++.++++ |+++ +.+++.+ .++.|||+++.+ .
T Consensus 69 ~V~~vG~~v-~~~vGdrV~~~~~~c~~~~~~~~G~~aey~~v~~~~~~~i-p~~~--~~~~a~~-~~~~~a~~~~~~-~- 141 (308)
T TIGR01202 69 RVVEAGPDT-GFRPGDRVFVPGSNCYEDVRGLFGGASKRLVTPASRVCRL-DPAL--GPQGALL-ALAATARHAVAG-A- 141 (308)
T ss_pred EEEEecCCC-CCCCCCEEEEeCccccccccccCCcccceEEcCHHHceeC-CCCC--CHHHHhh-hHHHHHHHHHHh-c-
Confidence 999999998 6999999985 489999999999999999 9984 4444443 457899999954 3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
..+++++||+|+ |++|++++|+|+.+|++ |+++..++++++.+. ++ .++|+.+ . .++++|++||
T Consensus 142 ~~~~~~vlV~G~-G~vG~~a~q~ak~~G~~~v~~~~~~~~rl~~a~-~~---~~i~~~~--~--------~~~g~Dvvid 206 (308)
T TIGR01202 142 EVKVLPDLIVGH-GTLGRLLARLTKAAGGSPPAVWETNPRRRDGAT-GY---EVLDPEK--D--------PRRDYRAIYD 206 (308)
T ss_pred ccCCCcEEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHhhh-hc---cccChhh--c--------cCCCCCEEEE
Confidence 346889999985 99999999999999996 555666666665554 33 3454422 1 1237999999
Q ss_pred CCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCce
Q 019332 229 NVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV 307 (342)
Q Consensus 229 ~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 307 (342)
|+|+ ..+..++++++++|+++.+|..... ...+...++.+++++.+..... .+.++++++++.+|.++
T Consensus 207 ~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~~~~~i~~~~~~~-----~~~~~~~~~l~~~g~i~ 275 (308)
T TIGR01202 207 ASGDPSLIDTLVRRLAKGGEIVLAGFYTEP------VNFDFVPAFMKEARLRIAAEWQ-----PGDLHAVRELIESGALS 275 (308)
T ss_pred CCCCHHHHHHHHHhhhcCcEEEEEeecCCC------cccccchhhhcceEEEEecccc-----hhHHHHHHHHHHcCCCC
Confidence 9999 5789999999999999999975421 1233445667788877654332 56789999999999998
Q ss_pred e--eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 308 Y--VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 308 ~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+ .++.+|||+++++|++.+.++...+|++++
T Consensus 276 ~~~~it~~~~l~~~~~A~~~~~~~~~~~Kv~~~ 308 (308)
T TIGR01202 276 LDGLITHQRPASDAAEAYMTAFSDPDCLKMILD 308 (308)
T ss_pred hhhccceeecHHHHHHHHHHHhcCcCceEEEeC
Confidence 6 467788999999999998877777899874
|
|
| >cd08296 CAD_like Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-39 Score=292.68 Aligned_cols=301 Identities=21% Similarity=0.250 Sum_probs=251.2
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +.+ +++++ +|.| .+++++|+||+.++++|++|+..+.|..+...+|.++|||++| +|+++
T Consensus 1 m~a~~~~~~--~~~----~~~~~--~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G--~v~~v 69 (333)
T cd08296 1 YKAVQVTEP--GGP----LELVE--RDVP-LPGPGEVLIKVEACGVCHSDAFVKEGAMPGLSYPRVPGHEVVG--RIDAV 69 (333)
T ss_pred CeEEEEccC--CCC----ceEEe--ccCC-CCCCCEEEEEEEEEecchHHHHHHhCCCCCCCCCcccCcceeE--EEEEE
Confidence 589999877 433 56654 5656 4689999999999999999998887755434567899999776 99999
Q ss_pred cCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 87 DSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 87 G~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|++++++++||+|++ .|+|++|+.++.+.++++ |++++.. +++.+++
T Consensus 70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~g~~~~c~~~~~~~~~~~g~~a~~~~v~~~~~~~l-p~~~~~~-~aa~l~~ 147 (333)
T cd08296 70 GEGVSRWKVGDRVGVGWHGGHCGTCDACRRGDFVHCENGKVTGVTRDGGYAEYMLAPAEALARI-PDDLDAA-EAAPLLC 147 (333)
T ss_pred CCCCccCCCCCEEEeccccCCCCCChhhhCcCcccCCCCCccCcccCCcceeEEEEchhheEeC-CCCCCHH-Hhhhhhh
Confidence 999999999999985 278999999999999999 9984443 3778889
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
.+.|||+++.. .+++++++|||+| +|++|++++++|+.+|++|+++++++++.+.++ ++|+++++++++. ++.+.+
T Consensus 148 ~~~ta~~~~~~-~~~~~~~~vlV~g-~g~iG~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~~~ 223 (333)
T cd08296 148 AGVTTFNALRN-SGAKPGDLVAVQG-IGGLGHLAVQYAAKMGFRTVAISRGSDKADLAR-KLGAHHYIDTSKE-DVAEAL 223 (333)
T ss_pred hhHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEeCChHHHHHHH-HcCCcEEecCCCc-cHHHHH
Confidence 99999999965 4899999999999 799999999999999999999999999999998 9999999998876 777777
Q ss_pred HHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 216 KRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
++. +++|+++|+.|. ..+..++++++++|+++.+|.... ........++.+++++.+..... ...+
T Consensus 224 ~~~--~~~d~vi~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~~~~~~~-----~~~~ 290 (333)
T cd08296 224 QEL--GGAKLILATAPNAKAISALVGGLAPRGKLLILGAAGE------PVAVSPLQLIMGRKSIHGWPSGT-----ALDS 290 (333)
T ss_pred Hhc--CCCCEEEECCCchHHHHHHHHHcccCCEEEEEecCCC------CCCcCHHHHhhcccEEEEeCcCC-----HHHH
Confidence 765 369999999874 788899999999999999987542 11234455668899988875433 4567
Q ss_pred HHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+.+++++.++.+++.+ ..++++++.+|++.+.+++..||+|++
T Consensus 291 ~~~~~~~~~~~l~~~v-~~~~~~~~~~a~~~~~~~~~~gk~v~~ 333 (333)
T cd08296 291 EDTLKFSALHGVRPMV-ETFPLEKANEAYDRMMSGKARFRVVLT 333 (333)
T ss_pred HHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHCCCCceeEEeC
Confidence 7888889899888765 468999999999999999999999874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catal |
| >TIGR02817 adh_fam_1 zinc-binding alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-39 Score=293.02 Aligned_cols=310 Identities=17% Similarity=0.216 Sum_probs=245.5
Q ss_pred cEEEEeccc-CCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 8 KQVILKDYV-SGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 8 ~a~~~~~~~-~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||++.++. .|.| +.++ ..++|.| +++++||+||+.++++|+.|+..+.+..+...+|.++|+|++| +|+++
T Consensus 1 ~~~~~~~~~~~~~~--~~~~--~~~~~~p-~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~V~~v 73 (336)
T TIGR02817 1 KAVGYKKPLPITDP--DALV--DIDLPKP-KPGGRDLLVEVKAISVNPVDTKVRARMAPEAGQPKILGWDAAG--VVVAV 73 (336)
T ss_pred CceeeccccCCCCc--ccce--ecccCCC-CCCCCEEEEEEEEEEcChHHHHHHcCCCCCCCCCcccceeeEE--EEEEe
Confidence 577887751 1333 3344 4456666 4699999999999999999998887754444567899999776 99999
Q ss_pred cCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCC-----CCE
Q 019332 87 DSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQ-----GEC 155 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~-----~~~ 155 (342)
|++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++++++|||+++....++++ +++
T Consensus 74 G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~g~~ 151 (336)
T TIGR02817 74 GDEVTLFKPGDEVWYAGDIDRPGSNAEFHLVDERIVGHK-PKSLSFA-EAAALPLTSITAWELLFDRLGINDPVAGDKRA 151 (336)
T ss_pred CCCCCCCCCCCEEEEcCCCCCCCcccceEEEcHHHcccC-CCCCCHH-HHhhhhHHHHHHHHHHHHhcCCCCCCCCCCCE
Confidence 9999999999999986 68999999999999999 9994443 378899999999999987788887 999
Q ss_pred EEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-h
Q 019332 156 VFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-K 233 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~ 233 (342)
|||+|++|++|++++|+|+.+ |++|+++++++++.+.++ ++|+++++++.. ++.+.+++...+++|+++|+.++ .
T Consensus 152 vlV~ga~g~vg~~~~~~ak~~~G~~vi~~~~~~~~~~~l~-~~g~~~~~~~~~--~~~~~i~~~~~~~vd~vl~~~~~~~ 228 (336)
T TIGR02817 152 LLIIGGAGGVGSILIQLARQLTGLTVIATASRPESQEWVL-ELGAHHVIDHSK--PLKAQLEKLGLEAVSYVFSLTHTDQ 228 (336)
T ss_pred EEEEcCCcHHHHHHHHHHHHhCCCEEEEEcCcHHHHHHHH-HcCCCEEEECCC--CHHHHHHHhcCCCCCEEEEcCCcHH
Confidence 999999999999999999998 999999999999999998 899999998764 67777877544489999999865 8
Q ss_pred hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec--c-c--ccch--HHHHHHHHHHHHcCCc
Q 019332 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR--D-Y--YHLY--PKFLEMIIPHIKEGKI 306 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~-~--~~~~--~~~~~~~~~~~~~g~~ 306 (342)
.+...+++++++|+++.++... ......+..+++++....+. . . ++.. ...++++++++.++.+
T Consensus 229 ~~~~~~~~l~~~G~~v~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l 299 (336)
T TIGR02817 229 HFKEIVELLAPQGRFALIDDPA---------ELDISPFKRKSISLHWEFMFTRSMFQTADMIEQHHLLNRVARLVDAGKI 299 (336)
T ss_pred HHHHHHHHhccCCEEEEEcccc---------cccchhhhhcceEEEEEEeecccccchhhhhhhHHHHHHHHHHHHCCCe
Confidence 8899999999999999875321 11222333444555443222 1 0 1111 2568889999999999
Q ss_pred eeeeeeee---ccccHHHHHHHHHcCCccceEEEE
Q 019332 307 VYVEDMAE---GLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 307 ~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
++.+...+ +++++.+|++.+.+++..||+++.
T Consensus 300 ~~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 334 (336)
T TIGR02817 300 RTTLAETFGTINAANLKRAHALIESGKARGKIVLE 334 (336)
T ss_pred eccchhccCCCCHHHHHHHHHHHHcCCccceEEEe
Confidence 87655555 478999999999999988999875
|
Members of this model form a distinct subset of the larger family of oxidoreductases that includes zinc-binding alcohol dehydrogenases and NADPH:quinone reductases (pfam00107). While some current members of this family carry designations as putative alginate lyase, it seems no sequence with a direct characterization as such is detected by this model. |
| >cd08290 ETR 2-enoyl thioester reductase (ETR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-39 Score=293.43 Aligned_cols=317 Identities=24% Similarity=0.272 Sum_probs=257.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCC-CcEEEEEEeeecCcccccccccCCCCc-c----ccCCCCCccccc
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGS-NGVLLKNLYLSCDPYMRPRMTNIKGSY-V----ESFKPGMPISGY 80 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~-~~VlIkv~~~~i~~~d~~~~~~~~~~~-~----~p~~~G~e~~G~ 80 (342)
||||++.+. |.|. +.+.+++ +|.|. +.+ ++|+||+.++++|++|+..+.|..+.. . .|.++|||++|
T Consensus 1 ~~a~~~~~~--~~~~-~~~~~~~--~~~p~-~~~~~~v~v~v~~~gi~~~d~~~~~g~~~~~~~~~~~~~~~~g~e~~G- 73 (341)
T cd08290 1 AKALVYTEH--GEPK-EVLQLES--YEIPP-PGPPNEVLVKMLAAPINPADINQIQGVYPIKPPTTPEPPAVGGNEGVG- 73 (341)
T ss_pred CceEEEccC--CCch-hheEEee--cCCCC-CCCCCEEEEEEEecCCCHHHHHHhcCcCCCCCcccCCCCCCCCcceEE-
Confidence 689999888 7663 4456655 55554 456 999999999999999998887754321 2 56789999776
Q ss_pred EEEEEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEE
Q 019332 81 GVAKVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECV 156 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~v 156 (342)
+|+++|+++..+++||+|++. |+|++|+.++.+.++++ |++++.. +++.+++.++|||+++...++++++++|
T Consensus 74 -~V~~vG~~v~~~~~Gd~V~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~v 150 (341)
T cd08290 74 -EVVKVGSGVKSLKPGDWVIPLRPGLGTWRTHAVVPADDLIKV-PNDVDPE-QAATLSVNPCTAYRLLEDFVKLQPGDWV 150 (341)
T ss_pred -EEEEeCCCCCCCCCCCEEEecCCCCccchheEeccHHHeEeC-CCCCCHH-HHHHhhccHHHHHHHHHhhcccCCCCEE
Confidence 999999999999999999986 89999999999999999 9984433 3788899999999999777889999999
Q ss_pred EEecCCcHHHHHHHHHHHHcCCEEEEEeCCh----hhHHHHHHHcCCCeeEecCCc--hhHHHHHHHHCCCCccEEEeCC
Q 019332 157 FISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKIDLLKNKFGFDEAFNYKEE--PDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~----~~~~~~~~~~g~~~v~~~~~~--~~~~~~i~~~~~~~~d~vid~~ 230 (342)
||+|++|++|++++|+|++.|++|+++++++ ++.+.++ ++|++++++++.. .++.+.++..+++++|++|||.
T Consensus 151 lI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~~~~~~~i~~~~~~~~d~vld~~ 229 (341)
T cd08290 151 IQNGANSAVGQAVIQLAKLLGIKTINVVRDRPDLEELKERLK-ALGADHVLTEEELRSLLATELLKSAPGGRPKLALNCV 229 (341)
T ss_pred EEccchhHHHHHHHHHHHHcCCeEEEEEcCCCcchhHHHHHH-hcCCCEEEeCcccccccHHHHHHHHcCCCceEEEECc
Confidence 9999999999999999999999999998876 5678887 8999998887651 0356667766655799999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCC
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~ 305 (342)
|+..+..++++++++|+++.+|..... .........+.+++++.+.....+ +......++.+++++.++.
T Consensus 230 g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 304 (341)
T cd08290 230 GGKSATELARLLSPGGTMVTYGGMSGQ-----PVTVPTSLLIFKDITLRGFWLTRWLKRANPEEKEDMLEELAELIREGK 304 (341)
T ss_pred CcHhHHHHHHHhCCCCEEEEEeccCCC-----CcccCHHHHhhCCceEEEEecHHHHhhcCHHHHHHHHHHHHHHHHcCC
Confidence 997788899999999999999864332 112233455778888888765432 2233456888999999999
Q ss_pred ceeeeeeee---ccccHHHHHHHHHcCCccceEEEEe
Q 019332 306 IVYVEDMAE---GLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 306 ~~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+.+.+..++ +++++.++++.+.+++..||+|+++
T Consensus 305 l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~k~v~~~ 341 (341)
T cd08290 305 LKAPPVEKVTDDPLEEFKDALANALKGGGGGKQVLVM 341 (341)
T ss_pred ccCCcccccccCCHHHHHHHHHHHhhcCCCCeEEEeC
Confidence 988766677 9999999999999998889999874
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann f |
| >COG1063 Tdh Threonine dehydrogenase and related Zn-dependent dehydrogenases [Amino acid transport and metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.9e-39 Score=289.56 Aligned_cols=291 Identities=22% Similarity=0.189 Sum_probs=236.4
Q ss_pred ccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccC-CCCCcccccEEEEEecCCCCCCCCCCEEEec--------
Q 019332 32 IELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESF-KPGMPISGYGVAKVLDSENPEFKKGDLVWGM-------- 102 (342)
Q Consensus 32 ~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~-~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~-------- 102 (342)
.+.| .+++++|+|||.++|||.+|++.+.+..+....|. ++|||++| +|+++| .++.+++||||+..
T Consensus 18 ~~~p-~~~p~~vlVkv~~~gICGSDlh~~~g~~~~~~~~~~i~GHE~~G--~V~evG-~~~~~~~GdrVvv~~~~~Cg~C 93 (350)
T COG1063 18 PPPP-IPGPGDVLIRVTATGICGSDLHIYRGGEPFVPPGDIILGHEFVG--EVVEVG-VVRGFKVGDRVVVEPNIPCGHC 93 (350)
T ss_pred CCCC-CCCCCeEEEEEEEEeEchhhhhhccCCCCCCCCCCcccCccceE--EEEEec-cccCCCCCCEEEECCCcCCCCC
Confidence 4433 45899999999999999999999999765555555 99999887 999999 77889999999832
Q ss_pred ---------------------------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCE
Q 019332 103 ---------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGEC 155 (342)
Q Consensus 103 ---------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~ 155 (342)
|+|+||+.+|.+.++++.|++ ++.+.+++..++.+++++........++++
T Consensus 94 ~~C~~G~~~~C~~~~~~g~~~~~~~~~G~~aEyv~vp~~~~~~~~pd~--~~~~~aal~epla~~~~~~a~~~~~~~~~~ 171 (350)
T COG1063 94 RYCRAGEYNLCENPGFYGYAGLGGGIDGGFAEYVRVPADFNLAKLPDG--IDEEAAALTEPLATAYHGHAERAAVRPGGT 171 (350)
T ss_pred hhHhCcCcccCCCccccccccccCCCCCceEEEEEeccccCeecCCCC--CChhhhhhcChhhhhhhhhhhccCCCCCCE
Confidence 589999999986655542776 355689999999999777545555666669
Q ss_pred EEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh-
Q 019332 156 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG- 232 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~- 232 (342)
|+|+|+ |++|++++++++..|+ +|++++.+++|++++++..|++.+++..+. +....+.+.+++ ++|++|||+|.
T Consensus 172 V~V~Ga-GpIGLla~~~a~~~Ga~~Viv~d~~~~Rl~~A~~~~g~~~~~~~~~~-~~~~~~~~~t~g~g~D~vie~~G~~ 249 (350)
T COG1063 172 VVVVGA-GPIGLLAIALAKLLGASVVIVVDRSPERLELAKEAGGADVVVNPSED-DAGAEILELTGGRGADVVIEAVGSP 249 (350)
T ss_pred EEEECC-CHHHHHHHHHHHHcCCceEEEeCCCHHHHHHHHHhCCCeEeecCccc-cHHHHHHHHhCCCCCCEEEECCCCH
Confidence 999997 9999999999999998 899999999999999933677766666664 677888888988 99999999998
Q ss_pred hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee--e
Q 019332 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--E 310 (342)
Q Consensus 233 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~ 310 (342)
..+..++++++++|+++.+|...... .......++.+++++.|+.... ....++.+++++.+|++.+. +
T Consensus 250 ~~~~~ai~~~r~gG~v~~vGv~~~~~-----~~~~~~~~~~kel~l~gs~~~~----~~~~~~~~~~ll~~g~i~~~~li 320 (350)
T COG1063 250 PALDQALEALRPGGTVVVVGVYGGED-----IPLPAGLVVSKELTLRGSLRPS----GREDFERALDLLASGKIDPEKLI 320 (350)
T ss_pred HHHHHHHHHhcCCCEEEEEeccCCcc-----CccCHHHHHhcccEEEeccCCC----CcccHHHHHHHHHcCCCChhHce
Confidence 67899999999999999999876531 1345778889999999973311 14568889999999999975 3
Q ss_pred eeeeccccHHHHHHHHHcCCc-cceEEEEe
Q 019332 311 DMAEGLESAPATLIGLFSGRN-VGKQVVAV 339 (342)
Q Consensus 311 ~~~~~l~~~~~a~~~~~~~~~-~gkvvv~~ 339 (342)
+..++++++++|++.+.+... ..|+++.+
T Consensus 321 t~~~~~~~~~~a~~~~~~~~~~~~Kv~i~~ 350 (350)
T COG1063 321 THRLPLDDAAEAYELFADRKEEAIKVVLKP 350 (350)
T ss_pred EeeccHHHHHHHHHHHHhcCCCeEEEEecC
Confidence 345589999999999998654 45888753
|
|
| >cd08278 benzyl_alcohol_DH Benzyl alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.2e-39 Score=291.74 Aligned_cols=310 Identities=20% Similarity=0.282 Sum_probs=253.0
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
|+|||+++.++ +.+ +++++.+.| ++++++|+||+.++++|++|++...+.++ ..+|.++|||++| +|+
T Consensus 1 ~~~~a~~~~~~--~~~----~~~~~~~~p---~~~~~~v~Vkv~a~gi~~~d~~~~~g~~~-~~~p~v~G~e~~G--~V~ 68 (365)
T cd08278 1 MKTTAAVVREP--GGP----FVLEDVELD---DPRPDEVLVRIVATGICHTDLVVRDGGLP-TPLPAVLGHEGAG--VVE 68 (365)
T ss_pred CccEEeeeccC--CCc----ceEEEeecC---CCCCCeEEEEEEEeecCcccHHHhcCCCC-CCCCcccccceeE--EEE
Confidence 46799999987 555 567665554 56899999999999999999998887653 3457899999776 999
Q ss_pred EecCCCCCCCCCCEEEe----------------------------------------------------ccccceeEeec
Q 019332 85 VLDSENPEFKKGDLVWG----------------------------------------------------MTGWEEYSLVT 112 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~----------------------------------------------------~g~~~~~~~v~ 112 (342)
++|++++++++||+|++ .|+|++|+.++
T Consensus 69 ~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~y~~v~ 148 (365)
T cd08278 69 AVGSAVTGLKPGDHVVLSFASCGECANCLSGHPAYCENFFPLNFSGRRPDGSTPLSLDDGTPVHGHFFGQSSFATYAVVH 148 (365)
T ss_pred EeCCCcccCCCCCEEEEcccCCCCChHHhCCCcccccCcccccccccccCCcccccccCCcccccccccccceeeEEEec
Confidence 99999999999999984 26899999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHH
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKID 191 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~ 191 (342)
.+.++++ |++++.. +++.+++++.||++++...++++++++|||+|+ |++|++++|+|+..|+ +|++++++++|.+
T Consensus 149 ~~~~~~i-P~~~s~~-~a~~l~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~vG~~~~~la~~~G~~~v~~~~~~~~k~~ 225 (365)
T cd08278 149 ERNVVKV-DKDVPLE-LLAPLGCGIQTGAGAVLNVLKPRPGSSIAVFGA-GAVGLAAVMAAKIAGCTTIIAVDIVDSRLE 225 (365)
T ss_pred chhEEEC-CCCCCHH-HhhhhcchhhhhhHHHhhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHH
Confidence 9999999 9995433 378899999999999888888999999999975 9999999999999999 6889989999988
Q ss_pred HHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHH
Q 019332 192 LLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMY 270 (342)
Q Consensus 192 ~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 270 (342)
.++ ++|++.++++++. ++.+.+.+.+++++|+++||+|+ ..+..++++++++|+++.+|..... .........
T Consensus 226 ~~~-~~g~~~~i~~~~~-~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~ 299 (365)
T cd08278 226 LAK-ELGATHVINPKEE-DLVAAIREITGGGVDYALDTTGVPAVIEQAVDALAPRGTLALVGAPPPG----AEVTLDVND 299 (365)
T ss_pred HHH-HcCCcEEecCCCc-CHHHHHHHHhCCCCcEEEECCCCcHHHHHHHHHhccCCEEEEeCcCCCC----CccccCHHH
Confidence 888 8999999998876 78888888873389999999997 7889999999999999999875321 112234444
Q ss_pred HHhcceeeecceecccccchHHHHHHHHHHHHcCCcee-eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 271 LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY-VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
++.+++++.++..... ...+.++++++++.++.+++ .+...++++++.+|++.+++++.. |++++
T Consensus 300 ~~~~~~~~~~~~~~~~--~~~~~~~~~~~~l~~g~l~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 365 (365)
T cd08278 300 LLVSGKTIRGVIEGDS--VPQEFIPRLIELYRQGKFPFDKLVTFYPFEDINQAIADSESGKVI-KPVLR 365 (365)
T ss_pred HhhcCceEEEeecCCc--ChHHHHHHHHHHHHcCCCChHHheEEecHHHHHHHHHHHHCCCce-EEEEC
Confidence 5577888876654321 11467788999999998865 344578999999999999887654 77763
|
Benzyl alcohol dehydrogenase is similar to liver alcohol dehydrogenase, but has some amino acid substitutions near the active site, which may determine the enzyme's specificity of oxidizing aromatic substrates. Also known as aryl-alcohol dehydrogenases, they catalyze the conversion of an aromatic alcohol + NAD+ to an aromatic aldehyde + NADH + H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononu |
| >cd08244 MDR_enoyl_red Possible enoyl reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.2e-39 Score=286.71 Aligned_cols=314 Identities=21% Similarity=0.259 Sum_probs=258.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~v 83 (342)
|||+.+.++ +.+ ..+.+.+ .+.| .+.+++|+|++.++++|++|+....|..+ ....|.++|||++| +|
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~p~~~g~e~~G--~v 71 (324)
T cd08244 1 MRAIRLHEF--GPP--EVLVPED--VPDP-VPGPGQVRIAVAAAGVHFVDTQLRSGWGPGPFPPELPYVPGGEVAG--VV 71 (324)
T ss_pred CeEEEEcCC--CCc--cceEEec--cCCC-CCCCCEEEEEEEEEeCCHHHHHHhCCCCCCCCCCCCCcCCccceEE--EE
Confidence 588998876 655 3455544 4444 46899999999999999999988776432 23446789999776 99
Q ss_pred EEecCCCCCCCCCCEEEec-----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEE
Q 019332 84 KVLDSENPEFKKGDLVWGM-----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~-----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
+++|++++.+++||+|+++ |+|++|+.++.+.++++ |+++++. +++++++.++||| ++...++++++++|+|
T Consensus 72 ~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~a~~~~~~~~ta~-~~~~~~~~~~~~~vlI 148 (324)
T cd08244 72 DAVGPGVDPAWLGRRVVAHTGRAGGGYAELAVADVDSLHPV-PDGLDLE-AAVAVVHDGRTAL-GLLDLATLTPGDVVLV 148 (324)
T ss_pred EEeCCCCCCCCCCCEEEEccCCCCceeeEEEEEchHHeEeC-CCCCCHH-HHhhhcchHHHHH-HHHHhcCCCCCCEEEE
Confidence 9999999999999999985 78999999999999999 9985444 3778899999995 5556788999999999
Q ss_pred ecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHH
Q 019332 159 SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDA 237 (342)
Q Consensus 159 ~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~ 237 (342)
+|++|++|++++++|+..|++|+++++++++.+.++ ++|++.++++++. ++.+.+.+.+++ ++|+++||+|+.....
T Consensus 149 ~g~~~~~g~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~ 226 (324)
T cd08244 149 TAAAGGLGSLLVQLAKAAGATVVGAAGGPAKTALVR-ALGADVAVDYTRP-DWPDQVREALGGGGVTVVLDGVGGAIGRA 226 (324)
T ss_pred EcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHcCCCCceEEEECCChHhHHH
Confidence 999999999999999999999999999999999997 8999888998877 788888888776 8999999999987899
Q ss_pred HHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
++++++++|+++.+|.....+ ........+.+++++.+...... ++...+.++++++++.++.+.+.+...+++
T Consensus 227 ~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~ 301 (324)
T cd08244 227 ALALLAPGGRFLTYGWASGEW-----TALDEDDARRRGVTVVGLLGVQAERGGLRALEARALAEAAAGRLVPVVGQTFPL 301 (324)
T ss_pred HHHHhccCcEEEEEecCCCCC-----CccCHHHHhhCCcEEEEeecccCCHHHHHHHHHHHHHHHHCCCccCccceEEeH
Confidence 999999999999998754321 12233455678888877665432 234456788899999999998777778899
Q ss_pred ccHHHHHHHHHcCCccceEEEEe
Q 019332 317 ESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++.+|++.+.++...||+++++
T Consensus 302 ~~~~~a~~~~~~~~~~~kvv~~~ 324 (324)
T cd08244 302 ERAAEAHAALEARSTVGKVLLLP 324 (324)
T ss_pred HHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999999999999999864
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydr |
| >cd05288 PGDH Prostaglandin dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.3e-39 Score=287.74 Aligned_cols=322 Identities=46% Similarity=0.731 Sum_probs=258.1
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGV 82 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~ 82 (342)
++|||.+.+.+.++|.++.+++++.+. | ++.+++|+||+.++++|+.|.....+... ....+.++|+|++| +
T Consensus 1 ~~~~~~~~~~~~~~~~~~~~~~~~~~~--p-~~~~~~v~Vkv~~~~i~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G--~ 75 (329)
T cd05288 1 SNRQVVLAKRPEGPPPPDDFELVEVPL--P-ELKDGEVLVRTLYLSVDPYMRGWMSDAKSYSPPVQLGEPMRGGGVG--E 75 (329)
T ss_pred CCcEEEEeccCCCCCCccceeEEeccC--C-CCCCCeEEEEEEEEecCHHHhhhhccCcccCCCccCCCcccCceEE--E
Confidence 468999999876777778888877554 4 56899999999999999977644443211 11124578889665 9
Q ss_pred EEEecCCCCCCCCCCEEEeccccceeEeecC-CcceeecCCCCCccc-hhhc-cCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 83 AKVLDSENPEFKKGDLVWGMTGWEEYSLVTA-PQLFKIQHTDVPLSY-YTGI-LGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~-~~~~~i~p~~~~~~~-~~a~-l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
|+++|++ ++++||+|+++++|++|+.++. +.++++ |++++.++ ++++ +++++.|||+++...+.+.++++|||+
T Consensus 76 V~~~G~~--~~~~Gd~V~~~~~~~~~~~v~~~~~~~~l-P~~~~~~~~~~~~~l~~~~~ta~~~l~~~~~~~~~~~vlI~ 152 (329)
T cd05288 76 VVESRSP--DFKVGDLVSGFLGWQEYAVVDGASGLRKL-DPSLGLPLSAYLGVLGMTGLTAYFGLTEIGKPKPGETVVVS 152 (329)
T ss_pred EEecCCC--CCCCCCEEecccceEEEEEecchhhcEEC-CcccCCCHHHHHHhcccHHHHHHHHHHhccCCCCCCEEEEe
Confidence 9999964 7999999999999999999999 999999 99853122 3444 899999999999887889999999999
Q ss_pred cCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH-cCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHH
Q 019332 160 AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK-FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAV 238 (342)
Q Consensus 160 ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~-~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~ 238 (342)
|++|++|++++++|+..|++|+++++++++.+.++ + +|++.++++++. ++.+.+.+.+.+++|+++||+|+..+..+
T Consensus 153 g~~g~ig~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~~g~~~~~~~~~~-~~~~~v~~~~~~~~d~vi~~~g~~~~~~~ 230 (329)
T cd05288 153 AAAGAVGSVVGQIAKLLGARVVGIAGSDEKCRWLV-EELGFDAAINYKTP-DLAEALKEAAPDGIDVYFDNVGGEILDAA 230 (329)
T ss_pred cCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hhcCCceEEecCCh-hHHHHHHHhccCCceEEEEcchHHHHHHH
Confidence 99999999999999999999999999999999998 6 999889998876 78888888775589999999999889999
Q ss_pred HHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeecccc
Q 019332 239 LLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLES 318 (342)
Q Consensus 239 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~ 318 (342)
+++++++|+++.+|..............+....+.+++++.+...........+.+.++++++.++.+++....++++++
T Consensus 231 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~i~~~~~~~~~l~~ 310 (329)
T cd05288 231 LTLLNKGGRIALCGAISQYNATEPPGPKNLGNIITKRLTMQGFIVSDYADRFPEALAELAKWLAEGKLKYREDVVEGLEN 310 (329)
T ss_pred HHhcCCCceEEEEeeccCcccccccccccHHHHhhCcceEEeecchhhHHHHHHHHHHHHHHHHCCCccccccccccHHH
Confidence 99999999999998754421100000123445667888888766544333334678889999999999887667789999
Q ss_pred HHHHHHHHHcCCccceEEE
Q 019332 319 APATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 319 ~~~a~~~~~~~~~~gkvvv 337 (342)
+.++++.+.+++..||+++
T Consensus 311 ~~~a~~~~~~~~~~gkvvv 329 (329)
T cd05288 311 APEAFLGLFTGKNTGKLVV 329 (329)
T ss_pred HHHHHHHHhcCCCccceeC
Confidence 9999999998888888874
|
Prostaglandins and related eicosanoids are metabolized by the oxidation of the 15(S)-hydroxyl group of the NAD+-dependent (type I 15-PGDH) 15-prostaglandin dehydrogenase (15-PGDH) followed by reduction by NADPH/NADH-dependent (type II 15-PGDH) delta-13 15-prostaglandin reductase (13-PGR) to 15-keto-13,14,-dihydroprostaglandins. 13-PGR is a bifunctional enzyme, since it also has leukotriene B(4) 12-hydroxydehydrogenase activity. These 15-PGDH and related enzymes are members of the medium chain dehydrogenase/reductase family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino |
| >PRK10754 quinone oxidoreductase, NADPH-dependent; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-39 Score=286.71 Aligned_cols=315 Identities=21% Similarity=0.192 Sum_probs=253.3
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+||++.+.++ |.| ..+++++ +|.| .+++++|+||+.++|+|++|+....+.++....|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~~~~g~e~~G--~v~~ 71 (327)
T PRK10754 1 MAKRIEFHKH--GGP--EVLQAVE--FTPA-DPAENEVQVENKAIGINYIDTYIRSGLYPPPSLPSGLGTEAAG--VVSK 71 (327)
T ss_pred CceEEEEecc--CCh--hHeEEee--ccCC-CCCCCEEEEEEEEEEcCHHHhhhcCCCCCCCCCCCccCcceEE--EEEE
Confidence 4699999988 776 4566655 4555 4689999999999999999998888766544567889999666 9999
Q ss_pred ecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecC
Q 019332 86 LDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAA 161 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga 161 (342)
+|++++.+++||+|++. |+|++|+.++.+.++++ |++++.. +++.+++.+++|++++...++++++++|+|+|+
T Consensus 72 vG~~v~~~~~Gd~V~~~~~~~g~~~~~v~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~ 149 (327)
T PRK10754 72 VGSGVKHIKVGDRVVYAQSALGAYSSVHNVPADKAAIL-PDAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAA 149 (327)
T ss_pred eCCCCCCCCCCCEEEECCCCCcceeeEEEcCHHHceeC-CCCCCHH-HHHHHHHHHHHHHHHHHhhcCCCCCCEEEEEeC
Confidence 99999999999999865 78999999999999999 9984443 366778889999999877788999999999999
Q ss_pred CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHH
Q 019332 162 SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLL 240 (342)
Q Consensus 162 ~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~ 240 (342)
+|++|++++++|+..|++|+++++++++.+.++ ++|++.+++++.. ++.+.+++.+++ ++|+++||+|+......++
T Consensus 150 ~g~ig~~~~~lak~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~ 227 (327)
T PRK10754 150 AGGVGLIACQWAKALGAKLIGTVGSAQKAQRAK-KAGAWQVINYREE-NIVERVKEITGGKKVRVVYDSVGKDTWEASLD 227 (327)
T ss_pred CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEEcCCCC-cHHHHHHHHcCCCCeEEEEECCcHHHHHHHHH
Confidence 999999999999999999999999999999998 8999888988876 888889998887 8999999999988889999
Q ss_pred hhhhCCEEEEEceeccccCCCCccccchHHHHhccee-eecceeccc---ccchHHHHHHHHHHHHcCCceee--eeeee
Q 019332 241 NMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVR-MEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVYV--EDMAE 314 (342)
Q Consensus 241 ~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~--~~~~~ 314 (342)
+++++|+++.+|..... ........+..++.. ........+ +....+.+..+++++.+|.+++. ....|
T Consensus 228 ~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~l~~~~~~~~~~ 302 (327)
T PRK10754 228 CLQRRGLMVSFGNASGP-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKF 302 (327)
T ss_pred HhccCCEEEEEccCCCC-----CCCcCHHHHhccCceEEecceeecccCCHHHHHHHHHHHHHHHHCCCeeeecccCcEE
Confidence 99999999999875421 011111111122211 111111111 22334456778999999999864 35678
Q ss_pred ccccHHHHHHHHHcCCccceEEEE
Q 019332 315 GLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 315 ~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+++++.++++.+.+++..+|+|+.
T Consensus 303 ~~~~~~~a~~~~~~~~~~~~~~~~ 326 (327)
T PRK10754 303 PLKDAQRAHEILESRATQGSSLLI 326 (327)
T ss_pred cHHHHHHHHHHHHcCCCcceEEEe
Confidence 999999999999999999999986
|
|
| >TIGR01751 crot-CoA-red crotonyl-CoA reductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-38 Score=292.35 Aligned_cols=316 Identities=18% Similarity=0.212 Sum_probs=252.9
Q ss_pred cccccEEEEec--ccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC----------Ccccc-
Q 019332 4 MVRNKQVILKD--YVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG----------SYVES- 70 (342)
Q Consensus 4 ~~~~~a~~~~~--~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~----------~~~~p- 70 (342)
+.+||||++.. + |.|. +.+++.+ +|.| .+++++|+||+.++++|++|.+...+... ....|
T Consensus 5 ~~~~~a~~~~~~~~--~~~~-~~~~~~~--~~~p-~l~~~evlV~v~~~gi~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 78 (398)
T TIGR01751 5 PETMYAFAIREERD--GDPR-QAIQLEV--VPVP-ELGPGEVLVAVMAAGVNYNNVWAALGEPVSTFAFLRKYGRDDLPF 78 (398)
T ss_pred chhhhheEEecccC--CCcc-cceEEee--cCCC-CCCCCeEEEEEEEEecCchhhhhhcCCccchhhhhcccCCCCCCc
Confidence 46789999965 6 6553 4566654 5666 46899999999999999998876554320 00123
Q ss_pred CCCCCcccccEEEEEecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceee
Q 019332 71 FKPGMPISGYGVAKVLDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKI 119 (342)
Q Consensus 71 ~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i 119 (342)
.++|||++| +|+++|++++.+++||+|++. |+|++|+.++.+.++++
T Consensus 79 ~v~G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~ae~~~v~~~~~~~v 156 (398)
T TIGR01751 79 HIIGSDASG--VVWRVGPGVTRWKVGDEVVASCLQVDLTAPDGRVGDPMLSSEQRIWGYETNFGSFAEFALVKDYQLMPK 156 (398)
T ss_pred eecccceEE--EEEEeCCCCCCCCCCCEEEEccccccCCchhhccCccccccccccccccCCCccceEEEEechHHeEEC
Confidence 379999776 999999999999999999863 78999999999999999
Q ss_pred cCCCCCccchhhccCCchhhHHHhhhh--hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc
Q 019332 120 QHTDVPLSYYTGILGMPGMTAYAGFYE--VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197 (342)
Q Consensus 120 ~p~~~~~~~~~a~l~~~~~ta~~al~~--~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~ 197 (342)
|++++.. +++.+...+.|||+++.. .+++.++++|+|+|++|++|++++++|+..|++++++++++++.+.++ ++
T Consensus 157 -P~~l~~~-~aa~~~~~~~ta~~al~~~~~~~~~~g~~vlV~Ga~g~vG~~ai~~ak~~G~~vi~~~~~~~~~~~~~-~~ 233 (398)
T TIGR01751 157 -PKHLTWE-EAACPGLTGATAYRQLVGWNPATVKPGDNVLIWGAAGGLGSYATQLARAGGGNPVAVVSSPEKAEYCR-EL 233 (398)
T ss_pred -CCCCCHH-HHhhccchHHHHHHHHhhhhccCCCCCCEEEEEcCCcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-Hc
Confidence 9984444 377788899999999854 477899999999999999999999999999999998888999999998 89
Q ss_pred CCCeeEecCCc---------------------hhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceec
Q 019332 198 GFDEAFNYKEE---------------------PDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 198 g~~~v~~~~~~---------------------~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|++.++|+++. ..+.+.+.+.+++ ++|++|||+|...+..++++++++|+++.+|...
T Consensus 234 g~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~d~vld~~g~~~~~~~~~~l~~~G~~v~~g~~~ 313 (398)
T TIGR01751 234 GAEAVIDRNDFGHWGRLPDLNTQAPKEWTKSFKRFGKRIRELTGGEDPDIVFEHPGRATFPTSVFVCRRGGMVVICGGTT 313 (398)
T ss_pred CCCEEecCCCcchhhccccccccccchhhhcchhHHHHHHHHcCCCCceEEEECCcHHHHHHHHHhhccCCEEEEEcccc
Confidence 99988887542 0245667777776 8999999999988889999999999999998764
Q ss_pred cccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceE
Q 019332 256 QYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQ 335 (342)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 335 (342)
..+. ......++.++.++.+..... .+.++++++++.++.+.+.+..++++++++++++.+.+++..||+
T Consensus 314 ~~~~-----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~l~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 383 (398)
T TIGR01751 314 GYNH-----DYDNRYLWMRQKRIQGSHFAN-----LREAWEANRLVAKGRIDPTLSKVYPLEEIGQAHQDVHRNHHQGNV 383 (398)
T ss_pred CCCC-----CcCHHHHhhcccEEEccccCc-----HHHHHHHHHHHHCCCcccceeeEEcHHHHHHHHHHHHcCCCCceE
Confidence 4211 223334445666666654433 344678999999999998777888999999999999999999999
Q ss_pred EEEec
Q 019332 336 VVAVA 340 (342)
Q Consensus 336 vv~~~ 340 (342)
|+++.
T Consensus 384 vv~~~ 388 (398)
T TIGR01751 384 AVLVL 388 (398)
T ss_pred EEEeC
Confidence 99874
|
The enzyme modelled by this alignment is responsible for the conversion of crotonyl-CoA reductase to butyryl-CoA. In serine cycle methylotrophic bacteria this enzyme is involved in the process of acetyl-CoA to glyoxylate. In other bacteria the enzyme is used to produce butyrate for incorporation into polyketides such as tylosin from Streptomyces fradiae and coronatine from Pseudomonas syringae. |
| >cd08274 MDR9 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-39 Score=289.54 Aligned_cols=307 Identities=20% Similarity=0.225 Sum_probs=248.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC--------------------C
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--------------------S 66 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--------------------~ 66 (342)
||++++.+. +.+ +.+.+.+ +.+.| ++.+++|+|||.++++|++|+..+.|.++ .
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~-~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 74 (350)
T cd08274 1 MRAVLLTGH--GGL--DKLVYRD-DVPVP-TPAPGEVLIRVGACGVNNTDINTREGWYSTEVDGATDSTGAGEAGWWGGT 74 (350)
T ss_pred CeEEEEecc--CCc--cceeecc-cCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCCCCCccccccccccccccccccCC
Confidence 578888876 655 3344432 23444 45899999999999999999988766432 2
Q ss_pred ccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec----------------------cccceeEeecCCcceeecCCCC
Q 019332 67 YVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM----------------------TGWEEYSLVTAPQLFKIQHTDV 124 (342)
Q Consensus 67 ~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~----------------------g~~~~~~~v~~~~~~~i~p~~~ 124 (342)
...|.++|||++| +|+++|+++++|++||+|++. |+|++|+.++.+.++++ |+++
T Consensus 75 ~~~p~~~G~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~ 151 (350)
T cd08274 75 LSFPRIQGADIVG--RVVAVGEGVDTARIGERVLVDPSIRDPPEDDPADIDYIGSERDGGFAEYTVVPAENAYPV-NSPL 151 (350)
T ss_pred CCCCcccCCcceE--EEEEeCCCCCCCCCCCEEEEecCcCCCCccccccccccCCCCCccceEEEEecHHHceeC-CCCC
Confidence 3457899999776 999999999999999999872 78999999999999999 9984
Q ss_pred CccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEe
Q 019332 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFN 204 (342)
Q Consensus 125 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~ 204 (342)
+.. +++++++++.|||+++ ...+++++++|||+|++|++|++++++|+.+|++|+++++++ +++.++ ++|++.+++
T Consensus 152 ~~~-~~a~l~~~~~ta~~~~-~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~g~~vi~~~~~~-~~~~~~-~~g~~~~~~ 227 (350)
T cd08274 152 SDV-ELATFPCSYSTAENML-ERAGVGAGETVLVTGASGGVGSALVQLAKRRGAIVIAVAGAA-KEEAVR-ALGADTVIL 227 (350)
T ss_pred CHH-HHHhcccHHHHHHHHH-hhcCCCCCCEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCch-hhHHHH-hcCCeEEEe
Confidence 443 3788999999999998 668899999999999999999999999999999999998765 778887 899976666
Q ss_pred cCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeeccee
Q 019332 205 YKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV 283 (342)
Q Consensus 205 ~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (342)
.... ...+ .+.+.+ ++|++|||+|+..+..++++++++|+++.+|..... ........++.+++++.+...
T Consensus 228 ~~~~-~~~~--~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~ 299 (350)
T cd08274 228 RDAP-LLAD--AKALGGEPVDVVADVVGGPLFPDLLRLLRPGGRYVTAGAIAGP-----VVELDLRTLYLKDLTLFGSTL 299 (350)
T ss_pred CCCc-cHHH--HHhhCCCCCcEEEecCCHHHHHHHHHHhccCCEEEEecccCCc-----cccCCHHHhhhcceEEEEeec
Confidence 5543 3333 445555 899999999998899999999999999999864321 112344555678888877655
Q ss_pred cccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 284 RDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.. .+.++++++++.++.+++.+..+++++++.+|++.+.++...||+|+.+
T Consensus 300 ~~-----~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvvi~~ 350 (350)
T cd08274 300 GT-----REVFRRLVRYIEEGEIRPVVAKTFPLSEIREAQAEFLEKRHVGKLVLVP 350 (350)
T ss_pred CC-----HHHHHHHHHHHHCCCcccccccccCHHHHHHHHHHHhcCCCceEEEEeC
Confidence 33 5678889999999999877777889999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08263 Zn_ADH10 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-38 Score=288.22 Aligned_cols=307 Identities=21% Similarity=0.263 Sum_probs=254.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||||++.++ +++ +++++.++ | ++++++|+||+.++++|++|+..+.+..+. .+|.++|||++| +|+.+
T Consensus 1 ~~a~~~~~~--~~~----~~~~~~~~--~-~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~-~~p~~~g~e~~G--~v~~v 68 (367)
T cd08263 1 MKAAVLKGP--NPP----LTIEEIPV--P-RPKEGEILIRVAACGVCHSDLHVLKGELPF-PPPFVLGHEISG--EVVEV 68 (367)
T ss_pred CeeEEEecC--CCC----cEEEEeeC--C-CCCCCeEEEEEEEeeeCcchHHHhcCCCCC-CCCcccccccce--EEEEe
Confidence 589999888 644 56765444 4 468999999999999999999888775532 457899999776 99999
Q ss_pred cCCCCC---CCCCCEEEe----------------------------------------------------ccccceeEee
Q 019332 87 DSENPE---FKKGDLVWG----------------------------------------------------MTGWEEYSLV 111 (342)
Q Consensus 87 G~~v~~---~~vGd~V~~----------------------------------------------------~g~~~~~~~v 111 (342)
|+++++ +++||+|++ .|+|++|+.+
T Consensus 69 G~~~~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~ 148 (367)
T cd08263 69 GPNVENPYGLSVGDRVVGSFIMPCGKCRYCARGKENLCEDFFAYNRLKGTLYDGTTRLFRLDGGPVYMYSMGGLAEYAVV 148 (367)
T ss_pred CCCCCCCCcCCCCCEEEEcCCCCCCCChHHhCcCcccCcCccccccccccccCCcccccccCCCccccccCCcceeEEEe
Confidence 999988 999999987 2789999999
Q ss_pred cCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhH
Q 019332 112 TAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKI 190 (342)
Q Consensus 112 ~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~ 190 (342)
+.+.++++ |++++.. +++.++..++|||+++...+.++++++|||+| +|++|++++++|+..|++ |+++++++++.
T Consensus 149 ~~~~~~~~-P~~is~~-~aa~l~~~~~tA~~~l~~~~~~~~g~~VlI~g-~g~vG~~~~~lak~~G~~~vi~~~~s~~~~ 225 (367)
T cd08263 149 PATALAPL-PESLDYT-ESAVLGCAGFTAYGALKHAADVRPGETVAVIG-VGGVGSSAIQLAKAFGASPIIAVDVRDEKL 225 (367)
T ss_pred chhhEEEC-CCCCCHH-HHhHhcchHHHHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHH
Confidence 99999999 9995444 38889999999999998888889999999996 699999999999999997 99998899998
Q ss_pred HHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccch
Q 019332 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNL 268 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~ 268 (342)
+.++ ++|++.+++++.. ++.+.+++.+++ ++|++||++++. ....++++++++|+++.++..... .......
T Consensus 226 ~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~~d~vld~vg~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~ 299 (367)
T cd08263 226 AKAK-ELGATHTVNAAKE-DAVAAIREITGGRGVDVVVEALGKPETFKLALDVVRDGGRAVVVGLAPGG----ATAEIPI 299 (367)
T ss_pred HHHH-HhCCceEecCCcc-cHHHHHHHHhCCCCCCEEEEeCCCHHHHHHHHHHHhcCCEEEEEccCCCC----CccccCH
Confidence 9888 8999999999887 888888888766 899999999996 889999999999999999864321 0112233
Q ss_pred HHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 269 MYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 269 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
..++.+++++.++.... ..+.++.+++++.++.+++. +...++++++.++++.+.+++..||+||+
T Consensus 300 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~ll~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~g~~~~~ 367 (367)
T cd08263 300 TRLVRRGIKIIGSYGAR----PRQDLPELVGLAASGKLDPEALVTHKYKLEEINEAYENLRKGLIHGRAIVE 367 (367)
T ss_pred HHHhhCCeEEEecCCCC----cHHHHHHHHHHHHcCCCCcccceeEEecHHHHHHHHHHHhcCCccceeeeC
Confidence 44446777776642211 14678889999999998864 55678999999999999999888999974
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subu |
| >cd08250 Mgc45594_like Mgc45594 gene product and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=284.14 Aligned_cols=320 Identities=30% Similarity=0.475 Sum_probs=259.2
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~ 84 (342)
+||||.+.++ ++-.++.+++++. +.| .+.+++|+||+.++++|+.|+....|.+. ...+|.++|+|++| +|+
T Consensus 1 ~~~~~~~~~~--~~~~~~~~~~~~~--~~~-~~~~~ev~i~v~~~gi~~~d~~~~~g~~~~~~~~p~~~g~e~~G--~v~ 73 (329)
T cd08250 1 SFRKLVVHRL--SPNFREATSIVDV--PVP-LPGPGEVLVKNRFVGINASDINFTAGRYDPGVKPPFDCGFEGVG--EVV 73 (329)
T ss_pred CceEEEeccC--CCCcccCceEEec--CCC-CCCCCEEEEEEEEEecCHHHHHHHhCCCCCCCCCCcccCceeEE--EEE
Confidence 4799999998 5511245677664 444 45899999999999999999988777543 24567899999776 999
Q ss_pred EecCCCCCCCCCCEEEec--cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 85 VLDSENPEFKKGDLVWGM--TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~--g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
.+|++++++++||+|+++ |+|++|+.++.+.++++ |++ +. +++.++..+.|||+++.+.++++++++|+|+|++
T Consensus 74 ~vG~~v~~~~~Gd~V~~~~~g~~~s~~~v~~~~~~~i-p~~--~~-~~a~l~~~~~ta~~~l~~~~~~~~~~~vlI~ga~ 149 (329)
T cd08250 74 AVGEGVTDFKVGDAVATMSFGAFAEYQVVPARHAVPV-PEL--KP-EVLPLLVSGLTASIALEEVGEMKSGETVLVTAAA 149 (329)
T ss_pred EECCCCCCCCCCCEEEEecCcceeEEEEechHHeEEC-CCC--cc-hhhhcccHHHHHHHHHHHhcCCCCCCEEEEEeCc
Confidence 999999999999999987 89999999999999999 886 44 4778999999999999888899999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l 242 (342)
|++|++++++|+..|++|+++++++++.+.++ ++|++.+++.++. ++.+.+.+..++++|+++||.|+..+..+++++
T Consensus 150 g~ig~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~~~~~~~~~vd~v~~~~g~~~~~~~~~~l 227 (329)
T cd08250 150 GGTGQFAVQLAKLAGCHVIGTCSSDEKAEFLK-SLGCDRPINYKTE-DLGEVLKKEYPKGVDVVYESVGGEMFDTCVDNL 227 (329)
T ss_pred cHHHHHHHHHHHHcCCeEEEEeCcHHHHHHHH-HcCCceEEeCCCc-cHHHHHHHhcCCCCeEEEECCcHHHHHHHHHHh
Confidence 99999999999999999999999999999998 8999888888776 777777766545899999999998889999999
Q ss_pred hhCCEEEEEceeccccCCCC----ccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeee--eeeecc
Q 019332 243 KIHGRIAVCGMISQYNLDRP----EGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVE--DMAEGL 316 (342)
Q Consensus 243 ~~~G~~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~--~~~~~l 316 (342)
+++|+++.+|.......... .........+.+++++.+.....+.....+.+.++++++.++.+.+.. ...+++
T Consensus 228 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~ 307 (329)
T cd08250 228 ALKGRLIVIGFISGYQSGTGPSPVKGATLPPKLLAKSASVRGFFLPHYAKLIPQHLDRLLQLYQRGKLVCEVDPTRFRGL 307 (329)
T ss_pred ccCCeEEEEecccCCcccCcccccccccccHHHhhcCceEEEEEhHHHHHHHHHHHHHHHHHHHCCCeeeeECCccccCH
Confidence 99999999987543200000 001112345677888887765443333456788899999999988743 334799
Q ss_pred ccHHHHHHHHHcCCccceEEEE
Q 019332 317 ESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+++++|++.+.+++..||++++
T Consensus 308 ~~~~~a~~~~~~~~~~~kvvv~ 329 (329)
T cd08250 308 ESVADAVDYLYSGKNIGKVVVE 329 (329)
T ss_pred HHHHHHHHHHHcCCCCceEEeC
Confidence 9999999999998888898863
|
Includes Human Mgc45594 gene product of undetermined function. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd05284 arabinose_DH_like D-arabinose dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-38 Score=286.15 Aligned_cols=303 Identities=22% Similarity=0.271 Sum_probs=250.0
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~v 83 (342)
|||+++.++ |++ +.+.+. |.| ++++++|+||+.++++|++|+..+.|.+. ...+|.++|+|++| +|
T Consensus 1 ~ka~~~~~~--~~~----~~~~~~--~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~G~e~~G--~V 69 (340)
T cd05284 1 MKAARLYEY--GKP----LRLEDV--PVP-EPGPGQVLVRVGGAGVCHSDLHVIDGVWGGILPYKLPFTLGHENAG--WV 69 (340)
T ss_pred CeeeEeccC--CCC----ceEEeC--CCC-CCCCCeEEEEEEEEeecchhHHHHcCCCcccccCCCCeecccceeE--EE
Confidence 589999987 655 566554 445 46899999999999999999988877553 23457889999666 99
Q ss_pred EEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhcc
Q 019332 84 KVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l 133 (342)
.++|+++.++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.+
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-P~~ls~~-~aa~l 147 (340)
T cd05284 70 EEVGSGVDGLKEGDPVVVHPPWGCGTCRYCRRGEENYCENARFPGIGTDGGFAEYLLVPSRRLVKL-PRGLDPV-EAAPL 147 (340)
T ss_pred EEeCCCCCcCcCCCEEEEcCCCCCCCChHHhCcCcccCCCCcccCccCCCcceeeEEecHHHeEEC-CCCCCHH-Hhhhh
Confidence 9999999999999999864 58999999999999999 9984433 38889
Q ss_pred CCchhhHHHhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCeeEecCCchhH
Q 019332 134 GMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDL 211 (342)
Q Consensus 134 ~~~~~ta~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 211 (342)
+..+.|||+++... ..+.++++|||+|+ |++|++++++|+..| ++|+++++++++.+.++ ++|++++++++. .+
T Consensus 148 ~~~~~ta~~~l~~~~~~~~~~~~vlI~g~-~~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~ 223 (340)
T cd05284 148 ADAGLTAYHAVKKALPYLDPGSTVVVIGV-GGLGHIAVQILRALTPATVIAVDRSEEALKLAE-RLGADHVLNASD--DV 223 (340)
T ss_pred cchHHHHHHHHHHhcccCCCCCEEEEEcC-cHHHHHHHHHHHHhCCCcEEEEeCCHHHHHHHH-HhCCcEEEcCCc--cH
Confidence 99999999999776 56889999999995 779999999999999 79999999999999997 999999888876 36
Q ss_pred HHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccc
Q 019332 212 NEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHL 289 (342)
Q Consensus 212 ~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 289 (342)
.+.+++.+++ ++|+++||+|+ ..+..++++|+++|+++.+|..... .......+.+++++.+.....
T Consensus 224 ~~~i~~~~~~~~~dvvld~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~-------~~~~~~~~~~~~~~~~~~~~~---- 292 (340)
T cd05284 224 VEEVRELTGGRGADAVIDFVGSDETLALAAKLLAKGGRYVIVGYGGHG-------RLPTSDLVPTEISVIGSLWGT---- 292 (340)
T ss_pred HHHHHHHhCCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEEcCCCCC-------ccCHHHhhhcceEEEEEeccc----
Confidence 7778887776 89999999997 7889999999999999999864321 112233356788877754432
Q ss_pred hHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 290 YPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 290 ~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+.+..+++++.++.+++.+ ..++++++++|++.+.+++..||+++.+
T Consensus 293 -~~~~~~~~~~l~~g~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvv~~~ 340 (340)
T cd05284 293 -RAELVEVVALAESGKVKVEI-TKFPLEDANEALDRLREGRVTGRAVLVP 340 (340)
T ss_pred -HHHHHHHHHHHHhCCCCcce-EEEeHHHHHHHHHHHHcCCccceEEecC
Confidence 45678899999999988643 4689999999999999999899999753
|
This group contains arabinose dehydrogenase (AraDH) and related alcohol dehydrogenases. AraDH is a member of the medium chain dehydrogenase/reductase family and catalyzes the NAD(P)-dependent oxidation of D-arabinose and other pentoses, the initial step in the metabolism of d-arabinose into 2-oxoglutarate. Like the alcohol dehydrogenases, AraDH binds a zinc in the catalytic cleft as well as a distal structural zinc. AraDH forms homotetramers as a dimer of dimers. AraDH replaces a conserved catalytic His with replace with Arg, compared to the canonical ADH site. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol d |
| >cd08240 6_hydroxyhexanoate_dh_like 6-hydroxyhexanoate dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-38 Score=286.42 Aligned_cols=305 Identities=19% Similarity=0.214 Sum_probs=250.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC------------CccccCCCC
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG------------SYVESFKPG 74 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~------------~~~~p~~~G 74 (342)
|||+++..+ +++ +++++ +|.| +++++||+||+.++++|++|++.+.+.++ ....|.++|
T Consensus 1 ~~a~~~~~~--~~~----~~~~~--~~~p-~~~~~ev~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~~g 71 (350)
T cd08240 1 MKAAAVVEP--GKP----LEEVE--IDTP-KPPGTEVLVKVTACGVCHSDLHIWDGGYDLGGGKTMSLDDRGVKLPLVLG 71 (350)
T ss_pred CeeEEeccC--CCC----ceEEe--cCCC-CCCCCeEEEEEEEEecCchhHHHHcCCCCccccccccccccCCCCCcccc
Confidence 589989877 655 56665 5555 46899999999999999999988776432 223467899
Q ss_pred CcccccEEEEEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCC
Q 019332 75 MPISGYGVAKVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDV 124 (342)
Q Consensus 75 ~e~~G~g~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~ 124 (342)
+|++| +|+++|++++++++||+|+++ |++++|+.++.+.++++ |+++
T Consensus 72 ~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~ 148 (350)
T cd08240 72 HEIVG--EVVAVGPDAADVKVGDKVLVYPWIGCGECPVCLAGDENLCAKGRALGIFQDGGYAEYVIVPHSRYLVD-PGGL 148 (350)
T ss_pred cceeE--EEEeeCCCCCCCCCCCEEEECCcCCCCCChHHHCcCcccCCCCCceeeeccCcceeeEEecHHHeeeC-CCCC
Confidence 99776 999999999999999999864 68999999999999999 9985
Q ss_pred CccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeE
Q 019332 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAF 203 (342)
Q Consensus 125 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~ 203 (342)
+.. +++.+++.++|||+++.....++++++|||+| +|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++
T Consensus 149 s~~-~aa~l~~~~~tA~~~~~~~~~~~~~~~vlI~g-~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~ 225 (350)
T cd08240 149 DPA-LAATLACSGLTAYSAVKKLMPLVADEPVVIIG-AGGLGLMALALLKALGPANIIVVDIDEAKLEAAK-AAGADVVV 225 (350)
T ss_pred CHH-HeehhhchhhhHHHHHHhcccCCCCCEEEEEC-CcHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCcEEe
Confidence 444 37788899999999997777777899999996 59999999999999999 8999999999999998 89998888
Q ss_pred ecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecce
Q 019332 204 NYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFL 282 (342)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (342)
++++. ++.+.+.+..++++|++||+.|+ ..+..++++|+++|+++.+|...... .........+++++.+..
T Consensus 226 ~~~~~-~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~~~~~~~~~i~~~~ 298 (350)
T cd08240 226 NGSDP-DAAKRIIKAAGGGVDAVIDFVNNSATASLAFDILAKGGKLVLVGLFGGEA------TLPLPLLPLRALTIQGSY 298 (350)
T ss_pred cCCCc-cHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCeEEEECCCCCCC------cccHHHHhhcCcEEEEcc
Confidence 88776 77777877765589999999986 78899999999999999998754321 112222334777776655
Q ss_pred ecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 283 VRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 283 ~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
... .+.+..+++++.++.+++.+...++++++.+|++.+.+++..||++++
T Consensus 299 ~~~-----~~~~~~~~~ll~~~~i~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~ 349 (350)
T cd08240 299 VGS-----LEELRELVALAKAGKLKPIPLTERPLSDVNDALDDLKAGKVVGRAVLK 349 (350)
T ss_pred cCC-----HHHHHHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCCccceEEec
Confidence 443 367888999999999987777788999999999999999888999985
|
6-hydroxyhexanoate dehydrogenase, an enzyme of the zinc-dependent alcohol dehydrogenase-like family of medium chain dehydrogenases/reductases catalyzes the conversion of 6-hydroxyhexanoate and NAD(+) to 6-oxohexanoate + NADH and H+. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzy |
| >PTZ00354 alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-38 Score=284.37 Aligned_cols=319 Identities=23% Similarity=0.305 Sum_probs=259.1
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~ 84 (342)
+|||+++.++ +.+ +.+++.+ .+.| ++.+++|+||+.++++|+.|.....+..+ ....|.++|+|++| +|+
T Consensus 1 ~m~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~ 71 (334)
T PTZ00354 1 MMRAVTLKGF--GGV--DVLKIGE--SPKP-APKRNDVLIKVSAAGVNRADTLQRQGKYPPPPGSSEILGLEVAG--YVE 71 (334)
T ss_pred CcEEEEEEec--CCC--cceEEEe--CCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccceeeEE--EEE
Confidence 5799999988 655 3455554 4444 56899999999999999999888776442 22335689999777 999
Q ss_pred EecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecC
Q 019332 85 VLDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAA 161 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga 161 (342)
++|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.+|++++...++++++++|+|+|+
T Consensus 72 ~vG~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~vlI~ga 149 (334)
T PTZ00354 72 DVGSDVKRFKEGDRVMALLPGGGYAEYAVAHKGHVMHI-PQGYTFE-EAAAIPEAFLTAWQLLKKHGDVKKGQSVLIHAG 149 (334)
T ss_pred EeCCCCCCCCCCCEEEEecCCCceeeEEEecHHHcEeC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEcC
Confidence 999999999999999997 79999999999999999 9984433 377888899999999988789999999999999
Q ss_pred CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchh-HHHHHHHHCCC-CccEEEeCCChhhHHHHH
Q 019332 162 SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD-LNEALKRYFPE-GIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 162 ~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~~~~~~~ 239 (342)
+|++|++++++|+..|++++++.+++++.+.++ ++|++.++++... + +.+.+++.+++ ++|++|||.|+..+..++
T Consensus 150 ~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~ 227 (334)
T PTZ00354 150 ASGVGTAAAQLAEKYGAATIITTSSEEKVDFCK-KLAAIILIRYPDE-EGFAPKVKKLTGEKGVNLVLDCVGGSYLSETA 227 (334)
T ss_pred CchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHHHhCCCCceEEEECCchHHHHHHH
Confidence 999999999999999999888999999999998 8999888888765 5 78888888876 899999999999899999
Q ss_pred HhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCceeeeeeee
Q 019332 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVYVEDMAE 314 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 314 (342)
++++++|+++.+|...+..+ .......++.++.++.+...... +....+.++++++++.++.+.+.+...+
T Consensus 228 ~~l~~~g~~i~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~ 303 (334)
T PTZ00354 228 EVLAVDGKWIVYGFMGGAKV----EKFNLLPLLRKRASIIFSTLRSRSDEYKADLVASFEREVLPYMEEGEIKPIVDRTY 303 (334)
T ss_pred HHhccCCeEEEEecCCCCcc----cccCHHHHHhhCCEEEeeeccccchhhhHHHHHHHHHHHHHHHHCCCccCccccEE
Confidence 99999999999986443211 11333445556666666544331 1122355678889999999987777788
Q ss_pred ccccHHHHHHHHHcCCccceEEEEecC
Q 019332 315 GLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 315 ~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
++++++++++.+.+++..||+|+.+.+
T Consensus 304 ~~~~~~~~~~~~~~~~~~~kvvv~~~~ 330 (334)
T PTZ00354 304 PLEEVAEAHTFLEQNKNIGKVVLTVNE 330 (334)
T ss_pred cHHHHHHHHHHHHhCCCCceEEEecCC
Confidence 999999999999988888999998754
|
|
| >cd08297 CAD3 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.6e-38 Score=282.46 Aligned_cols=307 Identities=21% Similarity=0.222 Sum_probs=253.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ + + .++++++ +|.| .+.+++|+||+.++++|+.|...+.+..+ ....|.++|+|++| +|++
T Consensus 1 m~a~~~~~~--~-~--~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~V~~ 70 (341)
T cd08297 1 MKAAVVEEF--G-E--KPYEVKD--VPVP-EPGPGEVLVKLEASGVCHTDLHAALGDWPVKPKLPLIGGHEGAG--VVVA 70 (341)
T ss_pred CceEEeecc--C-C--CCceEEE--eeCC-CCCCCeEEEEEEEeecchhHHHHHcCCCCcCCCCCccCCcccce--EEEE
Confidence 589999888 6 2 3466655 4545 45899999999999999999988777542 12346688999776 9999
Q ss_pred ecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 86 LDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
+|++++.+++||+|+. .|+|++|+.++.+.++++ |++++.. +++.++
T Consensus 71 vG~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~s~~~~~~~~~~~l-p~~~~~~-~~a~l~ 148 (341)
T cd08297 71 VGPGVSGLKVGDRVGVKWLYDACGKCEYCRTGDETLCPNQKNSGYTVDGTFAEYAIADARYVTPI-PDGLSFE-QAAPLL 148 (341)
T ss_pred eCCCCCCCCCCCEEEEecCCCCCCCCccccCCCcccCCCccccccccCCcceeEEEeccccEEEC-CCCCCHH-HHHHHH
Confidence 9999999999999986 378999999999999999 9984443 377889
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHH
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA 214 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 214 (342)
..+.|||+++.. .+++++++|||+|+++++|++++++|+..|++|+++++++++.+.++ ++|++.++++++. ++.+.
T Consensus 149 ~~~~ta~~~~~~-~~~~~~~~vlV~g~~~~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~-~~~~~ 225 (341)
T cd08297 149 CAGVTVYKALKK-AGLKPGDWVVISGAGGGLGHLGVQYAKAMGLRVIAIDVGDEKLELAK-ELGADAFVDFKKS-DDVEA 225 (341)
T ss_pred cchHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCcEEEcCCCc-cHHHH
Confidence 999999999966 58999999999999888999999999999999999999999999997 8999999999887 78888
Q ss_pred HHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 215 LKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 215 i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
+.+.+++ ++|+++||.++ ..+..++++++++|+++.+|..... ...........+++++.+..... .+
T Consensus 226 ~~~~~~~~~vd~vl~~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~ 295 (341)
T cd08297 226 VKELTGGGGAHAVVVTAVSAAAYEQALDYLRPGGTLVCVGLPPGG-----FIPLDPFDLVLRGITIVGSLVGT-----RQ 295 (341)
T ss_pred HHHHhcCCCCCEEEEcCCchHHHHHHHHHhhcCCEEEEecCCCCC-----CCCCCHHHHHhcccEEEEeccCC-----HH
Confidence 8888866 89999997765 8888999999999999999865432 11223344556777777643332 56
Q ss_pred HHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 293 FLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.++.+++++.++.+++.+ ..|++++++++++.+.++...||+++++
T Consensus 296 ~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~gkvvi~~ 341 (341)
T cd08297 296 DLQEALEFAARGKVKPHI-QVVPLEDLNEVFEKMEEGKIAGRVVVDF 341 (341)
T ss_pred HHHHHHHHHHcCCCccee-EEEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 788899999999988644 5689999999999999999999999875
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08260 Zn_ADH6 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.9e-38 Score=283.22 Aligned_cols=308 Identities=19% Similarity=0.245 Sum_probs=254.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||||++.++ +.| +.+.+ +|.| .+.+++|+||+.++++|++|+..+.|..+...+|.++|+|++| +|+.+
T Consensus 1 m~a~~~~~~--~~~----~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~V~~~ 69 (345)
T cd08260 1 MRAAVYEEF--GEP----LEIRE--VPDP-EPPPDGVVVEVEACGVCRSDWHGWQGHDPDVTLPHVPGHEFAG--VVVEV 69 (345)
T ss_pred CeeEEEecC--CCC----cEEEE--ccCC-CCCCCeEEEEEEEeeccHHHHHHhcCCCCCCCCCeeeccceeE--EEEEE
Confidence 599999988 655 56655 5555 4589999999999999999998888865544557899999666 99999
Q ss_pred cCCCCCCCCCCEEEe------------------------------ccccceeEeecCC--cceeecCCCCCccchhhccC
Q 019332 87 DSENPEFKKGDLVWG------------------------------MTGWEEYSLVTAP--QLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 87 G~~v~~~~vGd~V~~------------------------------~g~~~~~~~v~~~--~~~~i~p~~~~~~~~~a~l~ 134 (342)
|++++.+++||+|++ .|+|++|+.++.. .++++ |++++.. +++.++
T Consensus 70 G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~i-P~~~~~~-~aa~l~ 147 (345)
T cd08260 70 GEDVSRWRVGDRVTVPFVLGCGTCPYCRAGDSNVCEHQVQPGFTHPGSFAEYVAVPRADVNLVRL-PDDVDFV-TAAGLG 147 (345)
T ss_pred CCCCccCCCCCEEEECCCCCCCCCccccCcCcccCCCCcccccCCCCcceeEEEcccccCceEEC-CCCCCHH-Hhhhhc
Confidence 999999999999986 3789999999985 89999 9994443 377888
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC-chhHHH
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-EPDLNE 213 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~ 213 (342)
.+++|||+++.+.+++.++++|+|+| +|++|++++++|+..|++|+++++++++.+.++ ++|+++++++++ . ++.+
T Consensus 148 ~~~~ta~~~l~~~~~~~~~~~vlV~g-~g~vg~~~~~~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~i~~~~~~-~~~~ 224 (345)
T cd08260 148 CRFATAFRALVHQARVKPGEWVAVHG-CGGVGLSAVMIASALGARVIAVDIDDDKLELAR-ELGAVATVNASEVE-DVAA 224 (345)
T ss_pred cchHHHHHHHHHccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HhCCCEEEccccch-hHHH
Confidence 89999999997778899999999999 699999999999999999999999999999998 899999999887 6 7888
Q ss_pred HHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 214 ALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 214 ~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
.+.+...+++|++|||+|+ ..+..++++++++|+++.+|....... ........++.+++++.+..... .+
T Consensus 225 ~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~g~~i~~g~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~-----~~ 296 (345)
T cd08260 225 AVRDLTGGGAHVSVDALGIPETCRNSVASLRKRGRHVQVGLTLGEEA---GVALPMDRVVARELEIVGSHGMP-----AH 296 (345)
T ss_pred HHHHHhCCCCCEEEEcCCCHHHHHHHHHHhhcCCEEEEeCCcCCCCC---ccccCHHHHhhcccEEEeCCcCC-----HH
Confidence 8887776589999999996 788899999999999999987543211 01223344557777777765432 56
Q ss_pred HHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 293 FLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
.++.+++++.++.+.+. +...++++++++|++.+++++..||+|++
T Consensus 297 ~~~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~v~~ 344 (345)
T cd08260 297 RYDAMLALIASGKLDPEPLVGRTISLDEAPDALAAMDDYATAGITVIT 344 (345)
T ss_pred HHHHHHHHHHcCCCChhhheeEEecHHHHHHHHHHHHcCCCCceEEec
Confidence 78889999999988764 45677999999999999999989998864
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group has the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (ty |
| >cd08285 NADP_ADH NADP(H)-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-38 Score=285.23 Aligned_cols=307 Identities=18% Similarity=0.175 Sum_probs=243.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +. +++.+ .|.| .+++++|+|||.++++|++|++.+.+......+|.++|||++| +|+++
T Consensus 1 mka~~~~~~--~~-----~~l~~--~~~p-~~~~~evlIkv~a~~i~~~d~~~~~g~~~~~~~~~~~G~e~~G--~V~~v 68 (351)
T cd08285 1 MKAFAMLGI--GK-----VGWIE--KPIP-VCGPNDAIVRPTAVAPCTSDVHTVWGGAPGERHGMILGHEAVG--VVEEV 68 (351)
T ss_pred CceEEEccC--Cc-----cEEEE--CCCC-CCCCCeEEEEEEEEEechhhHHHhcCCCCCCCCCcccCcceEE--EEEEe
Confidence 589999887 43 35655 4445 4589999999999999999998877755444568899999766 99999
Q ss_pred cCCCCCCCCCCEEEe---------------------------------ccccceeEeecCC--cceeecCCCCCccchhh
Q 019332 87 DSENPEFKKGDLVWG---------------------------------MTGWEEYSLVTAP--QLFKIQHTDVPLSYYTG 131 (342)
Q Consensus 87 G~~v~~~~vGd~V~~---------------------------------~g~~~~~~~v~~~--~~~~i~p~~~~~~~~~a 131 (342)
|++++++++||+|++ .|+|++|+.++.+ .++++ |++++.. +++
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~c~~c~~g~~~~~~~~~~~~~~~~~~~g~~~~y~~v~~~~~~~~~l-P~~~~~~-~aa 146 (351)
T cd08285 69 GSEVKDFKPGDRVIVPAITPDWRSVAAQRGYPSQSGGMLGGWKFSNFKDGVFAEYFHVNDADANLAPL-PDGLTDE-QAV 146 (351)
T ss_pred cCCcCccCCCCEEEEcCcCCCCCCHHHHCcCcccCcCCCCCccccCCCCcceeEEEEcchhhCceEEC-CCCCCHH-Hhh
Confidence 999999999999996 2689999999975 79999 9984433 377
Q ss_pred ccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchh
Q 019332 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD 210 (342)
Q Consensus 132 ~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 210 (342)
.++..+.||++++ ..++++++++|||+| +|++|++++|+|+..|+ +|+++++++++.+.++ ++|++.++++++. +
T Consensus 147 ~~~~~~~ta~~~~-~~~~~~~g~~vlI~g-~g~iG~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~ 222 (351)
T cd08285 147 MLPDMMSTGFHGA-ELANIKLGDTVAVFG-IGPVGLMAVAGARLRGAGRIIAVGSRPNRVELAK-EYGATDIVDYKNG-D 222 (351)
T ss_pred hhccchhhHHHHH-HccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HcCCceEecCCCC-C
Confidence 7888999999997 668899999999997 59999999999999999 6899999999988888 8999999999877 8
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccc--hHHHHhcceeeecceeccc
Q 019332 211 LNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHN--LMYLVTKRVRMEGFLVRDY 286 (342)
Q Consensus 211 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~ 286 (342)
+.+.+++.+.+ ++|++|||+|+ ..+..++++++++|+++.+|...... ..... .+....+..++.+....
T Consensus 223 ~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~i~~~~~~-- 296 (351)
T cd08285 223 VVEQILKLTGGKGVDAVIIAGGGQDTFEQALKVLKPGGTISNVNYYGEDD----YLPIPREEWGVGMGHKTINGGLCP-- 296 (351)
T ss_pred HHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCCc----eeecChhhhhhhccccEEEEeecC--
Confidence 88888888766 89999999997 68899999999999999998754310 00111 11111223333322111
Q ss_pred ccchHHHHHHHHHHHHcCCcee---eeeeeeccccHHHHHHHHHcCC-ccceEEEEe
Q 019332 287 YHLYPKFLEMIIPHIKEGKIVY---VEDMAEGLESAPATLIGLFSGR-NVGKQVVAV 339 (342)
Q Consensus 287 ~~~~~~~~~~~~~~~~~g~~~~---~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~ 339 (342)
...+.++++++++.+|.+++ .+...++++++++|++.+++++ ...|++|++
T Consensus 297 --~~~~~~~~~~~~~~~g~i~~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~~~ 351 (351)
T cd08285 297 --GGRLRMERLASLIEYGRVDPSKLLTHHFFGFDDIEEALMLMKDKPDDLIKPVIIF 351 (351)
T ss_pred --CccccHHHHHHHHHcCCCChhhceeccccCHHHHHHHHHHHhcccCCeEEEEEeC
Confidence 12456888999999999998 3444579999999999999987 468999864
|
This group is predominated by atypical alcohol dehydrogenases; they exist as tetramers and exhibit specificity for NADP(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like other zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric ADHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains; however, they do not have and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd05282 ETR_like 2-enoyl thioester reductase-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-38 Score=282.50 Aligned_cols=307 Identities=21% Similarity=0.290 Sum_probs=253.8
Q ss_pred CCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEEecCCCCCCCCC
Q 019332 18 GFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKVLDSENPEFKKG 96 (342)
Q Consensus 18 g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vG 96 (342)
+.|.++++.+++ .|.| ++++++|+||+.++++|+.|...+.+... .+..|.++|+|++| +|+.+|++++.+++|
T Consensus 7 ~~~~~~~~~~~~--~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~~G~~v~~~~~G 81 (323)
T cd05282 7 GEPLPLVLELVS--LPIP-PPGPGEVLVRMLAAPINPSDLITISGAYGSRPPLPAVPGNEGVG--VVVEVGSGVSGLLVG 81 (323)
T ss_pred CCCccceEEeEe--CCCC-CCCCCeEEEEEEeccCCHHHHHHhcCcCCCCCCCCCcCCcceEE--EEEEeCCCCCCCCCC
Confidence 555333555555 5555 46899999999999999999988776542 23457789999776 999999999999999
Q ss_pred CEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHH
Q 019332 97 DLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFA 173 (342)
Q Consensus 97 d~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la 173 (342)
|+|+++ |+|++|+.++.+.++++ |++++.. +++.+++.+.+||+++...+.+.++++|||+|++|++|++++++|
T Consensus 82 d~V~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~~~~~~~ta~~~~~~~~~~~~~~~vlI~g~~~~vg~~~~~~a 159 (323)
T cd05282 82 QRVLPLGGEGTWQEYVVAPADDLIPV-PDSISDE-QAAMLYINPLTAWLMLTEYLKLPPGDWVIQNAANSAVGRMLIQLA 159 (323)
T ss_pred CEEEEeCCCCcceeEEecCHHHeEEC-CCCCCHH-HHHHHhccHHHHHHHHHHhccCCCCCEEEEcccccHHHHHHHHHH
Confidence 999996 78999999999999999 9984443 377788899999999988888999999999999999999999999
Q ss_pred HHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEc
Q 019332 174 KLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 174 ~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g 252 (342)
+..|++|+++++++++.+.++ ++|++.++++++. ++...+.+.+++ ++|+++||.|+......+++++++|+++.+|
T Consensus 160 ~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g 237 (323)
T cd05282 160 KLLGFKTINVVRRDEQVEELK-ALGADEVIDSSPE-DLAQRVKEATGGAGARLALDAVGGESATRLARSLRPGGTLVNYG 237 (323)
T ss_pred HHCCCeEEEEecChHHHHHHH-hcCCCEEecccch-hHHHHHHHHhcCCCceEEEECCCCHHHHHHHHhhCCCCEEEEEc
Confidence 999999999999999999997 8999999998876 788888888877 8999999999977788999999999999998
Q ss_pred eeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHH
Q 019332 253 MISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLF 327 (342)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~ 327 (342)
..... ........+..+++++.+.....+ +....+.++++++++.++.+.+.+...++++++.+|++.+.
T Consensus 238 ~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~ 312 (323)
T cd05282 238 LLSGE-----PVPFPRSVFIFKDITVRGFWLRQWLHSATKEAKQETFAEVIKLVEAGVLTTPVGAKFPLEDFEEAVAAAE 312 (323)
T ss_pred cCCCC-----CCCCCHHHHhhcCceEEEEEehHhhccCCHHHHHHHHHHHHHHHhCCCcccCccceecHHHHHHHHHHHh
Confidence 75432 112233333447888887765543 23445678889999999999877777889999999999999
Q ss_pred cCCccceEEEE
Q 019332 328 SGRNVGKQVVA 338 (342)
Q Consensus 328 ~~~~~gkvvv~ 338 (342)
+++..||+|++
T Consensus 313 ~~~~~~kvv~~ 323 (323)
T cd05282 313 QPGRGGKVLLT 323 (323)
T ss_pred cCCCCceEeeC
Confidence 98888999863
|
2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossman |
| >cd08261 Zn_ADH7 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.2e-37 Score=280.28 Aligned_cols=302 Identities=17% Similarity=0.185 Sum_probs=247.0
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||++++++ + .+.+.+ +|.| .+++++|+|+|.++++|+.|+..+.+..+...+|.++|+|++| +|+.+
T Consensus 1 ~~a~~~~~~--~-----~~~~~~--~~~~-~~~~~~v~v~v~~~~l~~~d~~~~~~~~~~~~~~~~~g~e~~G--~V~~~ 68 (337)
T cd08261 1 MKALVCEKP--G-----RLEVVD--IPEP-VPGAGEVLVRVKRVGICGSDLHIYHGRNPFASYPRILGHELSG--EVVEV 68 (337)
T ss_pred CeEEEEeCC--C-----ceEEEE--CCCC-CCCCCeEEEEEEEEeEcccChHHHcCCCCcCCCCcccccccEE--EEEEe
Confidence 588888766 3 246655 4445 4689999999999999999998888765444457889999776 99999
Q ss_pred cCCCCCCCCCCEEEe------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWG------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++.+++||+|++ .|+|++|+.++.+ ++++ |++++.. +++.+ ..
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~-~~~~-p~~~~~~-~aa~~-~~ 144 (337)
T cd08261 69 GEGVAGLKVGDRVVVDPYISCGECYACRKGRPNCCENLQVLGVHRDGGFAEYIVVPAD-ALLV-PEGLSLD-QAALV-EP 144 (337)
T ss_pred CCCCCCCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCeeeecCCCcceeEEEechh-eEEC-CCCCCHH-Hhhhh-ch
Confidence 999999999999986 3789999999999 9999 9994333 25544 67
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
++++++++ ...+++++++|||+| +|++|++++|+|+..|++|+++.+++++.+.++ ++|+++++++++. ++.+.++
T Consensus 145 ~~~a~~~~-~~~~l~~g~~vLI~g-~g~vG~~a~~lA~~~g~~v~~~~~s~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~ 220 (337)
T cd08261 145 LAIGAHAV-RRAGVTAGDTVLVVG-AGPIGLGVIQVAKARGARVIVVDIDDERLEFAR-ELGADDTINVGDE-DVAARLR 220 (337)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEECCCHHHHHHHH-HhCCCEEecCccc-CHHHHHH
Confidence 88899888 678999999999997 599999999999999999999999999999997 8999999999887 8888898
Q ss_pred HHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 217 RYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 217 ~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
+.+++ ++|+++||+|+ ..+..++++|+++|+++.+|..... .......+..+++++.+.. ....+.+
T Consensus 221 ~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~i~~g~~~~~------~~~~~~~~~~~~~~~~~~~-----~~~~~~~ 289 (337)
T cd08261 221 ELTDGEGADVVIDATGNPASMEEAVELVAHGGRVVLVGLSKGP------VTFPDPEFHKKELTILGSR-----NATREDF 289 (337)
T ss_pred HHhCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEcCCCCC------CccCHHHHHhCCCEEEEec-----cCChhhH
Confidence 88876 89999999987 7888999999999999998864321 1122234455666665542 1235678
Q ss_pred HHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcC-CccceEEEEe
Q 019332 295 EMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSG-RNVGKQVVAV 339 (342)
Q Consensus 295 ~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~-~~~gkvvv~~ 339 (342)
+.+++++.++.+++ .+...++++++.++++.+.++ ...+|+|+++
T Consensus 290 ~~~~~l~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~v~~~ 337 (337)
T cd08261 290 PDVIDLLESGKVDPEALITHRFPFEDVPEAFDLWEAPPGGVIKVLIEF 337 (337)
T ss_pred HHHHHHHHcCCCChhhheEEEeeHHHHHHHHHHHhcCCCceEEEEEeC
Confidence 88999999999987 667788999999999999988 4778999864
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, |
| >cd05278 FDH_like Formaldehyde dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-38 Score=282.54 Aligned_cols=304 Identities=21% Similarity=0.173 Sum_probs=247.8
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCC-CCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPK-GSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~-~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ +. +.+.+ +|.| ++ ++++|+||+.++++|++|++.+.+.++...+|.++|+|++| +|++
T Consensus 1 ~ka~~~~~~--~~-----~~~~~--~~~p-~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~V~~ 68 (347)
T cd05278 1 MKALVYLGP--GK-----IGLEE--VPDP-KIQGPHDAIVRVTATSICGSDLHIYRGGVPGAKHGMILGHEFVG--EVVE 68 (347)
T ss_pred CceEEEecC--Cc-----eEEEE--cCCC-CCCCCCeEEEEEEEEEechhhHHHHcCCCCCCCCCceeccceEE--EEEE
Confidence 478888876 32 45655 5555 45 89999999999999999999888876555668899999776 9999
Q ss_pred ecCCCCCCCCCCEEEe---------------------------------ccccceeEeecCC--cceeecCCCCCccchh
Q 019332 86 LDSENPEFKKGDLVWG---------------------------------MTGWEEYSLVTAP--QLFKIQHTDVPLSYYT 130 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~v~~~--~~~~i~p~~~~~~~~~ 130 (342)
+|++++++++||+|++ .|+|++|+.++.+ .++++ |++++.. ++
T Consensus 69 vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P~~~~~~-~a 146 (347)
T cd05278 69 VGSDVKRLKPGDRVSVPCITFCGRCRFCRRGYHAHCENGLWGWKLGNRIDGGQAEYVRVPYADMNLAKI-PDGLPDE-DA 146 (347)
T ss_pred ECCCccccCCCCEEEecCCCCCCCChhHhCcCcccCcCCCcccccccCCCCeeeEEEEecchhCeEEEC-CCCCCHH-HH
Confidence 9999999999999987 2789999999997 89999 9984433 37
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
+.++.+++|||+++ ...+++++++|||.|+ |++|++++|+|+..|+ +|+++.+++++.+.++ ++|++.++++++.
T Consensus 147 a~l~~~~~ta~~~~-~~~~~~~~~~VlI~g~-g~vg~~~iqlak~~g~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~- 222 (347)
T cd05278 147 LMLSDILPTGFHGA-ELAGIKPGSTVAVIGA-GPVGLCAVAGARLLGAARIIAVDSNPERLDLAK-EAGATDIINPKNG- 222 (347)
T ss_pred hhhcchhhheeehh-hhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHH-HhCCcEEEcCCcc-
Confidence 78889999999998 6688999999999864 9999999999999997 8999988888888888 8999899999887
Q ss_pred hHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
++.+.+++.+++ ++|++||++|+ ..+..++++|+++|+++.+|...... ........+.+++++.+.....
T Consensus 223 ~~~~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-- 295 (347)
T cd05278 223 DIVEQILELTGGRGVDCVIEAVGFEETFEQAVKVVRPGGTIANVGVYGKPD-----PLPLLGEWFGKNLTFKTGLVPV-- 295 (347)
T ss_pred hHHHHHHHHcCCCCCcEEEEccCCHHHHHHHHHHhhcCCEEEEEcCCCCCc-----ccCccchhhhceeEEEeeccCc--
Confidence 788888888776 89999999998 78899999999999999998543321 0011122345667766543222
Q ss_pred cchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCc-cceEEEE
Q 019332 288 HLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRN-VGKQVVA 338 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~-~gkvvv~ 338 (342)
.+.++++++++.++.+++. +...++++++.+|++.+.+++. .+|+|++
T Consensus 296 ---~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~vv~ 346 (347)
T cd05278 296 ---RARMPELLDLIEEGKIDPSKLITHRFPLDDILKAYRLFDNKPDGCIKVVIR 346 (347)
T ss_pred ---hhHHHHHHHHHHcCCCChhHcEEEEecHHHHHHHHHHHhcCCCCceEEEec
Confidence 5678899999999998864 4567799999999999988876 6788876
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (aka ADH3) may be the ancestral form of alcohol dehydrogenase, which evolved to detoxify formaldehyde. This CD contains glutathione dependant FDH, glutathione independent FDH, and related alcohol dehydrogenases. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typicall |
| >cd08283 FDH_like_1 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.4e-37 Score=284.19 Aligned_cols=305 Identities=19% Similarity=0.194 Sum_probs=247.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +++++++ +|.|.++++++|+||+.++++|++|+..+.|..+...+|.++|||++| +|+++
T Consensus 1 m~a~~~~~~-------~~~~~~~--~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~p~~~G~e~~G--~V~~v 69 (386)
T cd08283 1 MKALVWHGK-------GDVRVEE--VPDPKIEDPTDAIVRVTATAICGSDLHLYHGYIPGMKKGDILGHEFMG--VVEEV 69 (386)
T ss_pred CeeEEEecC-------CCceEEe--CCCCCCCCCCeEEEEEEEEecchhhhhhhcCCCCCCCCCccccccceE--EEEEe
Confidence 588888754 3456665 555544369999999999999999999998876445568899999776 99999
Q ss_pred cCCCCCCCCCCEEEec--------------------------------------------------cccceeEeecCC--
Q 019332 87 DSENPEFKKGDLVWGM--------------------------------------------------TGWEEYSLVTAP-- 114 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~--------------------------------------------------g~~~~~~~v~~~-- 114 (342)
|++++++++||+|++. |+|++|+.++.+
T Consensus 70 G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~ 149 (386)
T cd08283 70 GPEVRNLKVGDRVVVPFTIACGECFYCKRGLYSQCDNTNPSAEMAKLYGHAGAGIFGYSHLTGGYAGGQAEYVRVPFADV 149 (386)
T ss_pred CCCCCCCCCCCEEEEcCcCCCCCChhhcCCCcccCCCcccccccccccccccccccccccccCCCCCeeEEEEEcccccC
Confidence 9999999999999762 678999999988
Q ss_pred cceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHH
Q 019332 115 QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLL 193 (342)
Q Consensus 115 ~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~ 193 (342)
.++++ |++++.. +++.++..++|||+++ ..++++++++|||+| +|++|++++++|+..|+ +|+++++++++.+.+
T Consensus 150 ~~~~l-p~~~~~~-~aa~l~~~~~ta~~~l-~~~~~~~g~~VlV~g-~G~vG~~~~~la~~~g~~~vi~~~~~~~~~~~~ 225 (386)
T cd08283 150 GPFKI-PDDLSDE-KALFLSDILPTGYHAA-ELAEVKPGDTVAVWG-CGPVGLFAARSAKLLGAERVIAIDRVPERLEMA 225 (386)
T ss_pred eEEEC-CCCCCHH-HHhhhccchhhhHHHH-hhccCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHH
Confidence 78999 9994443 3778899999999999 778999999999997 59999999999999998 699999999999999
Q ss_pred HHHcCCCeeEecCCchh-HHHHHHHHCCC-CccEEEeCCChh----------------------hHHHHHHhhhhCCEEE
Q 019332 194 KNKFGFDEAFNYKEEPD-LNEALKRYFPE-GIDIYFENVGGK----------------------MLDAVLLNMKIHGRIA 249 (342)
Q Consensus 194 ~~~~g~~~v~~~~~~~~-~~~~i~~~~~~-~~d~vid~~g~~----------------------~~~~~~~~l~~~G~~v 249 (342)
+ +++...++++... + +.+.+++.+.+ ++|++|||+|++ .+..++++++++|+++
T Consensus 226 ~-~~~~~~vi~~~~~-~~~~~~l~~~~~~~~~D~vld~vg~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv 303 (386)
T cd08283 226 R-SHLGAETINFEEV-DDVVEALRELTGGRGPDVCIDAVGMEAHGSPLHKAEQALLKLETDRPDALREAIQAVRKGGTVS 303 (386)
T ss_pred H-HcCCcEEEcCCcc-hHHHHHHHHHcCCCCCCEEEECCCCcccccccccccccccccccCchHHHHHHHHHhccCCEEE
Confidence 8 7743467777764 4 78888888877 899999999753 5788999999999999
Q ss_pred EEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHH
Q 019332 250 VCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLF 327 (342)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~ 327 (342)
.+|..... .........+.+++++.+.... ..+.++.+++++.++.+.+. +...|+++++.+|++.+.
T Consensus 304 ~~g~~~~~-----~~~~~~~~~~~~~~~i~~~~~~-----~~~~~~~~~~~l~~g~l~~~~~~~~~~~l~~~~~a~~~~~ 373 (386)
T cd08283 304 IIGVYGGT-----VNKFPIGAAMNKGLTLRMGQTH-----VQRYLPRLLELIESGELDPSFIITHRLPLEDAPEAYKIFD 373 (386)
T ss_pred EEcCCCCC-----cCccCHHHHHhCCcEEEeccCC-----chHHHHHHHHHHHcCCCChhHceEEEecHHHHHHHHHHHH
Confidence 99875432 1122333567788887775422 25678889999999998863 456789999999999998
Q ss_pred cCC-ccceEEEE
Q 019332 328 SGR-NVGKQVVA 338 (342)
Q Consensus 328 ~~~-~~gkvvv~ 338 (342)
+++ ..+|++++
T Consensus 374 ~~~~~~~k~~~~ 385 (386)
T cd08283 374 KKEDGCIKVVLK 385 (386)
T ss_pred hCCCCeEEEEec
Confidence 877 56899985
|
Members identified as glutathione-dependent formaldehyde dehydrogenase(FDH), a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like many zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these FDHs form dimers, with 4 zinc ions per dimer. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. T |
| >PRK10083 putative oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.5e-37 Score=279.91 Aligned_cols=302 Identities=16% Similarity=0.137 Sum_probs=240.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ + .+++++ +|.| ++++++|+||+.++++|++|++.+.|..+...+|.++|||++| +|+.+
T Consensus 1 m~a~~~~~~--~-----~~~~~~--~~~p-~~~~~~vlV~v~~~gi~~~d~~~~~g~~~~~~~p~i~G~e~~G--~V~~v 68 (339)
T PRK10083 1 MKSIVIEKP--N-----SLAIEE--RPIP-QPAAGEVRVKVKLAGICGSDSHIYRGHNPFAKYPRVIGHEFFG--VIDAV 68 (339)
T ss_pred CeEEEEecC--C-----eeEEEe--ccCC-CCCCCeEEEEEEEEEEcccchHHHcCCCCcCCCCcccccceEE--EEEEE
Confidence 478888876 3 356655 5555 4589999999999999999998887765433468899999666 99999
Q ss_pred cCCCCCCCCCCEEE---------------------------ec---cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVW---------------------------GM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~---------------------------~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++.+++||+|+ ++ |+|++|+.++.+.++++ |++ ++++.+++..+
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~--~~~~~a~~~~~ 145 (339)
T PRK10083 69 GEGVDAARIGERVAVDPVISCGHCYPCSIGKPNVCTSLVVLGVHRDGGFSEYAVVPAKNAHRI-PDA--IADQYAVMVEP 145 (339)
T ss_pred CCCCccCCCCCEEEEccccCCCCCccccCcCcccCCCCceEEEccCCcceeeEEechHHeEEC-cCC--CCHHHHhhhch
Confidence 99999999999998 33 78999999999999999 998 44443446677
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHH-cCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKL-LGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA 214 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~-~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 214 (342)
+.++++++ ..+++++|++|+|+| +|++|++++|+|+. +|++ +++++++++|.++++ ++|++.++++++. ++.+.
T Consensus 146 ~~~a~~~~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~~G~~~v~~~~~~~~~~~~~~-~~Ga~~~i~~~~~-~~~~~ 221 (339)
T PRK10083 146 FTIAANVT-GRTGPTEQDVALIYG-AGPVGLTIVQVLKGVYNVKAVIVADRIDERLALAK-ESGADWVINNAQE-PLGEA 221 (339)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHHHH
Confidence 88888654 668899999999999 59999999999996 6994 777888889989988 9999999998876 67666
Q ss_pred HHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 215 LKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 215 i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
+.. .+ ++|++||+.|+ ..+..++++++++|+++.+|..... ..........+++++.+... ..+
T Consensus 222 ~~~--~g~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~ 287 (339)
T PRK10083 222 LEE--KGIKPTLIIDAACHPSILEEAVTLASPAARIVLMGFSSEP------SEIVQQGITGKELSIFSSRL------NAN 287 (339)
T ss_pred Hhc--CCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------ceecHHHHhhcceEEEEEec------Chh
Confidence 643 23 57899999996 6889999999999999999875321 11233334456666655432 245
Q ss_pred HHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCC-ccceEEEEecC
Q 019332 293 FLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGR-NVGKQVVAVAP 341 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~~~ 341 (342)
.++++++++.++.+++. +..+|+++++++|++.+.++. ..+|+++.+.|
T Consensus 288 ~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~kvvv~~~~ 339 (339)
T PRK10083 288 KFPVVIDWLSKGLIDPEKLITHTFDFQHVADAIELFEKDQRHCCKVLLTFAE 339 (339)
T ss_pred hHHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHhcCCCceEEEEEecCC
Confidence 68889999999999873 677889999999999998654 56899998764
|
|
| >cd05280 MDR_yhdh_yhfp Yhdh and yhfp-like putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-37 Score=277.85 Aligned_cols=311 Identities=22% Similarity=0.307 Sum_probs=242.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~ 85 (342)
|||++++++ +++ +.+++++. |.| ++++++|+||+.++++|++|+..+.|..+. ..+|.++|||++| +|++
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~~--~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~ 71 (325)
T cd05280 1 FKALVVEEQ--DGG--VSLFLRTL--PLD-DLPEGDVLIRVHYSSLNYKDALAATGNGGVTRNYPHTPGIDAAG--TVVS 71 (325)
T ss_pred CceEEEccc--CCC--CcceEEeC--CCC-CCCCCeEEEEEEEeecChHHHHHhcCCCCCCCCCCCccCcccEE--EEEE
Confidence 589999988 764 34667664 445 468999999999999999999888775421 2347789999776 8888
Q ss_pred ecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCC--C-CC
Q 019332 86 LDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP--K-QG 153 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~--~-~~ 153 (342)
+ +++.+++||+|++. |+|++|+.++.+.++++ |++++.. +++.+++.+.+|++++....+. . .+
T Consensus 72 ~--~~~~~~~Gd~V~~~~~~~g~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~ 147 (325)
T cd05280 72 S--DDPRFREGDEVLVTGYDLGMNTDGGFAEYVRVPADWVVPL-PEGLSLR-EAMILGTAGFTAALSVHRLEDNGQTPED 147 (325)
T ss_pred e--CCCCCCCCCEEEEcccccCCCCCceeEEEEEEchhhEEEC-CCCCCHH-HHHhhHHHHHHHHHHHHHHhhccCCCCC
Confidence 8 56789999999984 78999999999999999 9984443 3788889999999998665433 5 45
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
++|+|+|++|++|++++++|+..|++|+++++++++++.++ ++|++.++++++. . ....+....+++|++|||.|+.
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~-~~~~~~~~~~~~d~vi~~~~~~ 224 (325)
T cd05280 148 GPVLVTGATGGVGSIAVAILAKLGYTVVALTGKEEQADYLK-SLGASEVLDREDL-L-DESKKPLLKARWAGAIDTVGGD 224 (325)
T ss_pred CEEEEECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEcchhH-H-HHHHHHhcCCCccEEEECCchH
Confidence 79999999999999999999999999999999999999998 8999888876542 1 2223333333799999999999
Q ss_pred hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc-cchHHHHHHHHHHHHcCCceeeeee
Q 019332 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMIIPHIKEGKIVYVEDM 312 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~ 312 (342)
.+..++++++++|+++.+|.....+ .......++.+++++.+....... ....+.++.+.+++..+. ...+..
T Consensus 225 ~~~~~~~~l~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~ 298 (325)
T cd05280 225 VLANLLKQTKYGGVVASCGNAAGPE-----LTTTVLPFILRGVSLLGIDSVNCPMELRKQVWQKLATEWKPDL-LEIVVR 298 (325)
T ss_pred HHHHHHHhhcCCCEEEEEecCCCCc-----cccccchheeeeeEEEEEEeecCchhHHHHHHHHHHHHHhcCC-ccceee
Confidence 9999999999999999998754321 122233344678888776554322 233455666777777774 344677
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEe
Q 019332 313 AEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 313 ~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++++++++++++.+.+++..||+|+++
T Consensus 299 ~~~~~~~~~a~~~~~~~~~~gk~vv~~ 325 (325)
T cd05280 299 EISLEELPEAIDRLLAGKHRGRTVVKI 325 (325)
T ss_pred EecHHHHHHHHHHHhcCCcceEEEEeC
Confidence 889999999999999999999999864
|
Yhdh and yhfp-like putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and so |
| >PRK09422 ethanol-active dehydrogenase/acetaldehyde-active reductase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.6e-37 Score=278.33 Aligned_cols=303 Identities=22% Similarity=0.232 Sum_probs=245.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +.+. .+++ +|.| +++++||+||+.++++|++|++.+.|..+. ..|.++|||++| +|+.+
T Consensus 1 mka~~~~~~--~~~~----~~~~--~~~p-~~~~~evlv~v~~~~i~~~d~~~~~g~~~~-~~~~~~g~e~~G--~V~~~ 68 (338)
T PRK09422 1 MKAAVVNKD--HTGD----VVVE--KTLR-PLKHGEALVKMEYCGVCHTDLHVANGDFGD-KTGRILGHEGIG--IVKEV 68 (338)
T ss_pred CeEEEecCC--CCCc----eEEE--ecCC-CCCCCeEEEEEEEEeechhHHHHHcCCCCC-CCCccCCcccce--EEEEE
Confidence 589999987 6552 3655 4555 568999999999999999999888775432 236789999777 99999
Q ss_pred cCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 87 DSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 87 G~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|++++.|++||+|++ .|+|++|+.++.+.++++ |++++.. ++++++.
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~aa~l~~ 146 (338)
T PRK09422 69 GPGVTSLKVGDRVSIAWFFEGCGHCEYCTTGRETLCRSVKNAGYTVDGGMAEQCIVTADYAVKV-PEGLDPA-QASSITC 146 (338)
T ss_pred CCCCccCCCCCEEEEccCCCCCCCChhhcCCCcccCCCccccCccccCcceeEEEEchHHeEeC-CCCCCHH-Heehhhc
Confidence 999999999999986 378999999999999999 9994443 3788899
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChhhHHHHHHHcCCCeeEecCC-chhHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-EPDLNE 213 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~ 213 (342)
.++|||+++ ..++++++++|||+| +|++|++++++|+. .|++|+++++++++.+.++ ++|++.+++++. . ++.+
T Consensus 147 ~~~ta~~~~-~~~~~~~g~~vlV~g-~g~vG~~~~~la~~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~~-~~~~ 222 (338)
T PRK09422 147 AGVTTYKAI-KVSGIKPGQWIAIYG-AGGLGNLALQYAKNVFNAKVIAVDINDDKLALAK-EVGADLTINSKRVE-DVAK 222 (338)
T ss_pred chhHHHHHH-HhcCCCCCCEEEEEC-CcHHHHHHHHHHHHhCCCeEEEEeCChHHHHHHH-HcCCcEEecccccc-cHHH
Confidence 999999998 678899999999999 59999999999998 5999999999999999998 999998888865 4 6777
Q ss_pred HHHHHCCCCcc-EEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 214 ALKRYFPEGID-IYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 214 ~i~~~~~~~~d-~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
.+++.++ ++| +++++.++..+..++++++++|+++.+|..... ..........++.++.+..... .+
T Consensus 223 ~v~~~~~-~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~ 290 (338)
T PRK09422 223 IIQEKTG-GAHAAVVTAVAKAAFNQAVDAVRAGGRVVAVGLPPES------MDLSIPRLVLDGIEVVGSLVGT-----RQ 290 (338)
T ss_pred HHHHhcC-CCcEEEEeCCCHHHHHHHHHhccCCCEEEEEeeCCCC------ceecHHHHhhcCcEEEEecCCC-----HH
Confidence 7887765 588 555656568899999999999999999864321 1123344445666665543222 45
Q ss_pred HHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 293 FLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.++.+++++.++.+.+.+. .++++++++|++.+.+++..||+++.+.
T Consensus 291 ~~~~~~~l~~~g~l~~~v~-~~~~~~~~~a~~~~~~~~~~gkvvv~~~ 337 (338)
T PRK09422 291 DLEEAFQFGAEGKVVPKVQ-LRPLEDINDIFDEMEQGKIQGRMVIDFT 337 (338)
T ss_pred HHHHHHHHHHhCCCCccEE-EEcHHHHHHHHHHHHcCCccceEEEecC
Confidence 6888999999999876544 5799999999999999999999998754
|
|
| >cd08270 MDR4 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2e-37 Score=275.03 Aligned_cols=300 Identities=20% Similarity=0.244 Sum_probs=241.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||+|++.++ + | ..+++++ .|.| .+++++|+||+.++++|+.|.+.... ...|.++|+|++| +|+++
T Consensus 1 ~~~~~~~~~--~-~--~~~~~~~--~~~p-~~~~~ev~v~v~~~~i~~~d~~~~~~----~~~~~~~g~e~~G--~v~~~ 66 (305)
T cd08270 1 MRALVVDPD--A-P--LRLRLGE--VPDP-QPAPHEALVRVAAISLNRGELKFAAE----RPDGAVPGWDAAG--VVERA 66 (305)
T ss_pred CeEEEEccC--C-C--ceeEEEe--cCCC-CCCCCEEEEEEEEEecCHHHHHhhcc----CCCCCcccceeEE--EEEEe
Confidence 488988876 5 5 3344444 5555 46899999999999999999977652 2346789999776 99999
Q ss_pred cCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCc
Q 019332 87 DSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASG 163 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g 163 (342)
|++++.|++||+|+++ |+|++|+.++.+.++++ |++++.. +++++++.+.|||+++...... ++++|+|+|++|
T Consensus 67 G~~v~~~~~Gd~V~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~ta~~~~~~~~~~-~~~~vli~g~~~ 143 (305)
T cd08270 67 AADGSGPAVGARVVGLGAMGAWAELVAVPTGWLAVL-PDGVSFA-QAATLPVAGVTALRALRRGGPL-LGRRVLVTGASG 143 (305)
T ss_pred CCCCCCCCCCCEEEEecCCcceeeEEEEchHHeEEC-CCCCCHH-HHHHhHhHHHHHHHHHHHhCCC-CCCEEEEECCCc
Confidence 9999999999999997 79999999999999999 9985444 3788999999999999776655 599999999999
Q ss_pred HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhh
Q 019332 164 AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243 (342)
Q Consensus 164 ~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~ 243 (342)
++|++++++|+..|++|+.+++++++.+.++ ++|++.+++... + ..++++|+++||+|+..+..++++++
T Consensus 144 ~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~-------~~~~~~d~vl~~~g~~~~~~~~~~l~ 213 (305)
T cd08270 144 GVGRFAVQLAALAGAHVVAVVGSPARAEGLR-ELGAAEVVVGGS--E-------LSGAPVDLVVDSVGGPQLARALELLA 213 (305)
T ss_pred HHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEeccc--c-------ccCCCceEEEECCCcHHHHHHHHHhc
Confidence 9999999999999999999999999999999 799876553322 1 12246999999999988899999999
Q ss_pred hCCEEEEEceeccccCCCCccccchHHHHh--cceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHH
Q 019332 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVT--KRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPA 321 (342)
Q Consensus 244 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~ 321 (342)
++|+++.+|..... ........+.. ++.++.++.+.. ++...+.++.+++++.++.+++.+..+++++++++
T Consensus 214 ~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~ 287 (305)
T cd08270 214 PGGTVVSVGSSSGE-----PAVFNPAAFVGGGGGRRLYTFFLYD-GEPLAADLARLLGLVAAGRLDPRIGWRGSWTEIDE 287 (305)
T ss_pred CCCEEEEEeccCCC-----cccccHHHHhcccccceEEEEEccC-HHHHHHHHHHHHHHHHCCCccceeccEEcHHHHHH
Confidence 99999999875421 11122233333 477777766543 33345678899999999999987777889999999
Q ss_pred HHHHHHcCCccceEEEEe
Q 019332 322 TLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 322 a~~~~~~~~~~gkvvv~~ 339 (342)
|++.+.+++..||+|+.+
T Consensus 288 a~~~~~~~~~~gkvvi~~ 305 (305)
T cd08270 288 AAEALLARRFRGKAVLDV 305 (305)
T ss_pred HHHHHHcCCCCceEEEeC
Confidence 999999999889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08249 enoyl_reductase_like enoyl_reductase_like | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-37 Score=280.44 Aligned_cols=305 Identities=21% Similarity=0.235 Sum_probs=246.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||++++.+ | | .++++++ +|.| .++++||+||+.++++|++|+....+.. ....|.++|+|++| +|+.+
T Consensus 1 m~a~~~~~~--~-~--~~~~~~~--~~~p-~~~~~ev~i~v~~~~i~~~d~~~~~~~~-~~~~~~~~g~e~~G--~v~~v 69 (339)
T cd08249 1 QKAAVLTGP--G-G--GLLVVVD--VPVP-KPGPDEVLVKVKAVALNPVDWKHQDYGF-IPSYPAILGCDFAG--TVVEV 69 (339)
T ss_pred CceEEeccC--C-C--CcccccC--CCCC-CCCCCEEEEEEEEEEcCchheeeeeccc-ccCCCceeeeeeeE--EEEEe
Confidence 589999888 6 4 4566655 5555 4589999999999999999998775543 12346789999776 99999
Q ss_pred cCCCCCCCCCCEEEec-----------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCC-----
Q 019332 87 DSENPEFKKGDLVWGM-----------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP----- 150 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~-----------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~----- 150 (342)
|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.+++.+.|||+++.+..++
T Consensus 70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~ 147 (339)
T cd08249 70 GSGVTRFKVGDRVAGFVHGGNPNDPRNGAFQEYVVADADLTAKI-PDNISFE-EAATLPVGLVTAALALFQKLGLPLPPP 147 (339)
T ss_pred CCCcCcCCCCCEEEEEeccccCCCCCCCcccceEEechhheEEC-CCCCCHH-HceecchHHHHHHHHHhccccCCCCCC
Confidence 9999999999999986 78999999999999999 9984444 3778889999999998766554
Q ss_pred -----CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccE
Q 019332 151 -----KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 151 -----~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
+++++|||+|++|++|++++++|+..|++|++++ ++++.+.++ ++|++.++++++. ++.+.+++.+++++|+
T Consensus 148 ~~~~~~~~~~vlI~ga~g~vg~~~~~~a~~~G~~v~~~~-~~~~~~~~~-~~g~~~v~~~~~~-~~~~~l~~~~~~~~d~ 224 (339)
T cd08249 148 KPSPASKGKPVLIWGGSSSVGTLAIQLAKLAGYKVITTA-SPKNFDLVK-SLGADAVFDYHDP-DVVEDIRAATGGKLRY 224 (339)
T ss_pred CCCCCCCCCEEEEEcChhHHHHHHHHHHHHcCCeEEEEE-CcccHHHHH-hcCCCEEEECCCc-hHHHHHHHhcCCCeeE
Confidence 7899999999999999999999999999999888 568888887 8999999999887 8888888877668999
Q ss_pred EEeCCCh-hhHHHHHHhhhh--CCEEEEEceeccccCCCCccccchHHHHhcceeeecceec-------ccccchHHHHH
Q 019332 226 YFENVGG-KMLDAVLLNMKI--HGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR-------DYYHLYPKFLE 295 (342)
Q Consensus 226 vid~~g~-~~~~~~~~~l~~--~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~ 295 (342)
++|++|+ ..+..+++++++ +|+++.+|...... .+..+.++...... ..+......++
T Consensus 225 vl~~~g~~~~~~~~~~~l~~~~~g~~v~~g~~~~~~------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (339)
T cd08249 225 ALDCISTPESAQLCAEALGRSGGGKLVSLLPVPEET------------EPRKGVKVKFVLGYTVFGEIPEDREFGEVFWK 292 (339)
T ss_pred EEEeeccchHHHHHHHHHhccCCCEEEEecCCCccc------------cCCCCceEEEEEeeeecccccccccchHHHHH
Confidence 9999998 889999999999 99999998754321 01112222111111 11233346778
Q ss_pred HHHHHHHcCCceeeeeeeec--cccHHHHHHHHHcCC-ccceEEEEe
Q 019332 296 MIIPHIKEGKIVYVEDMAEG--LESAPATLIGLFSGR-NVGKQVVAV 339 (342)
Q Consensus 296 ~~~~~~~~g~~~~~~~~~~~--l~~~~~a~~~~~~~~-~~gkvvv~~ 339 (342)
.+++++.++.+.+.+...++ ++++.+|++.+.+++ ..+|+|+++
T Consensus 293 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~kvvv~~ 339 (339)
T cd08249 293 YLPELLEEGKLKPHPVRVVEGGLEGVQEGLDLLRKGKVSGEKLVVRL 339 (339)
T ss_pred HHHHHHHcCCccCCCceecCCcHHHHHHHHHHHHCCCccceEEEEeC
Confidence 89999999999987666677 999999999999998 889999874
|
Member identified as possible enoyl reductase of the MDR family. 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol de |
| >cd08235 iditol_2_DH_like L-iditol 2-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-37 Score=278.03 Aligned_cols=303 Identities=21% Similarity=0.235 Sum_probs=245.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||||+++++ + .+.+++.++ | ++.+++|+||++++++|+.|+..+.+......+|.++|+|++| +|+++
T Consensus 1 ~~~~~~~~~--~-----~~~~~~~~~--~-~l~~~~v~i~v~~~~l~~~d~~~~~g~~~~~~~~~~~g~~~~G--~V~~~ 68 (343)
T cd08235 1 MKAAVLHGP--N-----DVRLEEVPV--P-EPGPGEVLVKVRACGICGTDVKKIRGGHTDLKPPRILGHEIAG--EIVEV 68 (343)
T ss_pred CeEEEEecC--C-----ceEEEEccC--C-CCCCCeEEEEEEEeeeccccHHHHcCCCccCCCCcccccceEE--EEEee
Confidence 488999877 4 246665444 4 5689999999999999999998887754333457789999776 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCc-----ceeecCCCCCccchhh
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQ-----LFKIQHTDVPLSYYTG 131 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~-----~~~i~p~~~~~~~~~a 131 (342)
|++++.+++||+|+++ |+|++|+.++.+. ++++ |++++.. +++
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~~~~~~l-P~~~~~~-~aa 146 (343)
T cd08235 69 GDGVTGFKVGDRVFVAPHVPCGECHYCLRGNENMCPNYKKFGNLYDGGFAEYVRVPAWAVKRGGVLKL-PDNVSFE-EAA 146 (343)
T ss_pred CCCCCCCCCCCEEEEccCCCCCCChHHHCcCcccCCCcceeccCCCCcceeeEEecccccccccEEEC-CCCCCHH-HHH
Confidence 9999999999999974 7899999999998 9999 9984433 244
Q ss_pred ccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchh
Q 019332 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD 210 (342)
Q Consensus 132 ~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~ 210 (342)
.+ .++.+|++++.. .+++++++|||+| +|++|++++|+|+..|++ |+++.+++++.+.++ ++|.+.++++++. +
T Consensus 147 ~~-~~~~~a~~~l~~-~~~~~g~~VlV~g-~g~vg~~~~~la~~~g~~~v~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~ 221 (343)
T cd08235 147 LV-EPLACCINAQRK-AGIKPGDTVLVIG-AGPIGLLHAMLAKASGARKVIVSDLNEFRLEFAK-KLGADYTIDAAEE-D 221 (343)
T ss_pred hh-hHHHHHHHHHHh-cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEecCCcc-C
Confidence 44 788999999955 5899999999997 599999999999999998 999999999989888 8999899999887 8
Q ss_pred HHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 211 LNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 211 ~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
+.+.+++.+.+ ++|+++||.++ ..+..++++++++|+++.+|...... ...........+++.+.+.....
T Consensus 222 ~~~~i~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~~~~~~~~~~~l~~~~~~~--- 294 (343)
T cd08235 222 LVEKVRELTDGRGADVVIVATGSPEAQAQALELVRKGGRILFFGGLPKGS----TVNIDPNLIHYREITITGSYAAS--- 294 (343)
T ss_pred HHHHHHHHhCCcCCCEEEECCCChHHHHHHHHHhhcCCEEEEEeccCCCC----CcccCHHHHhhCceEEEEEecCC---
Confidence 88888888877 89999999997 58889999999999999988643321 11222344555666665543322
Q ss_pred chHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 289 LYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
.+.++.+++++.++.+++ .+...++++++.++++.+.+++ .||+|++
T Consensus 295 --~~~~~~~~~l~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~~k~vi~ 343 (343)
T cd08235 295 --PEDYKEALELIASGKIDVKDLITHRFPLEDIEEAFELAADGK-SLKIVIT 343 (343)
T ss_pred --hhhHHHHHHHHHcCCCChHHheeeEeeHHHHHHHHHHHhCCC-cEEEEeC
Confidence 456788899999999863 3556789999999999999998 8999873
|
Putative L-iditol 2-dehydrogenase based on annotation of some members in this subgroup. L-iditol 2-dehydrogenase catalyzes the NAD+-dependent conversion of L-iditol to L-sorbose in fructose and mannose metabolism. This enzyme is related to sorbitol dehydrogenase, alcohol dehydrogenase, and other medium chain dehydrogenase/reductases. The zinc-dependent alcohol dehydrogenase (ADH-Zn)-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) to highlight its broad range of activities and to distinguish from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal GroES-like catalytic domain. The MDR group contains a host of activities, i |
| >cd08289 MDR_yhfp_like Yhfp putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-37 Score=277.21 Aligned_cols=312 Identities=23% Similarity=0.301 Sum_probs=237.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-CCccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-GSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~g~v~~ 85 (342)
||||++.++ |++ ..+.+++ +|.| +++++||+||+.++++|++|.....+.. ....+|.++|||++| +|++
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~--~~~p-~~~~~ev~i~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~V~~ 71 (326)
T cd08289 1 FQALVVEKD--EDD--VSVSVKN--LTLD-DLPEGDVLIRVAYSSVNYKDGLASIPGGKIVKRYPFIPGIDLAG--TVVE 71 (326)
T ss_pred CeeEEEecc--CCc--ceeEEEE--ccCC-CCCCCeEEEEEEEEecChHHhhhhcCCccccCCCCcCcccceeE--EEEE
Confidence 589999988 665 3455655 5555 4689999999999999999986654311 122347899999776 8877
Q ss_pred ecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhc--C-CCCC
Q 019332 86 LDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVC--S-PKQG 153 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~--~-~~~~ 153 (342)
+| ++++++||+|++. |+|++|+.++.+.++++ |++++.. +++.+++.+.||++++.... . ...+
T Consensus 72 ~~--~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~~~~~ 147 (326)
T cd08289 72 SN--DPRFKPGDEVIVTSYDLGVSHHGGYSEYARVPAEWVVPL-PKGLTLK-EAMILGTAGFTAALSIHRLEENGLTPEQ 147 (326)
T ss_pred cC--CCCCCCCCEEEEcccccCCCCCCcceeEEEEcHHHeEEC-CCCCCHH-HHhhhhhHHHHHHHHHHHHHhcCCCCCC
Confidence 54 5789999999975 79999999999999999 9984443 37788889999998885433 2 3457
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
++|||+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++. ..+.+++.+++++|++|||+|+.
T Consensus 148 ~~vlI~g~~g~vg~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~v~~~~~~--~~~~~~~~~~~~~d~vld~~g~~ 224 (326)
T cd08289 148 GPVLVTGATGGVGSLAVSILAKLGYEVVASTGKADAADYLK-KLGAKEVIPREEL--QEESIKPLEKQRWAGAVDPVGGK 224 (326)
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCeEEEEecCHHHHHHHH-HcCCCEEEcchhH--HHHHHHhhccCCcCEEEECCcHH
Confidence 89999999999999999999999999999999999999998 8999888887653 34556666544899999999998
Q ss_pred hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeee
Q 019332 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDM 312 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~ 312 (342)
.+..++++++++|+++.+|.....+ .......++.+++++.+...... .....+.+..+.+.+..+.+...+..
T Consensus 225 ~~~~~~~~l~~~G~~i~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (326)
T cd08289 225 TLAYLLSTLQYGGSVAVSGLTGGGE-----VETTVFPFILRGVNLLGIDSVECPMELRRRIWRRLATDLKPTQLLNEIKQ 299 (326)
T ss_pred HHHHHHHHhhcCCEEEEEeecCCCC-----CCcchhhhhhccceEEEEEeEecCchHHHHHHHHHHhhcCccccccccce
Confidence 8899999999999999999753321 11223445578888888654321 11122334444443332333334577
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEe
Q 019332 313 AEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 313 ~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++++++.+|++.+.+++..||+|+++
T Consensus 300 ~~~l~~~~~a~~~~~~~~~~gkvvv~~ 326 (326)
T cd08289 300 EITLDELPEALKQILQGRVTGRTVVKL 326 (326)
T ss_pred EeeHHHHHHHHHHHhcCcccceEEEeC
Confidence 789999999999999999999999864
|
yhfp putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH |
| >cd08286 FDH_like_ADH2 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.7e-37 Score=277.36 Aligned_cols=305 Identities=18% Similarity=0.127 Sum_probs=247.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +. +++++ .|.|.++.+++|+||+.++++|++|+..+.|.++...+|.++|||++| +|+++
T Consensus 1 m~a~~~~~~--~~-----~~~~~--~~~p~~~~~~ev~v~v~a~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~V~~~ 69 (345)
T cd08286 1 MKALVYHGP--GK-----ISWED--RPKPTIQEPTDAIVKMLKTTICGTDLHILKGDVPTVTPGRILGHEGVG--VVEEV 69 (345)
T ss_pred CceEEEecC--Cc-----eeEEe--cCCCCCCCCCeEEEEEEEeeecchhhHHHcCCCCCCCCCceecccceE--EEEEe
Confidence 578888876 42 45654 555544579999999999999999999888876544557899999666 99999
Q ss_pred cCCCCCCCCCCEEEec-------------------------------cccceeEeecCC--cceeecCCCCCccchhhcc
Q 019332 87 DSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAP--QLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~--~~~~i~p~~~~~~~~~a~l 133 (342)
|++++.+++||+|++. |+|++|+.++.+ .++++ |++++.. +++.+
T Consensus 70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-p~~~~~~-~aa~l 147 (345)
T cd08286 70 GSAVTNFKVGDRVLISCISSCGTCGYCRKGLYSHCESGGWILGNLIDGTQAEYVRIPHADNSLYKL-PEGVDEE-AAVML 147 (345)
T ss_pred ccCccccCCCCEEEECCcCCCCCChHHHCcCcccCCCcccccccccCCeeeeEEEcccccCceEEC-CCCCCHH-Hhhhc
Confidence 9999999999999873 678999999998 89999 9984433 37788
Q ss_pred CCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
+..++|||+++...++++++++|||+|+ |++|++++|+|+..| .+|+++.+++++.+.++ ++|++.++++++. ++.
T Consensus 148 ~~~~~ta~~~~~~~~~~~~g~~vlI~g~-g~~g~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~ 224 (345)
T cd08286 148 SDILPTGYECGVLNGKVKPGDTVAIVGA-GPVGLAALLTAQLYSPSKIIMVDLDDNRLEVAK-KLGATHTVNSAKG-DAI 224 (345)
T ss_pred cchhHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCceeccccc-cHH
Confidence 8999999998767788999999999875 999999999999999 69999888888888888 8999999998876 788
Q ss_pred HHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccch
Q 019332 213 EALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLY 290 (342)
Q Consensus 213 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
+.+.+.+.+ ++|++|||+|+ ..+..++++|+++|+++.+|..... .......++.+++++.+....
T Consensus 225 ~~i~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------ 292 (345)
T cd08286 225 EQVLELTDGRGVDVVIEAVGIPATFELCQELVAPGGHIANVGVHGKP------VDLHLEKLWIKNITITTGLVD------ 292 (345)
T ss_pred HHHHHHhCCCCCCEEEECCCCHHHHHHHHHhccCCcEEEEecccCCC------CCcCHHHHhhcCcEEEeecCc------
Confidence 888888776 89999999987 6788899999999999999864321 123444557788887664221
Q ss_pred HHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCC--ccceEEEEe
Q 019332 291 PKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGR--NVGKQVVAV 339 (342)
Q Consensus 291 ~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~--~~gkvvv~~ 339 (342)
.+.++.+++++.++.+++. +..+++++++++|++.+.... ...|++|++
T Consensus 293 ~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~~k~~~~~ 345 (345)
T cd08286 293 TNTTPMLLKLVSSGKLDPSKLVTHRFKLSEIEKAYDTFSAAAKHKALKVIIDF 345 (345)
T ss_pred hhhHHHHHHHHHcCCCChHHcEEeEeeHHHHHHHHHHHhccCCCCeeEEEEeC
Confidence 2457888899999988753 567789999999999998764 345888864
|
This group is related to formaldehyde dehydrogenase (FDH), which is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. This family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Another member is identified as a dihydroxyacetone reductase. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers ( |
| >cd08299 alcohol_DH_class_I_II_IV class I, II, IV alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-37 Score=278.62 Aligned_cols=311 Identities=19% Similarity=0.202 Sum_probs=241.6
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
.++||.++... +++ +++++ +|.| ++.+++|+||+.++++|++|++.+.|... ..+|+++|||++| +|+
T Consensus 6 ~~~~a~~~~~~--~~~----~~l~~--~p~p-~~~~~~vlvkv~~~gi~~~D~~~~~g~~~-~~~p~v~G~e~~G--~V~ 73 (373)
T cd08299 6 IKCKAAVLWEP--KKP----FSIEE--IEVA-PPKAHEVRIKIVATGICRSDDHVVSGKLV-TPFPVILGHEAAG--IVE 73 (373)
T ss_pred ceeEEEEEecC--CCC----cEEEE--eecC-CCCCCEEEEEEEEEEcCcccHHHhcCCCC-CCCCccccccceE--EEE
Confidence 45788887766 443 56665 4555 45899999999999999999999887642 3467899999776 999
Q ss_pred EecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeecC
Q 019332 85 VLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVTA 113 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~~ 113 (342)
++|++++.+++||+|+++ |+|+||+.++.
T Consensus 74 ~vG~~v~~~~~Gd~V~~~~~~~c~~c~~c~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~e~~~v~~ 153 (373)
T cd08299 74 SVGEGVTTVKPGDKVIPLFVPQCGKCRACLNPESNLCLKNDLGKPQGLMQDGTSRFTCKGKPIHHFLGTSTFSEYTVVDE 153 (373)
T ss_pred EeCCCCccCCCCCEEEECCCCCCCCChhhhCCCcccCcCcccccccccccCCccccccCCcccccccCCCcccceEEecc
Confidence 999999999999999863 67999999999
Q ss_pred CcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHH
Q 019332 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDL 192 (342)
Q Consensus 114 ~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~ 192 (342)
+.++++ |++++.. +++.+.+++.|||+++...++++++++|||+| +|++|++++++|+..|+ +|+++++++++++.
T Consensus 154 ~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~VlV~G-~g~vG~~~~~~a~~~G~~~Vi~~~~~~~~~~~ 230 (373)
T cd08299 154 IAVAKI-DAAAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSAIMGCKAAGASRIIAVDINKDKFAK 230 (373)
T ss_pred cceeeC-CCCCChH-HhheeccchHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEcCCHHHHHH
Confidence 999999 9995444 37788889999999987778999999999997 59999999999999999 89999999999999
Q ss_pred HHHHcCCCeeEecCCch-hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhh-hhCCEEEEEceeccccCCCCccccchH
Q 019332 193 LKNKFGFDEAFNYKEEP-DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNM-KIHGRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 193 ~~~~~g~~~v~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
++ ++|+++++++.+.. ++.+.+++.+.+++|+++||+|+ ..+..++..+ +++|+++.+|..... . .......
T Consensus 231 a~-~lGa~~~i~~~~~~~~~~~~v~~~~~~~~d~vld~~g~~~~~~~~~~~~~~~~G~~v~~g~~~~~-~---~~~~~~~ 305 (373)
T cd08299 231 AK-ELGATECINPQDYKKPIQEVLTEMTDGGVDFSFEVIGRLDTMKAALASCHEGYGVSVIVGVPPSS-Q---NLSINPM 305 (373)
T ss_pred HH-HcCCceEecccccchhHHHHHHHHhCCCCeEEEECCCCcHHHHHHHHhhccCCCEEEEEccCCCC-c---eeecCHH
Confidence 98 89999989876530 36777777766689999999997 6677766654 579999999975431 0 1111222
Q ss_pred HHHhcceeeecceecccccchHHHHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 270 YLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 270 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+.++.++.+.....+. ..+.+.++++.+.++.++ +.+..+|+++++.+|++.+.+++. .|+++++
T Consensus 306 -~~~~~~~i~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~e~~~a~~~~~~~~~-~k~~~~~ 373 (373)
T cd08299 306 -LLLTGRTWKGAVFGGWK--SKDSVPKLVADYMAKKFNLDPLITHTLPFEKINEGFDLLRSGKS-IRTVLTF 373 (373)
T ss_pred -HHhcCCeEEEEEecCCc--cHHHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 23456777776554322 134555666777766544 346677899999999999887764 4777753
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. This group includes alcohol dehydrogenases corresponding to mammalian classes I, II, IV. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. These proteins typically form dimers (typically |
| >cd08243 quinone_oxidoreductase_like_1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-37 Score=275.55 Aligned_cols=310 Identities=20% Similarity=0.228 Sum_probs=248.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||++.+.+. +.+ +.+.+.+ .+.| ++++++|+||++++++|+.|+..+.+..+....|.++|||++| +|+++
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G--~v~~v 71 (320)
T cd08243 1 MKAIVIEQP--GGP--EVLKLRE--IPIP-EPKPGWVLIRVKAFGLNRSEIFTRQGHSPSVKFPRVLGIEAVG--EVEEA 71 (320)
T ss_pred CeEEEEcCC--CCc--cceEEee--cCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCccccceeEE--EEEEe
Confidence 478888776 544 3455544 4545 5689999999999999999998887765444557889999776 99999
Q ss_pred cCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 87 DSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
|. ..+++||+|+++ |+|++|+.++...++++ |++++.. +++.+++++.|||+++.+..+++++++||
T Consensus 72 G~--~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vl 147 (320)
T cd08243 72 PG--GTFTPGQRVATAMGGMGRTFDGSYAEYTLVPNEQVYAI-DSDLSWA-ELAALPETYYTAWGSLFRSLGLQPGDTLL 147 (320)
T ss_pred cC--CCCCCCCEEEEecCCCCCCCCcccceEEEcCHHHcEeC-CCCCCHH-HHHhcchHHHHHHHHHHHhcCCCCCCEEE
Confidence 95 579999999986 78999999999999999 9984443 37889999999999998888899999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDA 237 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~ 237 (342)
|+|++|++|++++|+|+..|++|+++++++++.+.++ ++|++.+++. .. ++.+.+++. ++++|+++||+|+..+..
T Consensus 148 V~ga~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~-~~-~~~~~i~~~-~~~~d~vl~~~~~~~~~~ 223 (320)
T cd08243 148 IRGGTSSVGLAALKLAKALGATVTATTRSPERAALLK-ELGADEVVID-DG-AIAEQLRAA-PGGFDKVLELVGTATLKD 223 (320)
T ss_pred EEcCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEec-Cc-cHHHHHHHh-CCCceEEEECCChHHHHH
Confidence 9999999999999999999999999999999999998 8999887754 44 677778877 448999999999988999
Q ss_pred HHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccc
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE 317 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~ 317 (342)
++++++++|+++.+|....... ...........+.+++++.+..... ...+.++.+++++.++.+++.+...++++
T Consensus 224 ~~~~l~~~g~~v~~g~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~~~l~ 299 (320)
T cd08243 224 SLRHLRPGGIVCMTGLLGGQWT-LEDFNPMDDIPSGVNLTLTGSSSGD---VPQTPLQELFDFVAAGHLDIPPSKVFTFD 299 (320)
T ss_pred HHHHhccCCEEEEEccCCCCcc-cCCcchhhhhhhccceEEEecchhh---hhHHHHHHHHHHHHCCceecccccEEcHH
Confidence 9999999999999987543210 0000011111235667666654332 12456888999999999987777788999
Q ss_pred cHHHHHHHHHcCCccceEEE
Q 019332 318 SAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvv 337 (342)
++.+|++.+.++...||+|+
T Consensus 300 ~~~~a~~~~~~~~~~~kvvv 319 (320)
T cd08243 300 EIVEAHAYMESNRAFGKVVV 319 (320)
T ss_pred HHHHHHHHHHhCCCCCcEEe
Confidence 99999999999888889886
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08279 Zn_ADH_class_III Class III alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.1e-37 Score=277.77 Aligned_cols=307 Identities=20% Similarity=0.257 Sum_probs=249.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +.+ +++++.+. | .+++++|+||+.++++|+.|+..+.|..+ ..+|.++|+|++| +|+.+
T Consensus 1 m~a~~~~~~--~~~----~~~~~~~~--p-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G--~V~~v 68 (363)
T cd08279 1 MRAAVLHEV--GKP----LEIEEVEL--D-DPGPGEVLVRIAAAGLCHSDLHVVTGDLP-APLPAVLGHEGAG--VVEEV 68 (363)
T ss_pred CeEEEEecC--CCC----ceEEEeeC--C-CCCCCeEEEEEEEeecCcHHHHHhcCCCC-CCCCccccccceE--EEEEe
Confidence 589999988 655 56655444 4 46899999999999999999988877554 3456789999776 99999
Q ss_pred cCCCCCCCCCCEEEe--------------------------------------------------ccccceeEeecCCcc
Q 019332 87 DSENPEFKKGDLVWG--------------------------------------------------MTGWEEYSLVTAPQL 116 (342)
Q Consensus 87 G~~v~~~~vGd~V~~--------------------------------------------------~g~~~~~~~v~~~~~ 116 (342)
|++++.+++||+|++ .|+|++|+.++.+.+
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~ 148 (363)
T cd08279 69 GPGVTGVKPGDHVVLSWIPACGTCRYCSRGQPNLCDLGAGILGGQLPDGTRRFTADGEPVGAMCGLGTFAEYTVVPEASV 148 (363)
T ss_pred CCCccccCCCCEEEECCCCCCCCChhhcCCCcccCcccccccccccCCCcccccccCccccccccCccceeeEEeccccE
Confidence 999999999999987 268999999999999
Q ss_pred eeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHH
Q 019332 117 FKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKN 195 (342)
Q Consensus 117 ~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~ 195 (342)
+++ |++++.. +++.+++.+.+||+++...+++.++++|||+| +|++|++++++|+..|++ |+++.+++++.+.++
T Consensus 149 ~~l-p~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~g~~vLI~g-~g~vG~a~i~lak~~G~~~Vi~~~~~~~~~~~~~- 224 (363)
T cd08279 149 VKI-DDDIPLD-RAALLGCGVTTGVGAVVNTARVRPGDTVAVIG-CGGVGLNAIQGARIAGASRIIAVDPVPEKLELAR- 224 (363)
T ss_pred EEC-CCCCChH-HeehhcchhHHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEEcCCHHHHHHHH-
Confidence 999 9984444 37788889999999988888999999999996 599999999999999995 999999999999887
Q ss_pred HcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHh
Q 019332 196 KFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVT 273 (342)
Q Consensus 196 ~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 273 (342)
++|++++++++.. ++...+++.+.+ ++|+++|++++ ..+..++++++++|+++.+|..... .........+..
T Consensus 225 ~~g~~~vv~~~~~-~~~~~l~~~~~~~~vd~vld~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~ 299 (363)
T cd08279 225 RFGATHTVNASED-DAVEAVRDLTDGRGADYAFEAVGRAATIRQALAMTRKGGTAVVVGMGPPG----ETVSLPALELFL 299 (363)
T ss_pred HhCCeEEeCCCCc-cHHHHHHHHcCCCCCCEEEEcCCChHHHHHHHHHhhcCCeEEEEecCCCC----cccccCHHHHhh
Confidence 8999899998876 788888888765 89999999995 7889999999999999998764321 011233444444
Q ss_pred cceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEE
Q 019332 274 KRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQV 336 (342)
Q Consensus 274 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvv 336 (342)
++..+.+..+.. ....+.++++++++.++.+++. +..+++++++.+|++.+.+++..+.++
T Consensus 300 ~~~~~~~~~~~~--~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~ 362 (363)
T cd08279 300 SEKRLQGSLYGS--ANPRRDIPRLLDLYRAGRLKLDELVTRRYSLDEINEAFADMLAGENARGVI 362 (363)
T ss_pred cCcEEEEEEecC--cCcHHHHHHHHHHHHcCCCCcceeEEEEEcHHHHHHHHHHHhcCCceeEEe
Confidence 566555543322 1235678899999999998863 566789999999999999888765554
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs, Class III ADH) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD(P) to formate and NAD(P)H. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. Class III ADH are also known as glutathione-dependent formaldehyde dehydrogenase (FDH), which convert aldehydes to corresponding carboxylic acid and alcohol. ADH is a me |
| >PRK13771 putative alcohol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-37 Score=276.60 Aligned_cols=303 Identities=24% Similarity=0.289 Sum_probs=247.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +++ +++++ +|.| .+++++|+|++.++++|++|+....|..+...+|.++|||++| +|+.+
T Consensus 1 m~a~~~~~~--~~~----~~~~~--~~~~-~~~~~~v~V~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~v~~~ 69 (334)
T PRK13771 1 MKAVILPGF--KQG----YRIEE--VPDP-KPGKDEVVIKVNYAGLCYRDLLQLQGFYPRMKYPVILGHEVVG--TVEEV 69 (334)
T ss_pred CeeEEEcCC--CCC----cEEEe--CCCC-CCCCCeEEEEEEEEeechhhHHHhcCCCCCCCCCeeccccceE--EEEEe
Confidence 589999888 654 46655 5556 4589999999999999999998887765444567889999666 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++.+++||+|++. |+|++|+.++.+.++++ |++++.. .++.+++.
T Consensus 70 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~~a~l~~~ 147 (334)
T PRK13771 70 GENVKGFKPGDRVASLLYAPDGTCEYCRSGEEAYCKNRLGYGEELDGFFAEYAKVKVTSLVKV-PPNVSDE-GAVIVPCV 147 (334)
T ss_pred CCCCccCCCCCEEEECCCCCCcCChhhcCCCcccCccccccccccCceeeeeeecchhceEEC-CCCCCHH-Hhhcccch
Confidence 9999999999999974 67999999999999999 9985444 37788899
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
+.+|++++... +++++++|+|+|++|++|++++++|+..|++|+++++++++.+.++ ++ ++.+++++ ++.+.++
T Consensus 148 ~~~a~~~~~~~-~~~~~~~vlI~g~~g~~g~~~~~la~~~g~~vi~~~~~~~~~~~~~-~~-~~~~~~~~---~~~~~v~ 221 (334)
T PRK13771 148 TGMVYRGLRRA-GVKKGETVLVTGAGGGVGIHAIQVAKALGAKVIAVTSSESKAKIVS-KY-ADYVIVGS---KFSEEVK 221 (334)
T ss_pred HHHHHHHHHhc-CCCCCCEEEEECCCccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HH-HHHhcCch---hHHHHHH
Confidence 99999999765 8999999999999999999999999999999999999999999987 77 76666654 3455566
Q ss_pred HHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHH
Q 019332 217 RYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEM 296 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
+. +++|+++||+|+..+..++++++++|+++.+|...... .........+.+++++.+... ...+.++.
T Consensus 222 ~~--~~~d~~ld~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 290 (334)
T PRK13771 222 KI--GGADIVIETVGTPTLEESLRSLNMGGKIIQIGNVDPSP----TYSLRLGYIILKDIEIIGHIS-----ATKRDVEE 290 (334)
T ss_pred hc--CCCcEEEEcCChHHHHHHHHHHhcCCEEEEEeccCCCC----CcccCHHHHHhcccEEEEecC-----CCHHHHHH
Confidence 54 36999999999988899999999999999999754320 001122233556777766532 22567889
Q ss_pred HHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 297 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++++.++.+++.+...++++++++|++.+.++...||+++..
T Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 333 (334)
T PRK13771 291 ALKLVAEGKIKPVIGAEVSLSEIDKALEELKDKSRIGKILVKP 333 (334)
T ss_pred HHHHHHcCCCcceEeeeEcHHHHHHHHHHHHcCCCcceEEEec
Confidence 9999999999877777889999999999999988889999864
|
|
| >TIGR02823 oxido_YhdH putative quinone oxidoreductase, YhdH/YhfP family | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-37 Score=273.78 Aligned_cols=309 Identities=24% Similarity=0.320 Sum_probs=242.6
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEEe
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~v 86 (342)
||+++... +.| ..+++++ +|.| .+++++|+||+.++++|++|+..+.|.++. ...|.++|||++| +|+.
T Consensus 1 ~a~~~~~~--~~~--~~~~~~~--~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~V~~- 70 (323)
T TIGR02823 1 KALVVEKE--DGK--VSAQVET--LDLS-DLPEGDVLIKVAYSSLNYKDALAITGKGGVVRSYPMIPGIDAAG--TVVS- 70 (323)
T ss_pred CeEEEccC--CCC--cceeEee--cCCC-CCCCCeEEEEEEEEEcCHHHHHHHcCCCCCCCCCCccceeeeEE--EEEe-
Confidence 67888887 766 3455655 5555 468999999999999999999888776521 2447889999776 8877
Q ss_pred cCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh--cCCCCCC-
Q 019332 87 DSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGE- 154 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~--~~~~~~~- 154 (342)
+++..|++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+.+|++++... +.+.+++
T Consensus 71 -~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~~~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~~~~~~~~~~~~~~~ 147 (323)
T TIGR02823 71 -SEDPRFREGDEVIVTGYGLGVSHDGGYSQYARVPADWLVPL-PEGLSLR-EAMALGTAGFTAALSVMALERNGLTPEDG 147 (323)
T ss_pred -cCCCCCCCCCEEEEccCCCCCCCCccceEEEEEchhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHhhhcCCCCCCc
Confidence 567789999999975 68999999999999999 9984333 3778888999998887543 3388898
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|+|+|++|++|++++++|+..|++++++++++++.+.++ ++|++.+++.++. +. .++....+++|+++||.|+..
T Consensus 148 ~vlI~g~~g~vg~~~~~la~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~--~~~~~~~~~~d~vld~~g~~~ 223 (323)
T TIGR02823 148 PVLVTGATGGVGSLAVAILSKLGYEVVASTGKAEEEDYLK-ELGASEVIDREDL-SP--PGKPLEKERWAGAVDTVGGHT 223 (323)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-hcCCcEEEccccH-HH--HHHHhcCCCceEEEECccHHH
Confidence 9999999999999999999999999999988888889997 8999888887654 32 455555446999999999988
Q ss_pred HHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeee
Q 019332 235 LDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMA 313 (342)
Q Consensus 235 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~ 313 (342)
+..++++++++|+++.+|...... .......++.+++++.+...... .....+.+..+.+++..+.+++. ...
T Consensus 224 ~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~ 297 (323)
T TIGR02823 224 LANVLAQLKYGGAVAACGLAGGPD-----LPTTVLPFILRGVSLLGIDSVYCPMALREAAWQRLATDLKPRNLESI-TRE 297 (323)
T ss_pred HHHHHHHhCCCCEEEEEcccCCCC-----ccccHHHHhhcceEEEEEeccccCchhHHHHHHHHHHHhhcCCCcCc-eee
Confidence 899999999999999999754321 11222445577888877654322 22233456777778888887654 447
Q ss_pred eccccHHHHHHHHHcCCccceEEEEe
Q 019332 314 EGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 314 ~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++++++++|++.+.+++..||+|+.+
T Consensus 298 ~~l~~~~~a~~~~~~~~~~~k~vv~~ 323 (323)
T TIGR02823 298 ITLEELPEALEQILAGQHRGRTVVDV 323 (323)
T ss_pred ecHHHHHHHHHHHhCCCccceEEEeC
Confidence 89999999999999999999999863
|
This model represents a subfamily of pfam00107 as defined by Pfam, a superfamily in which some members are zinc-binding medium-chain alcohol dehydrogenases while others are quinone oxidoreductases with no bound zinc. This subfamily includes proteins studied crystallographically for insight into function: YhdH from Escherichia coli and YhfP from Bacillus subtilis. Members bind NADPH or NAD, but not zinc. |
| >cd08254 hydroxyacyl_CoA_DH 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase, N-benzyl-3-pyrrolidinol dehydrogenase, and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.7e-37 Score=274.84 Aligned_cols=305 Identities=22% Similarity=0.266 Sum_probs=251.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
||++++..+ +.| . +.+ .+.|.| ++++++|+||+.++++|+.|...+.+..+ ...+|.++|+|++| +|+.
T Consensus 1 ~~~~~~~~~--~~~--~-~~~--~~~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~g~~~~~~~~~~~~g~~~~G--~v~~ 70 (338)
T cd08254 1 MKAWRFHKG--SKG--L-LVL--EEVPVP-EPGPGEVLVKVKAAGVCHSDLHILDGGVPTLTKLPLTLGHEIAG--TVVE 70 (338)
T ss_pred CeeEEEecC--CCC--c-eEE--eccCCC-CCCCCeEEEEEEEEeeccHhHHHHcCCCcccCCCCEeccccccE--EEEE
Confidence 589999888 766 1 344 456666 46899999999999999999988877653 33457789999666 9999
Q ss_pred ecCCCCCCCCCCEEEe------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 86 LDSENPEFKKGDLVWG------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
+|++++.+++||+|++ .|+|++|+.++.+.++++ |++++.. +++.++.
T Consensus 71 ~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~~~~ 148 (338)
T cd08254 71 VGAGVTNFKVGDRVAVPAVIPCGACALCRRGRGNLCLNQGMPGLGIDGGFAEYIVVPARALVPV-PDGVPFA-QAAVATD 148 (338)
T ss_pred ECCCCccCCCCCEEEECCCCCCCCChhhhCcCcccCCCCCccccccCCcceeeEEechHHeEEC-CCCCCHH-Hhhhhcc
Confidence 9999999999999986 278999999999999999 9985444 3778889
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+++|||+++....+++++++|||.| +|++|++++++|+..|++|+++++++++.+.++ ++|++.++++++. ...+.+
T Consensus 149 ~~~ta~~~l~~~~~~~~~~~vli~g-~g~vG~~~~~la~~~G~~V~~~~~s~~~~~~~~-~~g~~~~~~~~~~-~~~~~~ 225 (338)
T cd08254 149 AVLTPYHAVVRAGEVKPGETVLVIG-LGGLGLNAVQIAKAMGAAVIAVDIKEEKLELAK-ELGADEVLNSLDD-SPKDKK 225 (338)
T ss_pred hHHHHHHHHHhccCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCCCc-CHHHHH
Confidence 9999999998888899999999986 599999999999999999999999999999998 8999888888775 666666
Q ss_pred HHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHH
Q 019332 216 KRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
+.+.+ ++|+++||+|. ..+..++++|+++|+++.+|..... .......++.++.++.+..... .+.
T Consensus 226 -~~~~~~~~D~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~~-----~~~ 293 (338)
T cd08254 226 -AAGLGGGFDVIFDFVGTQPTFEDAQKAVKPGGRIVVVGLGRDK------LTVDLSDLIARELRIIGSFGGT-----PED 293 (338)
T ss_pred -HHhcCCCceEEEECCCCHHHHHHHHHHhhcCCEEEEECCCCCC------CccCHHHHhhCccEEEEeccCC-----HHH
Confidence 44544 89999999986 6888999999999999999864321 1223345666777766644332 567
Q ss_pred HHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 294 LEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 294 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++.+++++.++.+++. ...++++++.++++.+.+++..||+|+++
T Consensus 294 ~~~~~~ll~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 338 (338)
T cd08254 294 LPEVLDLIAKGKLDPQ-VETRPLDEIPEVLERLHKGKVKGRVVLVP 338 (338)
T ss_pred HHHHHHHHHcCCCccc-ceeEcHHHHHHHHHHHHcCCccceEEEeC
Confidence 8889999999999876 55779999999999999999899999874
|
This group contains enzymes of the zinc-dependent alcohol dehydrogenase family, including members (aka MDR) identified as 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase and N-benzyl-3-pyrrolidinol dehydrogenase. 6-hydroxycyclohex-1-ene-1-carboxyl-CoA dehydrogenase catalyzes the conversion of 6-Hydroxycyclohex-1-enecarbonyl-CoA and NAD+ to 6-Ketoxycyclohex-1-ene-1-carboxyl-CoA,NADH, and H+. This group displays the characteristic catalytic and structural zinc sites of the zinc-dependent alcohol dehydrogenases. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentatio |
| >cd08282 PFDH_like Pseudomonas putida aldehyde-dismutating formaldehyde dehydrogenase (PFDH) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.5e-37 Score=278.26 Aligned_cols=308 Identities=19% Similarity=0.159 Sum_probs=242.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||+|++.++ + .+++++ +|.|.+++++||+||+.++++|++|++.+.|..+ ...|.++|||++| +|+++
T Consensus 1 m~~~~~~~~--~-----~~~~~~--~~~p~~~~~~evlv~v~a~~i~~~D~~~~~g~~~-~~~p~~~g~e~~G--~V~~v 68 (375)
T cd08282 1 MKAVVYGGP--G-----NVAVED--VPDPKIEHPTDAIVRITTTAICGSDLHMYRGRTG-AEPGLVLGHEAMG--EVEEV 68 (375)
T ss_pred CceEEEecC--C-----ceeEEe--CCCCCCCCCCeEEEEEEEEeeCHHHHHHHcCCCC-CCCCceeccccEE--EEEEe
Confidence 478888655 2 355655 5555434789999999999999999998887654 3457899999776 99999
Q ss_pred cCCCCCCCCCCEEEe----------------------------------------ccccceeEeecCC--cceeecCCCC
Q 019332 87 DSENPEFKKGDLVWG----------------------------------------MTGWEEYSLVTAP--QLFKIQHTDV 124 (342)
Q Consensus 87 G~~v~~~~vGd~V~~----------------------------------------~g~~~~~~~v~~~--~~~~i~p~~~ 124 (342)
|++++.+++||+|++ .|+|++|+.++.+ .++++ |+++
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~g~~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~a~y~~v~~~~~~~~~l-P~~~ 147 (375)
T cd08282 69 GSAVESLKVGDRVVVPFNVACGRCRNCKRGLTGVCLTVNPGRAGGAYGYVDMGPYGGGQAEYLRVPYADFNLLKL-PDRD 147 (375)
T ss_pred CCCCCcCCCCCEEEEeCCCCCCCCHHHHCcCcccCCCCCcccccccccccccCCCCCeeeeEEEeecccCcEEEC-CCCC
Confidence 999999999999986 1679999999976 89999 9985
Q ss_pred Cccc--hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCe
Q 019332 125 PLSY--YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDE 201 (342)
Q Consensus 125 ~~~~--~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~ 201 (342)
+... .++.++.+++|||+++ ..+++++|++|+|.|+ |++|++++|+|++.|+ +|++++++++|.+.++ ++|+ .
T Consensus 148 ~~~~~~~~a~~~~~~~ta~~a~-~~~~~~~g~~vlI~g~-g~vg~~~~~~a~~~G~~~vi~~~~~~~~~~~~~-~~g~-~ 223 (375)
T cd08282 148 GAKEKDDYLMLSDIFPTGWHGL-ELAGVQPGDTVAVFGA-GPVGLMAAYSAILRGASRVYVVDHVPERLDLAE-SIGA-I 223 (375)
T ss_pred ChhhhhheeeecchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCC-e
Confidence 5442 2567888999999999 7789999999999774 9999999999999998 8999988999999988 8998 4
Q ss_pred eEecCCchhHHHHHHHHCCCCccEEEeCCChh------------hHHHHHHhhhhCCEEEEEceeccccCCCC-------
Q 019332 202 AFNYKEEPDLNEALKRYFPEGIDIYFENVGGK------------MLDAVLLNMKIHGRIAVCGMISQYNLDRP------- 262 (342)
Q Consensus 202 v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~------------~~~~~~~~l~~~G~~v~~g~~~~~~~~~~------- 262 (342)
.+++++. ++.+.+.+.+++++|+++||+|+. .+..++++++++|+++.+|..........
T Consensus 224 ~v~~~~~-~~~~~i~~~~~~~~d~v~d~~g~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~~~~~~~~~~~~~ 302 (375)
T cd08282 224 PIDFSDG-DPVEQILGLEPGGVDRAVDCVGYEARDRGGEAQPNLVLNQLIRVTRPGGGIGIVGVYVAEDPGAGDAAAKQG 302 (375)
T ss_pred EeccCcc-cHHHHHHHhhCCCCCEEEECCCCcccccccccchHHHHHHHHHHhhcCcEEEEEeccCCcccccccccccCc
Confidence 5777776 788888887766799999999985 37899999999999988876432211100
Q ss_pred ccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 263 EGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
........++.++..+.+... ...+.++.+++++.++.+++. +...++++++++|++.+.++. .+|+|++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~kvvv~ 374 (375)
T cd08282 303 ELSFDFGLLWAKGLSFGTGQA-----PVKKYNRQLRDLILAGRAKPSFVVSHVISLEDAPEAYARFDKRL-ETKVVIK 374 (375)
T ss_pred cccccHHHHHhcCcEEEEecC-----CchhhHHHHHHHHHcCCCChHHcEEEEeeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 011233444555555443321 124668889999999999863 677889999999999999988 8899985
|
Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. Unlike typical FDH, Pseudomonas putida aldehyde-dismutating FDH (PFDH) is glutathione-independent. PFDH converts 2 molecules of aldehydes to corresponding carboxylic acid and alcohol. MDH family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. Like the zinc-dependent alcohol dehydrogenases (ADH) of the medium chain alcohol dehydrogenase/reductase family (MDR), these tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. Unlike ADH, where NAD(P)(H) acts as a cofactor, NADH in FDH is a tightly bound redox cofactor (similar to nicotinamide proteins). The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fo |
| >cd08284 FDH_like_2 Glutathione-dependent formaldehyde dehydrogenase related proteins, child 2 | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-36 Score=274.77 Aligned_cols=302 Identities=19% Similarity=0.193 Sum_probs=244.8
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||||++..+ +.+++++ +|.|.+.++++|+||+.++++|+.|++...|.++ ..+|.++|+|++| +|+.+
T Consensus 1 ~~a~~~~~~-------~~~~~~~--~~~p~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G--~V~~v 68 (344)
T cd08284 1 MKAVVFKGP-------GDVRVEE--VPIPQIQDPTDAIVKVTAAAICGSDLHIYRGHIP-STPGFVLGHEFVG--EVVEV 68 (344)
T ss_pred CeeEEEecC-------CCceEEe--ccCCCCCCCCeEEEEEEEeeccccchhhhcCCCC-CCCCcccccceEE--EEEee
Confidence 478888755 2356665 4555433599999999999999999988877554 3346889999776 99999
Q ss_pred cCCCCCCCCCCEEEec----------------------------------cccceeEeecCC--cceeecCCCCCccchh
Q 019332 87 DSENPEFKKGDLVWGM----------------------------------TGWEEYSLVTAP--QLFKIQHTDVPLSYYT 130 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~----------------------------------g~~~~~~~v~~~--~~~~i~p~~~~~~~~~ 130 (342)
|++++++++||+|++. |+|++|+.++.+ .++++ |++++.. ++
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~-p~~l~~~-~a 146 (344)
T cd08284 69 GPEVRTLKVGDRVVSPFTIACGECFYCRRGQSGRCAKGGLFGYAGSPNLDGAQAEYVRVPFADGTLLKL-PDGLSDE-AA 146 (344)
T ss_pred CCCccccCCCCEEEEcccCCCCCChHHhCcCcccCCCCccccccccCCCCCceeEEEEcccccCceEEC-CCCCCHH-Hh
Confidence 9999999999999972 789999999975 89999 9984433 37
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
++++..++|||+++.. .++.++++|||+| +|++|++++++|+..|+ +|+++++++++.+.++ ++|+. .++++..
T Consensus 147 ~~l~~~~~ta~~~~~~-~~~~~~~~vlI~g-~g~vg~~~~~~a~~~g~~~v~~~~~~~~~~~~~~-~~g~~-~~~~~~~- 221 (344)
T cd08284 147 LLLGDILPTGYFGAKR-AQVRPGDTVAVIG-CGPVGLCAVLSAQVLGAARVFAVDPVPERLERAA-ALGAE-PINFEDA- 221 (344)
T ss_pred hhhcCchHHHHhhhHh-cCCccCCEEEEEC-CcHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-HhCCe-EEecCCc-
Confidence 7889999999999954 7899999999997 69999999999999997 8999988888888888 89975 4677665
Q ss_pred hHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
++...+++.+++ ++|++|||+|+ ..+..++++++++|+++.+|..... .........+.+++++....
T Consensus 222 ~~~~~l~~~~~~~~~dvvid~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~----- 291 (344)
T cd08284 222 EPVERVREATEGRGADVVLEAVGGAAALDLAFDLVRPGGVISSVGVHTAE-----EFPFPGLDAYNKNLTLRFGR----- 291 (344)
T ss_pred CHHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEECcCCCC-----CccccHHHHhhcCcEEEEec-----
Confidence 788888888876 89999999997 6888999999999999999975432 11233445667777765431
Q ss_pred cchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 288 HLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
....+.++.+++++.++.+++ .+..++++++++++++.+.+++. +|+|++
T Consensus 292 ~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~-~k~Vi~ 343 (344)
T cd08284 292 CPVRSLFPELLPLLESGRLDLEFLIDHRMPLEEAPEAYRLFDKRKV-LKVVLD 343 (344)
T ss_pred CCcchhHHHHHHHHHcCCCChHHhEeeeecHHHHHHHHHHHhcCCc-eEEEec
Confidence 123567889999999999876 35667899999999999998877 999975
|
Glutathione-dependent formaldehyde dehydrogenases (FDHs) are members of the zinc-dependent/medium chain alcohol dehydrogenase family. Formaldehyde dehydrogenase (FDH) is a member of the zinc-dependent/medium chain alcohol dehydrogenase family. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. These tetrameric FDHs have a catalytic zinc that resides between the catalytic and NAD(H)binding domains and a structural zinc in a lobe of the catalytic domain. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typical |
| >cd08256 Zn_ADH2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-36 Score=275.58 Aligned_cols=300 Identities=19% Similarity=0.201 Sum_probs=238.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC---------ccccCCCCCcc
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS---------YVESFKPGMPI 77 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~---------~~~p~~~G~e~ 77 (342)
|||+++.++ + .+++++ .|.| ++.+++|+||+.++++|++|+..+.|.... ..+|.++|||+
T Consensus 1 mka~~~~~~--~-----~~~~~~--~~~p-~~~~~~v~V~v~a~~i~~~d~~~~~g~~~~~~~~~~~~~~~~p~~~g~e~ 70 (350)
T cd08256 1 MRAVVCHGP--Q-----DYRLEE--VPVP-RPGPGEILVKVEACGICAGDIKCYHGAPSFWGDENQPPYVKPPMIPGHEF 70 (350)
T ss_pred CeeEEEecC--C-----ceEEEE--CCCC-CCCCCeEEEEEEEEEEcccchhhhcCCCccccccccCccCCCCcccCcce
Confidence 478888765 3 246655 4555 569999999999999999999888775311 13577899996
Q ss_pred cccEEEEEecCCCC--CCCCCCEEEe---------------------------c-----cccceeEeecCC-cceeecCC
Q 019332 78 SGYGVAKVLDSENP--EFKKGDLVWG---------------------------M-----TGWEEYSLVTAP-QLFKIQHT 122 (342)
Q Consensus 78 ~G~g~v~~vG~~v~--~~~vGd~V~~---------------------------~-----g~~~~~~~v~~~-~~~~i~p~ 122 (342)
+| +|+++|+.++ ++++||+|++ + |+|++|+.++++ .++++ |+
T Consensus 71 ~G--~v~~vG~~v~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~g~~~~~~~~~~~~~~~~l-P~ 147 (350)
T cd08256 71 VG--RVVELGEGAEERGVKVGDRVISEQIVPCWNCRFCNRGQYWMCQKHDLYGFQNNVNGGMAEYMRFPKEAIVHKV-PD 147 (350)
T ss_pred eE--EEEEeCCCcccCCCCCCCEEEECCcCCCCCChHHhCcCcccCcCccceeeccCCCCcceeeEEcccccceEEC-CC
Confidence 65 9999999999 9999999986 3 789999999988 47899 99
Q ss_pred CCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCe
Q 019332 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDE 201 (342)
Q Consensus 123 ~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~ 201 (342)
+++.. .++.+ .+++|+|+++ +.++++++++|+|.| +|++|++++++|+..|+ .++++++++++.+.++ ++|++.
T Consensus 148 ~~~~~-~aa~~-~~~~ta~~a~-~~~~~~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~ 222 (350)
T cd08256 148 DIPPE-DAILI-EPLACALHAV-DRANIKFDDVVVLAG-AGPLGLGMIGAARLKNPKKLIVLDLKDERLALAR-KFGADV 222 (350)
T ss_pred CCCHH-HHhhh-hHHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEEcCCHHHHHHHH-HcCCcE
Confidence 84443 25566 8899999998 778999999999955 59999999999999998 5677888888888888 899988
Q ss_pred eEecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHH-Hhcceee
Q 019332 202 AFNYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYL-VTKRVRM 278 (342)
Q Consensus 202 v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~ 278 (342)
+++++.. ++.+++.+.+++ ++|++||++|+ ..+..++++++++|+++.+|..... ........ ..+++++
T Consensus 223 v~~~~~~-~~~~~~~~~~~~~~vdvvld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~i 295 (350)
T cd08256 223 VLNPPEV-DVVEKIKELTGGYGCDIYIEATGHPSAVEQGLNMIRKLGRFVEFSVFGDP------VTVDWSIIGDRKELDV 295 (350)
T ss_pred EecCCCc-CHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEccCCCC------CccChhHhhcccccEE
Confidence 8988876 788888888877 89999999996 6788899999999999999864321 11111111 2455666
Q ss_pred ecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 279 EGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
.++... ...+.++++++.++.+++. +..+|+++++.+|++.+++++..+|+++
T Consensus 296 ~~~~~~------~~~~~~~~~~~~~g~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~kvv~ 350 (350)
T cd08256 296 LGSHLG------PYCYPIAIDLIASGRLPTDGIVTHQFPLEDFEEAFELMARGDDSIKVVL 350 (350)
T ss_pred EEeccC------chhHHHHHHHHHcCCCChhHheEEEeEHHHHHHHHHHHHhCCCceEEeC
Confidence 554432 2357788999999999874 5677899999999999999988888874
|
This group has the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenases of the MDR family. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, |
| >cd08262 Zn_ADH8 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.2e-37 Score=275.03 Aligned_cols=301 Identities=18% Similarity=0.203 Sum_probs=234.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-----------CccccCCCCC
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-----------SYVESFKPGM 75 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-----------~~~~p~~~G~ 75 (342)
|||+++..+ + +++++ .|.| ++++++|+|++.++++|+.|++.+.|... ...+|.++|+
T Consensus 1 m~a~~~~~~----~----~~~~~--~~~p-~~~~~~v~V~v~~~~~~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~ 69 (341)
T cd08262 1 MRAAVFRDG----P----LVVRD--VPDP-EPGPGQVLVKVLACGICGSDLHATAHPEAMVDDAGGPSLMDLGADIVLGH 69 (341)
T ss_pred CceEEEeCC----c----eEEEe--cCCC-CCCCCeEEEEEEEEEEcccchHHHcCCCcccccccccccccCCCCccccc
Confidence 478887633 2 56655 4555 46899999999999999999988876321 2234778999
Q ss_pred cccccEEEEEecCCCCC-CCCCCEEEec--------------------cccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 76 PISGYGVAKVLDSENPE-FKKGDLVWGM--------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 76 e~~G~g~v~~vG~~v~~-~~vGd~V~~~--------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
|++| +|+++|+++++ +++||+|+++ |+|++|+.++.+.++++ |+++ +++.++++
T Consensus 70 e~~G--~V~~vG~~v~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~--s~~~a~~~ 144 (341)
T cd08262 70 EFCG--EVVDYGPGTERKLKVGTRVTSLPLLLCGQGASCGIGLSPEAPGGYAEYMLLSEALLLRV-PDGL--SMEDAALT 144 (341)
T ss_pred ceeE--EEEEeCCCCcCCCCCCCEEEecCCcCCCCChhhhCCCCcCCCCceeeeEEechHHeEEC-CCCC--CHHHhhhh
Confidence 9766 99999999997 9999999985 78999999999999999 9984 44334467
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHH
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNE 213 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 213 (342)
.++++||+++ ..++++++++|||+|+ |++|.+++|+|+..|++ ++++.+++++.+.++ ++|+++++++++. +..+
T Consensus 145 ~~~~~a~~~~-~~~~~~~g~~VlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~i~~~~~-~~~~ 220 (341)
T cd08262 145 EPLAVGLHAV-RRARLTPGEVALVIGC-GPIGLAVIAALKARGVGPIVASDFSPERRALAL-AMGADIVVDPAAD-SPFA 220 (341)
T ss_pred hhHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEEcCCCc-CHHH
Confidence 7889999996 6789999999999975 99999999999999996 667777888888888 8999888888754 3222
Q ss_pred ---HHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 214 ---ALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 214 ---~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
.+.+.+.+ ++|++||++|+ ..+..++++++++|+++.+|...... .......+.+++++.+.....
T Consensus 221 ~~~~~~~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~~------~~~~~~~~~~~~~~~~~~~~~--- 291 (341)
T cd08262 221 AWAAELARAGGPKPAVIFECVGAPGLIQQIIEGAPPGGRIVVVGVCMESD------NIEPALAIRKELTLQFSLGYT--- 291 (341)
T ss_pred HHHHHHHHhCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEECCCCCCC------ccCHHHHhhcceEEEEEeccc---
Confidence 24444545 89999999998 57889999999999999998753210 111122234666655432222
Q ss_pred chHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 289 LYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
.+.+.++++++.++.+.+. +...+++++++++++.+.+++..||+|++
T Consensus 292 --~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~a~~~~~~~~~~~kvvv~ 341 (341)
T cd08262 292 --PEEFADALDALAEGKVDVAPMVTGTVGLDGVPDAFEALRDPEHHCKILVD 341 (341)
T ss_pred --HHHHHHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcCCCceEEEeC
Confidence 4567889999999999864 36778999999999999999989999874
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08236 sugar_DH NAD(P)-dependent sugar dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=274.17 Aligned_cols=307 Identities=21% Similarity=0.277 Sum_probs=246.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||||++.++ + .+.+++. |.| ++++++|+||+.++++|++|+..+.+.+ ...+|.++|+|++| +|+.+
T Consensus 1 ~~a~~~~~~--~-----~l~~~~~--~~~-~l~~~~v~v~v~~~~~n~~d~~~~~~~~-~~~~~~~~g~~~~G--~V~~~ 67 (343)
T cd08236 1 MKALVLTGP--G-----DLRYEDI--PKP-EPGPGEVLVKVKACGICGSDIPRYLGTG-AYHPPLVLGHEFSG--TVEEV 67 (343)
T ss_pred CeeEEEecC--C-----ceeEEec--CCC-CCCCCeEEEEEEEEEECccchHhhcCCC-CCCCCcccCcceEE--EEEEE
Confidence 589999877 3 2566554 444 5799999999999999999998877754 23457889999666 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.+ ..
T Consensus 68 g~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-P~~~~~~-~aa~~-~~ 144 (343)
T cd08236 68 GSGVDDLAVGDRVAVNPLLPCGKCEYCKKGEYSLCSNYDYIGSRRDGAFAEYVSVPARNLIKI-PDHVDYE-EAAMI-EP 144 (343)
T ss_pred CCCCCcCCCCCEEEEcCCCCCCCChhHHCcChhhCCCcceEecccCCcccceEEechHHeEEC-cCCCCHH-HHHhc-ch
Confidence 9999999999999984 78999999999999999 9984443 25555 67
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+++||+++. ..+++++++|||+| +|.+|++++|+|+.+|++ |+++++++++.+.++ ++|++.+++++.. . .+++
T Consensus 145 ~~ta~~~l~-~~~~~~~~~vlI~g-~g~~g~~~~~lA~~~G~~~v~~~~~~~~~~~~l~-~~g~~~~~~~~~~-~-~~~~ 219 (343)
T cd08236 145 AAVALHAVR-LAGITLGDTVVVIG-AGTIGLLAIQWLKILGAKRVIAVDIDDEKLAVAR-ELGADDTINPKEE-D-VEKV 219 (343)
T ss_pred HHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEecCccc-c-HHHH
Confidence 889999995 67899999999997 599999999999999996 999999999889887 8999889998876 6 7778
Q ss_pred HHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHH
Q 019332 216 KRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
++..++ ++|+++||.|+ ..+..++++|+++|+++.+|..... . ..........+.++.++.++..........+.
T Consensus 220 ~~~~~~~~~d~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (343)
T cd08236 220 RELTEGRGADLVIEAAGSPATIEQALALARPGGKVVLVGIPYGD-V--TLSEEAFEKILRKELTIQGSWNSYSAPFPGDE 296 (343)
T ss_pred HHHhCCCCCCEEEECCCCHHHHHHHHHHhhcCCEEEEEcccCCC-c--ccccCCHHHHHhcCcEEEEEeeccccccchhh
Confidence 777776 79999999987 6788999999999999999865321 0 01112334455778888777654332233566
Q ss_pred HHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHc-CCccceEEE
Q 019332 294 LEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFS-GRNVGKQVV 337 (342)
Q Consensus 294 ~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~-~~~~gkvvv 337 (342)
++++++++.++.+. +.+...++++++.++++.+.+ +...||+|+
T Consensus 297 ~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~k~v~ 343 (343)
T cd08236 297 WRTALDLLASGKIKVEPLITHRLPLEDGPAAFERLADREEFSGKVLL 343 (343)
T ss_pred HHHHHHHHHcCCCChHHheeeeecHHHHHHHHHHHHcCCCCeeEEeC
Confidence 78889999999886 345667899999999999998 667788874
|
This group contains proteins identified as sorbitol dehydrogenases and other sugar dehydrogenases of the medium-chain dehydrogenase/reductase family (MDR), which includes zinc-dependent alcohol dehydrogenase and related proteins. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Related proteins include threonine dehydrogenase, formaldehyde dehydrogenase, and butanediol dehydrogenase. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast |
| >cd05283 CAD1 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.8e-37 Score=274.89 Aligned_cols=298 Identities=22% Similarity=0.208 Sum_probs=244.2
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEec
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG 87 (342)
|+|+.++. + ..+++++.+. | +++++||+||+.++++|++|++.+.|......+|.++|||++| +|+++|
T Consensus 1 ~~~~~~~~--~----~~~~~~~~~~--p-~~~~~evlirv~a~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G--~V~~vG 69 (337)
T cd05283 1 KGYAARDA--S----GKLEPFTFER--R-PLGPDDVDIKITYCGVCHSDLHTLRNEWGPTKYPLVPGHEIVG--IVVAVG 69 (337)
T ss_pred CceEEecC--C----CCceEEeccC--C-CCCCCeEEEEEEEecccchHHHHhcCCcCCCCCCcccCcceee--EEEEEC
Confidence 46777776 4 2366666544 4 5699999999999999999999888765444568899999776 999999
Q ss_pred CCCCCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecCCCCCccch
Q 019332 88 SENPEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYY 129 (342)
Q Consensus 88 ~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~ 129 (342)
++++++++||+|+. .|+|++|+.++.+.++++ |++++.. +
T Consensus 70 ~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~ 147 (337)
T cd05283 70 SKVTKFKVGDRVGVGCQVDSCGTCEQCKSGEEQYCPKGVVTYNGKYPDGTITQGGYADHIVVDERFVFKI-PEGLDSA-A 147 (337)
T ss_pred CCCcccCCCCEEEEecCCCCCCCCccccCCchhcCcchhhcccccccCCCcCCCcceeEEEechhheEEC-CCCCCHH-H
Confidence 99999999999972 278999999999999999 9995444 3
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
++.+++.+.|||+++.. ..++++++++|.| .|++|++++++|+..|++|+++++++++.+.++ ++|++.+++.+..
T Consensus 148 aa~l~~~~~ta~~~~~~-~~~~~g~~vlV~g-~g~vG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~- 223 (337)
T cd05283 148 AAPLLCAGITVYSPLKR-NGVGPGKRVGVVG-IGGLGHLAVKFAKALGAEVTAFSRSPSKKEDAL-KLGADEFIATKDP- 223 (337)
T ss_pred hhhhhhHHHHHHHHHHh-cCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEecCcch-
Confidence 77888999999999865 4589999999977 599999999999999999999999999999998 8999888887654
Q ss_pred hHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 210 DLNEALKRYFPEGIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 210 ~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
++... ..+++|+++||+|+. .+..++++++++|+++.+|..... ...+...++.+++++.+.....
T Consensus 224 ~~~~~----~~~~~d~v~~~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~~--- 290 (337)
T cd05283 224 EAMKK----AAGSLDLIIDTVSASHDLDPYLSLLKPGGTLVLVGAPEEP------LPVPPFPLIFGRKSVAGSLIGG--- 290 (337)
T ss_pred hhhhh----ccCCceEEEECCCCcchHHHHHHHhcCCCEEEEEeccCCC------CccCHHHHhcCceEEEEecccC---
Confidence 43222 234799999999995 589999999999999999875432 1233445567888888876554
Q ss_pred chHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 289 LYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
.+.++.+++++.++.+++.+ ..++++++++|++.+.+++..||+|++
T Consensus 291 --~~~~~~~~~~~~~~~l~~~~-~~~~~~~~~~a~~~~~~~~~~~k~v~~ 337 (337)
T cd05283 291 --RKETQEMLDFAAEHGIKPWV-EVIPMDGINEALERLEKGDVRYRFVLD 337 (337)
T ss_pred --HHHHHHHHHHHHhCCCccce-EEEEHHHHHHHHHHHHcCCCcceEeeC
Confidence 56788899999999998754 568999999999999999999998874
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic |
| >PRK05396 tdh L-threonine 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.3e-36 Score=273.90 Aligned_cols=304 Identities=21% Similarity=0.238 Sum_probs=239.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC---CCccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK---GSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~g~v 83 (342)
||+|++.+. +. .+++.+. |.| ++++++|+||+.++++|++|+.++.+.. ....+|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~----~~~~~~~--~~p-~~~~~evlV~v~~~~v~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G--~V 69 (341)
T PRK05396 1 MKALVKLKA--EP----GLWLTDV--PVP-EPGPNDVLIKVKKTAICGTDVHIYNWDEWAQKTIPVPMVVGHEFVG--EV 69 (341)
T ss_pred CceEEEecC--CC----ceEEEEC--CCC-CCCCCeEEEEEEEEEEcccchHhhcCCCcccccCCCCcccceeeEE--EE
Confidence 488988877 53 3566665 445 5689999999999999999998766532 123457789999666 99
Q ss_pred EEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhcc
Q 019332 84 KVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l 133 (342)
+++|++++++++||+|++. |+|++|+.++.+.++++ |+++ +++.+++
T Consensus 70 ~~vG~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-P~~l--~~~~~~~ 146 (341)
T PRK05396 70 VEVGSEVTGFKVGDRVSGEGHIVCGHCRNCRAGRRHLCRNTKGVGVNRPGAFAEYLVIPAFNVWKI-PDDI--PDDLAAI 146 (341)
T ss_pred EEeCCCCCcCCCCCEEEECCCCCCCCChhhhCcChhhCCCcceeeecCCCcceeeEEechHHeEEC-cCCC--CHHHhHh
Confidence 9999999999999999974 78999999999999999 9984 4333334
Q ss_pred CCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
..++.++++++.. ...+|++|+|+| +|++|++++|+|+..|+ +|+++.+++++.++++ ++|++.++++++. ++.
T Consensus 147 ~~~~~~~~~~~~~--~~~~g~~vlV~~-~g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~lg~~~~~~~~~~-~~~ 221 (341)
T PRK05396 147 FDPFGNAVHTALS--FDLVGEDVLITG-AGPIGIMAAAVAKHVGARHVVITDVNEYRLELAR-KMGATRAVNVAKE-DLR 221 (341)
T ss_pred hhHHHHHHHHHHc--CCCCCCeEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HhCCcEEecCccc-cHH
Confidence 4666777666533 346899999987 59999999999999999 7888888888988888 8999999999887 888
Q ss_pred HHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccch
Q 019332 213 EALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLY 290 (342)
Q Consensus 213 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
+.+++.+.+ ++|++|||.|+ ..+..++++++++|+++.+|..... . .........+++++.++.... .
T Consensus 222 ~~~~~~~~~~~~d~v~d~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~-----~~~~~~~~~~~~~l~~~~~~~----~ 291 (341)
T PRK05396 222 DVMAELGMTEGFDVGLEMSGAPSAFRQMLDNMNHGGRIAMLGIPPGD-M-----AIDWNKVIFKGLTIKGIYGRE----M 291 (341)
T ss_pred HHHHHhcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC-C-----cccHHHHhhcceEEEEEEccC----c
Confidence 889888876 89999999987 6788999999999999999875421 1 112355666777776653211 1
Q ss_pred HHHHHHHHHHHHcC-CceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 291 PKFLEMIIPHIKEG-KIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 291 ~~~~~~~~~~~~~g-~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.+.+..+++++.++ .+.+.+...++++++.+|++.+.+++ .||++++++
T Consensus 292 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~a~~~~~~~~-~gk~vv~~~ 341 (341)
T PRK05396 292 FETWYKMSALLQSGLDLSPIITHRFPIDDFQKGFEAMRSGQ-SGKVILDWD 341 (341)
T ss_pred cchHHHHHHHHHcCCChhHheEEEEeHHHHHHHHHHHhcCC-CceEEEecC
Confidence 23455677888888 45555667789999999999999887 799999864
|
|
| >cd08259 Zn_ADH5 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-36 Score=270.33 Aligned_cols=302 Identities=25% Similarity=0.291 Sum_probs=244.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +++ +.+++ .|.| ++.+++|+|+++++++|++|++.+.|..+....|.++|+|++| +|+.+
T Consensus 1 m~a~~~~~~--~~~----~~~~~--~~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~v~~~ 69 (332)
T cd08259 1 MKAAILHKP--NKP----LQIEE--VPDP-EPGPGEVLIKVKAAGVCYRDLLFWKGFFPRGKYPLILGHEIVG--TVEEV 69 (332)
T ss_pred CeEEEEecC--CCc----eEEEE--ccCC-CCCCCeEEEEEEEEecchhhhHHhcCCCCCCCCCeeccccceE--EEEEE
Confidence 588988764 333 55655 5555 4689999999999999999999888765444557889999776 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++.+++||+|+++ |+|++|+.++...++++ |++++.. +++.++++
T Consensus 70 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~ 147 (332)
T cd08259 70 GEGVERFKPGDRVILYYYIPCGKCEYCLSGEENLCRNRAEYGEEVDGGFAEYVKVPERSLVKL-PDNVSDE-SAALAACV 147 (332)
T ss_pred CCCCccCCCCCEEEECCCCCCcCChhhhCCCcccCCCccccccccCCeeeeEEEechhheEEC-CCCCCHH-HHhhhccH
Confidence 9999999999999974 57999999999999999 9984444 37788999
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
+.+||+++.. +++++++++||+|++|++|++++++++..|++|+++++++++.+.+. +++.+.+++.. ++.+.+.
T Consensus 148 ~~ta~~~l~~-~~~~~~~~vlI~ga~g~vG~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~ 222 (332)
T cd08259 148 VGTAVHALKR-AGVKKGDTVLVTGAGGGVGIHAIQLAKALGARVIAVTRSPEKLKILK-ELGADYVIDGS---KFSEDVK 222 (332)
T ss_pred HHHHHHHHHH-hCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeEEEEeCCHHHHHHHH-HcCCcEEEecH---HHHHHHH
Confidence 9999999976 88999999999999999999999999999999999999988888887 88887777553 3455555
Q ss_pred HHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHH
Q 019332 217 RYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEM 296 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
+.. ++|+++||+|......++++++++|+++.+|...... ..........++.++.+... ...+.+++
T Consensus 223 ~~~--~~d~v~~~~g~~~~~~~~~~~~~~g~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~ 290 (332)
T cd08259 223 KLG--GADVVIELVGSPTIEESLRSLNKGGRLVLIGNVTPDP-----APLRPGLLILKEIRIIGSIS-----ATKADVEE 290 (332)
T ss_pred hcc--CCCEEEECCChHHHHHHHHHhhcCCEEEEEcCCCCCC-----cCCCHHHHHhCCcEEEEecC-----CCHHHHHH
Confidence 543 6999999999988889999999999999998754321 11122222345666555421 22567888
Q ss_pred HHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 297 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+++++.++.+++.+...++++++.+|++.+.+++..||++++
T Consensus 291 ~~~~~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~ 332 (332)
T cd08259 291 ALKLVKEGKIKPVIDRVVSLEDINEALEDLKSGKVVGRIVLK 332 (332)
T ss_pred HHHHHHcCCCccceeEEEcHHHHHHHHHHHHcCCcccEEEeC
Confidence 999999999988777788999999999999999888999874
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. This group contains proteins that share the characteristic catalytic and structural zinc-binding sites of the zinc-dependent alcohol dehydrogenase family. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone. The N-terminal catalytic domain has a distant homology to GroES. |
| >cd08276 MDR7 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-36 Score=270.22 Aligned_cols=309 Identities=23% Similarity=0.280 Sum_probs=258.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
||||+++.+ +.+ +.+++++ .+.| .+.+++++|++.++++|++|+....|..+ ....|.++|||++| +|++
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~ 71 (336)
T cd08276 1 MKAWRLSGG--GGL--DNLKLVE--EPVP-EPGPGEVLVRVHAVSLNYRDLLILNGRYPPPVKDPLIPLSDGAG--EVVA 71 (336)
T ss_pred CeEEEEecc--CCC--cceEEEe--ccCC-CCCCCeEEEEEEEEecCHHHHHHhcCCCCCCCCCCcccccceeE--EEEE
Confidence 689999877 654 3456654 4545 46899999999999999999988877542 22357789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec------------------------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHH
Q 019332 86 LDSENPEFKKGDLVWGM------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAY 141 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~ 141 (342)
+|++++++++||+|++. |+|++|+.++.+.++++ |+++++. +++.++..+.+||
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~a~~~~~~~~~a~ 149 (336)
T cd08276 72 VGEGVTRFKVGDRVVPTFFPNWLDGPPTAEDEASALGGPIDGVLAEYVVLPEEGLVRA-PDHLSFE-EAATLPCAGLTAW 149 (336)
T ss_pred eCCCCcCCCCCCEEEEecccccccccccccccccccccccCceeeeEEEecHHHeEEC-CCCCCHH-HhhhhhHHHHHHH
Confidence 99999999999999874 57999999999999999 9984443 3778888999999
Q ss_pred HhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC-chhHHHHHHHHCC
Q 019332 142 AGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-EPDLNEALKRYFP 220 (342)
Q Consensus 142 ~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~i~~~~~ 220 (342)
+++...++++++++|+|+| +|++|++++++|+..|++|+++++++++.+.++ ++|.+.+++++. . ++.+.+++.++
T Consensus 150 ~~l~~~~~~~~g~~vli~g-~g~~g~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~-~~~~~~~~~~~ 226 (336)
T cd08276 150 NALFGLGPLKPGDTVLVQG-TGGVSLFALQFAKAAGARVIATSSSDEKLERAK-ALGADHVINYRTTP-DWGEEVLKLTG 226 (336)
T ss_pred HHHHhhcCCCCCCEEEEEC-CcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEcCCccc-CHHHHHHHHcC
Confidence 9998878999999999996 699999999999999999999999999999998 789988888876 5 78888888887
Q ss_pred C-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHH
Q 019332 221 E-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299 (342)
Q Consensus 221 ~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 299 (342)
+ ++|+++|+.++..+..++++++++|+++.+|..... .........+.+++++.+..... .+.+.++++
T Consensus 227 ~~~~d~~i~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~ 296 (336)
T cd08276 227 GRGVDHVVEVGGPGTLAQSIKAVAPGGVISLIGFLSGF-----EAPVLLLPLLTKGATLRGIAVGS-----RAQFEAMNR 296 (336)
T ss_pred CCCCcEEEECCChHHHHHHHHhhcCCCEEEEEccCCCC-----ccCcCHHHHhhcceEEEEEecCc-----HHHHHHHHH
Confidence 6 899999999988889999999999999999875442 11234556678889888876543 557888889
Q ss_pred HHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 300 ~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++.++.+.+.+...+++++++++++.+.+++..+|+++++
T Consensus 297 l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 336 (336)
T cd08276 297 AIEAHRIRPVIDRVFPFEEAKEAYRYLESGSHFGKVVIRV 336 (336)
T ss_pred HHHcCCcccccCcEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999988876667789999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05279 Zn_ADH1 Liver alcohol dehydrogenase and related zinc-dependent alcohol dehydrogenases | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.2e-36 Score=272.73 Aligned_cols=307 Identities=19% Similarity=0.224 Sum_probs=243.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
+||+++.+. +++ +++++.++| ++++++|+||+.++++|++|++.+.+... ..+|.++|||++| +|+++
T Consensus 1 ~~a~~~~~~--~~~----~~~~~~~~p---~~~~~~vlv~v~~~~i~~~d~~~~~g~~~-~~~~~i~g~e~~G--~V~~v 68 (365)
T cd05279 1 CKAAVLWEK--GKP----LSIEEIEVA---PPKAGEVRIKVVATGVCHTDLHVIDGKLP-TPLPVILGHEGAG--IVESI 68 (365)
T ss_pred CceeEEecC--CCC----cEEEEeecC---CCCCCeEEEEEEEeeecchhHHHhcCCCC-CCCCcccccceeE--EEEEe
Confidence 367888877 544 677665554 56899999999999999999988887543 3456899999776 99999
Q ss_pred cCCCCCCCCCCEEEec---------------------------------------------------cccceeEeecCCc
Q 019332 87 DSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVTAPQ 115 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~~~~ 115 (342)
|++++.+++||+|++. |+|++|+.++.+.
T Consensus 69 G~~v~~~~~Gd~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~~a~~~~v~~~~ 148 (365)
T cd05279 69 GPGVTTLKPGDKVIPLFGPQCGKCKQCLNPRPNLCSKSRGTNGRGLMSDGTSRFTCKGKPIHHFLGTSTFAEYTVVSEIS 148 (365)
T ss_pred CCCcccCCCCCEEEEcCCCCCCCChhhcCCCcccCCCcccccccccccCCcceeeccCCccccccccccccceEEecCCc
Confidence 9999999999999864 5899999999999
Q ss_pred ceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHH
Q 019332 116 LFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLK 194 (342)
Q Consensus 116 ~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~ 194 (342)
++++ |++++.. +++.+.+++.+||+++...++++++++|||+| +|++|++++++|+..|++ |+++.+++++.+.++
T Consensus 149 ~~~l-P~~~~~~-~a~~~~~~~~ta~~al~~~~~~~~g~~vlI~g-~g~vG~~a~~~a~~~G~~~v~~~~~~~~~~~~~~ 225 (365)
T cd05279 149 LAKI-DPDAPLE-KVCLIGCGFSTGYGAAVNTAKVTPGSTCAVFG-LGGVGLSVIMGCKAAGASRIIAVDINKDKFEKAK 225 (365)
T ss_pred eEEC-CCCCCHH-HhhHhccchhHHHHHHHhccCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH
Confidence 9999 9995444 37788889999999987888999999999997 599999999999999995 777777999999998
Q ss_pred HHcCCCeeEecCCch-hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhh-hCCEEEEEceeccccCCCCccccchHHH
Q 019332 195 NKFGFDEAFNYKEEP-DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMK-IHGRIAVCGMISQYNLDRPEGVHNLMYL 271 (342)
Q Consensus 195 ~~~g~~~v~~~~~~~-~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~-~~G~~v~~g~~~~~~~~~~~~~~~~~~~ 271 (342)
++|+++++++++.. ++.+.+++.+++++|++||++|. ..+..++++++ ++|+++.+|..... .........+
T Consensus 226 -~~g~~~~v~~~~~~~~~~~~l~~~~~~~~d~vid~~g~~~~~~~~~~~l~~~~G~~v~~g~~~~~----~~~~~~~~~~ 300 (365)
T cd05279 226 -QLGATECINPRDQDKPIVEVLTEMTDGGVDYAFEVIGSADTLKQALDATRLGGGTSVVVGVPPSG----TEATLDPNDL 300 (365)
T ss_pred -HhCCCeecccccccchHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhccCCCEEEEEecCCCC----CceeeCHHHH
Confidence 99998888876531 45677777775589999999986 78889999999 99999998864311 0122333333
Q ss_pred HhcceeeecceecccccchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 272 VTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
.++.++.+.....+ ...+.+..+++++.++.+++. +..+++++++.+|++.+.+++.. |+++
T Consensus 301 -~~~~~l~g~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-~~~~ 364 (365)
T cd05279 301 -LTGRTIKGTVFGGW--KSKDSVPKLVALYRQKKFPLDELITHVLPFEEINDGFDLMRSGESI-RTIL 364 (365)
T ss_pred -hcCCeEEEEeccCC--chHhHHHHHHHHHHcCCcchhHheeeeecHHHHHHHHHHHhCCCce-eeee
Confidence 55666666543332 225678889999999998753 66678999999999999877654 6655
|
NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. There are 7 vertebrate ADH 7 classes, 6 of which have been identified in humans. Class III, glutathione-dependent formaldehyde dehydrogenase, has been identified as the primordial form and exists in diverse species, including plants, micro-organisms, vertebrates, and invertebrates. Class I, typified by liver dehydrogenase, is an evolving form. Gene duplication and functional specialization of ADH into ADH classes and subclasses created numerous forms in vertebrates. For example, the A, B and C (formerly alpha, beta, gamma) human class I subunits have high overall |
| >cd08287 FDH_like_ADH3 formaldehyde dehydrogenase (FDH)-like | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.8e-36 Score=270.79 Aligned_cols=303 Identities=18% Similarity=0.189 Sum_probs=242.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||+++++++ + ++++.+ +|.|.+++++||+||+.++++|++|+..+.|..+ ...|.++|||++| +|+++
T Consensus 1 m~~~~~~~~--~-----~~~~~~--~~~p~~~~~~ev~V~v~~~~i~~~d~~~~~g~~~-~~~~~~~g~e~~G--~V~~v 68 (345)
T cd08287 1 MRATVIHGP--G-----DIRVEE--VPDPVIEEPTDAVIRVVATCVCGSDLWPYRGVSP-TRAPAPIGHEFVG--VVEEV 68 (345)
T ss_pred CceeEEecC--C-----ceeEEe--CCCCCCCCCCeEEEEEeeeeecccchhhhcCCCC-CCCCcccccceEE--EEEEe
Confidence 588888765 3 346655 5556445899999999999999999988877543 2347899999776 99999
Q ss_pred cCCCCCCCCCCEEEe-c-----------------------------cccceeEeecCC--cceeecCCCCCccch----h
Q 019332 87 DSENPEFKKGDLVWG-M-----------------------------TGWEEYSLVTAP--QLFKIQHTDVPLSYY----T 130 (342)
Q Consensus 87 G~~v~~~~vGd~V~~-~-----------------------------g~~~~~~~v~~~--~~~~i~p~~~~~~~~----~ 130 (342)
|++++.+++||+|++ + |+|++|+.++.+ .++++ |++++.... .
T Consensus 69 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~~l-P~~l~~~~~~~~~~ 147 (345)
T cd08287 69 GSEVTSVKPGDFVIAPFAISDGTCPFCRAGFTTSCVHGGFWGAFVDGGQGEYVRVPLADGTLVKV-PGSPSDDEDLLPSL 147 (345)
T ss_pred CCCCCccCCCCEEEeccccCCCCChhhhCcCcccCCCCCcccCCCCCceEEEEEcchhhCceEEC-CCCCChhhhhhhhh
Confidence 999999999999986 1 788999999975 89999 998554111 1
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
+++...+.+|++++. .++++++++|+|.| +|++|++++|+|+..|++ ++++++++++.+.++ ++|++.+++++..
T Consensus 148 ~~l~~~~~~a~~~~~-~~~~~~g~~vlI~g-~g~vg~~~~~lak~~G~~~v~~~~~~~~~~~~~~-~~ga~~v~~~~~~- 223 (345)
T cd08287 148 LALSDVMGTGHHAAV-SAGVRPGSTVVVVG-DGAVGLCAVLAAKRLGAERIIAMSRHEDRQALAR-EFGATDIVAERGE- 223 (345)
T ss_pred HhhhcHHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCceEecCCcc-
Confidence 234467889999984 67899999999977 699999999999999995 888888888888888 8999999999887
Q ss_pred hHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
++.+.+.+.+++ ++|+++||+|+ ..+..++++++++|+++.+|..... ........+.+++++.+...
T Consensus 224 ~~~~~i~~~~~~~~~d~il~~~g~~~~~~~~~~~l~~~g~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~---- 293 (345)
T cd08287 224 EAVARVRELTGGVGADAVLECVGTQESMEQAIAIARPGGRVGYVGVPHGG------VELDVRELFFRNVGLAGGPA---- 293 (345)
T ss_pred cHHHHHHHhcCCCCCCEEEECCCCHHHHHHHHHhhccCCEEEEecccCCC------CccCHHHHHhcceEEEEecC----
Confidence 788889888876 89999999987 7889999999999999998865421 12233355778888876322
Q ss_pred cchHHHHHHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 288 HLYPKFLEMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
...+.++++++++.++.+++. +..+++++++++|++.+.+++.. |++|+
T Consensus 294 -~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~-k~~~~ 344 (345)
T cd08287 294 -PVRRYLPELLDDVLAGRINPGRVFDLTLPLDEVAEGYRAMDERRAI-KVLLR 344 (345)
T ss_pred -CcHHHHHHHHHHHHcCCCCHHHhEEeeecHHHHHHHHHHHhCCCce-EEEeC
Confidence 225678899999999998863 45678999999999998877654 98885
|
This group contains proteins identified as alcohol dehydrogenases and glutathione-dependant formaldehyde dehydrogenases (FDH) of the zinc-dependent/medium chain alcohol dehydrogenase family. The MDR family uses NAD(H) as a cofactor in the interconversion of alcohols and aldehydes, or ketones. FDH converts formaldehyde and NAD to formate and NADH. The initial step in this process the spontaneous formation of a S-(hydroxymethyl)glutathione adduct from formaldehyde and glutathione, followed by FDH-mediated oxidation (and detoxification) of the adduct to S-formylglutathione. The medium chain alcohol dehydrogenase family (MDR) has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08252 AL_MDR Arginate lyase and other MDR family members | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.9e-36 Score=269.79 Aligned_cols=312 Identities=21% Similarity=0.203 Sum_probs=249.2
Q ss_pred ccEEEEecccCCCCC-CCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPK-ETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~-~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||++++++ |.++ ++. +...++|.|. +.+++|+|++.++++|++|+..+.+..+...+|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~--~~~~~~~~--~~~~~~~~~~-~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G--~v~~ 73 (336)
T cd08252 1 MKAIGFTQP--LPITDPDS--LIDIELPKPV-PGGRDLLVRVEAVSVNPVDTKVRAGGAPVPGQPKILGWDASG--VVEA 73 (336)
T ss_pred CceEEecCC--CCCCcccc--eeEccCCCCC-CCCCEEEEEEEEEEcCHHHHHHHcCCCCCCCCCcccccceEE--EEEE
Confidence 479999998 7662 112 4445566664 589999999999999999998777654434457789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCC-----CC
Q 019332 86 LDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQ-----GE 154 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~-----~~ 154 (342)
+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+.+||+++.+.+.+.+ ++
T Consensus 74 ~G~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~l~~~~~~~~~~~~~g~ 151 (336)
T cd08252 74 VGSEVTLFKVGDEVYYAGDITRPGSNAEYQLVDERIVGHK-PKSLSFA-EAAALPLTSLTAWEALFDRLGISEDAENEGK 151 (336)
T ss_pred cCCCCCCCCCCCEEEEcCCCCCCccceEEEEEchHHeeeC-CCCCCHH-HhhhhhhHHHHHHHHHHHhcCCCCCcCCCCC
Confidence 99999999999999986 68999999999999999 9984443 377888999999999877788887 99
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG- 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 232 (342)
+|+|+|++|++|++++++|+..| ++|+++++++++.+.++ ++|++.+++++. ++.+.++....+++|++|||+|+
T Consensus 152 ~vlV~g~~g~vg~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~--~~~~~i~~~~~~~~d~vl~~~~~~ 228 (336)
T cd08252 152 TLLIIGGAGGVGSIAIQLAKQLTGLTVIATASRPESIAWVK-ELGADHVINHHQ--DLAEQLEALGIEPVDYIFCLTDTD 228 (336)
T ss_pred EEEEEcCCchHHHHHHHHHHHcCCcEEEEEcCChhhHHHHH-hcCCcEEEeCCc--cHHHHHHhhCCCCCCEEEEccCcH
Confidence 99999999999999999999999 89999999999999998 899988888774 56666765443489999999996
Q ss_pred hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----cc--chHHHHHHHHHHHHcCC
Q 019332 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YH--LYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 233 ~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~--~~~~~~~~~~~~~~~g~ 305 (342)
..+..++++++++|+++.+|.... ......++.+++++.+..+... ++ ...+.++++++++.++.
T Consensus 229 ~~~~~~~~~l~~~g~~v~~g~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (336)
T cd08252 229 QHWDAMAELIAPQGHICLIVDPQE--------PLDLGPLKSKSASFHWEFMFTRSMFQTPDMIEQHEILNEVADLLDAGK 300 (336)
T ss_pred HHHHHHHHHhcCCCEEEEecCCCC--------cccchhhhcccceEEEEEeeccccccccchhhHHHHHHHHHHHHHCCC
Confidence 788999999999999999986421 1222233356777766443321 11 23466888999999999
Q ss_pred ceeeeee---eeccccHHHHHHHHHcCCccceEEEE
Q 019332 306 IVYVEDM---AEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 306 ~~~~~~~---~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+.+.+.. .++++++++|++.+.++...||++++
T Consensus 301 l~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 336 (336)
T cd08252 301 LKTTLTETLGPINAENLREAHALLESGKTIGKIVLE 336 (336)
T ss_pred EecceeeeecCCCHHHHHHHHHHHHcCCccceEEeC
Confidence 9875332 36999999999999999888998863
|
This group contains a structure identified as an arginate lyase. Other members are identified quinone reductases, alginate lyases, and other proteins related to the zinc-dependent dehydrogenases/reductases. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, whil |
| >cd08253 zeta_crystallin Zeta-crystallin with NADP-dependent quinone reductase activity (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=8.3e-36 Score=266.57 Aligned_cols=314 Identities=25% Similarity=0.354 Sum_probs=257.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
||++++..+ +.| +.+.+. ++|.| .+.+++|+|++.++++|++|+..+.+... ....|.++|||++| +|++
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~--~~~~~-~l~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~ 71 (325)
T cd08253 1 MRAIRYHEF--GAP--DVLRLG--DLPVP-TPGPGEVLVRVHASGVNPVDTYIRAGAYPGLPPLPYVPGSDGAG--VVEA 71 (325)
T ss_pred CceEEEccc--CCc--ccceee--ecCCC-CCCCCEEEEEEEEEecChhHhhhccCCCCCCCCCCeecccceEE--EEEe
Confidence 478888877 655 334554 45656 46899999999999999999988877543 23467889999776 9999
Q ss_pred ecCCCCCCCCCCEEEec--------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 86 LDSENPEFKKGDLVWGM--------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~--------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+|++++++++||+|+++ |++++|+.++.+.++++ |++++.. +++.+++++.+|++++....++.++++++
T Consensus 72 ~g~~~~~~~~Gd~v~~~~~~~~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~aa~~~~~~~~a~~~l~~~~~~~~g~~vl 149 (325)
T cd08253 72 VGEGVDGLKVGDRVWLTNLGWGRRQGTAAEYVVVPADQLVPL-PDGVSFE-QGAALGIPALTAYRALFHRAGAKAGETVL 149 (325)
T ss_pred eCCCCCCCCCCCEEEEeccccCCCCcceeeEEEecHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhCCCCCCEEE
Confidence 99999999999999984 68999999999999999 9984444 37888999999999998878999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLD 236 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 236 (342)
|+|+++++|++++++++..|++|+++++++++.+.++ ++|++.+++.... ++.+.+.+.+.+ ++|+++||.|+....
T Consensus 150 I~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~ 227 (325)
T cd08253 150 VHGGSGAVGHAAVQLARWAGARVIATASSAEGAELVR-QAGADAVFNYRAE-DLADRILAATAGQGVDVIIEVLANVNLA 227 (325)
T ss_pred EEcCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHHHHHHHcCCCceEEEEECCchHHHH
Confidence 9999999999999999999999999999999999998 8999888888876 788888887766 899999999998888
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeec
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEG 315 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~ 315 (342)
..+++++++|+++.++.... ........++.++.++.+...... +....+.++.+.+++.++.+++.+...++
T Consensus 228 ~~~~~l~~~g~~v~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 301 (325)
T cd08253 228 KDLDVLAPGGRIVVYGSGGL------RGTIPINPLMAKEASIRGVLLYTATPEERAAAAEAIAAGLADGALRPVIAREYP 301 (325)
T ss_pred HHHHhhCCCCEEEEEeecCC------cCCCChhHHHhcCceEEeeehhhcCHHHHHHHHHHHHHHHHCCCccCccccEEc
Confidence 89999999999999987441 111223334566777666543322 23445667788888999988877777889
Q ss_pred cccHHHHHHHHHcCCccceEEEEe
Q 019332 316 LESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 316 l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++++.++++.+.++...||+++++
T Consensus 302 ~~~~~~~~~~~~~~~~~~kvv~~~ 325 (325)
T cd08253 302 LEEAAAAHEAVESGGAIGKVVLDP 325 (325)
T ss_pred HHHHHHHHHHHHcCCCcceEEEeC
Confidence 999999999999988899999863
|
Zeta-crystallin is a eye lens protein with NADP-dependent quinone reductase activity (QOR). It has been cited as a structural component in mammalian eyes, but also has homology to quinone reductases in unrelated species. QOR catalyzes the conversion of a quinone and NAD(P)H to a hydroquinone and NAD(P+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. Alcohol dehydrogenase in the liver converts |
| >cd05286 QOR2 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-35 Score=265.27 Aligned_cols=313 Identities=23% Similarity=0.310 Sum_probs=253.6
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEec
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG 87 (342)
+||.+... +.+ ..+.+.+ .+.| ++++++|+||+.++++|+.|+....+..+. .+|.++|||++| +|+.+|
T Consensus 1 ~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~~~~~~-~~~~~~g~e~~G--~v~~~g 70 (320)
T cd05286 1 KAVRIHKT--GGP--EVLEYED--VPVP-EPGPGEVLVRNTAIGVNFIDTYFRSGLYPL-PLPFVLGVEGAG--VVEAVG 70 (320)
T ss_pred CeEEEecC--CCc--cceEEee--cCCC-CCCCCEEEEEEEEeecCHHHHHHhcCCCCC-CCCccCCcceeE--EEEEEC
Confidence 46666655 544 3445544 4444 568999999999999999999887765432 346789999776 999999
Q ss_pred CCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcH
Q 019332 88 SENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGA 164 (342)
Q Consensus 88 ~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~ 164 (342)
++++++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+.++++++.+.++++++++|+|+|++|+
T Consensus 71 ~~~~~~~~G~~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~g~~vlI~g~~g~ 148 (320)
T cd05286 71 PGVTGFKVGDRVAYAGPPGAYAEYRVVPASRLVKL-PDGISDE-TAAALLLQGLTAHYLLRETYPVKPGDTVLVHAAAGG 148 (320)
T ss_pred CCCCCCCCCCEEEEecCCCceeEEEEecHHHceeC-CCCCCHH-HHhhccchHHHHHHHHHHhcCCCCCCEEEEEcCCch
Confidence 999999999999985 68999999999999999 9984444 377788899999999988889999999999999999
Q ss_pred HHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhh
Q 019332 165 VGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMK 243 (342)
Q Consensus 165 vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~ 243 (342)
+|++++++++.+|++|+++++++++.+.++ ++|++.+++.... ++.+.+++.+.+ ++|+++||.++.....++++++
T Consensus 149 ~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vl~~~~~~~~~~~~~~l~ 226 (320)
T cd05286 149 VGLLLTQWAKALGATVIGTVSSEEKAELAR-AAGADHVINYRDE-DFVERVREITGGRGVDVVYDGVGKDTFEGSLDSLR 226 (320)
T ss_pred HHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HCCCCEEEeCCch-hHHHHHHHHcCCCCeeEEEECCCcHhHHHHHHhhc
Confidence 999999999999999999999999999997 8999888888776 788888888876 8999999999988889999999
Q ss_pred hCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc---ccchHHHHHHHHHHHHcCCceeeeeeeeccccHH
Q 019332 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAP 320 (342)
Q Consensus 244 ~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~ 320 (342)
++|+++.+|..... ........+..+++++.+.....+ +....+.+.++++++.++.+.+.+...|+++++.
T Consensus 227 ~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~ 301 (320)
T cd05286 227 PRGTLVSFGNASGP-----VPPFDLLRLSKGSLFLTRPSLFHYIATREELLARAAELFDAVASGKLKVEIGKRYPLADAA 301 (320)
T ss_pred cCcEEEEEecCCCC-----CCccCHHHHHhcCcEEEEEehhhhcCCHHHHHHHHHHHHHHHHCCCCcCcccceEcHHHHH
Confidence 99999999864431 111222333367777765433222 2334456778899999999887766778999999
Q ss_pred HHHHHHHcCCccceEEEEe
Q 019332 321 ATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 321 ~a~~~~~~~~~~gkvvv~~ 339 (342)
++++.+.++...+|+++++
T Consensus 302 ~a~~~~~~~~~~~~vv~~~ 320 (320)
T cd05286 302 QAHRDLESRKTTGKLLLIP 320 (320)
T ss_pred HHHHHHHcCCCCceEEEeC
Confidence 9999999988889999863
|
Quinone oxidoreductase (QOR) and 2-haloacrylate reductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. 2-haloacrylate reductase, a member of this subgroup, catalyzes the NADPH-dependent reduction of a carbon-carbon double bond in organohalogen compounds. Although similar to QOR, Burkholderia 2-haloacrylate reductase does not act on the quinones 1,4-benzoquinone |
| >cd08266 Zn_ADH_like1 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.8e-35 Score=266.45 Aligned_cols=310 Identities=24% Similarity=0.314 Sum_probs=254.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.+. +.+ ..+++.+. +.| ++.+++|+|++.++++|++|++.+.|... ....|.++|||++| +|+.
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~~--~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~ 71 (342)
T cd08266 1 MKAVVIRGH--GGP--EVLEYGDL--PEP-EPGPDEVLVRVKAAALNHLDLWVRRGMPGIKLPLPHILGSDGAG--VVEA 71 (342)
T ss_pred CeEEEEecC--CCc--cceeEeec--CCC-CCCCCeEEEEEEeeecCHHHHHHhcCCCCCCCCCCeecccceEE--EEEE
Confidence 478888866 555 34566554 444 56899999999999999999988877542 23447789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 86 LDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
+|++++.+++||+|++. |+|++|+.++.+.++++ |++++.. +++.++.
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~ 149 (342)
T cd08266 72 VGPGVTNVKPGQRVVIYPGISCGRCEYCLAGRENLCAQYGILGEHVDGGYAEYVAVPARNLLPI-PDNLSFE-EAAAAPL 149 (342)
T ss_pred eCCCCCCCCCCCEEEEccccccccchhhccccccccccccccccccCcceeEEEEechHHceeC-CCCCCHH-HHHhhhh
Confidence 99999999999999874 67999999999999999 9984443 3777888
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
.+.+|++++.+..++.++++++|+|+++++|++++++++..|++|+.+++++++.+.++ .++.+.+++..+. ++.+.+
T Consensus 150 ~~~~a~~~l~~~~~~~~~~~vlI~g~~~~iG~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~~~~~-~~~~~~ 227 (342)
T cd08266 150 TFLTAWHMLVTRARLRPGETVLVHGAGSGVGSAAIQIAKLFGATVIATAGSEDKLERAK-ELGADYVIDYRKE-DFVREV 227 (342)
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCeEEecCCh-HHHHHH
Confidence 89999999878888999999999999999999999999999999999999999988887 7888777877766 777777
Q ss_pred HHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 216 KRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
.+.+.+ ++|+++|++|+..+...+++++++|+++.++..... .........+.+++++.+..... ...+
T Consensus 228 ~~~~~~~~~d~~i~~~g~~~~~~~~~~l~~~G~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 297 (342)
T cd08266 228 RELTGKRGVDVVVEHVGAATWEKSLKSLARGGRLVTCGATTGY-----EAPIDLRHVFWRQLSILGSTMGT-----KAEL 297 (342)
T ss_pred HHHhCCCCCcEEEECCcHHHHHHHHHHhhcCCEEEEEecCCCC-----CCCcCHHHHhhcceEEEEEecCC-----HHHH
Confidence 777765 899999999998889999999999999999875442 11223334566777777765443 4578
Q ss_pred HHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
..+++++.++.+.+.+...|+++++++|++.+.++...+|++++.
T Consensus 298 ~~~~~~l~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~kvv~~~ 342 (342)
T cd08266 298 DEALRLVFRGKLKPVIDSVFPLEEAAEAHRRLESREQFGKIVLTP 342 (342)
T ss_pred HHHHHHHHcCCcccceeeeEcHHHHHHHHHHHHhCCCCceEEEeC
Confidence 888999999998887777889999999999999888889999863
|
This group contains proteins related to the zinc-dependent alcohol dehydrogenases. However, while the group has structural zinc site characteristic of these enzymes, it lacks the consensus site for a catalytic zinc. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the close contact of the coenzyme with the ADH backbone |
| >cd08247 AST1_like AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast | Back alignment and domain information |
|---|
Probab=100.00 E-value=7.9e-36 Score=270.03 Aligned_cols=319 Identities=20% Similarity=0.207 Sum_probs=239.5
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCcc-ccCCCCCcccccEEEEEe
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYV-ESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~-~p~~~G~e~~G~g~v~~v 86 (342)
|+|++.+. ++| ++++..++|.|+.+++++|+||+.++++|++|+..+.+...... .|.++|+|++| +|+++
T Consensus 2 ~~~~~~~~--~~~----~~~~~~~~~~p~~~~~~~v~I~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~V~~v 73 (352)
T cd08247 2 KALTFKNN--TSP----LTITTIKLPLPNCYKDNEIVVKVHAAALNPVDLKLYNSYTFHFKVKEKGLGRDYSG--VIVKV 73 (352)
T ss_pred ceEEEecC--CCc----ceeeccCCCCCCCCCCCeEEEEEEEEecChHhHHHhcccccccccCCCccCceeEE--EEEEe
Confidence 68889888 777 47888888877656999999999999999999877654221111 36789999776 99999
Q ss_pred cCCCC-CCCCCCEEEec--------cccceeEeecCC----cceeecCCCCCccchhhccCCchhhHHHhhhhhc-CCCC
Q 019332 87 DSENP-EFKKGDLVWGM--------TGWEEYSLVTAP----QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVC-SPKQ 152 (342)
Q Consensus 87 G~~v~-~~~vGd~V~~~--------g~~~~~~~v~~~----~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~-~~~~ 152 (342)
|++++ .|++||+|+++ |+|++|+.++.. .++++ |++++.. +++.++..+.|||+++...+ ++++
T Consensus 74 G~~v~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~~~~l-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~ 151 (352)
T cd08247 74 GSNVASEWKVGDEVCGIYPHPYGGQGTLSQYLLVDPKKDKKSITRK-PENISLE-EAAAWPLVLGTAYQILEDLGQKLGP 151 (352)
T ss_pred CcccccCCCCCCEEEEeecCCCCCCceeeEEEEEccccccceeEEC-CCCCCHH-HHHHhHHHHHHHHHHHHHhhhccCC
Confidence 99998 89999999985 689999999998 68999 9984444 37788899999999997777 7999
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHc-CC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchh---HHHHHHH-HCCC-CccE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLL-GC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD---LNEALKR-YFPE-GIDI 225 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~-ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~~~~i~~-~~~~-~~d~ 225 (342)
|++|+|+|+++++|++++++|+.. +. +|+++.+ +++.+.++ ++|++.++++++. + +...+.+ .+++ ++|+
T Consensus 152 g~~vlI~ga~~~vg~~~~~~a~~~~~~~~v~~~~~-~~~~~~~~-~~g~~~~i~~~~~-~~~~~~~~~~~~~~~~~~~d~ 228 (352)
T cd08247 152 DSKVLVLGGSTSVGRFAIQLAKNHYNIGTVVGTCS-SRSAELNK-KLGADHFIDYDAH-SGVKLLKPVLENVKGQGKFDL 228 (352)
T ss_pred CCeEEEECCCchHHHHHHHHHHhcCCcceEEEEeC-hhHHHHHH-HhCCCEEEecCCC-cccchHHHHHHhhcCCCCceE
Confidence 999999999999999999999987 55 6777764 55556777 8999889988765 4 4444444 4424 8999
Q ss_pred EEeCCCh-hhHHHHHHhhh---hCCEEEEEceeccccCCCCc-----cccchHHHHhcceeeecceeccc-ccchHHHHH
Q 019332 226 YFENVGG-KMLDAVLLNMK---IHGRIAVCGMISQYNLDRPE-----GVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLE 295 (342)
Q Consensus 226 vid~~g~-~~~~~~~~~l~---~~G~~v~~g~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~ 295 (342)
+|||.|+ .....++++++ ++|+++.++...+.+..... ........+.+++.+........ .....+.+.
T Consensus 229 vl~~~g~~~~~~~~~~~l~~~~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 308 (352)
T cd08247 229 ILDCVGGYDLFPHINSILKPKSKNGHYVTIVGDYKANYKKDTFNSWDNPSANARKLFGSLGLWSYNYQFFLLDPNADWIE 308 (352)
T ss_pred EEECCCCHHHHHHHHHHhCccCCCCEEEEEeCCCcccccchhhhhccccchhhhhhhhhhcCCCcceEEEEecCCHHHHH
Confidence 9999998 67888999999 99999987432211000000 00000111222332222221110 111136688
Q ss_pred HHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 296 MIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 296 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+++++.++.+++.+...++++++++|++.+.+++..||+++++
T Consensus 309 ~~~~~~~~~~l~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvi~~ 352 (352)
T cd08247 309 KCAELIADGKVKPPIDSVYPFEDYKEAFERLKSNRAKGKVVIKV 352 (352)
T ss_pred HHHHHHhCCCeEeeeccEecHHHHHHHHHHHHcCCCCCcEEEeC
Confidence 89999999999877777889999999999999998889999863
|
This group contains members identified in targeting of yeast membrane proteins ATPase. AST1 is a cytoplasmic protein associated with the periplasmic membrane in yeast, identified as a multicopy suppressor of pma1 mutants which cause temperature sensitive growth arrest due to the inability of ATPase to target to the cell surface. This family is homologous to the medium chain family of dehydrogenases and reductases. Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-termi |
| >cd08288 MDR_yhdh Yhdh putative quinone oxidoreductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=264.89 Aligned_cols=310 Identities=21% Similarity=0.248 Sum_probs=244.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ |+| +.+++++. |.| ++++++|+||+.++++|++|...+.|... ...+|.++|||++| +|+.
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~~--~~p-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~V~~ 71 (324)
T cd08288 1 FKALVLEKD--DGG--TSAELREL--DES-DLPEGDVTVEVHYSTLNYKDGLAITGKGGIVRTFPLVPGIDLAG--TVVE 71 (324)
T ss_pred CeeEEEecc--CCC--cceEEEEC--CCC-CCCCCeEEEEEEEEecCHHHHHHhcCCccccCCCCCccccceEE--EEEe
Confidence 589999988 776 45667665 445 56899999999999999999988777542 12347789999776 8877
Q ss_pred ecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhh--hcCCC-CC
Q 019332 86 LDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYE--VCSPK-QG 153 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~--~~~~~-~~ 153 (342)
++++++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++..+++|++++.. ..... ++
T Consensus 72 --~~~~~~~~Gd~V~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~~ 147 (324)
T cd08288 72 --SSSPRFKPGDRVVLTGWGVGERHWGGYAQRARVKADWLVPL-PEGLSAR-QAMAIGTAGFTAMLCVMALEDHGVTPGD 147 (324)
T ss_pred --CCCCCCCCCCEEEECCccCCCCCCCcceeEEEEchHHeeeC-CCCCCHH-HHhhhhhHHHHHHHHHHHHhhcCcCCCC
Confidence 777889999999984 78999999999999999 9984433 377888899999877641 13444 67
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
++|+|+|++|++|++++|+|+.+|++|++++.++++.+.++ ++|++.++++++. . ..++..+.+++|.++|++++.
T Consensus 148 ~~vlI~ga~g~vg~~~~~~A~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~--~~~~~~~~~~~~~~~d~~~~~ 223 (324)
T cd08288 148 GPVLVTGAAGGVGSVAVALLARLGYEVVASTGRPEEADYLR-SLGASEIIDRAEL-S--EPGRPLQKERWAGAVDTVGGH 223 (324)
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCEEEEcchh-h--HhhhhhccCcccEEEECCcHH
Confidence 89999999999999999999999999999999999999998 9999999988653 3 255555555789999999987
Q ss_pred hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeee
Q 019332 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDM 312 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~ 312 (342)
.+...+.+++.+|+++.+|.....+. ......++.+++++.+...... .+...+.++.+.+++.++.+++ +..
T Consensus 224 ~~~~~~~~~~~~g~~~~~G~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-i~~ 297 (324)
T cd08288 224 TLANVLAQTRYGGAVAACGLAGGADL-----PTTVMPFILRGVTLLGIDSVMAPIERRRAAWARLARDLDPALLEA-LTR 297 (324)
T ss_pred HHHHHHHHhcCCCEEEEEEecCCCCC-----CcchhhhhccccEEEEEEeecccchhhHHHHHHHHHHHhcCCccc-cce
Confidence 77788899999999999997532111 1223334467888887653322 2234567788888888988876 456
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEe
Q 019332 313 AEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 313 ~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.++++++++|++.+.+++..||+++++
T Consensus 298 ~~~~~~~~~a~~~~~~~~~~~~vvv~~ 324 (324)
T cd08288 298 EIPLADVPDAAEAILAGQVRGRVVVDV 324 (324)
T ss_pred eecHHHHHHHHHHHhcCCccCeEEEeC
Confidence 789999999999999999999999864
|
Yhdh putative quinone oxidoreductases (QOR). QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catal |
| >cd05276 p53_inducible_oxidoreductase PIG3 p53-inducible quinone oxidoreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-35 Score=265.45 Aligned_cols=313 Identities=27% Similarity=0.382 Sum_probs=255.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.+. +.+ +.+++.+ .+.| ++.+++|+||+.++++|+.|+....+..+ ....|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~ 71 (323)
T cd05276 1 MKAIVIKEP--GGP--EVLELGE--VPKP-APGPGEVLIRVAAAGVNRADLLQRQGLYPPPPGASDILGLEVAG--VVVA 71 (323)
T ss_pred CeEEEEecC--CCc--ccceEEe--cCCC-CCCCCEEEEEEEEeecCHHHHHHhCCCCCCCCCCCCcccceeEE--EEEe
Confidence 589999887 655 3455654 4444 56899999999999999999987766442 23356889999666 9999
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.++++++.+...+.++++|+|+|++
T Consensus 72 vg~~~~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~l~~~~~~a~~~~~~~~~~~~~~~vlv~g~~ 149 (323)
T cd05276 72 VGPGVTGWKVGDRVCALLAGGGYAEYVVVPAGQLLPV-PEGLSLV-EAAALPEVFFTAWQNLFQLGGLKAGETVLIHGGA 149 (323)
T ss_pred eCCCCCCCCCCCEEEEecCCCceeEEEEcCHHHhccC-CCCCCHH-HHhhchhHHHHHHHHHHHhcCCCCCCEEEEEcCc
Confidence 99999999999999997 78999999999999999 9984333 3778889999999998887889999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++++++..|++|+++.+++++.+.++ ++|++.++++... ++.+.+.+.+.+ ++|+++|+.|+......+++
T Consensus 150 ~~ig~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~ 227 (323)
T cd05276 150 SGVGTAAIQLAKALGARVIATAGSEEKLEACR-ALGADVAINYRTE-DFAEEVKEATGGRGVDVILDMVGGDYLARNLRA 227 (323)
T ss_pred ChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEeCCch-hHHHHHHHHhCCCCeEEEEECCchHHHHHHHHh
Confidence 99999999999999999999999999989887 8998888888776 778888877766 89999999999778889999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
++++|+++.+|..+..+ .......++.+++++.+...... +......+.++++++.++.+.+.....|++
T Consensus 228 ~~~~g~~i~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (323)
T cd05276 228 LAPDGRLVLIGLLGGAK-----AELDLAPLLRKRLTLTGSTLRSRSLEEKAALAAAFREHVWPLFASGRIRPVIDKVFPL 302 (323)
T ss_pred hccCCEEEEEecCCCCC-----CCCchHHHHHhCCeEEEeeccchhhhccHHHHHHHHHHHHHHHHCCCccCCcceEEcH
Confidence 99999999998754321 12233444567888877665432 222345677888999999988777778899
Q ss_pred ccHHHHHHHHHcCCccceEEE
Q 019332 317 ESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv 337 (342)
++++++++.+.++...||+++
T Consensus 303 ~~~~~a~~~~~~~~~~~kvv~ 323 (323)
T cd05276 303 EEAAEAHRRMESNEHIGKIVL 323 (323)
T ss_pred HHHHHHHHHHHhCCCcceEeC
Confidence 999999999998888888874
|
PIG3 p53-inducible quinone oxidoreductase, a medium chain dehydrogenase/reductase family member, acts in the apoptotic pathway. PIG3 reduces ortho-quinones, but its apoptotic activity has been attributed to oxidative stress generation, since overexpression of PIG3 accumulates reactive oxygen species. PIG3 resembles the MDR family member quinone reductases, which catalyze the reduction of quinone to hydroxyquinone. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding |
| >cd05281 TDH Threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-35 Score=266.68 Aligned_cols=303 Identities=21% Similarity=0.241 Sum_probs=238.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC---CCccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK---GSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~g~v 83 (342)
||||++.+. |+. +.+.+ .|.| .+++++++||+.++++|+.|+..+.+.. ....+|.++|+|++| +|
T Consensus 1 ~~~~~~~~~--~~~----~~~~~--~~~~-~~~~~~v~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G--~V 69 (341)
T cd05281 1 MKAIVKTKA--GPG----AELVE--VPVP-KPGPGEVLIKVLAASICGTDVHIYEWDEWAQSRIKPPLIFGHEFAG--EV 69 (341)
T ss_pred CcceEEecC--CCc----eEEEe--CCCC-CCCCCeEEEEEEEEEEcccchHHHcCCCCccccCCCCcccccceEE--EE
Confidence 578988877 532 56655 5555 4589999999999999999987754421 223456789999776 99
Q ss_pred EEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhcc
Q 019332 84 KVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l 133 (342)
+.+|++++.+++||+|+++ |+|++|++++.+.++++ |+++ +.+++++
T Consensus 70 ~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~l-P~~~--~~~~a~~ 146 (341)
T cd05281 70 VEVGEGVTRVKVGDYVSAETHIVCGKCYQCRTGNYHVCQNTKILGVDTDGCFAEYVVVPEENLWKN-DKDI--PPEIASI 146 (341)
T ss_pred EEECCCCCCCCCCCEEEECCccCCCCChHHHCcCcccCcccceEeccCCCcceEEEEechHHcEEC-cCCC--CHHHhhh
Confidence 9999999999999999873 78999999999999999 9984 4445677
Q ss_pred CCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
+.++.++++++. ...+++++|||+|+ |++|++++|+|+..|+ +|+++.++++|.+.++ ++|++++++++.. ++.
T Consensus 147 ~~~~~~a~~~~~--~~~~~g~~vlV~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~ 221 (341)
T cd05281 147 QEPLGNAVHTVL--AGDVSGKSVLITGC-GPIGLMAIAVAKAAGASLVIASDPNPYRLELAK-KMGADVVINPREE-DVV 221 (341)
T ss_pred hhHHHHHHHHHH--hcCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCcceeeCcccc-cHH
Confidence 788889998874 45678999999875 9999999999999999 7999988888888888 8999888888776 777
Q ss_pred HHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccch
Q 019332 213 EALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLY 290 (342)
Q Consensus 213 ~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
.+++.+++ ++|++|||+|+ .....++++|+++|+++.+|..... . ..........+++.+.+... ...
T Consensus 222 -~~~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-~----~~~~~~~~~~~~~~~~~~~~----~~~ 291 (341)
T cd05281 222 -EVKSVTDGTGVDVVLEMSGNPKAIEQGLKALTPGGRVSILGLPPGP-V----DIDLNNLVIFKGLTVQGITG----RKM 291 (341)
T ss_pred -HHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccCCCC-c----ccccchhhhccceEEEEEec----CCc
Confidence 88887776 89999999987 6788999999999999998864331 1 11112234556666655432 122
Q ss_pred HHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 291 PKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 291 ~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+.+.++++++.++.+.+ .+...++++++++|++.+.+++ .||+|+++
T Consensus 292 ~~~~~~~~~~l~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~-~gk~vv~~ 341 (341)
T cd05281 292 FETWYQVSALLKSGKVDLSPVITHKLPLEDFEEAFELMRSGK-CGKVVLYP 341 (341)
T ss_pred chhHHHHHHHHHcCCCChhHheEEEecHHHHHHHHHHHhcCC-CceEEecC
Confidence 345678899999998863 3556679999999999999998 89999863
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine via NAD(H)- dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria) and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08269 Zn_ADH9 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.1e-35 Score=262.85 Aligned_cols=296 Identities=19% Similarity=0.152 Sum_probs=237.2
Q ss_pred CceEEEEeeccccCCCCCCcEEEEEEeeecCccccccc-ccCCC--CccccCCCCCcccccEEEEEecCCCCCCCCCCEE
Q 019332 23 TDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRM-TNIKG--SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLV 99 (342)
Q Consensus 23 ~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~-~~~~~--~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V 99 (342)
+.+++++. |.| ++.+++|+||+.++++|+.|+..+ .+... .+.+|.++|+|++| +|+.+|++++++++||+|
T Consensus 5 ~~~~~~~~--~~~-~l~~~ev~v~v~~~~i~~~d~~~~~~g~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd~V 79 (312)
T cd08269 5 GRFEVEEH--PRP-TPGPGQVLVRVEGCGVCGSDLPAFNQGRPWFVYPAEPGGPGHEGWG--RVVALGPGVRGLAVGDRV 79 (312)
T ss_pred CeeEEEEC--CCC-CCCCCeEEEEEEEeeecccchHHHccCCCCcccCCCCcccceeeEE--EEEEECCCCcCCCCCCEE
Confidence 34666654 445 568999999999999999999877 55432 12247889999665 999999999999999999
Q ss_pred Eec--cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC
Q 019332 100 WGM--TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLG 177 (342)
Q Consensus 100 ~~~--g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g 177 (342)
+++ |+|++|+.++.+.++++ |+++ . .++.+..+++++++++. .++++++++|+|+| +|++|.+++++|+..|
T Consensus 80 ~~~~~g~~~~~~~v~~~~~~~l-P~~~--~-~~~~~~~~~~~a~~~~~-~~~~~~~~~vlI~g-~g~vg~~~~~la~~~g 153 (312)
T cd08269 80 AGLSGGAFAEYDLADADHAVPL-PSLL--D-GQAFPGEPLGCALNVFR-RGWIRAGKTVAVIG-AGFIGLLFLQLAAAAG 153 (312)
T ss_pred EEecCCcceeeEEEchhheEEC-CCch--h-hhHHhhhhHHHHHHHHH-hcCCCCCCEEEEEC-CCHHHHHHHHHHHHcC
Confidence 986 79999999999999999 9984 2 23332378889999985 78899999999997 5999999999999999
Q ss_pred CE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEcee
Q 019332 178 CY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 178 a~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
++ |+++++++++.++++ ++|++.+++++.. ++.+.+.+.+.+ ++|+++||.|+ ..+..++++|+++|+++.+|..
T Consensus 154 ~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~g~~~~~g~~ 231 (312)
T cd08269 154 ARRVIAIDRRPARLALAR-ELGATEVVTDDSE-AIVERVRELTGGAGADVVIEAVGHQWPLDLAGELVAERGRLVIFGYH 231 (312)
T ss_pred CcEEEEECCCHHHHHHHH-HhCCceEecCCCc-CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEccC
Confidence 98 999999998988888 8999888887776 788889888876 89999999987 6788999999999999999865
Q ss_pred ccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCc-
Q 019332 255 SQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRN- 331 (342)
Q Consensus 255 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~- 331 (342)
... ...........++..+.++.... +....+.++++++++.++.+.+ .+..+++++++++|++.+.+++.
T Consensus 232 ~~~-----~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~~~~~ 305 (312)
T cd08269 232 QDG-----PRPVPFQTWNWKGIDLINAVERD-PRIGLEGMREAVKLIADGRLDLGSLLTHEFPLEELGDAFEAARRRPDG 305 (312)
T ss_pred CCC-----CcccCHHHHhhcCCEEEEecccC-ccchhhHHHHHHHHHHcCCCCchhheeeeecHHHHHHHHHHHHhCCCC
Confidence 321 11223334556666665543322 2333577899999999999886 35667899999999999999864
Q ss_pred cceEEE
Q 019332 332 VGKQVV 337 (342)
Q Consensus 332 ~gkvvv 337 (342)
++|+++
T Consensus 306 ~~~~~~ 311 (312)
T cd08269 306 FIKGVI 311 (312)
T ss_pred ceEEEe
Confidence 688876
|
The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydrogenases (ADHs) catalyze the NAD(P)(H)-dependent i |
| >cd08248 RTN4I1 Human Reticulon 4 Interacting Protein 1 | Back alignment and domain information |
|---|
Probab=100.00 E-value=7e-36 Score=270.26 Aligned_cols=318 Identities=25% Similarity=0.321 Sum_probs=239.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---------------CccccC
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---------------SYVESF 71 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---------------~~~~p~ 71 (342)
|||++++++ |+|. +.+.+++ .|.|.+.++++|+||+.++++|++|+..+.|... ....|.
T Consensus 1 ~~a~~~~~~--~~~~-~~~~~~~--~~~p~~~~~~ev~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~~~~~~~~~p~ 75 (350)
T cd08248 1 MKAWQIHSY--GGID-SLLLLEN--ARIPVIRKPNQVLIKVHAASVNPIDVLMRSGYGRTLLNKKRKPQSCKYSGIEFPL 75 (350)
T ss_pred CceEEeccc--CCCc-ceeeecc--cCCCCCCCCCeEEEEEEEEecCchhHHHHcCCccchhhhhhccccccccCCCCCe
Confidence 588999888 7762 2356655 5555332599999999999999999988776311 234578
Q ss_pred CCCCcccccEEEEEecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhh
Q 019332 72 KPGMPISGYGVAKVLDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFY 145 (342)
Q Consensus 72 ~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~ 145 (342)
++|||++| +|+.+|++++++++||+|+++ |+|++|+.++.+.++++ |++++.. .++.+++.+.|||+++.
T Consensus 76 ~~G~e~~G--~v~~vG~~v~~~~~Gd~V~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~~~~~-~aa~~~~~~~ta~~~l~ 151 (350)
T cd08248 76 TLGRDCSG--VVVDIGSGVKSFEIGDEVWGAVPPWSQGTHAEYVVVPENEVSKK-PKNLSHE-EAASLPYAGLTAWSALV 151 (350)
T ss_pred eecceeEE--EEEecCCCcccCCCCCEEEEecCCCCCccceeEEEecHHHeecC-CCCCCHH-HHhhchhHHHHHHHHHH
Confidence 99999776 999999999999999999984 88999999999999999 9984443 37788999999999997
Q ss_pred hhcCCCC----CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC
Q 019332 146 EVCSPKQ----GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 146 ~~~~~~~----~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
+.+.+.+ |++|+|+|++|++|++++++|+..|++|+++.++ ++.+.++ ++|.+.+++..+. ++.+.+... +
T Consensus 152 ~~~~~~~~~~~g~~vlI~g~~g~ig~~~~~~a~~~G~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~~~l~~~--~ 226 (350)
T cd08248 152 NVGGLNPKNAAGKRVLILGGSGGVGTFAIQLLKAWGAHVTTTCST-DAIPLVK-SLGADDVIDYNNE-DFEEELTER--G 226 (350)
T ss_pred HhccCCCccCCCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCc-chHHHHH-HhCCceEEECCCh-hHHHHHHhc--C
Confidence 7777754 9999999999999999999999999999988865 5667777 8999888888765 565555432 3
Q ss_pred CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCC-Cc--ccc-chHHHHhcceee--eccee-cccccchHHHH
Q 019332 222 GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDR-PE--GVH-NLMYLVTKRVRM--EGFLV-RDYYHLYPKFL 294 (342)
Q Consensus 222 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~-~~--~~~-~~~~~~~~~~~~--~~~~~-~~~~~~~~~~~ 294 (342)
++|++|||.|+.....++++++++|+++.+|......... .. ... ....+....... ..... ..........+
T Consensus 227 ~vd~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (350)
T cd08248 227 KFDVILDTVGGDTEKWALKLLKKGGTYVTLVSPLLKNTDKLGLVGGMLKSAVDLLKKNVKSLLKGSHYRWGFFSPSGSAL 306 (350)
T ss_pred CCCEEEECCChHHHHHHHHHhccCCEEEEecCCcccccccccccchhhhhHHHHHHHHHHHHhcCCCeeEEEECCCHHHH
Confidence 7999999999988899999999999999998643211000 00 000 000111111110 00000 00012235678
Q ss_pred HHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
.++++++.++.+.+.+...++++++.++++.+.+++..+|++++
T Consensus 307 ~~~~~~~~~g~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~vv~~ 350 (350)
T cd08248 307 DELAKLVEDGKIKPVIDKVFPFEEVPEAYEKVESGHARGKTVIK 350 (350)
T ss_pred HHHHHHHhCCCEecccceeecHHHHHHHHHHHhcCCCceEEEeC
Confidence 89999999999987777788999999999999988878888863
|
Human Reticulon 4 Interacting Protein 1 is a member of the medium chain dehydrogenase/ reductase (MDR) family. Riticulons are endoplasmic reticulum associated proteins involved in membrane trafficking and neuroendocrine secretion. The MDR/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. |
| >cd08298 CAD2 Cinnamyl alcohol dehydrogenases (CAD) | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.6e-35 Score=263.35 Aligned_cols=297 Identities=21% Similarity=0.171 Sum_probs=237.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||++++.+. +.|..+.+++.+.+. | .+++++|+||+.++++|++|+..+.|..+....|.++|||++| +|+.+
T Consensus 1 ~~~~~~~~~--~~~~~~~~~~~~~~~--~-~~~~~ev~irv~~~~i~~~d~~~~~g~~~~~~~~~~~g~e~~G--~V~~v 73 (329)
T cd08298 1 MKAMVLEKP--GPIEENPLRLTEVPV--P-EPGPGEVLIKVEACGVCRTDLHIVEGDLPPPKLPLIPGHEIVG--RVEAV 73 (329)
T ss_pred CeEEEEecC--CCCCCCCceEEeccC--C-CCCCCEEEEEEEEEeccHHHHHHHhCCCCCCCCCccccccccE--EEEEE
Confidence 589999888 765445567765444 4 4689999999999999999998887765444567899999666 99999
Q ss_pred cCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 87 DSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 87 G~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|++++++++||+|++ .|+|++|+.++.+.++++ |++++.. +++.+++
T Consensus 74 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~~~-~~~~~~~ 151 (329)
T cd08298 74 GPGVTRFSVGDRVGVPWLGSTCGECRYCRSGRENLCDNARFTGYTVDGGYAEYMVADERFAYPI-PEDYDDE-EAAPLLC 151 (329)
T ss_pred CCCCCCCcCCCEEEEeccCCCCCCChhHhCcChhhCCCccccccccCCceEEEEEecchhEEEC-CCCCCHH-HhhHhhh
Confidence 999999999999975 378999999999999999 9995444 3788999
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
++.|||+++ +.++++++++|||+| +|++|++++++++..|++|+++++++++.+.++ ++|++.+++++..
T Consensus 152 ~~~ta~~~~-~~~~~~~~~~vlV~g-~g~vg~~~~~la~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~------- 221 (329)
T cd08298 152 AGIIGYRAL-KLAGLKPGQRLGLYG-FGASAHLALQIARYQGAEVFAFTRSGEHQELAR-ELGADWAGDSDDL------- 221 (329)
T ss_pred hhHHHHHHH-HhhCCCCCCEEEEEC-CcHHHHHHHHHHHHCCCeEEEEcCChHHHHHHH-HhCCcEEeccCcc-------
Confidence 999999999 789999999999997 599999999999999999999999999999997 8999877776531
Q ss_pred HHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 216 KRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
..+++|+++++.+. ..+..++++++++|+++.+|..... ....... .+.++..+.+.... ..+.+
T Consensus 222 ---~~~~vD~vi~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~-~~~~~~~i~~~~~~-----~~~~~ 287 (329)
T cd08298 222 ---PPEPLDAAIIFAPVGALVPAALRAVKKGGRVVLAGIHMSD-----IPAFDYE-LLWGEKTIRSVANL-----TRQDG 287 (329)
T ss_pred ---CCCcccEEEEcCCcHHHHHHHHHHhhcCCEEEEEcCCCCC-----CCccchh-hhhCceEEEEecCC-----CHHHH
Confidence 12379999998665 7889999999999999988742210 1111222 23344454443222 25567
Q ss_pred HHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
+.+++++.++.+++. ..+|+++++.+|++.+.+++..||+|+
T Consensus 288 ~~~~~l~~~~~l~~~-~~~~~~~~~~~a~~~~~~~~~~~~~v~ 329 (329)
T cd08298 288 EEFLKLAAEIPIKPE-VETYPLEEANEALQDLKEGRIRGAAVL 329 (329)
T ss_pred HHHHHHHHcCCCCce-EEEEeHHHHHHHHHHHHcCCCcceeeC
Confidence 889999999988874 467899999999999999998899874
|
These alcohol dehydrogenases are related to the cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Cinnamyl alcohol dehydrogenases (CAD) reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short cha |
| >cd08234 threonine_DH_like L-threonine dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=5.3e-35 Score=262.87 Aligned_cols=299 Identities=25% Similarity=0.341 Sum_probs=237.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ + .+.+.+ .|.| ++++++|+||++++++|+.|+....|..+. .+|.++|+|++| +|+.+
T Consensus 1 ~~a~~~~~~--~-----~~~~~~--~~~~-~l~~~~v~v~v~~~~l~~~d~~~~~g~~~~-~~p~~~g~~~~G--~v~~v 67 (334)
T cd08234 1 MKALVYEGP--G-----ELEVEE--VPVP-EPGPDEVLIKVAACGICGTDLHIYEGEFGA-APPLVPGHEFAG--VVVAV 67 (334)
T ss_pred CeeEEecCC--C-----ceEEEe--ccCC-CCCCCeEEEEEEEEeEchhhhHHhcCCCCC-CCCcccccceEE--EEEEe
Confidence 588988876 4 256665 4445 579999999999999999999988876532 367899999665 99999
Q ss_pred cCCCCCCCCCCEEEe------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWG------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++++++||+|++ .|+|++|+.++.+.++++ |+++++.. ++.+ ..
T Consensus 68 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~~~~-aa~~-~~ 144 (334)
T cd08234 68 GSKVTGFKVGDRVAVDPNIYCGECFYCRRGRPNLCENLTAVGVTRNGGFAEYVVVPAKQVYKI-PDNLSFEE-AALA-EP 144 (334)
T ss_pred CCCCCCCCCCCEEEEcCCcCCCCCccccCcChhhCCCcceeccCCCCcceeEEEecHHHcEEC-cCCCCHHH-Hhhh-hH
Confidence 999999999999987 278999999999999999 99854442 4444 77
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+.++++++ ..++++++++|||+|+ |++|++++++|+..|++ |+++.+++++.+.++ ++|++.++++++. ++...
T Consensus 145 ~~~a~~~l-~~~~~~~g~~vlI~g~-g~vg~~~~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~- 219 (334)
T cd08234 145 LSCAVHGL-DLLGIKPGDSVLVFGA-GPIGLLLAQLLKLNGASRVTVAEPNEEKLELAK-KLGATETVDPSRE-DPEAQ- 219 (334)
T ss_pred HHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCeEEecCCCC-CHHHH-
Confidence 88999998 7789999999999974 99999999999999997 888998999989887 8999888888765 55554
Q ss_pred HHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 216 KRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
+...++++|+++||.|+ ..+...+++++++|+++.+|..... ..........+.+++++.+... ..+.+
T Consensus 220 ~~~~~~~vd~v~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~~----~~~~~~~~~~~~~~~~~~~~~~------~~~~~ 289 (334)
T cd08234 220 KEDNPYGFDVVIEATGVPKTLEQAIEYARRGGTVLVFGVYAPD----ARVSISPFEIFQKELTIIGSFI------NPYTF 289 (334)
T ss_pred HHhcCCCCcEEEECCCChHHHHHHHHHHhcCCEEEEEecCCCC----CCcccCHHHHHhCCcEEEEecc------CHHHH
Confidence 33333389999999986 7888999999999999999875431 0112223334446676665432 24568
Q ss_pred HHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 295 EMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
+++++++.++.+++. +..+++++++.++++.+.+ +..||+|+
T Consensus 290 ~~~~~~~~~~~l~~~~~~~~~~~~~~~~~a~~~~~~-~~~~k~vi 333 (334)
T cd08234 290 PRAIALLESGKIDVKGLVSHRLPLEEVPEALEGMRS-GGALKVVV 333 (334)
T ss_pred HHHHHHHHcCCCChhhhEEEEecHHHHHHHHHHHhc-CCceEEEe
Confidence 889999999988753 5567899999999999998 77889886
|
L-threonine dehydrogenase (TDH) catalyzes the zinc-dependent formation of 2-amino-3-ketobutyrate from L-threonine, via NAD(H)-dependent oxidation. THD is a member of the zinc-requiring, medium chain NAD(H)-dependent alcohol dehydrogenase family (MDR). MDRs have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. |
| >cd08264 Zn_ADH_like2 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.8e-35 Score=263.66 Aligned_cols=294 Identities=25% Similarity=0.327 Sum_probs=232.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||++++.++ + + +.+++++ .+.| ++++++|+||+.++++|++|+..+.+ .....+|.++|||++| +|+++
T Consensus 1 ~~~~~~~~~--~-~--~~~~~~~--~~~~-~~~~~ev~v~v~~~~i~~~d~~~~~~-~~~~~~~~~~g~e~~G--~v~~v 69 (325)
T cd08264 1 MKALVFEKS--G-I--ENLKVED--VKDP-KPGPGEVLIRVKMAGVNPVDYNVINA-VKVKPMPHIPGAEFAG--VVEEV 69 (325)
T ss_pred CeeEEeccC--C-C--CceEEEe--ccCC-CCCCCeEEEEEEEEEechHHHHHHhC-CCCCCCCeecccceeE--EEEEE
Confidence 578888766 5 3 3456655 4444 56999999999999999999887664 2222346789999776 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.+++.
T Consensus 70 G~~v~~~~~Gd~V~~~~~~~~~~c~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~ 147 (325)
T cd08264 70 GDHVKGVKKGDRVVVYNRVFDGTCDMCLSGNEMLCRNGGIIGVVSNGGYAEYIVVPEKNLFKI-PDSISDE-LAASLPVA 147 (325)
T ss_pred CCCCCCCCCCCEEEECCCcCCCCChhhcCCCccccCccceeeccCCCceeeEEEcCHHHceeC-CCCCCHH-Hhhhhhhh
Confidence 9999999999999863 78999999999999999 9985444 37788889
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
+.+||+++.. ++++++++|+|+|++|++|++++++|+..|++|+++++ .+.++ ++|+++++++++ ..+.++
T Consensus 148 ~~~a~~~l~~-~~~~~g~~vlI~g~~g~vg~~~~~~a~~~G~~v~~~~~----~~~~~-~~g~~~~~~~~~---~~~~l~ 218 (325)
T cd08264 148 ALTAYHALKT-AGLGPGETVVVFGASGNTGIFAVQLAKMMGAEVIAVSR----KDWLK-EFGADEVVDYDE---VEEKVK 218 (325)
T ss_pred hHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeH----HHHHH-HhCCCeeecchH---HHHHHH
Confidence 9999999955 88999999999999999999999999999999988873 36666 899988887653 355666
Q ss_pred HHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHH
Q 019332 217 RYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEM 296 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 296 (342)
+.+ +++|+++|+.|+..+..++++|+++|+++.+|..... ........++.++.++.+..... ++.+++
T Consensus 219 ~~~-~~~d~vl~~~g~~~~~~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 287 (325)
T cd08264 219 EIT-KMADVVINSLGSSFWDLSLSVLGRGGRLVTFGTLTGG-----EVKLDLSDLYSKQISIIGSTGGT-----RKELLE 287 (325)
T ss_pred HHh-CCCCEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----CCccCHHHHhhcCcEEEEccCCC-----HHHHHH
Confidence 666 6799999999998889999999999999999864221 12233445555666666654333 466778
Q ss_pred HHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceE
Q 019332 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQ 335 (342)
Q Consensus 297 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 335 (342)
+++++.... ..+...|+++++++|++.+.+++..+|+
T Consensus 288 ~~~l~~~~~--~~~~~~~~~~~~~~a~~~~~~~~~~~kv 324 (325)
T cd08264 288 LVKIAKDLK--VKVWKTFKLEEAKEALKELFSKERDGRI 324 (325)
T ss_pred HHHHHHcCC--ceeEEEEcHHHHHHHHHHHHcCCCcccc
Confidence 888885443 4466778999999999999988877775
|
This group resembles the zinc-dependent alcohol dehydrogenases of the medium chain dehydrogenase family. However, this subgroup does not contain the characteristic catalytic zinc site. Also, it contains an atypical structural zinc-binding pattern: DxxCxxCxxxxxxxC. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic fermentation. ADH is a member of the medium chain alcohol dehydrogenase family (MDR), which has a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The NAD(H)-binding region is comprised of 2 structurally similar halves, each of which contacts a mononucleotide. A GxGxxG motif after the first mononucleotide contact half allows the clo |
| >cd08273 MDR8 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.5e-35 Score=264.57 Aligned_cols=314 Identities=23% Similarity=0.255 Sum_probs=242.8
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~ 85 (342)
+|||.+.+. +.| .++++++.+. | .+.+++|+|++.++++|++|+..+.+..+. ..+|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~~~~~--~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~ 71 (331)
T cd08273 1 NREVVVTRR--GGP--EVLKVVEADL--P-EPAAGEVVVKVEASGVSFADVQMRRGLYPDQPPLPFTPGYDLVG--RVDA 71 (331)
T ss_pred CeeEEEccC--CCc--ccEEEeccCC--C-CCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceEE--EEEE
Confidence 478999988 766 4566665544 4 458899999999999999999888775422 2457789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
+|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.+||+++.+.+++.++++|+|+|++
T Consensus 72 vG~~v~~~~~Gd~V~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~a~~~~~~~~ta~~~l~~~~~~~~g~~vlI~g~~ 149 (331)
T cd08273 72 LGSGVTGFEVGDRVAALTRVGGNAEYINLDAKYLVPV-PEGVDAA-EAVCLVLNYVTAYQMLHRAAKVLTGQRVLIHGAS 149 (331)
T ss_pred eCCCCccCCCCCEEEEeCCCcceeeEEEechHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEECCC
Confidence 99999999999999996 89999999999999999 9985444 3778899999999999887889999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l 242 (342)
|++|++++++|+..|++|+++++ +++.+.++ ++|+.. ++++.. ++.+. +...+++|+++||+|+..+..+++++
T Consensus 150 g~ig~~~~~~a~~~g~~v~~~~~-~~~~~~~~-~~g~~~-~~~~~~-~~~~~--~~~~~~~d~vl~~~~~~~~~~~~~~l 223 (331)
T cd08273 150 GGVGQALLELALLAGAEVYGTAS-ERNHAALR-ELGATP-IDYRTK-DWLPA--MLTPGGVDVVFDGVGGESYEESYAAL 223 (331)
T ss_pred cHHHHHHHHHHHHcCCEEEEEeC-HHHHHHHH-HcCCeE-EcCCCc-chhhh--hccCCCceEEEECCchHHHHHHHHHh
Confidence 99999999999999999999997 88888887 899743 555544 44443 33334799999999997789999999
Q ss_pred hhCCEEEEEceeccccCCCCcc-cc---------chHHHHhcceeeecceecc--cccchHHHHHHHHHHHHcCCceeee
Q 019332 243 KIHGRIAVCGMISQYNLDRPEG-VH---------NLMYLVTKRVRMEGFLVRD--YYHLYPKFLEMIIPHIKEGKIVYVE 310 (342)
Q Consensus 243 ~~~G~~v~~g~~~~~~~~~~~~-~~---------~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~~~~~ 310 (342)
+++|+++.+|.....+...... .. .....+.+++++....... .++...+.++.+++++.++.+++.+
T Consensus 224 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~~~~~~~~~~~~l~~~~ 303 (331)
T cd08273 224 APGGTLVCYGGNSSLLQGRRSLAALGSLLARLAKLKLLPTGRRATFYYVWRDRAEDPKLFRQDLTELLDLLAKGKIRPKI 303 (331)
T ss_pred cCCCEEEEEccCCCCCCccccccchhhhhhhhhhhcceeccceeEEEeechhcccCHHHHHHHHHHHHHHHHCCCccCCc
Confidence 9999999998754321100000 00 0011122233332222110 1233457788999999999998877
Q ss_pred eeeeccccHHHHHHHHHcCCccceEEE
Q 019332 311 DMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 311 ~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
..++++++++++++.+.+++..||+|+
T Consensus 304 ~~~~~~~~~~~a~~~~~~~~~~gkvv~ 330 (331)
T cd08273 304 AKRLPLSEVAEAHRLLESGKVVGKIVL 330 (331)
T ss_pred ceEEcHHHHHHHHHHHHcCCCcceEEe
Confidence 778899999999999999888899886
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05285 sorbitol_DH Sorbitol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4.3e-35 Score=264.23 Aligned_cols=290 Identities=19% Similarity=0.215 Sum_probs=229.9
Q ss_pred ceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccC-CC--CccccCCCCCcccccEEEEEecCCCCCCCCCCEEE
Q 019332 24 DMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI-KG--SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVW 100 (342)
Q Consensus 24 ~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~ 100 (342)
.+++++ .|.| .+.+++|+||+.++++|+.|++.+.+. .+ ...+|.++|+|++| +|+++|++++++++||+|+
T Consensus 9 ~~~~~~--~~~~-~l~~~~vlV~v~~~~l~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd~V~ 83 (343)
T cd05285 9 DLRLEE--RPIP-EPGPGEVLVRVRAVGICGSDVHYYKHGRIGDFVVKEPMVLGHESAG--TVVAVGSGVTHLKVGDRVA 83 (343)
T ss_pred ceeEEE--CCCC-CCCCCeEEEEEEEeeEccccHHHHccCCCcccCCCCCcccCcceeE--EEEeeCCCCCCCCCCCEEE
Confidence 356655 4555 458999999999999999998765422 11 12356789999776 9999999999999999998
Q ss_pred e-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcC
Q 019332 101 G-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCS 149 (342)
Q Consensus 101 ~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~ 149 (342)
+ .|+|++|+.++.+.++++ |++++.. +++.+ .++++|++++ ..++
T Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~~~~~-~aa~~-~~~~~a~~~~-~~~~ 159 (343)
T cd05285 84 IEPGVPCRTCEFCKSGRYNLCPDMRFAATPPVDGTLCRYVNHPADFCHKL-PDNVSLE-EGALV-EPLSVGVHAC-RRAG 159 (343)
T ss_pred EccccCCCCChhHhCcCcccCcCccccccccCCCceeeeEEecHHHcEEC-cCCCCHH-Hhhhh-hHHHHHHHHH-HhcC
Confidence 5 378999999999999999 9994433 24444 6788999997 7789
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhH---HHHHHHHCCC-Ccc
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDL---NEALKRYFPE-GID 224 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~---~~~i~~~~~~-~~d 224 (342)
++++++|||+|+ |++|++++|+|+..|++ |+++.+++++.+.++ ++|++.++++++. ++ .+.+.+.+.+ ++|
T Consensus 160 ~~~g~~vlI~g~-g~vG~~a~~lak~~G~~~v~~~~~~~~~~~~~~-~~g~~~vi~~~~~-~~~~~~~~~~~~~~~~~~d 236 (343)
T cd05285 160 VRPGDTVLVFGA-GPIGLLTAAVAKAFGATKVVVTDIDPSRLEFAK-ELGATHTVNVRTE-DTPESAEKIAELLGGKGPD 236 (343)
T ss_pred CCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCcEEeccccc-cchhHHHHHHHHhCCCCCC
Confidence 999999999875 99999999999999997 899998999989998 8999999988775 53 7778887776 899
Q ss_pred EEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHc
Q 019332 225 IYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKE 303 (342)
Q Consensus 225 ~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (342)
++|||.|+. .+...+++++++|+++.+|..... ..........+++.+.+.... .+.++.+++++.+
T Consensus 237 ~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~l~~ 304 (343)
T cd05285 237 VVIECTGAESCIQTAIYATRPGGTVVLVGMGKPE------VTLPLSAASLREIDIRGVFRY------ANTYPTAIELLAS 304 (343)
T ss_pred EEEECCCCHHHHHHHHHHhhcCCEEEEEccCCCC------CccCHHHHhhCCcEEEEeccC------hHHHHHHHHHHHc
Confidence 999999984 889999999999999999864321 112223445556665554321 2567888999999
Q ss_pred CCce--eeeeeeeccccHHHHHHHHHcCC-ccceEEE
Q 019332 304 GKIV--YVEDMAEGLESAPATLIGLFSGR-NVGKQVV 337 (342)
Q Consensus 304 g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv 337 (342)
+.+. +.+..+++++++.+|++.+.+++ ..+|++|
T Consensus 305 ~~l~~~~~~~~~~~l~~~~~a~~~~~~~~~~~~k~~~ 341 (343)
T cd05285 305 GKVDVKPLITHRFPLEDAVEAFETAAKGKKGVIKVVI 341 (343)
T ss_pred CCCCchHhEEEEEeHHHHHHHHHHHHcCCCCeeEEEE
Confidence 9865 34566789999999999999885 4589987
|
Sorbitol and aldose reductase are NAD(+) binding proteins of the polyol pathway, which interconverts glucose and fructose. Sorbitol dehydrogenase is tetrameric and has a single catalytic zinc per subunit. Aldose reductase catalyzes the NADP(H)-dependent conversion of glucose to sorbital, and SDH uses NAD(H) in the conversion of sorbitol to fructose. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. The medium chain alcohol dehydrogenase family (MDR) have a NAD(P)(H)-binding domain in a Rossmann fold of a beta-alpha form. The N-terminal region typically has an all-beta catalytic domain. These proteins typically form dimers (typically higher plants, mammals) or tetramers (yeast, bacteria), and have 2 tightly bound zinc atoms per subunit. |
| >cd08268 MDR2 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=257.73 Aligned_cols=315 Identities=23% Similarity=0.297 Sum_probs=255.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
||++.+.+. +.+ +.+.+.+ .+.| ++++++++|++.++++|+.|+....+... ...+|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~ 71 (328)
T cd08268 1 MRAVRFHQF--GGP--EVLRIEE--LPVP-APGAGEVLIRVEAIGLNRADAMFRRGAYIEPPPLPARLGYEAAG--VVEA 71 (328)
T ss_pred CeEEEEecc--CCc--ceeEEee--cCCC-CCCCCeEEEEEEEEecChHHhheeccccCCCCCCCCCCCcceEE--EEEe
Confidence 478888876 554 3455544 4444 56899999999999999999988776542 23447789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec--------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 86 LDSENPEFKKGDLVWGM--------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~--------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+|++++++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.+||+++.....+.++++++
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vl 149 (328)
T cd08268 72 VGAGVTGFAVGDRVSVIPAADLGQYGTYAEYALVPAAAVVKL-PDGLSFV-EAAALWMQYLTAYGALVELAGLRPGDSVL 149 (328)
T ss_pred eCCCCCcCCCCCEEEeccccccCCCccceEEEEechHhcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEE
Confidence 99999999999999986 78999999999999999 9984333 37788999999999998788899999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLD 236 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 236 (342)
|+|++|++|++++++++..|++++.+++++++.+.++ ++|.+.+++++.. ++.+.+.+.+.+ ++|+++|+.|+....
T Consensus 150 i~g~~~~~g~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~ 227 (328)
T cd08268 150 ITAASSSVGLAAIQIANAAGATVIATTRTSEKRDALL-ALGAAHVIVTDEE-DLVAEVLRITGGKGVDVVFDPVGGPQFA 227 (328)
T ss_pred EecCccHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HcCCCEEEecCCc-cHHHHHHHHhCCCCceEEEECCchHhHH
Confidence 9999999999999999999999999999999989887 8998888888776 777778877766 899999999998888
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc---ccchHHHHHHHHHHHHcCCceeeeeee
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVYVEDMA 313 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~ 313 (342)
.++++++++|+++.+|..... .........+.+++++.+...... +......++.+.+++.++.+.+.....
T Consensus 228 ~~~~~l~~~g~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (328)
T cd08268 228 KLADALAPGGTLVVYGALSGE-----PTPFPLKAALKKSLTFRGYSLDEITLDPEARRRAIAFILDGLASGALKPVVDRV 302 (328)
T ss_pred HHHHhhccCCEEEEEEeCCCC-----CCCCchHHHhhcCCEEEEEecccccCCHHHHHHHHHHHHHHHHCCCCcCCcccE
Confidence 999999999999999864431 112233335777888777654332 233345667777788888888776677
Q ss_pred eccccHHHHHHHHHcCCccceEEEEe
Q 019332 314 EGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 314 ~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++++++.++++.+.+++..+|+++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~~~vv~~~ 328 (328)
T cd08268 303 FPFDDIVEAHRYLESGQQIGKIVVTP 328 (328)
T ss_pred EcHHHHHHHHHHHHcCCCCceEEEeC
Confidence 89999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR00692 tdh L-threonine 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=9.6e-35 Score=261.66 Aligned_cols=292 Identities=20% Similarity=0.246 Sum_probs=232.1
Q ss_pred eEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC---CCccccCCCCCcccccEEEEEecCCCCCCCCCCEEEe
Q 019332 25 MYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK---GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWG 101 (342)
Q Consensus 25 ~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~ 101 (342)
+++++ .|.| +++++||+||+.++++|+.|+..+.+.. ....+|.++|+|++| +|+++|++++++++||+|++
T Consensus 11 ~~l~~--~~~p-~~~~~ev~V~v~~~~~~~~d~~~~~~~~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd~V~~ 85 (340)
T TIGR00692 11 AELTE--VPVP-EPGPGEVLIKVLATSICGTDVHIYNWDEWAQSRIKPPQVVGHEVAG--EVVGIGPGVEGIKVGDYVSV 85 (340)
T ss_pred cEEEE--CCCC-CCCCCeEEEEEEEEEEcccCHHHHcCCCCCCCCCCCCcccccceEE--EEEEECCCCCcCCCCCEEEE
Confidence 56655 5555 4589999999999999999998765532 122346789999776 99999999999999999987
Q ss_pred ---------------------------c---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCC
Q 019332 102 ---------------------------M---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPK 151 (342)
Q Consensus 102 ---------------------------~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~ 151 (342)
+ |+|++|+.++.+.++++ |++++ ++.++++.++.+|++++ ...++
T Consensus 86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~l-p~~~~--~~~a~~~~~~~~a~~~~--~~~~~ 160 (340)
T TIGR00692 86 ETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGCFAEYAVVPAQNIWKN-PKSIP--PEYATIQEPLGNAVHTV--LAGPI 160 (340)
T ss_pred CCcCCCCCChhhhCcChhhCcCcceEeecCCCcceeEEEeehHHcEEC-cCCCC--hHhhhhcchHHHHHHHH--HccCC
Confidence 2 78999999999999999 99844 34556778889999887 34578
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~ 229 (342)
++++|+|.| +|++|++++|+|+..|++ |+++.+++++.+.++ ++|++.+++++.. ++.+.+.+.+++ ++|++|||
T Consensus 161 ~g~~vlI~~-~g~vg~~a~~la~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~v~~~~~-~~~~~l~~~~~~~~~d~vld~ 237 (340)
T TIGR00692 161 SGKSVLVTG-AGPIGLMAIAVAKASGAYPVIVSDPNEYRLELAK-KMGATYVVNPFKE-DVVKEVADLTDGEGVDVFLEM 237 (340)
T ss_pred CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCcEEEccccc-CHHHHHHHhcCCCCCCEEEEC
Confidence 999999977 599999999999999996 888888888888888 8999888888876 888888888776 89999999
Q ss_pred CCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCce-
Q 019332 230 VGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV- 307 (342)
Q Consensus 230 ~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~- 307 (342)
+|+ ..+...+++|+++|+++.+|..... . . ......++.+++.+.+.. .....+.+.++++++.++.++
T Consensus 238 ~g~~~~~~~~~~~l~~~g~~v~~g~~~~~-~---~-~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~l~~~~l~~ 308 (340)
T TIGR00692 238 SGAPKALEQGLQAVTPGGRVSLLGLPPGK-V---T-IDFTNKVIFKGLTIYGIT----GRHMFETWYTVSRLIQSGKLDL 308 (340)
T ss_pred CCCHHHHHHHHHhhcCCCEEEEEccCCCC-c---c-cchhhhhhhcceEEEEEe----cCCchhhHHHHHHHHHcCCCCh
Confidence 886 6788999999999999999875321 1 1 111223455566665433 122345678899999999987
Q ss_pred -eeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 308 -YVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 308 -~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+.+...++++++.++++.+.+++. ||+|+++
T Consensus 309 ~~~~~~~~~l~~~~~a~~~~~~~~~-gkvvv~~ 340 (340)
T TIGR00692 309 DPIITHKFKFDKFEKGFELMRSGQT-GKVILSL 340 (340)
T ss_pred HHheeeeeeHHHHHHHHHHHhcCCC-ceEEEeC
Confidence 345677899999999999998874 9999864
|
E. coli His-90 modulates substrate specificity and is believed part of the active site. |
| >cd08265 Zn_ADH3 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.1e-34 Score=265.18 Aligned_cols=293 Identities=20% Similarity=0.201 Sum_probs=231.5
Q ss_pred eEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC------C-CccccCCCCCcccccEEEEEecCCCCCCCCCC
Q 019332 25 MYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK------G-SYVESFKPGMPISGYGVAKVLDSENPEFKKGD 97 (342)
Q Consensus 25 ~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~------~-~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd 97 (342)
+++++ +|.| .+++++|+||+.++++|++|++.+.+.. + ...+|.++|||++| +|+++|++++.+++||
T Consensus 39 ~~~~~--~~~p-~~~~~ev~V~v~a~gi~~~D~~~~~~~~~~~~~~~~~~~~~~~~g~e~~G--~V~~vG~~v~~~~~Gd 113 (384)
T cd08265 39 LRVED--VPVP-NLKPDEILIRVKACGICGSDIHLYETDKDGYILYPGLTEFPVVIGHEFSG--VVEKTGKNVKNFEKGD 113 (384)
T ss_pred EEEEE--CCCC-CCCCCEEEEEEEEEEEcHhHHHHHcCCCCcccccCcccCCCcccccceEE--EEEEECCCCCCCCCCC
Confidence 56655 5555 4689999999999999999988776321 1 13457899999776 9999999999999999
Q ss_pred EEEe------------------------------ccccceeEeecCCcceeecCCCCC-----ccchhhccCCchhhHHH
Q 019332 98 LVWG------------------------------MTGWEEYSLVTAPQLFKIQHTDVP-----LSYYTGILGMPGMTAYA 142 (342)
Q Consensus 98 ~V~~------------------------------~g~~~~~~~v~~~~~~~i~p~~~~-----~~~~~a~l~~~~~ta~~ 142 (342)
+|++ .|+|++|+.++.+.++++ |++++ +..++++++.++++||+
T Consensus 114 ~V~~~~~~~~~~~~~c~~~~~~~~~~~~~~g~~~~g~~~~~v~v~~~~~~~l-P~~~~~~~~~~~~~~a~~~~~~~ta~~ 192 (384)
T cd08265 114 PVTAEEMMWCGMCRACRSGSPNHCKNLKELGFSADGAFAEYIAVNARYAWEI-NELREIYSEDKAFEAGALVEPTSVAYN 192 (384)
T ss_pred EEEECCCCCCCCChhhhCcCcccCCCcceeeecCCCcceeeEEechHHeEEC-CccccccccCCCHHHhhhhhHHHHHHH
Confidence 9985 378999999999999999 88531 33346677889999999
Q ss_pred hhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCC---chhHHHHHHH
Q 019332 143 GFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKE---EPDLNEALKR 217 (342)
Q Consensus 143 al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~---~~~~~~~i~~ 217 (342)
++... +++++|++|||+| +|++|++++++|+..|+ +|+++++++++.+.++ ++|+++++++++ . ++.+.+++
T Consensus 193 al~~~~~~~~~g~~VlV~g-~g~vG~~ai~lA~~~G~~~vi~~~~~~~~~~~~~-~~g~~~~v~~~~~~~~-~~~~~v~~ 269 (384)
T cd08265 193 GLFIRGGGFRPGAYVVVYG-AGPIGLAAIALAKAAGASKVIAFEISEERRNLAK-EMGADYVFNPTKMRDC-LSGEKVME 269 (384)
T ss_pred HHHhhcCCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcccccccc-cHHHHHHH
Confidence 99666 6899999999996 59999999999999999 8999998888888888 899988888763 2 56778888
Q ss_pred HCCC-CccEEEeCCCh--hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 218 YFPE-GIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 218 ~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
.+.+ ++|+++||.|+ ..+..++++|+++|+++.+|..... .......+..+..++.+.... .....+
T Consensus 270 ~~~g~gvDvvld~~g~~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~l~~~~~~----~~~~~~ 339 (384)
T cd08265 270 VTKGWGADIQVEAAGAPPATIPQMEKSIAINGKIVYIGRAATT------VPLHLEVLQVRRAQIVGAQGH----SGHGIF 339 (384)
T ss_pred hcCCCCCCEEEECCCCcHHHHHHHHHHHHcCCEEEEECCCCCC------CcccHHHHhhCceEEEEeecc----CCcchH
Confidence 8877 89999999996 3678999999999999999864321 111223344455565554321 123468
Q ss_pred HHHHHHHHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 295 EMIIPHIKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
.++++++.++.+++. +...|+++++.+|++.+.++ ..||+|+
T Consensus 340 ~~~~~ll~~g~l~~~~~~~~~~~~~~~~~a~~~~~~~-~~~kvvv 383 (384)
T cd08265 340 PSVIKLMASGKIDMTKIITARFPLEGIMEAIKAASER-TDGKITI 383 (384)
T ss_pred HHHHHHHHcCCCChHHheEEEeeHHHHHHHHHHHhcC-CCceEEe
Confidence 889999999999864 55678999999999997665 5788886
|
This group resembles the zinc-dependent alcohol dehydrogenase and has the catalytic and structural zinc-binding sites characteristic of this group. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanedi |
| >cd08271 MDR5 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3e-34 Score=256.82 Aligned_cols=310 Identities=22% Similarity=0.298 Sum_probs=247.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ +. .+++.+++ +|.| ++.+++|+||+.++++|++|+..+.+......+|.++|||++| +|+.+
T Consensus 1 ~~a~~~~~~--~~--~~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~g~e~~G--~v~~~ 71 (325)
T cd08271 1 MKAWVLPKP--GA--ALQLTLEE--IEIP-GPGAGEVLVKVHAAGLNPVDWKVIAWGPPAWSYPHVPGVDGAG--VVVAV 71 (325)
T ss_pred CeeEEEccC--CC--cceeEEec--cCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCcccccceEE--EEEEe
Confidence 589999988 43 12456655 4545 5689999999999999999998877754333446789999776 99999
Q ss_pred cCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 87 DSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
|++++.+++||+|+++ |+|++|+.++.+.++++ |++++.. +++.+++++.+|++++.+.+++++|++|+|+|
T Consensus 72 G~~~~~~~~Gd~V~~~~~~~~~~~~~s~~~~~~~~~~~i-p~~~~~~-~~a~~~~~~~~a~~~~~~~~~~~~g~~vlI~g 149 (325)
T cd08271 72 GAKVTGWKVGDRVAYHASLARGGSFAEYTVVDARAVLPL-PDSLSFE-EAAALPCAGLTAYQALFKKLRIEAGRTILITG 149 (325)
T ss_pred CCCCCcCCCCCEEEeccCCCCCccceeEEEeCHHHeEEC-CCCCCHH-HHHhhhhhHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 9999999999999986 68999999999999999 9984444 37788999999999998888999999999999
Q ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHH
Q 019332 161 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 161 a~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~ 239 (342)
+++++|++++++++..|++|+++. ++++.+.+. ++|++.+++.... ++.+.+++.+.+ ++|+++||.++......+
T Consensus 150 ~~~~ig~~~~~~a~~~g~~v~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~ 226 (325)
T cd08271 150 GAGGVGSFAVQLAKRAGLRVITTC-SKRNFEYVK-SLGADHVIDYNDE-DVCERIKEITGGRGVDAVLDTVGGETAAALA 226 (325)
T ss_pred CccHHHHHHHHHHHHcCCEEEEEE-cHHHHHHHH-HcCCcEEecCCCc-cHHHHHHHHcCCCCCcEEEECCCcHhHHHHH
Confidence 989999999999999999999887 667778887 8999888888776 777888888776 899999999997777899
Q ss_pred HhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc----c----cchHHHHHHHHHHHHcCCceeeee
Q 019332 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY----Y----HLYPKFLEMIIPHIKEGKIVYVED 311 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~----~~~~~~~~~~~~~~~~g~~~~~~~ 311 (342)
++++++|+++.++..... . ....+.+++.+....+... + +...+.+.++++++.++.+.+...
T Consensus 227 ~~l~~~G~~v~~~~~~~~-------~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~ 297 (325)
T cd08271 227 PTLAFNGHLVCIQGRPDA-------S--PDPPFTRALSVHEVALGAAHDHGDPAAWQDLRYAGEELLELLAAGKLEPLVI 297 (325)
T ss_pred HhhccCCEEEEEcCCCCC-------c--chhHHhhcceEEEEEecccccccchhhHHHHHHHHHHHHHHHHCCCeeeccc
Confidence 999999999988754321 0 1111223333332222111 1 234456788999999999987766
Q ss_pred eeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 312 MAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 312 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
..++++++.++++.+.++...+|+++++
T Consensus 298 ~~~~~~~~~~a~~~~~~~~~~~kiv~~~ 325 (325)
T cd08271 298 EVLPFEQLPEALRALKDRHTRGKIVVTI 325 (325)
T ss_pred eEEcHHHHHHHHHHHHcCCccceEEEEC
Confidence 7789999999999999888889999863
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd08232 idonate-5-DH L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.7e-34 Score=260.03 Aligned_cols=289 Identities=20% Similarity=0.223 Sum_probs=227.1
Q ss_pred CceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccc-cCCC--CccccCCCCCcccccEEEEEecCCCCCCCCCCEE
Q 019332 23 TDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMT-NIKG--SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLV 99 (342)
Q Consensus 23 ~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~-~~~~--~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V 99 (342)
+.+++++.++| ++++++|+||+.++++|++|+..+. +..+ ...+|.++|+|++| +|+++|+++++|++||+|
T Consensus 7 ~~~~~~~~~~p---~l~~~~v~I~v~~~~i~~~d~~~~~~~~~~~~~~~~p~~~g~e~~G--~v~~vG~~v~~~~~Gd~V 81 (339)
T cd08232 7 GDLRVEERPAP---EPGPGEVRVRVAAGGICGSDLHYYQHGGFGTVRLREPMVLGHEVSG--VVEAVGPGVTGLAPGQRV 81 (339)
T ss_pred CceEEEEcCCC---CCCCCEEEEEEEEEEECcccHHHHcCCCCCcccccCCeecCccceE--EEEeeCCCCCcCCCCCEE
Confidence 34567665454 5689999999999999999987663 3221 12356789999776 999999999999999999
Q ss_pred Ee-----------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhh
Q 019332 100 WG-----------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGF 144 (342)
Q Consensus 100 ~~-----------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al 144 (342)
++ .|+|++|+.++.+.++++ |++ ++.+.++++.++++||+++
T Consensus 82 ~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~g~~~~~v~v~~~~~~~i-P~~--~~~~~aa~~~~~~~a~~~l 158 (339)
T cd08232 82 AVNPSRPCGTCDYCRAGRPNLCLNMRFLGSAMRFPHVQGGFREYLVVDASQCVPL-PDG--LSLRRAALAEPLAVALHAV 158 (339)
T ss_pred EEccCCcCCCChHHhCcCcccCccccceeeccccCCCCCceeeEEEechHHeEEC-cCC--CCHHHhhhcchHHHHHHHH
Confidence 86 278999999999999999 998 4443334467889999998
Q ss_pred hhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCC--C
Q 019332 145 YEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 145 ~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~--~ 221 (342)
.....+ ++++|||+| +|++|++++|+|+..|+ +|+++++++++.++++ ++|++.++++++. + +++... +
T Consensus 159 ~~~~~~-~~~~VLI~g-~g~vG~~~~~lak~~G~~~v~~~~~s~~~~~~~~-~~g~~~vi~~~~~-~----~~~~~~~~~ 230 (339)
T cd08232 159 NRAGDL-AGKRVLVTG-AGPIGALVVAAARRAGAAEIVATDLADAPLAVAR-AMGADETVNLARD-P----LAAYAADKG 230 (339)
T ss_pred HhcCCC-CCCEEEEEC-CCHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HcCCCEEEcCCch-h----hhhhhccCC
Confidence 766666 999999987 59999999999999999 8999998888888887 8999889988765 4 222222 2
Q ss_pred CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHH
Q 019332 222 GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300 (342)
Q Consensus 222 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (342)
++|+++||.|+ ..+..++++|+++|+++.+|..... ........+.+++++.+... ..+.+++++++
T Consensus 231 ~vd~vld~~g~~~~~~~~~~~L~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~ 298 (339)
T cd08232 231 DFDVVFEASGAPAALASALRVVRPGGTVVQVGMLGGP------VPLPLNALVAKELDLRGSFR------FDDEFAEAVRL 298 (339)
T ss_pred CccEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCC------ccCcHHHHhhcceEEEEEec------CHHHHHHHHHH
Confidence 69999999996 6788999999999999999864311 11123334556777665432 24567889999
Q ss_pred HHcCCceee--eeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 301 IKEGKIVYV--EDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 301 ~~~g~~~~~--~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+.++.+++. +..+++++++++|++.+.+++..||+|+++
T Consensus 299 ~~~~~i~~~~~~~~~~~~~~~~~a~~~~~~~~~~gkvvv~~ 339 (339)
T cd08232 299 LAAGRIDVRPLITAVFPLEEAAEAFALAADRTRSVKVQLSF 339 (339)
T ss_pred HHcCCCCchhheeEEecHHHHHHHHHHHHhCCCceeEEEeC
Confidence 999988643 566789999999999999888889999864
|
L-idonate 5-dehydrogenase (L-ido 5-DH ) catalyzes the conversion of L-lodonate to 5-ketogluconate in the metabolism of L-Idonate to 6-P-gluconate. In E. coli, this GntII pathway is a subsidiary pathway to the canonical GntI system, which also phosphorylates and transports gluconate. L-ido 5-DH is found in an operon with a regulator indR, transporter idnT, 5-keto-D-gluconate 5-reductase, and Gnt kinase. L-ido 5-DH is a zinc-dependent alcohol dehydrogenase-like protein. The alcohol dehydrogenase ADH-like family of proteins is a diverse group of proteins related to the first identified member, class I mammalian ADH. This group is also called the medium chain dehydrogenases/reductase family (MDR) which displays a broad range of activities and are distinguished from the smaller short chain dehydrogenases(~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domai |
| >cd08272 MDR6 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-34 Score=257.71 Aligned_cols=309 Identities=24% Similarity=0.333 Sum_probs=249.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ +.+ +.+++++ .+.| ++.+++|+|++.++++|++|+....+... ....|.++|||++| +|+.
T Consensus 1 ~~a~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~ 71 (326)
T cd08272 1 MKALVLESF--GGP--EVFELRE--VPRP-QPGPGQVLVRVHASGVNPLDTKIRRGGAAARPPLPAILGCDVAG--VVEA 71 (326)
T ss_pred CeEEEEccC--CCc--hheEEee--cCCC-CCCCCeEEEEEEEEecCHHHHHHhCCCCCCCCCCCcccccceeE--EEEE
Confidence 589999887 666 3456655 4444 56899999999999999999988776432 12346789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec--------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 86 LDSENPEFKKGDLVWGM--------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~--------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+|+++..+++||+|+++ |+|++|+.++.+.++++ |++++.. .++.++..+.+||+++.+..+++++++++
T Consensus 72 ~G~~~~~~~~Gd~V~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~l~~~~~~~~~~~vl 149 (326)
T cd08272 72 VGEGVTRFRVGDEVYGCAGGLGGLQGSLAEYAVVDARLLALK-PANLSMR-EAAALPLVGITAWEGLVDRAAVQAGQTVL 149 (326)
T ss_pred eCCCCCCCCCCCEEEEccCCcCCCCCceeEEEEecHHHcccC-CCCCCHH-HHHHhHHHHHHHHHHHHHhcCCCCCCEEE
Confidence 99999999999999985 68999999999999999 9984443 37778889999999988889999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLD 236 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 236 (342)
|+|++|++|++++++++..|++|++++++ ++.+.++ ++|.+.+++... .+.+.+++.+.+ ++|+++||.|+....
T Consensus 150 i~g~~~~~g~~~~~~a~~~g~~v~~~~~~-~~~~~~~-~~g~~~~~~~~~--~~~~~~~~~~~~~~~d~v~~~~~~~~~~ 225 (326)
T cd08272 150 IHGGAGGVGHVAVQLAKAAGARVYATASS-EKAAFAR-SLGADPIIYYRE--TVVEYVAEHTGGRGFDVVFDTVGGETLD 225 (326)
T ss_pred EEcCCCcHHHHHHHHHHHcCCEEEEEech-HHHHHHH-HcCCCEEEecch--hHHHHHHHhcCCCCCcEEEECCChHHHH
Confidence 99999999999999999999999999988 8888887 899988887755 366778888776 899999999998888
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc--c----ccchHHHHHHHHHHHHcCCceeee
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD--Y----YHLYPKFLEMIIPHIKEGKIVYVE 310 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~~~~~~g~~~~~~ 310 (342)
..+++++++|+++.++.... ........+++++.+..... . ++...+.+..+++++.++.+.+.+
T Consensus 226 ~~~~~l~~~g~~v~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~l~~~~ 296 (326)
T cd08272 226 ASFEAVALYGRVVSILGGAT---------HDLAPLSFRNATYSGVFTLLPLLTGEGRAHHGEILREAARLVERGQLRPLL 296 (326)
T ss_pred HHHHHhccCCEEEEEecCCc---------cchhhHhhhcceEEEEEcccccccccchhhHHHHHHHHHHHHHCCCccccc
Confidence 89999999999999876421 01111225666666554322 1 223456788899999999988765
Q ss_pred e-eeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 311 D-MAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 311 ~-~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
. ..++++++.++++.+.+++..+|+++++
T Consensus 297 ~~~~~~~~~~~~~~~~~~~~~~~~~vv~~~ 326 (326)
T cd08272 297 DPRTFPLEEAAAAHARLESGSARGKIVIDV 326 (326)
T ss_pred ccceecHHHHHHHHHHHHcCCcccEEEEEC
Confidence 4 7789999999999999888889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >TIGR02824 quinone_pig3 putative NAD(P)H quinone oxidoreductase, PIG3 family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.1e-34 Score=256.49 Aligned_cols=315 Identities=25% Similarity=0.333 Sum_probs=255.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~ 85 (342)
|+|+.+... +.+ ..+.+.+ .+.| ++++++++||+.++++|+.|+....+.... ..+|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~~--~~~~-~l~~~~v~i~v~~~~~~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~ 71 (325)
T TIGR02824 1 MKAIEITEP--GGP--EVLVLVE--VPLP-VPKAGEVLIRVAAAGVNRPDLLQRAGKYPPPPGASDILGLEVAG--EVVA 71 (325)
T ss_pred CceEEEccC--CCc--ccceEEe--CCCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCCccceeEE--EEEE
Confidence 478887766 555 3455544 4434 568999999999999999998877664421 2346789999776 9999
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
+|+++.++++||+|+++ |+|++|+.++.+.++++ |++++.. ++++++.++.+|++++.+...++++++++|+|++
T Consensus 72 vg~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~ta~~~~~~~~~~~~~~~vlv~g~~ 149 (325)
T TIGR02824 72 VGEGVSRWKVGDRVCALVAGGGYAEYVAVPAGQVLPV-PEGLSLV-EAAALPETFFTVWSNLFQRGGLKAGETVLIHGGA 149 (325)
T ss_pred eCCCCCCCCCCCEEEEccCCCcceeEEEecHHHcEeC-CCCCCHH-HHHhhhHHHHHHHHHHHHhcCCCCCCEEEEEcCc
Confidence 99999999999999997 78999999999999999 9984433 3778899999999998788899999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++++++..|++|+++.+++++.+.++ ++|++.+++.... ++...++....+ ++|+++||.|+..+..++++
T Consensus 150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~ 227 (325)
T TIGR02824 150 SGIGTTAIQLAKAFGARVFTTAGSDEKCAACE-ALGADIAINYREE-DFVEVVKAETGGKGVDVILDIVGGSYLNRNIKA 227 (325)
T ss_pred chHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCch-hHHHHHHHHcCCCCeEEEEECCchHHHHHHHHh
Confidence 99999999999999999999999999888887 8998888887766 778888887766 89999999999888899999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
++++|+++.+|...... . ......++.+++++.+...... ++.....+.++++++.++.+.+.....+++
T Consensus 228 l~~~g~~v~~g~~~~~~----~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 302 (325)
T TIGR02824 228 LALDGRIVQIGFQGGRK----A-ELDLGPLLAKRLTITGSTLRARPVAEKAAIAAELREHVWPLLASGRVRPVIDKVFPL 302 (325)
T ss_pred hccCcEEEEEecCCCCc----C-CCChHHHHhcCCEEEEEehhhcchhhhHHHHHHHHHHHHHHHHCCcccCccccEEeH
Confidence 99999999998744321 1 2233444578888887765442 122345567788899999988777777899
Q ss_pred ccHHHHHHHHHcCCccceEEEEe
Q 019332 317 ESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++.++++.+.++...||+++++
T Consensus 303 ~~~~~~~~~~~~~~~~~~~v~~~ 325 (325)
T TIGR02824 303 EDAAQAHALMESGDHIGKIVLTV 325 (325)
T ss_pred HHHHHHHHHHHhCCCcceEEEeC
Confidence 99999999999888889999863
|
Members of this family are putative quinone oxidoreductases that belong to the broader superfamily (modeled by Pfam pfam00107) of zinc-dependent alcohol (of medium chain length) dehydrogenases and quinone oxiooreductases. The alignment shows no motif of conserved Cys residues as are found in zinc-binding members of the superfamily, and members are likely to be quinone oxidoreductases instead. A member of this family in Homo sapiens, PIG3, is induced by p53 but is otherwise uncharacterized. |
| >cd08251 polyketide_synthase polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=1e-34 Score=257.08 Aligned_cols=289 Identities=20% Similarity=0.288 Sum_probs=236.6
Q ss_pred CCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec-----cccceeEe
Q 019332 37 PKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM-----TGWEEYSL 110 (342)
Q Consensus 37 ~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~-----g~~~~~~~ 110 (342)
++.+++|+||+.++++|+.|+..+.+.++ ...+|.++|+|++| +|+++|++++++++||+|+++ |+|++|+.
T Consensus 4 ~~~~~~v~v~v~~~~i~~~d~~~~~~~~~~~~~~~~~~g~e~~G--~v~~~G~~v~~~~~Gd~V~~~~~~~~g~~~~~~~ 81 (303)
T cd08251 4 PPGPGEVRIQVRAFSLNFGDLLCVRGLYPTMPPYPFTPGFEASG--VVRAVGPHVTRLAVGDEVIAGTGESMGGHATLVT 81 (303)
T ss_pred CCCCCEEEEEEEEeecChHHHHHHCCCCCCCCCCCCCcCceeeE--EEEEECCCCCCCCCCCEEEEecCCCCcceeeEEE
Confidence 46899999999999999999988877543 22457789999666 999999999999999999986 78999999
Q ss_pred ecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH
Q 019332 111 VTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI 190 (342)
Q Consensus 111 v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~ 190 (342)
++.+.++++ |++++.. +++.++..+++||+++ +..+++++++|+|++++|++|++++|+++..|++|+++++++++.
T Consensus 82 ~~~~~~~~~-p~~~~~~-~aa~~~~~~~ta~~~l-~~~~~~~g~~vli~~~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~ 158 (303)
T cd08251 82 VPEDQVVRK-PASLSFE-EACALPVVFLTVIDAF-ARAGLAKGEHILIQTATGGTGLMAVQLARLKGAEIYATASSDDKL 158 (303)
T ss_pred ccHHHeEEC-CCCCCHH-HHHHhHHHHHHHHHHH-HhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEcCCHHHH
Confidence 999999999 9984444 3778889999999998 468999999999999999999999999999999999999999999
Q ss_pred HHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchH
Q 019332 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
+.++ ++|++.++++... ++.+.+.+.+++ ++|+++|++++......+++++++|+++.+|...... ..... .
T Consensus 159 ~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~~~~~~~~~~~~l~~~g~~v~~~~~~~~~----~~~~~-~ 231 (303)
T cd08251 159 EYLK-QLGVPHVINYVEE-DFEEEIMRLTGGRGVDVVINTLSGEAIQKGLNCLAPGGRYVEIAMTALKS----APSVD-L 231 (303)
T ss_pred HHHH-HcCCCEEEeCCCc-cHHHHHHHHcCCCCceEEEECCcHHHHHHHHHHhccCcEEEEEeccCCCc----cCccC-h
Confidence 9997 8999999998876 888888888877 8999999999888889999999999999987643210 00111 1
Q ss_pred HHHhcceeeecceeccc----ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 270 YLVTKRVRMEGFLVRDY----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 270 ~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
..+.+++.+....+... ++...+.+.++++++.++.+++.....++++++.++++.+.+++..||+++
T Consensus 232 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iv~ 303 (303)
T cd08251 232 SVLSNNQSFHSVDLRKLLLLDPEFIADYQAEMVSLVEEGELRPTVSRIFPFDDIGEAYRYLSDRENIGKVVV 303 (303)
T ss_pred hHhhcCceEEEEehHHhhhhCHHHHHHHHHHHHHHHHCCCccCCCceEEcHHHHHHHHHHHHhCCCcceEeC
Confidence 22333333333222111 233456788899999999998777777899999999999999888888874
|
Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde a |
| >PLN02702 L-idonate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=4e-34 Score=259.91 Aligned_cols=290 Identities=18% Similarity=0.209 Sum_probs=225.6
Q ss_pred eEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-C--CccccCCCCCcccccEEEEEecCCCCCCCCCCEEEe
Q 019332 25 MYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-G--SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWG 101 (342)
Q Consensus 25 ~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-~--~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~ 101 (342)
+++++ .|.| ++++++|+||+.++++|++|++.+.+.. + ...+|.++|||++| +|+++|+++++|++||+|++
T Consensus 29 l~~~~--~~~p-~~~~~ev~Ikv~~~~i~~~d~~~~~g~~~~~~~~~~p~~~G~e~~G--~V~~vG~~v~~~~~Gd~V~~ 103 (364)
T PLN02702 29 LKIQP--FKLP-PLGPHDVRVRMKAVGICGSDVHYLKTMRCADFVVKEPMVIGHECAG--IIEEVGSEVKHLVVGDRVAL 103 (364)
T ss_pred eEEEe--ccCC-CCCCCeEEEEEEEEEEchhhhHHHcCCCCccccCCCCcccccceeE--EEEEECCCCCCCCCCCEEEE
Confidence 45654 5555 4589999999999999999998876532 1 12357789999776 99999999999999999986
Q ss_pred -------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCC
Q 019332 102 -------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP 150 (342)
Q Consensus 102 -------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~ 150 (342)
.|+|++|+.++.+.++++ |++ ++++.+++..++.++++++ ...++
T Consensus 104 ~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~g~~~~y~~v~~~~~~~~-P~~--l~~~~aa~~~~~~~a~~~~-~~~~~ 179 (364)
T PLN02702 104 EPGISCWRCNLCKEGRYNLCPEMKFFATPPVHGSLANQVVHPADLCFKL-PEN--VSLEEGAMCEPLSVGVHAC-RRANI 179 (364)
T ss_pred cCCCCCCCCcchhCcCcccCCCccccCCCCCCCcccceEEcchHHeEEC-CCC--CCHHHHhhhhHHHHHHHHH-HhcCC
Confidence 278999999999999999 998 4443333334566688887 67889
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecC--CchhHHHHHHHH---CCCCcc
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYK--EEPDLNEALKRY---FPEGID 224 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~--~~~~~~~~i~~~---~~~~~d 224 (342)
.++++|+|+| +|++|++++++|+..|+ .|+++.+++++.+.++ ++|++.++++. +. ++.+.+.+. +++++|
T Consensus 180 ~~g~~vlI~g-~g~vG~~~~~~a~~~G~~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~d 256 (364)
T PLN02702 180 GPETNVLVMG-AGPIGLVTMLAARAFGAPRIVIVDVDDERLSVAK-QLGADEIVLVSTNIE-DVESEVEEIQKAMGGGID 256 (364)
T ss_pred CCCCEEEEEC-CCHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEecCcccc-cHHHHHHHHhhhcCCCCC
Confidence 9999999997 59999999999999999 4777777888888888 89998877653 33 566666654 233799
Q ss_pred EEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHc
Q 019332 225 IYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKE 303 (342)
Q Consensus 225 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 303 (342)
++|||+|+ ..+..++++++++|+++.+|..... ..........+++++.++... ...++.+++++.+
T Consensus 257 ~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~~~~~~------~~~~~~~~~~~~~ 324 (364)
T PLN02702 257 VSFDCVGFNKTMSTALEATRAGGKVCLVGMGHNE------MTVPLTPAAAREVDVVGVFRY------RNTWPLCLEFLRS 324 (364)
T ss_pred EEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------CcccHHHHHhCccEEEEeccC------hHHHHHHHHHHHc
Confidence 99999995 7889999999999999999864321 122344566677777765432 2457788999999
Q ss_pred CCce--eeeeeeec--cccHHHHHHHHHcCCccceEEEE
Q 019332 304 GKIV--YVEDMAEG--LESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 304 g~~~--~~~~~~~~--l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
+.+. +.+..+|+ ++++++|++.+.+++..+|+|+.
T Consensus 325 ~~l~~~~~~~~~~~l~~~~~~~a~~~~~~~~~~~kvv~~ 363 (364)
T PLN02702 325 GKIDVKPLITHRFGFSQKEVEEAFETSARGGNAIKVMFN 363 (364)
T ss_pred CCCCchHheEEEeccChHHHHHHHHHHhcCCCceEEEEe
Confidence 9885 33556654 48999999999988888999985
|
|
| >cd08242 MDR_like Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-34 Score=258.00 Aligned_cols=283 Identities=16% Similarity=0.151 Sum_probs=222.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ + .+++++.+. | ++++++|+||+.++++|++|...+.|.. ..|.++|||++| +|+++
T Consensus 1 ~~a~~~~~~--~-----~~~~~~~~~--p-~~~~~~vlV~v~a~~i~~~d~~~~~g~~---~~~~~~G~e~~G--~Vv~~ 65 (319)
T cd08242 1 MKALVLDGG--L-----DLRVEDLPK--P-EPPPGEALVRVLLAGICNTDLEIYKGYY---PFPGVPGHEFVG--IVEEG 65 (319)
T ss_pred CeeEEEeCC--C-----cEEEEECCC--C-CCCCCeEEEEEEEEEEccccHHHHcCCC---CCCCccCceEEE--EEEEe
Confidence 488999765 3 356766544 4 5689999999999999999998887753 257889999776 99999
Q ss_pred cCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 87 DSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 87 G~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|++ +++||+|.+ .|+|++|+.++.+.++++ |++ ++.+.++...
T Consensus 66 G~~---~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-P~~--~~~~~aa~~~ 139 (319)
T cd08242 66 PEA---ELVGKRVVGEINIACGRCEYCRRGLYTHCPNRTVLGIVDRDGAFAEYLTLPLENLHVV-PDL--VPDEQAVFAE 139 (319)
T ss_pred CCC---CCCCCeEEECCCcCCCCChhhhCcCcccCCCCcccCccCCCCceEEEEEechHHeEEC-cCC--CCHHHhhhhh
Confidence 988 679999962 268999999999999999 998 4443333224
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+..+++.++ +..+++++++|||+| +|++|++++|+|+..|++|+++++++++.+.++ ++|++.++++++.
T Consensus 140 ~~~~~~~~~-~~~~~~~g~~vlV~g-~g~vg~~~~q~a~~~G~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~------- 209 (319)
T cd08242 140 PLAAALEIL-EQVPITPGDKVAVLG-DGKLGLLIAQVLALTGPDVVLVGRHSEKLALAR-RLGVETVLPDEAE------- 209 (319)
T ss_pred HHHHHHHHH-HhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCeEEEEcCCHHHHHHHH-HcCCcEEeCcccc-------
Confidence 555666655 668899999999997 699999999999999999999999999999999 7999877766431
Q ss_pred HHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHH
Q 019332 216 KRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
+.+ ++|+++||.|+ ..+..++++++++|+++..+..... .......++.++.++.+.....
T Consensus 210 ---~~~~~~d~vid~~g~~~~~~~~~~~l~~~g~~v~~~~~~~~------~~~~~~~~~~~~~~i~~~~~~~-------- 272 (319)
T cd08242 210 ---SEGGGFDVVVEATGSPSGLELALRLVRPRGTVVLKSTYAGP------ASFDLTKAVVNEITLVGSRCGP-------- 272 (319)
T ss_pred ---ccCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC------CccCHHHheecceEEEEEeccc--------
Confidence 233 79999999988 6788999999999999986654321 1223445566777776653322
Q ss_pred HHHHHHHHHcCCc--eeeeeeeeccccHHHHHHHHHcCCccceEEEE
Q 019332 294 LEMIIPHIKEGKI--VYVEDMAEGLESAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 294 ~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~ 338 (342)
++++++++.++.+ .+.+...|+++++.+|++.+.++. .+|+|++
T Consensus 273 ~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~a~~~~~~~~-~~k~vi~ 318 (319)
T cd08242 273 FAPALRLLRKGLVDVDPLITAVYPLEEALEAFERAAEPG-ALKVLLR 318 (319)
T ss_pred HHHHHHHHHcCCCChhhceEEEEeHHHHHHHHHHHhcCC-ceEEEeC
Confidence 6778899999998 445677889999999999998775 5899885
|
This group contains members identified as related to zinc-dependent alcohol dehydrogenase and other members of the MDR family, including threonine dehydrogenase. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group includes various activities, including the founding alcohol dehydrogenase (ADH), quinone reducta |
| >cd08258 Zn_ADH4 Alcohol dehydrogenases of the MDR family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.3e-34 Score=255.23 Aligned_cols=271 Identities=23% Similarity=0.277 Sum_probs=220.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
||+|+..+. ++ ..++++++ |.| ++.+++|+||+.++++|++|++...+.+.....|.++|+|++| +|+.+
T Consensus 1 ~~~~~~~~~--~~---~~~~~~~~--~~p-~~~~~~v~V~v~~~~l~~~d~~~~~g~~~~~~~p~~~G~e~~G--~V~~v 70 (306)
T cd08258 1 MKALVKTGP--GP---GNVELREV--PEP-EPGPGEVLIKVAAAGICGSDLHIYKGDYDPVETPVVLGHEFSG--TIVEV 70 (306)
T ss_pred CeeEEEecC--CC---CceEEeec--CCC-CCCCCeEEEEEEEEEechhhHHHHcCCCCcCCCCeeeccceEE--EEEEE
Confidence 478887654 32 34666664 444 5689999999999999999998887765334457889999776 99999
Q ss_pred cCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 87 DSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|++++.+++||+|++. |+|++|+.++.+.++++ |++ ++++.++++.
T Consensus 71 G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~l-p~~--~~~~~aa~~~ 147 (306)
T cd08258 71 GPDVEGWKVGDRVVSETTFSTCGRCPYCRRGDYNLCPHRKGIGTQADGGFAEYVLVPEESLHEL-PEN--LSLEAAALTE 147 (306)
T ss_pred CCCcCcCCCCCEEEEccCcCCCCCCcchhCcCcccCCCCceeeecCCCceEEEEEcchHHeEEC-cCC--CCHHHHHhhc
Confidence 9999999999999874 78999999999999999 999 4444344788
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe--CChhhHHHHHHHcCCCeeEecCCchhHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA--GSKDKIDLLKNKFGFDEAFNYKEEPDLNE 213 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 213 (342)
.+++||+++...++++++++|||.| +|++|++++|+|+..|++|++++ +++++.++++ ++|++.+ +++.. ++.+
T Consensus 148 ~~~~a~~~l~~~~~~~~g~~vlI~g-~g~~g~~~~~la~~~G~~v~~~~~~~~~~~~~~~~-~~g~~~~-~~~~~-~~~~ 223 (306)
T cd08258 148 PLAVAVHAVAERSGIRPGDTVVVFG-PGPIGLLAAQVAKLQGATVVVVGTEKDEVRLDVAK-ELGADAV-NGGEE-DLAE 223 (306)
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEECCCCCHHHHHHHH-HhCCccc-CCCcC-CHHH
Confidence 8999999998888999999999976 69999999999999999988774 3445777777 8999887 88776 8888
Q ss_pred HHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchH
Q 019332 214 ALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP 291 (342)
Q Consensus 214 ~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 291 (342)
.+.+.+.+ ++|++|||.|+ ..+...+++|+++|+++.+|..++. ........++.+++++.|+.+.. .
T Consensus 224 ~l~~~~~~~~vd~vld~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~ 293 (306)
T cd08258 224 LVNEITDGDGADVVIECSGAVPALEQALELLRKGGRIVQVGIFGPL-----AASIDVERIIQKELSVIGSRSST-----P 293 (306)
T ss_pred HHHHHcCCCCCCEEEECCCChHHHHHHHHHhhcCCEEEEEcccCCC-----CcccCHHHHhhcCcEEEEEecCc-----h
Confidence 88887766 89999999976 7888999999999999999986532 12234555667999999988766 6
Q ss_pred HHHHHHHHHHHcC
Q 019332 292 KFLEMIIPHIKEG 304 (342)
Q Consensus 292 ~~~~~~~~~~~~g 304 (342)
++++++++++.+|
T Consensus 294 ~~~~~~~~~~~~~ 306 (306)
T cd08258 294 ASWETALRLLASG 306 (306)
T ss_pred HhHHHHHHHHhcC
Confidence 6788888888765
|
This group shares the zinc coordination sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of an beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH), quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous |
| >cd08245 CAD Cinnamyl alcohol dehydrogenases (CAD) and related proteins | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.4e-34 Score=257.18 Aligned_cols=298 Identities=23% Similarity=0.265 Sum_probs=238.5
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEec
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG 87 (342)
||++++++ |+. +++++ .|.| .+.+++|+|++.++++|++|...+.+......+|.++|+|++| +|+.+|
T Consensus 1 ~~~~~~~~--~~~----~~~~~--~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~p~~~g~e~~G--~v~~~g 69 (330)
T cd08245 1 KAAVVHAA--GGP----LEPEE--VPVP-EPGPGEVLIKIEACGVCHTDLHAAEGDWGGSKYPLVPGHEIVG--EVVEVG 69 (330)
T ss_pred CeEEEecC--CCC----ceEEe--ccCC-CCCCCeEEEEEEEEeccHHHHHHHcCCCCCCCCCcccCccceE--EEEEEC
Confidence 57788777 543 56665 4555 4689999999999999999998887765444567889999666 999999
Q ss_pred CCCCCCCCCCEEE----------------------------ec---cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 88 SENPEFKKGDLVW----------------------------GM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 88 ~~v~~~~vGd~V~----------------------------~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
++++++++||+|+ ++ |+|++|+.++.+.++++ |++++.. +++.++..
T Consensus 70 ~~~~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~v~~~~~~~~-p~~~~~~-~~~~l~~~ 147 (330)
T cd08245 70 AGVEGRKVGDRVGVGWLVGSCGRCEYCRRGLENLCQKAVNTGYTTQGGYAEYMVADAEYTVLL-PDGLPLA-QAAPLLCA 147 (330)
T ss_pred CCCcccccCCEEEEccccCCCCCChhhhCcCcccCcCccccCcccCCccccEEEEcHHHeEEC-CCCCCHH-Hhhhhhhh
Confidence 9999999999997 32 78999999999999999 9985444 37778899
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
+.+||+++.. .+++++++|||+|+ |++|++++++|+..|++|+++++++++.+.++ ++|++.++++... +....
T Consensus 148 ~~ta~~~l~~-~~~~~~~~vlI~g~-g~iG~~~~~~a~~~G~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~-- 221 (330)
T cd08245 148 GITVYSALRD-AGPRPGERVAVLGI-GGLGHLAVQYARAMGFETVAITRSPDKRELAR-KLGADEVVDSGAE-LDEQA-- 221 (330)
T ss_pred HHHHHHHHHh-hCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCcEEeccCCc-chHHh--
Confidence 9999999955 78999999999975 78999999999999999999999999999997 8998888877654 33222
Q ss_pred HHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHH
Q 019332 217 RYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLE 295 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 295 (342)
..+++|+++||.++ .....++++++++|+++.++..... ........++.++.++.+..... ...++
T Consensus 222 --~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~i~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 289 (330)
T cd08245 222 --AAGGADVILVTVVSGAAAEAALGGLRRGGRIVLVGLPESP-----PFSPDIFPLIMKRQSIAGSTHGG-----RADLQ 289 (330)
T ss_pred --ccCCCCEEEECCCcHHHHHHHHHhcccCCEEEEECCCCCC-----ccccchHHHHhCCCEEEEeccCC-----HHHHH
Confidence 22479999999886 7888999999999999999864332 11112334556666666554432 46788
Q ss_pred HHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 296 MIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 296 ~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
.+++++.++.+.+ ....++++++.++++.+.+++..||+|+
T Consensus 290 ~~~~ll~~~~l~~-~~~~~~~~~~~~a~~~~~~~~~~~~~v~ 330 (330)
T cd08245 290 EALDFAAEGKVKP-MIETFPLDQANEAYERMEKGDVRFRFVL 330 (330)
T ss_pred HHHHHHHcCCCcc-eEEEEcHHHHHHHHHHHHcCCCCcceeC
Confidence 8899999999886 4456899999999999999998888875
|
Cinnamyl alcohol dehydrogenases (CAD), members of the medium chain dehydrogenase/reductase family, reduce cinnamaldehydes to cinnamyl alcohols in the last step of monolignal metabolism in plant cells walls. CAD binds 2 zinc ions and is NADPH- dependent. CAD family members are also found in non-plant species, e.g. in yeast where they have an aldehyde reductase activity. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an |
| >cd08241 QOR1 Quinone oxidoreductase (QOR) | Back alignment and domain information |
|---|
Probab=100.00 E-value=1.6e-33 Score=251.49 Aligned_cols=314 Identities=26% Similarity=0.361 Sum_probs=253.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|+|+++.+. +.+ ..+.+.+ .+ |.+..+++++||+.++++|++|+..+.+... ....|.++|||++| +|+.
T Consensus 1 ~~~~~~~~~--~~~--~~~~~~~--~~-~~~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~ 71 (323)
T cd08241 1 MKAVVCKEL--GGP--EDLVLEE--VP-PEPGAPGEVRIRVEAAGVNFPDLLMIQGKYQVKPPLPFVPGSEVAG--VVEA 71 (323)
T ss_pred CeEEEEecC--CCc--ceeEEec--CC-CCCCCCCeEEEEEEEEecCHHHHHHHcCCCCCCCCCCCcccceeEE--EEEE
Confidence 478888876 555 3455544 44 4343369999999999999999988776542 22346689999776 9999
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
+|++++.+++||+|+++ |++++|+.++.+.++++ |++++.. +++.+..++.+|++++....++.++++|+|+|++
T Consensus 72 ~g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~ 149 (323)
T cd08241 72 VGEGVTGFKVGDRVVALTGQGGFAEEVVVPAAAVFPL-PDGLSFE-EAAALPVTYGTAYHALVRRARLQPGETVLVLGAA 149 (323)
T ss_pred eCCCCCCCCCCCEEEEecCCceeEEEEEcCHHHceeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 99999999999999996 68999999999999999 9984443 3667888999999999777889999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++++|+..|++|+.+++++++.+.++ ++|++.+++.... ++.+.+.+.+.+ ++|.++||.|+.....++++
T Consensus 150 ~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~i~~~~~~~~~d~v~~~~g~~~~~~~~~~ 227 (323)
T cd08241 150 GGVGLAAVQLAKALGARVIAAASSEEKLALAR-ALGADHVIDYRDP-DLRERVKALTGGRGVDVVYDPVGGDVFEASLRS 227 (323)
T ss_pred chHHHHHHHHHHHhCCEEEEEeCCHHHHHHHH-HcCCceeeecCCc-cHHHHHHHHcCCCCcEEEEECccHHHHHHHHHh
Confidence 99999999999999999999999999999998 8998888888776 788888888776 89999999999888899999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc----ccchHHHHHHHHHHHHcCCceeeeeeeeccc
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE 317 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~ 317 (342)
++++|+++.+|..... .........+.+++++.+.....+ +....+.++++++++.++.+.+.....++++
T Consensus 228 ~~~~g~~v~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (323)
T cd08241 228 LAWGGRLLVIGFASGE-----IPQIPANLLLLKNISVVGVYWGAYARREPELLRANLAELFDLLAEGKIRPHVSAVFPLE 302 (323)
T ss_pred hccCCEEEEEccCCCC-----cCcCCHHHHhhcCcEEEEEecccccchhHHHHHHHHHHHHHHHHCCCcccccceEEcHH
Confidence 9999999999864321 111122234567788777654433 1223466788999999999887777778999
Q ss_pred cHHHHHHHHHcCCccceEEEE
Q 019332 318 SAPATLIGLFSGRNVGKQVVA 338 (342)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvv~ 338 (342)
++.++++.+.++...+|++++
T Consensus 303 ~~~~~~~~~~~~~~~~~vvv~ 323 (323)
T cd08241 303 QAAEALRALADRKATGKVVLT 323 (323)
T ss_pred HHHHHHHHHHhCCCCCcEEeC
Confidence 999999999988888898863
|
QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR acts in the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts ethanol and NAD+ to acetaldehyde and NADH, while in yeast and some other microorganisms ADH catalyzes the conversion acetaldehyde to ethanol in alcoholic |
| >cd05289 MDR_like_2 alcohol dehydrogenase and quinone reductase-like medium chain degydrogenases/reductases | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.9e-33 Score=247.65 Aligned_cols=299 Identities=26% Similarity=0.379 Sum_probs=240.2
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~v 83 (342)
|+|+++..+ +.+. .+.+ .+.+.| ++++++|+||+.++++|+.|+..+.+... ....|.++|||++| +|
T Consensus 1 ~~~~~~~~~--~~~~--~~~~--~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G--~v 71 (309)
T cd05289 1 MKAVRIHEY--GGPE--VLEL--ADVPTP-EPGPGEVLVKVHAAGVNPVDLKIREGLLKAAFPLTLPLIPGHDVAG--VV 71 (309)
T ss_pred CceEEEccc--CCcc--ceee--cccCCC-CCCCCeEEEEEEEeeCCHHHHHHhcCCccccCCCCCCCccccceeE--EE
Confidence 578888877 6552 2344 345545 56899999999999999999988776432 23447889999766 99
Q ss_pred EEecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 84 KVLDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+.+|++++++++||+|+++ |+|++|+.++...++++ |+++++. .++.+++.+.++++++.+..++.++++|+
T Consensus 72 ~~~G~~~~~~~~G~~V~~~~~~~~~g~~~~~~~~~~~~~~~~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vl 149 (309)
T cd05289 72 VAVGPGVTGFKVGDEVFGMTPFTRGGAYAEYVVVPADELALK-PANLSFE-EAAALPLAGLTAWQALFELGGLKAGQTVL 149 (309)
T ss_pred EeeCCCCCCCCCCCEEEEccCCCCCCcceeEEEecHHHhccC-CCCCCHH-HHHhhhHHHHHHHHHHHhhcCCCCCCEEE
Confidence 9999999999999999985 68999999999999999 9985444 36778888999999998777799999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLD 236 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 236 (342)
|+|++|++|++++++++..|++|+++++++ +.+.++ ++|.+.+++.+.. ++.+ .+.+ ++|+++||.|+....
T Consensus 150 v~g~~g~~g~~~~~~a~~~g~~v~~~~~~~-~~~~~~-~~g~~~~~~~~~~-~~~~----~~~~~~~d~v~~~~~~~~~~ 222 (309)
T cd05289 150 IHGAAGGVGSFAVQLAKARGARVIATASAA-NADFLR-SLGADEVIDYTKG-DFER----AAAPGGVDAVLDTVGGETLA 222 (309)
T ss_pred EecCCchHHHHHHHHHHHcCCEEEEEecch-hHHHHH-HcCCCEEEeCCCC-chhh----ccCCCCceEEEECCchHHHH
Confidence 999999999999999999999999998877 778887 8998888887765 5443 3333 799999999998889
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
.++++++++|+++.+|..... . . ..+.+++++....+.. . .+.+.++++++.++.+.+.+...+++
T Consensus 223 ~~~~~l~~~g~~v~~g~~~~~-------~-~--~~~~~~~~~~~~~~~~--~--~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (309)
T cd05289 223 RSLALVKPGGRLVSIAGPPPA-------E-Q--AAKRRGVRAGFVFVEP--D--GEQLAELAELVEAGKLRPVVDRVFPL 288 (309)
T ss_pred HHHHHHhcCcEEEEEcCCCcc-------h-h--hhhhccceEEEEEecc--c--HHHHHHHHHHHHCCCEEEeeccEEcH
Confidence 999999999999999864321 0 0 2334555555443321 1 56788899999999988777778899
Q ss_pred ccHHHHHHHHHcCCccceEEE
Q 019332 317 ESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv 337 (342)
+++.++++.+.+++..+|+++
T Consensus 289 ~~~~~a~~~~~~~~~~~kvv~ 309 (309)
T cd05289 289 EDAAEAHERLESGHARGKVVL 309 (309)
T ss_pred HHHHHHHHHHHhCCCCCcEeC
Confidence 999999999998887788874
|
Members identified as zinc-dependent alcohol dehydrogenases and quinone oxidoreductase. QOR catalyzes the conversion of a quinone + NAD(P)H to a hydroquinone + NAD(P)+. Quinones are cyclic diones derived from aromatic compounds. Membrane bound QOR actin the respiratory chains of bacteria and mitochondria, while soluble QOR acts to protect from toxic quinones (e.g. DT-diaphorase) or as a soluble eye-lens protein in some vertebrates (e.g. zeta-crystalin). QOR reduces quinones through a semi-quinone intermediate via a NAD(P)H-dependent single electron transfer. QOR is a member of the medium chain dehydrogenase/reductase family, but lacks the zinc-binding sites of the prototypical alcohol dehydrogenases of this group. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes, or ketones. Alcohol dehydrogenase in the liver converts et |
| >cd08275 MDR3 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=2.2e-32 Score=246.02 Aligned_cols=318 Identities=24% Similarity=0.358 Sum_probs=246.5
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEEe
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~v 86 (342)
||+.+.+. +.+ ..+.+.+ .+.| ++++++|+||+.++++|+.|+..+.+... .+..|.++|||++| +|+.+
T Consensus 1 ~~~~~~~~--~~~--~~~~~~~--~~~~-~~~~~~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~g~e~~G--~v~~~ 71 (337)
T cd08275 1 RAVVLTGF--GGL--DKLKVEK--EALP-EPSSGEVRVRVEACGLNFADLMARQGLYDSAPKPPFVPGFECAG--TVEAV 71 (337)
T ss_pred CeEEEcCC--CCc--cceEEEe--cCCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCcceeEE--EEEEE
Confidence 45666655 444 3456655 4444 46899999999999999999988776542 23446789999776 99999
Q ss_pred cCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCc
Q 019332 87 DSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASG 163 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g 163 (342)
|++++++++||+|+++ |+|++|+.++.+.++++ |++++.. +++.++.++.+||+++...++++++++|+|+|++|
T Consensus 72 g~~~~~~~~G~~V~~~~~~~~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~~~~vli~g~~g 149 (337)
T cd08275 72 GEGVKDFKVGDRVMGLTRFGGYAEVVNVPADQVFPL-PDGMSFE-EAAAFPVNYLTAYYALFELGNLRPGQSVLVHSAAG 149 (337)
T ss_pred CCCCcCCCCCCEEEEecCCCeeeeEEEecHHHeEEC-CCCCCHH-HHhhhhHHHHHHHHHHHHhhCCCCCCEEEEEcCcc
Confidence 9999999999999997 78999999999999999 9984433 36778889999999998888999999999999999
Q ss_pred HHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhh
Q 019332 164 AVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM 242 (342)
Q Consensus 164 ~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l 242 (342)
++|++++++|+.. +..++... ++++.+.++ ++|++.+++++.. ++.+.+++.+.+++|+++||.|+.....+++++
T Consensus 150 ~~g~~~~~~a~~~~~~~~~~~~-~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~v~~~~g~~~~~~~~~~l 226 (337)
T cd08275 150 GVGLAAGQLCKTVPNVTVVGTA-SASKHEALK-ENGVTHVIDYRTQ-DYVEEVKKISPEGVDIVLDALGGEDTRKSYDLL 226 (337)
T ss_pred hHHHHHHHHHHHccCcEEEEeC-CHHHHHHHH-HcCCcEEeeCCCC-cHHHHHHHHhCCCceEEEECCcHHHHHHHHHhh
Confidence 9999999999998 43433332 355778887 8999888888876 788888887755899999999998888999999
Q ss_pred hhCCEEEEEceeccccCCC-C----------ccccchHHHHhcceeeecceeccc---ccchHHHHHHHHHHHHcCCcee
Q 019332 243 KIHGRIAVCGMISQYNLDR-P----------EGVHNLMYLVTKRVRMEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVY 308 (342)
Q Consensus 243 ~~~G~~v~~g~~~~~~~~~-~----------~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~ 308 (342)
+++|+++.+|.....+... . .........+.+++++.+...... .......+.++++++.++.+.+
T Consensus 227 ~~~g~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 306 (337)
T cd08275 227 KPMGRLVVYGAANLVTGEKRSWFKLAKKWWNRPKVDPMKLISENKSVLGFNLGWLFEERELLTEVMDKLLKLYEEGKIKP 306 (337)
T ss_pred ccCcEEEEEeecCCcCcccccccccccccccccccCHHHHhhcCceEEEeechhhhhChHHHHHHHHHHHHHHHCCCCCC
Confidence 9999999998654321000 0 001112345677788777654322 1122345788889999999887
Q ss_pred eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 309 VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 309 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.....|++++++++++.+.+++..||+++++
T Consensus 307 ~~~~~~~~~~~~~~~~~~~~~~~~~kvv~~~ 337 (337)
T cd08275 307 KIDSVFPFEEVGEAMRRLQSRKNIGKVVLTP 337 (337)
T ss_pred ceeeEEcHHHHHHHHHHHHcCCCcceEEEeC
Confidence 7777889999999999999988889999864
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >cd05195 enoyl_red enoyl reductase of polyketide synthase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.5e-33 Score=245.61 Aligned_cols=284 Identities=21% Similarity=0.279 Sum_probs=233.6
Q ss_pred CcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec--cccceeEeecCCccee
Q 019332 41 NGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM--TGWEEYSLVTAPQLFK 118 (342)
Q Consensus 41 ~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~--g~~~~~~~v~~~~~~~ 118 (342)
++|+||+.++++|++|++...+.. ..+|.++|||++| +|+++|++++++++||+|+++ |+|++|+.++.+.+++
T Consensus 1 ~~v~i~v~~~~~~~~d~~~~~g~~--~~~~~~~g~e~~G--~v~~~g~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~ 76 (293)
T cd05195 1 DEVEVEVKAAGLNFRDVLVALGLL--PGDETPLGLECSG--IVTRVGSGVTGLKVGDRVMGLAPGAFATHVRVDARLVVK 76 (293)
T ss_pred CceEEEEEEEecCHHHHHHHhCCC--CCCCCccceeeeE--EEEeecCCccCCCCCCEEEEEecCcccceEEechhheEe
Confidence 489999999999999998887743 2357889999776 999999999999999999998 7999999999999999
Q ss_pred ecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC
Q 019332 119 IQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG 198 (342)
Q Consensus 119 i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g 198 (342)
+ |++++.. +++.+++++.++++++.+..++++|++|+|+|++|++|++++++++..|++|+++++++++.+.++ +++
T Consensus 77 ~-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~g~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~~ 153 (293)
T cd05195 77 I-PDSLSFE-EAATLPVAYLTAYYALVDLARLQKGESVLIHAAAGGVGQAAIQLAQHLGAEVFATVGSEEKREFLR-ELG 153 (293)
T ss_pred C-CCCCCHH-HHhhchHHHHHHHHHHHHHhccCCCCEEEEecCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HhC
Confidence 9 9984444 367778899999999988789999999999999999999999999999999999999999989888 777
Q ss_pred --CCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcc
Q 019332 199 --FDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKR 275 (342)
Q Consensus 199 --~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~ 275 (342)
++.++++... ++.+.+++.+.+ ++|+++||.|+..+..++++++++|+++.+|....... .......+.++
T Consensus 154 ~~~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~~-----~~~~~~~~~~~ 227 (293)
T cd05195 154 GPVDHIFSSRDL-SFADGILRATGGRGVDVVLNSLSGELLRASWRCLAPFGRFVEIGKRDILSN-----SKLGMRPFLRN 227 (293)
T ss_pred CCcceEeecCch-hHHHHHHHHhCCCCceEEEeCCCchHHHHHHHhcccCceEEEeeccccccC-----CccchhhhccC
Confidence 6778888776 788888888876 89999999999888999999999999999986543210 01111223345
Q ss_pred eeeecceeccc----ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 276 VRMEGFLVRDY----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 276 ~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
+.+....+..+ +....+.+..+++++.++.+.+.....++++++.++++.+.++...||+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~ivv 293 (293)
T cd05195 228 VSFSSVDLDQLARERPELLRELLREVLELLEAGVLKPLPPTVVPSASEIDAFRLMQSGKHIGKVVL 293 (293)
T ss_pred CeEEEEeHHHHhhhChHHHHHHHHHHHHHHHCCCcccCCCeeechhhHHHHHHHHhcCCCCceecC
Confidence 55544433222 223345678899999999998777778899999999999998888888874
|
Putative enoyl reductase of polyketide synthase. Polyketide synthases produce polyketides in step by step mechanism that is similar to fatty acid synthesis. Enoyl reductase reduces a double to single bond. Erythromycin is one example of a polyketide generated by 3 complex enzymes (megasynthases). 2-enoyl thioester reductase (ETR) catalyzes the NADPH-dependent dependent conversion of trans-2-enoyl acyl carrier protein/coenzyme A (ACP/CoA) to acyl-(ACP/CoA) in fatty acid synthesis. 2-enoyl thioester reductase activity has been linked in Candida tropicalis as essential in maintaining mitiochondrial respiratory function. This ETR family is a part of the medium chain dehydrogenase/reductase family, but lack the zinc coordination sites characteristic of the alcohol dehydrogenases in this family. NAD(P)(H)-dependent oxidoreductases are the major enzymes in the interconversion of alcohols and aldehydes or ketones. Alcohol dehydrogenase |
| >cd08267 MDR1 Medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.7e-32 Score=242.67 Aligned_cols=293 Identities=27% Similarity=0.305 Sum_probs=222.6
Q ss_pred EEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec--
Q 019332 28 TESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM-- 102 (342)
Q Consensus 28 ~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~-- 102 (342)
...+.|.| ++++++|+|++.++++|++|++.+.|..+ ....|..+|||++| +|+++|++++++++||+|+++
T Consensus 15 ~~~~~~~~-~~~~~~v~v~v~~~~i~~~d~~~~~g~~~~~~~~~~~~~~g~e~~G--~v~~~G~~v~~~~~Gd~V~~~~~ 91 (319)
T cd08267 15 LEVEVPIP-TPKPGEVLVKVHAASVNPVDWKLRRGPPKLLLGRPFPPIPGMDFAG--EVVAVGSGVTRFKVGDEVFGRLP 91 (319)
T ss_pred ccccCCCC-CCCCCEEEEEEEEeeCCHHHHHHHcCCCcccccCCCCCcccceeeE--EEEEeCCCCCCCCCCCEEEEecc
Confidence 33345555 56899999999999999999988776542 12346789999665 999999999999999999985
Q ss_pred ----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC
Q 019332 103 ----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 178 (342)
Q Consensus 103 ----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga 178 (342)
|+|++|+.++.+.++++ |++++.. +++.+++++.+||+++....+++++++|+|+|++|++|++++++|+..|+
T Consensus 92 ~~~~g~~~~~~~~~~~~~~~i-p~~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vli~g~~g~~g~~~~~la~~~g~ 169 (319)
T cd08267 92 PKGGGALAEYVVAPESGLAKK-PEGVSFE-EAAALPVAGLTALQALRDAGKVKPGQRVLINGASGGVGTFAVQIAKALGA 169 (319)
T ss_pred CCCCceeeEEEEechhheEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhcCCCCCCEEEEEcCCcHHHHHHHHHHHHcCC
Confidence 68999999999999999 9984443 37788899999999998877899999999999999999999999999999
Q ss_pred EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChh--hHHHHHHhhhhCCEEEEEceec
Q 019332 179 YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGK--MLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 179 ~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|++++++ ++.+.++ ++|++.+++++.. ++. +..+.+ ++|+++||.|+. .....+..++++|+++.+|...
T Consensus 170 ~v~~~~~~-~~~~~~~-~~g~~~~~~~~~~-~~~---~~~~~~~~~d~vi~~~~~~~~~~~~~~~~l~~~g~~i~~g~~~ 243 (319)
T cd08267 170 HVTGVCST-RNAELVR-SLGADEVIDYTTE-DFV---ALTAGGEKYDVIFDAVGNSPFSLYRASLALKPGGRYVSVGGGP 243 (319)
T ss_pred EEEEEeCH-HHHHHHH-HcCCCEeecCCCC-Ccc---hhccCCCCCcEEEECCCchHHHHHHhhhccCCCCEEEEecccc
Confidence 99999865 7778887 8999888887664 443 334444 899999999953 3333444499999999998754
Q ss_pred cccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceE
Q 019332 256 QYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQ 335 (342)
Q Consensus 256 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkv 335 (342)
..................+.+... ... .. .+.+.++++++.++.+.+.+...|+++++++|++.+.+++..+|+
T Consensus 244 ~~~~~~~~~~~~~~~~~~~~~~~~--~~~--~~--~~~~~~~~~~l~~~~~~~~~~~~~~~~~i~~a~~~~~~~~~~~~v 317 (319)
T cd08267 244 SGLLLVLLLLPLTLGGGGRRLKFF--LAK--PN--AEDLEQLAELVEEGKLKPVIDSVYPLEDAPEAYRRLKSGRARGKV 317 (319)
T ss_pred ccccccccccchhhccccceEEEE--Eec--CC--HHHHHHHHHHHHCCCeeeeeeeEEcHHHHHHHHHHHhcCCCCCcE
Confidence 321100000000001111222211 111 11 667888999999999988777888999999999999988878888
Q ss_pred EE
Q 019332 336 VV 337 (342)
Q Consensus 336 vv 337 (342)
++
T Consensus 318 vv 319 (319)
T cd08267 318 VI 319 (319)
T ss_pred eC
Confidence 74
|
This group is a member of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, but lacks the zinc-binding sites of the zinc-dependent alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P)-binding Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcoh |
| >KOG1202 consensus Animal-type fatty acid synthase and related proteins [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-33 Score=261.96 Aligned_cols=297 Identities=21% Similarity=0.224 Sum_probs=251.9
Q ss_pred EEEEeecccc--CCCCCCcEEEEEEeeecCcccccccccCCCCc-------cccCCCCCcccccEEEEEecCCCCCCCCC
Q 019332 26 YMTESSIELQ--VPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSY-------VESFKPGMPISGYGVAKVLDSENPEFKKG 96 (342)
Q Consensus 26 ~~~~~~~~~p--~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~-------~~p~~~G~e~~G~g~v~~vG~~v~~~~vG 96 (342)
++++.+.|.. .+..++.=+.-|.|+++|..|+....|+...- .-..++|-||+| + .+.|
T Consensus 1428 SlrWies~~~~a~~~~~~~e~CtVYYAplNFRDiMLasGkL~~DAiPG~~a~qdclLGmEFsG--R----------d~~G 1495 (2376)
T KOG1202|consen 1428 SLRWIESPLRHAQPTCPGLELCTVYYAPLNFRDIMLASGKLSPDAIPGDLASQDCLLGMEFSG--R----------DASG 1495 (2376)
T ss_pred ceeeeecchhhcCCCCCCCceeEEEeccccHHHHHHhcCCCCcccCCCccchhhheeceeecc--c----------cCCC
Confidence 4556665544 55678888999999999999999988876321 123467888877 3 5789
Q ss_pred CEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHH
Q 019332 97 DLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFA 173 (342)
Q Consensus 97 d~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la 173 (342)
.||+++ -++++.+.++.+.+|.+ |+++.+. ++++.|+.|+||||||...+..++|+++|||+++||+|++||.+|
T Consensus 1496 rRvM~mvpAksLATt~l~~rd~lWev-P~~WTle-eAstVP~VYsTaYYALVvRG~mkkGekiLIHaGsGGVGQAAIaiA 1573 (2376)
T KOG1202|consen 1496 RRVMGMVPAKSLATTVLASRDFLWEV-PSKWTLE-EASTVPVVYSTAYYALVVRGQMKKGEKILIHAGSGGVGQAAIAIA 1573 (2376)
T ss_pred cEEEEeeehhhhhhhhhcchhhhhhC-Ccccchh-hcccCceEeeeehhhhhhhccccCCcEEEEecCCCchhHHHHHHH
Confidence 999999 47999999999999999 9995554 488999999999999999999999999999999999999999999
Q ss_pred HHcCCEEEEEeCChhhHHHHHHHcCC---CeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEE
Q 019332 174 KLLGCYVVGSAGSKDKIDLLKNKFGF---DEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 174 ~~~ga~Vi~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v 249 (342)
.+.|++|+.++.|.+|++++.+.|.- ..+-|.++. +|..-+.+.|+| |+|+|+|....+.++.+++||+-+|||.
T Consensus 1574 La~G~~VFTTVGSaEKRefL~~rFPqLqe~~~~NSRdt-sFEq~vl~~T~GrGVdlVLNSLaeEkLQASiRCLa~~GRFL 1652 (2376)
T KOG1202|consen 1574 LAHGCTVFTTVGSAEKREFLLKRFPQLQETNFANSRDT-SFEQHVLWHTKGRGVDLVLNSLAEEKLQASIRCLALHGRFL 1652 (2376)
T ss_pred HHcCCEEEEecCcHHHHHHHHHhchhhhhhcccccccc-cHHHHHHHHhcCCCeeeehhhhhHHHHHHHHHHHHhcCeee
Confidence 99999999999999999999865543 567788887 899999999999 9999999999999999999999999999
Q ss_pred EEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHH----HHcCCceeeeeeeeccccHHHHHHH
Q 019332 250 VCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH----IKEGKIVYVEDMAEGLESAPATLIG 325 (342)
Q Consensus 250 ~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~g~~~~~~~~~~~l~~~~~a~~~ 325 (342)
.+|...-+ .+....+..|.+|.++.|..+..+++...+...++..+ +++|.++|.+..+|+-.++++||++
T Consensus 1653 EIGKfDLS-----qNspLGMavfLkNvsfHGiLLDsvmege~e~~~ev~~Lv~eGIksGvV~PL~ttvF~~~qvE~AFRf 1727 (2376)
T KOG1202|consen 1653 EIGKFDLS-----QNSPLGMAVFLKNVSFHGILLDSVMEGEEEMWREVAALVAEGIKSGVVRPLPTTVFHGQQVEDAFRF 1727 (2376)
T ss_pred eecceecc-----cCCcchhhhhhcccceeeeehhhhhcCcHHHHHHHHHHHHhhhccCceeccccccccHHHHHHHHHH
Confidence 99975432 44556788999999999988877765545555555555 5567899999999999999999999
Q ss_pred HHcCCccceEEEEecCC
Q 019332 326 LFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 326 ~~~~~~~gkvvv~~~~~ 342 (342)
|.+|+++||+|+++.+|
T Consensus 1728 MasGKHIGKVvikvr~e 1744 (2376)
T KOG1202|consen 1728 MASGKHIGKVVIKVRAE 1744 (2376)
T ss_pred HhccCccceEEEEEccc
Confidence 99999999999998654
|
|
| >smart00829 PKS_ER Enoylreductase | Back alignment and domain information |
|---|
Probab=100.00 E-value=6.1e-32 Score=237.33 Aligned_cols=279 Identities=20% Similarity=0.272 Sum_probs=227.2
Q ss_pred EEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec--cccceeEeecCCcceeecCC
Q 019332 45 LKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM--TGWEEYSLVTAPQLFKIQHT 122 (342)
Q Consensus 45 Ikv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~--g~~~~~~~v~~~~~~~i~p~ 122 (342)
||+.++++|++|++.+.+.+ ..|.++|+|++| +|+++|++++.+++||+|+++ |+|++|+.++.+.++++ |+
T Consensus 2 i~v~~~~i~~~d~~~~~g~~---~~~~~~g~e~~G--~v~~~G~~~~~~~~Gd~V~~~~~g~~~~~~~~~~~~~~~~-p~ 75 (288)
T smart00829 2 VEVRAAGLNFRDVLIALGLL---PGEAVLGGECAG--VVTRVGPGVTGLAVGDRVMGLAPGSFATYVRTDARLVVPI-PD 75 (288)
T ss_pred eeEEEEecCHHHHHHhcCCC---CCCCCCCceeEE--EEEeeCCCCcCCCCCCEEEEEcCCceeeEEEccHHHeEEC-CC
Confidence 78999999999998887743 235789999666 999999999999999999997 79999999999999999 99
Q ss_pred CCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C
Q 019332 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D 200 (342)
Q Consensus 123 ~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~ 200 (342)
+++.. +++.+++.+.++++++.+...+.++++|+|+|++|++|++++++++..|++|+++++++++.+.++ ++|+ +
T Consensus 76 ~~~~~-~~~~~~~~~~~a~~~~~~~~~~~~g~~vlv~g~~~~~g~~~~~~a~~~g~~v~~~~~~~~~~~~~~-~~g~~~~ 153 (288)
T smart00829 76 GLSFE-EAATVPVVFLTAYYALVDLARLRPGESVLIHAAAGGVGQAAIQLAQHLGAEVFATAGSPEKRDFLR-ELGIPDD 153 (288)
T ss_pred CCCHH-HHHhchHHHHHHHHHHHHHhCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCChh
Confidence 84444 377888899999999877788999999999999999999999999999999999999999999998 8998 6
Q ss_pred eeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeee
Q 019332 201 EAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRME 279 (342)
Q Consensus 201 ~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~ 279 (342)
.+++++.. ++.+.+++.+.+ ++|+++|++|+..+..++++++++|+++.+|...... ....... .+.+++++.
T Consensus 154 ~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~~~~~~~~~~~~l~~~g~~v~~g~~~~~~----~~~~~~~-~~~~~~~~~ 227 (288)
T smart00829 154 HIFSSRDL-SFADEILRATGGRGVDVVLNSLAGEFLDASLRCLAPGGRFVEIGKRDIRD----NSQLGMA-PFRRNVSYH 227 (288)
T ss_pred heeeCCCc-cHHHHHHHHhCCCCcEEEEeCCCHHHHHHHHHhccCCcEEEEEcCcCCcc----ccccchh-hhcCCceEE
Confidence 78888876 788888887776 8999999999888889999999999999998643210 0111111 234555555
Q ss_pred cceeccc---ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 280 GFLVRDY---YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 280 ~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
+..+... +....+.+.++++++.++.+.+.....++++++.++++.+..++..+|+++
T Consensus 228 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ivv 288 (288)
T smart00829 228 AVDLDALEEGPDRIRELLAEVLELFAEGVLRPLPVTVFPISDVEDAFRYMQQGKHIGKVVL 288 (288)
T ss_pred EEEHHHhhcChHHHHHHHHHHHHHHHCCCccCcCceEEcHHHHHHHHHHHhcCCCcceEeC
Confidence 5433211 222345677888999999887766667899999999999998877788764
|
Enoylreductase in Polyketide synthases. |
| >TIGR03366 HpnZ_proposed putative phosphonate catabolism associated alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=100.00 E-value=3.3e-31 Score=231.93 Aligned_cols=229 Identities=19% Similarity=0.227 Sum_probs=184.9
Q ss_pred CCCCcccccEEEEEecCCCC------CCCCCCEEEe-------------------------------------cccccee
Q 019332 72 KPGMPISGYGVAKVLDSENP------EFKKGDLVWG-------------------------------------MTGWEEY 108 (342)
Q Consensus 72 ~~G~e~~G~g~v~~vG~~v~------~~~vGd~V~~-------------------------------------~g~~~~~ 108 (342)
++|||++| +|+++|++|+ ++++||||+. .|+|+||
T Consensus 1 v~GHE~~G--~V~~vG~~v~~~~~~~~~~~GdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~~~~~~~G~~aey 78 (280)
T TIGR03366 1 VLGHEIVG--EVVALRGGFTPADDGVPLRLGQRVVWSVTVPCGRCFRCRRGLPQKCDSLRKYGHEALDSGWPLSGGYAEH 78 (280)
T ss_pred CCCcccce--EEEEeCCCccccccCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCChhhcCcccccCCccccccceee
Confidence 58999777 9999999999 8999999963 1679999
Q ss_pred EeecCC-cceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCC
Q 019332 109 SLVTAP-QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGS 186 (342)
Q Consensus 109 ~~v~~~-~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s 186 (342)
+.++++ .++++ |++++.. .++.+++.+.||++++.+ ....++++|||+|+ |++|++++|+|+..|++ |++++++
T Consensus 79 ~~v~~~~~~~~l-P~~~~~~-~aa~l~~~~~ta~~al~~-~~~~~g~~VlV~G~-G~vG~~~~~~ak~~G~~~Vi~~~~~ 154 (280)
T TIGR03366 79 CHLPAGTAIVPV-PDDLPDA-VAAPAGCATATVMAALEA-AGDLKGRRVLVVGA-GMLGLTAAAAAAAAGAARVVAADPS 154 (280)
T ss_pred EEecCCCcEEEC-CCCCCHH-HhhHhhhHHHHHHHHHHh-ccCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCC
Confidence 999998 69999 9995443 277788889999999855 45679999999986 99999999999999995 8889889
Q ss_pred hhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCcc
Q 019332 187 KDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEG 264 (342)
Q Consensus 187 ~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 264 (342)
++|.++++ ++|++.++++.+ ..+.+++.+.+ ++|++|||+|+ ..+..++++++++|+++.+|..... ...
T Consensus 155 ~~r~~~a~-~~Ga~~~i~~~~---~~~~~~~~~~~~g~d~vid~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~ 226 (280)
T TIGR03366 155 PDRRELAL-SFGATALAEPEV---LAERQGGLQNGRGVDVALEFSGATAAVRACLESLDVGGTAVLAGSVFPG----GPV 226 (280)
T ss_pred HHHHHHHH-HcCCcEecCchh---hHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEeccCCCC----Cce
Confidence 99999998 999988887653 34566777766 89999999997 6789999999999999999975321 012
Q ss_pred ccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcC--Cce--eeeeeeeccccH
Q 019332 265 VHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEG--KIV--YVEDMAEGLESA 319 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~~~--~~~~~~~~l~~~ 319 (342)
..+...++.+++++.++.... .+.++++++++.++ .+. ..++.+||++++
T Consensus 227 ~i~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~l~~~~~~~~~~~~it~~~~l~~~ 280 (280)
T TIGR03366 227 ALDPEQVVRRWLTIRGVHNYE-----PRHLDQAVRFLAANGQRFPFEELVGKPFPLADV 280 (280)
T ss_pred eeCHHHHHhCCcEEEecCCCC-----HHHHHHHHHHHHhhCCCCCHHHHhhcccccccC
Confidence 345667788999998876543 56788899999874 443 346666788763
|
This clade of zinc-binding alcohol dehydrogenases (members of pfam00107) are repeatedly associated with genes proposed to be involved with the catabolism of phosphonate compounds. |
| >cd05188 MDR Medium chain reductase/dehydrogenase (MDR)/zinc-dependent alcohol dehydrogenase-like family | Back alignment and domain information |
|---|
Probab=99.97 E-value=3.6e-30 Score=224.32 Aligned_cols=241 Identities=27% Similarity=0.314 Sum_probs=198.9
Q ss_pred cEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec------------------
Q 019332 42 GVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM------------------ 102 (342)
Q Consensus 42 ~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~------------------ 102 (342)
||+||+.++++|+.|+..+.+..+ ...+|.++|+|++| +|+++|++++.+++||+|+++
T Consensus 1 ~v~i~v~~~~i~~~d~~~~~g~~~~~~~~~~~~G~e~~G--~v~~~G~~v~~~~~Gd~V~~~~~~~~~~~~~~~~~~~~~ 78 (271)
T cd05188 1 EVLVRVEAAGLCGTDLHIRRGGYPPPPKLPLILGHEGAG--VVVEVGPGVTGVKVGDRVVVLPNLGCGTCELCRELCPGG 78 (271)
T ss_pred CeEEEEEEEEecchhHHHHcCCCCcCCCCCcccccccEE--EEEEECCCCCcCCCCCEEEEcCCCCCCCCHHHHhhCCCC
Confidence 689999999999999998887653 34457889999666 999999999999999999974
Q ss_pred --------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHH
Q 019332 103 --------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAK 174 (342)
Q Consensus 103 --------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~ 174 (342)
|+|++|+.++.+.++++ |+++++. +++.++.++.+|++++.....++++++|||+|+++ +|++++++++
T Consensus 79 ~~~~~~~~g~~~~~~~v~~~~~~~i-p~~~~~~-~a~~~~~~~~~a~~~l~~~~~~~~~~~vli~g~~~-~G~~~~~~a~ 155 (271)
T cd05188 79 GILGEGLDGGFAEYVVVPADNLVPL-PDGLSLE-EAALLPEPLATAYHALRRAGVLKPGDTVLVLGAGG-VGLLAAQLAK 155 (271)
T ss_pred CEeccccCCcceEEEEechHHeEEC-CCCCCHH-HhhHhcCHHHHHHHHHHhccCCCCCCEEEEECCCH-HHHHHHHHHH
Confidence 67999999999999999 9984444 37788899999999998877779999999999866 9999999999
Q ss_pred HcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEc
Q 019332 175 LLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 175 ~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 252 (342)
..|++|+++++++++.+.++ ++|++.++++.+. +..+.+. ...+ ++|+++|++++ .....++++++++|+++.++
T Consensus 156 ~~g~~v~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~-~~~~~~~d~vi~~~~~~~~~~~~~~~l~~~G~~v~~~ 232 (271)
T cd05188 156 AAGARVIVTDRSDEKLELAK-ELGADHVIDYKEE-DLEEELR-LTGGGGADVVIDAVGGPETLAQALRLLRPGGRIVVVG 232 (271)
T ss_pred HcCCeEEEEcCCHHHHHHHH-HhCCceeccCCcC-CHHHHHH-HhcCCCCCEEEECCCCHHHHHHHHHhcccCCEEEEEc
Confidence 99999999999999989998 8998888888776 6666666 4444 89999999999 88899999999999999998
Q ss_pred eeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHH
Q 019332 253 MISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPH 300 (342)
Q Consensus 253 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 300 (342)
...... ........+.+++++.++.... ...+++++++
T Consensus 233 ~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~ 270 (271)
T cd05188 233 GTSGGP-----PLDDLRRLLFKELTIIGSTGGT-----REDFEEALDL 270 (271)
T ss_pred cCCCCC-----CcccHHHHHhcceEEEEeecCC-----HHHHHHHHhh
Confidence 755421 1122445677889888876654 3345554443
|
The medium chain reductase/dehydrogenases (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MDR group contains a host of activities, including the founding alcohol dehydrogenase (ADH) , quinone reductase, sorbitol dehydrogenase, formaldehyde dehydrogenase, butanediol DH, ketose reductase, cinnamyl reductase, and numerous others. The zinc-dependent alcohol dehydro |
| >cd08255 2-desacetyl-2-hydroxyethyl_bacteriochlorophyllide_like 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide and other MDR family members | Back alignment and domain information |
|---|
Probab=99.96 E-value=5.9e-28 Score=211.39 Aligned_cols=247 Identities=23% Similarity=0.264 Sum_probs=194.1
Q ss_pred cccCCCCCcccccEEEEEecCCCCCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh
Q 019332 68 VESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV 147 (342)
Q Consensus 68 ~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~ 147 (342)
++|.++|||++| +|+++|++++++++||+|++++.|++|+.++.+.++++ |++++.. +++.+ .+++|||+++. .
T Consensus 19 ~~p~v~g~e~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~~v~~~~~~~i-p~~l~~~-~aa~~-~~~~ta~~~~~-~ 92 (277)
T cd08255 19 PLPLPPGYSSVG--RVVEVGSGVTGFKPGDRVFCFGPHAERVVVPANLLVPL-PDGLPPE-RAALT-ALAATALNGVR-D 92 (277)
T ss_pred cCCcccCcceeE--EEEEeCCCCCCCCCCCEEEecCCcceEEEcCHHHeeEC-cCCCCHH-HhHHH-HHHHHHHHHHH-h
Confidence 378999999776 99999999999999999999999999999999999999 9985444 35566 78999999985 6
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcC-CCeeEecCCchhHHHHHHHHCCC-Ccc
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFG-FDEAFNYKEEPDLNEALKRYFPE-GID 224 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g-~~~v~~~~~~~~~~~~i~~~~~~-~~d 224 (342)
+++++++++||+| .|++|++++++|+..|++ |+++++++++.+.++ ++| ++.++++.+. .+.+ ++|
T Consensus 93 ~~~~~g~~vlI~g-~g~vg~~~i~~a~~~g~~~vi~~~~~~~~~~~~~-~~g~~~~~~~~~~~---------~~~~~~~d 161 (277)
T cd08255 93 AEPRLGERVAVVG-LGLVGLLAAQLAKAAGAREVVGVDPDAARRELAE-ALGPADPVAADTAD---------EIGGRGAD 161 (277)
T ss_pred cCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCCcEEEECCCHHHHHHHH-HcCCCccccccchh---------hhcCCCCC
Confidence 8899999999997 599999999999999998 999999999999888 888 4555443321 1233 799
Q ss_pred EEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc-------cchHHHHHH
Q 019332 225 IYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY-------HLYPKFLEM 296 (342)
Q Consensus 225 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~ 296 (342)
++|||++. ..+...+++++++|+++.+|..... . ......+..+.+++.+....... ....+.+++
T Consensus 162 ~vl~~~~~~~~~~~~~~~l~~~g~~~~~g~~~~~-~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 235 (277)
T cd08255 162 VVIEASGSPSALETALRLLRDRGRVVLVGWYGLK-P-----LLLGEEFHFKRLPIRSSQVYGIGRYDRPRRWTEARNLEE 235 (277)
T ss_pred EEEEccCChHHHHHHHHHhcCCcEEEEEeccCCC-c-----cccHHHHHhccCeEEeecccccccccccccccccccHHH
Confidence 99999886 7788999999999999999875432 0 11112233345566555443221 122367889
Q ss_pred HHHHHHcCCceeeeeeeeccccHHHHHHHHHcC-CccceEEE
Q 019332 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSG-RNVGKQVV 337 (342)
Q Consensus 297 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvv 337 (342)
+++++.++.+++.+...++++++.+|++.+.++ ....|+++
T Consensus 236 ~~~l~~~~~l~~~~~~~~~~~~~~~a~~~~~~~~~~~~k~~~ 277 (277)
T cd08255 236 ALDLLAEGRLEALITHRVPFEDAPEAYRLLFEDPPECLKVVL 277 (277)
T ss_pred HHHHHHcCCccccccCccCHHHHHHHHHHHHcCCccceeeeC
Confidence 999999999887777788999999999999877 34456653
|
This subgroup of the medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family has members identified as 2-desacetyl-2-hydroxyethyl bacteriochlorophyllide A dehydrogenase and alcohol dehydrogenases. The medium chain dehydrogenases/reductase (MDR)/zinc-dependent alcohol dehydrogenase-like family, which contains the zinc-dependent alcohol dehydrogenase (ADH-Zn) and related proteins, is a diverse group of proteins related to the first identified member, class I mammalian ADH. MDRs display a broad range of activities and are distinguished from the smaller short chain dehydrogenases (~ 250 amino acids vs. the ~ 350 amino acids of the MDR). The MDR proteins have 2 domains: a C-terminal NAD(P) binding-Rossmann fold domain of a beta-alpha form and an N-terminal catalytic domain with distant homology to GroES. The MD |
| >PF00107 ADH_zinc_N: Zinc-binding dehydrogenase; InterPro: IPR013149 Alcohol dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=99.79 E-value=2.8e-18 Score=132.50 Aligned_cols=127 Identities=27% Similarity=0.467 Sum_probs=113.8
Q ss_pred HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCC-hhhHHHHHHh
Q 019332 164 AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVG-GKMLDAVLLN 241 (342)
Q Consensus 164 ~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g-~~~~~~~~~~ 241 (342)
++|++++|+|+..|++|++++++++|+++++ ++|++.++++++. ++.+++++.+++ ++|++|||+| ...++.++++
T Consensus 1 ~vG~~a~q~ak~~G~~vi~~~~~~~k~~~~~-~~Ga~~~~~~~~~-~~~~~i~~~~~~~~~d~vid~~g~~~~~~~~~~~ 78 (130)
T PF00107_consen 1 GVGLMAIQLAKAMGAKVIATDRSEEKLELAK-ELGADHVIDYSDD-DFVEQIRELTGGRGVDVVIDCVGSGDTLQEAIKL 78 (130)
T ss_dssp HHHHHHHHHHHHTTSEEEEEESSHHHHHHHH-HTTESEEEETTTS-SHHHHHHHHTTTSSEEEEEESSSSHHHHHHHHHH
T ss_pred ChHHHHHHHHHHcCCEEEEEECCHHHHHHHH-hhccccccccccc-ccccccccccccccceEEEEecCcHHHHHHHHHH
Confidence 6899999999999999999999999999999 9999999999998 899999999998 9999999999 5899999999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHH
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIK 302 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 302 (342)
++++|+++.+|...+. ....+...++.+++++.+++... .+.++++++++.
T Consensus 79 l~~~G~~v~vg~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~~la 129 (130)
T PF00107_consen 79 LRPGGRIVVVGVYGGD-----PISFNLMNLMFKEITIRGSWGGS-----PEDFQEALQLLA 129 (130)
T ss_dssp EEEEEEEEEESSTSTS-----EEEEEHHHHHHTTEEEEEESSGG-----HHHHHHHHHHHH
T ss_pred hccCCEEEEEEccCCC-----CCCCCHHHHHhCCcEEEEEccCC-----HHHHHHHHHHhc
Confidence 9999999999987632 44667888999999999998877 566677776664
|
1.1.1 from EC) (ADH) catalyzes the reversible oxidation of alcohols to their corresponding acetaldehyde or ketone with the concomitant reduction of NAD: |
| >PF08240 ADH_N: Alcohol dehydrogenase GroES-like domain; InterPro: IPR013154 This is the catalytic domain of alcohol dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=99.70 E-value=1.9e-17 Score=123.37 Aligned_cols=78 Identities=22% Similarity=0.119 Sum_probs=65.8
Q ss_pred CCcEEEEEEeeecCcccccccccC-CCCccccCCCCCcccccEEEEEecCCCCCCCCCCEEEec----------------
Q 019332 40 SNGVLLKNLYLSCDPYMRPRMTNI-KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM---------------- 102 (342)
Q Consensus 40 ~~~VlIkv~~~~i~~~d~~~~~~~-~~~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~---------------- 102 (342)
|+||||||.++|||++|++.+.+. .....+|.++|||++| +|+++|+++++|++||+|++.
T Consensus 1 P~eVlVkv~a~gic~~D~~~~~g~~~~~~~~p~i~GhE~~G--~V~~vG~~v~~~~~Gd~V~~~~~~~~~~c~~c~~~~~ 78 (109)
T PF08240_consen 1 PGEVLVKVRAAGICGSDLHIREGGPPPPPKFPLILGHEGVG--VVVAVGPGVTDFKVGDRVVVSPNIGCGECEYCLSGRP 78 (109)
T ss_dssp TTEEEEEEEEEEE-HHHHHHHTTSSSSTSSSSEES-SEEEE--EEEEESTTTTSSGTT-EEEEESEEETSSSHHHHTTTG
T ss_pred CCEEEEEEEEeeeCHHHHHHHhhccccCCCCCcccccceee--eeeeeccccccccccceeeeecccCccCchhhcCCcc
Confidence 689999999999999999999984 4556789999999776 999999999999999999863
Q ss_pred --------------cccceeEeecCCcceee
Q 019332 103 --------------TGWEEYSLVTAPQLFKI 119 (342)
Q Consensus 103 --------------g~~~~~~~v~~~~~~~i 119 (342)
|+|+||+.++++.++++
T Consensus 79 ~~c~~~~~~g~~~~G~~aey~~v~~~~~~~v 109 (109)
T PF08240_consen 79 NLCPNPEVLGLGLDGGFAEYVVVPARNLVPV 109 (109)
T ss_dssp GGTTTBEETTTSSTCSSBSEEEEEGGGEEEE
T ss_pred ccCCCCCEeEcCCCCcccCeEEEehHHEEEC
Confidence 68888888888888775
|
1.1.1 from EC). Many of them contain an inserted zinc binding domain. This domain has a GroES-like structure; a name derived from the superfamily of proteins with a GroES fold. Proteins with a GroES fold structure have a highly conserved hydrophobic core and a glycyl-aspartate dipeptide which is thought to maintain the fold [, ].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1YKF_D 2NVB_A 3FSR_D 1BXZ_B 3FTN_A 3MEQ_D 3UOG_B 3HZZ_B 4DVJ_A 1P0F_A .... |
| >PF13602 ADH_zinc_N_2: Zinc-binding dehydrogenase; PDB: 3TQH_A 2VN8_A 3GOH_A 4A27_A | Back alignment and domain information |
|---|
Probab=99.57 E-value=3.6e-15 Score=114.52 Aligned_cols=123 Identities=29% Similarity=0.384 Sum_probs=80.4
Q ss_pred cCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC--hh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHh
Q 019332 197 FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG--GK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVT 273 (342)
Q Consensus 197 ~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g--~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~ 273 (342)
||+++++||+.. ++ ...+++|+|||++| ++ .+..++++| ++|+++.++. .. .........
T Consensus 1 LGAd~vidy~~~-~~------~~~~~~D~ViD~~g~~~~~~~~~~~~~l-~~G~~v~i~~-~~--------~~~~~~~~~ 63 (127)
T PF13602_consen 1 LGADEVIDYRDT-DF------AGPGGVDVVIDTVGQTGESLLDASRKLL-PGGRVVSIGG-DL--------PSFARRLKG 63 (127)
T ss_dssp CT-SEEEETTCS-HH------HTTS-EEEEEESS-CCHHHCGGGCCCTE-EEEEEEEE-S-HH--------HHHHHHHHC
T ss_pred CCcCEEecCCCc-cc------cCCCCceEEEECCCCccHHHHHHHHHHC-CCCEEEEECC-cc--------cchhhhhcc
Confidence 689999999976 66 33348999999999 74 447788889 9999999874 00 001110111
Q ss_pred cceeeecce-ecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEE
Q 019332 274 KRVRMEGFL-VRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337 (342)
Q Consensus 274 ~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv 337 (342)
...++.... +... ....+.++++.+++.+|++++.+..+|||+++.+|++.+++++..||+||
T Consensus 64 ~~~~~~~~~~~~~~-~~~~~~l~~l~~l~~~G~l~~~i~~~f~l~~~~~A~~~l~~~~~~GKvVl 127 (127)
T PF13602_consen 64 RSIRYSFLFSVDPN-AIRAEALEELAELVAEGKLKPPIDRVFPLEEAPEAHERLESGHARGKVVL 127 (127)
T ss_dssp HHCEEECCC-H--H-HHHHHHHHHHHHHHHTTSS---EEEEEEGGGHHHHHHHHHCT--SSEEEE
T ss_pred cceEEEEEEecCCC-chHHHHHHHHHHHHHCCCeEEeeccEECHHHHHHHHHHHHhCCCCCeEeC
Confidence 122222111 0000 22456799999999999999999999999999999999999999999997
|
|
| >cd00401 AdoHcyase S-adenosyl-L-homocysteine hydrolase (AdoHycase) catalyzes the hydrolysis of S-adenosyl-L-homocysteine (AdoHyc) to form adenosine (Ado) and homocysteine (Hcy) | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.2e-11 Score=109.06 Aligned_cols=175 Identities=14% Similarity=0.078 Sum_probs=125.8
Q ss_pred HHHhhhhhcC-CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHH
Q 019332 140 AYAGFYEVCS-PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 140 a~~al~~~~~-~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 218 (342)
.+.++.+..+ ..+|++|+|.|+ |.+|+.+++.++..|++|+++..++.|.+.++ .+|++.+ + ..+.+
T Consensus 188 ~~~~i~r~t~~~l~GktVvViG~-G~IG~~va~~ak~~Ga~ViV~d~d~~R~~~A~-~~G~~~~-~------~~e~v--- 255 (413)
T cd00401 188 LIDGIKRATDVMIAGKVAVVAGY-GDVGKGCAQSLRGQGARVIVTEVDPICALQAA-MEGYEVM-T------MEEAV--- 255 (413)
T ss_pred hHHHHHHhcCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEECChhhHHHHH-hcCCEEc-c------HHHHH---
Confidence 4555545433 468999999997 99999999999999999999999999988888 8998432 1 22222
Q ss_pred CCCCccEEEeCCCh-hhHHHH-HHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHH-
Q 019332 219 FPEGIDIYFENVGG-KMLDAV-LLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLE- 295 (342)
Q Consensus 219 ~~~~~d~vid~~g~-~~~~~~-~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 295 (342)
.++|++++|.|. ..+... +++++++|+++.+|.. ....+...+..+++++.+...... ...++
T Consensus 256 --~~aDVVI~atG~~~~i~~~~l~~mk~GgilvnvG~~--------~~eId~~~L~~~el~i~g~~~~~~----~~~~~~ 321 (413)
T cd00401 256 --KEGDIFVTTTGNKDIITGEHFEQMKDGAIVCNIGHF--------DVEIDVKGLKENAVEVVNIKPQVD----RYELPD 321 (413)
T ss_pred --cCCCEEEECCCCHHHHHHHHHhcCCCCcEEEEeCCC--------CCccCHHHHHhhccEEEEccCCcc----eEEcCC
Confidence 248999999998 556665 9999999999999853 123566667777888777644320 01233
Q ss_pred -HHHHHHHcCCc-eee--eeee-----eccc-cHHHHHHHHHcCCcc-ceEEEEec
Q 019332 296 -MIIPHIKEGKI-VYV--EDMA-----EGLE-SAPATLIGLFSGRNV-GKQVVAVA 340 (342)
Q Consensus 296 -~~~~~~~~g~~-~~~--~~~~-----~~l~-~~~~a~~~~~~~~~~-gkvvv~~~ 340 (342)
..+.++.+|.+ ... +... ++|+ ++.++++.+.++... -|+++.++
T Consensus 322 g~aI~LLa~Grlvnl~~~~gH~~~vmd~sf~~q~l~a~~l~~~~~~~~~kV~~~p~ 377 (413)
T cd00401 322 GRRIILLAEGRLVNLGCATGHPSFVMSNSFTNQVLAQIELWTNRDKYEVGVYFLPK 377 (413)
T ss_pred cchhhhhhCcCCCCCcccCCCccceechhHHHHHHHHHHHHhcCCcCCCcEEECCH
Confidence 57889999988 432 2222 4688 999999988876532 46666543
|
The equilibrium lies far on the side of AdoHyc synthesis, but in nature the removal of Ado and Hyc is sufficiently fast, so that the net reaction is in the direction of hydrolysis. Since AdoHyc is a potent inhibitor of S-adenosyl-L-methionine dependent methyltransferases, AdoHycase plays a critical role in the modulation of the activity of various methyltransferases. The enzyme forms homooligomers of 45-50kDa subunits, each binding one molecule of NAD+. |
| >PRK09424 pntA NAD(P) transhydrogenase subunit alpha; Provisional | Back alignment and domain information |
|---|
Probab=99.33 E-value=3.5e-11 Score=111.48 Aligned_cols=150 Identities=15% Similarity=0.081 Sum_probs=105.8
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCc------------hhHHHHHH
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEE------------PDLNEALK 216 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~------------~~~~~~i~ 216 (342)
..++++|+|.|+ |.+|+++++.|+.+|++|++++.++++++.++ ++|++.+ +|..+. .++.+..+
T Consensus 162 ~~pg~kVlViGa-G~iGL~Ai~~Ak~lGA~V~a~D~~~~rle~ae-slGA~~v~i~~~e~~~~~~gya~~~s~~~~~~~~ 239 (509)
T PRK09424 162 KVPPAKVLVIGA-GVAGLAAIGAAGSLGAIVRAFDTRPEVAEQVE-SMGAEFLELDFEEEGGSGDGYAKVMSEEFIKAEM 239 (509)
T ss_pred CcCCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEEeccccccccccchhhhcchhHHHHHH
Confidence 467999999997 99999999999999999999999999999999 9999743 554331 02333333
Q ss_pred HH-CC--CCccEEEeCCChh------h-HHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHh-cceeeecceecc
Q 019332 217 RY-FP--EGIDIYFENVGGK------M-LDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVT-KRVRMEGFLVRD 285 (342)
Q Consensus 217 ~~-~~--~~~d~vid~~g~~------~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~ 285 (342)
+. .+ +++|++|+|+|.+ . .+..++.++++|++++++...+.+.. .......++. +++++.|....
T Consensus 240 ~~~~~~~~gaDVVIetag~pg~~aP~lit~~~v~~mkpGgvIVdvg~~~GG~~e---~t~~~~~v~~~~gVti~Gv~n~- 315 (509)
T PRK09424 240 ALFAEQAKEVDIIITTALIPGKPAPKLITAEMVASMKPGSVIVDLAAENGGNCE---LTVPGEVVVTDNGVTIIGYTDL- 315 (509)
T ss_pred HHHHhccCCCCEEEECCCCCcccCcchHHHHHHHhcCCCCEEEEEccCCCCCcc---cccCccceEeECCEEEEEeCCC-
Confidence 32 22 2699999999962 3 48999999999999999985433211 1112233444 78888875421
Q ss_pred cccchHHHHHHHHHHHHcCCceee
Q 019332 286 YYHLYPKFLEMIIPHIKEGKIVYV 309 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~~~~~ 309 (342)
+ .++-....+++.++.+...
T Consensus 316 -P---~~~p~~As~lla~~~i~l~ 335 (509)
T PRK09424 316 -P---SRLPTQSSQLYGTNLVNLL 335 (509)
T ss_pred -c---hhHHHHHHHHHHhCCccHH
Confidence 2 2333346777777776543
|
|
| >PF11017 DUF2855: Protein of unknown function (DUF2855); InterPro: IPR021276 This family of proteins has no known function | Back alignment and domain information |
|---|
Probab=98.76 E-value=5.9e-07 Score=77.83 Aligned_cols=168 Identities=15% Similarity=0.169 Sum_probs=106.7
Q ss_pred cEEEEEecCCCCCCCCCCEEEeccccceeEeecCCccee----------------------ecCCCC-Cccch-hhccCC
Q 019332 80 YGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFK----------------------IQHTDV-PLSYY-TGILGM 135 (342)
Q Consensus 80 ~g~v~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~----------------------i~p~~~-~~~~~-~a~l~~ 135 (342)
+|..+++.|+++++.+|+||+|+=..++|..+.+..+-+ +.++.. +...+ .-++..
T Consensus 36 WGfA~VveS~~~~i~vGerlyGy~P~ashl~l~p~~v~~~~f~d~s~hR~~l~~~YN~Y~r~~~d~~y~~~~e~~~~Llr 115 (314)
T PF11017_consen 36 WGFATVVESRHPGIAVGERLYGYFPMASHLVLEPGKVSPGGFRDVSPHRAGLPPIYNQYLRVSADPAYDPEREDWQMLLR 115 (314)
T ss_pred ceEEEEEeeCCCCccCccEEEeeccccceeEEeccccCCCccccChhhhCcCchhhhceeecCCCcccCcchhHHHHHHH
Confidence 457788899999999999999985555555554443210 000000 00111 223333
Q ss_pred chhhHHHhhhhhc---CCCCCCEEEEecCCcHHHHHHHHHHH-HcC-CEEEEEeCChhhHHHHHHHcCC-CeeEecCCch
Q 019332 136 PGMTAYAGFYEVC---SPKQGECVFISAASGAVGQLVGQFAK-LLG-CYVVGSAGSKDKIDLLKNKFGF-DEAFNYKEEP 209 (342)
Q Consensus 136 ~~~ta~~al~~~~---~~~~~~~vlI~ga~g~vG~~ai~la~-~~g-a~Vi~~~~s~~~~~~~~~~~g~-~~v~~~~~~~ 209 (342)
++...-+.|.+.. +.-..+.|+|.+||+-+++.++.+++ ..+ .+++.+++..++ .+.+ ++|+ +.++.|++
T Consensus 116 PLf~Tsfll~d~l~~~~~~ga~~vvl~SASSKTA~glA~~L~~~~~~~~~vglTS~~N~-~Fve-~lg~Yd~V~~Yd~-- 191 (314)
T PF11017_consen 116 PLFITSFLLDDFLFDNDFFGAAQVVLSSASSKTAIGLAYCLKKQRGPPKVVGLTSARNV-AFVE-SLGCYDEVLTYDD-- 191 (314)
T ss_pred HHHHHHHHHHHHhcccccCCccEEEEeccchHHHHHHHHHhhccCCCceEEEEecCcch-hhhh-ccCCceEEeehhh--
Confidence 4333333443321 22344789999999999999888888 444 499999966665 6887 9998 88888854
Q ss_pred hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCC-EEEEEceecc
Q 019332 210 DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHG-RIAVCGMISQ 256 (342)
Q Consensus 210 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G-~~v~~g~~~~ 256 (342)
|..+....--+++|+.|. +....+...++..= ..+.+|...-
T Consensus 192 -----i~~l~~~~~~v~VDfaG~~~~~~~Lh~~l~d~l~~~~~VG~th~ 235 (314)
T PF11017_consen 192 -----IDSLDAPQPVVIVDFAGNGEVLAALHEHLGDNLVYSCLVGATHW 235 (314)
T ss_pred -----hhhccCCCCEEEEECCCCHHHHHHHHHHHhhhhhEEEEEEccCc
Confidence 333322346789999999 66677777777753 4566665443
|
|
| >TIGR00561 pntA NAD(P) transhydrogenase, alpha subunit | Back alignment and domain information |
|---|
Probab=98.51 E-value=1e-06 Score=81.83 Aligned_cols=107 Identities=20% Similarity=0.220 Sum_probs=80.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCc------------hhHHHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEE------------PDLNEALKR 217 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~------------~~~~~~i~~ 217 (342)
.++++|+|.|+ |.+|++++++++.+|++|++.+.++++++.++ ++|++. .++..+. .++.+...+
T Consensus 162 vp~akVlViGa-G~iGl~Aa~~ak~lGA~V~v~d~~~~rle~a~-~lGa~~v~v~~~e~g~~~~gYa~~~s~~~~~~~~~ 239 (511)
T TIGR00561 162 VPPAKVLVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEGGSGDGYAKVMSEEFIAAEME 239 (511)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccccceeecCHHHHHHHHH
Confidence 45789999997 99999999999999999999999999999998 899864 2332110 123333333
Q ss_pred HCC---CCccEEEeCC---Ch-h---hHHHHHHhhhhCCEEEEEceeccccC
Q 019332 218 YFP---EGIDIYFENV---GG-K---MLDAVLLNMKIHGRIAVCGMISQYNL 259 (342)
Q Consensus 218 ~~~---~~~d~vid~~---g~-~---~~~~~~~~l~~~G~~v~~g~~~~~~~ 259 (342)
... .++|++|+|+ |. . ..+...+.+++++.+++++...+.+.
T Consensus 240 ~~~e~~~~~DIVI~TalipG~~aP~Lit~emv~~MKpGsvIVDlA~d~GGn~ 291 (511)
T TIGR00561 240 LFAAQAKEVDIIITTALIPGKPAPKLITEEMVDSMKAGSVIVDLAAEQGGNC 291 (511)
T ss_pred HHHHHhCCCCEEEECcccCCCCCCeeehHHHHhhCCCCCEEEEeeeCCCCCE
Confidence 332 2699999999 65 2 46778999999999999987555433
|
In some species, such as Rhodospirillum rubrum, the alpha chain is replaced by two shorter chains, both with some homology to the full-length alpha chain modeled here. These score below the trusted cutoff. |
| >COG4221 Short-chain alcohol dehydrogenase of unknown specificity [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.42 E-value=1.7e-06 Score=71.60 Aligned_cols=81 Identities=23% Similarity=0.381 Sum_probs=63.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----CeeEecCCchhHHHHHHHHCCC--CccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----DEAFNYKEEPDLNEALKRYFPE--GIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~~--~~d~ 225 (342)
.+..++|+||++|+|.+.++.....|++|+.+.|+.++++.+.++++. ...+|-.+.......+..+... .+|+
T Consensus 5 ~~kv~lITGASSGiG~A~A~~l~~~G~~vvl~aRR~drL~~la~~~~~~~~~~~~~DVtD~~~~~~~i~~~~~~~g~iDi 84 (246)
T COG4221 5 KGKVALITGASSGIGEATARALAEAGAKVVLAARREERLEALADEIGAGAALALALDVTDRAAVEAAIEALPEEFGRIDI 84 (246)
T ss_pred CCcEEEEecCcchHHHHHHHHHHHCCCeEEEEeccHHHHHHHHHhhccCceEEEeeccCCHHHHHHHHHHHHHhhCcccE
Confidence 347899999999999999999999999999999999999998878883 2345655542444445444433 5999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++|.+|-
T Consensus 85 LvNNAGl 91 (246)
T COG4221 85 LVNNAGL 91 (246)
T ss_pred EEecCCC
Confidence 9999983
|
|
| >PRK11873 arsM arsenite S-adenosylmethyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=98.37 E-value=4.2e-06 Score=72.97 Aligned_cols=168 Identities=16% Similarity=0.203 Sum_probs=98.8
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC--C
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF--P 220 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~--~ 220 (342)
+.++++++||.+|. |+ |..++++++..|. +|++++.+++..+.+++. .+...+ ..... ++ .++. .
T Consensus 73 ~~~~~g~~VLDiG~-G~-G~~~~~~a~~~g~~~~v~gvD~s~~~l~~A~~~~~~~g~~~v-~~~~~-d~----~~l~~~~ 144 (272)
T PRK11873 73 AELKPGETVLDLGS-GG-GFDCFLAARRVGPTGKVIGVDMTPEMLAKARANARKAGYTNV-EFRLG-EI----EALPVAD 144 (272)
T ss_pred ccCCCCCEEEEeCC-CC-CHHHHHHHHHhCCCCEEEEECCCHHHHHHHHHHHHHcCCCCE-EEEEc-ch----hhCCCCC
Confidence 56889999999995 55 8888888887765 799999999988887732 333322 22111 22 2222 3
Q ss_pred CCccEEEeCC------Ch-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHH
Q 019332 221 EGIDIYFENV------GG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293 (342)
Q Consensus 221 ~~~d~vid~~------g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
+.+|+|+... .. ..+..+.++|+++|+++..+......+ . ..+.+...+.+..... ...
T Consensus 145 ~~fD~Vi~~~v~~~~~d~~~~l~~~~r~LkpGG~l~i~~~~~~~~~-------~--~~~~~~~~~~~~~~~~-----~~~ 210 (272)
T PRK11873 145 NSVDVIISNCVINLSPDKERVFKEAFRVLKPGGRFAISDVVLRGEL-------P--EEIRNDAELYAGCVAG-----ALQ 210 (272)
T ss_pred CceeEEEEcCcccCCCCHHHHHHHHHHHcCCCcEEEEEEeeccCCC-------C--HHHHHhHHHHhccccC-----CCC
Confidence 3799988543 22 578899999999999998766433211 0 1111111111111111 011
Q ss_pred HHHHHHHHHc-CCce--eeeeeeeccccHHHHHHHH--HcCCccceEEE
Q 019332 294 LEMIIPHIKE-GKIV--YVEDMAEGLESAPATLIGL--FSGRNVGKQVV 337 (342)
Q Consensus 294 ~~~~~~~~~~-g~~~--~~~~~~~~l~~~~~a~~~~--~~~~~~gkvvv 337 (342)
.+++.+++.+ |-.. ......++++++.++++.+ ..++..++.+.
T Consensus 211 ~~e~~~~l~~aGf~~v~i~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~ 259 (272)
T PRK11873 211 EEEYLAMLAEAGFVDITIQPKREYRIPDAREFLEDWGIAPGRQLDGYIV 259 (272)
T ss_pred HHHHHHHHHHCCCCceEEEeccceecccHHHHHHHhccccccccCceEE
Confidence 2344555555 3222 3334456888999999988 55555555554
|
|
| >PRK05476 S-adenosyl-L-homocysteine hydrolase; Provisional | Back alignment and domain information |
|---|
Probab=98.33 E-value=6.7e-06 Score=75.06 Aligned_cols=103 Identities=20% Similarity=0.211 Sum_probs=77.7
Q ss_pred hHHHhhhhhcCCC-CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHH
Q 019332 139 TAYAGFYEVCSPK-QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKR 217 (342)
Q Consensus 139 ta~~al~~~~~~~-~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~ 217 (342)
.+|.++.+..++. .|++|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+. +. ++.+.++
T Consensus 197 s~~~ai~rat~~~l~Gk~VlViG~-G~IG~~vA~~lr~~Ga~ViV~d~dp~ra~~A~-~~G~~-v~------~l~eal~- 266 (425)
T PRK05476 197 SLLDGIKRATNVLIAGKVVVVAGY-GDVGKGCAQRLRGLGARVIVTEVDPICALQAA-MDGFR-VM------TMEEAAE- 266 (425)
T ss_pred hhHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCchhhHHHH-hcCCE-ec------CHHHHHh-
Confidence 3455554443544 8999999996 99999999999999999999998888766655 55653 22 2222222
Q ss_pred HCCCCccEEEeCCCh-hhHH-HHHHhhhhCCEEEEEceec
Q 019332 218 YFPEGIDIYFENVGG-KMLD-AVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 218 ~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~~ 255 (342)
++|++++|.|. ..+. ..+..+++++.+++.|...
T Consensus 267 ----~aDVVI~aTG~~~vI~~~~~~~mK~GailiNvG~~d 302 (425)
T PRK05476 267 ----LGDIFVTATGNKDVITAEHMEAMKDGAILANIGHFD 302 (425)
T ss_pred ----CCCEEEECCCCHHHHHHHHHhcCCCCCEEEEcCCCC
Confidence 48999999998 4555 6788999999999998754
|
|
| >COG3967 DltE Short-chain dehydrogenase involved in D-alanine esterification of lipoteichoic acid and wall teichoic acid (D-alanine transfer protein) [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=98.29 E-value=5.5e-06 Score=66.42 Aligned_cols=78 Identities=21% Similarity=0.364 Sum_probs=59.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--CeeEecCCchh----HHHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--DEAFNYKEEPD----LNEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~----~~~~i~~~~~~~~d~ 225 (342)
.|.+|||+|+++|||++.++-...+|-+||+..|++++++.++..... ..+.|-.+. + +.+++++..+ ..++
T Consensus 4 tgnTiLITGG~sGIGl~lak~f~elgN~VIi~gR~e~~L~e~~~~~p~~~t~v~Dv~d~-~~~~~lvewLkk~~P-~lNv 81 (245)
T COG3967 4 TGNTILITGGASGIGLALAKRFLELGNTVIICGRNEERLAEAKAENPEIHTEVCDVADR-DSRRELVEWLKKEYP-NLNV 81 (245)
T ss_pred cCcEEEEeCCcchhhHHHHHHHHHhCCEEEEecCcHHHHHHHHhcCcchheeeecccch-hhHHHHHHHHHhhCC-chhe
Confidence 467999999999999999999999999999999999999998843322 234454443 3 4444444333 4899
Q ss_pred EEeCCC
Q 019332 226 YFENVG 231 (342)
Q Consensus 226 vid~~g 231 (342)
++|++|
T Consensus 82 liNNAG 87 (245)
T COG3967 82 LINNAG 87 (245)
T ss_pred eeeccc
Confidence 999998
|
|
| >COG0300 DltE Short-chain dehydrogenases of various substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=98.25 E-value=6.8e-06 Score=69.93 Aligned_cols=81 Identities=21% Similarity=0.285 Sum_probs=61.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-----e--eEecCCchhHHHHHHH-HCC-C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-----E--AFNYKEEPDLNEALKR-YFP-E 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-----~--v~~~~~~~~~~~~i~~-~~~-~ 221 (342)
..+.++||+|||+|||...+..+...|.+|+.++|+++|++.+.+++.-. + .+|..+. +-.+.+.+ +.. +
T Consensus 4 ~~~~~~lITGASsGIG~~~A~~lA~~g~~liLvaR~~~kL~~la~~l~~~~~v~v~vi~~DLs~~-~~~~~l~~~l~~~~ 82 (265)
T COG0300 4 MKGKTALITGASSGIGAELAKQLARRGYNLILVARREDKLEALAKELEDKTGVEVEVIPADLSDP-EALERLEDELKERG 82 (265)
T ss_pred CCCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHHHHHhhCceEEEEECcCCCh-hHHHHHHHHHHhcC
Confidence 46789999999999999999999999999999999999998777555421 1 2465565 33334333 222 2
Q ss_pred -CccEEEeCCCh
Q 019332 222 -GIDIYFENVGG 232 (342)
Q Consensus 222 -~~d~vid~~g~ 232 (342)
.+|+.+|++|-
T Consensus 83 ~~IdvLVNNAG~ 94 (265)
T COG0300 83 GPIDVLVNNAGF 94 (265)
T ss_pred CcccEEEECCCc
Confidence 69999999994
|
|
| >TIGR00936 ahcY adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.24 E-value=1.7e-05 Score=71.97 Aligned_cols=101 Identities=21% Similarity=0.236 Sum_probs=76.2
Q ss_pred HHHhhhhhcC-CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHH
Q 019332 140 AYAGFYEVCS-PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 140 a~~al~~~~~-~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 218 (342)
++.++.+..+ ...|++|+|.|. |.+|..+++.++.+|++|+++..++.+...+. ..|+ .+. +..+.++
T Consensus 181 ~~~~i~r~t~~~l~Gk~VvViG~-G~IG~~vA~~ak~~Ga~ViV~d~dp~r~~~A~-~~G~-~v~------~leeal~-- 249 (406)
T TIGR00936 181 TIDGILRATNLLIAGKTVVVAGY-GWCGKGIAMRARGMGARVIVTEVDPIRALEAA-MDGF-RVM------TMEEAAK-- 249 (406)
T ss_pred HHHHHHHhcCCCCCcCEEEEECC-CHHHHHHHHHHhhCcCEEEEEeCChhhHHHHH-hcCC-EeC------CHHHHHh--
Confidence 4444444433 468999999996 99999999999999999999988887766666 6676 222 2222222
Q ss_pred CCCCccEEEeCCCh-hhHH-HHHHhhhhCCEEEEEcee
Q 019332 219 FPEGIDIYFENVGG-KMLD-AVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 219 ~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~ 254 (342)
+.|++|++.|. ..+. ..+..+++++.++.+|..
T Consensus 250 ---~aDVVItaTG~~~vI~~~~~~~mK~GailiN~G~~ 284 (406)
T TIGR00936 250 ---IGDIFITATGNKDVIRGEHFENMKDGAIVANIGHF 284 (406)
T ss_pred ---cCCEEEECCCCHHHHHHHHHhcCCCCcEEEEECCC
Confidence 47999999998 4555 488899999999999875
|
This enzyme hydrolyzes adenosylhomocysteine as part of a cycle for the regeneration of the methyl donor S-adenosylmethionine. Species that lack this enzyme are likely to have adenosylhomocysteine nucleosidase (EC 3.2.2.9), an enzyme which also acts as 5'-methyladenosine nucleosidase (see TIGR01704). |
| >PRK08324 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.22 E-value=1.6e-05 Score=78.35 Aligned_cols=141 Identities=18% Similarity=0.226 Sum_probs=89.6
Q ss_pred cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEE
Q 019332 103 TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVG 182 (342)
Q Consensus 103 g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~ 182 (342)
-++++|..++...++.+ +. +..+.+.+.. . ...+..+|.++||+|++|++|.++++.+...|++|++
T Consensus 385 ~~~~~~~~l~~~~~f~i--~~--~~~e~a~l~~--------~-~~~~~l~gk~vLVTGasggIG~~la~~L~~~Ga~Vvl 451 (681)
T PRK08324 385 EAVGRYEPLSEQEAFDI--EY--WSLEQAKLQR--------M-PKPKPLAGKVALVTGAAGGIGKATAKRLAAEGACVVL 451 (681)
T ss_pred hhcCCccCCChhhhcce--ee--ehhhhhhhhc--------C-CCCcCCCCCEEEEecCCCHHHHHHHHHHHHCcCEEEE
Confidence 36778888887777776 33 3332221100 0 0122346789999999999999999999999999999
Q ss_pred EeCChhhHHHHHHHcCC-----CeeEecCCchhHHHHHHHHC--CCCccEEEeCCCh-----------------------
Q 019332 183 SAGSKDKIDLLKNKFGF-----DEAFNYKEEPDLNEALKRYF--PEGIDIYFENVGG----------------------- 232 (342)
Q Consensus 183 ~~~s~~~~~~~~~~~g~-----~~v~~~~~~~~~~~~i~~~~--~~~~d~vid~~g~----------------------- 232 (342)
++++.++.+.+.+.++. ....|..+...+.+.+.+.. .+++|++|+++|.
T Consensus 452 ~~r~~~~~~~~~~~l~~~~~v~~v~~Dvtd~~~v~~~~~~~~~~~g~iDvvI~~AG~~~~~~~~~~~~~~~~~~~~~N~~ 531 (681)
T PRK08324 452 ADLDEEAAEAAAAELGGPDRALGVACDVTDEAAVQAAFEEAALAFGGVDIVVSNAGIAISGPIEETSDEDWRRSFDVNAT 531 (681)
T ss_pred EeCCHHHHHHHHHHHhccCcEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhH
Confidence 99998877665534543 11234444312333333322 2369999999982
Q ss_pred ---hhHHHHHHhhhh---CCEEEEEceecc
Q 019332 233 ---KMLDAVLLNMKI---HGRIAVCGMISQ 256 (342)
Q Consensus 233 ---~~~~~~~~~l~~---~G~~v~~g~~~~ 256 (342)
..++.+++.+++ +|+++.+++...
T Consensus 532 g~~~l~~~~~~~l~~~~~~g~iV~vsS~~~ 561 (681)
T PRK08324 532 GHFLVAREAVRIMKAQGLGGSIVFIASKNA 561 (681)
T ss_pred HHHHHHHHHHHHHHhcCCCcEEEEECCccc
Confidence 113344556666 589999887544
|
|
| >PLN02494 adenosylhomocysteinase | Back alignment and domain information |
|---|
Probab=98.19 E-value=2.3e-05 Score=71.87 Aligned_cols=100 Identities=18% Similarity=0.216 Sum_probs=77.1
Q ss_pred HHhhhhhcCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC
Q 019332 141 YAGFYEVCSP-KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 141 ~~al~~~~~~-~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
+.++.+..++ -.|++|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+.. + ++.+.++
T Consensus 241 ~d~i~r~t~i~LaGKtVvViGy-G~IGr~vA~~aka~Ga~VIV~e~dp~r~~eA~-~~G~~v-v------~leEal~--- 308 (477)
T PLN02494 241 PDGLMRATDVMIAGKVAVICGY-GDVGKGCAAAMKAAGARVIVTEIDPICALQAL-MEGYQV-L------TLEDVVS--- 308 (477)
T ss_pred HHHHHHhcCCccCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhhHHHH-hcCCee-c------cHHHHHh---
Confidence 5555454443 67999999996 99999999999999999999998887765665 667642 2 2223332
Q ss_pred CCCccEEEeCCChh-h-HHHHHHhhhhCCEEEEEcee
Q 019332 220 PEGIDIYFENVGGK-M-LDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 220 ~~~~d~vid~~g~~-~-~~~~~~~l~~~G~~v~~g~~ 254 (342)
..|+++++.|.. . ....++.+++++.++.+|..
T Consensus 309 --~ADVVI~tTGt~~vI~~e~L~~MK~GAiLiNvGr~ 343 (477)
T PLN02494 309 --EADIFVTTTGNKDIIMVDHMRKMKNNAIVCNIGHF 343 (477)
T ss_pred --hCCEEEECCCCccchHHHHHhcCCCCCEEEEcCCC
Confidence 379999999984 3 47899999999999999874
|
|
| >PRK08306 dipicolinate synthase subunit A; Reviewed | Back alignment and domain information |
|---|
Probab=98.17 E-value=4.9e-05 Score=66.79 Aligned_cols=94 Identities=22% Similarity=0.326 Sum_probs=73.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.+++|.|. |.+|+.+++.++.+|++|++..++.++.+.++ ++|+.. +.+ . ++.+.+. ++|+||+|+.
T Consensus 151 ~g~kvlViG~-G~iG~~~a~~L~~~Ga~V~v~~r~~~~~~~~~-~~G~~~-~~~--~-~l~~~l~-----~aDiVI~t~p 219 (296)
T PRK08306 151 HGSNVLVLGF-GRTGMTLARTLKALGANVTVGARKSAHLARIT-EMGLSP-FHL--S-ELAEEVG-----KIDIIFNTIP 219 (296)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCee-ecH--H-HHHHHhC-----CCCEEEECCC
Confidence 5889999997 99999999999999999999999988888887 788643 222 1 2222222 4999999988
Q ss_pred hh-hHHHHHHhhhhCCEEEEEceecc
Q 019332 232 GK-MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 232 ~~-~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.. .....++.+++++.+++++...+
T Consensus 220 ~~~i~~~~l~~~~~g~vIIDla~~pg 245 (296)
T PRK08306 220 ALVLTKEVLSKMPPEALIIDLASKPG 245 (296)
T ss_pred hhhhhHHHHHcCCCCcEEEEEccCCC
Confidence 64 34567788999999998887544
|
|
| >PRK05786 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=98.08 E-value=4.4e-05 Score=64.98 Aligned_cols=105 Identities=21% Similarity=0.210 Sum_probs=70.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC---Cee--EecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF---DEA--FNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+++|+|+|++|++|..+++.+...|++|+.+++++++.+.+.+++.. ... .|..+...+.+.+++.. .+++|
T Consensus 4 ~~~~vlItGa~g~iG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 83 (238)
T PRK05786 4 KGKKVAIIGVSEGLGYAVAYFALKEGAQVCINSRNENKLKRMKKTLSKYGNIHYVVGDVSSTESARNVIEKAAKVLNAID 83 (238)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467999999999999999999999999999999998877666323321 122 23333312333233221 13589
Q ss_pred EEEeCCChh------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 225 IYFENVGGK------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 225 ~vid~~g~~------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.++.+.|.. .+....++++++|+++.+++...
T Consensus 84 ~ii~~ag~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~ss~~~ 139 (238)
T PRK05786 84 GLVVTVGGYVEDTVEEFSGLEEMLTNHIKIPLYAVNASLRFLKEGSSIVLVSSMSG 139 (238)
T ss_pred EEEEcCCCcCCCchHHHHHHHHHHHHhchHHHHHHHHHHHHHhcCCEEEEEecchh
Confidence 999888741 13445566677899998887543
|
|
| >PRK05693 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.07 E-value=7.8e-05 Score=65.00 Aligned_cols=77 Identities=21% Similarity=0.374 Sum_probs=56.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHC--CCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYF--PEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~--~~~~d~vid~~ 230 (342)
.++||+||+|++|.+.++.+...|++|++++++.++.+.+. ..+... ..|..+...+.+.+.+.. .+++|+++++.
T Consensus 2 k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~vi~~a 80 (274)
T PRK05693 2 PVVLITGCSSGIGRALADAFKAAGYEVWATARKAEDVEALA-AAGFTAVQLDVNDGAALARLAEELEAEHGGLDVLINNA 80 (274)
T ss_pred CEEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEECC
Confidence 37999999999999999999889999999999888777665 555432 246655423333333332 23699999999
Q ss_pred C
Q 019332 231 G 231 (342)
Q Consensus 231 g 231 (342)
|
T Consensus 81 g 81 (274)
T PRK05693 81 G 81 (274)
T ss_pred C
Confidence 8
|
|
| >PRK05993 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=98.05 E-value=0.0001 Score=64.38 Aligned_cols=79 Identities=15% Similarity=0.299 Sum_probs=57.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHH---HHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALK---RYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~---~~~~~~~d~vi 227 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+. ..+... .+|..+..++.+.+. +...+.+|+++
T Consensus 3 ~~k~vlItGasggiG~~la~~l~~~G~~Vi~~~r~~~~~~~l~-~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~g~id~li 81 (277)
T PRK05993 3 MKRSILITGCSSGIGAYCARALQSDGWRVFATCRKEEDVAALE-AEGLEAFQLDYAEPESIAALVAQVLELSGGRLDALF 81 (277)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCceEEEccCCCHHHHHHHHHHHHHHcCCCccEEE
Confidence 3568999999999999999988888999999999988877776 555532 245555422322233 33334799999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
+++|
T Consensus 82 ~~Ag 85 (277)
T PRK05993 82 NNGA 85 (277)
T ss_pred ECCC
Confidence 9887
|
|
| >TIGR00518 alaDH alanine dehydrogenase | Back alignment and domain information |
|---|
Probab=98.01 E-value=7.3e-05 Score=67.82 Aligned_cols=100 Identities=22% Similarity=0.238 Sum_probs=71.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC--
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV-- 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~-- 230 (342)
+.+|+|.|+ |.+|+.+++.++.+|++|+++++++++.+.+...++......+.+..++.+.+. .+|++|+|+
T Consensus 167 ~~~VlViGa-G~vG~~aa~~a~~lGa~V~v~d~~~~~~~~l~~~~g~~v~~~~~~~~~l~~~l~-----~aDvVI~a~~~ 240 (370)
T TIGR00518 167 PGDVTIIGG-GVVGTNAAKMANGLGATVTILDINIDRLRQLDAEFGGRIHTRYSNAYEIEDAVK-----RADLLIGAVLI 240 (370)
T ss_pred CceEEEEcC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHHHhcCceeEeccCCHHHHHHHHc-----cCCEEEEcccc
Confidence 356999997 999999999999999999999999888777764566532222222212333332 489999997
Q ss_pred -Ch--h--hHHHHHHhhhhCCEEEEEceecccc
Q 019332 231 -GG--K--MLDAVLLNMKIHGRIAVCGMISQYN 258 (342)
Q Consensus 231 -g~--~--~~~~~~~~l~~~G~~v~~g~~~~~~ 258 (342)
+. . .....++.+++++.+++++...+.+
T Consensus 241 ~g~~~p~lit~~~l~~mk~g~vIvDva~d~GG~ 273 (370)
T TIGR00518 241 PGAKAPKLVSNSLVAQMKPGAVIVDVAIDQGGC 273 (370)
T ss_pred CCCCCCcCcCHHHHhcCCCCCEEEEEecCCCCC
Confidence 32 2 2367778899999999998765543
|
The family of known L-alanine dehydrogenases includes representatives from the Proteobacteria, Firmicutes, and Cyanobacteria, all with about 50 % identity or better. An outlier to this group in both sequence and gap pattern is the homolog from Helicobacter pylori, an epsilon division Proteobacteria, which must be considered a putative alanine dehydrogenase. Related proteins include saccharopine dehydrogenase and the N-terminal half of the NAD(P) transhydrogenase alpha subunit. All of these related proteins bind NAD and/or NADP. |
| >PRK06182 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00011 Score=64.12 Aligned_cols=80 Identities=23% Similarity=0.384 Sum_probs=57.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
++.+++|+|++|++|.+.++.+...|++|+++++++++.+.+. ..+... ..|..+..++.+.+++.. .+++|++++
T Consensus 2 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~l~~~~-~~~~~~~~~Dv~~~~~~~~~~~~~~~~~~~id~li~ 80 (273)
T PRK06182 2 QKKVALVTGASSGIGKATARRLAAQGYTVYGAARRVDKMEDLA-SLGVHPLSLDVTDEASIKAAVDTIIAEEGRIDVLVN 80 (273)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hCCCeEEEeeCCCHHHHHHHHHHHHHhcCCCCEEEE
Confidence 3578999999999999999998889999999999988776655 444432 345555423333344332 236999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 81 ~ag~ 84 (273)
T PRK06182 81 NAGY 84 (273)
T ss_pred CCCc
Confidence 9983
|
|
| >PRK12742 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=98.00 E-value=0.00012 Score=62.14 Aligned_cols=103 Identities=19% Similarity=0.245 Sum_probs=66.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+.++||+|++|++|.++++.+...|++|+.+.+ ++++.+.+.++++...+ .|..+...+.+.+.+. +.+|+++++
T Consensus 5 ~~k~vlItGasggIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~li~~ 82 (237)
T PRK12742 5 TGKKVLVLGGSRGIGAAIVRRFVTDGANVRFTYAGSKDAAERLAQETGATAVQTDSADRDAVIDVVRKS--GALDILVVN 82 (237)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHhCCeEEecCCCCHHHHHHHHHHh--CCCcEEEEC
Confidence 3679999999999999999999889999887765 44554444335565322 3444431233333321 369999999
Q ss_pred CChhh-----------H---------------HHHHHhhhhCCEEEEEceecc
Q 019332 230 VGGKM-----------L---------------DAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 230 ~g~~~-----------~---------------~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|... + ..+.+.++..|+++.+++...
T Consensus 83 ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 135 (237)
T PRK12742 83 AGIAVFGDALELDADDIDRLFKINIHAPYHASVEAARQMPEGGRIIIIGSVNG 135 (237)
T ss_pred CCCCCCCCcccCCHHHHHHHHhHHHHHHHHHHHHHHHHHhcCCeEEEEecccc
Confidence 87410 0 223344556789998887543
|
|
| >PRK00517 prmA ribosomal protein L11 methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=97.96 E-value=0.00014 Score=62.44 Aligned_cols=143 Identities=17% Similarity=0.255 Sum_probs=90.8
Q ss_pred CCCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHH
Q 019332 90 NPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLV 169 (342)
Q Consensus 90 v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~a 169 (342)
.+.+++||+++...+|.+|.. +...++.+ +++ +.+..+..+.. ......+. ..+.++.+||-.|. |. |..+
T Consensus 64 ~~p~~~g~~~~i~p~~~~~~~-~~~~~i~i-~p~--~afgtg~h~tt-~~~l~~l~--~~~~~~~~VLDiGc-Gs-G~l~ 134 (250)
T PRK00517 64 FHPIRIGDRLWIVPSWEDPPD-PDEINIEL-DPG--MAFGTGTHPTT-RLCLEALE--KLVLPGKTVLDVGC-GS-GILA 134 (250)
T ss_pred CCCEEEcCCEEEECCCcCCCC-CCeEEEEE-CCC--CccCCCCCHHH-HHHHHHHH--hhcCCCCEEEEeCC-cH-HHHH
Confidence 455789999999988988855 66678888 666 55422222211 11222232 22568899999995 44 8777
Q ss_pred HHHHHHcCC-EEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh----hHHHHHHh
Q 019332 170 GQFAKLLGC-YVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK----MLDAVLLN 241 (342)
Q Consensus 170 i~la~~~ga-~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~~ 241 (342)
+.+++ .|+ +|++++.++...+.+++.+ +....+..... + ..+|+|+...... .+..+.++
T Consensus 135 i~~~~-~g~~~v~giDis~~~l~~A~~n~~~~~~~~~~~~~~~-~----------~~fD~Vvani~~~~~~~l~~~~~~~ 202 (250)
T PRK00517 135 IAAAK-LGAKKVLAVDIDPQAVEAARENAELNGVELNVYLPQG-D----------LKADVIVANILANPLLELAPDLARL 202 (250)
T ss_pred HHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCceEEEccC-C----------CCcCEEEEcCcHHHHHHHHHHHHHh
Confidence 76555 566 6999999998777776322 22111111110 0 0489998665543 45678889
Q ss_pred hhhCCEEEEEce
Q 019332 242 MKIHGRIAVCGM 253 (342)
Q Consensus 242 l~~~G~~v~~g~ 253 (342)
|+++|+++..|.
T Consensus 203 LkpgG~lilsgi 214 (250)
T PRK00517 203 LKPGGRLILSGI 214 (250)
T ss_pred cCCCcEEEEEEC
Confidence 999999998765
|
|
| >cd05213 NAD_bind_Glutamyl_tRNA_reduct NADP-binding domain of glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=97.95 E-value=8.3e-05 Score=65.96 Aligned_cols=108 Identities=19% Similarity=0.215 Sum_probs=73.6
Q ss_pred cceeecCCCCCccchhhccCCchhhHHHhhhhhcCC---CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhH
Q 019332 115 QLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP---KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKI 190 (342)
Q Consensus 115 ~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~---~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~ 190 (342)
..+++ |+. +..+.+....+.++++.++...... .++.+|+|.|+ |.+|..+++.++..|+ +|+++.++.++.
T Consensus 140 ~a~~~-~k~--vr~et~i~~~~~sv~~~Av~~a~~~~~~l~~~~V~ViGa-G~iG~~~a~~L~~~g~~~V~v~~r~~~ra 215 (311)
T cd05213 140 KAIKV-GKR--VRTETGISRGAVSISSAAVELAEKIFGNLKGKKVLVIGA-GEMGELAAKHLAAKGVAEITIANRTYERA 215 (311)
T ss_pred HHHHH-HHH--HhhhcCCCCCCcCHHHHHHHHHHHHhCCccCCEEEEECc-HHHHHHHHHHHHHcCCCEEEEEeCCHHHH
Confidence 35666 776 5544444455677777776433221 47899999997 9999999999988776 888999988876
Q ss_pred HHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhH
Q 019332 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKML 235 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 235 (342)
..+.+++|.. ++++. ++.+.+. .+|+||.|++.+..
T Consensus 216 ~~la~~~g~~-~~~~~---~~~~~l~-----~aDvVi~at~~~~~ 251 (311)
T cd05213 216 EELAKELGGN-AVPLD---ELLELLN-----EADVVISATGAPHY 251 (311)
T ss_pred HHHHHHcCCe-EEeHH---HHHHHHh-----cCCEEEECCCCCch
Confidence 5444388873 33321 3333332 38999999998544
|
Glutamyl-tRNA reductase catalyzes the conversion of glutamyl-tRNA to glutamate-1-semialdehyde, initiating the synthesis of tetrapyrrole. Whereas tRNAs are generally associated with peptide bond formation in protein translation, here the tRNA activates glutamate in the initiation of tetrapyrrole biosynthesis in archaea, plants and many bacteria. In the first step, activated glutamate is reduced to glutamate-1-semi-aldehyde via the NADPH dependent glutamyl-tRNA reductase. Glutamyl-tRNA reductase forms a V-shaped dimer. Each monomer has 3 domains: an N-terminal catalytic domain, a classic nucleotide binding domain, and a C-terminal dimerization domain. Although the representative structure 1GPJ lacks a bound NADPH, a theoretical binding pocket has been described. (PMID 11172694). Amino acid dehydrogenase (DH)-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, |
| >PRK08265 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.90 E-value=0.00021 Score=61.85 Aligned_cols=81 Identities=14% Similarity=0.160 Sum_probs=56.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+|++|++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+..++.+.+.+.. .+.+|++
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 84 (261)
T PRK08265 5 AGKVAIVTGGATLIGAAVARALVAAGARVAIVDIDADNGAAVAASLGERARFIATDITDDAAIERAVATVVARFGRVDIL 84 (261)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeeEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4579999999999999999998889999999999887666555355532 1 234444323333333322 1368999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 85 v~~ag~ 90 (261)
T PRK08265 85 VNLACT 90 (261)
T ss_pred EECCCC
Confidence 998873
|
|
| >PF01488 Shikimate_DH: Shikimate / quinate 5-dehydrogenase; InterPro: IPR006151 This entry represents a domain found in shikimate and quinate dehydrogenases, as well as glutamyl-tRNA reductases | Back alignment and domain information |
|---|
Probab=97.88 E-value=8.2e-05 Score=57.37 Aligned_cols=94 Identities=21% Similarity=0.232 Sum_probs=63.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+++|.|+ |++|.+++..+...|+ +|+++.|+.+|.+.+.++++.. ..+++.+ +.+.+. .+|++|+
T Consensus 11 ~~~~vlviGa-Gg~ar~v~~~L~~~g~~~i~i~nRt~~ra~~l~~~~~~~~~~~~~~~~---~~~~~~-----~~DivI~ 81 (135)
T PF01488_consen 11 KGKRVLVIGA-GGAARAVAAALAALGAKEITIVNRTPERAEALAEEFGGVNIEAIPLED---LEEALQ-----EADIVIN 81 (135)
T ss_dssp TTSEEEEESS-SHHHHHHHHHHHHTTSSEEEEEESSHHHHHHHHHHHTGCSEEEEEGGG---HCHHHH-----TESEEEE
T ss_pred CCCEEEEECC-HHHHHHHHHHHHHcCCCEEEEEECCHHHHHHHHHHcCccccceeeHHH---HHHHHh-----hCCeEEE
Confidence 4689999997 9999999999999999 6999999999988777577432 3445543 233332 3999999
Q ss_pred CCChhhHHHHHHhhhhC----CEEEEEcee
Q 019332 229 NVGGKMLDAVLLNMKIH----GRIAVCGMI 254 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~----G~~v~~g~~ 254 (342)
|.+.....-.-..++.. +-++.++.+
T Consensus 82 aT~~~~~~i~~~~~~~~~~~~~~v~Dla~P 111 (135)
T PF01488_consen 82 ATPSGMPIITEEMLKKASKKLRLVIDLAVP 111 (135)
T ss_dssp -SSTTSTSSTHHHHTTTCHHCSEEEES-SS
T ss_pred ecCCCCcccCHHHHHHHHhhhhceeccccC
Confidence 99874222122233333 466777653
|
Shikimate 5-dehydrogenase (1.1.1.25 from EC) catalyses the conversion of shikimate to 5-dehydroshikimate [, ]. This reaction is part of the shikimate pathway which is involved in the biosynthesis of aromatic amino acids []. Quinate 5-dehydrogenase catalyses the conversion of quinate to 5-dehydroquinate. This reaction is part of the quinate pathway where quinic acid is exploited as a source of carbon in prokaryotes and microbial eukaryotes. Both the shikimate and quinate pathways share two common pathway metabolites, 3-dehydroquinate and dehydroshikimate. Glutamyl-tRNA reductase (1.2.1.70 from EC) catalyzes the first step of tetrapyrrole biosynthesis in plants, archaea and most bacteria. The dimeric enzyme has an unusual V-shaped architecture where each monomer consists of three domains linked by a long 'spinal' alpha-helix. The central catalytic domain specifically recognises the glutamate moiety of the substrate []. ; PDB: 2EV9_B 2CY0_B 1WXD_A 2D5C_A 1NVT_B 2EGG_A 3PWZ_A 3DOO_A 3DON_A 3FBT_C .... |
| >KOG1205 consensus Predicted dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.86 E-value=0.00022 Score=61.31 Aligned_cols=106 Identities=23% Similarity=0.310 Sum_probs=70.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe-e----EecCCchhHHHHHHHH--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE-A----FNYKEEPDLNEALKRY--FPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~-v----~~~~~~~~~~~~i~~~--~~~ 221 (342)
.|..|+|+|||+|||.+.+.-....|++++.+++..++++.+.+ +.+... + +|-.+..+....+.+. .-|
T Consensus 11 ~~kvVvITGASsGIG~~lA~~la~~G~~l~lvar~~rrl~~v~~~l~~~~~~~~v~~~~~Dvs~~~~~~~~~~~~~~~fg 90 (282)
T KOG1205|consen 11 AGKVVLITGASSGIGEALAYELAKRGAKLVLVARRARRLERVAEELRKLGSLEKVLVLQLDVSDEESVKKFVEWAIRHFG 90 (282)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCceEEeehhhhhHHHHHHHHHHhCCcCccEEEeCccCCHHHHHHHHHHHHHhcC
Confidence 46899999999999998887777889999988888887776622 333322 2 2333331333232221 224
Q ss_pred CccEEEeCCChh--------------------------hHHHHHHhhhhC--CEEEEEceeccc
Q 019332 222 GIDIYFENVGGK--------------------------MLDAVLLNMKIH--GRIAVCGMISQY 257 (342)
Q Consensus 222 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~--G~~v~~g~~~~~ 257 (342)
++|+.+|.+|-. ....+++.|++. |++|.+++..+.
T Consensus 91 ~vDvLVNNAG~~~~~~~~~~~~~~~~~~mdtN~~G~V~~Tk~alp~m~~r~~GhIVvisSiaG~ 154 (282)
T KOG1205|consen 91 RVDVLVNNAGISLVGFLEDTDIEDVRNVMDTNVFGTVYLTKAALPSMKKRNDGHIVVISSIAGK 154 (282)
T ss_pred CCCEEEecCccccccccccCcHHHHHHHhhhhchhhHHHHHHHHHHhhhcCCCeEEEEeccccc
Confidence 799999998831 124466666664 999999987664
|
|
| >KOG1209 consensus 1-Acyl dihydroxyacetone phosphate reductase and related dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.83 E-value=0.0003 Score=56.91 Aligned_cols=105 Identities=17% Similarity=0.274 Sum_probs=76.2
Q ss_pred CCEEEEecC-CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCch---hHHHHHHHHCCCCccEEE
Q 019332 153 GECVFISAA-SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEP---DLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga-~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~---~~~~~i~~~~~~~~d~vi 227 (342)
...|||+|. +||||.+.+.-....|+.|++++|+-++.+.+..++|.. .-+|-.+++ .+..++++...|..|+.+
T Consensus 7 ~k~VlItgcs~GGIG~ala~ef~~~G~~V~AtaR~~e~M~~L~~~~gl~~~kLDV~~~~~V~~v~~evr~~~~Gkld~L~ 86 (289)
T KOG1209|consen 7 PKKVLITGCSSGGIGYALAKEFARNGYLVYATARRLEPMAQLAIQFGLKPYKLDVSKPEEVVTVSGEVRANPDGKLDLLY 86 (289)
T ss_pred CCeEEEeecCCcchhHHHHHHHHhCCeEEEEEccccchHhhHHHhhCCeeEEeccCChHHHHHHHHHHhhCCCCceEEEE
Confidence 356888875 679999999888899999999999999998887678862 234444431 244556666667899999
Q ss_pred eCCChh-----------hH--------------HH--HHHhhhhCCEEEEEceeccc
Q 019332 228 ENVGGK-----------ML--------------DA--VLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 228 d~~g~~-----------~~--------------~~--~~~~l~~~G~~v~~g~~~~~ 257 (342)
|.+|-. .+ .. ....++..|++|.+|+..+.
T Consensus 87 NNAG~~C~~Pa~d~~i~ave~~f~vNvfG~irM~~a~~h~likaKGtIVnvgSl~~~ 143 (289)
T KOG1209|consen 87 NNAGQSCTFPALDATIAAVEQCFKVNVFGHIRMCRALSHFLIKAKGTIVNVGSLAGV 143 (289)
T ss_pred cCCCCCcccccccCCHHHHHhhhccceeeeehHHHHHHHHHHHccceEEEecceeEE
Confidence 988842 11 11 22356778999999987653
|
|
| >PRK07825 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.82 E-value=0.00035 Score=60.79 Aligned_cols=80 Identities=16% Similarity=0.187 Sum_probs=55.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC-CC-eeEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG-FD-EAFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
+.++||+||+|++|...++.+...|++|+++.+++++.+.+.+.++ .. ...|..+..++.+.+.+.. .+++|++++
T Consensus 5 ~~~ilVtGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (273)
T PRK07825 5 GKVVAITGGARGIGLATARALAALGARVAIGDLDEALAKETAAELGLVVGGPLDVTDPASFAAFLDAVEADLGPIDVLVN 84 (273)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 5689999999999999998888889999999999887765543554 22 1235554423332233222 136999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 85 ~ag~ 88 (273)
T PRK07825 85 NAGV 88 (273)
T ss_pred CCCc
Confidence 9883
|
|
| >PTZ00075 Adenosylhomocysteinase; Provisional | Back alignment and domain information |
|---|
Probab=97.80 E-value=0.0002 Score=65.92 Aligned_cols=92 Identities=18% Similarity=0.209 Sum_probs=71.2
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
..-.|.+|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|+.. . ++.+.++ ..|+++.
T Consensus 250 ~~LaGKtVgVIG~-G~IGr~vA~rL~a~Ga~ViV~e~dp~~a~~A~-~~G~~~-~------~leell~-----~ADIVI~ 315 (476)
T PTZ00075 250 VMIAGKTVVVCGY-GDVGKGCAQALRGFGARVVVTEIDPICALQAA-MEGYQV-V------TLEDVVE-----TADIFVT 315 (476)
T ss_pred CCcCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCchhHHHHH-hcCcee-c------cHHHHHh-----cCCEEEE
Confidence 3457999999996 99999999999999999999988777654454 456532 1 2333332 3899999
Q ss_pred CCCh-hhH-HHHHHhhhhCCEEEEEcee
Q 019332 229 NVGG-KML-DAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 229 ~~g~-~~~-~~~~~~l~~~G~~v~~g~~ 254 (342)
+.|. ..+ ...++.+++++.++.+|..
T Consensus 316 atGt~~iI~~e~~~~MKpGAiLINvGr~ 343 (476)
T PTZ00075 316 ATGNKDIITLEHMRRMKNNAIVGNIGHF 343 (476)
T ss_pred CCCcccccCHHHHhccCCCcEEEEcCCC
Confidence 9987 445 3789999999999999875
|
|
| >PRK07576 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.78 E-value=0.00033 Score=60.76 Aligned_cols=80 Identities=15% Similarity=0.215 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
++.++||+||+|++|...++.+...|++|+++++++++.+.+.+++ +.. . .+|..+..++...+++.. .+++
T Consensus 8 ~~k~ilItGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~~~i 87 (264)
T PRK07576 8 AGKNVVVVGGTSGINLGIAQAFARAGANVAVASRSQEKVDAAVAQLQQAGPEGLGVSADVRDYAAVEAAFAQIADEFGPI 87 (264)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 5679999999999999999988889999999998877654332222 221 1 234444323333333332 1368
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++|.+.|
T Consensus 88 D~vi~~ag 95 (264)
T PRK07576 88 DVLVSGAA 95 (264)
T ss_pred CEEEECCC
Confidence 99998886
|
|
| >PRK08339 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.77 E-value=0.00056 Score=59.25 Aligned_cols=105 Identities=22% Similarity=0.305 Sum_probs=68.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC---eeEecCCchhHHHHHHHHC-CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD---EAFNYKEEPDLNEALKRYF-PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~---~v~~~~~~~~~~~~i~~~~-~~~~ 223 (342)
.+.++||+|+++++|.+.++.+...|++|++++++.++.+.+.+++ +.. ...|..+..+..+.+.+.. .+++
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~g~i 86 (263)
T PRK08339 7 SGKLAFTTASSKGIGFGVARVLARAGADVILLSRNEENLKKAREKIKSESNVDVSYIVADLTKREDLERTVKELKNIGEP 86 (263)
T ss_pred CCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHHHhhCCC
Confidence 4678999999999999999999999999999999887765554333 321 1234444323333333221 2469
Q ss_pred cEEEeCCChh-----------h---------------HHHHHHhhhh--CCEEEEEceecc
Q 019332 224 DIYFENVGGK-----------M---------------LDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 224 d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
|++++++|.. . ...+++.++. .|+++.+++...
T Consensus 87 D~lv~nag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~l~~m~~~~~g~Ii~isS~~~ 147 (263)
T PRK08339 87 DIFFFSTGGPKPGYFMEMSMEDWEGAVKLLLYPAVYLTRALVPAMERKGFGRIIYSTSVAI 147 (263)
T ss_pred cEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEEcCccc
Confidence 9999998741 1 2334455543 489998887543
|
|
| >PRK07109 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.76 E-value=0.0005 Score=61.79 Aligned_cols=105 Identities=22% Similarity=0.183 Sum_probs=68.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+||+|++|.++++.+...|++|+++++++++.+.+.+ +.|... ..|..+..++.+.+.+.. -+.+
T Consensus 7 ~~k~vlITGas~gIG~~la~~la~~G~~Vvl~~R~~~~l~~~~~~l~~~g~~~~~v~~Dv~d~~~v~~~~~~~~~~~g~i 86 (334)
T PRK07109 7 GRQVVVITGASAGVGRATARAFARRGAKVVLLARGEEGLEALAAEIRAAGGEALAVVADVADAEAVQAAADRAEEELGPI 86 (334)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHCCCC
Confidence 45789999999999999999988899999999998877654432 234321 235544422322222221 1369
Q ss_pred cEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 224 DIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 224 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
|++++++|.. ....+++.+++ .|++|.+++...
T Consensus 87 D~lInnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~l~~~~~~~~g~iV~isS~~~ 147 (334)
T PRK07109 87 DTWVNNAMVTVFGPFEDVTPEEFRRVTEVTYLGVVHGTLAALRHMRPRDRGAIIQVGSALA 147 (334)
T ss_pred CEEEECCCcCCCCchhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEeCChhh
Confidence 9999998841 01234455554 589999887554
|
|
| >PRK05872 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.74 E-value=0.00021 Score=63.10 Aligned_cols=81 Identities=17% Similarity=0.242 Sum_probs=57.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--e--EecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--A--FNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v--~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+|++|++|.++++.+...|++|++++++.++.+.+.++++.. . . .|..+..+..+.+.+.. .+.+|
T Consensus 8 ~gk~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~id 87 (296)
T PRK05872 8 AGKVVVVTGAARGIGAELARRLHARGAKLALVDLEEAELAALAAELGGDDRVLTVVADVTDLAAMQAAAEEAVERFGGID 87 (296)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCCcEEEEEecCCCHHHHHHHHHHHHHHcCCCC
Confidence 4689999999999999999999999999999999988877665456531 1 1 44444322333333222 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 88 ~vI~nAG~ 95 (296)
T PRK05872 88 VVVANAGI 95 (296)
T ss_pred EEEECCCc
Confidence 99999984
|
|
| >COG2518 Pcm Protein-L-isoaspartate carboxylmethyltransferase [Posttranslational modification, protein turnover, chaperones] | Back alignment and domain information |
|---|
Probab=97.73 E-value=0.00037 Score=56.88 Aligned_cols=109 Identities=19% Similarity=0.273 Sum_probs=74.5
Q ss_pred ccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeE-ecCC
Q 019332 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAF-NYKE 207 (342)
Q Consensus 132 ~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~-~~~~ 207 (342)
++..+.+.|. .+ +...++++++||=+| +|.|+.++-+++..+ +|+.+.+.++=.+.+++ .+|...+. ...+
T Consensus 54 tis~P~~vA~-m~-~~L~~~~g~~VLEIG--tGsGY~aAvla~l~~-~V~siEr~~~L~~~A~~~L~~lg~~nV~v~~gD 128 (209)
T COG2518 54 TISAPHMVAR-ML-QLLELKPGDRVLEIG--TGSGYQAAVLARLVG-RVVSIERIEELAEQARRNLETLGYENVTVRHGD 128 (209)
T ss_pred eecCcHHHHH-HH-HHhCCCCCCeEEEEC--CCchHHHHHHHHHhC-eEEEEEEcHHHHHHHHHHHHHcCCCceEEEECC
Confidence 4444544554 22 567899999999999 678999999999988 99999988763333322 67774432 2222
Q ss_pred chhHHHHHHHHCCC-CccEEEeCCChhhH-HHHHHhhhhCCEEEEE
Q 019332 208 EPDLNEALKRYFPE-GIDIYFENVGGKML-DAVLLNMKIHGRIAVC 251 (342)
Q Consensus 208 ~~~~~~~i~~~~~~-~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~ 251 (342)
. ..-+... .||.|+-+.+.+.+ ...++.|+++|+++.-
T Consensus 129 G------~~G~~~~aPyD~I~Vtaaa~~vP~~Ll~QL~~gGrlv~P 168 (209)
T COG2518 129 G------SKGWPEEAPYDRIIVTAAAPEVPEALLDQLKPGGRLVIP 168 (209)
T ss_pred c------ccCCCCCCCcCEEEEeeccCCCCHHHHHhcccCCEEEEE
Confidence 1 1112222 69999888777444 6788999999998853
|
|
| >PRK06500 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00066 Score=58.09 Aligned_cols=80 Identities=18% Similarity=0.248 Sum_probs=55.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-e--EecCCchhHH---HHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-A--FNYKEEPDLN---EALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v--~~~~~~~~~~---~~i~~~~~~~~d~ 225 (342)
++.+++|+||+|++|...++.+...|++|+++++++++.+.+.++++... . .|..+..+.. +.+.+.. +++|+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~ 83 (249)
T PRK06500 5 QGKTALITGGTSGIGLETARQFLAEGARVAITGRDPASLEAARAELGESALVIRADAGDVAAQKALAQALAEAF-GRLDA 83 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 46789999999999999999999999999999998776665554565431 1 2333321222 2222222 36999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 84 vi~~ag~ 90 (249)
T PRK06500 84 VFINAGV 90 (249)
T ss_pred EEECCCC
Confidence 9999873
|
|
| >PLN03209 translocon at the inner envelope of chloroplast subunit 62; Provisional | Back alignment and domain information |
|---|
Probab=97.72 E-value=0.00055 Score=64.77 Aligned_cols=105 Identities=13% Similarity=0.183 Sum_probs=69.4
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--------CC-----Ce--eEecCCchhH
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--------GF-----DE--AFNYKEEPDL 211 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--------g~-----~~--v~~~~~~~~~ 211 (342)
..+.+.|.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.+ |. .. ..|..+.
T Consensus 74 ~~~~~~gKvVLVTGATGgIG~aLAr~LLk~G~~Vval~Rn~ekl~~l~~~l~~~~L~~~Ga~~~~~v~iV~gDLtD~--- 150 (576)
T PLN03209 74 ELDTKDEDLAFVAGATGKVGSRTVRELLKLGFRVRAGVRSAQRAESLVQSVKQMKLDVEGTQPVEKLEIVECDLEKP--- 150 (576)
T ss_pred ccccCCCCEEEEECCCCHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhhhhccccccccccCceEEEEecCCCH---
Confidence 356678899999999999999999998888999999999988765443121 21 01 1233332
Q ss_pred HHHHHHHCCCCccEEEeCCChhh----------------HHHHHHhhhh--CCEEEEEceecc
Q 019332 212 NEALKRYFPEGIDIYFENVGGKM----------------LDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 212 ~~~i~~~~~~~~d~vid~~g~~~----------------~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
+.+.+.. +++|+||+|+|... ...+++.+.. .++||.++....
T Consensus 151 -esI~~aL-ggiDiVVn~AG~~~~~v~d~~~~~~VN~~Gt~nLl~Aa~~agVgRIV~VSSiga 211 (576)
T PLN03209 151 -DQIGPAL-GNASVVICCIGASEKEVFDVTGPYRIDYLATKNLVDAATVAKVNHFILVTSLGT 211 (576)
T ss_pred -HHHHHHh-cCCCEEEEccccccccccchhhHHHHHHHHHHHHHHHHHHhCCCEEEEEccchh
Confidence 2333333 35999999988521 1223344433 368998887543
|
|
| >PRK06198 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.70 E-value=0.0031 Score=54.31 Aligned_cols=81 Identities=11% Similarity=0.136 Sum_probs=53.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHH---HcCCC---eeEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.+++|+|++|++|..+++.+...|++ |++++++.++...+.. +.+.. ..+|..+...+.+.+.+.. .++
T Consensus 5 ~~k~vlItGa~g~iG~~la~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 84 (260)
T PRK06198 5 DGKVALVTGGTQGLGAAIARAFAERGAAGLVICGRNAEKGEAQAAELEALGAKAVFVQADLSDVEDCRRVVAAADEAFGR 84 (260)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCCeEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 4678999999999999999999889997 9999988765542221 23432 1235544412333222221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|.++++.|.
T Consensus 85 id~li~~ag~ 94 (260)
T PRK06198 85 LDALVNAAGL 94 (260)
T ss_pred CCEEEECCCc
Confidence 9999999984
|
|
| >PRK12829 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.00064 Score=58.73 Aligned_cols=82 Identities=12% Similarity=0.181 Sum_probs=55.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC----eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD----EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~----~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
-++.++||+||+|++|..+++.+...|++|+++.+++++.+.+.+...-. ...|..+...+.+.+.+.. .+++|
T Consensus 9 ~~~~~vlItGa~g~iG~~~a~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 88 (264)
T PRK12829 9 LDGLRVLVTGGASGIGRAIAEAFAEAGARVHVCDVSEAALAATAARLPGAKVTATVADVADPAQVERVFDTAVERFGGLD 88 (264)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 46789999999999999999999889999999999877666555233221 2234444312222222221 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
.||.++|.
T Consensus 89 ~vi~~ag~ 96 (264)
T PRK12829 89 VLVNNAGI 96 (264)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >TIGR02853 spore_dpaA dipicolinic acid synthetase, A subunit | Back alignment and domain information |
|---|
Probab=97.69 E-value=0.0008 Score=58.84 Aligned_cols=93 Identities=23% Similarity=0.311 Sum_probs=68.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.+++|+|. |.+|.++++.++.+|++|++..+++++.+.+. ++|... +.+ . ++.+.+. ++|+|+++..
T Consensus 150 ~gk~v~IiG~-G~iG~avA~~L~~~G~~V~v~~R~~~~~~~~~-~~g~~~-~~~--~-~l~~~l~-----~aDiVint~P 218 (287)
T TIGR02853 150 HGSNVMVLGF-GRTGMTIARTFSALGARVFVGARSSADLARIT-EMGLIP-FPL--N-KLEEKVA-----EIDIVINTIP 218 (287)
T ss_pred CCCEEEEEcC-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCCee-ecH--H-HHHHHhc-----cCCEEEECCC
Confidence 5789999997 99999999999999999999999988777666 666532 221 1 2322222 4899999987
Q ss_pred hhhH-HHHHHhhhhCCEEEEEceec
Q 019332 232 GKML-DAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 232 ~~~~-~~~~~~l~~~G~~v~~g~~~ 255 (342)
...+ ...++.++++..++++++..
T Consensus 219 ~~ii~~~~l~~~k~~aliIDlas~P 243 (287)
T TIGR02853 219 ALVLTADVLSKLPKHAVIIDLASKP 243 (287)
T ss_pred hHHhCHHHHhcCCCCeEEEEeCcCC
Confidence 6432 45667788888888887743
|
This predicted Rossman fold-containing protein is the A subunit of dipicolinic acid synthetase as found in most, though not all, endospore-forming low-GC Gram-positive bacteria; it is absent in Clostridium. The B subunit is represented by TIGR02852. This protein is also known as SpoVFA. |
| >PF13460 NAD_binding_10: NADH(P)-binding ; PDB: 3OH8_A 3E8X_A 3GPI_A 3QVO_A 2Q46_B 1YBM_B 1XQ6_B 2Q4B_B 3EW7_A 3IUS_B | Back alignment and domain information |
|---|
Probab=97.68 E-value=0.0012 Score=53.72 Aligned_cols=93 Identities=19% Similarity=0.210 Sum_probs=65.3
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh---
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG--- 232 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~--- 232 (342)
|+|+||+|.+|..+++.+...|.+|++++|++++.+. ..++ +++..+-. +. +.+.+... ++|.||.++|.
T Consensus 1 I~V~GatG~vG~~l~~~L~~~~~~V~~~~R~~~~~~~---~~~~-~~~~~d~~-d~-~~~~~al~-~~d~vi~~~~~~~~ 73 (183)
T PF13460_consen 1 ILVFGATGFVGRALAKQLLRRGHEVTALVRSPSKAED---SPGV-EIIQGDLF-DP-DSVKAALK-GADAVIHAAGPPPK 73 (183)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTSEEEEEESSGGGHHH---CTTE-EEEESCTT-CH-HHHHHHHT-TSSEEEECCHSTTT
T ss_pred eEEECCCChHHHHHHHHHHHCCCEEEEEecCchhccc---cccc-ccceeeeh-hh-hhhhhhhh-hcchhhhhhhhhcc
Confidence 7999999999999999999999999999999998765 2233 22322221 22 33443333 59999999993
Q ss_pred --hhHHHHHHhhhhCC--EEEEEceec
Q 019332 233 --KMLDAVLLNMKIHG--RIAVCGMIS 255 (342)
Q Consensus 233 --~~~~~~~~~l~~~G--~~v~~g~~~ 255 (342)
.......+.++..| +++.++...
T Consensus 74 ~~~~~~~~~~a~~~~~~~~~v~~s~~~ 100 (183)
T PF13460_consen 74 DVDAAKNIIEAAKKAGVKRVVYLSSAG 100 (183)
T ss_dssp HHHHHHHHHHHHHHTTSSEEEEEEETT
T ss_pred cccccccccccccccccccceeeeccc
Confidence 34556666666654 788777644
|
... |
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.67 E-value=0.00077 Score=63.25 Aligned_cols=81 Identities=17% Similarity=0.256 Sum_probs=53.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh--hhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~--~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~ 225 (342)
.++.++||+|++|++|.+.++.+...|++|+++.++. ++.+.+.++++.. ..+|..+.......+.... .+++|+
T Consensus 208 ~~g~~vlItGasggIG~~la~~l~~~Ga~vi~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~ 287 (450)
T PRK08261 208 LAGKVALVTGAARGIGAAIAEVLARDGAHVVCLDVPAAGEALAAVANRVGGTALALDITAPDAPARIAEHLAERHGGLDI 287 (450)
T ss_pred CCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEeCCCHHHHHHHHHHHHHhCCCCCE
Confidence 3578999999999999999999988999999988743 3333333255543 2345555412222222221 236999
Q ss_pred EEeCCC
Q 019332 226 YFENVG 231 (342)
Q Consensus 226 vid~~g 231 (342)
+|++.|
T Consensus 288 vi~~AG 293 (450)
T PRK08261 288 VVHNAG 293 (450)
T ss_pred EEECCC
Confidence 999998
|
|
| >PLN02780 ketoreductase/ oxidoreductase | Back alignment and domain information |
|---|
Probab=97.66 E-value=0.0004 Score=62.00 Aligned_cols=81 Identities=14% Similarity=0.213 Sum_probs=56.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC----eeEecCCc-hhHHHHHHHHCCC-
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD----EAFNYKEE-PDLNEALKRYFPE- 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~----~v~~~~~~-~~~~~~i~~~~~~- 221 (342)
.|.+++|+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. ..+|..+. .+..+.+.+..++
T Consensus 52 ~g~~~lITGAs~GIG~alA~~La~~G~~Vil~~R~~~~l~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~l~~~~~~~ 131 (320)
T PLN02780 52 YGSWALVTGPTDGIGKGFAFQLARKGLNLVLVARNPDKLKDVSDSIQSKYSKTQIKTVVVDFSGDIDEGVKRIKETIEGL 131 (320)
T ss_pred cCCEEEEeCCCcHHHHHHHHHHHHCCCCEEEEECCHHHHHHHHHHHHHHCCCcEEEEEEEECCCCcHHHHHHHHHHhcCC
Confidence 5889999999999999888888778999999999998876554332 111 12344321 1344455555444
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 132 didilVnnAG~ 142 (320)
T PLN02780 132 DVGVLINNVGV 142 (320)
T ss_pred CccEEEEecCc
Confidence 57799998873
|
|
| >PRK12771 putative glutamate synthase (NADPH) small subunit; Provisional | Back alignment and domain information |
|---|
Probab=97.65 E-value=7.6e-05 Score=71.98 Aligned_cols=78 Identities=21% Similarity=0.347 Sum_probs=57.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC---------------------hhhHHHHHHHcCCCeeEecCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---------------------KDKIDLLKNKFGFDEAFNYKE 207 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s---------------------~~~~~~~~~~~g~~~v~~~~~ 207 (342)
...+|++|+|.|+ |++|+++++.++..|++|+++... +.+.+.++ ++|++..++...
T Consensus 133 ~~~~g~~V~VIGa-GpaGL~aA~~l~~~G~~V~v~e~~~~~GG~l~~gip~~~~~~~~~~~~l~~~~-~~Gv~~~~~~~~ 210 (564)
T PRK12771 133 APDTGKRVAVIGG-GPAGLSAAYHLRRMGHAVTIFEAGPKLGGMMRYGIPAYRLPREVLDAEIQRIL-DLGVEVRLGVRV 210 (564)
T ss_pred CCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEecCCCCCCeeeecCCCccCCHHHHHHHHHHHH-HCCCEEEeCCEE
Confidence 4678999999997 999999999999999999988742 34556777 889866555432
Q ss_pred -chhH-HHHHHHHCCCCccEEEeCCChh
Q 019332 208 -EPDL-NEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 208 -~~~~-~~~i~~~~~~~~d~vid~~g~~ 233 (342)
. +. .+.+. .++|.+|+++|..
T Consensus 211 ~~-~~~~~~~~----~~~D~Vi~AtG~~ 233 (564)
T PRK12771 211 GE-DITLEQLE----GEFDAVFVAIGAQ 233 (564)
T ss_pred CC-cCCHHHHH----hhCCEEEEeeCCC
Confidence 1 21 12221 2599999999973
|
|
| >PRK07326 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00074 Score=57.32 Aligned_cols=81 Identities=17% Similarity=0.293 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC---Cee--EecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF---DEA--FNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~---~~v--~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.+.+++|+||+|++|..+++.+...|++|+++++++++.+.+.+++.. -+. .|..+..++.+.+++... +++|
T Consensus 5 ~~~~ilItGatg~iG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 84 (237)
T PRK07326 5 KGKVALITGGSKGIGFAIAEALLAEGYKVAITARDQKELEEAAAELNNKGNVLGLAADVRDEADVQRAVDAIVAAFGGLD 84 (237)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEeeCCHHHHHHHHHHHhccCcEEEEEccCCCHHHHHHHHHHHHHHcCCCC
Confidence 367899999999999999888888899999999988776655434431 111 244433233343433321 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++|++.|.
T Consensus 85 ~vi~~ag~ 92 (237)
T PRK07326 85 VLIANAGV 92 (237)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK06200 2,3-dihydroxy-2,3-dihydrophenylpropionate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00037 Score=60.30 Aligned_cols=81 Identities=19% Similarity=0.238 Sum_probs=56.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+|+++++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+.. .+.+|++
T Consensus 5 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 84 (263)
T PRK06200 5 HGQVALITGGGSGIGRALVERFLAEGARVAVLERSAEKLASLRQRFGDHVLVVEGDVTSYADNQRAVDQTVDAFGKLDCF 84 (263)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 4679999999999999999998889999999999988777666444431 1 234444313333333322 2369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 85 i~~ag~ 90 (263)
T PRK06200 85 VGNAGI 90 (263)
T ss_pred EECCCC
Confidence 999883
|
|
| >PRK06057 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.64 E-value=0.00042 Score=59.67 Aligned_cols=81 Identities=17% Similarity=0.168 Sum_probs=56.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
.+.+|+|+||+|++|.+.++.+...|++|+++++++.+.+.+.++++.. ...|..+...+.+.+.+.. .+++|+++.
T Consensus 6 ~~~~vlItGasggIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 85 (255)
T PRK06057 6 AGRVAVITGGGSGIGLATARRLAAEGATVVVGDIDPEAGKAAADEVGGLFVPTDVTDEDAVNALFDTAAETYGSVDIAFN 85 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHcCCcEEEeeCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4689999999999999999999989999999999887766554355442 2245555412222232221 136899999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
+.|.
T Consensus 86 ~ag~ 89 (255)
T PRK06057 86 NAGI 89 (255)
T ss_pred CCCc
Confidence 8874
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00067 Score=64.94 Aligned_cols=105 Identities=17% Similarity=0.181 Sum_probs=71.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+|+++++|.+.++.+...|++|++++++.++.+.+.++++... ..|..+..++.+.+.+... +.+|++
T Consensus 268 ~~k~~lItGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 347 (520)
T PRK06484 268 SPRVVAITGGARGIGRAVADRFAAAGDRLLIIDRDAEGAKKLAEALGDEHLSVQADITDEAAVESAFAQIQARWGRLDVL 347 (520)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56789999999999999999888899999999998888777664555421 2344444233333333221 369999
Q ss_pred EeCCChh------------h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 227 FENVGGK------------M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 227 id~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++++|.. . ...+++.++.+|+++.+++...
T Consensus 348 i~nAg~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 404 (520)
T PRK06484 348 VNNAGIAEVFKPSLEQSAEDFTRVYDVNLSGAFACARAAARLMSQGGVIVNLGSIAS 404 (520)
T ss_pred EECCCCcCCCCChhhCCHHHHHHHHHhCcHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 9988731 0 1223445556799999887554
|
|
| >PRK06139 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.63 E-value=0.00031 Score=62.98 Aligned_cols=79 Identities=22% Similarity=0.369 Sum_probs=55.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe---eEecCCchh---HHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE---AFNYKEEPD---LNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~---v~~~~~~~~---~~~~i~~~~~~~ 222 (342)
.+.++||+||+|++|.++++.+...|++|+++++++++.+.+.+ +.|... ..|..+..+ +.+.+.+. .++
T Consensus 6 ~~k~vlITGAs~GIG~aia~~la~~G~~Vvl~~R~~~~l~~~~~~~~~~g~~~~~~~~Dv~d~~~v~~~~~~~~~~-~g~ 84 (330)
T PRK06139 6 HGAVVVITGASSGIGQATAEAFARRGARLVLAARDEEALQAVAEECRALGAEVLVVPTDVTDADQVKALATQAASF-GGR 84 (330)
T ss_pred CCCEEEEcCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHh-cCC
Confidence 46799999999999999999999999999999999887765442 335431 235444312 22223332 246
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 85 iD~lVnnAG 93 (330)
T PRK06139 85 IDVWVNNVG 93 (330)
T ss_pred CCEEEECCC
Confidence 999999998
|
|
| >PRK09186 flagellin modification protein A; Provisional | Back alignment and domain information |
|---|
Probab=97.62 E-value=0.00098 Score=57.31 Aligned_cols=80 Identities=18% Similarity=0.224 Sum_probs=54.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC---e-eEecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD---E-AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~---~-v~~~~~~~~~~~~i~~~~~--~ 221 (342)
.+.++||+|++|++|.+.+..+...|++|+++.+++++.+.+.+++ +.. . ..|..+...+.+.+.+... +
T Consensus 3 ~~k~vlItGas~giG~~~a~~l~~~g~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~ 82 (256)
T PRK09186 3 KGKTILITGAGGLIGSALVKAILEAGGIVIAADIDKEALNELLESLGKEFKSKKLSLVELDITDQESLEEFLSKSAEKYG 82 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecChHHHHHHHHHHHhhcCCCceeEEEecCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999999889999999999887765443233 221 1 2355444233333333221 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|+++++++
T Consensus 83 ~id~vi~~A~ 92 (256)
T PRK09186 83 KIDGAVNCAY 92 (256)
T ss_pred CccEEEECCc
Confidence 5899999885
|
|
| >PRK07806 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00098 Score=57.03 Aligned_cols=103 Identities=17% Similarity=0.200 Sum_probs=63.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+|++|++|...++.+...|++|+++.++.+ +.+.+.++ .+.. . ..|..+..++...+.+... ++
T Consensus 5 ~~k~vlItGasggiG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (248)
T PRK07806 5 PGKTALVTGSSRGIGADTAKILAGAGAHVVVNYRQKAPRANKVVAEIEAAGGRASAVGADLTDEESVAALMDTAREEFGG 84 (248)
T ss_pred CCcEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCchHhHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhCCC
Confidence 3578999999999999999988888999999887653 33322212 2321 1 2344444233333332221 36
Q ss_pred ccEEEeCCChh--------------------hHHHHHHhhhhCCEEEEEcee
Q 019332 223 IDIYFENVGGK--------------------MLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 223 ~d~vid~~g~~--------------------~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+|+++.+.|.. .++.+.+.+..+|+++.+++.
T Consensus 85 ~d~vi~~ag~~~~~~~~~~~~~~vn~~~~~~l~~~~~~~~~~~~~iv~isS~ 136 (248)
T PRK07806 85 LDALVLNASGGMESGMDEDYAMRLNRDAQRNLARAALPLMPAGSRVVFVTSH 136 (248)
T ss_pred CcEEEECCCCCCCCCCCcceeeEeeeHHHHHHHHHHHhhccCCceEEEEeCc
Confidence 89988887641 123344444556899888763
|
|
| >PRK07231 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.00092 Score=57.24 Aligned_cols=81 Identities=19% Similarity=0.266 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC--CC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG--FD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g--~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+||+|++|..+++.+...|++|+++++++++.+.+...+. .. ...|..+...+...+.+.. .+.+|
T Consensus 4 ~~~~vlItGasg~iG~~l~~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 83 (251)
T PRK07231 4 EGKVAIVTGASSGIGEGIARRFAAEGARVVVTDRNEEAAERVAAEILAGGRAIAVAADVSDEADVEAAVAAALERFGSVD 83 (251)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 35689999999999999998888889999999999877665543433 11 1234344323333333221 13689
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++|.+.|.
T Consensus 84 ~vi~~ag~ 91 (251)
T PRK07231 84 ILVNNAGT 91 (251)
T ss_pred EEEECCCC
Confidence 99998874
|
|
| >PRK12939 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.61 E-value=0.0009 Score=57.26 Aligned_cols=81 Identities=16% Similarity=0.198 Sum_probs=54.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.+++|+|++|++|...+..+...|++|+++.+++++.+.+.+++ +.. . ..|..+..++.+.+.+... +++
T Consensus 6 ~~~~vlItGa~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 85 (250)
T PRK12939 6 AGKRALVTGAARGLGAAFAEALAEAGATVAFNDGLAAEARELAAALEAAGGRAHAIAADLADPASVQRFFDAAAAALGGL 85 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999998889999999998887665443232 321 1 2344443122222222211 369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.++|.
T Consensus 86 d~vi~~ag~ 94 (250)
T PRK12939 86 DGLVNNAGI 94 (250)
T ss_pred CEEEECCCC
Confidence 999999984
|
|
| >PRK07060 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00071 Score=57.73 Aligned_cols=79 Identities=19% Similarity=0.248 Sum_probs=56.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.+.+++|+|++|++|...++.+...|++|++++++.++.+.+.++.+... ..|..+. +..+...+. .+++|++|++.
T Consensus 8 ~~~~~lItGa~g~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~-~~~~d~vi~~a 85 (245)
T PRK07060 8 SGKSVLVTGASSGIGRACAVALAQRGARVVAAARNAAALDRLAGETGCEPLRLDVGDD-AAIRAALAA-AGAFDGLVNCA 85 (245)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCeEEEecCCCH-HHHHHHHHH-hCCCCEEEECC
Confidence 46799999999999999999999999999999998877766653455432 2455543 222222222 13699999999
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
|.
T Consensus 86 g~ 87 (245)
T PRK07060 86 GI 87 (245)
T ss_pred CC
Confidence 84
|
|
| >PRK06484 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.60 E-value=0.00094 Score=63.93 Aligned_cols=81 Identities=22% Similarity=0.319 Sum_probs=58.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+|+++++|.+.++.+...|++|+.++++.++.+.+.++++.. ..+|..+..++.+.+.+.. .+.+|++
T Consensus 4 ~~k~~lITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (520)
T PRK06484 4 QSRVVLVTGAAGGIGRAACQRFARAGDQVVVADRNVERARERADSLGPDHHALAMDVSDEAQIREGFEQLHREFGRIDVL 83 (520)
T ss_pred CCeEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 5689999999999999999999999999999999888776665466542 2245444423333333322 1369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+++.|.
T Consensus 84 i~nag~ 89 (520)
T PRK06484 84 VNNAGV 89 (520)
T ss_pred EECCCc
Confidence 998874
|
|
| >PRK08415 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.59 E-value=0.0011 Score=57.89 Aligned_cols=105 Identities=10% Similarity=0.106 Sum_probs=67.7
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHcCCCe--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+ +++|.++++.+...|++|+.+.++++ +.+.+.++++... .+|-.+...+.+.+.+... +.
T Consensus 4 ~~k~~lItGas~~~GIG~aiA~~la~~G~~Vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~i~~~~g~ 83 (274)
T PRK08415 4 KGKKGLIVGVANNKSIAYGIAKACFEQGAELAFTYLNEALKKRVEPIAQELGSDYVYELDVSKPEHFKSLAESLKKDLGK 83 (274)
T ss_pred CCcEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCceEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 46799999996 79999999988889999999888742 3333332455322 2455544233333333222 46
Q ss_pred ccEEEeCCCh-h-----------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 223 IDIYFENVGG-K-----------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|++++++|. . .....++.++.+|+++.+++...
T Consensus 84 iDilVnnAG~~~~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~p~m~~~g~Iv~isS~~~ 147 (274)
T PRK08415 84 IDFIVHSVAFAPKEALEGSFLETSKEAFNIAMEISVYSLIELTRALLPLLNDGASVLTLSYLGG 147 (274)
T ss_pred CCEEEECCccCcccccccccccCCHHHHHHHhhhhhHHHHHHHHHHHHHhccCCcEEEEecCCC
Confidence 9999999883 1 01334556677899998876543
|
|
| >TIGR03325 BphB_TodD cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.0005 Score=59.49 Aligned_cols=80 Identities=21% Similarity=0.244 Sum_probs=55.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
++.+++|+||+|++|.+.++.+...|++|+++.++.++.+.+.+..+.. . ..|..+..+..+.+++... +.+|++
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 83 (262)
T TIGR03325 4 KGEVVLVTGGASGLGRAIVDRFVAEGARVAVLDKSAAGLQELEAAHGDAVVGVEGDVRSLDDHKEAVARCVAAFGKIDCL 83 (262)
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCceEEEEeccCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4689999999999999999988889999999999887776665233321 1 1344443123333333221 368999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
+++.|
T Consensus 84 i~~Ag 88 (262)
T TIGR03325 84 IPNAG 88 (262)
T ss_pred EECCC
Confidence 99987
|
Members of this family occur as the BphD protein of biphenyl catabolism and as the TodD protein of toluene catabolism. Members catalyze the second step in each pathway and proved interchangeable when tested; the first and fourth enzymes in each pathway confer metabolic specificity. In the context of biphenyl degradation, the enzyme acts as cis-2,3-dihydrobiphenyl-2,3-diol dehydrogenase (EC 1.3.1.56), while in toluene degradation it acts as cis-toluene dihydrodiol dehydrogenase. |
| >PRK08017 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.58 E-value=0.00043 Score=59.56 Aligned_cols=78 Identities=17% Similarity=0.273 Sum_probs=56.9
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhH---HHHHHHHCCCCccEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDL---NEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~---~~~i~~~~~~~~d~vid~ 229 (342)
.++||+|++|++|.++++.+...|++|+++.++.++.+.++ +.++.. ..|..+...+ .+.+.+...+.+|.++.+
T Consensus 3 k~vlVtGasg~IG~~la~~l~~~g~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~~~~~ii~~ 81 (256)
T PRK08017 3 KSVLITGCSSGIGLEAALELKRRGYRVLAACRKPDDVARMN-SLGFTGILLDLDDPESVERAADEVIALTDNRLYGLFNN 81 (256)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHhHHHH-hCCCeEEEeecCCHHHHHHHHHHHHHhcCCCCeEEEEC
Confidence 47999999999999999999989999999999998887776 667643 3455443122 233333333468898888
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
.|.
T Consensus 82 ag~ 84 (256)
T PRK08017 82 AGF 84 (256)
T ss_pred CCC
Confidence 773
|
|
| >PRK12828 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.57 E-value=0.0012 Score=56.03 Aligned_cols=81 Identities=14% Similarity=0.138 Sum_probs=52.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe-eEecCCchhHHHHHHHHC--CCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE-AFNYKEEPDLNEALKRYF--PEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~-v~~~~~~~~~~~~i~~~~--~~~~d~ 225 (342)
++.++||+|++|++|..+++.+...|++|++++++.++.....++ .+... ..|..+..++.+.+.+.. .+++|+
T Consensus 6 ~~k~vlItGatg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~ 85 (239)
T PRK12828 6 QGKVVAITGGFGGLGRATAAWLAARGARVALIGRGAAPLSQTLPGVPADALRIGGIDLVDPQAARRAVDEVNRQFGRLDA 85 (239)
T ss_pred CCCEEEEECCCCcHhHHHHHHHHHCCCeEEEEeCChHhHHHHHHHHhhcCceEEEeecCCHHHHHHHHHHHHHHhCCcCE
Confidence 367999999999999999998888899999999977654322212 22221 134433313322232221 136999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++++.|.
T Consensus 86 vi~~ag~ 92 (239)
T PRK12828 86 LVNIAGA 92 (239)
T ss_pred EEECCcc
Confidence 9998873
|
|
| >PRK08267 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.56 E-value=0.0017 Score=55.98 Aligned_cols=79 Identities=19% Similarity=0.317 Sum_probs=55.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC-CC---eeEecCCchhHHHHHHHH---CCCCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG-FD---EAFNYKEEPDLNEALKRY---FPEGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g-~~---~v~~~~~~~~~~~~i~~~---~~~~~d~v 226 (342)
.++||+||+|++|...++.+...|++|++++++.++.+.+.+.++ .. ..+|..+..++.+.+.+. ..+.+|++
T Consensus 2 k~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~~id~v 81 (260)
T PRK08267 2 KSIFITGAASGIGRATALLFAAEGWRVGAYDINEAGLAALAAELGAGNAWTGALDVTDRAAWDAALADFAAATGGRLDVL 81 (260)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCCEE
Confidence 479999999999999999888889999999998887766653433 11 124555442333333322 13469999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+.++|.
T Consensus 82 i~~ag~ 87 (260)
T PRK08267 82 FNNAGI 87 (260)
T ss_pred EECCCC
Confidence 999984
|
|
| >PRK10538 malonic semialdehyde reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.53 E-value=0.0016 Score=55.83 Aligned_cols=78 Identities=18% Similarity=0.343 Sum_probs=54.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEEEeC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIYFEN 229 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~vid~ 229 (342)
+++|+|++|++|.+.+..+...|++|+++++++++.+.+.+.++.. . ..|..+...+.+.+.+... +++|.++.+
T Consensus 2 ~vlItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~vi~~ 81 (248)
T PRK10538 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWRNIDVLVNN 81 (248)
T ss_pred EEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhccceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 6899999999999999999889999999999988776665344432 1 1344443233333333221 369999998
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
+|.
T Consensus 82 ag~ 84 (248)
T PRK10538 82 AGL 84 (248)
T ss_pred CCc
Confidence 874
|
|
| >PRK00045 hemA glutamyl-tRNA reductase; Reviewed | Back alignment and domain information |
|---|
Probab=97.51 E-value=0.00046 Score=64.02 Aligned_cols=147 Identities=20% Similarity=0.171 Sum_probs=87.6
Q ss_pred CCCCcccccEEEEEecCCCCCCCCCCEEE-ec-----------cccceeEeecCCcceeecCCCCCccchhhccCCchhh
Q 019332 72 KPGMPISGYGVAKVLDSENPEFKKGDLVW-GM-----------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMT 139 (342)
Q Consensus 72 ~~G~e~~G~g~v~~vG~~v~~~~vGd~V~-~~-----------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~t 139 (342)
.-|+|..+ -+-+|++++.+.-+|+.-+ +- |+......-=-...+++ |+. +..+.+....+.++
T Consensus 91 ~~g~ea~~--hl~~V~~GldS~V~GE~qIlgQvk~a~~~a~~~g~~g~~l~~lf~~a~~~-~k~--v~~~t~i~~~~~Sv 165 (423)
T PRK00045 91 HEGEEAVR--HLFRVASGLDSMVLGEPQILGQVKDAYALAQEAGTVGTILNRLFQKAFSV-AKR--VRTETGIGAGAVSV 165 (423)
T ss_pred cCCHHHHH--HHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHH-Hhh--HhhhcCCCCCCcCH
Confidence 35888666 7777888877755555322 11 11110000000112344 444 33223333345667
Q ss_pred HHHhhhhhcC---CCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 140 AYAGFYEVCS---PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 140 a~~al~~~~~---~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
++.++..... -.++.+|+|.|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. ++++. ++.+.+
T Consensus 166 ~~~Av~~a~~~~~~~~~~~vlViGa-G~iG~~~a~~L~~~G~~~V~v~~r~~~ra~~la~~~g~~-~~~~~---~~~~~l 240 (423)
T PRK00045 166 ASAAVELAKQIFGDLSGKKVLVIGA-GEMGELVAKHLAEKGVRKITVANRTLERAEELAEEFGGE-AIPLD---ELPEAL 240 (423)
T ss_pred HHHHHHHHHHhhCCccCCEEEEECc-hHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCc-EeeHH---HHHHHh
Confidence 7777643222 257789999997 9999999999999998 8999999988866444377753 33321 332222
Q ss_pred HHHCCCCccEEEeCCChh
Q 019332 216 KRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~~ 233 (342)
. ++|+||+|+|++
T Consensus 241 ~-----~aDvVI~aT~s~ 253 (423)
T PRK00045 241 A-----EADIVISSTGAP 253 (423)
T ss_pred c-----cCCEEEECCCCC
Confidence 2 489999999973
|
|
| >PRK07062 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00071 Score=58.59 Aligned_cols=81 Identities=14% Similarity=0.209 Sum_probs=54.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCCe----eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFDE----AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.+++|+|+++++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|..+...+.+.+.+.. .+
T Consensus 7 ~~k~~lItGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 86 (265)
T PRK07062 7 EGRVAVVTGGSSGIGLATVELLLEAGASVAICGRDEERLASAEARLREKFPGARLLAARCDVLDEADVAAFAAAVEARFG 86 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEecCCCHHHHHHHHHHHHHhcC
Confidence 4679999999999999999999899999999999887665443222 1111 234444422322233222 23
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 87 ~id~li~~Ag~ 97 (265)
T PRK07062 87 GVDMLVNNAGQ 97 (265)
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
|
| >PF12847 Methyltransf_18: Methyltransferase domain; PDB: 3G2Q_A 3G2O_A 3G2M_B 3G2P_B 3D2L_B 1IM8_B 3NJR_A 3E05_H 3EVZ_A 3HM2_A | Back alignment and domain information |
|---|
Probab=97.49 E-value=0.00038 Score=51.63 Aligned_cols=95 Identities=21% Similarity=0.300 Sum_probs=64.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHH-HcCCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~-~~ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
|+.+||-.| .|.|..++.+++ ..+++|++++.+++-.+.+++.. +...-+..... ++ .. .....+.+|+|+
T Consensus 1 p~~~vLDlG--cG~G~~~~~l~~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~i~~~~~-d~-~~-~~~~~~~~D~v~ 75 (112)
T PF12847_consen 1 PGGRVLDLG--CGTGRLSIALARLFPGARVVGVDISPEMLEIARERAAEEGLSDRITFVQG-DA-EF-DPDFLEPFDLVI 75 (112)
T ss_dssp TTCEEEEET--TTTSHHHHHHHHHHTTSEEEEEESSHHHHHHHHHHHHHTTTTTTEEEEES-CC-HG-GTTTSSCEEEEE
T ss_pred CCCEEEEEc--CcCCHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeEEEEC-cc-cc-CcccCCCCCEEE
Confidence 578999998 466888889998 57889999999998888887554 33211222222 33 11 111122699999
Q ss_pred eCC-Ch----h------hHHHHHHhhhhCCEEEEE
Q 019332 228 ENV-GG----K------MLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 228 d~~-g~----~------~~~~~~~~l~~~G~~v~~ 251 (342)
... .. . .+..+.+.|+|+|+++..
T Consensus 76 ~~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~lvi~ 110 (112)
T PF12847_consen 76 CSGFTLHFLLPLDERRRVLERIRRLLKPGGRLVIN 110 (112)
T ss_dssp ECSGSGGGCCHHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ECCCccccccchhHHHHHHHHHHHhcCCCcEEEEE
Confidence 877 22 1 267888999999998753
|
... |
| >PRK12823 benD 1,6-dihydroxycyclohexa-2,4-diene-1-carboxylate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.0022 Score=55.28 Aligned_cols=79 Identities=22% Similarity=0.230 Sum_probs=52.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|.+.++.+...|++|+++++++...+... ++ +.+ ...|..+..+..+.+.+.. .+.+
T Consensus 7 ~~k~vlVtGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 85 (260)
T PRK12823 7 AGKVVVVTGAAQGIGRGVALRAAAEGARVVLVDRSELVHEVAA-ELRAAGGEALALTADLETYAGAQAAMAAAVEAFGRI 85 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCchHHHHHHH-HHHhcCCeEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999988888999999998754323322 32 332 1235544323333333322 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 86 d~lv~nAg 93 (260)
T PRK12823 86 DVLINNVG 93 (260)
T ss_pred eEEEECCc
Confidence 99999987
|
|
| >PRK06196 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00081 Score=59.92 Aligned_cols=80 Identities=15% Similarity=0.226 Sum_probs=54.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC-CC-eeEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG-FD-EAFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++. .. ...|..+...+.+.+.+.. .+++|+++
T Consensus 25 ~~k~vlITGasggIG~~~a~~L~~~G~~Vv~~~R~~~~~~~~~~~l~~v~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~li 104 (315)
T PRK06196 25 SGKTAIVTGGYSGLGLETTRALAQAGAHVIVPARRPDVAREALAGIDGVEVVMLDLADLESVRAFAERFLDSGRRIDILI 104 (315)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhhCeEEEccCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 46799999999999999998888889999999998877655442332 21 1234444323333333322 23699999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
+++|
T Consensus 105 ~nAg 108 (315)
T PRK06196 105 NNAG 108 (315)
T ss_pred ECCC
Confidence 9987
|
|
| >PRK08177 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.48 E-value=0.00089 Score=56.47 Aligned_cols=78 Identities=19% Similarity=0.199 Sum_probs=54.1
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+++|+|++|++|.+.++.+...|++|+++++++++.+.+. +++-. ..+|..+...+.+.+.....+++|+++.++|
T Consensus 2 k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~d~~~~~~~~~~~~~~~id~vi~~ag 80 (225)
T PRK08177 2 RTALIIGASRGLGLGLVDRLLERGWQVTATVRGPQQDTALQ-ALPGVHIEKLDMNDPASLDQLLQRLQGQRFDLLFVNAG 80 (225)
T ss_pred CEEEEeCCCchHHHHHHHHHHhCCCEEEEEeCCCcchHHHH-hccccceEEcCCCCHHHHHHHHHHhhcCCCCEEEEcCc
Confidence 47999999999999988888888999999999887766665 44321 2244444412333333333337999998876
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 81 ~ 81 (225)
T PRK08177 81 I 81 (225)
T ss_pred c
Confidence 3
|
|
| >PRK05866 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.47 E-value=0.00064 Score=59.90 Aligned_cols=81 Identities=22% Similarity=0.356 Sum_probs=54.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. .. .|..+...+.+.+.+.. .+.+
T Consensus 39 ~~k~vlItGasggIG~~la~~La~~G~~Vi~~~R~~~~l~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 118 (293)
T PRK05866 39 TGKRILLTGASSGIGEAAAEQFARRGATVVAVARREDLLDAVADRITRAGGDAMAVPCDLSDLDAVDALVADVEKRIGGV 118 (293)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4578999999999999999988888999999999987765554222 321 11 34444312223233221 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++|+|.
T Consensus 119 d~li~~AG~ 127 (293)
T PRK05866 119 DILINNAGR 127 (293)
T ss_pred CEEEECCCC
Confidence 999999874
|
|
| >PRK08263 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.46 E-value=0.0022 Score=55.92 Aligned_cols=80 Identities=24% Similarity=0.244 Sum_probs=53.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+.++.. . ..|..+...+.+.+.+.. .+++|.++
T Consensus 3 ~k~vlItGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~vi 82 (275)
T PRK08263 3 EKVWFITGASRGFGRAWTEAALERGDRVVATARDTATLADLAEKYGDRLLPLALDVTDRAAVFAAVETAVEHFGRLDIVV 82 (275)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhccCCeeEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 458999999999999998888888999999999888776655333321 1 134443313322233221 13689999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
.++|.
T Consensus 83 ~~ag~ 87 (275)
T PRK08263 83 NNAGY 87 (275)
T ss_pred ECCCC
Confidence 99884
|
|
| >PRK07832 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.0023 Score=55.62 Aligned_cols=78 Identities=12% Similarity=0.149 Sum_probs=51.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC----eeEecCCchhHHHHHHHHC--CCCccE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD----EAFNYKEEPDLNEALKRYF--PEGIDI 225 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~----~v~~~~~~~~~~~~i~~~~--~~~~d~ 225 (342)
+++|+||+|++|..+++.+...|++|+++.+++++.+.+.++ .+.. ...|..+...+.+.+.+.. .+++|+
T Consensus 2 ~vlItGas~giG~~la~~la~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~ 81 (272)
T PRK07832 2 RCFVTGAASGIGRATALRLAAQGAELFLTDRDADGLAQTVADARALGGTVPEHRALDISDYDAVAAFAADIHAAHGSMDV 81 (272)
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEeeCCCHHHHHHHHHHHHHhcCCCCE
Confidence 689999999999999998888999999999887665443222 2332 1245555412222222221 136999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++++.|.
T Consensus 82 lv~~ag~ 88 (272)
T PRK07832 82 VMNIAGI 88 (272)
T ss_pred EEECCCC
Confidence 9999984
|
|
| >PRK06949 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00095 Score=57.46 Aligned_cols=82 Identities=20% Similarity=0.292 Sum_probs=55.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC-Cee--EecCCchhHHHHHHHHC--CCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF-DEA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~-~~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
..+.+++|+|++|++|.++++.+...|++|+++++++++.+.+...+ +. ..+ .|..+..++.+.+.+.. .+.
T Consensus 7 ~~~k~ilItGasg~IG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 86 (258)
T PRK06949 7 LEGKVALVTGASSGLGARFAQVLAQAGAKVVLASRRVERLKELRAEIEAEGGAAHVVSLDVTDYQSIKAAVAHAETEAGT 86 (258)
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35789999999999999999999889999999999988765554222 21 112 33333313333333221 236
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++++.|.
T Consensus 87 ~d~li~~ag~ 96 (258)
T PRK06949 87 IDILVNNSGV 96 (258)
T ss_pred CCEEEECCCC
Confidence 8999999983
|
|
| >PRK07063 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00075 Score=58.26 Aligned_cols=81 Identities=12% Similarity=0.136 Sum_probs=54.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC---eeEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD---EAFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~---~v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+|++|++|.++++.+...|++|+.+++++++.+.+.+++ +.. ...|..+..++.+.+.+.. .+
T Consensus 6 ~~k~vlVtGas~gIG~~~a~~l~~~G~~vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 85 (260)
T PRK07063 6 AGKVALVTGAAQGIGAAIARAFAREGAAVALADLDAALAERAAAAIARDVAGARVLAVPADVTDAASVAAAVAAAEEAFG 85 (260)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 3678999999999999999988889999999999887665544333 211 1224444323333333221 13
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 86 ~id~li~~ag~ 96 (260)
T PRK07063 86 PLDVLVNNAGI 96 (260)
T ss_pred CCcEEEECCCc
Confidence 69999999883
|
|
| >PRK07814 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.45 E-value=0.00083 Score=58.13 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
++.++||+|++|++|.+.++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+...+.+.+.+.. .+++
T Consensus 9 ~~~~vlItGasggIG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 88 (263)
T PRK07814 9 DDQVAVVTGAGRGLGAAIALAFAEAGADVLIAARTESQLDEVAEQIRAAGRRAHVVAADLAHPEATAGLAGQAVEAFGRL 88 (263)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999988889999999999887665443232 221 1 235444412322233221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 89 d~vi~~Ag 96 (263)
T PRK07814 89 DIVVNNVG 96 (263)
T ss_pred CEEEECCC
Confidence 99999987
|
|
| >PRK05854 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0012 Score=58.86 Aligned_cols=80 Identities=18% Similarity=0.196 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchh---HHHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPD---LNEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~---~~~~i~~~~~ 220 (342)
.+.+++|+||++++|.++++.+...|++|+.++++.++.+.+.+++ +.. . .+|..+..+ +.+++.+..
T Consensus 13 ~gk~~lITGas~GIG~~~a~~La~~G~~Vil~~R~~~~~~~~~~~l~~~~~~~~v~~~~~Dl~d~~sv~~~~~~~~~~~- 91 (313)
T PRK05854 13 SGKRAVVTGASDGLGLGLARRLAAAGAEVILPVRNRAKGEAAVAAIRTAVPDAKLSLRALDLSSLASVAALGEQLRAEG- 91 (313)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEecCCCHHHHHHHHHHHHHhC-
Confidence 3679999999999999999888888999999999987765443232 111 1 234444312 222333222
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+.+|++++++|.
T Consensus 92 ~~iD~li~nAG~ 103 (313)
T PRK05854 92 RPIHLLINNAGV 103 (313)
T ss_pred CCccEEEECCcc
Confidence 369999998873
|
|
| >PRK09072 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.43 E-value=0.0027 Score=54.89 Aligned_cols=79 Identities=18% Similarity=0.295 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--CC-Cee--EecCCchhHH---HHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--GF-DEA--FNYKEEPDLN---EALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--g~-~~v--~~~~~~~~~~---~~i~~~~~~~~ 223 (342)
++.++||+|++|++|...++.+...|++|+++++++++.+.+.+++ +. ... .|..+...+. +.+.+ .+.+
T Consensus 4 ~~~~vlItG~s~~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~--~~~i 81 (263)
T PRK09072 4 KDKRVLLTGASGGIGQALAEALAAAGARLLLVGRNAEKLEALAARLPYPGRHRWVVADLTSEAGREAVLARARE--MGGI 81 (263)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHh--cCCC
Confidence 4578999999999999999988888999999999988766555333 11 111 2333331222 22222 2468
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|.++.++|.
T Consensus 82 d~lv~~ag~ 90 (263)
T PRK09072 82 NVLINNAGV 90 (263)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >PRK06914 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.002 Score=56.26 Aligned_cols=79 Identities=15% Similarity=0.279 Sum_probs=53.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC---e--eEecCCchhHHHHHHHHCC--CC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD---E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~---~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
+.++||+||+|++|...+..+...|++|++++++.++.+.+.+. .+.. . ..|..+..++.. +.+... +.
T Consensus 3 ~k~~lItGasg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~-~~~~~~~~~~ 81 (280)
T PRK06914 3 KKIAIVTGASSGFGLLTTLELAKKGYLVIATMRNPEKQENLLSQATQLNLQQNIKVQQLDVTDQNSIHN-FQLVLKEIGR 81 (280)
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceeEEecCCCCHHHHHH-HHHHHHhcCC
Confidence 56899999999999999988888899999999888766544312 2211 1 235555423333 444322 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++.|.|.
T Consensus 82 id~vv~~ag~ 91 (280)
T PRK06914 82 IDLLVNNAGY 91 (280)
T ss_pred eeEEEECCcc
Confidence 8999999874
|
|
| >PRK05884 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.0012 Score=55.76 Aligned_cols=76 Identities=13% Similarity=0.205 Sum_probs=53.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+++|+|++|++|.+.++.+...|++|+.+.++.++.+.+.++++... ..|..+..++.+.+++.. +.+|+++++.|
T Consensus 2 ~vlItGas~giG~~ia~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~-~~id~lv~~ag 78 (223)
T PRK05884 2 EVLVTGGDTDLGRTIAEGFRNDGHKVTLVGARRDDLEVAAKELDVDAIVCDNTDPASLEEARGLFP-HHLDTIVNVPA 78 (223)
T ss_pred eEEEEeCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCcEEecCCCCHHHHHHHHHHHh-hcCcEEEECCC
Confidence 58999999999999999888889999999998887766553555432 245554413333333332 25899998865
|
|
| >PRK08261 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00023 Score=66.77 Aligned_cols=95 Identities=17% Similarity=0.202 Sum_probs=67.5
Q ss_pred hcCCCCCCEEE----EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCC
Q 019332 147 VCSPKQGECVF----ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 147 ~~~~~~~~~vl----I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~ 221 (342)
..++++|+++| |+||+|++|.+++|+++..|++|+++.++..+....+ ..+.+ .++|.+.. ...+.+....
T Consensus 28 l~~~~~~~~~~~~~~l~~~~~g~~~~~~~~~~~~g~~v~~~~~~~~~~~~~~-~~~~~~~~~d~~~~-~~~~~l~~~~-- 103 (450)
T PRK08261 28 LRRYRPGQPLLDGPVLVGGAGRLAEALAALLAGLGYDVVANNDGGLTWAAGW-GDRFGALVFDATGI-TDPADLKALY-- 103 (450)
T ss_pred ccCCCCCCCCCCCceEEccCchhHHHHHHHHhhCCCeeeecCccccccccCc-CCcccEEEEECCCC-CCHHHHHHHH--
Confidence 46788999998 9999999999999999999999999887666443333 33443 35666554 4444444321
Q ss_pred CccEEEeCCChhhHHHHHHhhhhCCEEEEEceecc
Q 019332 222 GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
..+...++.|.++|+++.++....
T Consensus 104 -----------~~~~~~l~~l~~~griv~i~s~~~ 127 (450)
T PRK08261 104 -----------EFFHPVLRSLAPCGRVVVLGRPPE 127 (450)
T ss_pred -----------HHHHHHHHhccCCCEEEEEccccc
Confidence 345667778888889888876543
|
|
| >PRK05867 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.42 E-value=0.00086 Score=57.65 Aligned_cols=81 Identities=23% Similarity=0.272 Sum_probs=55.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|.+.++.+...|++|+++.++.++.+.+.+++ +.. ...|..+...+.+.+.+.. .+.+
T Consensus 8 ~~k~vlVtGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 87 (253)
T PRK05867 8 HGKRALITGASTGIGKRVALAYVEAGAQVAIAARHLDALEKLADEIGTSGGKVVPVCCDVSQHQQVTSMLDQVTAELGGI 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4679999999999999999999889999999999887766554333 221 1234444323333333221 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++++.|.
T Consensus 88 d~lv~~ag~ 96 (253)
T PRK05867 88 DIAVCNAGI 96 (253)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK07831 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0012 Score=57.05 Aligned_cols=83 Identities=19% Similarity=0.292 Sum_probs=55.6
Q ss_pred CCCCCEEEEecCCc-HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----cCCCee----EecCCchhHHHHHHHHC-
Q 019332 150 PKQGECVFISAASG-AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK----FGFDEA----FNYKEEPDLNEALKRYF- 219 (342)
Q Consensus 150 ~~~~~~vlI~ga~g-~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~----~g~~~v----~~~~~~~~~~~~i~~~~- 219 (342)
+..+.++||+|++| ++|.++++.+...|++|+++++++++.+...++ ++...+ .|..+..++...+.+..
T Consensus 14 ~~~~k~vlItG~sg~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~ 93 (262)
T PRK07831 14 LLAGKVVLVTAAAGTGIGSATARRALEEGARVVISDIHERRLGETADELAAELGLGRVEAVVCDVTSEAQVDALIDAAVE 93 (262)
T ss_pred ccCCCEEEEECCCcccHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 44578999999986 899999999999999999999887766544322 343222 34444312222232221
Q ss_pred -CCCccEEEeCCCh
Q 019332 220 -PEGIDIYFENVGG 232 (342)
Q Consensus 220 -~~~~d~vid~~g~ 232 (342)
.+.+|++++++|.
T Consensus 94 ~~g~id~li~~ag~ 107 (262)
T PRK07831 94 RLGRLDVLVNNAGL 107 (262)
T ss_pred HcCCCCEEEECCCC
Confidence 1369999999984
|
|
| >PRK12429 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0026 Score=54.71 Aligned_cols=80 Identities=19% Similarity=0.285 Sum_probs=53.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|...++.+...|++|+++++++++.+.+.+++ +.. ...|..+...+.+.+.+.. .+++
T Consensus 3 ~~~~vlItG~sg~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 82 (258)
T PRK12429 3 KGKVALVTGAASGIGLEIALALAKEGAKVVIADLNDEAAAAAAEALQKAGGKAIGVAMDVTDEEAINAGIDYAVETFGGV 82 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 3578999999999999999988888999999999887665443232 321 1234444322333333221 1368
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++|.++|
T Consensus 83 d~vi~~a~ 90 (258)
T PRK12429 83 DILVNNAG 90 (258)
T ss_pred CEEEECCC
Confidence 99999887
|
|
| >PRK06128 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.41 E-value=0.0021 Score=56.89 Aligned_cols=104 Identities=18% Similarity=0.225 Sum_probs=63.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HH----HHHHHcCCCe---eEecCCchhHHHHHHHHC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--ID----LLKNKFGFDE---AFNYKEEPDLNEALKRYF--P 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~----~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~ 220 (342)
.+.++||+|++|++|.+.+..+...|++|+++.++.+. .+ .++ ..+... ..|..+...+.+.+.+.. .
T Consensus 54 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 132 (300)
T PRK06128 54 QGRKALITGADSGIGRATAIAFAREGADIALNYLPEEEQDAAEVVQLIQ-AEGRKAVALPGDLKDEAFCRQLVERAVKEL 132 (300)
T ss_pred CCCEEEEecCCCcHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHH-HcCCeEEEEecCCCCHHHHHHHHHHHHHHh
Confidence 46799999999999999998888899999887764321 11 222 334321 124444312223333222 1
Q ss_pred CCccEEEeCCChh---------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 221 EGIDIYFENVGGK---------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 221 ~~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+++|++++++|.. .++.+++.++.+|+++.+++...
T Consensus 133 g~iD~lV~nAg~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~~sS~~~ 195 (300)
T PRK06128 133 GGLDILVNIAGKQTAVKDIADITTEQFDATFKTNVYAMFWLCKAAIPHLPPGASIINTGSIQS 195 (300)
T ss_pred CCCCEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhcCcCCEEEEECCccc
Confidence 3699999988731 11233444566789998877544
|
|
| >PRK06180 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.40 E-value=0.0011 Score=57.89 Aligned_cols=80 Identities=18% Similarity=0.150 Sum_probs=55.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~vi 227 (342)
+.++||+|++|++|.+.++.+...|++|++++++.++.+.+....+.. . ..|..+...+.+.+++... +++|+++
T Consensus 4 ~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~l~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~~~~d~vv 83 (277)
T PRK06180 4 MKTWLITGVSSGFGRALAQAALAAGHRVVGTVRSEAARADFEALHPDRALARLLDVTDFDAIDAVVADAEATFGPIDVLV 83 (277)
T ss_pred CCEEEEecCCChHHHHHHHHHHhCcCEEEEEeCCHHHHHHHHhhcCCCeeEEEccCCCHHHHHHHHHHHHHHhCCCCEEE
Confidence 568999999999999999988888999999999988776665222221 1 2344443123333333221 3589999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
+++|.
T Consensus 84 ~~ag~ 88 (277)
T PRK06180 84 NNAGY 88 (277)
T ss_pred ECCCc
Confidence 99885
|
|
| >PRK05653 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0033 Score=53.52 Aligned_cols=80 Identities=19% Similarity=0.283 Sum_probs=53.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHC--CCCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
+.++||+|++|++|...++.+...|++|+++.+++++.+.+.. ..+.. .. .|..+...+.+.+.+.. .+.+|
T Consensus 5 ~~~ilItGasg~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (246)
T PRK05653 5 GKTALVTGASRGIGRAIALRLAADGAKVVIYDSNEEAAEALAAELRAAGGEARVLVFDVSDEAAVRALIEAAVEAFGALD 84 (246)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChhHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999999888889999999998876544332 22322 11 34444323333333321 13589
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
.++.++|.
T Consensus 85 ~vi~~ag~ 92 (246)
T PRK05653 85 ILVNNAGI 92 (246)
T ss_pred EEEECCCc
Confidence 99999875
|
|
| >PRK06181 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0014 Score=56.67 Aligned_cols=79 Identities=20% Similarity=0.293 Sum_probs=52.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHCC--CCccE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYFP--EGIDI 225 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~~--~~~d~ 225 (342)
.++||+|++|++|..+++.+...|++|+++++++++.+.+.+.+ +.. ...|..+...+...+.+... +++|.
T Consensus 2 ~~vlVtGasg~iG~~la~~l~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~ 81 (263)
T PRK06181 2 KVVIITGASEGIGRALAVRLARAGAQLVLAARNETRLASLAQELADHGGEALVVPTDVSDAEACERLIEAAVARFGGIDI 81 (263)
T ss_pred CEEEEecCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCCE
Confidence 57999999999999999988888999999999876654433222 321 12344443133333333221 36899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++.|.|.
T Consensus 82 vi~~ag~ 88 (263)
T PRK06181 82 LVNNAGI 88 (263)
T ss_pred EEECCCc
Confidence 9999874
|
|
| >KOG1014 consensus 17 beta-hydroxysteroid dehydrogenase type 3, HSD17B3 [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.39 E-value=0.0012 Score=56.96 Aligned_cols=80 Identities=23% Similarity=0.370 Sum_probs=61.9
Q ss_pred CCCCEEEEecCCcHHHHH-HHHHHHHcCCEEEEEeCChhhHHHHHHHc----CC---CeeEecCCchh-HHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQL-VGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GF---DEAFNYKEEPD-LNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~-ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~---~~v~~~~~~~~-~~~~i~~~~~~ 221 (342)
+.|++.+|+||+.|||.+ |-+||+ .|.+|+.+.|+.+|++.++++. ++ ..++|+.++ + .-+.+++...+
T Consensus 47 ~~g~WAVVTGaTDGIGKayA~eLAk-rG~nvvLIsRt~~KL~~v~kEI~~~~~vev~~i~~Dft~~-~~~ye~i~~~l~~ 124 (312)
T KOG1014|consen 47 KLGSWAVVTGATDGIGKAYARELAK-RGFNVVLISRTQEKLEAVAKEIEEKYKVEVRIIAIDFTKG-DEVYEKLLEKLAG 124 (312)
T ss_pred hcCCEEEEECCCCcchHHHHHHHHH-cCCEEEEEeCCHHHHHHHHHHHHHHhCcEEEEEEEecCCC-chhHHHHHHHhcC
Confidence 456899999999999986 666666 8999999999999998776543 43 235788876 4 35666666666
Q ss_pred -CccEEEeCCCh
Q 019332 222 -GIDIYFENVGG 232 (342)
Q Consensus 222 -~~d~vid~~g~ 232 (342)
.+-+.+|++|-
T Consensus 125 ~~VgILVNNvG~ 136 (312)
T KOG1014|consen 125 LDVGILVNNVGM 136 (312)
T ss_pred CceEEEEecccc
Confidence 78889999994
|
|
| >PRK07478 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.38 E-value=0.001 Score=57.19 Aligned_cols=81 Identities=25% Similarity=0.349 Sum_probs=54.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+|++|++|.+.++.+...|++|+.+++++++.+.+.+++ +.. .. .|..+.....+.+.+... +.+
T Consensus 5 ~~k~~lItGas~giG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (254)
T PRK07478 5 NGKVAIITGASSGIGRAAAKLFAREGAKVVVGARRQAELDQLVAEIRAEGGEAVALAGDVRDEAYAKALVALAVERFGGL 84 (254)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 3578999999999999999888889999999999887766554232 321 11 244443122222332221 369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 85 d~li~~ag~ 93 (254)
T PRK07478 85 DIAFNNAGT 93 (254)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK06101 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0056 Score=52.14 Aligned_cols=76 Identities=21% Similarity=0.300 Sum_probs=50.9
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-eeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-EAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.+++|+||+|++|...+..+...|++|+++++++++.+.+. +.+. . ...|..+..++.+.+++. ....|.++.++
T Consensus 2 ~~vlItGas~giG~~la~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~-~~~~d~~i~~a 79 (240)
T PRK06101 2 TAVLITGATSGIGKQLALDYAKQGWQVIACGRNQSVLDELH-TQSANIFTLAFDVTDHPGTKAALSQL-PFIPELWIFNA 79 (240)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HhcCCCeEEEeeCCCHHHHHHHHHhc-ccCCCEEEEcC
Confidence 47999999999999888888888999999999988777665 3321 1 124555442344444432 22467766666
Q ss_pred C
Q 019332 231 G 231 (342)
Q Consensus 231 g 231 (342)
|
T Consensus 80 g 80 (240)
T PRK06101 80 G 80 (240)
T ss_pred c
Confidence 5
|
|
| >PRK05717 oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.37 E-value=0.0013 Score=56.66 Aligned_cols=81 Identities=14% Similarity=0.206 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.|.+++|+|++|++|..++..+...|++|+.++++.++.+.+.+.++.. ...|..+..++.+.+.+... +.+|++
T Consensus 9 ~~k~vlItG~sg~IG~~~a~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~id~l 88 (255)
T PRK05717 9 NGRVALVTGAARGIGLGIAAWLIAEGWQVVLADLDRERGSKVAKALGENAWFIAMDVADEAQVAAGVAEVLGQFGRLDAL 88 (255)
T ss_pred CCCEEEEeCCcchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 4678999999999999999888888999999988876655544244432 12344443223232333222 358999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+.++|.
T Consensus 89 i~~ag~ 94 (255)
T PRK05717 89 VCNAAI 94 (255)
T ss_pred EECCCc
Confidence 998884
|
|
| >PRK07904 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0017 Score=55.94 Aligned_cols=84 Identities=14% Similarity=0.146 Sum_probs=53.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhh-HHHHHHH---cCC-C-ee--EecCCchhHHHHHHHHC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDK-IDLLKNK---FGF-D-EA--FNYKEEPDLNEALKRYF 219 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~-~~~~~~~---~g~-~-~v--~~~~~~~~~~~~i~~~~ 219 (342)
.+..+.++||+||+|++|.+.++-+... |++|+++++++++ .+.+.++ .+. . ++ +|..+..++.+.+++..
T Consensus 4 ~~~~~~~vlItGas~giG~~la~~l~~~gg~~V~~~~r~~~~~~~~~~~~l~~~~~~~v~~~~~D~~~~~~~~~~~~~~~ 83 (253)
T PRK07904 4 AVGNPQTILLLGGTSEIGLAICERYLKNAPARVVLAALPDDPRRDAAVAQMKAAGASSVEVIDFDALDTDSHPKVIDAAF 83 (253)
T ss_pred ccCCCcEEEEEcCCcHHHHHHHHHHHhcCCCeEEEEeCCcchhHHHHHHHHHhcCCCceEEEEecCCChHHHHHHHHHHH
Confidence 3567789999999999999988776656 5899999998765 4433212 232 1 22 34444313333333332
Q ss_pred C-CCccEEEeCCCh
Q 019332 220 P-EGIDIYFENVGG 232 (342)
Q Consensus 220 ~-~~~d~vid~~g~ 232 (342)
. +++|+++++.|.
T Consensus 84 ~~g~id~li~~ag~ 97 (253)
T PRK07904 84 AGGDVDVAIVAFGL 97 (253)
T ss_pred hcCCCCEEEEeeec
Confidence 2 479999887764
|
|
| >PRK06841 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0013 Score=56.51 Aligned_cols=80 Identities=14% Similarity=0.223 Sum_probs=53.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe----eEecCCchhHHHHHHHHC--CCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE----AFNYKEEPDLNEALKRYF--PEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~i~~~~--~~~~d~ 225 (342)
.+.++||+||+|++|...++.+...|++|+.++++++..+... ++.... ..|..+...+.+.+.+.. .+++|+
T Consensus 14 ~~k~vlItGas~~IG~~la~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~d~ 92 (255)
T PRK06841 14 SGKVAVVTGGASGIGHAIAELFAAKGARVALLDRSEDVAEVAA-QLLGGNAKGLVCDVSDSQSVEAAVAAVISAFGRIDI 92 (255)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhhCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCE
Confidence 4679999999999999998888888999999998876544444 332211 234433312222222221 136899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++.++|.
T Consensus 93 vi~~ag~ 99 (255)
T PRK06841 93 LVNSAGV 99 (255)
T ss_pred EEECCCC
Confidence 9999984
|
|
| >cd01078 NAD_bind_H4MPT_DH NADP binding domain of methylene tetrahydromethanopterin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.36 E-value=0.0024 Score=52.61 Aligned_cols=78 Identities=18% Similarity=0.257 Sum_probs=53.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC----CC-eeEecCCchhHHHHHHHHCCCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG----FD-EAFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
++.+++|.|++|++|.+++..+...|++|+++.++.++.+.+.+++. .. ...+..+..++.+.++ ++|+|
T Consensus 27 ~~~~vlVlGgtG~iG~~~a~~l~~~g~~V~l~~R~~~~~~~l~~~l~~~~~~~~~~~~~~~~~~~~~~~~-----~~diV 101 (194)
T cd01078 27 KGKTAVVLGGTGPVGQRAAVLLAREGARVVLVGRDLERAQKAADSLRARFGEGVGAVETSDDAARAAAIK-----GADVV 101 (194)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhhcCCcEEEeeCCCHHHHHHHHh-----cCCEE
Confidence 56799999999999998888888889999999999887766653342 21 1122222212223332 48999
Q ss_pred EeCCChhh
Q 019332 227 FENVGGKM 234 (342)
Q Consensus 227 id~~g~~~ 234 (342)
|.+.....
T Consensus 102 i~at~~g~ 109 (194)
T cd01078 102 FAAGAAGV 109 (194)
T ss_pred EECCCCCc
Confidence 99887643
|
Methylene Tetrahydromethanopterin Dehydrogenase (H4MPT DH) NADP binding domain. NADP-dependent H4MPT DH catalyzes the dehydrogenation of methylene- H4MPT and methylene-tetrahydrofolate (H4F) with NADP+ as cofactor. H4F and H4MPT are both cofactors that carry the one-carbon units between the formyl and methyl oxidation level. H4F and H4MPT are structurally analogous to each other with respect to the pterin moiety, but each has distinct side chain. H4MPT is present only in anaerobic methanogenic archaea and aerobic methylotrophic proteobacteria. H4MPT seems to have evolved independently from H4F and functions as a distinct carrier in C1 metabolism. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclo |
| >PRK07890 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.001 Score=57.24 Aligned_cols=81 Identities=17% Similarity=0.225 Sum_probs=54.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ...|..+...+...+.+... +.+
T Consensus 4 ~~k~vlItGa~~~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (258)
T PRK07890 4 KGKVVVVSGVGPGLGRTLAVRAARAGADVVLAARTAERLDEVAAEIDDLGRRALAVPTDITDEDQCANLVALALERFGRV 83 (258)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHhCCceEEEecCCCCHHHHHHHHHHHHHHcCCc
Confidence 5678999999999999999988899999999999887665544233 221 22344443233333333211 358
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.+.|.
T Consensus 84 d~vi~~ag~ 92 (258)
T PRK07890 84 DALVNNAFR 92 (258)
T ss_pred cEEEECCcc
Confidence 999998874
|
|
| >PRK07533 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.35 E-value=0.0032 Score=54.36 Aligned_cols=105 Identities=10% Similarity=0.053 Sum_probs=64.8
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChhhH---HHHHHHcCCCee--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKI---DLLKNKFGFDEA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+ +++|.+.++.+...|++|+++.++++.. +.+.++++.... +|-.+..+..+.+.+.. .+.
T Consensus 9 ~~k~~lItGas~g~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 88 (258)
T PRK07533 9 AGKRGLVVGIANEQSIAWGCARAFRALGAELAVTYLNDKARPYVEPLAEELDAPIFLPLDVREPGQLEAVFARIAEEWGR 88 (258)
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHHHhhccceEEecCcCCHHHHHHHHHHHHHHcCC
Confidence 46899999997 4999999988888999999998875432 333323443222 33333312332332222 146
Q ss_pred ccEEEeCCChh---------------h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 223 IDIYFENVGGK---------------M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~---------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|++++++|.. . ...+++.++.+|+++.+++...
T Consensus 89 ld~lv~nAg~~~~~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~g~Ii~iss~~~ 152 (258)
T PRK07533 89 LDFLLHSIAFAPKEDLHGRVVDCSREGFALAMDVSCHSFIRMARLAEPLMTNGGSLLTMSYYGA 152 (258)
T ss_pred CCEEEEcCccCCcccccCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHhccCCEEEEEecccc
Confidence 99999988731 1 1334455666789888776443
|
|
| >KOG0725 consensus Reductases with broad range of substrate specificities [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.00096 Score=57.82 Aligned_cols=82 Identities=21% Similarity=0.352 Sum_probs=57.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC---CC------eeEecCCc---hhHHHHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG---FD------EAFNYKEE---PDLNEALKRY 218 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g---~~------~v~~~~~~---~~~~~~i~~~ 218 (342)
-.+..+||+|+++|+|.+.+..+...|++|+.+.+++++.+...+++. .. .+.|-.+. .++.+...+.
T Consensus 6 l~gkvalVTG~s~GIG~aia~~la~~Ga~v~i~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~l~~~~~~~ 85 (270)
T KOG0725|consen 6 LAGKVALVTGGSSGIGKAIALLLAKAGAKVVITGRSEERLEETAQELGGLGYTGGKVLAIVCDVSKEVDVEKLVEFAVEK 85 (270)
T ss_pred CCCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCCeeEEEECcCCCHHHHHHHHHHHHHH
Confidence 357889999999999999999999999999999999988766553322 21 12333332 1233333344
Q ss_pred CCCCccEEEeCCCh
Q 019332 219 FPEGIDIYFENVGG 232 (342)
Q Consensus 219 ~~~~~d~vid~~g~ 232 (342)
..|.+|++++.+|.
T Consensus 86 ~~GkidiLvnnag~ 99 (270)
T KOG0725|consen 86 FFGKIDILVNNAGA 99 (270)
T ss_pred hCCCCCEEEEcCCc
Confidence 44579999998884
|
|
| >PF02826 2-Hacid_dh_C: D-isomer specific 2-hydroxyacid dehydrogenase, NAD binding domain; InterPro: IPR006140 A number of NAD-dependent 2-hydroxyacid dehydrogenases which seem to be specific for the D-isomer of their substrate have been shown to be functionally and structurally related | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0019 Score=52.30 Aligned_cols=90 Identities=24% Similarity=0.276 Sum_probs=64.2
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
--.|.+|.|+|. |.||+..+++++.+|++|++..++........ ..+. .+. ++.+.+++ .|+|+.+
T Consensus 33 ~l~g~tvgIiG~-G~IG~~vA~~l~~fG~~V~~~d~~~~~~~~~~-~~~~----~~~---~l~ell~~-----aDiv~~~ 98 (178)
T PF02826_consen 33 ELRGKTVGIIGY-GRIGRAVARRLKAFGMRVIGYDRSPKPEEGAD-EFGV----EYV---SLDELLAQ-----ADIVSLH 98 (178)
T ss_dssp -STTSEEEEEST-SHHHHHHHHHHHHTT-EEEEEESSCHHHHHHH-HTTE----EES---SHHHHHHH------SEEEE-
T ss_pred ccCCCEEEEEEE-cCCcCeEeeeeecCCceeEEecccCChhhhcc-cccc----eee---ehhhhcch-----hhhhhhh
Confidence 346899999996 99999999999999999999999887655344 4443 121 44445554 7999887
Q ss_pred CCh-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 230 VGG-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
... + .-...+..++++..+|+++.
T Consensus 99 ~plt~~T~~li~~~~l~~mk~ga~lvN~aR 128 (178)
T PF02826_consen 99 LPLTPETRGLINAEFLAKMKPGAVLVNVAR 128 (178)
T ss_dssp SSSSTTTTTSBSHHHHHTSTTTEEEEESSS
T ss_pred hccccccceeeeeeeeeccccceEEEeccc
Confidence 773 2 23567888999988888764
|
All contain a glycine-rich region located in the central section of these enzymes, this region corresponds to the NAD-binding domain. The catalytic domain is described in IPR006139 from INTERPRO ; GO: 0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor, 0048037 cofactor binding, 0055114 oxidation-reduction process; PDB: 3JTM_A 3NAQ_B 3N7U_J 3KB6_B 3GG9_A 1QP8_B 2CUK_C 2W2L_D 2W2K_A 1WWK_A .... |
| >PRK07453 protochlorophyllide oxidoreductase; Validated | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0016 Score=58.26 Aligned_cols=80 Identities=15% Similarity=0.199 Sum_probs=54.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC---C-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF---D-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+|++|++|.++++.+...|++|++++++.++.+.+.+++.. . . ..|..+...+.+.+.+.. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 84 (322)
T PRK07453 5 AKGTVIITGASSGVGLYAAKALAKRGWHVIMACRNLKKAEAAAQELGIPPDSYTIIHIDLGDLDSVRRFVDDFRALGKPL 84 (322)
T ss_pred CCCEEEEEcCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhccCCceEEEEecCCCHHHHHHHHHHHHHhCCCc
Confidence 467899999999999999988888899999999988876655434421 1 1 234444312222232221 2369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 85 D~li~nAg 92 (322)
T PRK07453 85 DALVCNAA 92 (322)
T ss_pred cEEEECCc
Confidence 99999988
|
|
| >COG4122 Predicted O-methyltransferase [General function prediction only] | Back alignment and domain information |
|---|
Probab=97.34 E-value=0.0034 Score=52.10 Aligned_cols=104 Identities=14% Similarity=0.168 Sum_probs=75.8
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHH---HcCCCe-eEecCCchhHHHHHHHHCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKN---KFGFDE-AFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~i~~~~~ 220 (342)
..+.....+||=.| +++|+.++.+|..+. .+++.+.+++++.+.+++ +.|.+. +.-.... +..+.+.+...
T Consensus 54 L~~~~~~k~iLEiG--T~~GySal~mA~~l~~~g~l~tiE~~~e~~~~A~~n~~~ag~~~~i~~~~~g-dal~~l~~~~~ 130 (219)
T COG4122 54 LARLSGPKRILEIG--TAIGYSALWMALALPDDGRLTTIERDEERAEIARENLAEAGVDDRIELLLGG-DALDVLSRLLD 130 (219)
T ss_pred HHHhcCCceEEEee--cccCHHHHHHHhhCCCCCeEEEEeCCHHHHHHHHHHHHHcCCcceEEEEecC-cHHHHHHhccC
Confidence 45667888899998 789999999999876 489999999998887774 346643 2222213 56666666444
Q ss_pred CCccEEE-eCCCh---hhHHHHHHhhhhCCEEEEEce
Q 019332 221 EGIDIYF-ENVGG---KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 ~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+.||+|| |+.-+ ..++.+++.|++||-++.=..
T Consensus 131 ~~fDliFIDadK~~yp~~le~~~~lLr~GGliv~DNv 167 (219)
T COG4122 131 GSFDLVFIDADKADYPEYLERALPLLRPGGLIVADNV 167 (219)
T ss_pred CCccEEEEeCChhhCHHHHHHHHHHhCCCcEEEEeec
Confidence 5799875 55544 478899999999999886443
|
|
| >PRK06194 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0013 Score=57.70 Aligned_cols=80 Identities=16% Similarity=0.278 Sum_probs=52.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHC--CCCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
+.++||+||+|++|..+++.+...|++|++++++.++.+.+.+++ +.. .+ .|..+..++.+.+.+.. .+.+|
T Consensus 6 ~k~vlVtGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id 85 (287)
T PRK06194 6 GKVAVITGAASGFGLAFARIGAALGMKLVLADVQQDALDRAVAELRAQGAEVLGVRTDVSDAAQVEALADAALERFGAVH 85 (287)
T ss_pred CCEEEEeCCccHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 578999999999999999988888999999998876654443233 321 11 23333312322222221 23689
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 86 ~vi~~Ag~ 93 (287)
T PRK06194 86 LLFNNAGV 93 (287)
T ss_pred EEEECCCC
Confidence 99999985
|
|
| >PRK05876 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.32 E-value=0.0012 Score=57.52 Aligned_cols=80 Identities=21% Similarity=0.334 Sum_probs=53.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+.+
T Consensus 5 ~~k~vlVTGas~gIG~ala~~La~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 84 (275)
T PRK05876 5 PGRGAVITGGASGIGLATGTEFARRGARVVLGDVDKPGLRQAVNHLRAEGFDVHGVMCDVRHREEVTHLADEAFRLLGHV 84 (275)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999988889999999998877665443233 321 1 234444312322222221 1368
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 85 d~li~nAg 92 (275)
T PRK05876 85 DVVFSNAG 92 (275)
T ss_pred CEEEECCC
Confidence 99999988
|
|
| >PRK09291 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.31 E-value=0.0017 Score=55.79 Aligned_cols=75 Identities=15% Similarity=0.258 Sum_probs=52.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHCCCCccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
+.++||+|++|++|..+++.+...|++|+++++++.+.+.+.+ ..+.. . ..|..+. +.+++...+++|++
T Consensus 2 ~~~vlVtGasg~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~id~v 77 (257)
T PRK09291 2 SKTILITGAGSGFGREVALRLARKGHNVIAGVQIAPQVTALRAEAARRGLALRVEKLDLTDA----IDRAQAAEWDVDVL 77 (257)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeeCCCH----HHHHHHhcCCCCEE
Confidence 3579999999999999999999999999999998776555432 22221 1 2344433 23343333479999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
|++.|
T Consensus 78 i~~ag 82 (257)
T PRK09291 78 LNNAG 82 (257)
T ss_pred EECCC
Confidence 99988
|
|
| >PRK08340 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0015 Score=56.35 Aligned_cols=78 Identities=23% Similarity=0.280 Sum_probs=52.5
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCe--eEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDE--AFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~--v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
++||+|+++++|.+.++.+...|++|+.+++++++.+.+.+++ +... ..|..+..++.+.+.+.. .+++|+++
T Consensus 2 ~vlItGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~g~id~li 81 (259)
T PRK08340 2 NVLVTASSRGIGFNVARELLKKGARVVISSRNEENLEKALKELKEYGEVYAVKADLSDKDDLKNLVKEAWELLGGIDALV 81 (259)
T ss_pred eEEEEcCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEcCCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 6899999999999999888888999999999887665444233 2112 234444323333333322 23699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
++.|.
T Consensus 82 ~naG~ 86 (259)
T PRK08340 82 WNAGN 86 (259)
T ss_pred ECCCC
Confidence 99874
|
|
| >PRK07024 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0022 Score=55.31 Aligned_cols=80 Identities=20% Similarity=0.197 Sum_probs=54.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----C-eeEecCCchhHHHHHHHHCC--CCccE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----D-EAFNYKEEPDLNEALKRYFP--EGIDI 225 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~i~~~~~--~~~d~ 225 (342)
+.++||+|++|++|.+.++.+...|++|++++++.++.+.+.+++.. . ..+|..+...+.+.+.+... +.+|+
T Consensus 2 ~~~vlItGas~gIG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~id~ 81 (257)
T PRK07024 2 PLKVFITGASSGIGQALAREYARQGATLGLVARRTDALQAFAARLPKAARVSVYAADVRDADALAAAAADFIAAHGLPDV 81 (257)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcccCCeeEEEEcCCCCHHHHHHHHHHHHHhCCCCCE
Confidence 35899999999999998888888899999999988877655533321 1 12344443233333333221 35899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 82 lv~~ag~ 88 (257)
T PRK07024 82 VIANAGI 88 (257)
T ss_pred EEECCCc
Confidence 9998873
|
|
| >PRK07523 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.30 E-value=0.0017 Score=55.91 Aligned_cols=81 Identities=19% Similarity=0.309 Sum_probs=54.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|.+.++.+...|++|+++.+++++.+.+.+++ |.. . ..|..+..++.+.+.+.. .+.+
T Consensus 9 ~~k~vlItGa~g~iG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 88 (255)
T PRK07523 9 TGRRALVTGSSQGIGYALAEGLAQAGAEVILNGRDPAKLAAAAESLKGQGLSAHALAFDVTDHDAVRAAIDAFEAEIGPI 88 (255)
T ss_pred CCCEEEEECCcchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 4679999999999999999988888999999999877654433222 321 1 134444323333333221 2368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++|.++|.
T Consensus 89 d~li~~ag~ 97 (255)
T PRK07523 89 DILVNNAGM 97 (255)
T ss_pred CEEEECCCC
Confidence 999999884
|
|
| >COG1748 LYS9 Saccharopine dehydrogenase and related proteins [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=97.28 E-value=0.0033 Score=56.73 Aligned_cols=95 Identities=16% Similarity=0.100 Sum_probs=68.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcC---C-CeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFG---F-DEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g---~-~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+|||.|+ |+||..+++.+...+ .+|++.+++.++.+.+. ... . ...+|-.+...+.+.|++ +|+||+
T Consensus 2 ~~ilviGa-G~Vg~~va~~la~~~d~~V~iAdRs~~~~~~i~-~~~~~~v~~~~vD~~d~~al~~li~~-----~d~VIn 74 (389)
T COG1748 2 MKILVIGA-GGVGSVVAHKLAQNGDGEVTIADRSKEKCARIA-ELIGGKVEALQVDAADVDALVALIKD-----FDLVIN 74 (389)
T ss_pred CcEEEECC-chhHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hhccccceeEEecccChHHHHHHHhc-----CCEEEE
Confidence 46899997 999999999988888 69999999999888887 443 2 234555543233333332 699999
Q ss_pred CCChhhHHHHH-HhhhhCCEEEEEceec
Q 019332 229 NVGGKMLDAVL-LNMKIHGRIAVCGMIS 255 (342)
Q Consensus 229 ~~g~~~~~~~~-~~l~~~G~~v~~g~~~ 255 (342)
|........++ .|++.+=.++.+....
T Consensus 75 ~~p~~~~~~i~ka~i~~gv~yvDts~~~ 102 (389)
T COG1748 75 AAPPFVDLTILKACIKTGVDYVDTSYYE 102 (389)
T ss_pred eCCchhhHHHHHHHHHhCCCEEEcccCC
Confidence 99984433444 6777777888876643
|
|
| >PRK11705 cyclopropane fatty acyl phospholipid synthase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0022 Score=58.60 Aligned_cols=104 Identities=18% Similarity=0.141 Sum_probs=71.4
Q ss_pred HHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC
Q 019332 140 AYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 140 a~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
.+..+.+..+++++++||-+|. |.|..+..+++..|++|++++.|++..+.+++.. ...-++.... ++. +.
T Consensus 155 k~~~l~~~l~l~~g~rVLDIGc--G~G~~a~~la~~~g~~V~giDlS~~~l~~A~~~~-~~l~v~~~~~-D~~----~l- 225 (383)
T PRK11705 155 KLDLICRKLQLKPGMRVLDIGC--GWGGLARYAAEHYGVSVVGVTISAEQQKLAQERC-AGLPVEIRLQ-DYR----DL- 225 (383)
T ss_pred HHHHHHHHhCCCCCCEEEEeCC--CccHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHh-ccCeEEEEEC-chh----hc-
Confidence 3444445567899999999994 6788889999988999999999999988888433 2111222111 221 11
Q ss_pred CCCccEEEeC-----CCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 220 PEGIDIYFEN-----VGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 ~~~~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
.+.+|.|+.. +|. ..+..+.+.|+|+|.++...
T Consensus 226 ~~~fD~Ivs~~~~ehvg~~~~~~~l~~i~r~LkpGG~lvl~~ 267 (383)
T PRK11705 226 NGQFDRIVSVGMFEHVGPKNYRTYFEVVRRCLKPDGLFLLHT 267 (383)
T ss_pred CCCCCEEEEeCchhhCChHHHHHHHHHHHHHcCCCcEEEEEE
Confidence 2468988642 332 35678888999999988653
|
|
| >PRK13394 3-hydroxybutyrate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0039 Score=53.74 Aligned_cols=81 Identities=16% Similarity=0.247 Sum_probs=53.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe-e--EecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE-A--FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~-v--~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|...++.+...|++|+++++++++.+.+.++ .+... . .|..+...+.+.+.+.. .+.+
T Consensus 6 ~~~~vlItGasg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 85 (262)
T PRK13394 6 NGKTAVVTGAASGIGKEIALELARAGAAVAIADLNQDGANAVADEINKAGGKAIGVAMDVTNEDAVNAGIDKVAERFGSV 85 (262)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHHHhcCceEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 367999999999999999999989999999999988665443322 33321 1 24444312222222211 1358
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.|.|.
T Consensus 86 d~vi~~ag~ 94 (262)
T PRK13394 86 DILVSNAGI 94 (262)
T ss_pred CEEEECCcc
Confidence 999998874
|
|
| >COG2242 CobL Precorrin-6B methylase 2 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=97.27 E-value=0.0041 Score=49.79 Aligned_cols=97 Identities=23% Similarity=0.368 Sum_probs=67.3
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCe--eEecCCchhHHHHHHHHCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDE--AFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~i~~~~~~ 221 (342)
..+++|+.++=.|+ |.|..+++++... ..+||++.++++..+.+++ +||.+. ++.-.. .+.+.+..
T Consensus 30 L~~~~g~~l~DIGa--GtGsi~iE~a~~~p~~~v~AIe~~~~a~~~~~~N~~~fg~~n~~vv~g~A----p~~L~~~~-- 101 (187)
T COG2242 30 LRPRPGDRLWDIGA--GTGSITIEWALAGPSGRVIAIERDEEALELIERNAARFGVDNLEVVEGDA----PEALPDLP-- 101 (187)
T ss_pred hCCCCCCEEEEeCC--CccHHHHHHHHhCCCceEEEEecCHHHHHHHHHHHHHhCCCcEEEEeccc----hHhhcCCC--
Confidence 46899998888885 4567777888544 3499999999988776653 678753 333322 23333221
Q ss_pred CccEEEeCCCh---hhHHHHHHhhhhCCEEEEEc
Q 019332 222 GIDIYFENVGG---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 222 ~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g 252 (342)
.+|.+|---|. ..++.++..|+++|++|.-.
T Consensus 102 ~~daiFIGGg~~i~~ile~~~~~l~~ggrlV~na 135 (187)
T COG2242 102 SPDAIFIGGGGNIEEILEAAWERLKPGGRLVANA 135 (187)
T ss_pred CCCEEEECCCCCHHHHHHHHHHHcCcCCeEEEEe
Confidence 48998865554 36788999999999998643
|
|
| >PRK08703 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.26 E-value=0.0028 Score=53.95 Aligned_cols=81 Identities=15% Similarity=0.242 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC-C---eeEecCC---c--hhHHHHHHHHC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF-D---EAFNYKE---E--PDLNEALKRYF 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~-~---~v~~~~~---~--~~~~~~i~~~~ 219 (342)
++.+++|+|++|++|...++.+...|++|+++++++++.+.+.+++ +. . ..+|..+ . ..+.+.+.+..
T Consensus 5 ~~k~vlItG~sggiG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~i~~~~ 84 (239)
T PRK08703 5 SDKTILVTGASQGLGEQVAKAYAAAGATVILVARHQKKLEKVYDAIVEAGHPEPFAIRFDLMSAEEKEFEQFAATIAEAT 84 (239)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHHHcCCCCcceEEeeecccchHHHHHHHHHHHHHh
Confidence 4579999999999999999888888999999999987765543232 21 1 1123221 1 12334444444
Q ss_pred CCCccEEEeCCCh
Q 019332 220 PEGIDIYFENVGG 232 (342)
Q Consensus 220 ~~~~d~vid~~g~ 232 (342)
.+.+|.+++++|.
T Consensus 85 ~~~id~vi~~ag~ 97 (239)
T PRK08703 85 QGKLDGIVHCAGY 97 (239)
T ss_pred CCCCCEEEEeccc
Confidence 3468999999883
|
|
| >PRK00377 cbiT cobalt-precorrin-6Y C(15)-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0078 Score=49.70 Aligned_cols=99 Identities=23% Similarity=0.329 Sum_probs=67.5
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHH---HcCC-CeeEecCCchhHHHHHHHHCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKN---KFGF-DEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~---~~g~-~~v~~~~~~~~~~~~i~~~~~ 220 (342)
...+.++++||-.|+ |. |..++.+++..+ .+|++++.+++..+.+++ .+|. +.+-... . +..+.+... .
T Consensus 35 ~l~~~~~~~vlDlG~-Gt-G~~s~~~a~~~~~~~~v~avD~~~~~~~~a~~n~~~~g~~~~v~~~~-~-d~~~~l~~~-~ 109 (198)
T PRK00377 35 KLRLRKGDMILDIGC-GT-GSVTVEASLLVGETGKVYAVDKDEKAINLTRRNAEKFGVLNNIVLIK-G-EAPEILFTI-N 109 (198)
T ss_pred HcCCCCcCEEEEeCC-cC-CHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHhCCCCCeEEEE-e-chhhhHhhc-C
Confidence 457889999999996 54 898999988764 599999999987776653 3552 3221111 1 332323322 2
Q ss_pred CCccEEEeCCCh----hhHHHHHHhhhhCCEEEE
Q 019332 221 EGIDIYFENVGG----KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 221 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~ 250 (342)
+.+|.||...+. ..+..+.++|+++|+++.
T Consensus 110 ~~~D~V~~~~~~~~~~~~l~~~~~~LkpgG~lv~ 143 (198)
T PRK00377 110 EKFDRIFIGGGSEKLKEIISASWEIIKKGGRIVI 143 (198)
T ss_pred CCCCEEEECCCcccHHHHHHHHHHHcCCCcEEEE
Confidence 369999985553 357778889999999875
|
|
| >PLN02253 xanthoxin dehydrogenase | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.0023 Score=55.85 Aligned_cols=81 Identities=16% Similarity=0.183 Sum_probs=53.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.+.++||+|++|++|.+.++.+...|++|+++++++++.+.+.++++. . . ..|..+...+.+.+.+... +++|
T Consensus 17 ~~k~~lItGas~gIG~~la~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~g~id 96 (280)
T PLN02253 17 LGKVALVTGGATGIGESIVRLFHKHGAKVCIVDLQDDLGQNVCDSLGGEPNVCFFHCDVTVEDDVSRAVDFTVDKFGTLD 96 (280)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhcCCCceEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 367899999999999998888888899999999877665544434432 1 1 2344443223332332211 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 97 ~li~~Ag~ 104 (280)
T PLN02253 97 IMVNNAGL 104 (280)
T ss_pred EEEECCCc
Confidence 99998874
|
|
| >PRK06179 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.25 E-value=0.001 Score=57.70 Aligned_cols=77 Identities=16% Similarity=0.324 Sum_probs=52.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid~ 229 (342)
+.+++|+|++|++|...++.+...|++|++++++.++.+.. .+.. ...|..+..++.+.+.+.. .+.+|+++++
T Consensus 4 ~~~vlVtGasg~iG~~~a~~l~~~g~~V~~~~r~~~~~~~~---~~~~~~~~D~~d~~~~~~~~~~~~~~~g~~d~li~~ 80 (270)
T PRK06179 4 SKVALVTGASSGIGRATAEKLARAGYRVFGTSRNPARAAPI---PGVELLELDVTDDASVQAAVDEVIARAGRIDVLVNN 80 (270)
T ss_pred CCEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCChhhcccc---CCCeeEEeecCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 46899999999999999988888899999999887654322 1222 2345555423444343332 2369999999
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
.|.
T Consensus 81 ag~ 83 (270)
T PRK06179 81 AGV 83 (270)
T ss_pred CCC
Confidence 984
|
|
| >PRK07677 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0018 Score=55.60 Aligned_cols=80 Identities=19% Similarity=0.237 Sum_probs=53.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-eeE--ecCCchhHHHHHHHHC--CCCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EAF--NYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v~--~~~~~~~~~~~i~~~~--~~~~d 224 (342)
+.++||+|++|++|.+.++.+...|++|+++++++++.+.+.+++ +.. ..+ |..+...+.+.+.+.. .+.+|
T Consensus 1 ~k~~lItG~s~giG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (252)
T PRK07677 1 EKVVIITGGSSGMGKAMAKRFAEEGANVVITGRTKEKLEEAKLEIEQFPGQVLTVQMDVRNPEDVQKMVEQIDEKFGRID 80 (252)
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCcc
Confidence 468999999999999999999889999999999887665544222 221 222 4444313333333322 13689
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++++.|.
T Consensus 81 ~lI~~ag~ 88 (252)
T PRK07677 81 ALINNAAG 88 (252)
T ss_pred EEEECCCC
Confidence 99999873
|
|
| >TIGR01832 kduD 2-deoxy-D-gluconate 3-dehydrogenase | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0021 Score=54.98 Aligned_cols=80 Identities=18% Similarity=0.250 Sum_probs=52.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.+.++||+|++|++|.+.++.+...|++|+++++++.. .+.+. +.+.. . ..|..+..++...+.+... +++|
T Consensus 4 ~~k~vlItGas~gIG~~ia~~l~~~G~~vi~~~r~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d 82 (248)
T TIGR01832 4 EGKVALVTGANTGLGQGIAVGLAEAGADIVGAGRSEPSETQQQVE-ALGRRFLSLTADLSDIEAIKALVDSAVEEFGHID 82 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHH-hcCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999998888899999999986521 12233 34431 1 2344443233333333221 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 83 ~li~~ag~ 90 (248)
T TIGR01832 83 ILVNNAGI 90 (248)
T ss_pred EEEECCCC
Confidence 99998874
|
This model describes 2-deoxy-D-gluconate 3-dehydrogenase (also called 2-keto-3-deoxygluconate oxidoreductase), a member of the family of short-chain-alcohol dehydrogenases (pfam00106). This protein has been characterized in Erwinia chrysanthemi as an enzyme of pectin degradation. |
| >PRK06197 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.0018 Score=57.49 Aligned_cols=80 Identities=19% Similarity=0.240 Sum_probs=52.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~~--~ 221 (342)
.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++ +.. . .+|..+..++.+.+.+... +
T Consensus 15 ~~k~vlItGas~gIG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~ 94 (306)
T PRK06197 15 SGRVAVVTGANTGLGYETAAALAAKGAHVVLAVRNLDKGKAAAARITAATPGADVTLQELDLTSLASVRAAADALRAAYP 94 (306)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHhhCC
Confidence 5679999999999999999888888999999999877654332222 111 1 2344443123333333221 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 95 ~iD~li~nAg 104 (306)
T PRK06197 95 RIDLLINNAG 104 (306)
T ss_pred CCCEEEECCc
Confidence 6999999987
|
|
| >PRK08589 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.23 E-value=0.002 Score=56.01 Aligned_cols=80 Identities=19% Similarity=0.261 Sum_probs=52.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|+++++|.+.++.+...|++|++++++ ++.+.+.+++ +.. ..+|..+..+....+.+.. .+.+
T Consensus 5 ~~k~vlItGas~gIG~aia~~l~~~G~~vi~~~r~-~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 83 (272)
T PRK08589 5 ENKVAVITGASTGIGQASAIALAQEGAYVLAVDIA-EAVSETVDKIKSNGGKAKAYHVDISDEQQVKDFASEIKEQFGRV 83 (272)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCc-HHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 46799999999999999998888889999999988 4443322133 321 1244444322333333222 1368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (272)
T PRK08589 84 DVLFNNAGV 92 (272)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK08217 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0028 Score=54.31 Aligned_cols=80 Identities=14% Similarity=0.282 Sum_probs=53.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
++.++||+|++|++|..+++.+...|++|+.+++++++.+.+.++ .+.. . ..|..+.....+.+..... +.+
T Consensus 4 ~~~~~lItG~~g~iG~~~a~~l~~~G~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (253)
T PRK08217 4 KDKVIVITGGAQGLGRAMAEYLAQKGAKLALIDLNQEKLEEAVAECGALGTEVRGYAANVTDEEDVEATFAQIAEDFGQL 83 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999988999999999988765544322 2332 1 2333333123222332221 368
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|.+++++|
T Consensus 84 d~vi~~ag 91 (253)
T PRK08217 84 NGLINNAG 91 (253)
T ss_pred CEEEECCC
Confidence 99999987
|
|
| >KOG1210 consensus Predicted 3-ketosphinganine reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.22 E-value=0.0019 Score=55.62 Aligned_cols=84 Identities=23% Similarity=0.230 Sum_probs=60.4
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee---EecCCchhH-----HHH-HHHH
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA---FNYKEEPDL-----NEA-LKRY 218 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v---~~~~~~~~~-----~~~-i~~~ 218 (342)
.+.++...++|+|+++|+|++.+.-++..|++|..++++.+|+..+++.++.... +.+... |+ .+. +++.
T Consensus 28 ~~~k~~~hi~itggS~glgl~la~e~~~~ga~Vti~ar~~~kl~~a~~~l~l~~~~~~v~~~S~-d~~~Y~~v~~~~~~l 106 (331)
T KOG1210|consen 28 VKPKPRRHILITGGSSGLGLALALECKREGADVTITARSGKKLLEAKAELELLTQVEDVSYKSV-DVIDYDSVSKVIEEL 106 (331)
T ss_pred cccCccceEEEecCcchhhHHHHHHHHHccCceEEEeccHHHHHHHHhhhhhhhccceeeEecc-ccccHHHHHHHHhhh
Confidence 3445668899999999999999999999999999999999999888866665221 112211 21 222 2222
Q ss_pred C--CCCccEEEeCCCh
Q 019332 219 F--PEGIDIYFENVGG 232 (342)
Q Consensus 219 ~--~~~~d~vid~~g~ 232 (342)
- .+.+|.+|.|+|.
T Consensus 107 ~~~~~~~d~l~~cAG~ 122 (331)
T KOG1210|consen 107 RDLEGPIDNLFCCAGV 122 (331)
T ss_pred hhccCCcceEEEecCc
Confidence 1 2368999999994
|
|
| >PRK08862 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0024 Score=53.98 Aligned_cols=80 Identities=11% Similarity=0.207 Sum_probs=54.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHH---HHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLN---EALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~---~~i~~~~~~~ 222 (342)
.+.+++|+|+++++|.+.+..+...|++|+.+.+++++.+.+.++ .+.. . .+|..+..++. +.+.+..++.
T Consensus 4 ~~k~~lVtGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~ 83 (227)
T PRK08862 4 KSSIILITSAGSVLGRTISCHFARLGATLILCDQDQSALKDTYEQCSALTDNVYSFQLKDFSQESIRHLFDAIEQQFNRA 83 (227)
T ss_pred CCeEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCCeEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 467999999999999998888888999999999988876554322 2432 1 12333331232 2333323326
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|+++++.|
T Consensus 84 iD~li~nag 92 (227)
T PRK08862 84 PDVLVNNWT 92 (227)
T ss_pred CCEEEECCc
Confidence 999999986
|
|
| >PRK06483 dihydromonapterin reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0027 Score=53.93 Aligned_cols=79 Identities=14% Similarity=0.163 Sum_probs=52.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHcCCCe-eEecCCchhHHHHHHHHCC--CCccEEEe
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI-DLLKNKFGFDE-AFNYKEEPDLNEALKRYFP--EGIDIYFE 228 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~-~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~--~~~d~vid 228 (342)
+.++||+|+++++|.+.++.+...|++|+++++++++. +.++ +.+... ..|..+..+..+.+.+... +++|++++
T Consensus 2 ~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~lv~ 80 (236)
T PRK06483 2 PAPILITGAGQRIGLALAWHLLAQGQPVIVSYRTHYPAIDGLR-QAGAQCIQADFSTNAGIMAFIDELKQHTDGLRAIIH 80 (236)
T ss_pred CceEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchhHHHHHH-HcCCEEEEcCCCCHHHHHHHHHHHHhhCCCccEEEE
Confidence 35899999999999999998888999999999876543 3333 445421 2344333133333333222 35999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 81 ~ag~ 84 (236)
T PRK06483 81 NASD 84 (236)
T ss_pred CCcc
Confidence 8873
|
|
| >PRK06953 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.21 E-value=0.0033 Score=52.84 Aligned_cols=78 Identities=18% Similarity=0.196 Sum_probs=54.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
.+++|+|++|++|...++.+...|++|+.++++.++.+.++ ..+.. ...|..+...+...+.+...+.+|+++.+.|.
T Consensus 2 ~~vlvtG~sg~iG~~la~~L~~~G~~v~~~~r~~~~~~~~~-~~~~~~~~~D~~~~~~v~~~~~~~~~~~~d~vi~~ag~ 80 (222)
T PRK06953 2 KTVLIVGASRGIGREFVRQYRADGWRVIATARDAAALAALQ-ALGAEALALDVADPASVAGLAWKLDGEALDAAVYVAGV 80 (222)
T ss_pred ceEEEEcCCCchhHHHHHHHHhCCCEEEEEECCHHHHHHHH-hccceEEEecCCCHHHHHHHHHHhcCCCCCEEEECCCc
Confidence 47999999999999988888778999999999888777666 55543 23444444123332223322369999998774
|
|
| >PRK07774 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0023 Score=54.72 Aligned_cols=81 Identities=15% Similarity=0.180 Sum_probs=52.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|++|++|...++.+...|++|+++.+++++.+.+.+++ +.. ...|..+...+.+.+.+.. .+.+
T Consensus 5 ~~k~vlItGasg~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 84 (250)
T PRK07774 5 DDKVAIVTGAAGGIGQAYAEALAREGASVVVADINAEGAERVAKQIVADGGTAIAVQVDVSDPDSAKAMADATVSAFGGI 84 (250)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 4578999999999999999988888999999999876554443222 211 1234443312222222221 1259
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++|.++|.
T Consensus 85 d~vi~~ag~ 93 (250)
T PRK07774 85 DYLVNNAAI 93 (250)
T ss_pred CEEEECCCC
Confidence 999999883
|
|
| >PRK07067 sorbitol dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0026 Score=54.80 Aligned_cols=79 Identities=19% Similarity=0.280 Sum_probs=54.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
+.++||+|++|++|...++.+...|++|+.++++.++.+.+.++++.. . ..|..+...+.+.+.+.. .+.+|+++
T Consensus 6 ~~~vlItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li 85 (257)
T PRK07067 6 GKVALLTGAASGIGEAVAERYLAEGARVVIADIKPARARLAALEIGPAAIAVSLDVTRQDSIDRIVAAAVERFGGIDILF 85 (257)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 578999999999999999999888999999999888776655344421 1 123333313333333221 13689999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
.+.|
T Consensus 86 ~~ag 89 (257)
T PRK07067 86 NNAA 89 (257)
T ss_pred ECCC
Confidence 9887
|
|
| >PRK06482 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0025 Score=55.49 Aligned_cols=79 Identities=23% Similarity=0.303 Sum_probs=54.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
.++||+|++|++|...++.+...|++|+++.+++++.+.+++..+.. . ..|..+...+.+.+.+.. .+++|++|.
T Consensus 3 k~vlVtGasg~IG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~vi~ 82 (276)
T PRK06482 3 KTWFITGASSGFGRGMTERLLARGDRVAATVRRPDALDDLKARYGDRLWVLQLDVTDSAAVRAVVDRAFAALGRIDVVVS 82 (276)
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 47999999999999988888888999999999988777665333321 1 234444312333333322 136899999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 83 ~ag~ 86 (276)
T PRK06482 83 NAGY 86 (276)
T ss_pred CCCC
Confidence 9873
|
|
| >PRK08594 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.20 E-value=0.0065 Score=52.40 Aligned_cols=105 Identities=8% Similarity=0.048 Sum_probs=64.8
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCCh---hhHHHHHHHcC-CC---eeEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKIDLLKNKFG-FD---EAFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~---~~~~~~~~~~g-~~---~v~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.+++|+|++ +++|.++++.+...|++|+.+.++. ++.+.+.+++. .. ..+|-.+..+..+.+.+...
T Consensus 6 ~~k~~lItGa~~s~GIG~aia~~la~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 85 (257)
T PRK08594 6 EGKTYVVMGVANKRSIAWGIARSLHNAGAKLVFTYAGERLEKEVRELADTLEGQESLLLPCDVTSDEEITACFETIKEEV 85 (257)
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEecCcccchHHHHHHHHHcCCCceEEEecCCCCHHHHHHHHHHHHHhC
Confidence 46799999997 7999998888888999999887543 33444432442 11 12344443233333333221
Q ss_pred CCccEEEeCCCh-h--------------h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 221 EGIDIYFENVGG-K--------------M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 221 ~~~d~vid~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+.+|++++++|. . . ....++.++++|+++.+++...
T Consensus 86 g~ld~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~g~Iv~isS~~~ 151 (257)
T PRK08594 86 GVIHGVAHCIAFANKEDLRGEFLETSRDGFLLAQNISAYSLTAVAREAKKLMTEGGSIVTLTYLGG 151 (257)
T ss_pred CCccEEEECcccCCCCcCCCccccCCHHHHHHHHhhhHHHHHHHHHHHHHhcccCceEEEEcccCC
Confidence 469999998763 1 0 1123445566799998887544
|
|
| >PRK08251 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0024 Score=54.63 Aligned_cols=79 Identities=20% Similarity=0.313 Sum_probs=52.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
+.++||+|++|++|...++.+...|++|+++++++++.+.+.+.+ +.. . ..|..+...+.+.+.+.. .++
T Consensus 2 ~k~vlItGas~giG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (248)
T PRK08251 2 RQKILITGASSGLGAGMAREFAAKGRDLALCARRTDRLEELKAELLARYPGIKVAVAALDVNDHDQVFEVFAEFRDELGG 81 (248)
T ss_pred CCEEEEECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 468999999999999888888888999999999887765543222 211 1 234444423333333322 136
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|+++.+.|
T Consensus 82 id~vi~~ag 90 (248)
T PRK08251 82 LDRVIVNAG 90 (248)
T ss_pred CCEEEECCC
Confidence 999999987
|
|
| >PRK09242 tropinone reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.19 E-value=0.0023 Score=55.12 Aligned_cols=81 Identities=22% Similarity=0.316 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+|++|++|..+++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++...+.+.. .+
T Consensus 8 ~~k~~lItGa~~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 87 (257)
T PRK09242 8 DGQTALITGASKGIGLAIAREFLGLGADVLIVARDADALAQARDELAEEFPEREVHGLAADVSDDEDRRAILDWVEDHWD 87 (257)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHHHcC
Confidence 4679999999999999999999889999999999887665444232 221 1 124444312222222221 13
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|+++.+.|.
T Consensus 88 ~id~li~~ag~ 98 (257)
T PRK09242 88 GLHILVNNAGG 98 (257)
T ss_pred CCCEEEECCCC
Confidence 69999999984
|
|
| >PRK07985 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0046 Score=54.48 Aligned_cols=105 Identities=12% Similarity=0.090 Sum_probs=64.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh--hhHHHHHH---HcCCC---eeEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~--~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||++++|.+.++.+...|++|+++.++. ++.+.+.+ +.+.. ...|..+...+.+.+.+.. .+
T Consensus 48 ~~k~vlITGas~gIG~aia~~L~~~G~~Vi~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g 127 (294)
T PRK07985 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAISYLPVEEEDAQDVKKIIEECGRKAVLLPGDLSDEKFARSLVHEAHKALG 127 (294)
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEecCCcchhhHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHhC
Confidence 457899999999999999998888999999877543 22232321 22321 1234444323333333322 13
Q ss_pred CccEEEeCCChh---------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 222 GIDIYFENVGGK---------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++|+++++.|.. .+..+++.++.+|+++.+++...
T Consensus 128 ~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~iv~iSS~~~ 189 (294)
T PRK07985 128 GLDIMALVAGKQVAIPDIADLTSEQFQKTFAINVFALFWLTQEAIPLLPKGASIITTSSIQA 189 (294)
T ss_pred CCCEEEECCCCCcCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhhcCCEEEEECCchh
Confidence 689999987731 11233445566789998887544
|
|
| >PRK07035 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.18 E-value=0.0024 Score=54.78 Aligned_cols=80 Identities=19% Similarity=0.297 Sum_probs=53.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHCC--CCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
+.++||+|++|++|.+.++.+...|++|+.++++.++.+.+.+++ +.. .. .|..+..+....+.+... +.+|
T Consensus 8 ~k~vlItGas~gIG~~l~~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 87 (252)
T PRK07035 8 GKIALVTGASRGIGEAIAKLLAQQGAHVIVSSRKLDGCQAVADAIVAAGGKAEALACHIGEMEQIDALFAHIRERHGRLD 87 (252)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 568999999999999999999889999999999877665444332 221 11 244433123222332221 2589
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++++.|.
T Consensus 88 ~li~~ag~ 95 (252)
T PRK07035 88 ILVNNAAA 95 (252)
T ss_pred EEEECCCc
Confidence 99998873
|
|
| >PRK08643 acetoin reductase; Validated | Back alignment and domain information |
|---|
Probab=97.17 E-value=0.0021 Score=55.29 Aligned_cols=80 Identities=11% Similarity=0.147 Sum_probs=53.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
+.++||+|++|++|...++.+...|++|++++++.++.+.+..++ +.. ...|..+...+.+.+.+.. .+++|
T Consensus 2 ~k~~lItGas~giG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 81 (256)
T PRK08643 2 SKVALVTGAGQGIGFAIAKRLVEDGFKVAIVDYNEETAQAAADKLSKDGGKAIAVKADVSDRDQVFAAVRQVVDTFGDLN 81 (256)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 468999999999999999999889999999999887655443232 221 1234444322333333221 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++.++|.
T Consensus 82 ~vi~~ag~ 89 (256)
T PRK08643 82 VVVNNAGV 89 (256)
T ss_pred EEEECCCC
Confidence 99999874
|
|
| >PF02353 CMAS: Mycolic acid cyclopropane synthetase; InterPro: IPR003333 This entry represents mycolic acid cyclopropane synthases and related enzymes, including CmaA1, CmaA2 (cyclopropane mycolic acid synthase A1 and A2) and MmaA1-4 (methoxymycolic acid synthase A1-4) | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0014 Score=56.92 Aligned_cols=98 Identities=20% Similarity=0.288 Sum_probs=61.0
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe--eEecCCchhHHHHHHHH
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE--AFNYKEEPDLNEALKRY 218 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~i~~~ 218 (342)
+.+..++++|++||-+| .|.|-.++.+|+..|++|++++.|+++.+.+++ +.|... .+... ++ ++.
T Consensus 54 ~~~~~~l~~G~~vLDiG--cGwG~~~~~~a~~~g~~v~gitlS~~Q~~~a~~~~~~~gl~~~v~v~~~---D~----~~~ 124 (273)
T PF02353_consen 54 LCEKLGLKPGDRVLDIG--CGWGGLAIYAAERYGCHVTGITLSEEQAEYARERIREAGLEDRVEVRLQ---DY----RDL 124 (273)
T ss_dssp HHTTTT--TT-EEEEES---TTSHHHHHHHHHH--EEEEEES-HHHHHHHHHHHHCSTSSSTEEEEES----G----GG-
T ss_pred HHHHhCCCCCCEEEEeC--CCccHHHHHHHHHcCcEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEe---ec----ccc
Confidence 34567899999999999 568999999999999999999999998888764 234321 11111 11 111
Q ss_pred CCCCccEEEe-----CCCh----hhHHHHHHhhhhCCEEEEE
Q 019332 219 FPEGIDIYFE-----NVGG----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 219 ~~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~ 251 (342)
. +.+|.|+. .+|. ..+..+.+.|+|+|+++.-
T Consensus 125 ~-~~fD~IvSi~~~Ehvg~~~~~~~f~~~~~~LkpgG~~~lq 165 (273)
T PF02353_consen 125 P-GKFDRIVSIEMFEHVGRKNYPAFFRKISRLLKPGGRLVLQ 165 (273)
T ss_dssp ---S-SEEEEESEGGGTCGGGHHHHHHHHHHHSETTEEEEEE
T ss_pred C-CCCCEEEEEechhhcChhHHHHHHHHHHHhcCCCcEEEEE
Confidence 1 15888753 4442 2477888999999998743
|
All are thought to be S-adenosyl-L-methionine (SAM) utilising methyltransferases []. Mycolic acid cyclopropane synthase or cyclopropane-fatty-acyl-phospholipid synthase (CFA synthase) 2.1.1.79 from EC catalyses the reaction: |
| >PRK12937 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.16 E-value=0.0071 Score=51.50 Aligned_cols=81 Identities=16% Similarity=0.135 Sum_probs=49.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
++.++||+|++|++|...++.+...|++|+.+.++.. +.+.+.+ ..+.. .. .|..+..++.+.+++.. .++
T Consensus 4 ~~~~vlItG~~~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (245)
T PRK12937 4 SNKVAIVTGASRGIGAAIARRLAADGFAVAVNYAGSAAAADELVAEIEAAGGRAIAVQADVADAAAVTRLFDAAETAFGR 83 (245)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4578999999999999999999989999888776543 2222221 22321 11 23333312333333221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++.++|.
T Consensus 84 id~vi~~ag~ 93 (245)
T PRK12937 84 IDVLVNNAGV 93 (245)
T ss_pred CCEEEECCCC
Confidence 9999998883
|
|
| >PRK07370 enoyl-(acyl carrier protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0048 Score=53.25 Aligned_cols=105 Identities=11% Similarity=0.104 Sum_probs=63.4
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChh------hHHHHHHHcCCCe--eEecCCchhHHHHHHHHC--
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD------KIDLLKNKFGFDE--AFNYKEEPDLNEALKRYF-- 219 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~------~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~-- 219 (342)
.+.+++|+|++ +++|.+.++.+...|++|+.+.++.+ ..+.+.++.+... .+|..+.....+.+.+..
T Consensus 5 ~~k~~lItGas~~~GIG~aia~~la~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~ 84 (258)
T PRK07370 5 TGKKALVTGIANNRSIAWGIAQQLHAAGAELGITYLPDEKGRFEKKVRELTEPLNPSLFLPCDVQDDAQIEETFETIKQK 84 (258)
T ss_pred CCcEEEEeCCCCCCchHHHHHHHHHHCCCEEEEEecCcccchHHHHHHHHHhccCcceEeecCcCCHHHHHHHHHHHHHH
Confidence 46789999985 79999999888889999988764322 2222321111111 234444323333333222
Q ss_pred CCCccEEEeCCChh--------h----------------------HHHHHHhhhhCCEEEEEceecc
Q 019332 220 PEGIDIYFENVGGK--------M----------------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 220 ~~~~d~vid~~g~~--------~----------------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.+.+|++++++|.. . ...+++.++.+|+++.+++...
T Consensus 85 ~g~iD~lv~nag~~~~~~~~~~~~~~~~~~~~~~~~iN~~~~~~l~~~~~~~m~~~g~Iv~isS~~~ 151 (258)
T PRK07370 85 WGKLDILVHCLAFAGKEELIGDFSATSREGFARALEISAYSLAPLCKAAKPLMSEGGSIVTLTYLGG 151 (258)
T ss_pred cCCCCEEEEcccccCcccccCcchhhCHHHHHHHheeeeHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 13699999998731 0 1335556777899998877544
|
|
| >PRK06505 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.15 E-value=0.0031 Score=54.88 Aligned_cols=81 Identities=11% Similarity=0.108 Sum_probs=52.0
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhH---HHHHHHcCCCee--EecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKI---DLLKNKFGFDEA--FNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~---~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+|+++ ++|.+.++.+...|++|+++.++++.. +.+.+++|.... .|-.+..+..+.+.+... |.
T Consensus 6 ~~k~~lVTGas~~~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~g~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 85 (271)
T PRK06505 6 QGKRGLIMGVANDHSIAWGIAKQLAAQGAELAFTYQGEALGKRVKPLAESLGSDFVLPCDVEDIASVDAVFEALEKKWGK 85 (271)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHhCCCEEEEecCchHHHHHHHHHHHhcCCceEEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 467899999986 999999998888999999988765322 222223453222 344443223333333221 46
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 86 iD~lVnnAG~ 95 (271)
T PRK06505 86 LDFVVHAIGF 95 (271)
T ss_pred CCEEEECCcc
Confidence 9999999883
|
|
| >TIGR00406 prmA ribosomal protein L11 methyltransferase | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.0034 Score=55.09 Aligned_cols=147 Identities=16% Similarity=0.199 Sum_probs=83.5
Q ss_pred CCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchhhccCCchhhHH--HhhhhhcCCCCCCEEEEecCCcHHHHH
Q 019332 91 PEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAY--AGFYEVCSPKQGECVFISAASGAVGQL 168 (342)
Q Consensus 91 ~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~--~al~~~~~~~~~~~vlI~ga~g~vG~~ 168 (342)
..+++|++.+...+|.++-.-+....+.+ ... +.+-.+. ...|.. ..+.. ...++++||-.|. |. |..
T Consensus 104 ~p~~~g~~~~i~p~w~~~~~~~~~~~i~l-dpg--~aFgtG~---h~tt~l~l~~l~~--~~~~g~~VLDvGc-Gs-G~l 173 (288)
T TIGR00406 104 HPVQFGKRFWICPSWRDVPSDEDALIIML-DPG--LAFGTGT---HPTTSLCLEWLED--LDLKDKNVIDVGC-GS-GIL 173 (288)
T ss_pred CCEEEcCeEEEECCCcCCCCCCCcEEEEE-CCC--CcccCCC---CHHHHHHHHHHHh--hcCCCCEEEEeCC-Ch-hHH
Confidence 34678888887777765533233335555 333 3331111 122222 22211 2457899999995 44 877
Q ss_pred HHHHHHHcCC-EEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh----hHHHHHH
Q 019332 169 VGQFAKLLGC-YVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK----MLDAVLL 240 (342)
Q Consensus 169 ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~----~~~~~~~ 240 (342)
++.+++ .|+ +|++++.++...+.+++.. +....+..... + ......+.+|+|+...... .+..+.+
T Consensus 174 ai~aa~-~g~~~V~avDid~~al~~a~~n~~~n~~~~~~~~~~~-~----~~~~~~~~fDlVvan~~~~~l~~ll~~~~~ 247 (288)
T TIGR00406 174 SIAALK-LGAAKVVGIDIDPLAVESARKNAELNQVSDRLQVKLI-Y----LEQPIEGKADVIVANILAEVIKELYPQFSR 247 (288)
T ss_pred HHHHHH-cCCCeEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-c----cccccCCCceEEEEecCHHHHHHHHHHHHH
Confidence 777665 466 9999999988776666322 22111111111 1 1112234799998655432 4566788
Q ss_pred hhhhCCEEEEEce
Q 019332 241 NMKIHGRIAVCGM 253 (342)
Q Consensus 241 ~l~~~G~~v~~g~ 253 (342)
+|+++|.++..|.
T Consensus 248 ~LkpgG~li~sgi 260 (288)
T TIGR00406 248 LVKPGGWLILSGI 260 (288)
T ss_pred HcCCCcEEEEEeC
Confidence 9999999998765
|
Ribosomal protein L11 methyltransferase is an S-adenosyl-L-methionine-dependent methyltransferase required for the modification of ribosomal protein L11. This protein is found in bacteria and (with a probable transit peptide) in Arabidopsis. |
| >PRK08213 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.14 E-value=0.003 Score=54.46 Aligned_cols=81 Identities=21% Similarity=0.344 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+|++|++|...++.+...|++|++++++.++.+.+.+.+ +.. ...|..+...+.+.+.+... +.+
T Consensus 11 ~~k~ilItGa~g~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~i~~~~~~~~~~~~Dl~d~~~i~~~~~~~~~~~~~i 90 (259)
T PRK08213 11 SGKTALVTGGSRGLGLQIAEALGEAGARVVLSARKAEELEEAAAHLEALGIDALWIAADVADEADIERLAEETLERFGHV 90 (259)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999888889999999999887765544222 221 12344443233222222211 358
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|.++.++|.
T Consensus 91 d~vi~~ag~ 99 (259)
T PRK08213 91 DILVNNAGA 99 (259)
T ss_pred CEEEECCCC
Confidence 999999873
|
|
| >PRK05875 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.13 E-value=0.0036 Score=54.52 Aligned_cols=80 Identities=13% Similarity=0.110 Sum_probs=53.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC-----CC-ee--EecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG-----FD-EA--FNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g-----~~-~v--~~~~~~~~~~~~i~~~~~--~ 221 (342)
++.++||+|++|++|.++++.+...|++|++++++.++.+...+++. .. .+ .|..+..++...+++... +
T Consensus 6 ~~k~vlItGasg~IG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 85 (276)
T PRK05875 6 QDRTYLVTGGGSGIGKGVAAGLVAAGAAVMIVGRNPDKLAAAAEEIEALKGAGAVRYEPADVTDEDQVARAVDAATAWHG 85 (276)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhccCCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35799999999999999999998899999999988766544332321 11 12 243333133333333321 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++|.++|
T Consensus 86 ~~d~li~~ag 95 (276)
T PRK05875 86 RLHGVVHCAG 95 (276)
T ss_pred CCCEEEECCC
Confidence 6899999887
|
|
| >PRK06079 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.12 E-value=0.0026 Score=54.69 Aligned_cols=80 Identities=14% Similarity=0.101 Sum_probs=51.4
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe----eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE----AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~----v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+||+ +++|.+.++.+...|++|+++.++++..+.++ ++.... .+|..+..+..+.+.+.. .+.+
T Consensus 6 ~~k~~lItGas~~~gIG~a~a~~la~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 84 (252)
T PRK06079 6 SGKKIVVMGVANKRSIAWGCAQAIKDQGATVIYTYQNDRMKKSLQ-KLVDEEDLLVECDVASDESIERAFATIKERVGKI 84 (252)
T ss_pred CCCEEEEeCCCCCCchHHHHHHHHHHCCCEEEEecCchHHHHHHH-hhccCceeEEeCCCCCHHHHHHHHHHHHHHhCCC
Confidence 46799999998 79999988888889999999988744333344 332211 134444312333332222 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 85 D~lv~nAg~ 93 (252)
T PRK06079 85 DGIVHAIAY 93 (252)
T ss_pred CEEEEcccc
Confidence 999998873
|
|
| >PRK06720 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0039 Score=50.04 Aligned_cols=81 Identities=14% Similarity=0.229 Sum_probs=51.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+||++++|.+.+..+...|++|+++.+++++.+.+.+++ +.. .. .|..+..++.+.+.+.. .|++
T Consensus 15 ~gk~~lVTGa~~GIG~aia~~l~~~G~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~v~~~~~~~G~i 94 (169)
T PRK06720 15 AGKVAIVTGGGIGIGRNTALLLAKQGAKVIVTDIDQESGQATVEEITNLGGEALFVSYDMEKQGDWQRVISITLNAFSRI 94 (169)
T ss_pred CCCEEEEecCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999988888888999999998876554332122 332 12 23333212222222211 2368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 95 DilVnnAG~ 103 (169)
T PRK06720 95 DMLFQNAGL 103 (169)
T ss_pred CEEEECCCc
Confidence 999988873
|
|
| >PRK06172 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0029 Score=54.34 Aligned_cols=81 Identities=14% Similarity=0.181 Sum_probs=53.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+|++|++|...++.+...|++|+.+++++++.+.+.+ +.+.. . ..|..+..++.+.+.+.. .+.+
T Consensus 6 ~~k~ilItGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 85 (253)
T PRK06172 6 SGKVALVTGGAAGIGRATALAFAREGAKVVVADRDAAGGEETVALIREAGGEALFVACDVTRDAEVKALVEQTIAAYGRL 85 (253)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCCC
Confidence 46799999999999999988888889999999998876544332 22321 1 133333312222222221 1368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++++.|.
T Consensus 86 d~li~~ag~ 94 (253)
T PRK06172 86 DYAFNNAGI 94 (253)
T ss_pred CEEEECCCC
Confidence 999998874
|
|
| >PRK08063 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0068 Score=51.85 Aligned_cols=81 Identities=15% Similarity=0.224 Sum_probs=50.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
++.++||+||+|++|...++.+...|++|++. .++.++.+.+.+ ..+.. .. .|..+..++...+.+.. .+.
T Consensus 3 ~~~~vlItGa~g~iG~~~a~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (250)
T PRK08063 3 SGKVALVTGSSRGIGKAIALRLAEEGYDIAVNYARSRKAAEETAEEIEALGRKALAVKANVGDVEKIKEMFAQIDEEFGR 82 (250)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 45789999999999999999998899998764 556555433321 23332 11 33333323333333322 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++++.|.
T Consensus 83 id~vi~~ag~ 92 (250)
T PRK08063 83 LDVFVNNAAS 92 (250)
T ss_pred CCEEEECCCC
Confidence 8999998873
|
|
| >CHL00194 ycf39 Ycf39; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.005 Score=54.94 Aligned_cols=94 Identities=18% Similarity=0.212 Sum_probs=62.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|||+||+|-+|..+++.+...|.+|++.+++.++...+. ..++..+ .|..+. +.+.+... ++|+||++++..
T Consensus 2 kIlVtGatG~iG~~lv~~Ll~~g~~V~~l~R~~~~~~~l~-~~~v~~v~~Dl~d~----~~l~~al~-g~d~Vi~~~~~~ 75 (317)
T CHL00194 2 SLLVIGATGTLGRQIVRQALDEGYQVRCLVRNLRKASFLK-EWGAELVYGDLSLP----ETLPPSFK-GVTAIIDASTSR 75 (317)
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCeEEEEEcChHHhhhHh-hcCCEEEECCCCCH----HHHHHHHC-CCCEEEECCCCC
Confidence 6999999999999999988888999999999877655554 4555322 233333 22333332 489999987641
Q ss_pred -------------hHHHHHHhhhhCC--EEEEEcee
Q 019332 234 -------------MLDAVLLNMKIHG--RIAVCGMI 254 (342)
Q Consensus 234 -------------~~~~~~~~l~~~G--~~v~~g~~ 254 (342)
....+++.++..| +++.++..
T Consensus 76 ~~~~~~~~~~~~~~~~~l~~aa~~~gvkr~I~~Ss~ 111 (317)
T CHL00194 76 PSDLYNAKQIDWDGKLALIEAAKAAKIKRFIFFSIL 111 (317)
T ss_pred CCCccchhhhhHHHHHHHHHHHHHcCCCEEEEeccc
Confidence 0123445555544 88887764
|
|
| >PLN00141 Tic62-NAD(P)-related group II protein; Provisional | Back alignment and domain information |
|---|
Probab=97.11 E-value=0.0083 Score=51.52 Aligned_cols=100 Identities=15% Similarity=0.116 Sum_probs=62.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH-cCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK-FGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~-~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+.+|||+||+|.+|..+++.+...|++|++..++.++....... .++.. ..|..+. .+.+.+....++|++|.+.
T Consensus 17 ~~~ilItGasG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~Dl~d~---~~~l~~~~~~~~d~vi~~~ 93 (251)
T PLN00141 17 TKTVFVAGATGRTGKRIVEQLLAKGFAVKAGVRDVDKAKTSLPQDPSLQIVRADVTEG---SDKLVEAIGDDSDAVICAT 93 (251)
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCEEEEEecCHHHHHHhcccCCceEEEEeeCCCC---HHHHHHHhhcCCCEEEECC
Confidence 46899999999999999988888899999999887765433201 11211 1344331 1223232212599999887
Q ss_pred Chh--------------hHHHHHHhhhhC--CEEEEEceec
Q 019332 231 GGK--------------MLDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 231 g~~--------------~~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
|.. ....+++.+... ++++.+++..
T Consensus 94 g~~~~~~~~~~~~~n~~~~~~ll~a~~~~~~~~iV~iSS~~ 134 (251)
T PLN00141 94 GFRRSFDPFAPWKVDNFGTVNLVEACRKAGVTRFILVSSIL 134 (251)
T ss_pred CCCcCCCCCCceeeehHHHHHHHHHHHHcCCCEEEEEcccc
Confidence 741 123445555443 5888877653
|
|
| >PRK07666 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0028 Score=53.88 Aligned_cols=80 Identities=19% Similarity=0.272 Sum_probs=52.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+++... +++|
T Consensus 7 ~~~vlVtG~sg~iG~~l~~~L~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 86 (239)
T PRK07666 7 GKNALITGAGRGIGRAVAIALAKEGVNVGLLARTEENLKAVAEEVEAYGVKVVIATADVSDYEEVTAAIEQLKNELGSID 86 (239)
T ss_pred CCEEEEEcCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCeEEEEECCCCCHHHHHHHHHHHHHHcCCcc
Confidence 578999999999999999888888999999999877654432122 221 1 1233333233333333221 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
.+|.+.|.
T Consensus 87 ~vi~~ag~ 94 (239)
T PRK07666 87 ILINNAGI 94 (239)
T ss_pred EEEEcCcc
Confidence 99998874
|
|
| >PRK06138 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.10 E-value=0.0036 Score=53.57 Aligned_cols=81 Identities=14% Similarity=0.174 Sum_probs=53.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--CCC-ee--EecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--GFD-EA--FNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.+.+++|+|++|++|...++.+...|++|++++++.++.+....++ +.. .. .|..+...+.+.+.+... +.+|
T Consensus 4 ~~k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id 83 (252)
T PRK06138 4 AGRVAIVTGAGSGIGRATAKLFAREGARVVVADRDAEAAERVAAAIAAGGRAFARQGDVGSAEAVEALVDFVAARWGRLD 83 (252)
T ss_pred CCcEEEEeCCCchHHHHHHHHHHHCCCeEEEecCCHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 3568999999999999988888778999999999877655443233 221 11 244443123232322211 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++.+.|.
T Consensus 84 ~vi~~ag~ 91 (252)
T PRK06138 84 VLVNNAGF 91 (252)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK12367 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0046 Score=52.96 Aligned_cols=74 Identities=26% Similarity=0.324 Sum_probs=48.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+.+++|+||+|++|.++++.+...|++|+++++++.+..... ..+... ..|..+. +.+.+.. +.+|++++++
T Consensus 14 ~k~~lITGas~gIG~ala~~l~~~G~~Vi~~~r~~~~~~~~~-~~~~~~~~~~D~~~~----~~~~~~~-~~iDilVnnA 87 (245)
T PRK12367 14 GKRIGITGASGALGKALTKAFRAKGAKVIGLTHSKINNSESN-DESPNEWIKWECGKE----ESLDKQL-ASLDVLILNH 87 (245)
T ss_pred CCEEEEEcCCcHHHHHHHHHHHHCCCEEEEEECCchhhhhhh-ccCCCeEEEeeCCCH----HHHHHhc-CCCCEEEECC
Confidence 579999999999999999988889999999998762211111 111112 2344332 2233333 3599999999
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
|.
T Consensus 88 G~ 89 (245)
T PRK12367 88 GI 89 (245)
T ss_pred cc
Confidence 84
|
|
| >PRK12481 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0037 Score=53.67 Aligned_cols=80 Identities=18% Similarity=0.243 Sum_probs=52.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+|+++++|.+.++.+...|++|+++.+++.+ .+.++ +.+.. ..+|..+..++.+.+.+.. .+++|
T Consensus 7 ~~k~~lItGas~gIG~aia~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~iD 85 (251)
T PRK12481 7 NGKVAIITGCNTGLGQGMAIGLAKAGADIVGVGVAEAPETQAQVE-ALGRKFHFITADLIQQKDIDSIVSQAVEVMGHID 85 (251)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEecCchHHHHHHHHH-HcCCeEEEEEeCCCCHHHHHHHHHHHHHHcCCCC
Confidence 46899999999999999999988899999988775432 12233 44432 1234444423333333321 23699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++++.|.
T Consensus 86 ~lv~~ag~ 93 (251)
T PRK12481 86 ILINNAGI 93 (251)
T ss_pred EEEECCCc
Confidence 99999883
|
|
| >PRK07454 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0039 Score=53.07 Aligned_cols=81 Identities=16% Similarity=0.236 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.+++|+|++|++|..++..+...|++|+++++++++.+.+.+++ +.. . ..|..+...+...+++... +.+
T Consensus 5 ~~k~vlItG~sg~iG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (241)
T PRK07454 5 SMPRALITGASSGIGKATALAFAKAGWDLALVARSQDALEALAAELRSTGVKAAAYSIDLSNPEAIAPGIAELLEQFGCP 84 (241)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhCCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4568999999999999999999889999999999887665554222 221 1 2343333133333333221 359
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++++.|.
T Consensus 85 d~lv~~ag~ 93 (241)
T PRK07454 85 DVLINNAGM 93 (241)
T ss_pred CEEEECCCc
Confidence 999999984
|
|
| >PRK08159 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.09 E-value=0.0032 Score=54.84 Aligned_cols=83 Identities=10% Similarity=0.129 Sum_probs=53.0
Q ss_pred CCCCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCCh---hhHHHHHHHcCCCe--eEecCCchhHHHHHHHHC--C
Q 019332 150 PKQGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYF--P 220 (342)
Q Consensus 150 ~~~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~---~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~--~ 220 (342)
.-.+.++||+|++ +++|.+.++.+...|++|+.+.+++ ++.+.+.++++... ..|-.+..+..+.+.+.. .
T Consensus 7 ~~~~k~~lItGas~~~GIG~aia~~la~~G~~V~l~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~ 86 (272)
T PRK08159 7 LMAGKRGLILGVANNRSIAWGIAKACRAAGAELAFTYQGDALKKRVEPLAAELGAFVAGHCDVTDEASIDAVFETLEKKW 86 (272)
T ss_pred cccCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCchHHHHHHHHHHHhcCCceEEecCCCCHHHHHHHHHHHHHhc
Confidence 3456899999996 7999999998888999999887764 33343433455322 234444323333333322 1
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+.+|++++++|.
T Consensus 87 g~iD~lv~nAG~ 98 (272)
T PRK08159 87 GKLDFVVHAIGF 98 (272)
T ss_pred CCCcEEEECCcc
Confidence 369999999873
|
|
| >PRK08085 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0033 Score=54.03 Aligned_cols=81 Identities=20% Similarity=0.345 Sum_probs=53.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+.+.+++++.+.+.+++ +.. .. .|..+...+.+.+.+.. .+.+
T Consensus 8 ~~k~~lItGas~giG~~ia~~L~~~G~~vvl~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 87 (254)
T PRK08085 8 AGKNILITGSAQGIGFLLATGLAEYGAEIIINDITAERAELAVAKLRQEGIKAHAAPFNVTHKQEVEAAIEHIEKDIGPI 87 (254)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEecCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999888888999999999877655443232 221 11 23343312222222221 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.+.|.
T Consensus 88 d~vi~~ag~ 96 (254)
T PRK08085 88 DVLINNAGI 96 (254)
T ss_pred CEEEECCCc
Confidence 999999983
|
|
| >PRK07069 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0073 Score=51.67 Aligned_cols=78 Identities=17% Similarity=0.243 Sum_probs=50.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHHHcC----CC----eeEecCCchhHHHHHHHHC--CCCc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKNKFG----FD----EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~~~g----~~----~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
+++|+|++|++|...++.+...|++|+++.++ .++.+.+.+++. .. ...|..+...+.+.+.+.. .+++
T Consensus 1 ~ilVtG~~~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 80 (251)
T PRK07069 1 RAFITGAAGGLGRAIARRMAEQGAKVFLTDINDAAGLDAFAAEINAAHGEGVAFAAVQDVTDEAQWQALLAQAADAMGGL 80 (251)
T ss_pred CEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCCceEEEEEeecCCHHHHHHHHHHHHHHcCCc
Confidence 37999999999999888888889999999987 555444432321 11 1224444323333333322 1358
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.++|.
T Consensus 81 d~vi~~ag~ 89 (251)
T PRK07069 81 SVLVNNAGV 89 (251)
T ss_pred cEEEECCCc
Confidence 999999883
|
|
| >KOG1201 consensus Hydroxysteroid 17-beta dehydrogenase 11 [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.08 E-value=0.0032 Score=54.04 Aligned_cols=79 Identities=22% Similarity=0.303 Sum_probs=52.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH----HHHHHHcC-C-CeeEecCCchh---HHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI----DLLKNKFG-F-DEAFNYKEEPD---LNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~----~~~~~~~g-~-~~v~~~~~~~~---~~~~i~~~~~~ 221 (342)
-.|+.|||+||++|+|.+.++=....|++++..+.+.+-. +.++ +.| + ..+.|-.+.++ .++++++..+
T Consensus 36 v~g~~vLITGgg~GlGr~ialefa~rg~~~vl~Din~~~~~etv~~~~-~~g~~~~y~cdis~~eei~~~a~~Vk~e~G- 113 (300)
T KOG1201|consen 36 VSGEIVLITGGGSGLGRLIALEFAKRGAKLVLWDINKQGNEETVKEIR-KIGEAKAYTCDISDREEIYRLAKKVKKEVG- 113 (300)
T ss_pred ccCCEEEEeCCCchHHHHHHHHHHHhCCeEEEEeccccchHHHHHHHH-hcCceeEEEecCCCHHHHHHHHHHHHHhcC-
Confidence 3689999999999999876666666688888887766433 3333 334 2 23445444323 4445554433
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
.+|+++|.+|
T Consensus 114 ~V~ILVNNAG 123 (300)
T KOG1201|consen 114 DVDILVNNAG 123 (300)
T ss_pred CceEEEeccc
Confidence 5999999999
|
|
| >PRK08628 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0028 Score=54.59 Aligned_cols=81 Identities=12% Similarity=0.146 Sum_probs=53.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH--HcCCC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN--KFGFD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+||+|++|...++.+...|++|+++++++++.+...+ +.+.. ...|..+...+...+.+.. .+++|
T Consensus 6 ~~~~ilItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 85 (258)
T PRK08628 6 KDKVVIVTGGASGIGAAISLRLAEEGAIPVIFGRSAPDDEFAEELRALQPRAEFVQVDLTDDAQCRDAVEQTVAKFGRID 85 (258)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHcCCcEEEEcCChhhHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCCC
Confidence 45789999999999999888888889999999988876543331 22321 1234444312333333322 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++.++|.
T Consensus 86 ~vi~~ag~ 93 (258)
T PRK08628 86 GLVNNAGV 93 (258)
T ss_pred EEEECCcc
Confidence 99999983
|
|
| >KOG1208 consensus Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=97.07 E-value=0.0077 Score=53.27 Aligned_cols=104 Identities=17% Similarity=0.246 Sum_probs=71.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----Cee----EecCCc---hhHHHHHHHHC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----DEA----FNYKEE---PDLNEALKRYF 219 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~~v----~~~~~~---~~~~~~i~~~~ 219 (342)
..+.+++|+|+++|+|..++.-+...|++|+.++|+.++.+.+++++.. ..+ +|-.+. ..+++.+++.
T Consensus 33 ~~~~~~vVTGansGIG~eta~~La~~Ga~Vv~~~R~~~~~~~~~~~i~~~~~~~~i~~~~lDLssl~SV~~fa~~~~~~- 111 (314)
T KOG1208|consen 33 LSGKVALVTGATSGIGFETARELALRGAHVVLACRNEERGEEAKEQIQKGKANQKIRVIQLDLSSLKSVRKFAEEFKKK- 111 (314)
T ss_pred CCCcEEEEECCCCchHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEECCCCCHHHHHHHHHHHHhc-
Confidence 3557999999999999999999999999999999999777766644432 222 233332 1244444422
Q ss_pred CCCccEEEeCCChh------------------------hHHHHHHhhhhC--CEEEEEceec
Q 019332 220 PEGIDIYFENVGGK------------------------MLDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 220 ~~~~d~vid~~g~~------------------------~~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
....|+.++.+|-- ..+.+++.|+.. +|+|.+++..
T Consensus 112 ~~~ldvLInNAGV~~~~~~~t~DG~E~~~~tN~lg~flLt~lLlp~lk~s~~~RIV~vsS~~ 173 (314)
T KOG1208|consen 112 EGPLDVLINNAGVMAPPFSLTKDGLELTFATNYLGHFLLTELLLPLLKRSAPSRIVNVSSIL 173 (314)
T ss_pred CCCccEEEeCcccccCCcccCccchhheehhhhHHHHHHHHHHHHHHhhCCCCCEEEEcCcc
Confidence 12689999988820 234566667665 7999888744
|
|
| >PRK06125 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0038 Score=53.85 Aligned_cols=79 Identities=23% Similarity=0.352 Sum_probs=53.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-ee--EecCCchhHHHHHHHHCCCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-EA--FNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~i~~~~~~~~d 224 (342)
.+.+++|+|+++++|.+.++.+...|++|+++++++++.+.+.+++ +.. .. .|..+..++.+.+++. +.+|
T Consensus 6 ~~k~vlItG~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~--g~id 83 (259)
T PRK06125 6 AGKRVLITGASKGIGAAAAEAFAAEGCHLHLVARDADALEALAADLRAAHGVDVAVHALDLSSPEAREQLAAEA--GDID 83 (259)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEecCCCHHHHHHHHHHh--CCCC
Confidence 3679999999999999999988888999999999887665543222 221 12 3333331232223222 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++++.|.
T Consensus 84 ~lv~~ag~ 91 (259)
T PRK06125 84 ILVNNAGA 91 (259)
T ss_pred EEEECCCC
Confidence 99999884
|
|
| >PRK12938 acetyacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.06 E-value=0.0058 Score=52.15 Aligned_cols=81 Identities=21% Similarity=0.296 Sum_probs=49.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhH-HHHHH--HcCCCe---eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKI-DLLKN--KFGFDE---AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~-~~~~~--~~g~~~---v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
++.++||+|++|++|...++.+...|++|++..+ +..+. +.+.+ ..+... ..|..+..++.+.+.+.. .++
T Consensus 2 ~~k~~lVtG~s~giG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 81 (246)
T PRK12938 2 SQRIAYVTGGMGGIGTSICQRLHKDGFKVVAGCGPNSPRRVKWLEDQKALGFDFIASEGNVGDWDSTKAAFDKVKAEVGE 81 (246)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999999889999887553 22222 22220 234322 134444312333333221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++++.|.
T Consensus 82 id~li~~ag~ 91 (246)
T PRK12938 82 IDVLVNNAGI 91 (246)
T ss_pred CCEEEECCCC
Confidence 9999999984
|
|
| >PRK12747 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0093 Score=51.14 Aligned_cols=105 Identities=17% Similarity=0.195 Sum_probs=63.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHHHc---CCC-ee--EecCCch---hHHHHHHHH---
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKNKF---GFD-EA--FNYKEEP---DLNEALKRY--- 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~~~---g~~-~v--~~~~~~~---~~~~~i~~~--- 218 (342)
.+.++||+|+++++|.++++.+...|++|++.. ++.++.+.+..++ +.. .. .|..+.. .+.+.+.+.
T Consensus 3 ~~k~~lItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 82 (252)
T PRK12747 3 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 82 (252)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHHHhcCCceEEEecccCCHHHHHHHHHHHHHHhhh
Confidence 467999999999999999999999999998865 4444433222122 221 11 2222221 122233321
Q ss_pred -CC-CCccEEEeCCChh-----------hH---------------HHHHHhhhhCCEEEEEceecc
Q 019332 219 -FP-EGIDIYFENVGGK-----------ML---------------DAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 219 -~~-~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.+ +++|++++++|.. .+ ..+++.++..|+++.+++...
T Consensus 83 ~~g~~~id~lv~~Ag~~~~~~~~~~~~~~~~~~~~vN~~~~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (252)
T PRK12747 83 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 148 (252)
T ss_pred hcCCCCCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHhhcCCeEEEECCccc
Confidence 12 2699999998831 01 224455666799999887654
|
|
| >PRK06603 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0043 Score=53.62 Aligned_cols=80 Identities=14% Similarity=0.216 Sum_probs=50.8
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHcCCCe--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.+++|+||++ ++|.+.++.+...|++|+...+++. ..+.+.++.|... .+|-.+..+..+.+.+... +.
T Consensus 7 ~~k~~lITGas~~~GIG~a~a~~la~~G~~v~~~~r~~~~~~~~~~l~~~~g~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (260)
T PRK06603 7 QGKKGLITGIANNMSISWAIAQLAKKHGAELWFTYQSEVLEKRVKPLAEEIGCNFVSELDVTNPKSISNLFDDIKEKWGS 86 (260)
T ss_pred CCcEEEEECCCCCcchHHHHHHHHHHcCCEEEEEeCchHHHHHHHHHHHhcCCceEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 467899999987 8999998888888999998887642 2222322334322 2344444233333333222 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 87 iDilVnnag 95 (260)
T PRK06603 87 FDFLLHGMA 95 (260)
T ss_pred ccEEEEccc
Confidence 999999887
|
|
| >PLN02730 enoyl-[acyl-carrier-protein] reductase | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.013 Score=51.86 Aligned_cols=38 Identities=13% Similarity=0.211 Sum_probs=32.1
Q ss_pred CCCEEEEecC--CcHHHHHHHHHHHHcCCEEEEEeCChhhH
Q 019332 152 QGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKI 190 (342)
Q Consensus 152 ~~~~vlI~ga--~g~vG~~ai~la~~~ga~Vi~~~~s~~~~ 190 (342)
.|.++||+|+ ++|||.+.++.+...|++|++ +++..++
T Consensus 8 ~gk~alITGa~~s~GIG~a~A~~la~~Ga~Vv~-~~~~~~l 47 (303)
T PLN02730 8 RGKRAFIAGVADDNGYGWAIAKALAAAGAEILV-GTWVPAL 47 (303)
T ss_pred CCCEEEEeCCCCCCcHHHHHHHHHHHCCCEEEE-EeCcchh
Confidence 5789999999 799999999999999999988 5454443
|
|
| >PRK13943 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=97.05 E-value=0.0077 Score=53.47 Aligned_cols=100 Identities=19% Similarity=0.268 Sum_probs=68.8
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
+...++++++||..|+ |.|..++.+++..+. +|+++..+++-.+.+++ +.|.+.+..... +..+.+.+.
T Consensus 74 ~~L~i~~g~~VLDIG~--GtG~~a~~LA~~~~~~g~VvgVDis~~~l~~Ar~~l~~~g~~nV~~i~g--D~~~~~~~~-- 147 (322)
T PRK13943 74 EWVGLDKGMRVLEIGG--GTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVRRLGIENVIFVCG--DGYYGVPEF-- 147 (322)
T ss_pred HhcCCCCCCEEEEEeC--CccHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEeC--Chhhccccc--
Confidence 4457889999999995 469999999998764 79999999876655543 356543322222 322222211
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.+|+|+.+.+. ......++.|+++|+++..
T Consensus 148 ~~fD~Ii~~~g~~~ip~~~~~~LkpgG~Lvv~ 179 (322)
T PRK13943 148 APYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 179 (322)
T ss_pred CCccEEEECCchHHhHHHHHHhcCCCCEEEEE
Confidence 259999988876 4455778899999998763
|
|
| >PRK05557 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Validated | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.013 Score=49.88 Aligned_cols=81 Identities=21% Similarity=0.328 Sum_probs=50.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHH---cCCC-eeE--ecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNK---FGFD-EAF--NYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~---~g~~-~v~--~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+|++|++|...+..+...|++|+++.++..+ .+...+. .+.. ..+ |..+...+.+.+++... ++
T Consensus 4 ~~~~vlItG~sg~iG~~l~~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 83 (248)
T PRK05557 4 EGKVALVTGASRGIGRAIAERLAAQGANVVINYASSEAGAEALVAEIGALGGKALAVQGDVSDAESVERAVDEAKAEFGG 83 (248)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 34689999999999999999998889999777765542 2222212 2222 122 44443223333333222 25
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|.++.++|.
T Consensus 84 id~vi~~ag~ 93 (248)
T PRK05557 84 VDILVNNAGI 93 (248)
T ss_pred CCEEEECCCc
Confidence 8999998874
|
|
| >PRK08277 D-mannonate oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0045 Score=54.00 Aligned_cols=80 Identities=16% Similarity=0.246 Sum_probs=53.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.+++|+|++|++|.+.++.+...|++|+++.+++++.+.+.+++ +.. . ..|..+...+...+.+.. .+.+
T Consensus 9 ~~k~vlVtGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 88 (278)
T PRK08277 9 KGKVAVITGGGGVLGGAMAKELARAGAKVAILDRNQEKAEAVVAEIKAAGGEALAVKADVLDKESLEQARQQILEDFGPC 88 (278)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999999889999999998876654443232 321 1 133433312333333222 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 89 d~li~~ag 96 (278)
T PRK08277 89 DILINGAG 96 (278)
T ss_pred CEEEECCC
Confidence 99999987
|
|
| >PF02670 DXP_reductoisom: 1-deoxy-D-xylulose 5-phosphate reductoisomerase; InterPro: IPR013512 1-deoxy-D-xylulose 5-phosphate reductoisomerase synthesises 2-C-methyl-D-erythritol 4-phosphate from 1-deoxy-D-xylulose 5-phosphate in a single step by intramolecular rearrangement and reduction and is responsible for terpenoid biosynthesis in some organisms [] | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.019 Score=43.35 Aligned_cols=93 Identities=20% Similarity=0.214 Sum_probs=59.0
Q ss_pred EEEecCCcHHHHHHHHHHHHcC--CEEEEEeCC--hhhHHHHHHHcCCCeeEecCCchhHHHHHH---------------
Q 019332 156 VFISAASGAVGQLVGQFAKLLG--CYVVGSAGS--KDKIDLLKNKFGFDEAFNYKEEPDLNEALK--------------- 216 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s--~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~--------------- 216 (342)
|.|.|+||.||..++++.+... ++|++.+-. -+++....++|....++-+++ ...+.++
T Consensus 1 i~ILGsTGSIG~qtLdVi~~~~d~f~v~~Lsa~~n~~~L~~q~~~f~p~~v~i~~~--~~~~~l~~~~~~~~~~~~v~~G 78 (129)
T PF02670_consen 1 IAILGSTGSIGTQTLDVIRKHPDKFEVVALSAGSNIEKLAEQAREFKPKYVVIADE--EAYEELKKALPSKGPGIEVLSG 78 (129)
T ss_dssp EEEESTTSHHHHHHHHHHHHCTTTEEEEEEEESSTHHHHHHHHHHHT-SEEEESSH--HHHHHHHHHHHHTTSSSEEEES
T ss_pred CEEEcCCcHHHHHHHHHHHhCCCceEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHHhhhcCCCCEEEeC
Confidence 6799999999999999999887 587765533 234332222787766654443 2222222
Q ss_pred -----HHCC-CCccEEEeCCCh-hhHHHHHHhhhhCCEEEE
Q 019332 217 -----RYFP-EGIDIYFENVGG-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 217 -----~~~~-~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~ 250 (342)
++.. ..+|+++.+..+ ..+...+.+++.+-++.+
T Consensus 79 ~~~l~~~~~~~~~D~vv~Ai~G~aGL~pt~~Ai~~gk~iaL 119 (129)
T PF02670_consen 79 PEGLEELAEEPEVDIVVNAIVGFAGLKPTLAAIKAGKDIAL 119 (129)
T ss_dssp HHHHHHHHTHTT-SEEEE--SSGGGHHHHHHHHHTTSEEEE
T ss_pred hHHHHHHhcCCCCCEEEEeCcccchHHHHHHHHHCCCeEEE
Confidence 2222 268998888777 788888888887766554
|
In Arabidopsis thaliana 1-deoxy-D-xylulose 5-phosphate reductoisomerase is the first committed enzyme of the non-mevalonate pathway for isoprenoid biosynthesis. The enzyme requires Mn2+, Co2+ or Mg2+ for activity, with the first being most effective. This domain is found at the N terminus of bacterial and plant 1-deoxy-D-xylulose 5-phosphate reductoisomerases.; GO: 0070402 NADPH binding, 0055114 oxidation-reduction process; PDB: 1R0K_D 1R0L_C 3A14_A 3A06_A 3AUA_A 3AU9_B 3AU8_B 3IIE_A 2Y1D_B 4AIC_A .... |
| >TIGR01289 LPOR light-dependent protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=97.04 E-value=0.0048 Score=54.98 Aligned_cols=80 Identities=15% Similarity=0.185 Sum_probs=53.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCC--C--ee--EecCCchhHHHHHHHHC--CCCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGF--D--EA--FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~--~--~v--~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
+.+++|+|+++++|.++++.+...| ++|+.+++++++.+.+.++++. . .+ +|..+..++.+.+.+.. .+++
T Consensus 3 ~k~vlITGas~GIG~aia~~L~~~G~~~V~l~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~i 82 (314)
T TIGR01289 3 KPTVIITGASSGLGLYAAKALAATGEWHVIMACRDFLKAEQAAKSLGMPKDSYTIMHLDLGSLDSVRQFVQQFRESGRPL 82 (314)
T ss_pred CCEEEEECCCChHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEcCCCCHHHHHHHHHHHHHhCCCC
Confidence 4689999999999999888888889 8999999988776655435432 1 11 34444312222222221 2369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 83 D~lI~nAG~ 91 (314)
T TIGR01289 83 DALVCNAAV 91 (314)
T ss_pred CEEEECCCc
Confidence 999998873
|
This model represents the light-dependent, NADPH-dependent form of protochlorophyllide reductase. It belongs to the short chain alcohol dehydrogenase family, in contrast to the nitrogenase-related light-independent form. |
| >PRK12936 3-ketoacyl-(acyl-carrier-protein) reductase NodG; Reviewed | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0053 Score=52.30 Aligned_cols=81 Identities=21% Similarity=0.343 Sum_probs=53.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-ee--EecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EA--FNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
++.++||+|++|++|..+++.+...|+.|+...++.++.+.+...++.. .+ .|..+...+.+.+.+.. .+++|.+
T Consensus 5 ~~~~vlItGa~g~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 84 (245)
T PRK12936 5 SGRKALVTGASGGIGEEIARLLHAQGAIVGLHGTRVEKLEALAAELGERVKIFPANLSDRDEVKALGQKAEADLEGVDIL 84 (245)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 3579999999999999998888888999988888877766554344431 12 23333312222222221 1369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+.+.|.
T Consensus 85 i~~ag~ 90 (245)
T PRK12936 85 VNNAGI 90 (245)
T ss_pred EECCCC
Confidence 999884
|
|
| >PRK07424 bifunctional sterol desaturase/short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=97.02 E-value=0.0052 Score=56.43 Aligned_cols=76 Identities=30% Similarity=0.376 Sum_probs=50.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-ee--EecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EA--FNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+++|+||+|++|.+.++.+...|++|+++++++++.+...+..+.. .. .|..+. +.+.+.. +++|++++
T Consensus 177 ~gK~VLITGASgGIG~aLA~~La~~G~~Vi~l~r~~~~l~~~~~~~~~~v~~v~~Dvsd~----~~v~~~l-~~IDiLIn 251 (406)
T PRK07424 177 KGKTVAVTGASGTLGQALLKELHQQGAKVVALTSNSDKITLEINGEDLPVKTLHWQVGQE----AALAELL-EKVDILII 251 (406)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHhhcCCCeEEEEeeCCCH----HHHHHHh-CCCCEEEE
Confidence 4679999999999999999888888999999998876553322111111 12 343332 2233332 35999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 252 nAGi 255 (406)
T PRK07424 252 NHGI 255 (406)
T ss_pred CCCc
Confidence 8773
|
|
| >PRK05447 1-deoxy-D-xylulose 5-phosphate reductoisomerase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.014 Score=52.64 Aligned_cols=97 Identities=16% Similarity=0.159 Sum_probs=66.8
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc--CCEEEEEe--CChhhHHHHHHHcCCCeeEecCCchhHHHHHHH------------
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSA--GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKR------------ 217 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~------------ 217 (342)
.+|.|.|++|+||..+++..+.. .++|++.+ ++.+++....++++...++-.++ ...+.+++
T Consensus 2 k~VaILGsTGSIG~~tL~vi~~~p~~f~VvaLaa~~n~~~l~~q~~~f~p~~v~i~~~--~~~~~l~~~l~~~~~~v~~G 79 (385)
T PRK05447 2 KRITILGSTGSIGTQTLDVIRRNPDRFRVVALSAGKNVELLAEQAREFRPKYVVVADE--EAAKELKEALAAAGIEVLAG 79 (385)
T ss_pred ceEEEEcCChHHHHHHHHHHHhCccccEEEEEEcCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhccCCceEEEC
Confidence 47999999999999999998765 56888776 34445554444788866544433 22333332
Q ss_pred ------HCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEc
Q 019332 218 ------YFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 218 ------~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 252 (342)
+... .+|+|+++.++ ..+...+.+++.|-++.+..
T Consensus 80 ~~~~~~l~~~~~vD~Vv~Ai~G~aGl~ptl~Ai~aGK~VaLAN 122 (385)
T PRK05447 80 EEGLCELAALPEADVVVAAIVGAAGLLPTLAAIRAGKRIALAN 122 (385)
T ss_pred hhHHHHHhcCCCCCEEEEeCcCcccHHHHHHHHHCCCcEEEeC
Confidence 2222 58999999998 67788888898887766543
|
|
| >PRK06114 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.01 E-value=0.0049 Score=53.01 Aligned_cols=81 Identities=19% Similarity=0.181 Sum_probs=51.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHH---HcCCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+|+++++|.++++.+...|++|++++++.++ .+.+.+ ..+.. . ..|..+..++.+.+.+.. .+.
T Consensus 7 ~~k~~lVtG~s~gIG~~ia~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~ 86 (254)
T PRK06114 7 DGQVAFVTGAGSGIGQRIAIGLAQAGADVALFDLRTDDGLAETAEHIEAAGRRAIQIAADVTSKADLRAAVARTEAELGA 86 (254)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46799999999999999999988899999999876532 222211 22321 1 123333313333333221 236
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++++.|.
T Consensus 87 id~li~~ag~ 96 (254)
T PRK06114 87 LTLAVNAAGI 96 (254)
T ss_pred CCEEEECCCC
Confidence 8999999984
|
|
| >PRK07074 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0059 Score=52.51 Aligned_cols=80 Identities=18% Similarity=0.250 Sum_probs=53.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC--e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD--E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
+.++||+|++|++|...+..+...|++|++++++.++.+.+.+.+... . ..|..+...+...+.+.. .+++|++
T Consensus 2 ~k~ilItGat~~iG~~la~~L~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~d~v 81 (257)
T PRK07074 2 KRTALVTGAAGGIGQALARRFLAAGDRVLALDIDAAALAAFADALGDARFVPVACDLTDAASLAAALANAAAERGPVDVL 81 (257)
T ss_pred CCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 468999999999999988888888999999999887766554233211 1 234444312223333221 1358999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+.+.|.
T Consensus 82 i~~ag~ 87 (257)
T PRK07074 82 VANAGA 87 (257)
T ss_pred EECCCC
Confidence 999974
|
|
| >PF01135 PCMT: Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); InterPro: IPR000682 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (2 | Back alignment and domain information |
|---|
Probab=97.00 E-value=0.0021 Score=53.28 Aligned_cols=99 Identities=19% Similarity=0.241 Sum_probs=64.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHH---HcCCCee-EecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKN---KFGFDEA-FNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~i~~~~ 219 (342)
+...+++|++||-.| +|.|+.++-+++..|. +|+.+.+.++=.+.+++ +++.+.+ +...+. ..-+.+
T Consensus 66 ~~L~l~pg~~VLeIG--tGsGY~aAlla~lvg~~g~Vv~vE~~~~l~~~A~~~l~~~~~~nv~~~~gdg---~~g~~~-- 138 (209)
T PF01135_consen 66 EALDLKPGDRVLEIG--TGSGYQAALLAHLVGPVGRVVSVERDPELAERARRNLARLGIDNVEVVVGDG---SEGWPE-- 138 (209)
T ss_dssp HHTTC-TT-EEEEES---TTSHHHHHHHHHHSTTEEEEEEESBHHHHHHHHHHHHHHTTHSEEEEES-G---GGTTGG--
T ss_pred HHHhcCCCCEEEEec--CCCcHHHHHHHHhcCccceEEEECccHHHHHHHHHHHHHhccCceeEEEcch---hhcccc--
Confidence 556799999999999 6779999999998875 68999988764444443 4455322 222221 111111
Q ss_pred CCCccEEEeCCChh-hHHHHHHhhhhCCEEEEE
Q 019332 220 PEGIDIYFENVGGK-MLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 220 ~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~ 251 (342)
.+.||.|+-+.+-+ .-...++.|+++|++|..
T Consensus 139 ~apfD~I~v~~a~~~ip~~l~~qL~~gGrLV~p 171 (209)
T PF01135_consen 139 EAPFDRIIVTAAVPEIPEALLEQLKPGGRLVAP 171 (209)
T ss_dssp G-SEEEEEESSBBSS--HHHHHTEEEEEEEEEE
T ss_pred CCCcCEEEEeeccchHHHHHHHhcCCCcEEEEE
Confidence 12699999887774 446788999999999873
|
1.1.77 from EC) (PCMT) [] (which is also known as L-isoaspartyl protein carboxyl methyltransferase) is an enzyme that catalyses the transfer of a methyl group from S-adenosylmethionine to the free carboxyl groups of D-aspartyl or L-isoaspartyl residues in a variety of peptides and proteins. The enzyme does not act on normal L-aspartyl residues L-isoaspartyl and D-aspartyl are the products of the spontaneous deamidation and/or isomerisation of normal L-aspartyl and L-asparaginyl residues in proteins. PCMT plays a role in the repair and/or degradation of these damaged proteins; the enzymatic methyl esterification of the abnormal residues can lead to their conversion to normal L-aspartyl residues. The SAM domain is present in most of these proteins.; GO: 0004719 protein-L-isoaspartate (D-aspartate) O-methyltransferase activity, 0006464 protein modification process; PDB: 3LBF_A 1DL5_B 1JG3_B 1JG2_A 1JG1_A 1JG4_A 2YXE_A 2PBF_B 1VBF_C 1R18_A .... |
| >PRK06077 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.99 E-value=0.015 Score=49.71 Aligned_cols=102 Identities=16% Similarity=0.219 Sum_probs=62.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHH----HHHHHcCCC-e--eEecCCchhHH---HHHHHHCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKID----LLKNKFGFD-E--AFNYKEEPDLN---EALKRYFPE 221 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~----~~~~~~g~~-~--v~~~~~~~~~~---~~i~~~~~~ 221 (342)
+.++||+|++|++|.+.++-+...|++|+.+.++. ++.. .++ +.+.. . ..|..+...+. +.+.+.. +
T Consensus 6 ~~~vlitGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~ 83 (252)
T PRK06077 6 DKVVVVTGSGRGIGRAIAVRLAKEGSLVVVNAKKRAEEMNETLKMVK-ENGGEGIGVLADVSTREGCETLAKATIDRY-G 83 (252)
T ss_pred CcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHH-HcCCeeEEEEeccCCHHHHHHHHHHHHHHc-C
Confidence 57899999999999998888888999988776532 2221 222 33332 1 13444431222 2232222 3
Q ss_pred CccEEEeCCCh-h----------h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 222 GIDIYFENVGG-K----------M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~-~----------~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++|.+|.+.|. . . .+.+.+.++..|+++.+++...
T Consensus 84 ~~d~vi~~ag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~iv~~sS~~~ 144 (252)
T PRK06077 84 VADILVNNAGLGLFSPFLNVDDKLIDKHISTDFKSVIYCSQELAKEMREGGAIVNIASVAG 144 (252)
T ss_pred CCCEEEECCCCCCCCChhhCCHHHHHHHHhHhCHHHHHHHHHHHHHhhcCcEEEEEcchhc
Confidence 68999999983 0 0 2234455567789999887554
|
|
| >PRK06701 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.014 Score=51.38 Aligned_cols=105 Identities=19% Similarity=0.211 Sum_probs=63.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|...+..+...|++|+.+.++.++ .+.+.+ ..+... ..|..+...+.+.+.+... +.
T Consensus 45 ~~k~iLItGasggIG~~la~~l~~~G~~V~l~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~i~~~~~~ 124 (290)
T PRK06701 45 KGKVALITGGDSGIGRAVAVLFAKEGADIAIVYLDEHEDANETKQRVEKEGVKCLLIPGDVSDEAFCKDAVEETVRELGR 124 (290)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHhcCCeEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46789999999999999888888889999998876432 222221 223221 1243333123233332221 36
Q ss_pred ccEEEeCCChh---------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 223 IDIYFENVGGK---------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~---------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|+++.++|.. ....+.+.+++.|+++.+++...
T Consensus 125 iD~lI~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~g~iV~isS~~~ 185 (290)
T PRK06701 125 LDILVNNAAFQYPQQSLEDITAEQLDKTFKTNIYSYFHMTKAALPHLKQGSAIINTGSITG 185 (290)
T ss_pred CCEEEECCcccCCCCCcccCCHHHHHHHHhhhhHHHHHHHHHHHHHHhhCCeEEEEecccc
Confidence 89999988741 01223344566789998887543
|
|
| >PRK07856 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0041 Score=53.40 Aligned_cols=76 Identities=16% Similarity=0.274 Sum_probs=51.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-eeEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-EAFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+|++|++|.+.++.+...|++|++++++.++ . ..+. . ...|..+..++.+.+.+.. .+.+|++
T Consensus 5 ~~k~~lItGas~gIG~~la~~l~~~g~~v~~~~r~~~~----~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 79 (252)
T PRK07856 5 TGRVVLVTGGTRGIGAGIARAFLAAGATVVVCGRRAPE----T-VDGRPAEFHAADVRDPDQVAALVDAIVERHGRLDVL 79 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCChhh----h-hcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46899999999999999999888899999999987654 1 2222 1 1234444323333333221 1368999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|.++|.
T Consensus 80 i~~ag~ 85 (252)
T PRK07856 80 VNNAGG 85 (252)
T ss_pred EECCCC
Confidence 999873
|
|
| >PRK06463 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.97 E-value=0.0062 Score=52.36 Aligned_cols=80 Identities=14% Similarity=0.167 Sum_probs=51.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
.+.+++|+|++|++|.+.++.+...|++|+++.++. +..+.++ +.+.. ...|..+...+.+.+.+.. .+++|+++
T Consensus 6 ~~k~~lItGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~l~-~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id~li 84 (255)
T PRK06463 6 KGKVALITGGTRGIGRAIAEAFLREGAKVAVLYNSAENEAKELR-EKGVFTIKCDVGNRDQVKKSKEVVEKEFGRVDVLV 84 (255)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHH-hCCCeEEEecCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 357899999999999999998888899998876543 3333444 33332 1234444423333333322 13699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
.+.|.
T Consensus 85 ~~ag~ 89 (255)
T PRK06463 85 NNAGI 89 (255)
T ss_pred ECCCc
Confidence 99874
|
|
| >PRK08226 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0057 Score=52.79 Aligned_cols=80 Identities=20% Similarity=0.250 Sum_probs=51.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH--HcCCC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN--KFGFD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~--~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.+++|+|++|++|.+.++.+...|++|+.+.++++..+.+.+ +.+.. ...|..+..++.+.+.+.. .+.+|
T Consensus 5 ~~~~~lItG~s~giG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~~id 84 (263)
T PRK08226 5 TGKTALITGALQGIGEGIARVFARHGANLILLDISPEIEKLADELCGRGHRCTAVVADVRDPASVAAAIKRAKEKEGRID 84 (263)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 45789999999999999999888889999999988754333331 22321 1234443312222222221 13689
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++|.++|
T Consensus 85 ~vi~~ag 91 (263)
T PRK08226 85 ILVNNAG 91 (263)
T ss_pred EEEECCC
Confidence 9999888
|
|
| >PRK07889 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.96 E-value=0.0049 Score=53.10 Aligned_cols=81 Identities=15% Similarity=0.216 Sum_probs=51.7
Q ss_pred CCCEEEEecC--CcHHHHHHHHHHHHcCCEEEEEeCCh--hhHHHHHHHcCCC---eeEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSK--DKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga--~g~vG~~ai~la~~~ga~Vi~~~~s~--~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.+++|+|+ ++++|.+.++.+...|++|+.++++. +..+.+.++++.. ...|..+.....+.+.+.. .+.
T Consensus 6 ~~k~~lItGa~~s~GIG~a~a~~la~~G~~v~l~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~i~~~~~~~~~~~g~ 85 (256)
T PRK07889 6 EGKRILVTGVITDSSIAFHVARVAQEQGAEVVLTGFGRALRLTERIAKRLPEPAPVLELDVTNEEHLASLADRVREHVDG 85 (256)
T ss_pred cCCEEEEeCCCCcchHHHHHHHHHHHCCCEEEEecCccchhHHHHHHHhcCCCCcEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999 79999999988888999999988653 3334443244431 1234444312322232222 146
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 86 iD~li~nAG~ 95 (256)
T PRK07889 86 LDGVVHSIGF 95 (256)
T ss_pred CcEEEEcccc
Confidence 9999998874
|
|
| >PRK05565 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.95 E-value=0.011 Score=50.35 Aligned_cols=80 Identities=24% Similarity=0.348 Sum_probs=50.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHCC--CCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
+.++||+|++|++|...+..+...|++|+++ .++.++.+.+.+.+ +.. .+ .|..+...+.+.+.+... +++
T Consensus 5 ~~~ilI~Gasg~iG~~la~~l~~~g~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 84 (247)
T PRK05565 5 GKVAIVTGASGGIGRAIAELLAKEGAKVVIAYDINEEAAQELLEEIKEEGGDAIAVKADVSSEEDVENLVEQIVEKFGKI 84 (247)
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4689999999999999888877789999988 87776654443222 211 11 244443122222222211 259
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|.+|.+.|.
T Consensus 85 d~vi~~ag~ 93 (247)
T PRK05565 85 DILVNNAGI 93 (247)
T ss_pred CEEEECCCc
Confidence 999998874
|
|
| >PRK06935 2-deoxy-D-gluconate 3-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.94 E-value=0.0046 Score=53.30 Aligned_cols=80 Identities=16% Similarity=0.220 Sum_probs=51.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|++++++ ++.+.+.+ +.+.. . ..|..+...+...+.+.. .+.+
T Consensus 14 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~-~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~g~i 92 (258)
T PRK06935 14 DGKVAIVTGGNTGLGQGYAVALAKAGADIIITTHG-TNWDETRRLIEKEGRKVTFVQVDLTKPESAEKVVKEALEEFGKI 92 (258)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCC-cHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 46899999999999999999998899999999887 33333321 23321 1 234444312222233221 1368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.+.|.
T Consensus 93 d~li~~ag~ 101 (258)
T PRK06935 93 DILVNNAGT 101 (258)
T ss_pred CEEEECCCC
Confidence 999998873
|
|
| >PRK07791 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.93 E-value=0.0059 Score=53.59 Aligned_cols=82 Identities=17% Similarity=0.191 Sum_probs=51.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh---------hhHHHHHHHc---CCC-ee--EecCCchhHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---------DKIDLLKNKF---GFD-EA--FNYKEEPDLNEAL 215 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~---------~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i 215 (342)
..+.++||+|+++++|.+.++.+...|++|++++++. ++.+.+.+++ +.. .. .|..+..+..+.+
T Consensus 4 l~~k~~lITGas~GIG~aia~~la~~G~~vii~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~ 83 (286)
T PRK07791 4 LDGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSASGGSAAQAVVDEIVAAGGEAVANGDDIADWDGAANLV 83 (286)
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEeeCCccccccccchhHHHHHHHHHHhcCCceEEEeCCCCCHHHHHHHH
Confidence 3578999999999999999988888999999887654 3333332232 322 11 2444431233333
Q ss_pred HHHC--CCCccEEEeCCCh
Q 019332 216 KRYF--PEGIDIYFENVGG 232 (342)
Q Consensus 216 ~~~~--~~~~d~vid~~g~ 232 (342)
.+.. .+.+|++++++|.
T Consensus 84 ~~~~~~~g~id~lv~nAG~ 102 (286)
T PRK07791 84 DAAVETFGGLDVLVNNAGI 102 (286)
T ss_pred HHHHHhcCCCCEEEECCCC
Confidence 3322 1469999999884
|
|
| >PRK12746 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.015 Score=49.90 Aligned_cols=80 Identities=18% Similarity=0.215 Sum_probs=50.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHH---C---
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRY---F--- 219 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~---~--- 219 (342)
+.+++|+|++|++|..+++.+...|++|++. .++.++.+.+.+++ +.. .+ .|..+..++.+.+++. .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~~ 85 (254)
T PRK12746 6 GKVALVTGASRGIGRAIAMRLANDGALVAIHYGRNKQAADETIREIESNGGKAFLIEADLNSIDGVKKLVEQLKNELQIR 85 (254)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCcCCHHHHHHHHHHHHHHhccc
Confidence 5789999999999999999888889988775 56665543332132 221 11 3444432333333332 1
Q ss_pred -C-CCccEEEeCCCh
Q 019332 220 -P-EGIDIYFENVGG 232 (342)
Q Consensus 220 -~-~~~d~vid~~g~ 232 (342)
+ +++|++|.+.|.
T Consensus 86 ~~~~~id~vi~~ag~ 100 (254)
T PRK12746 86 VGTSEIDILVNNAGI 100 (254)
T ss_pred cCCCCccEEEECCCC
Confidence 1 258999998874
|
|
| >PRK08416 7-alpha-hydroxysteroid dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0063 Score=52.50 Aligned_cols=80 Identities=15% Similarity=0.270 Sum_probs=50.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHH----cCCC-e--eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNK----FGFD-E--AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~----~g~~-~--v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||++++|.+.+..+...|++|+.+.+ ++++.+.+.++ .+.. . .+|..+..++.+.+.+.. .+
T Consensus 7 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 86 (260)
T PRK08416 7 KGKTLVISGGTRGIGKAIVYEFAQSGVNIAFTYNSNVEEANKIAEDLEQKYGIKAKAYPLNILEPETYKELFKKIDEDFD 86 (260)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhcC
Confidence 4679999999999999999988889999988765 34443332212 2321 1 234444323333333322 13
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
.+|++++++|
T Consensus 87 ~id~lv~nAg 96 (260)
T PRK08416 87 RVDFFISNAI 96 (260)
T ss_pred CccEEEECcc
Confidence 6899999885
|
|
| >PRK12826 3-ketoacyl-(acyl-carrier-protein) reductase; Reviewed | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0052 Score=52.49 Aligned_cols=81 Identities=17% Similarity=0.210 Sum_probs=52.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-ee--EecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-EA--FNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||+|++|...+..+...|++|++++++.++...+.+. .+.. .+ .|..+...+.+.+.+... +.+
T Consensus 5 ~~~~ilItGasg~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~ 84 (251)
T PRK12826 5 EGRVALVTGAARGIGRAIAVRLAADGAEVIVVDICGDDAAATAELVEAAGGKARARQVDVRDRAALKAAVAAGVEDFGRL 84 (251)
T ss_pred CCCEEEEcCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 357899999999999999988888899999999986654433212 2221 11 233333123333332221 258
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|.++.+.|.
T Consensus 85 d~vi~~ag~ 93 (251)
T PRK12826 85 DILVANAGI 93 (251)
T ss_pred CEEEECCCC
Confidence 999998864
|
|
| >PRK06124 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.92 E-value=0.0061 Score=52.38 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.+++|+|++|++|...++.+...|++|+.+.+++++.+.+.++ .+.. . ..|..+..++...+.+... +.+
T Consensus 10 ~~k~ilItGas~~IG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 89 (256)
T PRK06124 10 AGQVALVTGSARGLGFEIARALAGAGAHVLVNGRNAATLEAAVAALRAAGGAAEALAFDIADEEAVAAAFARIDAEHGRL 89 (256)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHcCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhcCCC
Confidence 578999999999999999988888899999999987665443322 2321 1 2344443233333332221 368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|.++.+.|.
T Consensus 90 d~vi~~ag~ 98 (256)
T PRK06124 90 DILVNNVGA 98 (256)
T ss_pred CEEEECCCC
Confidence 999998884
|
|
| >PRK04148 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0077 Score=45.79 Aligned_cols=86 Identities=13% Similarity=0.074 Sum_probs=54.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEec-CCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNY-KEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~-~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.++.++++.|. | .|...+..+...|.+|++++.+++..+.++ +.+...+.+. -++ ++ .+- +++|+++.+
T Consensus 15 ~~~~kileIG~-G-fG~~vA~~L~~~G~~ViaIDi~~~aV~~a~-~~~~~~v~dDlf~p-~~--~~y----~~a~liysi 84 (134)
T PRK04148 15 GKNKKIVELGI-G-FYFKVAKKLKESGFDVIVIDINEKAVEKAK-KLGLNAFVDDLFNP-NL--EIY----KNAKLIYSI 84 (134)
T ss_pred ccCCEEEEEEe-c-CCHHHHHHHHHCCCEEEEEECCHHHHHHHH-HhCCeEEECcCCCC-CH--HHH----hcCCEEEEe
Confidence 45678999996 6 887556666678999999999999888887 6666433211 111 11 111 147888877
Q ss_pred CCh-hhHHHHHHhhhhCC
Q 019332 230 VGG-KMLDAVLLNMKIHG 246 (342)
Q Consensus 230 ~g~-~~~~~~~~~l~~~G 246 (342)
--. +.....++..+.-|
T Consensus 85 rpp~el~~~~~~la~~~~ 102 (134)
T PRK04148 85 RPPRDLQPFILELAKKIN 102 (134)
T ss_pred CCCHHHHHHHHHHHHHcC
Confidence 776 44445555555444
|
|
| >PRK06398 aldose dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.91 E-value=0.0023 Score=55.23 Aligned_cols=75 Identities=15% Similarity=0.173 Sum_probs=49.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC--CCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF--PEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~--~~~~d~vid~ 229 (342)
.+.++||+|+++++|.+.+..+...|++|+++.+++.+...+. ....|..+..++.+.+.+.. .+.+|+++++
T Consensus 5 ~gk~vlItGas~gIG~~ia~~l~~~G~~Vi~~~r~~~~~~~~~-----~~~~D~~~~~~i~~~~~~~~~~~~~id~li~~ 79 (258)
T PRK06398 5 KDKVAIVTGGSQGIGKAVVNRLKEEGSNVINFDIKEPSYNDVD-----YFKVDVSNKEQVIKGIDYVISKYGRIDILVNN 79 (258)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCccccCceE-----EEEccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 3579999999999999999999999999999998765421110 01234444313333333322 1359999998
Q ss_pred CC
Q 019332 230 VG 231 (342)
Q Consensus 230 ~g 231 (342)
.|
T Consensus 80 Ag 81 (258)
T PRK06398 80 AG 81 (258)
T ss_pred CC
Confidence 87
|
|
| >PRK06113 7-alpha-hydroxysteroid dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.90 E-value=0.0054 Score=52.76 Aligned_cols=81 Identities=22% Similarity=0.330 Sum_probs=53.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+|+++++|...+..+...|++|+.++++.++.+.+.++ .+.. . ..|..+..+..+.+.+.. .+.+
T Consensus 10 ~~k~vlVtG~s~gIG~~la~~l~~~G~~vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~~ 89 (255)
T PRK06113 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFALSKLGKV 89 (255)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 468999999999999999998888899999999887765444322 2321 1 234444422333333221 1368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.+.|.
T Consensus 90 d~li~~ag~ 98 (255)
T PRK06113 90 DILVNNAGG 98 (255)
T ss_pred CEEEECCCC
Confidence 999999873
|
|
| >PRK08219 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.015 Score=48.89 Aligned_cols=74 Identities=15% Similarity=0.227 Sum_probs=49.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHCCC--CccEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFPE--GIDIYFEN 229 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~~--~~d~vid~ 229 (342)
.++||+|++|++|..++..+... .+|+++.++.++.+.+.++.....+ .|..+. +.+.+...+ ++|.++.+
T Consensus 4 ~~vlVtG~~g~iG~~l~~~l~~~-~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~----~~~~~~~~~~~~id~vi~~ 78 (227)
T PRK08219 4 PTALITGASRGIGAAIARELAPT-HTLLLGGRPAERLDELAAELPGATPFPVDLTDP----EAIAAAVEQLGRLDVLVHN 78 (227)
T ss_pred CEEEEecCCcHHHHHHHHHHHhh-CCEEEEeCCHHHHHHHHHHhccceEEecCCCCH----HHHHHHHHhcCCCCEEEEC
Confidence 47999999999999888777666 8999999988776655422211122 233332 233332222 69999999
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
+|.
T Consensus 79 ag~ 81 (227)
T PRK08219 79 AGV 81 (227)
T ss_pred CCc
Confidence 884
|
|
| >PRK08690 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.89 E-value=0.0051 Score=53.19 Aligned_cols=81 Identities=10% Similarity=0.153 Sum_probs=50.2
Q ss_pred CCCEEEEecC--CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH---HHcCCCe--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK---NKFGFDE--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga--~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+|| ++++|.+.++.+...|++|+.+.+++...+.++ ++.+... ..|-.+..+..+.+.+.. .++
T Consensus 5 ~~k~~lITGa~~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 84 (261)
T PRK08690 5 QGKKILITGMISERSIAYGIAKACREQGAELAFTYVVDKLEERVRKMAAELDSELVFRCDVASDDEINQVFADLGKHWDG 84 (261)
T ss_pred CCcEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHhccCCceEEECCCCCHHHHHHHHHHHHHHhCC
Confidence 4678999996 569999999888889999998876543222232 1223212 234444323333333322 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 85 iD~lVnnAG~ 94 (261)
T PRK08690 85 LDGLVHSIGF 94 (261)
T ss_pred CcEEEECCcc
Confidence 9999999874
|
|
| >PRK06940 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.88 E-value=0.022 Score=49.68 Aligned_cols=101 Identities=16% Similarity=0.169 Sum_probs=62.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC-CCCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF-PEGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~-~~~~d~v 226 (342)
.+++|+|+ |++|.+++..+. .|++|+++++++++.+.+.+++ +.. . ..|..+...+...+.+.. .+.+|++
T Consensus 3 k~~lItGa-~gIG~~la~~l~-~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~i~~~~~~~~~~g~id~l 80 (275)
T PRK06940 3 EVVVVIGA-GGIGQAIARRVG-AGKKVLLADYNEENLEAAAKTLREAGFDVSTQEVDVSSRESVKALAATAQTLGPVTGL 80 (275)
T ss_pred CEEEEECC-ChHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEeecCCHHHHHHHHHHHHhcCCCCEE
Confidence 57899997 799999888875 7999999999877655443233 321 1 234444423333333321 2469999
Q ss_pred EeCCChh----h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 227 FENVGGK----M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 227 id~~g~~----~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++++|.. . +..+.+.++.+|+++.+++...
T Consensus 81 i~nAG~~~~~~~~~~~~~vN~~g~~~l~~~~~~~m~~~g~iv~isS~~~ 129 (275)
T PRK06940 81 VHTAGVSPSQASPEAILKVDLYGTALVLEEFGKVIAPGGAGVVIASQSG 129 (275)
T ss_pred EECCCcCCchhhHHHHHHHhhHHHHHHHHHHHHHHhhCCCEEEEEeccc
Confidence 9999841 1 2334445566777777665443
|
|
| >TIGR02622 CDP_4_6_dhtase CDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.014 Score=52.89 Aligned_cols=76 Identities=18% Similarity=0.250 Sum_probs=50.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----C-eeEecCCchhHHHHHHHHCCC-CccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----D-EAFNYKEEPDLNEALKRYFPE-GIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~i~~~~~~-~~d~ 225 (342)
.|.+|||+||+|.+|.++++.+...|.+|+++.+++.......+.++. . ...|..+. +.+.+...+ ++|+
T Consensus 3 ~~k~ilItGatG~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d~ 78 (349)
T TIGR02622 3 QGKKVLVTGHTGFKGSWLSLWLLELGAEVYGYSLDPPTSPNLFELLNLAKKIEDHFGDIRDA----AKLRKAIAEFKPEI 78 (349)
T ss_pred CCCEEEEECCCChhHHHHHHHHHHCCCEEEEEeCCCccchhHHHHHhhcCCceEEEccCCCH----HHHHHHHhhcCCCE
Confidence 357899999999999999999988999999998776543322112221 1 11233332 233333333 5899
Q ss_pred EEeCCC
Q 019332 226 YFENVG 231 (342)
Q Consensus 226 vid~~g 231 (342)
|+++++
T Consensus 79 vih~A~ 84 (349)
T TIGR02622 79 VFHLAA 84 (349)
T ss_pred EEECCc
Confidence 999987
|
Members of this protein family are CDP-glucose 4,6-dehydratase from a variety of Gram-negative and Gram-positive bacteria. Members typically are encoded next to a gene that encodes a glucose-1-phosphate cytidylyltransferase, which produces the substrate, CDP-D-glucose, used by this enzyme to produce CDP-4-keto-6-deoxyglucose. |
| >COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane] | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0071 Score=52.06 Aligned_cols=104 Identities=21% Similarity=0.246 Sum_probs=74.8
Q ss_pred hHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-e--e--EecCCchh
Q 019332 139 TAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-E--A--FNYKEEPD 210 (342)
Q Consensus 139 ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~--v--~~~~~~~~ 210 (342)
.++..+.+..++++|++||=+| .|-|.+++..|+..|++|++++-|+++.+.+++ +.|.. . + -|+++.
T Consensus 59 ~k~~~~~~kl~L~~G~~lLDiG--CGWG~l~~~aA~~y~v~V~GvTlS~~Q~~~~~~r~~~~gl~~~v~v~l~d~rd~-- 134 (283)
T COG2230 59 AKLDLILEKLGLKPGMTLLDIG--CGWGGLAIYAAEEYGVTVVGVTLSEEQLAYAEKRIAARGLEDNVEVRLQDYRDF-- 134 (283)
T ss_pred HHHHHHHHhcCCCCCCEEEEeC--CChhHHHHHHHHHcCCEEEEeeCCHHHHHHHHHHHHHcCCCcccEEEecccccc--
Confidence 4455566778999999999999 678999999999999999999999998887774 34543 1 1 123221
Q ss_pred HHHHHHHHCCCCccEEE-----eCCCh----hhHHHHHHhhhhCCEEEEEceec
Q 019332 211 LNEALKRYFPEGIDIYF-----ENVGG----KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 211 ~~~~i~~~~~~~~d~vi-----d~~g~----~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
. +.||-|. +.+|. ..+..+.++|+++|++++-....
T Consensus 135 --------~-e~fDrIvSvgmfEhvg~~~~~~ff~~~~~~L~~~G~~llh~I~~ 179 (283)
T COG2230 135 --------E-EPFDRIVSVGMFEHVGKENYDDFFKKVYALLKPGGRMLLHSITG 179 (283)
T ss_pred --------c-cccceeeehhhHHHhCcccHHHHHHHHHhhcCCCceEEEEEecC
Confidence 1 1367663 34443 36778889999999988665543
|
|
| >TIGR00438 rrmJ cell division protein FtsJ | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.018 Score=47.12 Aligned_cols=98 Identities=17% Similarity=0.153 Sum_probs=62.1
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHc-C-CEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCC-C
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLL-G-CYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPE-G 222 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-g-a~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~-~ 222 (342)
...++++++||..|+ |+ |..+..+++.. + .+|++++.++.. . ..++.. ..|..+. ...+.+++...+ +
T Consensus 27 ~~~i~~g~~VLDiG~-Gt-G~~~~~l~~~~~~~~~v~~vDis~~~----~-~~~i~~~~~d~~~~-~~~~~l~~~~~~~~ 98 (188)
T TIGR00438 27 FKLIKPGDTVLDLGA-AP-GGWSQVAVEQVGGKGRVIAVDLQPMK----P-IENVDFIRGDFTDE-EVLNKIRERVGDDK 98 (188)
T ss_pred hcccCCCCEEEEecC-CC-CHHHHHHHHHhCCCceEEEEeccccc----c-CCCceEEEeeCCCh-hHHHHHHHHhCCCC
Confidence 356789999999995 43 33444555443 3 489999988754 2 223322 1244443 445556665555 7
Q ss_pred ccEEEe-C----CC-------------hhhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFE-N----VG-------------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid-~----~g-------------~~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+|+. . .| ...+..+.++|+++|+++...
T Consensus 99 ~D~V~~~~~~~~~g~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lvi~~ 146 (188)
T TIGR00438 99 VDVVMSDAAPNISGYWDIDHLRSIDLVELALDIAKEVLKPKGNFVVKV 146 (188)
T ss_pred ccEEEcCCCCCCCCCccccHHHHHHHHHHHHHHHHHHccCCCEEEEEE
Confidence 999995 2 12 135667888999999998754
|
|
| >PRK05650 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.0062 Score=52.86 Aligned_cols=78 Identities=17% Similarity=0.130 Sum_probs=51.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHC--CCCccEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
++||+|++|++|...++.+...|++|++++++.++.+.+.+.+ +.. .+ .|..+..++.+.+.... .+++|++
T Consensus 2 ~vlVtGasggIG~~la~~l~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~i~~~~~~id~l 81 (270)
T PRK05650 2 RVMITGAASGLGRAIALRWAREGWRLALADVNEEGGEETLKLLREAGGDGFYQRCDVRDYSQLTALAQACEEKWGGIDVI 81 (270)
T ss_pred EEEEecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 6899999999999988888888999999999887655433222 322 11 23333312222222221 1369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 82 I~~ag~ 87 (270)
T PRK05650 82 VNNAGV 87 (270)
T ss_pred EECCCC
Confidence 999884
|
|
| >PRK13942 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.85 E-value=0.016 Score=48.33 Aligned_cols=98 Identities=17% Similarity=0.193 Sum_probs=66.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHH---cCCCe--eEecCCchhHHHHHHHH
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNK---FGFDE--AFNYKEEPDLNEALKRY 218 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~i~~~ 218 (342)
...+++++++||-.| +|.|..+..+++..+ .+|+++..+++-.+.+++. .|... ++.. +..+...
T Consensus 70 ~~l~~~~g~~VLdIG--~GsG~~t~~la~~~~~~~~V~~vE~~~~~~~~a~~~l~~~g~~~v~~~~g----d~~~~~~-- 141 (212)
T PRK13942 70 ELLDLKEGMKVLEIG--TGSGYHAAVVAEIVGKSGKVVTIERIPELAEKAKKTLKKLGYDNVEVIVG----DGTLGYE-- 141 (212)
T ss_pred HHcCCCCcCEEEEEC--CcccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCeEEEEC----CcccCCC--
Confidence 456789999999999 577888888888775 5999999998877666533 34322 2222 1111110
Q ss_pred CCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 219 FPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 219 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
..+.||.|+-.... .......+.|+++|+++..
T Consensus 142 ~~~~fD~I~~~~~~~~~~~~l~~~LkpgG~lvi~ 175 (212)
T PRK13942 142 ENAPYDRIYVTAAGPDIPKPLIEQLKDGGIMVIP 175 (212)
T ss_pred cCCCcCEEEECCCcccchHHHHHhhCCCcEEEEE
Confidence 11369998654443 5567788999999998764
|
|
| >PF01596 Methyltransf_3: O-methyltransferase; InterPro: IPR002935 Members of this family are O-methyltransferases | Back alignment and domain information |
|---|
Probab=96.84 E-value=0.0028 Score=52.45 Aligned_cols=103 Identities=15% Similarity=0.133 Sum_probs=70.7
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC--
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF-- 219 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~-- 219 (342)
..+.....+||-+| +++|+.++.+|+.+ +.+|+.+..++++.+.+++ +.|....+..... +..+.+.++.
T Consensus 40 l~~~~~~k~vLEIG--t~~GySal~la~~l~~~g~i~tiE~~~~~~~~A~~~~~~ag~~~~I~~~~g-da~~~l~~l~~~ 116 (205)
T PF01596_consen 40 LVRLTRPKRVLEIG--TFTGYSALWLAEALPEDGKITTIEIDPERAEIARENFRKAGLDDRIEVIEG-DALEVLPELAND 116 (205)
T ss_dssp HHHHHT-SEEEEES--TTTSHHHHHHHHTSTTTSEEEEEESSHHHHHHHHHHHHHTTGGGGEEEEES--HHHHHHHHHHT
T ss_pred HHHhcCCceEEEec--cccccHHHHHHHhhcccceEEEecCcHHHHHHHHHHHHhcCCCCcEEEEEe-ccHhhHHHHHhc
Confidence 34455667999999 78899999999876 5699999999988877753 3455433333333 4445555432
Q ss_pred --CCCccEE-EeCCCh---hhHHHHHHhhhhCCEEEEEc
Q 019332 220 --PEGIDIY-FENVGG---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 --~~~~d~v-id~~g~---~~~~~~~~~l~~~G~~v~~g 252 (342)
.+.||+| +|+.-. ..+..++++|+++|.++.=.
T Consensus 117 ~~~~~fD~VFiDa~K~~y~~y~~~~~~ll~~ggvii~DN 155 (205)
T PF01596_consen 117 GEEGQFDFVFIDADKRNYLEYFEKALPLLRPGGVIIADN 155 (205)
T ss_dssp TTTTSEEEEEEESTGGGHHHHHHHHHHHEEEEEEEEEET
T ss_pred cCCCceeEEEEcccccchhhHHHHHhhhccCCeEEEEcc
Confidence 1369987 555544 35778889999999988643
|
The family includes also bacterial O-methyltransferases that may be involved in antibiotic production [].; GO: 0008171 O-methyltransferase activity; PDB: 1SUI_C 1SUS_D 3CBG_A 2GPY_B 3TR6_A 2AVD_A 3DUL_B 3DUW_B 2ZTH_A 1VID_A .... |
| >PLN02657 3,8-divinyl protochlorophyllide a 8-vinyl reductase | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.021 Score=52.49 Aligned_cols=106 Identities=17% Similarity=0.166 Sum_probs=65.0
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHH------HHHHHc-CCCe-eEecCCchhHHHHHHHHCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID------LLKNKF-GFDE-AFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~------~~~~~~-g~~~-v~~~~~~~~~~~~i~~~~~ 220 (342)
+-..+.+|||+||+|.+|..+++.+...|.+|++++++..+.+ ...+.. ++.. ..|..+...+.+.++.. +
T Consensus 56 ~~~~~~kVLVtGatG~IG~~l~~~Ll~~G~~V~~l~R~~~~~~~~~~~~~~~~~~~~v~~v~~Dl~d~~~l~~~~~~~-~ 134 (390)
T PLN02657 56 KEPKDVTVLVVGATGYIGKFVVRELVRRGYNVVAVAREKSGIRGKNGKEDTKKELPGAEVVFGDVTDADSLRKVLFSE-G 134 (390)
T ss_pred cCCCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEEechhhccccchhhHHhhhcCCceEEEeeCCCHHHHHHHHHHh-C
Confidence 3456779999999999999999988888999999998765421 111011 2221 23555441333333322 1
Q ss_pred CCccEEEeCCChh------h-------HHHHHHhhhhC--CEEEEEceec
Q 019332 221 EGIDIYFENVGGK------M-------LDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 221 ~~~d~vid~~g~~------~-------~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
.++|+||+|++.. . ...+++.++.. +++|.++...
T Consensus 135 ~~~D~Vi~~aa~~~~~~~~~~~vn~~~~~~ll~aa~~~gv~r~V~iSS~~ 184 (390)
T PLN02657 135 DPVDVVVSCLASRTGGVKDSWKIDYQATKNSLDAGREVGAKHFVLLSAIC 184 (390)
T ss_pred CCCcEEEECCccCCCCCccchhhHHHHHHHHHHHHHHcCCCEEEEEeecc
Confidence 1699999998741 1 12344444443 4788877643
|
|
| >PF00106 adh_short: short chain dehydrogenase alcohol dehydrogenase superfamily signature glucose/ribitol dehydrogenase family signature; InterPro: IPR002198 The short-chain dehydrogenases/reductases family (SDR) [] is a very large family of enzymes, most of which are known to be NAD- or NADP-dependent oxidoreductases | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0044 Score=49.36 Aligned_cols=79 Identities=18% Similarity=0.253 Sum_probs=49.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC--hhhHHHHHHH---cCCC-ee--EecCCchhHHHHHHHHC--CCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS--KDKIDLLKNK---FGFD-EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s--~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.++||+||++++|.+.++.+...|+ +|+.+.++ .++.+.+.++ .+.. .+ .|..+..++...+.+.. .+.
T Consensus 1 k~~lItGa~~giG~~~a~~l~~~g~~~v~~~~r~~~~~~~~~l~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 80 (167)
T PF00106_consen 1 KTVLITGASSGIGRALARALARRGARVVILTSRSEDSEGAQELIQELKAPGAKITFIECDLSDPESIRALIEEVIKRFGP 80 (167)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTTTEEEEEEESSCHHHHHHHHHHHHHHTTSEEEEEESETTSHHHHHHHHHHHHHHHSS
T ss_pred CEEEEECCCCHHHHHHHHHHHhcCceEEEEeeeccccccccccccccccccccccccccccccccccccccccccccccc
Confidence 3789999999999988887777777 78888888 4444433223 3431 12 23333323333333332 236
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++|.+.|.
T Consensus 81 ld~li~~ag~ 90 (167)
T PF00106_consen 81 LDILINNAGI 90 (167)
T ss_dssp ESEEEEECSC
T ss_pred cccccccccc
Confidence 9999999884
|
As the first member of this family to be characterised was Drosophila alcohol dehydrogenase, this family used to be called [, , ] 'insect-type', or 'short-chain' alcohol dehydrogenases. Most member of this family are proteins of about 250 to 300 amino acid residues. Most dehydrogenases possess at least 2 domains [], the first binding the coenzyme, often NAD, and the second binding the substrate. This latter domain determines the substrate specificity and contains amino acids involved in catalysis. Little sequence similarity has been found in the coenzyme binding domain although there is a large degree of structural similarity, and it has therefore been suggested that the structure of dehydrogenases has arisen through gene fusion of a common ancestral coenzyme nucleotide sequence with various substrate specific domains [].; GO: 0016491 oxidoreductase activity, 0008152 metabolic process; PDB: 3QWI_D 3QWF_G 3IS3_A 3QWH_C 3ITD_A 3L77_A 1HDC_C 2HSD_C 3KVO_A 3KZV_A .... |
| >PRK07097 gluconate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.83 E-value=0.0098 Score=51.46 Aligned_cols=80 Identities=19% Similarity=0.274 Sum_probs=53.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHH---HHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLN---EALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~---~~i~~~~~~~ 222 (342)
.+.+++|+|+++++|.+.+..+...|++|+++.+++++.+.+.+. .+.. . ..|-.+..... +++.+.. +.
T Consensus 9 ~~k~~lItGa~~~iG~~ia~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 87 (265)
T PRK07097 9 KGKIALITGASYGIGFAIAKAYAKAGATIVFNDINQELVDKGLAAYRELGIEAHGYVCDVTDEDGVQAMVSQIEKEV-GV 87 (265)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHhC-CC
Confidence 567899999999999998888888899999999888765543322 2332 1 23443331222 2232222 35
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++.+.|.
T Consensus 88 id~li~~ag~ 97 (265)
T PRK07097 88 IDILVNNAGI 97 (265)
T ss_pred CCEEEECCCC
Confidence 8999999884
|
|
| >PRK08993 2-deoxy-D-gluconate 3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.008 Score=51.63 Aligned_cols=80 Identities=20% Similarity=0.274 Sum_probs=50.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+|++|++|.++++.+...|++|+.+.+++.+ .+.+. +.+.. . ..|-.+..++.+.+.+.. .+.+|
T Consensus 9 ~~k~~lItG~~~gIG~a~a~~l~~~G~~vv~~~~~~~~~~~~~~~-~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~~D 87 (253)
T PRK08993 9 EGKVAVVTGCDTGLGQGMALGLAEAGCDIVGINIVEPTETIEQVT-ALGRRFLSLTADLRKIDGIPALLERAVAEFGHID 87 (253)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEecCcchHHHHHHHH-hcCCeEEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 36799999999999999999998899999987654422 22333 33321 1 123333212333333322 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 88 ~li~~Ag~ 95 (253)
T PRK08993 88 ILVNNAGL 95 (253)
T ss_pred EEEECCCC
Confidence 99999884
|
|
| >PRK07577 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.82 E-value=0.0058 Score=51.70 Aligned_cols=74 Identities=23% Similarity=0.237 Sum_probs=50.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCC-CccEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPE-GIDIYFENV 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~ 230 (342)
+.++||+|++|++|...++.+...|++|+++.++.++ . +... ...|..+...+.+.+.+.... ++|+++.+.
T Consensus 3 ~k~vlItG~s~~iG~~ia~~l~~~G~~v~~~~r~~~~-~-----~~~~~~~~D~~~~~~~~~~~~~~~~~~~~d~vi~~a 76 (234)
T PRK07577 3 SRTVLVTGATKGIGLALSLRLANLGHQVIGIARSAID-D-----FPGELFACDLADIEQTAATLAQINEIHPVDAIVNNV 76 (234)
T ss_pred CCEEEEECCCCcHHHHHHHHHHHCCCEEEEEeCCccc-c-----cCceEEEeeCCCHHHHHHHHHHHHHhCCCcEEEECC
Confidence 5689999999999999999888899999999987654 1 1111 224544442333334433322 689999988
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
|.
T Consensus 77 g~ 78 (234)
T PRK07577 77 GI 78 (234)
T ss_pred CC
Confidence 84
|
|
| >TIGR03206 benzo_BadH 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase | Back alignment and domain information |
|---|
Probab=96.81 E-value=0.0072 Score=51.65 Aligned_cols=80 Identities=13% Similarity=0.202 Sum_probs=53.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-ee--EecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EA--FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v--~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
++.++||+||+|++|..+++.+...|++|+.++++.++.+.+.+.+ +.. .+ .|..+...+.+.+++.. .+.+
T Consensus 2 ~~~~ilItGas~~iG~~la~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~ 81 (250)
T TIGR03206 2 KDKTAIVTGGGGGIGGATCRRFAEEGAKVAVFDLNREAAEKVAADIRAKGGNAQAFACDITDRDSVDTAVAAAEQALGPV 81 (250)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999998889999999998887655443222 221 12 23333312333333222 1368
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++|.+.|
T Consensus 82 d~vi~~ag 89 (250)
T TIGR03206 82 DVLVNNAG 89 (250)
T ss_pred CEEEECCC
Confidence 99999997
|
Members of this protein family are the enzyme 2-hydroxycyclohexanecarboxyl-CoA dehydrogenase. The enzymatic properties were confirmed experimentally in Rhodopseudomonas palustris; the enzyme is homotetrameric, and not sensitive to oxygen. This enzyme is part of proposed pathway for degradation of benzoyl-CoA to 3-hydroxypimeloyl-CoA that differs from the analogous in Thauera aromatica. It also may occur in degradation of the non-aromatic compound cyclohexane-1-carboxylate. |
| >PRK08220 2,3-dihydroxybenzoate-2,3-dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.80 E-value=0.019 Score=49.14 Aligned_cols=75 Identities=16% Similarity=0.298 Sum_probs=49.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+|++|++|...++.+...|++|++++++. +. ..+.. . ..|..+...+.+.+.+... +.+|++
T Consensus 7 ~~k~vlItGas~~iG~~la~~l~~~G~~v~~~~~~~-----~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (252)
T PRK08220 7 SGKTVWVTGAAQGIGYAVALAFVEAGAKVIGFDQAF-----LT-QEDYPFATFVLDVSDAAAVAQVCQRLLAETGPLDVL 80 (252)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecch-----hh-hcCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 457899999999999999998888899999999875 22 22221 1 1344333123333332221 358999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|++.|.
T Consensus 81 i~~ag~ 86 (252)
T PRK08220 81 VNAAGI 86 (252)
T ss_pred EECCCc
Confidence 999884
|
|
| >PRK05599 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0069 Score=51.85 Aligned_cols=76 Identities=14% Similarity=0.166 Sum_probs=50.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC--e--eEecCCchh---HHHHHHHHCCCCcc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD--E--AFNYKEEPD---LNEALKRYFPEGID 224 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~--~--v~~~~~~~~---~~~~i~~~~~~~~d 224 (342)
+++|+|+++++|.+.++... .|++|+.+.+++++.+.+.+++ |.. . .+|..+... +.+.+.+.. +.+|
T Consensus 2 ~vlItGas~GIG~aia~~l~-~g~~Vil~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~id 79 (246)
T PRK05599 2 SILILGGTSDIAGEIATLLC-HGEDVVLAARRPEAAQGLASDLRQRGATSVHVLSFDAQDLDTHRELVKQTQELA-GEIS 79 (246)
T ss_pred eEEEEeCccHHHHHHHHHHh-CCCEEEEEeCCHHHHHHHHHHHHhccCCceEEEEcccCCHHHHHHHHHHHHHhc-CCCC
Confidence 68999999999998777665 4999999999888776554333 322 1 234444312 233333322 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 80 ~lv~nag~ 87 (246)
T PRK05599 80 LAVVAFGI 87 (246)
T ss_pred EEEEecCc
Confidence 99998874
|
|
| >PRK08303 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.79 E-value=0.0089 Score=52.99 Aligned_cols=35 Identities=17% Similarity=0.232 Sum_probs=32.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
.+.++||+|+++++|.+.++.+...|++|++++++
T Consensus 7 ~~k~~lITGgs~GIG~aia~~la~~G~~Vv~~~r~ 41 (305)
T PRK08303 7 RGKVALVAGATRGAGRGIAVELGAAGATVYVTGRS 41 (305)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEecc
Confidence 46799999999999999999998899999999886
|
|
| >PRK12384 sorbitol-6-phosphate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.78 E-value=0.0093 Score=51.34 Aligned_cols=79 Identities=11% Similarity=0.097 Sum_probs=51.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----cCCC--ee--EecCCchhHHHHHHHHC--CCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK----FGFD--EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~----~g~~--~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
+.++||+|++|++|.+.++.+...|++|+.++++.++.+.+.++ .+.. .. .|..+..+....+.+.. .+.
T Consensus 2 ~k~ilItG~~~~IG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~~~~~~~ 81 (259)
T PRK12384 2 NQVAVVIGGGQTLGAFLCHGLAEEGYRVAVADINSEKAANVAQEINAEYGEGMAYGFGADATSEQSVLALSRGVDEIFGR 81 (259)
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCceeEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46899999999999999988888899999999887655443312 2211 11 24443312222222221 136
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|.++++.|
T Consensus 82 id~vv~~ag 90 (259)
T PRK12384 82 VDLLVYNAG 90 (259)
T ss_pred CCEEEECCC
Confidence 899999987
|
|
| >PRK07984 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0087 Score=51.78 Aligned_cols=80 Identities=10% Similarity=0.236 Sum_probs=50.1
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHcCCCe--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||++ ++|.+.++.+...|++|+...+++. ..+.+..+.+... ..|-.+..++.+.+.+... +.
T Consensus 5 ~~k~~lITGas~~~GIG~aia~~la~~G~~vil~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 84 (262)
T PRK07984 5 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLPCDVAEDASIDAMFAELGKVWPK 84 (262)
T ss_pred CCCEEEEeCCCCCccHHHHHHHHHHHCCCEEEEEecchhHHHHHHHHHhccCCceEeecCCCCHHHHHHHHHHHHhhcCC
Confidence 467999999975 8999988888888999998887632 2222221222211 2344444233333333222 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 85 iD~linnAg 93 (262)
T PRK07984 85 FDGFVHSIG 93 (262)
T ss_pred CCEEEECCc
Confidence 999999997
|
|
| >PRK12743 oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0094 Score=51.29 Aligned_cols=79 Identities=15% Similarity=0.251 Sum_probs=49.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHH---HcCCC-ee--EecCCchhH---HHHHHHHCCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKN---KFGFD-EA--FNYKEEPDL---NEALKRYFPEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~---~~g~~-~v--~~~~~~~~~---~~~i~~~~~~~ 222 (342)
+.++||+||+|++|..+++.+...|++|+.+.++ .++.+.+.+ ..+.. .. .|..+...+ .+++.+.. +.
T Consensus 2 ~k~vlItGas~giG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~-~~ 80 (256)
T PRK12743 2 AQVAIVTASDSGIGKACALLLAQQGFDIGITWHSDEEGAKETAEEVRSHGVRAEIRQLDLSDLPEGAQALDKLIQRL-GR 80 (256)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 4689999999999999999998899999887653 333332221 33432 22 344443122 22333222 35
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++.+.|.
T Consensus 81 id~li~~ag~ 90 (256)
T PRK12743 81 IDVLVNNAGA 90 (256)
T ss_pred CCEEEECCCC
Confidence 8999998873
|
|
| >PRK13944 protein-L-isoaspartate O-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.012 Score=48.94 Aligned_cols=101 Identities=14% Similarity=0.151 Sum_probs=65.3
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
+...++++++||=.| .|.|..+..+++..+ .+|++++.+++-.+.+++ +.+....+..... +..+.+.. .
T Consensus 66 ~~l~~~~~~~VLDiG--~GsG~~~~~la~~~~~~g~V~~iD~~~~~~~~a~~~l~~~~~~~~v~~~~~-d~~~~~~~--~ 140 (205)
T PRK13944 66 ELIEPRPGMKILEVG--TGSGYQAAVCAEAIERRGKVYTVEIVKELAIYAAQNIERLGYWGVVEVYHG-DGKRGLEK--H 140 (205)
T ss_pred HhcCCCCCCEEEEEC--cCccHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcEEEEEC-CcccCCcc--C
Confidence 456678999999998 467888888888764 599999999876665553 2343211111111 22111111 1
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.+|.|+-+... .......+.|+++|+++..
T Consensus 141 ~~fD~Ii~~~~~~~~~~~l~~~L~~gG~lvi~ 172 (205)
T PRK13944 141 APFDAIIVTAAASTIPSALVRQLKDGGVLVIP 172 (205)
T ss_pred CCccEEEEccCcchhhHHHHHhcCcCcEEEEE
Confidence 369998866554 4556778999999998753
|
|
| >PRK08278 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.77 E-value=0.0095 Score=51.86 Aligned_cols=81 Identities=23% Similarity=0.309 Sum_probs=51.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-------HHHHHH---HcCCC-e--eEecCCchhHHHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------IDLLKN---KFGFD-E--AFNYKEEPDLNEALKRY 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-------~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~ 218 (342)
.+.++||+||+|++|...++.+...|++|++++++.++ .+.+.+ ..+.. . ..|..+...+.+.+.+.
T Consensus 5 ~~k~vlItGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~D~~~~~~i~~~~~~~ 84 (273)
T PRK08278 5 SGKTLFITGASRGIGLAIALRAARDGANIVIAAKTAEPHPKLPGTIHTAAEEIEAAGGQALPLVGDVRDEDQVAAAVAKA 84 (273)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecccccccchhhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHH
Confidence 45689999999999999999888889999999986542 111111 23332 1 23444432233323222
Q ss_pred CC--CCccEEEeCCCh
Q 019332 219 FP--EGIDIYFENVGG 232 (342)
Q Consensus 219 ~~--~~~d~vid~~g~ 232 (342)
.. +.+|++|+++|.
T Consensus 85 ~~~~g~id~li~~ag~ 100 (273)
T PRK08278 85 VERFGGIDICVNNASA 100 (273)
T ss_pred HHHhCCCCEEEECCCC
Confidence 11 369999999884
|
|
| >PF00670 AdoHcyase_NAD: S-adenosyl-L-homocysteine hydrolase, NAD binding domain; InterPro: IPR015878 S-adenosyl-L-homocysteine hydrolase (3 | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.013 Score=46.10 Aligned_cols=100 Identities=23% Similarity=0.249 Sum_probs=63.9
Q ss_pred HHhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC
Q 019332 141 YAGFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 141 ~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
+.++.+. .-.-.|.+++|.|- |-+|.-.++.++.+|++|+++..++-+.-.+. .-|.. +. .+.+.++
T Consensus 10 ~d~i~r~t~~~l~Gk~vvV~GY-G~vG~g~A~~lr~~Ga~V~V~e~DPi~alqA~-~dGf~-v~------~~~~a~~--- 77 (162)
T PF00670_consen 10 VDGIMRATNLMLAGKRVVVIGY-GKVGKGIARALRGLGARVTVTEIDPIRALQAA-MDGFE-VM------TLEEALR--- 77 (162)
T ss_dssp HHHHHHHH-S--TTSEEEEE---SHHHHHHHHHHHHTT-EEEEE-SSHHHHHHHH-HTT-E-EE-------HHHHTT---
T ss_pred HHHHHhcCceeeCCCEEEEeCC-CcccHHHHHHHhhCCCEEEEEECChHHHHHhh-hcCcE-ec------CHHHHHh---
Confidence 3344333 33568899999995 99999999999999999999999997765555 45552 22 2222222
Q ss_pred CCCccEEEeCCChhh--HHHHHHhhhhCCEEEEEcee
Q 019332 220 PEGIDIYFENVGGKM--LDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 220 ~~~~d~vid~~g~~~--~~~~~~~l~~~G~~v~~g~~ 254 (342)
..|+++.+.|... -..-++.|+++..+..+|..
T Consensus 78 --~adi~vtaTG~~~vi~~e~~~~mkdgail~n~Gh~ 112 (162)
T PF00670_consen 78 --DADIFVTATGNKDVITGEHFRQMKDGAILANAGHF 112 (162)
T ss_dssp --T-SEEEE-SSSSSSB-HHHHHHS-TTEEEEESSSS
T ss_pred --hCCEEEECCCCccccCHHHHHHhcCCeEEeccCcC
Confidence 3799999999843 35778888888888777753
|
3.1.1 from EC) (AdoHcyase) is an enzyme of the activated methyl cycle, responsible for the reversible hydration of S-adenosyl-L-homocysteine into adenosine and homocysteine. AdoHcyase is an ubiquitous enzyme which binds and requires NAD+ as a cofactor. AdoHcyase is a highly conserved protein [] of about 430 to 470 amino acids. This entry represents the glycine-rich region in the central part of AdoHcyase, which is thought to be involved in NAD-binding.; GO: 0004013 adenosylhomocysteinase activity; PDB: 2ZJ1_C 3DHY_B 2ZIZ_C 2ZJ0_D 3CE6_B 3GLQ_B 3D64_A 3G1U_C 1A7A_A 3NJ4_C .... |
| >PRK08309 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.75 E-value=0.14 Score=41.45 Aligned_cols=91 Identities=14% Similarity=0.124 Sum_probs=56.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---ee--EecCCchhHHHHHHHHC--CCCccEEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EA--FNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v--~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
+++|+|++ ++|..+++.+...|++|++..+++++.+.+...++.. .. .|..+..++...+.... .+.+|+++
T Consensus 2 ~vlVtGGt-G~gg~la~~L~~~G~~V~v~~R~~~~~~~l~~~l~~~~~i~~~~~Dv~d~~sv~~~i~~~l~~~g~id~lv 80 (177)
T PRK08309 2 HALVIGGT-GMLKRVSLWLCEKGFHVSVIARREVKLENVKRESTTPESITPLPLDYHDDDALKLAIKSTIEKNGPFDLAV 80 (177)
T ss_pred EEEEECcC-HHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHhhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCCeEEE
Confidence 58999997 4555566666667999999999887766554234321 11 36665424444444432 23689999
Q ss_pred eCCChhhHHHHHHhhhhCC
Q 019332 228 ENVGGKMLDAVLLNMKIHG 246 (342)
Q Consensus 228 d~~g~~~~~~~~~~l~~~G 246 (342)
+.+-...-.......+..|
T Consensus 81 ~~vh~~~~~~~~~~~~~~g 99 (177)
T PRK08309 81 AWIHSSAKDALSVVCRELD 99 (177)
T ss_pred EeccccchhhHHHHHHHHc
Confidence 8887765555555555554
|
|
| >PRK06997 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.0076 Score=52.09 Aligned_cols=81 Identities=16% Similarity=0.254 Sum_probs=50.7
Q ss_pred CCCEEEEecC--CcHHHHHHHHHHHHcCCEEEEEeCC---hhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGS---KDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga--~g~vG~~ai~la~~~ga~Vi~~~~s---~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+|| ++++|.+.++.+...|++|+.+.+. +++.+.+.++++... ..|-.+..++.+.+.+... +.
T Consensus 5 ~~k~vlItGas~~~GIG~a~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 84 (260)
T PRK06997 5 AGKRILITGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSDLVFPCDVASDEQIDALFASLGQHWDG 84 (260)
T ss_pred CCcEEEEeCCCCCCcHHHHHHHHHHHCCCeEEEEccchHHHHHHHHHHHhcCCcceeeccCCCHHHHHHHHHHHHHHhCC
Confidence 4679999996 5799999888888899999887543 333333332444321 2344443233333333322 46
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 85 iD~lvnnAG~ 94 (260)
T PRK06997 85 LDGLVHSIGF 94 (260)
T ss_pred CcEEEEcccc
Confidence 9999998873
|
|
| >KOG1252 consensus Cystathionine beta-synthase and related enzymes [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.13 Score=44.95 Aligned_cols=54 Identities=26% Similarity=0.278 Sum_probs=46.6
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCe
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDE 201 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~ 201 (342)
.+.+.||.++||-.-+|.+|...+-.|...|+++|++-. +.+|...++ .||+.-
T Consensus 97 ~G~i~pg~stliEpTSGNtGigLA~~~a~~Gyk~i~tmP~~ms~Ek~~~l~-a~Gaei 153 (362)
T KOG1252|consen 97 KGLITPGKSTLIEPTSGNTGIGLAYMAALRGYKCIITMPEKMSKEKRILLR-ALGAEI 153 (362)
T ss_pred cCCccCCceEEEecCCCchHHHHHHHHHHcCceEEEEechhhhHHHHHHHH-HcCCEE
Confidence 377999999999999999999999999999999998875 447778888 898843
|
|
| >PRK08945 putative oxoacyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.74 E-value=0.01 Score=50.74 Aligned_cols=84 Identities=11% Similarity=0.140 Sum_probs=53.5
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC--ee--EecC--CchhHHHHHHHHC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD--EA--FNYK--EEPDLNEALKRYF 219 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~--~v--~~~~--~~~~~~~~i~~~~ 219 (342)
+..++.+++|+|++|++|...++.+...|++|++++++.++.+.+.++ .+.. .+ .|.. +..++.+.+....
T Consensus 8 ~~~~~k~vlItG~~g~iG~~la~~l~~~G~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~ 87 (247)
T PRK08945 8 DLLKDRIILVTGAGDGIGREAALTYARHGATVILLGRTEEKLEAVYDEIEAAGGPQPAIIPLDLLTATPQNYQQLADTIE 87 (247)
T ss_pred cccCCCEEEEeCCCchHHHHHHHHHHHCCCcEEEEeCCHHHHHHHHHHHHhcCCCCceEEEecccCCCHHHHHHHHHHHH
Confidence 345788999999999999998888888899999999987765443322 2321 12 2222 1112222222222
Q ss_pred C--CCccEEEeCCCh
Q 019332 220 P--EGIDIYFENVGG 232 (342)
Q Consensus 220 ~--~~~d~vid~~g~ 232 (342)
. +.+|.++.++|.
T Consensus 88 ~~~~~id~vi~~Ag~ 102 (247)
T PRK08945 88 EQFGRLDGVLHNAGL 102 (247)
T ss_pred HHhCCCCEEEECCcc
Confidence 1 258999988763
|
|
| >PF13561 adh_short_C2: Enoyl-(Acyl carrier protein) reductase; PDB: 2UV8_B 3HMJ_A 2VKZ_C 1O5I_A 2P91_C 2OP0_A 2OL4_B 1NHW_A 1NNU_B 2O2Y_B | Back alignment and domain information |
|---|
Probab=96.73 E-value=0.056 Score=45.99 Aligned_cols=96 Identities=23% Similarity=0.334 Sum_probs=64.5
Q ss_pred cCC--cHHHHHHHHHHHHcCCEEEEEeCChhh----HHHHHHHcCCCeeE--ecCCchh---HHHHHHHHCCCCccEEEe
Q 019332 160 AAS--GAVGQLVGQFAKLLGCYVVGSAGSKDK----IDLLKNKFGFDEAF--NYKEEPD---LNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 160 ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~~----~~~~~~~~g~~~v~--~~~~~~~---~~~~i~~~~~~~~d~vid 228 (342)
|++ +++|.+.++-+...|++|+++.++.++ .+.+.++.+.. ++ |..+..+ +.+.+.+..+|.+|++++
T Consensus 1 g~~~s~GiG~aia~~l~~~Ga~V~~~~~~~~~~~~~~~~l~~~~~~~-~~~~D~~~~~~v~~~~~~~~~~~~g~iD~lV~ 79 (241)
T PF13561_consen 1 GAGSSSGIGRAIARALAEEGANVILTDRNEEKLADALEELAKEYGAE-VIQCDLSDEESVEALFDEAVERFGGRIDILVN 79 (241)
T ss_dssp STSSTSHHHHHHHHHHHHTTEEEEEEESSHHHHHHHHHHHHHHTTSE-EEESCTTSHHHHHHHHHHHHHHHCSSESEEEE
T ss_pred CCCCCCChHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHHHcCCc-eEeecCcchHHHHHHHHHHHhhcCCCeEEEEe
Confidence 445 899999999999999999999999987 34444355653 33 3433312 333344444367999988
Q ss_pred CCCh-h-----------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 229 NVGG-K-----------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 229 ~~g~-~-----------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+.|. . ....+.+.++++|.++.++....
T Consensus 80 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gsii~iss~~~ 137 (241)
T PF13561_consen 80 NAGISPPSNVEKPLLDLSEEDWDKTFDINVFSPFLLAQAALPLMKKGGSIINISSIAA 137 (241)
T ss_dssp EEESCTGGGTSSSGGGSHHHHHHHHHHHHTHHHHHHHHHHHHHHHHEEEEEEEEEGGG
T ss_pred cccccccccCCCChHhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCCcccccchhh
Confidence 7653 1 12345567888999998877544
|
... |
| >PRK07023 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.72 E-value=0.026 Score=48.10 Aligned_cols=76 Identities=16% Similarity=0.168 Sum_probs=48.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHH----H-CC-CCccE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKR----Y-FP-EGIDI 225 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~----~-~~-~~~d~ 225 (342)
++||+|++|++|..+++.+...|++|++++++.++ +... ..+.. ...|..+..++...+.+ . .. +..|+
T Consensus 3 ~vlItGasggiG~~ia~~l~~~G~~v~~~~r~~~~-~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (243)
T PRK07023 3 RAIVTGHSRGLGAALAEQLLQPGIAVLGVARSRHP-SLAA-AAGERLAEVELDLSDAAAAAAWLAGDLLAAFVDGASRVL 80 (243)
T ss_pred eEEEecCCcchHHHHHHHHHhCCCEEEEEecCcch-hhhh-ccCCeEEEEEeccCCHHHHHHHHHHHHHHHhccCCCceE
Confidence 69999999999999998888889999999987654 2222 33431 12344443123332222 1 22 25788
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++.+.|.
T Consensus 81 ~v~~ag~ 87 (243)
T PRK07023 81 LINNAGT 87 (243)
T ss_pred EEEcCcc
Confidence 8888773
|
|
| >TIGR01829 AcAcCoA_reduct acetoacetyl-CoA reductase | Back alignment and domain information |
|---|
Probab=96.70 E-value=0.0098 Score=50.50 Aligned_cols=79 Identities=18% Similarity=0.249 Sum_probs=49.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.++||+|++|++|...++.+...|++|+++.+ ++++.+...++. +.. ...|..+...+.+.+.+.. .+.+|
T Consensus 1 k~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 80 (242)
T TIGR01829 1 RIALVTGGMGGIGTAICQRLAKDGYRVAANCGPNEERAEAWLQEQGALGFDFRVVEGDVSSFESCKAAVAKVEAELGPID 80 (242)
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCc
Confidence 36899999999999999999889999998887 444333222122 211 1234444312333333221 13689
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
.+|.+.|.
T Consensus 81 ~vi~~ag~ 88 (242)
T TIGR01829 81 VLVNNAGI 88 (242)
T ss_pred EEEECCCC
Confidence 99999973
|
(R)-3-hydroxyacyl-CoA + NADP+ = 3-oxoacyl-CoA + NADPH. Members of this family may act in the biosynthesis of poly-beta-hydroxybutyrate (e.g. Rhizobium meliloti) and related poly-beta-hydroxyalkanoates. Note that the member of this family from Azospirillum brasilense, designated NodG, appears to lack acetoacetyl-CoA reductase activity and to act instead in the production of nodulation factor. This family is downgraded to subfamily for this NodG. Other proteins designated NodG, as from Rhizobium, belong to related but distinct protein families. |
| >PRK06523 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.0085 Score=51.63 Aligned_cols=75 Identities=20% Similarity=0.258 Sum_probs=49.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHH---HHHHHHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLN---EALKRYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~---~~i~~~~~~~~d~vi 227 (342)
++.++||+|++|++|...++.+...|++|++++++..+. .. -... ...|..+..... +.+.+.. +.+|+++
T Consensus 8 ~~k~vlItGas~gIG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~id~vi 82 (260)
T PRK06523 8 AGKRALVTGGTKGIGAATVARLLEAGARVVTTARSRPDD--LP--EGVEFVAADLTTAEGCAAVARAVLERL-GGVDILV 82 (260)
T ss_pred CCCEEEEECCCCchhHHHHHHHHHCCCEEEEEeCChhhh--cC--CceeEEecCCCCHHHHHHHHHHHHHHc-CCCCEEE
Confidence 468999999999999999998888899999999876431 11 1111 123444431222 2232222 3699999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
+++|
T Consensus 83 ~~ag 86 (260)
T PRK06523 83 HVLG 86 (260)
T ss_pred ECCc
Confidence 9987
|
|
| >PRK13940 glutamyl-tRNA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.66 E-value=0.017 Score=53.28 Aligned_cols=97 Identities=15% Similarity=0.110 Sum_probs=62.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-.+.+|||.|+ |++|.+++..+...|+ +++++.|+.++.+.+.++++...++.+. ++.+.+. .+|+||+|
T Consensus 179 l~~kkvlviGa-G~~a~~va~~L~~~g~~~I~V~nRt~~ra~~La~~~~~~~~~~~~---~l~~~l~-----~aDiVI~a 249 (414)
T PRK13940 179 ISSKNVLIIGA-GQTGELLFRHVTALAPKQIMLANRTIEKAQKITSAFRNASAHYLS---ELPQLIK-----KADIIIAA 249 (414)
T ss_pred ccCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHhcCCeEecHH---HHHHHhc-----cCCEEEEC
Confidence 35678999997 9999999999988997 8999999988877666466522333221 2222222 38999999
Q ss_pred CChhhHHHHHHhhhhCC-EEEEEceecc
Q 019332 230 VGGKMLDAVLLNMKIHG-RIAVCGMISQ 256 (342)
Q Consensus 230 ~g~~~~~~~~~~l~~~G-~~v~~g~~~~ 256 (342)
.+++..--..+.++... .+++++.+.+
T Consensus 250 T~a~~~vi~~~~~~~~~~~~iDLavPRd 277 (414)
T PRK13940 250 VNVLEYIVTCKYVGDKPRVFIDISIPQA 277 (414)
T ss_pred cCCCCeeECHHHhCCCCeEEEEeCCCCC
Confidence 99843211112222222 3566666543
|
|
| >PRK07102 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.013 Score=49.84 Aligned_cols=78 Identities=13% Similarity=0.165 Sum_probs=50.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-ee--EecCCchhHHHHHHHHCCCCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-EA--FNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
.+++|+||+|++|...++.+...|++|+++++++++.+.+.+++ +.. .+ .|..+..++.+.+.+.. ..+|++
T Consensus 2 ~~vlItGas~giG~~~a~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~-~~~d~v 80 (243)
T PRK07102 2 KKILIIGATSDIARACARRYAAAGARLYLAARDVERLERLADDLRARGAVAVSTHELDILDTASHAAFLDSLP-ALPDIV 80 (243)
T ss_pred cEEEEEcCCcHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEecCCCChHHHHHHHHHHh-hcCCEE
Confidence 47999999999999999988888999999999887665433222 111 11 23333312333333321 247999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+.+.|.
T Consensus 81 v~~ag~ 86 (243)
T PRK07102 81 LIAVGT 86 (243)
T ss_pred EECCcC
Confidence 987763
|
|
| >TIGR01035 hemA glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.023 Score=52.65 Aligned_cols=137 Identities=19% Similarity=0.228 Sum_probs=83.2
Q ss_pred CCCcccccEEEEEecCCCCCCCCCCEEE-e--------------c-----cccceeEeecCCcceeecCCCCCccchhhc
Q 019332 73 PGMPISGYGVAKVLDSENPEFKKGDLVW-G--------------M-----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGI 132 (342)
Q Consensus 73 ~G~e~~G~g~v~~vG~~v~~~~vGd~V~-~--------------~-----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~ 132 (342)
-|.|+.+ -+.+|++++.+.-+|+--. | + +.|++++.++. .+..- .. ++
T Consensus 90 ~~~~a~~--hl~~Va~GldS~V~GE~qI~gQvk~a~~~a~~~~~~g~~l~~lf~~a~~~~k-~vr~~--t~--i~----- 157 (417)
T TIGR01035 90 TGESAVE--HLFRVASGLDSMVVGETQILGQVKNAYKVAQEEKTVGKVLERLFQKAFSVGK-RVRTE--TD--IS----- 157 (417)
T ss_pred CchHHHH--HHHHHHhhhhhhhcCChHHHHHHHHHHHHHHHcCCchHHHHHHHHHHHHHhh-hhhhh--cC--CC-----
Confidence 4666554 6667777777655555332 0 0 35777776665 33321 11 11
Q ss_pred cCCchhhHHHhhh---hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 133 LGMPGMTAYAGFY---EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 133 l~~~~~ta~~al~---~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
..+.+.++.++. +.....++.+|+|.|+ |.+|..+++.++..|+ +|+++.++.++.+.+.+++|.. .+++.
T Consensus 158 -~~~vSv~~~Av~la~~~~~~l~~~~VlViGa-G~iG~~~a~~L~~~G~~~V~v~~rs~~ra~~la~~~g~~-~i~~~-- 232 (417)
T TIGR01035 158 -AGAVSISSAAVELAERIFGSLKGKKALLIGA-GEMGELVAKHLLRKGVGKILIANRTYERAEDLAKELGGE-AVKFE-- 232 (417)
T ss_pred -CCCcCHHHHHHHHHHHHhCCccCCEEEEECC-hHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHcCCe-EeeHH--
Confidence 112233333321 2223467789999997 9999999999999995 8999999988765443377753 33321
Q ss_pred hhHHHHHHHHCCCCccEEEeCCCh
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
++.+.+. ++|+||+|.+.
T Consensus 233 -~l~~~l~-----~aDvVi~aT~s 250 (417)
T TIGR01035 233 -DLEEYLA-----EADIVISSTGA 250 (417)
T ss_pred -HHHHHHh-----hCCEEEECCCC
Confidence 3333332 48999999987
|
This enzyme, together with glutamate-1-semialdehyde-2,1-aminomutase (TIGR00713), leads to the production of delta-amino-levulinic acid from Glu-tRNA. |
| >PLN02476 O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.65 E-value=0.027 Score=48.72 Aligned_cols=104 Identities=16% Similarity=0.132 Sum_probs=71.6
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC-
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF- 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~- 219 (342)
...+..+..+||=.| +++|+.++.+|+.++ .+|+.+..+++..+.+++ +.|....+..... +..+.+.++.
T Consensus 112 ~L~~~~~ak~VLEIG--T~tGySal~lA~al~~~G~V~TiE~d~e~~~~Ar~n~~~aGl~~~I~li~G-dA~e~L~~l~~ 188 (278)
T PLN02476 112 MLVQILGAERCIEVG--VYTGYSSLAVALVLPESGCLVACERDSNSLEVAKRYYELAGVSHKVNVKHG-LAAESLKSMIQ 188 (278)
T ss_pred HHHHhcCCCeEEEec--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHh
Confidence 446677788999998 688999999998774 489999999987777753 3466433333333 4455554432
Q ss_pred ---CCCccEEEe-CCCh---hhHHHHHHhhhhCCEEEEEc
Q 019332 220 ---PEGIDIYFE-NVGG---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 ---~~~~d~vid-~~g~---~~~~~~~~~l~~~G~~v~~g 252 (342)
.+.||.||- +.-. ..++.+++.|+++|.++.=.
T Consensus 189 ~~~~~~FD~VFIDa~K~~Y~~y~e~~l~lL~~GGvIV~DN 228 (278)
T PLN02476 189 NGEGSSYDFAFVDADKRMYQDYFELLLQLVRVGGVIVMDN 228 (278)
T ss_pred cccCCCCCEEEECCCHHHHHHHHHHHHHhcCCCcEEEEec
Confidence 236998754 4332 36788899999999987543
|
|
| >PRK07775 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.018 Score=50.19 Aligned_cols=80 Identities=15% Similarity=0.144 Sum_probs=51.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHC--CCCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
..+++|+||+|++|.++++.+...|++|++++++.++.+.+.+ ..+.. .. .|..+...+.+.+.+.. .+++|
T Consensus 10 ~~~vlVtGa~g~iG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 89 (274)
T PRK07775 10 RRPALVAGASSGIGAATAIELAAAGFPVALGARRVEKCEELVDKIRADGGEAVAFPLDVTDPDSVKSFVAQAEEALGEIE 89 (274)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHhcCCCC
Confidence 3589999999999999998888889999999987765543321 22332 11 24444312333333221 13689
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
.++.++|.
T Consensus 90 ~vi~~Ag~ 97 (274)
T PRK07775 90 VLVSGAGD 97 (274)
T ss_pred EEEECCCc
Confidence 99998874
|
|
| >PRK09135 pteridine reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.64 E-value=0.013 Score=50.05 Aligned_cols=80 Identities=13% Similarity=0.131 Sum_probs=49.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHHHc---CC--C--eeEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKNKF---GF--D--EAFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~~~---g~--~--~v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+|++|++|..+++.+...|++|++++++. ++.+.+.+.+ +. . ...|..+...+...+++.. .+
T Consensus 5 ~~~~vlItGa~g~iG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 84 (249)
T PRK09135 5 SAKVALITGGARRIGAAIARTLHAAGYRVAIHYHRSAAEADALAAELNALRPGSAAALQADLLDPDALPELVAACVAAFG 84 (249)
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhhcCCceEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 457899999999999998888888899999999753 3333322121 11 1 1234444312222222221 13
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
.+|++|.++|
T Consensus 85 ~~d~vi~~ag 94 (249)
T PRK09135 85 RLDALVNNAS 94 (249)
T ss_pred CCCEEEECCC
Confidence 5899999998
|
|
| >PRK05855 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.0088 Score=57.95 Aligned_cols=81 Identities=16% Similarity=0.114 Sum_probs=54.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+. .|.. . ..|..+.....+.+.+.. .+.+
T Consensus 314 ~~~~~lv~G~s~giG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 393 (582)
T PRK05855 314 SGKLVVVTGAGSGIGRETALAFAREGAEVVASDIDEAAAERTAELIRAAGAVAHAYRVDVSDADAMEAFAEWVRAEHGVP 393 (582)
T ss_pred CCCEEEEECCcCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 457899999999999998888888999999999988776554322 2331 1 234444422333333222 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 394 d~lv~~Ag~ 402 (582)
T PRK05855 394 DIVVNNAGI 402 (582)
T ss_pred cEEEECCcc
Confidence 999999984
|
|
| >PLN00015 protochlorophyllide reductase | Back alignment and domain information |
|---|
Probab=96.62 E-value=0.012 Score=52.29 Aligned_cols=76 Identities=16% Similarity=0.168 Sum_probs=50.6
Q ss_pred EEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCC--Ce----eEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 157 FISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGF--DE----AFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~--~~----v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
||+|+++++|.+.++.+...| ++|+.+++++++.+.+.++++. .. .+|..+...+.+.+.+.. .+.+|+++
T Consensus 1 lITGas~GIG~aia~~l~~~G~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~iD~lI 80 (308)
T PLN00015 1 IITGASSGLGLATAKALAETGKWHVVMACRDFLKAERAAKSAGMPKDSYTVMHLDLASLDSVRQFVDNFRRSGRPLDVLV 80 (308)
T ss_pred CEeCCCChHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhcCCCCeEEEEEecCCCHHHHHHHHHHHHhcCCCCCEEE
Confidence 589999999999888888889 8999999988776655435432 11 235544412332333222 23699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
+++|.
T Consensus 81 nnAG~ 85 (308)
T PLN00015 81 CNAAV 85 (308)
T ss_pred ECCCc
Confidence 98873
|
|
| >KOG1610 consensus Corticosteroid 11-beta-dehydrogenase and related short chain-type dehydrogenases [Secondary metabolites biosynthesis, transport and catabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.088 Score=45.75 Aligned_cols=108 Identities=15% Similarity=0.190 Sum_probs=73.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----CeeEecCCch---hHHHHHHHHCCC-C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----DEAFNYKEEP---DLNEALKRYFPE-G 222 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~~v~~~~~~~---~~~~~i~~~~~~-~ 222 (342)
..+..|+|+|..+|.|..++.-+...|.+|++.+..++..+.++.+..- +-.+|-.+++ ...+.+++..+. +
T Consensus 27 ~~~k~VlITGCDSGfG~~LA~~L~~~Gf~V~Agcl~~~gae~L~~~~~s~rl~t~~LDVT~~esi~~a~~~V~~~l~~~g 106 (322)
T KOG1610|consen 27 LSDKAVLITGCDSGFGRLLAKKLDKKGFRVFAGCLTEEGAESLRGETKSPRLRTLQLDVTKPESVKEAAQWVKKHLGEDG 106 (322)
T ss_pred cCCcEEEEecCCcHHHHHHHHHHHhcCCEEEEEeecCchHHHHhhhhcCCcceeEeeccCCHHHHHHHHHHHHHhccccc
Confidence 4566799999999999999999999999999999888776666633311 1134444431 244455666665 7
Q ss_pred ccEEEeCCChh---------------------------hHHHHHHhhhh-CCEEEEEceecccc
Q 019332 223 IDIYFENVGGK---------------------------MLDAVLLNMKI-HGRIAVCGMISQYN 258 (342)
Q Consensus 223 ~d~vid~~g~~---------------------------~~~~~~~~l~~-~G~~v~~g~~~~~~ 258 (342)
.--++|++|-. .....+..+++ .||+|.+++..+..
T Consensus 107 LwglVNNAGi~~~~g~~ewl~~~d~~~~l~vNllG~irvT~~~lpLlr~arGRvVnvsS~~GR~ 170 (322)
T KOG1610|consen 107 LWGLVNNAGISGFLGPDEWLTVEDYRKVLNVNLLGTIRVTKAFLPLLRRARGRVVNVSSVLGRV 170 (322)
T ss_pred ceeEEeccccccccCccccccHHHHHHHHhhhhhhHHHHHHHHHHHHHhccCeEEEecccccCc
Confidence 77788888711 11233445555 69999999877753
|
|
| >TIGR02632 RhaD_aldol-ADH rhamnulose-1-phosphate aldolase/alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=96.61 E-value=0.0092 Score=58.86 Aligned_cols=81 Identities=17% Similarity=0.277 Sum_probs=54.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCCe----eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFDE----AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~~----v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+|++|++|.+.++.+...|++|++++++.++.+.+.+++ +... ..|..+...+.+.+.+.. .+
T Consensus 413 ~gkvvLVTGasggIG~aiA~~La~~Ga~Vvi~~r~~~~~~~~~~~l~~~~~~~~~~~v~~Dvtd~~~v~~a~~~i~~~~g 492 (676)
T TIGR02632 413 ARRVAFVTGGAGGIGRETARRLAAEGAHVVLADLNLEAAEAVAAEINGQFGAGRAVALKMDVTDEQAVKAAFADVALAYG 492 (676)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHHHHhhcCCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 4689999999999999999988888999999999887665443232 3211 234443313333333322 23
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|++++++|.
T Consensus 493 ~iDilV~nAG~ 503 (676)
T TIGR02632 493 GVDIVVNNAGI 503 (676)
T ss_pred CCcEEEECCCC
Confidence 69999999984
|
|
| >COG0686 Ald Alanine dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.019 Score=49.58 Aligned_cols=99 Identities=22% Similarity=0.251 Sum_probs=72.1
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
+.++ +|.|+|+ |.+|.-++.+|.-+|++|+..+.|.+|+..+...|+-+ .++ ++...++.+.+.+ .|++|.
T Consensus 166 V~~~-kv~iiGG-GvvgtnaAkiA~glgA~Vtild~n~~rl~~ldd~f~~rv~~~-~st~~~iee~v~~-----aDlvIg 237 (371)
T COG0686 166 VLPA-KVVVLGG-GVVGTNAAKIAIGLGADVTILDLNIDRLRQLDDLFGGRVHTL-YSTPSNIEEAVKK-----ADLVIG 237 (371)
T ss_pred CCCc-cEEEECC-ccccchHHHHHhccCCeeEEEecCHHHHhhhhHhhCceeEEE-EcCHHHHHHHhhh-----ccEEEE
Confidence 3454 5777786 99999999999999999999999999999988556654 333 3332255555543 788887
Q ss_pred CCC---hh----hHHHHHHhhhhCCEEEEEceecc
Q 019332 229 NVG---GK----MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 229 ~~g---~~----~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++= .. ..++..+.|+|++.++++..-.+
T Consensus 238 aVLIpgakaPkLvt~e~vk~MkpGsVivDVAiDqG 272 (371)
T COG0686 238 AVLIPGAKAPKLVTREMVKQMKPGSVIVDVAIDQG 272 (371)
T ss_pred EEEecCCCCceehhHHHHHhcCCCcEEEEEEEcCC
Confidence 542 11 45677899999999998875433
|
|
| >TIGR01963 PHB_DH 3-hydroxybutyrate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.011 Score=50.70 Aligned_cols=78 Identities=18% Similarity=0.238 Sum_probs=52.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHH---HHHHHCCCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNE---ALKRYFPEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~---~i~~~~~~~~d 224 (342)
.++||+|++|++|...+..+...|++|++++++.++.+.+...+ +.. ...|..+..++.+ .+.+.. +++|
T Consensus 2 ~~vlItGa~g~lG~~l~~~l~~~g~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-~~~d 80 (255)
T TIGR01963 2 KTALVTGAASGIGLAIALALAAAGANVVVNDLGEAGAEAAAKVATDAGGSVIYLVADVTKEDEIADMIAAAAAEF-GGLD 80 (255)
T ss_pred CEEEEcCCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhc-CCCC
Confidence 57999999999999999888888999999999887665554222 221 1134444322322 233222 3589
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++|.+.|.
T Consensus 81 ~vi~~a~~ 88 (255)
T TIGR01963 81 ILVNNAGI 88 (255)
T ss_pred EEEECCCC
Confidence 99988863
|
This model represents a subfamily of the short chain dehydrogenases. Characterized members so far as 3-hydroxybutyrate dehydrogenases and are found in species that accumulate ester polmers called polyhydroxyalkanoic acids (PHAs) under certain conditions. Several members of the family are from species not known to accumulate PHAs, including Oceanobacillus iheyensis and Bacillus subtilis. However, polymer formation is not required for there be a role for 3-hydroxybutyrate dehydrogenase; it may be members of this family have the same function in those species. |
| >PRK08264 short chain dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.60 E-value=0.01 Score=50.29 Aligned_cols=75 Identities=16% Similarity=0.259 Sum_probs=50.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
.+.+++|+||+|++|..+++.+...|+ +|+++.++.++.+. .+.. . ..|..+...+.+.+.+ . +.+|++|
T Consensus 5 ~~~~vlItGgsg~iG~~la~~l~~~G~~~V~~~~r~~~~~~~----~~~~~~~~~~D~~~~~~~~~~~~~-~-~~id~vi 78 (238)
T PRK08264 5 KGKVVLVTGANRGIGRAFVEQLLARGAAKVYAAARDPESVTD----LGPRVVPLQLDVTDPASVAAAAEA-A-SDVTILV 78 (238)
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCcccEEEEecChhhhhh----cCCceEEEEecCCCHHHHHHHHHh-c-CCCCEEE
Confidence 457899999999999999999888999 99999988765432 2221 1 2344443122222222 1 2589999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
.++|.
T Consensus 79 ~~ag~ 83 (238)
T PRK08264 79 NNAGI 83 (238)
T ss_pred ECCCc
Confidence 98886
|
|
| >PF03435 Saccharop_dh: Saccharopine dehydrogenase ; InterPro: IPR005097 This entry represents saccharopine dehydrogenase and homospermidine synthase | Back alignment and domain information |
|---|
Probab=96.59 E-value=0.025 Score=51.91 Aligned_cols=91 Identities=16% Similarity=0.213 Sum_probs=59.0
Q ss_pred EEEecCCcHHHHHHHHHHHHcC-C-EEEEEeCChhhHHHHHHHc-CC--C-eeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 156 VFISAASGAVGQLVGQFAKLLG-C-YVVGSAGSKDKIDLLKNKF-GF--D-EAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~g-a-~Vi~~~~s~~~~~~~~~~~-g~--~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
|+|+|+ |.+|..+++.+...+ . +|++.+++.++.+.+.+++ +. . ..+|..+. +.+.++.. +.|+|++|
T Consensus 1 IlvlG~-G~vG~~~~~~L~~~~~~~~v~va~r~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~-~~dvVin~ 74 (386)
T PF03435_consen 1 ILVLGA-GRVGSAIARLLARRGPFEEVTVADRNPEKAERLAEKLLGDRVEAVQVDVNDP----ESLAELLR-GCDVVINC 74 (386)
T ss_dssp EEEE---SHHHHHHHHHHHCTTCE-EEEEEESSHHHHHHHHT--TTTTEEEEE--TTTH----HHHHHHHT-TSSEEEE-
T ss_pred CEEEcC-cHHHHHHHHHHhcCCCCCcEEEEECCHHHHHHHHhhccccceeEEEEecCCH----HHHHHHHh-cCCEEEEC
Confidence 789999 999999999887665 4 8999999999987776332 22 1 23444432 22555433 37999999
Q ss_pred CChh-hHHHHHHhhhhCCEEEEEc
Q 019332 230 VGGK-MLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 230 ~g~~-~~~~~~~~l~~~G~~v~~g 252 (342)
+|.. ....+..|++.+-++++.+
T Consensus 75 ~gp~~~~~v~~~~i~~g~~yvD~~ 98 (386)
T PF03435_consen 75 AGPFFGEPVARACIEAGVHYVDTS 98 (386)
T ss_dssp SSGGGHHHHHHHHHHHT-EEEESS
T ss_pred CccchhHHHHHHHHHhCCCeeccc
Confidence 9984 4445556778888998843
|
Saccharopine reductase (SR) 1.5.1.10 from EC) catalyses the condensation of l-alpha-aminoadipate-delta-semialdehyde (AASA) with l-glutamate to give an imine, which is reduced by NADPH to give saccharopine []. In some organisms this enzyme is found as a bifunctional polypeptide with lysine ketoglutarate reductase (PF). Saccharopine dehydrogenase can also function as a saccharopine reductase. Homospermidine synthase proteins (2.5.1.44 from EC). Homospermidine synthase (HSS) catalyses the synthesis of the polyamine homospermidine from 2 mol putrescine in an NAD+-dependent reaction [].; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2AXQ_A 1E5Q_A 1FF9_A 1E5L_A 2PH5_A 3IC5_A 3ABI_A. |
| >PLN02781 Probable caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.57 E-value=0.033 Score=47.28 Aligned_cols=104 Identities=17% Similarity=0.147 Sum_probs=70.2
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC-
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF- 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~- 219 (342)
...+..+..+||-.| ++.|..++.+++..+ .+|+++..+++..+.+++ +.|....+..... +..+.+.++.
T Consensus 62 ~l~~~~~~~~vLEiG--t~~G~s~l~la~~~~~~g~v~tiD~d~~~~~~A~~n~~~~gl~~~i~~~~g-da~~~L~~l~~ 138 (234)
T PLN02781 62 MLVKIMNAKNTLEIG--VFTGYSLLTTALALPEDGRITAIDIDKEAYEVGLEFIKKAGVDHKINFIQS-DALSALDQLLN 138 (234)
T ss_pred HHHHHhCCCEEEEec--CcccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-cHHHHHHHHHh
Confidence 346677788999998 677888888888763 499999999987777763 3354322333333 4445555442
Q ss_pred ---CCCccEEEeCCC-h---hhHHHHHHhhhhCCEEEEEc
Q 019332 220 ---PEGIDIYFENVG-G---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 ---~~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~g 252 (342)
.+.||+||--.. . ..++.+.+++++||.++.-.
T Consensus 139 ~~~~~~fD~VfiDa~k~~y~~~~~~~~~ll~~GG~ii~dn 178 (234)
T PLN02781 139 NDPKPEFDFAFVDADKPNYVHFHEQLLKLVKVGGIIAFDN 178 (234)
T ss_pred CCCCCCCCEEEECCCHHHHHHHHHHHHHhcCCCeEEEEEc
Confidence 236999874432 1 46778899999999887643
|
|
| >PRK09134 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.021 Score=49.21 Aligned_cols=81 Identities=14% Similarity=0.173 Sum_probs=50.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|..+++.+...|++|+++.+. .++.+.+.+++ +.. . ..|..+...+.+.+.+.. .+.
T Consensus 8 ~~k~vlItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~~~~~~~ 87 (258)
T PRK09134 8 APRAALVTGAARRIGRAIALDLAAHGFDVAVHYNRSRDEAEALAAEIRALGRRAVALQADLADEAEVRALVARASAALGP 87 (258)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999998888899999887654 33333332122 331 1 234444312332232221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++.++|.
T Consensus 88 iD~vi~~ag~ 97 (258)
T PRK09134 88 ITLLVNNASL 97 (258)
T ss_pred CCEEEECCcC
Confidence 9999999873
|
|
| >COG2910 Putative NADH-flavin reductase [General function prediction only] | Back alignment and domain information |
|---|
Probab=96.56 E-value=0.027 Score=44.90 Aligned_cols=92 Identities=23% Similarity=0.283 Sum_probs=61.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--CeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--DEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|.|+||+|-+|...++=|...|.+|++++|+++|....+ ..-+ ..+++.. .+++.+ .|+|+||++.|.
T Consensus 2 KIaiIgAsG~~Gs~i~~EA~~RGHeVTAivRn~~K~~~~~-~~~i~q~Difd~~---~~a~~l-----~g~DaVIsA~~~ 72 (211)
T COG2910 2 KIAIIGASGKAGSRILKEALKRGHEVTAIVRNASKLAARQ-GVTILQKDIFDLT---SLASDL-----AGHDAVISAFGA 72 (211)
T ss_pred eEEEEecCchhHHHHHHHHHhCCCeeEEEEeChHhccccc-cceeecccccChh---hhHhhh-----cCCceEEEeccC
Confidence 5889999999999999999999999999999999875432 1111 1222211 111122 269999998885
Q ss_pred h----------hHHHHHHhhhhCC--EEEEEceec
Q 019332 233 K----------MLDAVLLNMKIHG--RIAVCGMIS 255 (342)
Q Consensus 233 ~----------~~~~~~~~l~~~G--~~v~~g~~~ 255 (342)
. ..+.++..|+.-| |++.+|..+
T Consensus 73 ~~~~~~~~~~k~~~~li~~l~~agv~RllVVGGAG 107 (211)
T COG2910 73 GASDNDELHSKSIEALIEALKGAGVPRLLVVGGAG 107 (211)
T ss_pred CCCChhHHHHHHHHHHHHHHhhcCCeeEEEEcCcc
Confidence 3 1233556666633 788887644
|
|
| >PLN00016 RNA-binding protein; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.026 Score=51.71 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=62.6
Q ss_pred CCCEEEEe----cCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHH-----------HHHHcCCCeeEecCCchhHHHHHH
Q 019332 152 QGECVFIS----AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL-----------LKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 152 ~~~~vlI~----ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~-----------~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
...+|||+ ||+|-+|..++..+...|.+|++++++..+... +. ..+... +.. |+.+ +.
T Consensus 51 ~~~~VLVt~~~~GatG~iG~~lv~~L~~~G~~V~~l~R~~~~~~~~~~~~~~~~~~l~-~~~v~~-v~~----D~~d-~~ 123 (378)
T PLN00016 51 EKKKVLIVNTNSGGHAFIGFYLAKELVKAGHEVTLFTRGKEPSQKMKKEPFSRFSELS-SAGVKT-VWG----DPAD-VK 123 (378)
T ss_pred ccceEEEEeccCCCceeEhHHHHHHHHHCCCEEEEEecCCcchhhhccCchhhhhHhh-hcCceE-EEe----cHHH-HH
Confidence 34689999 999999999999888889999999988654221 11 223322 211 2222 33
Q ss_pred HHCCC-CccEEEeCCCh--hhHHHHHHhhhhCC--EEEEEcee
Q 019332 217 RYFPE-GIDIYFENVGG--KMLDAVLLNMKIHG--RIAVCGMI 254 (342)
Q Consensus 217 ~~~~~-~~d~vid~~g~--~~~~~~~~~l~~~G--~~v~~g~~ 254 (342)
+.... ++|+|+++.+. .....+++.++..| ++|.+++.
T Consensus 124 ~~~~~~~~d~Vi~~~~~~~~~~~~ll~aa~~~gvkr~V~~SS~ 166 (378)
T PLN00016 124 SKVAGAGFDVVYDNNGKDLDEVEPVADWAKSPGLKQFLFCSSA 166 (378)
T ss_pred hhhccCCccEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 33333 79999999875 23455666665443 78877754
|
|
| >COG2519 GCD14 tRNA(1-methyladenosine) methyltransferase and related methyltransferases [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.03 Score=47.09 Aligned_cols=103 Identities=19% Similarity=0.246 Sum_probs=73.2
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
...++.+|++|+=.| .|.|.+++-||+..|- +|+.....++..+.+++. +|....+..... |..+.+-.
T Consensus 88 ~~~gi~pg~rVlEAG--tGSG~lt~~La~~vg~~G~v~tyE~r~d~~k~A~~Nl~~~~l~d~v~~~~~-Dv~~~~~~--- 161 (256)
T COG2519 88 ARLGISPGSRVLEAG--TGSGALTAYLARAVGPEGHVTTYEIREDFAKTARENLSEFGLGDRVTLKLG-DVREGIDE--- 161 (256)
T ss_pred HHcCCCCCCEEEEcc--cCchHHHHHHHHhhCCCceEEEEEecHHHHHHHHHHHHHhccccceEEEec-cccccccc---
Confidence 347899999998877 5778889999987775 999999988887777653 344332333322 33222211
Q ss_pred CCccEE-EeCCCh-hhHHHHHHhhhhCCEEEEEcee
Q 019332 221 EGIDIY-FENVGG-KMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 221 ~~~d~v-id~~g~-~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
..+|.+ +|--.. ..++.+.+.|+++|.++++..+
T Consensus 162 ~~vDav~LDmp~PW~~le~~~~~Lkpgg~~~~y~P~ 197 (256)
T COG2519 162 EDVDAVFLDLPDPWNVLEHVSDALKPGGVVVVYSPT 197 (256)
T ss_pred cccCEEEEcCCChHHHHHHHHHHhCCCcEEEEEcCC
Confidence 168875 566555 7899999999999999998653
|
|
| >PRK08642 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.017 Score=49.50 Aligned_cols=79 Identities=16% Similarity=0.212 Sum_probs=49.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHcCCC-e--eEecCCchhHHHHH---HHHCCCCccE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKFGFD-E--AFNYKEEPDLNEAL---KRYFPEGIDI 225 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i---~~~~~~~~d~ 225 (342)
+.++||+||+|++|.+.+..+...|++|+.+.+ +.++.+.+..+++.. . ..|..+..++.+.+ .+..+..+|+
T Consensus 5 ~k~ilItGas~gIG~~la~~l~~~G~~vv~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~id~ 84 (253)
T PRK08642 5 EQTVLVTGGSRGLGAAIARAFAREGARVVVNYHQSEDAAEALADELGDRAIALQADVTDREQVQAMFATATEHFGKPITT 84 (253)
T ss_pred CCEEEEeCCCCcHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHhCCCCeE
Confidence 468999999999999999988888999987654 444444443244421 1 12444431233333 3333224999
Q ss_pred EEeCCC
Q 019332 226 YFENVG 231 (342)
Q Consensus 226 vid~~g 231 (342)
++.+.|
T Consensus 85 li~~ag 90 (253)
T PRK08642 85 VVNNAL 90 (253)
T ss_pred EEECCC
Confidence 999876
|
|
| >PRK07201 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.015 Score=57.38 Aligned_cols=80 Identities=20% Similarity=0.308 Sum_probs=54.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCcc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
+.+++|+||+|++|.+++..+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+.+|
T Consensus 371 ~k~vlItGas~giG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id 450 (657)
T PRK07201 371 GKVVLITGASSGIGRATAIKVAEAGATVFLVARNGEALDELVAEIRAKGGTAHAYTCDLTDSAAVDHTVKDILAEHGHVD 450 (657)
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 568999999999999999888888999999999887765543232 321 1 234444323333333322 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 451 ~li~~Ag~ 458 (657)
T PRK07201 451 YLVNNAGR 458 (657)
T ss_pred EEEECCCC
Confidence 99999983
|
|
| >COG2226 UbiE Methylase involved in ubiquinone/menaquinone biosynthesis [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.54 E-value=0.024 Score=47.79 Aligned_cols=102 Identities=24% Similarity=0.265 Sum_probs=71.5
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC---CeeEecCCchhHHHHHHHHCCCCc
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF---DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
....+|++||=.+ +|+|-.+..+++..|- +|++++.|++-++.++++..- .. +.+-.. + ++.+. .-++.+
T Consensus 47 ~~~~~g~~vLDva--~GTGd~a~~~~k~~g~g~v~~~D~s~~ML~~a~~k~~~~~~~~-i~fv~~-d-Ae~LP-f~D~sF 120 (238)
T COG2226 47 LGIKPGDKVLDVA--CGTGDMALLLAKSVGTGEVVGLDISESMLEVAREKLKKKGVQN-VEFVVG-D-AENLP-FPDNSF 120 (238)
T ss_pred hCCCCCCEEEEec--CCccHHHHHHHHhcCCceEEEEECCHHHHHHHHHHhhccCccc-eEEEEe-c-hhhCC-CCCCcc
Confidence 4456899999887 6889999999998876 999999999888777754332 11 222111 1 22222 222378
Q ss_pred cEEEeCCCh-------hhHHHHHHhhhhCCEEEEEceec
Q 019332 224 DIYFENVGG-------KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 224 d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|.+.-+.|- ..+.+..+.|+|+|+++++....
T Consensus 121 D~vt~~fglrnv~d~~~aL~E~~RVlKpgG~~~vle~~~ 159 (238)
T COG2226 121 DAVTISFGLRNVTDIDKALKEMYRVLKPGGRLLVLEFSK 159 (238)
T ss_pred CEEEeeehhhcCCCHHHHHHHHHHhhcCCeEEEEEEcCC
Confidence 998777662 46788999999999998887643
|
|
| >PRK06171 sorbitol-6-phosphate 2-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.0061 Score=52.75 Aligned_cols=77 Identities=16% Similarity=0.180 Sum_probs=50.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
.+.++||+|++|++|.+.++.+...|++|+.+++++++.+ ..... ...|..+..++.+.+.+.. .+.+|++++
T Consensus 8 ~~k~vlItG~s~gIG~~la~~l~~~G~~v~~~~~~~~~~~----~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~li~ 83 (266)
T PRK06171 8 QGKIIIVTGGSSGIGLAIVKELLANGANVVNADIHGGDGQ----HENYQFVPTDVSSAEEVNHTVAEIIEKFGRIDGLVN 83 (266)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCccccc----cCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 4578999999999999999999889999999987765432 11111 1234444323333333322 136899999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 84 ~Ag~ 87 (266)
T PRK06171 84 NAGI 87 (266)
T ss_pred CCcc
Confidence 8873
|
|
| >TIGR02415 23BDH acetoin reductases | Back alignment and domain information |
|---|
Probab=96.52 E-value=0.014 Score=49.98 Aligned_cols=78 Identities=12% Similarity=0.159 Sum_probs=51.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
+++|+|++|++|...++.+...|++|+.+.+++++.+.+.++ .+.. . ..|..+...+.+.+.+.. .+.+|++
T Consensus 2 ~~lItG~sg~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~~~id~v 81 (254)
T TIGR02415 2 VALVTGGAQGIGKGIAERLAKDGFAVAVADLNEETAKETAKEINQAGGKAVAYKLDVSDKDQVFSAIDQAAEKFGGFDVM 81 (254)
T ss_pred EEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 689999999999999988888999999999887655433322 2321 1 234444312333333322 1258999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+++.|.
T Consensus 82 i~~ag~ 87 (254)
T TIGR02415 82 VNNAGV 87 (254)
T ss_pred EECCCc
Confidence 998874
|
One member of this family, as characterized in Klebsiella terrigena, is described as able to interconvert acetoin + NADH with meso-2,3-butanediol + NAD(+). It is also called capable of irreversible reduction of diacetyl with NADH to acetoin. Blomqvist, et al. decline to specify either EC 1.1.1.4 which is (R,R)-butanediol dehydrogenase, or EC 1.1.1.5, which is acetoin dehydrogenase without a specified stereochemistry, for this enzyme. This enzyme is a homotetramer in the family of short chain dehydrogenases (pfam00106). Another member of this family, from Corynebacterium glutamicum, is called L-2,3-butanediol dehydrogenase (PubMed:11577733). |
| >PRK03369 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional | Back alignment and domain information |
|---|
Probab=96.51 E-value=0.014 Score=55.25 Aligned_cols=73 Identities=15% Similarity=0.152 Sum_probs=53.7
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.++++|+|+|. |..|++++++++..|++|++.+.++++.+.++ ++|+.. +... ...+.++ .+|+|+.
T Consensus 8 ~~~~~~~v~V~G~-G~sG~aa~~~L~~~G~~v~~~D~~~~~~~~l~-~~g~~~-~~~~---~~~~~l~-----~~D~VV~ 76 (488)
T PRK03369 8 PLLPGAPVLVAGA-GVTGRAVLAALTRFGARPTVCDDDPDALRPHA-ERGVAT-VSTS---DAVQQIA-----DYALVVT 76 (488)
T ss_pred cccCCCeEEEEcC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-hCCCEE-EcCc---chHhHhh-----cCCEEEE
Confidence 3567899999996 99999999999999999999987766666666 677632 3221 1122222 3799999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
+.|-
T Consensus 77 SpGi 80 (488)
T PRK03369 77 SPGF 80 (488)
T ss_pred CCCC
Confidence 8886
|
|
| >PRK00258 aroE shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.50 E-value=0.021 Score=49.92 Aligned_cols=95 Identities=17% Similarity=0.132 Sum_probs=61.3
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
..+.+++|+|+ |++|.+++..+...| .+|+++.|+.++.+.+.++++....+.. .. +..+.+ ..+|+|++|
T Consensus 121 ~~~k~vlVlGa-Gg~a~ai~~aL~~~g~~~V~v~~R~~~~a~~l~~~~~~~~~~~~-~~-~~~~~~-----~~~DivIna 192 (278)
T PRK00258 121 LKGKRILILGA-GGAARAVILPLLDLGVAEITIVNRTVERAEELAKLFGALGKAEL-DL-ELQEEL-----ADFDLIINA 192 (278)
T ss_pred CCCCEEEEEcC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhhhccceee-cc-cchhcc-----ccCCEEEEC
Confidence 35678999997 999999999999999 5999999999887766645542110111 10 111111 258999999
Q ss_pred CChhhH------HHHHHhhhhCCEEEEEce
Q 019332 230 VGGKML------DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~~~~------~~~~~~l~~~G~~v~~g~ 253 (342)
...... .....+++++..++.+-.
T Consensus 193 Tp~g~~~~~~~~~~~~~~l~~~~~v~DivY 222 (278)
T PRK00258 193 TSAGMSGELPLPPLPLSLLRPGTIVYDMIY 222 (278)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEeec
Confidence 875321 122356677766666543
|
|
| >PF02719 Polysacc_synt_2: Polysaccharide biosynthesis protein; InterPro: IPR003869 This domain is found in diverse bacterial polysaccharide biosynthesis proteins including the CapD protein from Staphylococcus aureus [], the WalL protein, mannosyl-transferase [], and several putative epimerases | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.031 Score=48.54 Aligned_cols=76 Identities=20% Similarity=0.220 Sum_probs=48.8
Q ss_pred EEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcC----CCee----Ee-cCCchhHHHHHHHHCCC-Ccc
Q 019332 156 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFG----FDEA----FN-YKEEPDLNEALKRYFPE-GID 224 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g----~~~v----~~-~~~~~~~~~~i~~~~~~-~~d 224 (342)
|||+||+|.+|...++.+..++. +++..++++.++-.+++++. ...+ .. .-+- .-.+.+.+.... ++|
T Consensus 1 VLVTGa~GSIGseL~rql~~~~p~~lil~d~~E~~l~~l~~~l~~~~~~~~v~~~~~~vigDv-rd~~~l~~~~~~~~pd 79 (293)
T PF02719_consen 1 VLVTGAGGSIGSELVRQLLRYGPKKLILFDRDENKLYELERELRSRFPDPKVRFEIVPVIGDV-RDKERLNRIFEEYKPD 79 (293)
T ss_dssp EEEETTTSHHHHHHHHHHHCCB-SEEEEEES-HHHHHHHHHHCHHHC--TTCEEEEE--CTSC-CHHHHHHHHTT--T-S
T ss_pred CEEEccccHHHHHHHHHHHhcCCCeEEEeCCChhHHHHHHHHHhhcccccCcccccCceeecc-cCHHHHHHHHhhcCCC
Confidence 79999999999998888887786 89999999998877776662 1111 00 1111 334566776665 899
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+||.++.-
T Consensus 80 iVfHaAA~ 87 (293)
T PF02719_consen 80 IVFHAAAL 87 (293)
T ss_dssp EEEE----
T ss_pred EEEEChhc
Confidence 99999884
|
The CapD protein is required for biosynthesis of type 1 capsular polysaccharide.; GO: 0009058 biosynthetic process; PDB: 3PVZ_C 2GN8_B 2GN4_A 2GNA_B 2GN6_A 2GN9_A. |
| >PRK00107 gidB 16S rRNA methyltransferase GidB; Reviewed | Back alignment and domain information |
|---|
Probab=96.48 E-value=0.032 Score=45.47 Aligned_cols=96 Identities=18% Similarity=0.153 Sum_probs=62.3
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCCCcc
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
.+.++.+||-.|. |.|..++.+++.. +++|++++.+++..+.+++ +.+.+. +..... +..+ +.. .+.+|
T Consensus 42 ~l~~g~~VLDiGc--GtG~~al~la~~~~~~~V~giD~s~~~l~~A~~~~~~~~l~~-i~~~~~-d~~~-~~~--~~~fD 114 (187)
T PRK00107 42 YLPGGERVLDVGS--GAGFPGIPLAIARPELKVTLVDSLGKKIAFLREVAAELGLKN-VTVVHG-RAEE-FGQ--EEKFD 114 (187)
T ss_pred hcCCCCeEEEEcC--CCCHHHHHHHHHCCCCeEEEEeCcHHHHHHHHHHHHHcCCCC-EEEEec-cHhh-CCC--CCCcc
Confidence 3556889999984 5567677777644 5699999999876666653 344433 222222 3222 211 23699
Q ss_pred EEEeCCCh---hhHHHHHHhhhhCCEEEEE
Q 019332 225 IYFENVGG---KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 225 ~vid~~g~---~~~~~~~~~l~~~G~~v~~ 251 (342)
+|+-.... ..+..+.++|+++|+++.+
T Consensus 115 lV~~~~~~~~~~~l~~~~~~LkpGG~lv~~ 144 (187)
T PRK00107 115 VVTSRAVASLSDLVELCLPLLKPGGRFLAL 144 (187)
T ss_pred EEEEccccCHHHHHHHHHHhcCCCeEEEEE
Confidence 98854322 4667888999999999876
|
|
| >PLN02589 caffeoyl-CoA O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.47 E-value=0.044 Score=46.69 Aligned_cols=102 Identities=13% Similarity=0.101 Sum_probs=71.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC-
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF- 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~- 219 (342)
...+.....+||-.| +.+|+.++.+|+.+ +.+|+.+..+++..+.+++ +.|...-++.... +..+.+.++.
T Consensus 73 ~l~~~~~ak~iLEiG--T~~GySal~la~al~~~g~v~tiE~~~~~~~~Ar~~~~~ag~~~~I~~~~G-~a~e~L~~l~~ 149 (247)
T PLN02589 73 MLLKLINAKNTMEIG--VYTGYSLLATALALPEDGKILAMDINRENYELGLPVIQKAGVAHKIDFREG-PALPVLDQMIE 149 (247)
T ss_pred HHHHHhCCCEEEEEe--ChhhHHHHHHHhhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEec-cHHHHHHHHHh
Confidence 345556667899998 78899999999876 5699999999887766653 3465433444444 5556666543
Q ss_pred ----CCCccEEE-eCCCh---hhHHHHHHhhhhCCEEEE
Q 019332 220 ----PEGIDIYF-ENVGG---KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 220 ----~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~ 250 (342)
.+.||+|| |+--. ..++.++++|++||.++.
T Consensus 150 ~~~~~~~fD~iFiDadK~~Y~~y~~~~l~ll~~GGviv~ 188 (247)
T PLN02589 150 DGKYHGTFDFIFVDADKDNYINYHKRLIDLVKVGGVIGY 188 (247)
T ss_pred ccccCCcccEEEecCCHHHhHHHHHHHHHhcCCCeEEEE
Confidence 14699875 44433 367788999999999775
|
|
| >TIGR00080 pimt protein-L-isoaspartate(D-aspartate) O-methyltransferase | Back alignment and domain information |
|---|
Probab=96.45 E-value=0.026 Score=47.26 Aligned_cols=100 Identities=19% Similarity=0.208 Sum_probs=64.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
+...++++++||-.| +|.|..++.+++..+. +|+++..+++-.+.+++ ++|.+.+ ..... +..+... ..
T Consensus 71 ~~l~~~~~~~VLDiG--~GsG~~a~~la~~~~~~g~V~~vD~~~~~~~~A~~~~~~~g~~~v-~~~~~-d~~~~~~--~~ 144 (215)
T TIGR00080 71 ELLELKPGMKVLEIG--TGSGYQAAVLAEIVGRDGLVVSIERIPELAEKAERRLRKLGLDNV-IVIVG-DGTQGWE--PL 144 (215)
T ss_pred HHhCCCCcCEEEEEC--CCccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCe-EEEEC-CcccCCc--cc
Confidence 456789999999998 5778888888887654 79999999876666653 3344321 11111 2111111 11
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.||+|+-.... .......+.|+++|+++..
T Consensus 145 ~~fD~Ii~~~~~~~~~~~~~~~L~~gG~lv~~ 176 (215)
T TIGR00080 145 APYDRIYVTAAGPKIPEALIDQLKEGGILVMP 176 (215)
T ss_pred CCCCEEEEcCCcccccHHHHHhcCcCcEEEEE
Confidence 269987754433 4556788999999998754
|
Among the prokaryotes, the gene name is pcm. Among eukaryotes, pimt. |
| >PRK07402 precorrin-6B methylase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.096 Score=43.10 Aligned_cols=104 Identities=16% Similarity=0.213 Sum_probs=63.5
Q ss_pred hhhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 145 YEVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 145 ~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
....+++++++||=.| .|.|..++.+++.. +.+|++++.+++..+.+++ +++...+ ..... +..+.+....
T Consensus 33 ~~~l~~~~~~~VLDiG--~G~G~~~~~la~~~~~~~V~~vD~s~~~~~~a~~n~~~~~~~~v-~~~~~-d~~~~~~~~~- 107 (196)
T PRK07402 33 ISQLRLEPDSVLWDIG--AGTGTIPVEAGLLCPKGRVIAIERDEEVVNLIRRNCDRFGVKNV-EVIEG-SAPECLAQLA- 107 (196)
T ss_pred HHhcCCCCCCEEEEeC--CCCCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCCe-EEEEC-chHHHHhhCC-
Confidence 3445778899988887 45566677777654 5699999999987776653 3454321 11111 3222232222
Q ss_pred CCccE-EEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 221 EGIDI-YFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 ~~~d~-vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
..+|. .++.... ..+..+.+.|+++|+++....
T Consensus 108 ~~~d~v~~~~~~~~~~~l~~~~~~LkpgG~li~~~~ 143 (196)
T PRK07402 108 PAPDRVCIEGGRPIKEILQAVWQYLKPGGRLVATAS 143 (196)
T ss_pred CCCCEEEEECCcCHHHHHHHHHHhcCCCeEEEEEee
Confidence 22344 4543322 467888899999999887643
|
|
| >PRK08936 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.42 E-value=0.022 Score=49.07 Aligned_cols=81 Identities=19% Similarity=0.174 Sum_probs=50.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHH---HcCCC---eeEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|...++.+...|++|+.+.+++. +...+.+ ..+.. ...|..+.....+.+.+.. .+.
T Consensus 6 ~~k~~lItGa~~gIG~~ia~~l~~~G~~vvi~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~i~~~~~~~~~~~g~ 85 (261)
T PRK08936 6 EGKVVVITGGSTGLGRAMAVRFGKEKAKVVINYRSDEEEANDVAEEIKKAGGEAIAVKGDVTVESDVVNLIQTAVKEFGT 85 (261)
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4679999999999999999999899999888877542 2222221 22321 1234444312222222221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+++++.|.
T Consensus 86 id~lv~~ag~ 95 (261)
T PRK08936 86 LDVMINNAGI 95 (261)
T ss_pred CCEEEECCCC
Confidence 9999998884
|
|
| >KOG1200 consensus Mitochondrial/plastidial beta-ketoacyl-ACP reductase [Lipid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.41 E-value=0.029 Score=45.14 Aligned_cols=79 Identities=15% Similarity=0.211 Sum_probs=53.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--Ce-eE--ecCCchhHHHHHHHHC--CCCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--DE-AF--NYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~~-v~--~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
...+|+|++++||.+..|+....|++|.+.+.+.+..+.....++. ++ .| |-.+..+....+++.. .|.++++
T Consensus 15 k~~~vtGg~sGIGrAia~~la~~Garv~v~dl~~~~A~ata~~L~g~~~h~aF~~DVS~a~~v~~~l~e~~k~~g~psvl 94 (256)
T KOG1200|consen 15 KVAAVTGGSSGIGRAIAQLLAKKGARVAVADLDSAAAEATAGDLGGYGDHSAFSCDVSKAHDVQNTLEEMEKSLGTPSVL 94 (256)
T ss_pred ceeEEecCCchHHHHHHHHHHhcCcEEEEeecchhhHHHHHhhcCCCCccceeeeccCcHHHHHHHHHHHHHhcCCCcEE
Confidence 4578999999999999999999999999998776655444436665 22 22 2223212222233332 2369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
.+|+|-
T Consensus 95 VncAGI 100 (256)
T KOG1200|consen 95 VNCAGI 100 (256)
T ss_pred EEcCcc
Confidence 999994
|
|
| >PRK12745 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.40 E-value=0.024 Score=48.62 Aligned_cols=79 Identities=11% Similarity=0.164 Sum_probs=49.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.++||+|++|++|..+++.+...|++|++++++.. +.+...+. .+.. . ..|..+..++.+.+.+... +.+|
T Consensus 3 k~vlItG~sg~iG~~la~~L~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 82 (256)
T PRK12745 3 PVALVTGGRRGIGLGIARALAAAGFDLAINDRPDDEELAATQQELRALGVEVIFFPADVADLSAHEAMLDAAQAAWGRID 82 (256)
T ss_pred cEEEEeCCCchHHHHHHHHHHHCCCEEEEEecCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHhcCCCC
Confidence 57999999999999999888888999999887543 22222112 2321 1 2344443233332332221 3589
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (256)
T PRK12745 83 CLVNNAGV 90 (256)
T ss_pred EEEECCcc
Confidence 99999874
|
|
| >PF03807 F420_oxidored: NADP oxidoreductase coenzyme F420-dependent; InterPro: IPR004455 The function of F420-dependent NADP reductase is the transfer of electrons from reduced coenzyme F420 into an electron transport chain | Back alignment and domain information |
|---|
Probab=96.39 E-value=0.12 Score=36.96 Aligned_cols=86 Identities=21% Similarity=0.193 Sum_probs=58.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC---CEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG---CYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g---a~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+|.|.|+ |.+|.+.++-....| .+|+.+ .+++++.+.+.++++...... +..+.+++ .|++|-|+
T Consensus 1 kI~iIG~-G~mg~al~~~l~~~g~~~~~v~~~~~r~~~~~~~~~~~~~~~~~~~-----~~~~~~~~-----advvilav 69 (96)
T PF03807_consen 1 KIGIIGA-GNMGSALARGLLASGIKPHEVIIVSSRSPEKAAELAKEYGVQATAD-----DNEEAAQE-----ADVVILAV 69 (96)
T ss_dssp EEEEEST-SHHHHHHHHHHHHTTS-GGEEEEEEESSHHHHHHHHHHCTTEEESE-----EHHHHHHH-----TSEEEE-S
T ss_pred CEEEECC-CHHHHHHHHHHHHCCCCceeEEeeccCcHHHHHHHHHhhccccccC-----ChHHhhcc-----CCEEEEEE
Confidence 4778885 999999999998888 789855 899999888875777532211 23334443 79999999
Q ss_pred ChhhHHHHHHhh---hhCCEEEEE
Q 019332 231 GGKMLDAVLLNM---KIHGRIAVC 251 (342)
Q Consensus 231 g~~~~~~~~~~l---~~~G~~v~~ 251 (342)
-...+...++.+ .++..++.+
T Consensus 70 ~p~~~~~v~~~i~~~~~~~~vis~ 93 (96)
T PF03807_consen 70 KPQQLPEVLSEIPHLLKGKLVISI 93 (96)
T ss_dssp -GGGHHHHHHHHHHHHTTSEEEEE
T ss_pred CHHHHHHHHHHHhhccCCCEEEEe
Confidence 987666666554 344555544
|
It catalyses the reduction of F420 with NADP(+) and the reduction of NADP(+) with F420H(2).; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 2IZZ_B 2GR9_B 2GRA_B 2GER_C 2AMF_E 2AHR_C 2VQ3_B 2VNS_B 2RCY_D 2YJZ_D .... |
| >COG0169 AroE Shikimate 5-dehydrogenase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.36 E-value=0.026 Score=49.02 Aligned_cols=47 Identities=21% Similarity=0.316 Sum_probs=40.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFG 198 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g 198 (342)
.++.+++|.|| ||.+.+++.-+...|+ +++++-|+.+|.+.+.+.++
T Consensus 124 ~~~~~vlilGA-GGAarAv~~aL~~~g~~~i~V~NRt~~ra~~La~~~~ 171 (283)
T COG0169 124 VTGKRVLILGA-GGAARAVAFALAEAGAKRITVVNRTRERAEELADLFG 171 (283)
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhh
Confidence 35799999997 9999999999999997 89999999999887774555
|
|
| >TIGR02685 pter_reduc_Leis pteridine reductase | Back alignment and domain information |
|---|
Probab=96.34 E-value=0.028 Score=48.68 Aligned_cols=79 Identities=15% Similarity=0.161 Sum_probs=48.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHHHcC----CC-e--eEecCCchhH---HHH-HHHHC--
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKNKFG----FD-E--AFNYKEEPDL---NEA-LKRYF-- 219 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~~~g----~~-~--v~~~~~~~~~---~~~-i~~~~-- 219 (342)
.+++|+||++++|.+.++.+...|++|++++++ +++.+.+.+++. .. . ..|..+.... .+. +.+..
T Consensus 2 ~~~lITGas~gIG~~~a~~l~~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~~~~~~~~~~~~~~~~ 81 (267)
T TIGR02685 2 PAAVVTGAAKRIGSSIAVALHQEGYRVVLHYHRSAAAASTLAAELNARRPNSAVTCQADLSNSATLFSRCEAIIDACFRA 81 (267)
T ss_pred CEEEEeCCCCcHHHHHHHHHHhCCCeEEEEcCCcHHHHHHHHHHHHhccCCceEEEEccCCCchhhHHHHHHHHHHHHHc
Confidence 478999999999999999998899999988654 344433322332 11 1 1244433111 122 22211
Q ss_pred CCCccEEEeCCCh
Q 019332 220 PEGIDIYFENVGG 232 (342)
Q Consensus 220 ~~~~d~vid~~g~ 232 (342)
.+++|++++++|.
T Consensus 82 ~g~iD~lv~nAG~ 94 (267)
T TIGR02685 82 FGRCDVLVNNASA 94 (267)
T ss_pred cCCceEEEECCcc
Confidence 2369999999883
|
Pteridine reductase is an enzyme used by trypanosomatids (including Trypanosoma cruzi and Leishmania major) to obtain reduced pteridines by salvage rather than biosynthetic pathways. Enzymes in T. cruzi described as pteridine reductase 1 (PTR1) and pteridine reductase 2 (PTR2) have different activity profiles. PTR1 is more active with with fully oxidized biopterin and folate than with reduced forms, while PTR2 reduces dihydrobiopterin and dihydrofolate but not oxidized pteridines. T. cruzi PTR1 and PTR2 are more similar to each other in sequence than either is to the pteridine reductase of Leishmania major, and all are included in this family. |
| >PRK00811 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=96.33 E-value=0.037 Score=48.41 Aligned_cols=96 Identities=10% Similarity=0.077 Sum_probs=62.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcC-----C--CeeEecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFG-----F--DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g-----~--~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
+.++||+.| +|.|..+..+++..+. +|+++..+++-.+.+++.+. . +.-+..... |..+.+++ ..+.+
T Consensus 76 ~p~~VL~iG--~G~G~~~~~~l~~~~~~~V~~VEid~~vv~~a~~~~~~~~~~~~~d~rv~v~~~-Da~~~l~~-~~~~y 151 (283)
T PRK00811 76 NPKRVLIIG--GGDGGTLREVLKHPSVEKITLVEIDERVVEVCRKYLPEIAGGAYDDPRVELVIG-DGIKFVAE-TENSF 151 (283)
T ss_pred CCCEEEEEe--cCchHHHHHHHcCCCCCEEEEEeCCHHHHHHHHHHhHHhccccccCCceEEEEC-chHHHHhh-CCCcc
Confidence 457899999 4567778888887665 89999999987777774332 1 111111112 33344443 34479
Q ss_pred cEEEeCCC-----------hhhHHHHHHhhhhCCEEEEE
Q 019332 224 DIYFENVG-----------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 224 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~ 251 (342)
|+|+--.. .+.+..+.+.|+++|.++.-
T Consensus 152 DvIi~D~~dp~~~~~~l~t~ef~~~~~~~L~~gGvlv~~ 190 (283)
T PRK00811 152 DVIIVDSTDPVGPAEGLFTKEFYENCKRALKEDGIFVAQ 190 (283)
T ss_pred cEEEECCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 99875321 13467788999999998863
|
|
| >PRK07578 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.069 Score=43.92 Aligned_cols=64 Identities=14% Similarity=0.212 Sum_probs=42.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+++|+|+++++|.+.+..+... ++|+.++++... ..+|..+...+.+.+.+. +++|+++++.|.
T Consensus 2 ~vlItGas~giG~~la~~l~~~-~~vi~~~r~~~~-----------~~~D~~~~~~~~~~~~~~--~~id~lv~~ag~ 65 (199)
T PRK07578 2 KILVIGASGTIGRAVVAELSKR-HEVITAGRSSGD-----------VQVDITDPASIRALFEKV--GKVDAVVSAAGK 65 (199)
T ss_pred eEEEEcCCcHHHHHHHHHHHhc-CcEEEEecCCCc-----------eEecCCChHHHHHHHHhc--CCCCEEEECCCC
Confidence 6899999999999877776655 899999876431 123444431333333322 368999988873
|
|
| >TIGR02469 CbiT precorrin-6Y C5,15-methyltransferase (decarboxylating), CbiT subunit | Back alignment and domain information |
|---|
Probab=96.30 E-value=0.062 Score=40.23 Aligned_cols=98 Identities=21% Similarity=0.308 Sum_probs=64.8
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHH---HcCCCe--eEecCCchhHHHHHHHHCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKN---KFGFDE--AFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~i~~~~~ 220 (342)
...+.++++|+-.|. |.|..+..+++..+ .+|++++.++...+.+++ .++... ++.. +....+.. ..
T Consensus 14 ~~~~~~~~~vldlG~--G~G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~~----~~~~~~~~-~~ 86 (124)
T TIGR02469 14 KLRLRPGDVLWDIGA--GSGSITIEAARLVPNGRVYAIERNPEALRLIERNARRFGVSNIVIVEG----DAPEALED-SL 86 (124)
T ss_pred HcCCCCCCEEEEeCC--CCCHHHHHHHHHCCCceEEEEcCCHHHHHHHHHHHHHhCCCceEEEec----cccccChh-hc
Confidence 345677889999984 45999999998875 599999999887776652 234322 2222 11111111 11
Q ss_pred CCccEEEeCCCh----hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYFENVGG----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~ 251 (342)
+.+|+|+-..+. ..+..+.+.|+++|+++..
T Consensus 87 ~~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~li~~ 121 (124)
T TIGR02469 87 PEPDRVFIGGSGGLLQEILEAIWRRLRPGGRIVLN 121 (124)
T ss_pred CCCCEEEECCcchhHHHHHHHHHHHcCCCCEEEEE
Confidence 369999875532 3677889999999998864
|
This model recognizes the CbiT methylase which is responsible, in part (along with CbiE), for methylating precorrin-6y (or cobalt-precorrin-6y) at both the 5 and 15 positions as well as the concomitant decarbozylation at C-12. In many organisms, this protein is fused to the CbiE subunit. The fused protein, when found in organisms catalyzing the oxidative version of the cobalamin biosynthesis pathway, is called CobL. |
| >COG0031 CysK Cysteine synthase [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=96.28 E-value=0.14 Score=44.64 Aligned_cols=104 Identities=18% Similarity=0.217 Sum_probs=68.8
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEecCCc---------------
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNYKEE--------------- 208 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~~~~--------------- 208 (342)
.+.+++|. .+|=+.+|.+|.+.+.+|+..|++++.+.. |.+|.+.++ .+|+.-++....+
T Consensus 56 ~G~l~pG~-tIVE~TSGNTGI~LA~vaa~~Gy~~iivmP~~~S~er~~~l~-a~GAevi~t~~~~g~~~~a~~~a~el~~ 133 (300)
T COG0031 56 RGLLKPGG-TIVEATSGNTGIALAMVAAAKGYRLIIVMPETMSQERRKLLR-ALGAEVILTPGAPGNMKGAIERAKELAA 133 (300)
T ss_pred cCCCCCCC-EEEEcCCChHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHH-HcCCEEEEcCCCCCchHHHHHHHHHHHH
Confidence 36799998 557777899999999999999998777764 667888888 8988543322211
Q ss_pred ----------------------hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhh---CCEEEEEc
Q 019332 209 ----------------------PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKI---HGRIAVCG 252 (342)
Q Consensus 209 ----------------------~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~---~G~~v~~g 252 (342)
.....+|.+.+++.+|.++-.+|. -++.-..+.|+. +=+++.+.
T Consensus 134 ~~p~~~~~~~Qf~NpaN~~aH~~tT~~EI~~~~~g~~d~fVagvGTGGTitGvar~Lk~~~p~i~iv~vd 203 (300)
T COG0031 134 EIPGYAVWLNQFENPANPEAHYETTGPEIWQQTDGKVDAFVAGVGTGGTITGVARYLKERNPNVRIVAVD 203 (300)
T ss_pred hCCCceEchhhcCCCccHHHHHhhhHHHHHHHhCCCCCEEEEeCCcchhHHHHHHHHHhhCCCcEEEEEC
Confidence 012334444455567888877776 555555555554 34555443
|
|
| >PF06325 PrmA: Ribosomal protein L11 methyltransferase (PrmA); InterPro: IPR010456 This family consists of several Ribosomal protein L11 methyltransferase sequences | Back alignment and domain information |
|---|
Probab=96.26 E-value=0.027 Score=49.27 Aligned_cols=148 Identities=20% Similarity=0.225 Sum_probs=80.2
Q ss_pred CCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh-cCCCCCCEEEEecCCcHHHHHH
Q 019332 91 PEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLV 169 (342)
Q Consensus 91 ~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~-~~~~~~~~vlI~ga~g~vG~~a 169 (342)
+.+++|++.+...+|.++-.-+...++.+ .+. +.|-.+ ...|...||... ....++++||=.| .|.|..+
T Consensus 106 ~P~~vg~~~~I~P~w~~~~~~~~~~~I~i-dPg--~AFGTG----~H~TT~lcl~~l~~~~~~g~~vLDvG--~GSGILa 176 (295)
T PF06325_consen 106 KPIRVGDRLVIVPSWEEYPEPPDEIVIEI-DPG--MAFGTG----HHPTTRLCLELLEKYVKPGKRVLDVG--CGSGILA 176 (295)
T ss_dssp --EEECTTEEEEETT----SSTTSEEEEE-STT--SSS-SS----HCHHHHHHHHHHHHHSSTTSEEEEES---TTSHHH
T ss_pred ccEEECCcEEEECCCcccCCCCCcEEEEE-CCC--CcccCC----CCHHHHHHHHHHHHhccCCCEEEEeC--CcHHHHH
Confidence 44678998888888888833234446777 444 443111 112222232221 1267889999888 4566666
Q ss_pred HHHHHHcCC-EEEEEeCChhhHHHHHH---HcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCCChhh----HHHHHH
Q 019332 170 GQFAKLLGC-YVVGSAGSKDKIDLLKN---KFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM----LDAVLL 240 (342)
Q Consensus 170 i~la~~~ga-~Vi~~~~s~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~----~~~~~~ 240 (342)
+..++ +|| +|++++.++.-.+.+++ .-|.. .+.-.... +. ..+.||+|+-..-... +....+
T Consensus 177 iaA~k-lGA~~v~a~DiDp~Av~~a~~N~~~N~~~~~~~v~~~~-~~-------~~~~~dlvvANI~~~vL~~l~~~~~~ 247 (295)
T PF06325_consen 177 IAAAK-LGAKKVVAIDIDPLAVEAARENAELNGVEDRIEVSLSE-DL-------VEGKFDLVVANILADVLLELAPDIAS 247 (295)
T ss_dssp HHHHH-TTBSEEEEEESSCHHHHHHHHHHHHTT-TTCEEESCTS-CT-------CCS-EEEEEEES-HHHHHHHHHHCHH
T ss_pred HHHHH-cCCCeEEEecCCHHHHHHHHHHHHHcCCCeeEEEEEec-cc-------ccccCCEEEECCCHHHHHHHHHHHHH
Confidence 55555 488 89999988865444442 12222 22111111 11 1146999986666543 344556
Q ss_pred hhhhCCEEEEEceecc
Q 019332 241 NMKIHGRIAVCGMISQ 256 (342)
Q Consensus 241 ~l~~~G~~v~~g~~~~ 256 (342)
+++++|.+++.|....
T Consensus 248 ~l~~~G~lIlSGIl~~ 263 (295)
T PF06325_consen 248 LLKPGGYLILSGILEE 263 (295)
T ss_dssp HEEEEEEEEEEEEEGG
T ss_pred hhCCCCEEEEccccHH
Confidence 7899999999998654
|
Its genetic determinant is prmA, which forms a bifunctional operon with the downstream panF gene []. The role of L11 methylation in ribosome function is, as yet, unknown. Deletion of the prmA gene in Escherichia coli showed no obvious effect [] except for the production of undermethylated forms of L11 []. Methylation is the most common post-transcriptional modification to ribosomal proteins in all organisms. PrmA is the only bacterial enzyme that catalyses the methylation of a ribosomal protein [].; GO: 0008276 protein methyltransferase activity, 0006479 protein methylation, 0005737 cytoplasm; PDB: 3GRZ_B 1F3L_A 2NXJ_B 3CJT_I 3CJQ_G 2NXE_A 2NXC_A 2ZBP_A 3EGV_A 3CJS_A .... |
| >TIGR03589 PseB UDP-N-acetylglucosamine 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=96.24 E-value=0.029 Score=50.18 Aligned_cols=76 Identities=14% Similarity=0.119 Sum_probs=48.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHHcCCC--ee--EecCCchhHHHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNKFGFD--EA--FNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
.+.+|||+||+|.+|...++.+...| .+|++.+++..+...+.+.+... .+ .|..+. +.+.+... ++|+
T Consensus 3 ~~k~vLVTGatG~IG~~l~~~L~~~g~~~~V~~~~r~~~~~~~~~~~~~~~~~~~v~~Dl~d~----~~l~~~~~-~iD~ 77 (324)
T TIGR03589 3 NNKSILITGGTGSFGKAFISRLLENYNPKKIIIYSRDELKQWEMQQKFPAPCLRFFIGDVRDK----ERLTRALR-GVDY 77 (324)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHhCCCcEEEEEcCChhHHHHHHHHhCCCcEEEEEccCCCH----HHHHHHHh-cCCE
Confidence 36789999999999998888776665 68998887766544333233221 11 244433 22333222 4899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
||.++|.
T Consensus 78 Vih~Ag~ 84 (324)
T TIGR03589 78 VVHAAAL 84 (324)
T ss_pred EEECccc
Confidence 9998873
|
This enzyme catalyzes the first step in the biosynthesis of pseudaminic acid, the conversion of UDP-N-acetylglucosamine to UDP-4-keto-6-deoxy-N-acetylglucosamine. These sequences are members of the broader pfam01073 (3-beta hydroxysteroid dehydrogenase/isomerase family) family. |
| >TIGR00507 aroE shikimate 5-dehydrogenase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.096 Score=45.52 Aligned_cols=95 Identities=16% Similarity=0.137 Sum_probs=60.4
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
...+.+++|.|+ |++|.+++..+...|++|++..++.++.+.+.++++.. .+... .+.+ .....+|++++
T Consensus 114 ~~~~k~vliiGa-Gg~g~aia~~L~~~g~~v~v~~R~~~~~~~la~~~~~~~~~~~~----~~~~----~~~~~~DivIn 184 (270)
T TIGR00507 114 LRPNQRVLIIGA-GGAARAVALPLLKADCNVIIANRTVSKAEELAERFQRYGEIQAF----SMDE----LPLHRVDLIIN 184 (270)
T ss_pred CccCCEEEEEcC-cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhcCceEEe----chhh----hcccCccEEEE
Confidence 345778999997 89999988888888999999999888766555344321 11111 1111 11125899999
Q ss_pred CCChhhHH------HHHHhhhhCCEEEEEce
Q 019332 229 NVGGKMLD------AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 229 ~~g~~~~~------~~~~~l~~~G~~v~~g~ 253 (342)
|.+..... .....++++..++.+..
T Consensus 185 atp~gm~~~~~~~~~~~~~l~~~~~v~D~~y 215 (270)
T TIGR00507 185 ATSAGMSGNIDEPPVPAEKLKEGMVVYDMVY 215 (270)
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 98853111 12345677777776644
|
This model finds proteins from prokaryotes and functionally equivalent domains from larger, multifunctional proteins of fungi and plants. Below the trusted cutoff of 180, but above the noise cutoff of 20, are the putative shikimate dehydrogenases of Thermotoga maritima and Mycobacterium tuberculosis, and uncharacterized paralogs of shikimate dehydrogenase from E. coli and H. influenzae. The related enzyme quinate 5-dehydrogenase scores below the noise cutoff. A neighbor-joining tree, constructed with quinate 5-dehydrogenases as the outgroup, shows the Clamydial homolog as clustering among the shikimate dehydrogenases, although the sequence is unusual in the degree of sequence divergence and the presence of an additional N-terminal domain. |
| >PRK12825 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.031 Score=47.47 Aligned_cols=79 Identities=20% Similarity=0.297 Sum_probs=48.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHH---HcCCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
..++||+||+|++|..+++.+...|++|+++.++..+ .+.+.+ ..+.. . ..|..+...+.+.+.+... +++
T Consensus 6 ~~~vlItGasg~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~i 85 (249)
T PRK12825 6 GRVALVTGAARGLGRAIALRLARAGADVVVHYRSDEEAAEELVEAVEALGRRAQAVQADVTDKAALEAAVAAAVERFGRI 85 (249)
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCcCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998899998876665443 222221 22221 1 1344443123333322211 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|.+|.++|
T Consensus 86 d~vi~~ag 93 (249)
T PRK12825 86 DILVNNAG 93 (249)
T ss_pred CEEEECCc
Confidence 99999987
|
|
| >cd01065 NAD_bind_Shikimate_DH NAD(P) binding domain of Shikimate dehydrogenase | Back alignment and domain information |
|---|
Probab=96.23 E-value=0.036 Score=43.56 Aligned_cols=94 Identities=24% Similarity=0.219 Sum_probs=61.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
..+.+++|+|+ |++|...++.+...| .+|++..++.++.+.+.++++... ..... +..+.+ +++|+|+.
T Consensus 17 ~~~~~i~iiG~-G~~g~~~a~~l~~~g~~~v~v~~r~~~~~~~~~~~~~~~~~~~~~~---~~~~~~-----~~~Dvvi~ 87 (155)
T cd01065 17 LKGKKVLILGA-GGAARAVAYALAELGAAKIVIVNRTLEKAKALAERFGELGIAIAYL---DLEELL-----AEADLIIN 87 (155)
T ss_pred CCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHHhhcccceeec---chhhcc-----ccCCEEEe
Confidence 45678999997 999999988888886 589999988887766543555421 01111 221111 35999999
Q ss_pred CCChhhH-----HHHHHhhhhCCEEEEEce
Q 019332 229 NVGGKML-----DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 229 ~~g~~~~-----~~~~~~l~~~G~~v~~g~ 253 (342)
|++.... ......++++..++.++.
T Consensus 88 ~~~~~~~~~~~~~~~~~~~~~~~~v~D~~~ 117 (155)
T cd01065 88 TTPVGMKPGDELPLPPSLLKPGGVVYDVVY 117 (155)
T ss_pred CcCCCCCCCCCCCCCHHHcCCCCEEEEcCc
Confidence 9887432 122345667777777755
|
Shikimate dehydrogenase (DH) is an amino acid DH family member. Shikimate pathway links metabolism of carbohydrates to de novo biosynthesis of aromatic amino acids, quinones and folate. It is essential in plants, bacteria, and fungi but absent in mammals, thus making enzymes involved in this pathway ideal targets for broad spectrum antibiotics and herbicides. Shikimate DH catalyzes the reduction of 3-hydroshikimate to shikimate using the cofactor NADH. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann |
| >PLN02366 spermidine synthase | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.048 Score=48.20 Aligned_cols=97 Identities=18% Similarity=0.119 Sum_probs=60.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC------CeeEecCCchhHHHHHHHHCCCCc
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF------DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
.+.++||+.|+ |-|..+..+++..+. +|.++..+++=.+.+++-+.. +.-+..... |..+.+++..++.+
T Consensus 90 ~~pkrVLiIGg--G~G~~~rellk~~~v~~V~~VEiD~~Vi~~ar~~f~~~~~~~~dpRv~vi~~-Da~~~l~~~~~~~y 166 (308)
T PLN02366 90 PNPKKVLVVGG--GDGGVLREIARHSSVEQIDICEIDKMVIDVSKKFFPDLAVGFDDPRVNLHIG-DGVEFLKNAPEGTY 166 (308)
T ss_pred CCCCeEEEEcC--CccHHHHHHHhCCCCCeEEEEECCHHHHHHHHHhhhhhccccCCCceEEEEC-hHHHHHhhccCCCC
Confidence 45678999995 447777788887765 888988888766666632321 111111112 33334444323479
Q ss_pred cEEEe-CCC---------h-hhHHHHHHhhhhCCEEEE
Q 019332 224 DIYFE-NVG---------G-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 224 d~vid-~~g---------~-~~~~~~~~~l~~~G~~v~ 250 (342)
|+||- +.. . +.+..+.++|+++|.++.
T Consensus 167 DvIi~D~~dp~~~~~~L~t~ef~~~~~~~L~pgGvlv~ 204 (308)
T PLN02366 167 DAIIVDSSDPVGPAQELFEKPFFESVARALRPGGVVCT 204 (308)
T ss_pred CEEEEcCCCCCCchhhhhHHHHHHHHHHhcCCCcEEEE
Confidence 98764 222 1 357788999999999874
|
|
| >TIGR03649 ergot_EASG ergot alkaloid biosynthesis protein, AFUA_2G17970 family | Back alignment and domain information |
|---|
Probab=96.22 E-value=0.032 Score=48.85 Aligned_cols=95 Identities=8% Similarity=0.099 Sum_probs=61.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCC-CC-ccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFP-EG-IDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~-~~-~d~vid~~g 231 (342)
+|||+||+|.+|..+++.+...|.+|.+.+|++++.. ..+.. ...|+.+...+.+.++.... .+ +|.++-+.+
T Consensus 1 ~ilVtGatG~iG~~vv~~L~~~g~~V~~~~R~~~~~~----~~~~~~~~~d~~d~~~l~~a~~~~~~~~g~~d~v~~~~~ 76 (285)
T TIGR03649 1 TILLTGGTGKTASRIARLLQAASVPFLVASRSSSSSA----GPNEKHVKFDWLDEDTWDNPFSSDDGMEPEISAVYLVAP 76 (285)
T ss_pred CEEEEcCCChHHHHHHHHHHhCCCcEEEEeCCCcccc----CCCCccccccCCCHHHHHHHHhcccCcCCceeEEEEeCC
Confidence 4899999999999999988888999999999877532 22332 23566554233333322111 25 899987776
Q ss_pred h-----hhHHHHHHhhhhCC--EEEEEce
Q 019332 232 G-----KMLDAVLLNMKIHG--RIAVCGM 253 (342)
Q Consensus 232 ~-----~~~~~~~~~l~~~G--~~v~~g~ 253 (342)
. ......++.++..| ++|.++.
T Consensus 77 ~~~~~~~~~~~~i~aa~~~gv~~~V~~Ss 105 (285)
T TIGR03649 77 PIPDLAPPMIKFIDFARSKGVRRFVLLSA 105 (285)
T ss_pred CCCChhHHHHHHHHHHHHcCCCEEEEeec
Confidence 3 12334555555554 7887765
|
This family consists of fungal proteins of unknown function associated with secondary metabolite biosynthesis, such as of the ergot alkaloids such as ergovaline. Nomenclature differs because gene order differs - this is EasG in Neotyphodium lolii but is designated ergot alkaloid biosynthetic protein A in several other fungi. |
| >PRK07041 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.19 E-value=0.023 Score=47.90 Aligned_cols=74 Identities=12% Similarity=0.199 Sum_probs=49.9
Q ss_pred EEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--CCC-ee--EecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 157 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--GFD-EA--FNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
||+||+|++|.+.++.+...|++|++++++.++.+.+.+.+ +.. ++ .|..+...+.+.+.+. +.+|+++++.|
T Consensus 1 lItGas~~iG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~--~~id~li~~ag 78 (230)
T PRK07041 1 LVVGGSSGIGLALARAFAAEGARVTIASRSRDRLAAAARALGGGAPVRTAALDITDEAAVDAFFAEA--GPFDHVVITAA 78 (230)
T ss_pred CeecCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHhc--CCCCEEEECCC
Confidence 58999999999998888888999999999877665544233 221 22 3444442333333322 35899999987
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 79 ~ 79 (230)
T PRK07041 79 D 79 (230)
T ss_pred C
Confidence 4
|
|
| >TIGR01809 Shik-DH-AROM shikimate-5-dehydrogenase, fungal AROM-type | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.023 Score=49.66 Aligned_cols=75 Identities=12% Similarity=-0.017 Sum_probs=51.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+.+++|.|+ |+.|.+++..+...|+ +|+++.|+.+|.+.+.++++.. .+.... ..+++.... ..+|+|++|
T Consensus 124 ~~k~vlvlGa-GGaarai~~aL~~~G~~~i~I~nRt~~ka~~La~~~~~~~~~~~~~----~~~~~~~~~-~~~DiVIna 197 (282)
T TIGR01809 124 AGFRGLVIGA-GGTSRAAVYALASLGVTDITVINRNPDKLSRLVDLGVQVGVITRLE----GDSGGLAIE-KAAEVLVST 197 (282)
T ss_pred CCceEEEEcC-cHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHhhhcCcceecc----chhhhhhcc-cCCCEEEEC
Confidence 5778999997 9999999998888998 8999999998887766455431 111111 111121111 258999999
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
...
T Consensus 198 Tp~ 200 (282)
T TIGR01809 198 VPA 200 (282)
T ss_pred CCC
Confidence 875
|
This model represents a clade of shikimate-5-dehydrogenases found in Corynebacterium, Mycobacteria and fungi. The fungal sequences are pentafunctional proteins known as AroM which contain the central five seven steps in the chorismate biosynthesis pathway. The Corynebacterium and Mycobacterial sequences represent the sole shikimate-5-dehydrogenases in species which otherwise have every enzyme of the chorismate biosynthesis pathway. |
| >PRK12935 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.17 E-value=0.035 Score=47.31 Aligned_cols=81 Identities=22% Similarity=0.276 Sum_probs=49.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHH---cCCC-ee--EecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNK---FGFD-EA--FNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.+++|+|++|++|..+++.+...|++|+++.+ ++++.+.+.+. .+.. .. +|..+...+.+.+.+... +.
T Consensus 5 ~~~~~lItG~s~~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 84 (247)
T PRK12935 5 NGKVAIVTGGAKGIGKAITVALAQEGAKVVINYNSSKEAAENLVNELGKEGHDVYAVQADVSKVEDANRLVEEAVNHFGK 84 (247)
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHcCCEEEEEcCCcHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3679999999999999999888888999887654 33333322212 2321 11 233333123333333221 25
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|.++.++|.
T Consensus 85 id~vi~~ag~ 94 (247)
T PRK12935 85 VDILVNNAGI 94 (247)
T ss_pred CCEEEECCCC
Confidence 8999999885
|
|
| >PF01262 AlaDh_PNT_C: Alanine dehydrogenase/PNT, C-terminal domain; InterPro: IPR007698 Alanine dehydrogenases (1 | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.032 Score=44.73 Aligned_cols=96 Identities=26% Similarity=0.280 Sum_probs=63.1
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEe-c-----------------CCc--hhHHH
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFN-Y-----------------KEE--PDLNE 213 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~-~-----------------~~~--~~~~~ 213 (342)
-+|+|+|+ |.+|+.|+++++.+|++|+......++.+... ..+...+.. + ... ..+.+
T Consensus 21 ~~vvv~G~-G~vg~gA~~~~~~lGa~v~~~d~~~~~~~~~~-~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~ 98 (168)
T PF01262_consen 21 AKVVVTGA-GRVGQGAAEIAKGLGAEVVVPDERPERLRQLE-SLGAYFIEVDYEDHLERKDFDKADYYEHPESYESNFAE 98 (168)
T ss_dssp -EEEEEST-SHHHHHHHHHHHHTT-EEEEEESSHHHHHHHH-HTTTEESEETTTTTTTSB-CCHHHCHHHCCHHHHHHHH
T ss_pred eEEEEECC-CHHHHHHHHHHhHCCCEEEeccCCHHHHHhhh-cccCceEEEcccccccccccchhhhhHHHHHhHHHHHH
Confidence 67999996 99999999999999999999999988887777 666643222 1 010 12333
Q ss_pred HHHHHCCCCccEEEeC-C-Chh-----hHHHHHHhhhhCCEEEEEceecc
Q 019332 214 ALKRYFPEGIDIYFEN-V-GGK-----MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 214 ~i~~~~~~~~d~vid~-~-g~~-----~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.+.. +|++|.+ . .+. .....++.|+++.-++.+..-.+
T Consensus 99 ~i~~-----~d~vI~~~~~~~~~~P~lvt~~~~~~m~~gsvIvDis~D~g 143 (168)
T PF01262_consen 99 FIAP-----ADIVIGNGLYWGKRAPRLVTEEMVKSMKPGSVIVDISCDQG 143 (168)
T ss_dssp HHHH------SEEEEHHHBTTSS---SBEHHHHHTSSTTEEEEETTGGGT
T ss_pred HHhh-----CcEEeeecccCCCCCCEEEEhHHhhccCCCceEEEEEecCC
Confidence 3332 7888842 2 111 23566778888888888766433
|
4.1.1 from EC) and pyridine nucleotide transhydrogenase (1.6.1.1 from EC) have been shown to share regions of similarity []. Alanine dehydrogenase catalyzes the NAD-dependent reversible reductive amination of pyruvate into alanine. Pyridine nucleotide transhydrogenase catalyzes the reduction of NADP+ to NADPH with the concomitant oxidation of NADH to NAD+. This enzyme is located in the plasma membrane of prokaryotes and in the inner membrane of the mitochondria of eukaryotes. The transhydrogenation between NADH and NADP is coupled with the translocation of a proton across the membrane. In prokaryotes the enzyme is composed of two different subunits, an alpha chain (gene pntA) and a beta chain (gene pntB), while in eukaryotes it is a single chain protein. The sequence of alanine dehydrogenase from several bacterial species are related with those of the alpha subunit of bacterial pyridine nucleotide transhydrogenase and of the N-terminal half of the eukaryotic enzyme. The two most conserved regions correspond respectively to the N-terminal extremity of these proteins and to a central glycine-rich region which is part of the NAD(H)-binding site. This is a C-terminal domain of alanine dehydrogenases (1.4.1.1 from EC). This domain is also found in the lysine 2-oxoglutarate reductases. ; GO: 0016491 oxidoreductase activity, 0055114 oxidation-reduction process; PDB: 1KOL_A 2EEZ_F 1L7E_C 1PTJ_B 1NM5_A 1HZZ_B 1U2G_B 2FSV_A 2FR8_A 1U2D_A .... |
| >PRK12548 shikimate 5-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.15 E-value=0.043 Score=48.20 Aligned_cols=45 Identities=13% Similarity=0.150 Sum_probs=34.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh---hhHHHHHHHc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKIDLLKNKF 197 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~---~~~~~~~~~~ 197 (342)
.+.+++|+|+ ||+|.+++..+...|+ +|++..++. ++.+.+.+++
T Consensus 125 ~~k~vlI~GA-GGagrAia~~La~~G~~~V~I~~R~~~~~~~a~~l~~~l 173 (289)
T PRK12548 125 KGKKLTVIGA-GGAATAIQVQCALDGAKEITIFNIKDDFYERAEQTAEKI 173 (289)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCchHHHHHHHHHHHH
Confidence 5678999998 8999998888888899 599999886 4544443244
|
|
| >cd01080 NAD_bind_m-THF_DH_Cyclohyd NADP binding domain of methylene-tetrahydrofolate dehydrogenase/cyclohydrolase | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.077 Score=42.39 Aligned_cols=95 Identities=16% Similarity=0.070 Sum_probs=60.3
Q ss_pred cCCchhhHHHhhhhhcCCCCCCEEEEecCCcH-HHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhH
Q 019332 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGA-VGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDL 211 (342)
Q Consensus 133 l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~-vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 211 (342)
.|+....+...+.+...--.+.+|+|.|+ |. +|..++..++..|++|+++.++.+ ++
T Consensus 24 ~p~~~~a~v~l~~~~~~~l~gk~vlViG~-G~~~G~~~a~~L~~~g~~V~v~~r~~~---------------------~l 81 (168)
T cd01080 24 IPCTPAGILELLKRYGIDLAGKKVVVVGR-SNIVGKPLAALLLNRNATVTVCHSKTK---------------------NL 81 (168)
T ss_pred cCChHHHHHHHHHHcCCCCCCCEEEEECC-cHHHHHHHHHHHhhCCCEEEEEECCch---------------------hH
Confidence 34433444444433333357889999998 65 699899999889999888876532 22
Q ss_pred HHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceec
Q 019332 212 NEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 212 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
.+.+.+ +|+||.+++.+.+ --.+.++++-.++.++.+.
T Consensus 82 ~~~l~~-----aDiVIsat~~~~i-i~~~~~~~~~viIDla~pr 119 (168)
T cd01080 82 KEHTKQ-----ADIVIVAVGKPGL-VKGDMVKPGAVVIDVGINR 119 (168)
T ss_pred HHHHhh-----CCEEEEcCCCCce-ecHHHccCCeEEEEccCCC
Confidence 223322 7999999988432 2223466666667777654
|
NADP binding domain of the Methylene-Tetrahydrofolate Dehydrogenase/cyclohydrolase (m-THF DH/cyclohydrolase) bifunctional enzyme. Tetrahydrofolate is a versatile carrier of activated one-carbon units. The major one-carbon folate donors are N-5 methyltetrahydrofolate, N5,N10-m-THF, and N10-formayltetrahydrofolate. The oxidation of metabolic intermediate m-THF to m-THF requires the enzyme m-THF DH. In addition, most DHs also have an associated cyclohydrolase activity which catalyzes its hydrolysis to N10-formyltetrahydrofolate. m-THF DH is typically found as part of a multifunctional protein in eukaryotes. NADP-dependent m-THF DH in mammals, birds and yeast are components of a trifunctional enzyme with DH, cyclohydrolase, and synthetase activities. Certain eukaryotic cells also contain homodimeric bifunctional DH/cyclodrolase form. In bacteria, monofucntional DH, as well a |
| >PRK14027 quinate/shikimate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.14 E-value=0.075 Score=46.41 Aligned_cols=45 Identities=18% Similarity=0.147 Sum_probs=37.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF 197 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~ 197 (342)
.+.+++|.|+ ||.+.+++.-+...|+ ++++..|+.+|.+.+.+++
T Consensus 126 ~~k~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~ka~~La~~~ 171 (283)
T PRK14027 126 KLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVI 171 (283)
T ss_pred CCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEcCCHHHHHHHHHHH
Confidence 4678999997 9999998888888898 8899999988877766444
|
|
| >PRK07792 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=96.13 E-value=0.038 Score=48.99 Aligned_cols=79 Identities=18% Similarity=0.159 Sum_probs=49.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHH---HcCCCe---eEecCCchhH---HHHHHHHCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKN---KFGFDE---AFNYKEEPDL---NEALKRYFPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~---~~~i~~~~~~ 221 (342)
.+.++||+|+++++|.+.++.+...|++|++.+++. .+.+.+.+ ..|... ..|..+.... .+.+.+ .+
T Consensus 11 ~~k~~lVTGas~gIG~~ia~~L~~~Ga~Vv~~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dv~d~~~~~~~~~~~~~--~g 88 (306)
T PRK07792 11 SGKVAVVTGAAAGLGRAEALGLARLGATVVVNDVASALDASDVLDEIRAAGAKAVAVAGDISQRATADELVATAVG--LG 88 (306)
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCchhHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHHHH--hC
Confidence 467899999999999998888888899999887643 23222221 223211 1233332122 222223 24
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 89 ~iD~li~nAG~ 99 (306)
T PRK07792 89 GLDIVVNNAGI 99 (306)
T ss_pred CCCEEEECCCC
Confidence 69999999884
|
|
| >PRK12744 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.035 Score=47.69 Aligned_cols=81 Identities=15% Similarity=0.152 Sum_probs=48.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh----hhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYF-- 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~----~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~-- 219 (342)
.+.++||+|++|++|.++++.+...|++|+.++++. ++.+.+.+ ..+.. . .+|..+..++.+.+.+..
T Consensus 7 ~~k~vlItGa~~gIG~~~a~~l~~~G~~vv~i~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~ 86 (257)
T PRK12744 7 KGKVVLIAGGAKNLGGLIARDLAAQGAKAVAIHYNSAASKADAEETVAAVKAAGAKAVAFQADLTTAAAVEKLFDDAKAA 86 (257)
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCcEEEEecCCccchHHHHHHHHHHHHhCCcEEEEecCcCCHHHHHHHHHHHHHh
Confidence 357899999999999999999988899977665432 22222211 22332 1 234444323333333222
Q ss_pred CCCccEEEeCCCh
Q 019332 220 PEGIDIYFENVGG 232 (342)
Q Consensus 220 ~~~~d~vid~~g~ 232 (342)
.+.+|++++++|.
T Consensus 87 ~~~id~li~~ag~ 99 (257)
T PRK12744 87 FGRPDIAINTVGK 99 (257)
T ss_pred hCCCCEEEECCcc
Confidence 1368999999884
|
|
| >PTZ00098 phosphoethanolamine N-methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=96.12 E-value=0.046 Score=47.30 Aligned_cols=105 Identities=10% Similarity=0.165 Sum_probs=66.8
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCc
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
+....++.++.+||=.|. |.|..+..+++..+++|++++.+++-.+.+++.......+..... ++.+. ....+.+
T Consensus 44 ~l~~l~l~~~~~VLDiGc--G~G~~a~~la~~~~~~v~giD~s~~~~~~a~~~~~~~~~i~~~~~-D~~~~--~~~~~~F 118 (263)
T PTZ00098 44 ILSDIELNENSKVLDIGS--GLGGGCKYINEKYGAHVHGVDICEKMVNIAKLRNSDKNKIEFEAN-DILKK--DFPENTF 118 (263)
T ss_pred HHHhCCCCCCCEEEEEcC--CCChhhHHHHhhcCCEEEEEECCHHHHHHHHHHcCcCCceEEEEC-CcccC--CCCCCCe
Confidence 334567889999998884 456667777877789999999998877777733332111111111 21100 0112368
Q ss_pred cEEEeCC-----C--h--hhHHHHHHhhhhCCEEEEEce
Q 019332 224 DIYFENV-----G--G--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 224 d~vid~~-----g--~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
|+|+... . . ..+..+.+.|+|+|+++....
T Consensus 119 D~V~s~~~l~h~~~~d~~~~l~~i~r~LkPGG~lvi~d~ 157 (263)
T PTZ00098 119 DMIYSRDAILHLSYADKKKLFEKCYKWLKPNGILLITDY 157 (263)
T ss_pred EEEEEhhhHHhCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 9988521 1 1 356778899999999987654
|
|
| >TIGR01470 cysG_Nterm siroheme synthase, N-terminal domain | Back alignment and domain information |
|---|
Probab=96.11 E-value=0.061 Score=44.59 Aligned_cols=91 Identities=16% Similarity=0.142 Sum_probs=58.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.|.+|||.|+ |.+|..-++.+...|++|++++.... ....+. +.|--..+ ..+. . ...+ .++++|+-+.
T Consensus 8 ~gk~vlVvGg-G~va~rk~~~Ll~~ga~VtVvsp~~~~~l~~l~-~~~~i~~~-~~~~-~-~~dl-----~~~~lVi~at 77 (205)
T TIGR01470 8 EGRAVLVVGG-GDVALRKARLLLKAGAQLRVIAEELESELTLLA-EQGGITWL-ARCF-D-ADIL-----EGAFLVIAAT 77 (205)
T ss_pred CCCeEEEECc-CHHHHHHHHHHHHCCCEEEEEcCCCCHHHHHHH-HcCCEEEE-eCCC-C-HHHh-----CCcEEEEECC
Confidence 4679999997 99999999999999999998886543 223333 23321111 1111 1 1111 2589999999
Q ss_pred Chh-hHHHHHHhhhhCCEEEEEc
Q 019332 231 GGK-MLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 231 g~~-~~~~~~~~l~~~G~~v~~g 252 (342)
+.. .........+..|..++..
T Consensus 78 ~d~~ln~~i~~~a~~~~ilvn~~ 100 (205)
T TIGR01470 78 DDEELNRRVAHAARARGVPVNVV 100 (205)
T ss_pred CCHHHHHHHHHHHHHcCCEEEEC
Confidence 985 4455666666778777544
|
This model represents a subfamily of CysG N-terminal region-related sequences. All sequences in the seed alignment for this model are N-terminal regions of known or predicted siroheme synthases. The C-terminal region of each is uroporphyrin-III C-methyltransferase (EC 2.1.1.107), which catalyzes the first step committed to the biosynthesis of either siroheme or cobalamin (vitamin B12) rather than protoheme (heme). The region represented by this model completes the process of oxidation and iron insertion to yield siroheme. Siroheme is a cofactor for nitrite and sulfite reductases, so siroheme synthase is CysG of cysteine biosynthesis in some organisms. |
| >PRK12549 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.053 Score=47.42 Aligned_cols=71 Identities=21% Similarity=0.126 Sum_probs=49.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC----CeeEecCCchhHHHHHHHHCCCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF----DEAFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
.+.+|+|.|+ |++|.+++..+...|+ +|+++.++.+|.+.+.+.++. ..+.... ++.+.+ ..+|+|
T Consensus 126 ~~k~vlIlGa-GGaaraia~aL~~~G~~~I~I~nR~~~ka~~la~~l~~~~~~~~~~~~~---~~~~~~-----~~aDiV 196 (284)
T PRK12549 126 SLERVVQLGA-GGAGAAVAHALLTLGVERLTIFDVDPARAAALADELNARFPAARATAGS---DLAAAL-----AAADGL 196 (284)
T ss_pred cCCEEEEECC-cHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHHHHHHhhCCCeEEEecc---chHhhh-----CCCCEE
Confidence 4578999997 9999999999999998 899999998888766544432 1222111 222222 248999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++|..
T Consensus 197 InaTp 201 (284)
T PRK12549 197 VHATP 201 (284)
T ss_pred EECCc
Confidence 99953
|
|
| >PRK06947 glucose-1-dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=96.10 E-value=0.036 Score=47.32 Aligned_cols=79 Identities=18% Similarity=0.118 Sum_probs=48.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHC--CCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.++||+|++|++|...++.+...|++|+++. +++++.+.+.+ ..+.. .. .|..+..++.+.+.+.. .+.+|
T Consensus 3 k~ilItGas~giG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~id 82 (248)
T PRK06947 3 KVVLITGASRGIGRATAVLAAARGWSVGINYARDAAAAEETADAVRAAGGRACVVAGDVANEADVIAMFDAVQSAFGRLD 82 (248)
T ss_pred cEEEEeCCCCcHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEeccCCHHHHHHHHHHHHHhcCCCC
Confidence 4799999999999999988888899988765 44444333221 22321 11 23333313333333322 13699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++|.++|.
T Consensus 83 ~li~~ag~ 90 (248)
T PRK06947 83 ALVNNAGI 90 (248)
T ss_pred EEEECCcc
Confidence 99998873
|
|
| >PRK12550 shikimate 5-dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=96.07 E-value=0.054 Score=46.97 Aligned_cols=68 Identities=15% Similarity=0.119 Sum_probs=49.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
...+.+++|.|+ ||.+.+++..+...|+ +|+++.|+.+|.+.+.+.++.. +.+.+. ...+|+++|
T Consensus 119 ~~~~~~vlilGa-GGaarAi~~aL~~~g~~~i~i~nR~~~~a~~la~~~~~~----------~~~~~~---~~~~dlvIN 184 (272)
T PRK12550 119 VPPDLVVALRGS-GGMAKAVAAALRDAGFTDGTIVARNEKTGKALAELYGYE----------WRPDLG---GIEADILVN 184 (272)
T ss_pred CCCCCeEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhCCc----------chhhcc---cccCCEEEE
Confidence 445568999997 9999999998888998 7999999998887776444321 111111 124899999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
|..
T Consensus 185 aTp 187 (272)
T PRK12550 185 VTP 187 (272)
T ss_pred CCc
Confidence 876
|
|
| >PRK07066 3-hydroxybutyryl-CoA dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=96.06 E-value=0.31 Score=43.32 Aligned_cols=39 Identities=18% Similarity=0.020 Sum_probs=33.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHH
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLL 193 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~ 193 (342)
.+|.|+|+ |.+|...++.+...|.+|++.+.+++..+.+
T Consensus 8 ~~VaVIGa-G~MG~giA~~~a~aG~~V~l~D~~~~~~~~~ 46 (321)
T PRK07066 8 KTFAAIGS-GVIGSGWVARALAHGLDVVAWDPAPGAEAAL 46 (321)
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEeCCHHHHHHH
Confidence 57999997 9999988888888899999999988765543
|
|
| >PF05368 NmrA: NmrA-like family; InterPro: IPR008030 NmrA is a negative transcriptional regulator involved in the post-translational modification of the transcription factor AreA | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.047 Score=46.18 Aligned_cols=88 Identities=18% Similarity=0.266 Sum_probs=59.0
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeCCC-
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFENVG- 231 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~~g- 231 (342)
|+|+||+|.+|...++.+...+.+|.+.+|+..+ .+.++ ..|+..+ .|+.+ .+.+.+... |+|.||.+.+
T Consensus 1 I~V~GatG~~G~~v~~~L~~~~~~V~~l~R~~~~~~~~~l~-~~g~~vv~~d~~~----~~~l~~al~-g~d~v~~~~~~ 74 (233)
T PF05368_consen 1 ILVTGATGNQGRSVVRALLSAGFSVRALVRDPSSDRAQQLQ-ALGAEVVEADYDD----PESLVAALK-GVDAVFSVTPP 74 (233)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTGCEEEEESSSHHHHHHHHH-HTTTEEEES-TT-----HHHHHHHHT-TCSEEEEESSC
T ss_pred CEEECCccHHHHHHHHHHHhCCCCcEEEEeccchhhhhhhh-cccceEeecccCC----HHHHHHHHc-CCceEEeecCc
Confidence 7999999999999999998888899999998643 44555 6787432 23333 334444433 5999999888
Q ss_pred --h---hhHHHHHHhhhhCC--EEE
Q 019332 232 --G---KMLDAVLLNMKIHG--RIA 249 (342)
Q Consensus 232 --~---~~~~~~~~~l~~~G--~~v 249 (342)
. +......++.+.-| +++
T Consensus 75 ~~~~~~~~~~~li~Aa~~agVk~~v 99 (233)
T PF05368_consen 75 SHPSELEQQKNLIDAAKAAGVKHFV 99 (233)
T ss_dssp SCCCHHHHHHHHHHHHHHHT-SEEE
T ss_pred chhhhhhhhhhHHHhhhccccceEE
Confidence 2 23344555555544 454
|
NmrA is part of a system controlling nitrogen metabolite repression in fungi []. This family only contains a few sequences as iteration results in significant matches to other Rossmann fold families.; PDB: 2ZCV_A 2ZCU_A 2R6J_B 3C3X_A 2QZZ_B 2QYS_A 2QX7_A 2QW8_A 2R2G_B 3E5M_B .... |
| >COG2227 UbiG 2-polyprenyl-3-methyl-5-hydroxy-6-metoxy-1,4-benzoquinol methylase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=96.04 E-value=0.074 Score=44.43 Aligned_cols=94 Identities=23% Similarity=0.277 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
-+|-+||=.|..| |+...-+|+ .|++|++++-+++-.+.++ ..... --+||... ..+++.... +.||+|+.
T Consensus 58 l~g~~vLDvGCGg--G~Lse~mAr-~Ga~VtgiD~se~~I~~Ak-~ha~e~gv~i~y~~~--~~edl~~~~-~~FDvV~c 130 (243)
T COG2227 58 LPGLRVLDVGCGG--GILSEPLAR-LGASVTGIDASEKPIEVAK-LHALESGVNIDYRQA--TVEDLASAG-GQFDVVTC 130 (243)
T ss_pred CCCCeEEEecCCc--cHhhHHHHH-CCCeeEEecCChHHHHHHH-Hhhhhccccccchhh--hHHHHHhcC-CCccEEEE
Confidence 3778899888644 455555554 5899999999998888776 32221 12567653 344443322 47999975
Q ss_pred -----CCCh--hhHHHHHHhhhhCCEEEEE
Q 019332 229 -----NVGG--KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 229 -----~~g~--~~~~~~~~~l~~~G~~v~~ 251 (342)
-+.. ..+..+.++++|+|.++..
T Consensus 131 mEVlEHv~dp~~~~~~c~~lvkP~G~lf~S 160 (243)
T COG2227 131 MEVLEHVPDPESFLRACAKLVKPGGILFLS 160 (243)
T ss_pred hhHHHccCCHHHHHHHHHHHcCCCcEEEEe
Confidence 2222 3567899999999997753
|
|
| >PRK14175 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=96.01 E-value=0.09 Score=45.67 Aligned_cols=77 Identities=21% Similarity=0.183 Sum_probs=58.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|+|.|.+.-+|.-+++++...|++|++..+... ++.+.+++ +|+++.++
T Consensus 156 l~Gk~vvVIGrs~~VG~pla~lL~~~gatVtv~~s~t~---------------------~l~~~~~~-----ADIVIsAv 209 (286)
T PRK14175 156 LEGKNAVVIGRSHIVGQPVSKLLLQKNASVTILHSRSK---------------------DMASYLKD-----ADVIVSAV 209 (286)
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHHHhh-----CCEEEECC
Confidence 47889999998677999999999999999998775321 23333332 89999999
Q ss_pred Chh-hHHHHHHhhhhCCEEEEEceec
Q 019332 231 GGK-MLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 231 g~~-~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|.. .+.. +.++++..++.+|...
T Consensus 210 g~p~~i~~--~~vk~gavVIDvGi~~ 233 (286)
T PRK14175 210 GKPGLVTK--DVVKEGAVIIDVGNTP 233 (286)
T ss_pred CCCcccCH--HHcCCCcEEEEcCCCc
Confidence 985 4443 4688888888988743
|
|
| >PLN02986 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=96.00 E-value=0.037 Score=49.36 Aligned_cols=40 Identities=20% Similarity=0.259 Sum_probs=34.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~ 191 (342)
.|.+|||+||+|.+|..+++.+...|.+|+++.++.++.+
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~ 43 (322)
T PLN02986 4 GGKLVCVTGASGYIASWIVKLLLLRGYTVKATVRDLTDRK 43 (322)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCCcchH
Confidence 4679999999999999999988888999999888766443
|
|
| >PRK09730 putative NAD(P)-binding oxidoreductase; Provisional | Back alignment and domain information |
|---|
Probab=95.99 E-value=0.046 Score=46.51 Aligned_cols=79 Identities=13% Similarity=0.113 Sum_probs=49.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHH---HcCCC---eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.++||+|++|++|.+.++.+...|++|+++ .+++++.+.... ..+.. ...|..+...+.+.+.+.. .+.+|
T Consensus 2 ~~~lItGa~g~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~i~~~~~~~~~~~~~id 81 (247)
T PRK09730 2 AIALVTGGSRGIGRATALLLAQEGYTVAVNYQQNLHAAQEVVNLITQAGGKAFVLQADISDENQVVAMFTAIDQHDEPLA 81 (247)
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhCCCeEEEEEccCCCHHHHHHHHHHHHHhCCCCC
Confidence 379999999999999999888889998765 455544332221 22321 1234444423333333332 23699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++.+.|.
T Consensus 82 ~vi~~ag~ 89 (247)
T PRK09730 82 ALVNNAGI 89 (247)
T ss_pred EEEECCCC
Confidence 99999984
|
|
| >PRK14982 acyl-ACP reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.04 Score=49.18 Aligned_cols=95 Identities=20% Similarity=0.215 Sum_probs=62.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHH-HcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 151 KQGECVFISAASGAVGQLVGQFAK-LLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~-~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
-.+.+|+|+||+|.+|..+++.+. ..|. +++.+.++.++...+.++++...+. ++.+.+ . .+|+|+-
T Consensus 153 l~~k~VLVtGAtG~IGs~lar~L~~~~gv~~lilv~R~~~rl~~La~el~~~~i~------~l~~~l----~-~aDiVv~ 221 (340)
T PRK14982 153 LSKATVAVVGATGDIGSAVCRWLDAKTGVAELLLVARQQERLQELQAELGGGKIL------SLEEAL----P-EADIVVW 221 (340)
T ss_pred cCCCEEEEEccChHHHHHHHHHHHhhCCCCEEEEEcCCHHHHHHHHHHhccccHH------hHHHHH----c-cCCEEEE
Confidence 356899999999999998887775 4565 8999998888777666444321111 222222 2 4899999
Q ss_pred CCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 229 NVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 229 ~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+.+. ..+..--..+++.-.+++++.+.+
T Consensus 222 ~ts~~~~~~I~~~~l~~~~~viDiAvPRD 250 (340)
T PRK14982 222 VASMPKGVEIDPETLKKPCLMIDGGYPKN 250 (340)
T ss_pred CCcCCcCCcCCHHHhCCCeEEEEecCCCC
Confidence 9887 332122235566667778877654
|
|
| >PLN02896 cinnamyl-alcohol dehydrogenase | Back alignment and domain information |
|---|
Probab=95.98 E-value=0.062 Score=48.67 Aligned_cols=77 Identities=19% Similarity=0.233 Sum_probs=50.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--CCC-eeE--ecCCchhHHHHHHHHCCCCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--GFD-EAF--NYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
..+.+|||+|++|.+|..+++.+...|++|+++.++.++.+.+...+ +.. .++ |..+. +.+.+... ++|.
T Consensus 8 ~~~~~vLVtG~~GfIG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~~~----~~~~~~~~-~~d~ 82 (353)
T PLN02896 8 SATGTYCVTGATGYIGSWLVKLLLQRGYTVHATLRDPAKSLHLLSKWKEGDRLRLFRADLQEE----GSFDEAVK-GCDG 82 (353)
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHhhccCCeEEEEECCCCCH----HHHHHHHc-CCCE
Confidence 45678999999999999999998888999999988776554333122 111 122 22222 22333322 4899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
||.+++.
T Consensus 83 Vih~A~~ 89 (353)
T PLN02896 83 VFHVAAS 89 (353)
T ss_pred EEECCcc
Confidence 9998873
|
|
| >PRK06123 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.96 E-value=0.047 Score=46.54 Aligned_cols=80 Identities=19% Similarity=0.204 Sum_probs=48.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
+.++||+|++|++|...++.....|++|+... +++++.+.+.. ..+.. . ..|..+...+.+.+.+... +.+
T Consensus 2 ~~~~lVtG~~~~iG~~~a~~l~~~G~~vv~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i 81 (248)
T PRK06123 2 RKVMIITGASRGIGAATALLAAERGYAVCLNYLRNRDAAEAVVQAIRRQGGEALAVAADVADEADVLRLFEAVDRELGRL 81 (248)
T ss_pred CCEEEEECCCchHHHHHHHHHHHCCCeEEEecCCCHHHHHHHHHHHHhCCCcEEEEEeccCCHHHHHHHHHHHHHHhCCC
Confidence 35799999999999998888888899887765 34443332221 23332 1 1344443233333333221 368
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|+++.++|.
T Consensus 82 d~li~~ag~ 90 (248)
T PRK06123 82 DALVNNAGI 90 (248)
T ss_pred CEEEECCCC
Confidence 999998884
|
|
| >PRK06300 enoyl-(acyl carrier protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.95 E-value=0.13 Score=45.31 Aligned_cols=33 Identities=15% Similarity=0.223 Sum_probs=29.6
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEe
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSA 184 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~ 184 (342)
.|.++||+|++ +|||.+.++.+...|++|++..
T Consensus 7 ~gk~alITGa~~~~GIG~a~A~~la~~Ga~Vvv~~ 41 (299)
T PRK06300 7 TGKIAFIAGIGDDQGYGWGIAKALAEAGATILVGT 41 (299)
T ss_pred CCCEEEEeCCCCCCCHHHHHHHHHHHCCCEEEEEe
Confidence 57899999995 8999999999999999999865
|
|
| >PF01370 Epimerase: NAD dependent epimerase/dehydratase family; InterPro: IPR001509 This family of proteins utilise NAD as a cofactor | Back alignment and domain information |
|---|
Probab=95.94 E-value=0.049 Score=45.91 Aligned_cols=74 Identities=16% Similarity=0.218 Sum_probs=51.5
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
|||+||+|-+|..++..+...|.+|+...++..+......+.... ...|..+...+.+.++.. .+|.||.+++.
T Consensus 1 IlI~GatG~iG~~l~~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~dl~~~~~~~~~~~~~---~~d~vi~~a~~ 75 (236)
T PF01370_consen 1 ILITGATGFIGSALVRQLLKKGHEVIVLSRSSNSESFEEKKLNVEFVIGDLTDKEQLEKLLEKA---NIDVVIHLAAF 75 (236)
T ss_dssp EEEETTTSHHHHHHHHHHHHTTTEEEEEESCSTGGHHHHHHTTEEEEESETTSHHHHHHHHHHH---TESEEEEEBSS
T ss_pred EEEEccCCHHHHHHHHHHHHcCCccccccccccccccccccceEEEEEeecccccccccccccc---CceEEEEeecc
Confidence 799999999999999999999999998888777655444223332 234555441333333332 58999999885
|
The proteins in this family use nucleotide-sugar substrates for a variety of chemical reactions []. It contains the NAD(P)- binding domain (IPR016040 from INTERPRO) which is a commonly found domain with a core Rossmann-type fold. One of the best studied of these proteins is UDP-galactose 4-epimerase which catalyses the conversion of UDP-galactose to UDP-glucose during galactose metabolism [, ].; GO: 0003824 catalytic activity, 0050662 coenzyme binding, 0044237 cellular metabolic process; PDB: 2NNL_D 3C1T_B 3BXX_C 2IOD_C 2X4G_A 2Q1W_B 3SLG_B 1R66_A 1R6D_A 1KEU_B .... |
| >PLN02989 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.037 Score=49.42 Aligned_cols=75 Identities=15% Similarity=0.263 Sum_probs=48.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC---CeeE--ecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF---DEAF--NYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~---~~v~--~~~~~~~~~~~i~~~~~~~~ 223 (342)
.+.++||+||+|.+|..++..+...|++|+++.++.++.+.....+ +. ..++ |..+. + .+.+... ++
T Consensus 4 ~~k~vlVtG~~G~IG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~~-~~ 78 (325)
T PLN02989 4 GGKVVCVTGASGYIASWIVKLLLFRGYTINATVRDPKDRKKTDHLLALDGAKERLKLFKADLLDE-G---SFELAID-GC 78 (325)
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEEcCCcchhhHHHHHhccCCCCceEEEeCCCCCc-h---HHHHHHc-CC
Confidence 4679999999999999999988888999998887765433222111 11 1122 33333 2 2222222 48
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|+++.++|
T Consensus 79 d~vih~A~ 86 (325)
T PLN02989 79 ETVFHTAS 86 (325)
T ss_pred CEEEEeCC
Confidence 99999987
|
|
| >TIGR01500 sepiapter_red sepiapterin reductase | Back alignment and domain information |
|---|
Probab=95.93 E-value=0.052 Score=46.66 Aligned_cols=40 Identities=28% Similarity=0.339 Sum_probs=31.9
Q ss_pred EEEEecCCcHHHHHHHHHH-HH---cCCEEEEEeCChhhHHHHH
Q 019332 155 CVFISAASGAVGQLVGQFA-KL---LGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la-~~---~ga~Vi~~~~s~~~~~~~~ 194 (342)
.+||+|+++++|.+++..+ +. .|++|+.+.+++++.+.+.
T Consensus 2 ~vlItGas~GIG~~~a~~la~~~~~~g~~V~~~~r~~~~~~~~~ 45 (256)
T TIGR01500 2 VCLVTGASRGFGRTIAQELAKCLKSPGSVLVLSARNDEALRQLK 45 (256)
T ss_pred EEEEecCCCchHHHHHHHHHHhhccCCcEEEEEEcCHHHHHHHH
Confidence 5899999999999766544 42 6999999999888766554
|
This model describes sepiapterin reductase, a member of the short chain dehydrogenase/reductase family. The enzyme catalyzes the last step in the biosynthesis of tetrahydrobiopterin. A similar enzyme in Bacillus cereus was isolated for its ability to convert benzil to (S)-benzoin, a property sepiapterin reductase also shares. Cutoff scores for this model are set such that benzil reductase scores between trusted and noise cutoffs. |
| >PLN02653 GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.024 Score=51.07 Aligned_cols=36 Identities=19% Similarity=0.274 Sum_probs=32.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
+.+|||+||+|.+|...++.+...|++|++++++..
T Consensus 6 ~~~vlVTGatGfiG~~l~~~L~~~G~~V~~~~r~~~ 41 (340)
T PLN02653 6 RKVALITGITGQDGSYLTEFLLSKGYEVHGIIRRSS 41 (340)
T ss_pred CCEEEEECCCCccHHHHHHHHHHCCCEEEEEecccc
Confidence 578999999999999999999989999999887543
|
|
| >cd01075 NAD_bind_Leu_Phe_Val_DH NAD(P) binding domain of leucine dehydrogenase, phenylalanine dehydrogenase, and valine dehydrogenase | Back alignment and domain information |
|---|
Probab=95.87 E-value=0.075 Score=43.88 Aligned_cols=48 Identities=17% Similarity=0.241 Sum_probs=40.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF 199 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~ 199 (342)
-.|.+++|+|. |.+|..+++.+...|++|++++++.++.+.+.+.+|+
T Consensus 26 l~gk~v~I~G~-G~vG~~~A~~L~~~G~~Vvv~D~~~~~~~~~~~~~g~ 73 (200)
T cd01075 26 LEGKTVAVQGL-GKVGYKLAEHLLEEGAKLIVADINEEAVARAAELFGA 73 (200)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHcCC
Confidence 35689999997 8999999999999999999999888877777645565
|
Amino acid dehydrogenase (DH) is a widely distributed family of enzymes that catalyzes the oxidative deamination of an amino acid to its keto acid and ammonia with concomitant reduction of NADP+. For example, leucine DH catalyzes the reversible oxidative deamination of L-leucine and several other straight or branched chain amino acids to the corresponding 2-oxoacid derivative. Amino acid DH -like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydropholate DH/cyclohydrolase, Shikimate DH-like proteins, malate oxidoreductases, and glutamyl tRNA reductase. Amino acid DHs catalyze the deamination of amino acids to keto acids with NAD(P)+ as a cofactor. The NAD(P)-binding Rossmann fold superfamily inc |
| >PRK12824 acetoacetyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.85 E-value=0.057 Score=45.84 Aligned_cols=79 Identities=16% Similarity=0.190 Sum_probs=48.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHcC---CC-e--eEecCCchhHHHHHHHHC--CCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKNKFG---FD-E--AFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~~~g---~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.++||+|++|++|..+++.+...|++|++++++.+ ......+++. .. . ..|..+...+.+.+.+.. .+.+|
T Consensus 3 k~vlItG~s~~iG~~la~~l~~~g~~vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~~~id 82 (245)
T PRK12824 3 KIALVTGAKRGIGSAIARELLNDGYRVIATYFSGNDCAKDWFEEYGFTEDQVRLKELDVTDTEECAEALAEIEEEEGPVD 82 (245)
T ss_pred CEEEEeCCCchHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHHHhhccCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCCC
Confidence 47999999999999988888888999999998743 1111111222 11 1 124443312333333221 13599
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+++.+.|.
T Consensus 83 ~vi~~ag~ 90 (245)
T PRK12824 83 ILVNNAGI 90 (245)
T ss_pred EEEECCCC
Confidence 99998873
|
|
| >PRK11207 tellurite resistance protein TehB; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.038 Score=45.57 Aligned_cols=98 Identities=14% Similarity=0.018 Sum_probs=61.1
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC-CCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF-PEG 222 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~-~~~ 222 (342)
..+..++.+||-.| .|.|..+..+++. |.+|++++.|++-.+.+++ ..+... ++.... ++. +.. .+.
T Consensus 25 ~l~~~~~~~vLDiG--cG~G~~a~~La~~-g~~V~gvD~S~~~i~~a~~~~~~~~~~~-v~~~~~-d~~----~~~~~~~ 95 (197)
T PRK11207 25 AVKVVKPGKTLDLG--CGNGRNSLYLAAN-GFDVTAWDKNPMSIANLERIKAAENLDN-LHTAVV-DLN----NLTFDGE 95 (197)
T ss_pred hcccCCCCcEEEEC--CCCCHHHHHHHHC-CCEEEEEeCCHHHHHHHHHHHHHcCCCc-ceEEec-Chh----hCCcCCC
Confidence 33455678899998 4568888888875 8899999999876555542 222221 111111 221 111 236
Q ss_pred ccEEEeCCCh---------hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFENVGG---------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+|+....- ..+..+.+.|+++|.++.+..
T Consensus 96 fD~I~~~~~~~~~~~~~~~~~l~~i~~~LkpgG~~~~~~~ 135 (197)
T PRK11207 96 YDFILSTVVLMFLEAKTIPGLIANMQRCTKPGGYNLIVAA 135 (197)
T ss_pred cCEEEEecchhhCCHHHHHHHHHHHHHHcCCCcEEEEEEE
Confidence 9999865331 346678889999999765443
|
|
| >PLN03075 nicotianamine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.84 E-value=0.07 Score=46.53 Aligned_cols=97 Identities=11% Similarity=0.059 Sum_probs=66.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHc----CCCeeEecCCchhHHHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKF----GFDEAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
+.++|+-.| +|+.++.++.+++.. +.+++.++.+++..+.+++.+ |....+.+... |..+.... .+.+|+
T Consensus 123 ~p~~VldIG-cGpgpltaiilaa~~~p~~~~~giD~d~~ai~~Ar~~~~~~~gL~~rV~F~~~-Da~~~~~~--l~~FDl 198 (296)
T PLN03075 123 VPTKVAFVG-SGPLPLTSIVLAKHHLPTTSFHNFDIDPSANDVARRLVSSDPDLSKRMFFHTA-DVMDVTES--LKEYDV 198 (296)
T ss_pred CCCEEEEEC-CCCcHHHHHHHHHhcCCCCEEEEEeCCHHHHHHHHHHhhhccCccCCcEEEEC-chhhcccc--cCCcCE
Confidence 778999999 588999888888644 458999999998887777433 22222333333 33332111 136999
Q ss_pred EEeCC------Ch--hhHHHHHHhhhhCCEEEEEc
Q 019332 226 YFENV------GG--KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 226 vid~~------g~--~~~~~~~~~l~~~G~~v~~g 252 (342)
||-.+ .. ..+....+.|++||.++.-.
T Consensus 199 VF~~ALi~~dk~~k~~vL~~l~~~LkPGG~Lvlr~ 233 (296)
T PLN03075 199 VFLAALVGMDKEEKVKVIEHLGKHMAPGALLMLRS 233 (296)
T ss_pred EEEecccccccccHHHHHHHHHHhcCCCcEEEEec
Confidence 98764 22 46788999999999987543
|
|
| >KOG1207 consensus Diacetyl reductase/L-xylulose reductase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.046 Score=43.11 Aligned_cols=43 Identities=19% Similarity=0.242 Sum_probs=38.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
.|..|+++|+.-|||...++-+...|++|++++++++.+..+-
T Consensus 6 aG~~vlvTgagaGIG~~~v~~La~aGA~ViAvaR~~a~L~sLV 48 (245)
T KOG1207|consen 6 AGVIVLVTGAGAGIGKEIVLSLAKAGAQVIAVARNEANLLSLV 48 (245)
T ss_pred cceEEEeecccccccHHHHHHHHhcCCEEEEEecCHHHHHHHH
Confidence 5778999999889999999999999999999999998877665
|
|
| >KOG1199 consensus Short-chain alcohol dehydrogenase/3-hydroxyacyl-CoA dehydrogenase [Secondary metabolites biosynthesis, transport and catabolism] | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.052 Score=42.66 Aligned_cols=82 Identities=15% Similarity=0.157 Sum_probs=57.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc---hhHHHHHHHHCC--CCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE---PDLNEALKRYFP--EGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~---~~~~~~i~~~~~--~~~d~ 225 (342)
.+|-.-||+|+++++|.+++..+...|+.|+..+-..++-+...+++|-.-++...+- .+....+..... |..|.
T Consensus 7 ~kglvalvtggasglg~ataerlakqgasv~lldlp~skg~~vakelg~~~vf~padvtsekdv~aala~ak~kfgrld~ 86 (260)
T KOG1199|consen 7 TKGLVALVTGGASGLGKATAERLAKQGASVALLDLPQSKGADVAKELGGKVVFTPADVTSEKDVRAALAKAKAKFGRLDA 86 (260)
T ss_pred hcCeeEEeecCcccccHHHHHHHHhcCceEEEEeCCcccchHHHHHhCCceEEeccccCcHHHHHHHHHHHHhhccceee
Confidence 4556679999999999999999999999998888766655444448997655543321 144444433332 26899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
..+|.|-
T Consensus 87 ~vncagi 93 (260)
T KOG1199|consen 87 LVNCAGI 93 (260)
T ss_pred eeeccce
Confidence 9999995
|
|
| >PF13241 NAD_binding_7: Putative NAD(P)-binding; PDB: 3DFZ_B 1PJT_A 1PJS_A 1PJQ_A 1KYQ_B | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.015 Score=42.35 Aligned_cols=86 Identities=16% Similarity=0.289 Sum_probs=56.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|||.|+ |.+|..-++.+...|++|++++... +..+ +.-. + ... .+.+. . .++++|+-+.+
T Consensus 6 ~~~~vlVvGg-G~va~~k~~~Ll~~gA~v~vis~~~---~~~~---~~i~-~--~~~-~~~~~----l-~~~~lV~~at~ 69 (103)
T PF13241_consen 6 KGKRVLVVGG-GPVAARKARLLLEAGAKVTVISPEI---EFSE---GLIQ-L--IRR-EFEED----L-DGADLVFAATD 69 (103)
T ss_dssp TT-EEEEEEE-SHHHHHHHHHHCCCTBEEEEEESSE---HHHH---TSCE-E--EES-S-GGG----C-TTESEEEE-SS
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCch---hhhh---hHHH-H--Hhh-hHHHH----H-hhheEEEecCC
Confidence 4678999997 9999999999999999999999775 2222 2111 1 111 22111 1 25999999998
Q ss_pred hhhHH-HHHHhhhhCCEEEEEce
Q 019332 232 GKMLD-AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~~~~~-~~~~~l~~~G~~v~~g~ 253 (342)
.+.++ ......+..|.++.+..
T Consensus 70 d~~~n~~i~~~a~~~~i~vn~~D 92 (103)
T PF13241_consen 70 DPELNEAIYADARARGILVNVVD 92 (103)
T ss_dssp -HHHHHHHHHHHHHTTSEEEETT
T ss_pred CHHHHHHHHHHHhhCCEEEEECC
Confidence 85444 55556666899888765
|
|
| >PRK13656 trans-2-enoyl-CoA reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.83 E-value=0.065 Score=48.45 Aligned_cols=80 Identities=15% Similarity=0.155 Sum_probs=49.1
Q ss_pred CCCCEEEEecCCcHHHHH--HHHHHHHcCCEEEEEeCChh--h-------------H-HHHHHHcCCC-eeE--ecCCch
Q 019332 151 KQGECVFISAASGAVGQL--VGQFAKLLGCYVVGSAGSKD--K-------------I-DLLKNKFGFD-EAF--NYKEEP 209 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~--ai~la~~~ga~Vi~~~~s~~--~-------------~-~~~~~~~g~~-~v~--~~~~~~ 209 (342)
..+.++||+|+++++|++ .++.+ ..|++|+++....+ + . +.++ +.|.. ..+ |-.+..
T Consensus 39 ~ggK~aLVTGaSsGIGlA~~IA~al-~~GA~Vi~v~~~~~~~~~~~~tagwy~~~a~~~~a~-~~G~~a~~i~~DVss~E 116 (398)
T PRK13656 39 NGPKKVLVIGASSGYGLASRIAAAF-GAGADTLGVFFEKPGTEKKTGTAGWYNSAAFDKFAK-AAGLYAKSINGDAFSDE 116 (398)
T ss_pred CCCCEEEEECCCchHhHHHHHHHHH-HcCCeEEEEecCcchhhhcccccccchHHHHHHHHH-hcCCceEEEEcCCCCHH
Confidence 456799999999999999 45555 78999888874221 1 1 2333 55642 222 333321
Q ss_pred h---HHHHHHHHCCCCccEEEeCCChh
Q 019332 210 D---LNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 210 ~---~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
. +.+.+++.. |++|+++++++..
T Consensus 117 ~v~~lie~I~e~~-G~IDiLVnSaA~~ 142 (398)
T PRK13656 117 IKQKVIELIKQDL-GQVDLVVYSLASP 142 (398)
T ss_pred HHHHHHHHHHHhc-CCCCEEEECCccC
Confidence 2 333344433 4699999999863
|
|
| >PRK12827 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.80 E-value=0.055 Score=46.04 Aligned_cols=80 Identities=21% Similarity=0.212 Sum_probs=48.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC----hhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--C
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----KDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--P 220 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s----~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~ 220 (342)
+.++||+||+|++|...++.+...|++|+++.+. .++.+.+.++ .+.. . ..|..+...+.+.+.+.. .
T Consensus 6 ~~~ilItGasg~iG~~la~~l~~~g~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~ 85 (249)
T PRK12827 6 SRRVLITGGSGGLGRAIAVRLAADGADVIVLDIHPMRGRAEADAVAAGIEAAGGKALGLAFDVRDFAATRAALDAGVEEF 85 (249)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCeEEEEcCcccccHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5689999999999999888888889999886542 3333322212 2221 1 124333312333332221 1
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+++|.+|.++|.
T Consensus 86 ~~~d~vi~~ag~ 97 (249)
T PRK12827 86 GRLDILVNNAGI 97 (249)
T ss_pred CCCCEEEECCCC
Confidence 369999999884
|
|
| >COG0373 HemA Glutamyl-tRNA reductase [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.24 Score=45.28 Aligned_cols=96 Identities=22% Similarity=0.278 Sum_probs=65.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-.+.++||+|| |-+|..++..+...|. +|++.-|+.+|...+.+++|+ .++.++ ++.+.+. .+|+||-+
T Consensus 176 L~~~~vlvIGA-Gem~~lva~~L~~~g~~~i~IaNRT~erA~~La~~~~~-~~~~l~---el~~~l~-----~~DvViss 245 (414)
T COG0373 176 LKDKKVLVIGA-GEMGELVAKHLAEKGVKKITIANRTLERAEELAKKLGA-EAVALE---ELLEALA-----EADVVISS 245 (414)
T ss_pred cccCeEEEEcc-cHHHHHHHHHHHhCCCCEEEEEcCCHHHHHHHHHHhCC-eeecHH---HHHHhhh-----hCCEEEEe
Confidence 36688999997 9999999998888897 888888888888776668995 333332 2222332 38999999
Q ss_pred CChhh----HHHHHHhhhhCC--EEEEEceecc
Q 019332 230 VGGKM----LDAVLLNMKIHG--RIAVCGMISQ 256 (342)
Q Consensus 230 ~g~~~----~~~~~~~l~~~G--~~v~~g~~~~ 256 (342)
.|.+. -....+.++..- -+++++.+.+
T Consensus 246 Tsa~~~ii~~~~ve~a~~~r~~~livDiavPRd 278 (414)
T COG0373 246 TSAPHPIITREMVERALKIRKRLLIVDIAVPRD 278 (414)
T ss_pred cCCCccccCHHHHHHHHhcccCeEEEEecCCCC
Confidence 99742 234445555443 3566666544
|
|
| >PRK06718 precorrin-2 dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.78 E-value=0.11 Score=42.93 Aligned_cols=91 Identities=10% Similarity=-0.022 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.|.+|||.|+ |.+|...++.+...|++|+++.....+ ...+. ..+. -.+... .+.+. .-.++|+||-|.
T Consensus 9 ~~k~vLVIGg-G~va~~ka~~Ll~~ga~V~VIs~~~~~~l~~l~-~~~~-i~~~~~---~~~~~----~l~~adlViaaT 78 (202)
T PRK06718 9 SNKRVVIVGG-GKVAGRRAITLLKYGAHIVVISPELTENLVKLV-EEGK-IRWKQK---EFEPS----DIVDAFLVIAAT 78 (202)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEcCCCCHHHHHHH-hCCC-EEEEec---CCChh----hcCCceEEEEcC
Confidence 4678999997 999999888888889999988754322 12221 1121 111111 11111 012589999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEc
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g 252 (342)
+.+..+..+...+..+.+++..
T Consensus 79 ~d~elN~~i~~~a~~~~lvn~~ 100 (202)
T PRK06718 79 NDPRVNEQVKEDLPENALFNVI 100 (202)
T ss_pred CCHHHHHHHHHHHHhCCcEEEC
Confidence 9876665555544556666553
|
|
| >PF08704 GCD14: tRNA methyltransferase complex GCD14 subunit; InterPro: IPR014816 GCD14 is a subunit of the tRNA methyltransferase complex and is required for 1-methyladenosine modification and maturation of initiator methionyl-tRNA [] | Back alignment and domain information |
|---|
Probab=95.77 E-value=0.038 Score=47.02 Aligned_cols=105 Identities=16% Similarity=0.216 Sum_probs=66.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHH-HHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLN-EALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~-~~i~~~~ 219 (342)
...++.||++|+=-| +|.|.++..+++..|- +|+....++++.+.+++. +|....+..... |.. +...+..
T Consensus 34 ~~l~i~pG~~VlEaG--tGSG~lt~~l~r~v~p~G~v~t~E~~~~~~~~A~~n~~~~gl~~~v~~~~~-Dv~~~g~~~~~ 110 (247)
T PF08704_consen 34 MRLDIRPGSRVLEAG--TGSGSLTHALARAVGPTGHVYTYEFREDRAEKARKNFERHGLDDNVTVHHR-DVCEEGFDEEL 110 (247)
T ss_dssp HHTT--TT-EEEEE----TTSHHHHHHHHHHTTTSEEEEEESSHHHHHHHHHHHHHTTCCTTEEEEES--GGCG--STT-
T ss_pred HHcCCCCCCEEEEec--CCcHHHHHHHHHHhCCCeEEEccccCHHHHHHHHHHHHHcCCCCCceeEec-ceecccccccc
Confidence 447899999998877 5778888889987764 999999999988777653 455322211111 221 1111111
Q ss_pred CCCccEE-EeCCCh-hhHHHHHHhh-hhCCEEEEEce
Q 019332 220 PEGIDIY-FENVGG-KMLDAVLLNM-KIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~v-id~~g~-~~~~~~~~~l-~~~G~~v~~g~ 253 (342)
.+.+|.| +|--.. ..+..+.++| +++|+++++..
T Consensus 111 ~~~~DavfLDlp~Pw~~i~~~~~~L~~~gG~i~~fsP 147 (247)
T PF08704_consen 111 ESDFDAVFLDLPDPWEAIPHAKRALKKPGGRICCFSP 147 (247)
T ss_dssp TTSEEEEEEESSSGGGGHHHHHHHE-EEEEEEEEEES
T ss_pred cCcccEEEEeCCCHHHHHHHHHHHHhcCCceEEEECC
Confidence 1257765 666666 7899999999 89999998865
|
; GO: 0016429 tRNA (adenine-N1-)-methyltransferase activity, 0030488 tRNA methylation; PDB: 2YVL_C 1YB2_A 2B25_B 1O54_A 2PWY_B 1I9G_A 3LGA_B 3LHD_C 3MB5_A. |
| >PRK12859 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.067 Score=45.98 Aligned_cols=33 Identities=9% Similarity=0.147 Sum_probs=28.9
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEe
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSA 184 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~ 184 (342)
++.++||+|++ +++|.+.+..+...|++|++++
T Consensus 5 ~~k~vlVtGas~~~giG~~~a~~l~~~G~~vi~~~ 39 (256)
T PRK12859 5 KNKVAVVTGVSRLDGIGAAICKELAEAGADIFFTY 39 (256)
T ss_pred CCcEEEEECCCCCCChHHHHHHHHHHCCCeEEEEe
Confidence 46799999997 4899999988888999998875
|
|
| >PRK01581 speE spermidine synthase; Validated | Back alignment and domain information |
|---|
Probab=95.72 E-value=0.16 Score=45.63 Aligned_cols=96 Identities=15% Similarity=0.101 Sum_probs=61.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcC--------C--CeeEecCCchhHHHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFG--------F--DEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g--------~--~~v~~~~~~~~~~~~i~~~~~ 220 (342)
...+|||.| ||.|.++..+++..+. +|+++..+++-.+.++ ++. . +.-+...-. |..+.+++ ..
T Consensus 150 ~PkrVLIIG--gGdG~tlrelLk~~~v~~It~VEIDpeVIelAr-~~~~L~~~~~~~~~DpRV~vvi~-Da~~fL~~-~~ 224 (374)
T PRK01581 150 DPKRVLILG--GGDGLALREVLKYETVLHVDLVDLDGSMINMAR-NVPELVSLNKSAFFDNRVNVHVC-DAKEFLSS-PS 224 (374)
T ss_pred CCCEEEEEC--CCHHHHHHHHHhcCCCCeEEEEeCCHHHHHHHH-hccccchhccccCCCCceEEEEC-cHHHHHHh-cC
Confidence 346899999 4667777788877654 8999999988778777 421 1 111111111 33444443 33
Q ss_pred CCccEEEeCCC------------hhhHHHHHHhhhhCCEEEEEc
Q 019332 221 EGIDIYFENVG------------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 221 ~~~d~vid~~g------------~~~~~~~~~~l~~~G~~v~~g 252 (342)
+.+|+||--.. .+.+..+.+.|+++|.++.-.
T Consensus 225 ~~YDVIIvDl~DP~~~~~~~LyT~EFy~~~~~~LkPgGV~V~Qs 268 (374)
T PRK01581 225 SLYDVIIIDFPDPATELLSTLYTSELFARIATFLTEDGAFVCQS 268 (374)
T ss_pred CCccEEEEcCCCccccchhhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 47998754321 125678889999999987653
|
|
| >PRK07502 cyclohexadienyl dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.71 E-value=0.11 Score=46.04 Aligned_cols=89 Identities=18% Similarity=0.262 Sum_probs=60.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+|.|+|+ |.+|.+.+..++..|. +|++..+++++.+.++ +.|...... . +..+.+ ...|+|+.|+.
T Consensus 7 ~~I~IIG~-G~mG~sla~~l~~~g~~~~V~~~dr~~~~~~~a~-~~g~~~~~~--~--~~~~~~-----~~aDvViiavp 75 (307)
T PRK07502 7 DRVALIGI-GLIGSSLARAIRRLGLAGEIVGADRSAETRARAR-ELGLGDRVT--T--SAAEAV-----KGADLVILCVP 75 (307)
T ss_pred cEEEEEee-CHHHHHHHHHHHhcCCCcEEEEEECCHHHHHHHH-hCCCCceec--C--CHHHHh-----cCCCEEEECCC
Confidence 57999995 9999998888888784 8999999988888877 777522111 1 222222 24899999988
Q ss_pred hhhH----HHHHHhhhhCCEEEEEce
Q 019332 232 GKML----DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~~~~----~~~~~~l~~~G~~v~~g~ 253 (342)
.... ......++++..++.+|.
T Consensus 76 ~~~~~~v~~~l~~~l~~~~iv~dvgs 101 (307)
T PRK07502 76 VGASGAVAAEIAPHLKPGAIVTDVGS 101 (307)
T ss_pred HHHHHHHHHHHHhhCCCCCEEEeCcc
Confidence 6433 333345566666666665
|
|
| >PLN02240 UDP-glucose 4-epimerase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.15 Score=46.00 Aligned_cols=34 Identities=21% Similarity=0.261 Sum_probs=30.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
+.+|||+||+|.+|...++.+...|.+|+++++.
T Consensus 5 ~~~vlItGatG~iG~~l~~~L~~~g~~V~~~~~~ 38 (352)
T PLN02240 5 GRTILVTGGAGYIGSHTVLQLLLAGYKVVVIDNL 38 (352)
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCC
Confidence 4689999999999999998888889999998754
|
|
| >PRK04457 spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.18 Score=43.57 Aligned_cols=96 Identities=16% Similarity=0.179 Sum_probs=64.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHCCCCccEE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
.+..+||+.|. |.|..+..+++.. +.+|+++..+++-.+.+++.++.. .-+..... |..+.+.+. .+.+|+|
T Consensus 65 ~~~~~vL~IG~--G~G~l~~~l~~~~p~~~v~~VEidp~vi~~A~~~f~~~~~~~rv~v~~~-Da~~~l~~~-~~~yD~I 140 (262)
T PRK04457 65 PRPQHILQIGL--GGGSLAKFIYTYLPDTRQTAVEINPQVIAVARNHFELPENGERFEVIEA-DGAEYIAVH-RHSTDVI 140 (262)
T ss_pred CCCCEEEEECC--CHhHHHHHHHHhCCCCeEEEEECCHHHHHHHHHHcCCCCCCCceEEEEC-CHHHHHHhC-CCCCCEE
Confidence 35578999995 4577888888766 569999999999888888545431 11222222 444445432 3469987
Q ss_pred E-eCCC----------hhhHHHHHHhhhhCCEEEE
Q 019332 227 F-ENVG----------GKMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 227 i-d~~g----------~~~~~~~~~~l~~~G~~v~ 250 (342)
+ |+.. .+.+..+.++|+++|.++.
T Consensus 141 ~~D~~~~~~~~~~l~t~efl~~~~~~L~pgGvlvi 175 (262)
T PRK04457 141 LVDGFDGEGIIDALCTQPFFDDCRNALSSDGIFVV 175 (262)
T ss_pred EEeCCCCCCCccccCcHHHHHHHHHhcCCCcEEEE
Confidence 5 4321 2467888999999999876
|
|
| >PLN02686 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.084 Score=48.13 Aligned_cols=45 Identities=11% Similarity=0.112 Sum_probs=37.2
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
...+.+|||+||+|.+|..+++.+...|++|+++.++.++.+.+.
T Consensus 50 ~~~~k~VLVTGatGfIG~~lv~~L~~~G~~V~~~~r~~~~~~~l~ 94 (367)
T PLN02686 50 DAEARLVCVTGGVSFLGLAIVDRLLRHGYSVRIAVDTQEDKEKLR 94 (367)
T ss_pred CCCCCEEEEECCchHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH
Confidence 355789999999999999999999889999998887766554443
|
|
| >TIGR01472 gmd GDP-mannose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=95.70 E-value=0.043 Score=49.49 Aligned_cols=35 Identities=20% Similarity=0.286 Sum_probs=31.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.+|||+||+|.+|..+++.+...|.+|++++++.+
T Consensus 1 ~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~ 35 (343)
T TIGR01472 1 KIALITGITGQDGSYLAEFLLEKGYEVHGLIRRSS 35 (343)
T ss_pred CeEEEEcCCCcHHHHHHHHHHHCCCEEEEEecCCc
Confidence 37999999999999999999889999999987653
|
Excluded from this model are members of the clade that score poorly because of highly dervied (phylogenetically long-branch) sequences, e.g. Aneurinibacillus thermoaerophilus Gmd, described as a bifunctional GDP-mannose 4,6-dehydratase/GDP-6-deoxy-D-lyxo-4-hexulose reductase (PUBMED:11096116). |
| >PRK06550 fabG 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.022 Score=48.15 Aligned_cols=73 Identities=21% Similarity=0.236 Sum_probs=46.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.+++|+|++|++|.+.+..+...|++|+++.++..+. .. -.. ..+..+-. +..+.+.+.. +.+|+++++.|
T Consensus 4 ~~k~~lVtGas~~iG~~ia~~l~~~G~~v~~~~r~~~~~--~~--~~~-~~~~~D~~-~~~~~~~~~~-~~id~lv~~ag 76 (235)
T PRK06550 4 MTKTVLITGAASGIGLAQARAFLAQGAQVYGVDKQDKPD--LS--GNF-HFLQLDLS-DDLEPLFDWV-PSVDILCNTAG 76 (235)
T ss_pred CCCEEEEcCCCchHHHHHHHHHHHCCCEEEEEeCCcccc--cC--CcE-EEEECChH-HHHHHHHHhh-CCCCEEEECCC
Confidence 356899999999999999988888899999998765431 11 011 11211111 1122232222 35899999887
|
|
| >PLN02695 GDP-D-mannose-3',5'-epimerase | Back alignment and domain information |
|---|
Probab=95.67 E-value=0.1 Score=47.62 Aligned_cols=37 Identities=22% Similarity=0.307 Sum_probs=33.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
..+.+|||+|++|-+|..++..+...|.+|+++++..
T Consensus 19 ~~~~~IlVtGgtGfIG~~l~~~L~~~G~~V~~v~r~~ 55 (370)
T PLN02695 19 SEKLRICITGAGGFIASHIARRLKAEGHYIIASDWKK 55 (370)
T ss_pred CCCCEEEEECCccHHHHHHHHHHHhCCCEEEEEEecc
Confidence 3568999999999999999999998999999998754
|
|
| >PRK06719 precorrin-2 dehydrogenase; Validated | Back alignment and domain information |
|---|
Probab=95.64 E-value=0.13 Score=40.72 Aligned_cols=87 Identities=9% Similarity=0.109 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|+|.|+ |.+|..-++.+...|++|++++ ++..+.+. +++.-. +..+ .+.+. --.++|+|+-+.+
T Consensus 12 ~~~~vlVvGG-G~va~rka~~Ll~~ga~V~VIs--p~~~~~l~-~l~~i~-~~~~---~~~~~----dl~~a~lViaaT~ 79 (157)
T PRK06719 12 HNKVVVIIGG-GKIAYRKASGLKDTGAFVTVVS--PEICKEMK-ELPYIT-WKQK---TFSND----DIKDAHLIYAATN 79 (157)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEc--CccCHHHH-hccCcE-EEec---ccChh----cCCCceEEEECCC
Confidence 5688999997 9999988888888899998884 33334444 444211 2211 11111 1125899999999
Q ss_pred hhhHHHHHHhhhhCCEEEE
Q 019332 232 GKMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 232 ~~~~~~~~~~l~~~G~~v~ 250 (342)
.+..+.....++..+.++.
T Consensus 80 d~e~N~~i~~~a~~~~~vn 98 (157)
T PRK06719 80 QHAVNMMVKQAAHDFQWVN 98 (157)
T ss_pred CHHHHHHHHHHHHHCCcEE
Confidence 8766665555544444444
|
|
| >COG1086 Predicted nucleoside-diphosphate sugar epimerases [Cell envelope biogenesis, outer membrane / Carbohydrate transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.63 E-value=0.051 Score=50.99 Aligned_cols=78 Identities=13% Similarity=0.195 Sum_probs=53.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC----Ce----eEecCCchhHHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF----DE----AFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~i~~~~~~ 221 (342)
-.|.+|||+||+|++|...+.-....+. +++...+++.++....+++.. .. +-|-++ .+.+.+...+
T Consensus 248 ~~gK~vLVTGagGSiGsel~~qil~~~p~~i~l~~~~E~~~~~i~~el~~~~~~~~~~~~igdVrD----~~~~~~~~~~ 323 (588)
T COG1086 248 LTGKTVLVTGGGGSIGSELCRQILKFNPKEIILFSRDEYKLYLIDMELREKFPELKLRFYIGDVRD----RDRVERAMEG 323 (588)
T ss_pred cCCCEEEEeCCCCcHHHHHHHHHHhcCCCEEEEecCchHHHHHHHHHHHhhCCCcceEEEeccccc----HHHHHHHHhc
Confidence 3678999999999999876665555576 888999888877555443322 21 112222 3455555556
Q ss_pred -CccEEEeCCCh
Q 019332 222 -GIDIYFENVGG 232 (342)
Q Consensus 222 -~~d~vid~~g~ 232 (342)
++|+||.++.-
T Consensus 324 ~kvd~VfHAAA~ 335 (588)
T COG1086 324 HKVDIVFHAAAL 335 (588)
T ss_pred CCCceEEEhhhh
Confidence 79999998873
|
|
| >PLN02244 tocopherol O-methyltransferase | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.075 Score=47.86 Aligned_cols=98 Identities=15% Similarity=0.179 Sum_probs=63.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
+++++||=.| .|.|..+..+++..|++|++++.+++..+.+++ +.+...-+..... +..+ + ....+.+|+|+
T Consensus 117 ~~~~~VLDiG--CG~G~~~~~La~~~g~~v~gvD~s~~~i~~a~~~~~~~g~~~~v~~~~~-D~~~-~-~~~~~~FD~V~ 191 (340)
T PLN02244 117 KRPKRIVDVG--CGIGGSSRYLARKYGANVKGITLSPVQAARANALAAAQGLSDKVSFQVA-DALN-Q-PFEDGQFDLVW 191 (340)
T ss_pred CCCCeEEEec--CCCCHHHHHHHHhcCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEc-Cccc-C-CCCCCCccEEE
Confidence 6788998888 567888889998889999999999986666552 2233211111111 1110 0 11123699997
Q ss_pred eCCCh-------hhHHHHHHhhhhCCEEEEEce
Q 019332 228 ENVGG-------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 228 d~~g~-------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
-.... ..+..+.+.|+|+|+++....
T Consensus 192 s~~~~~h~~d~~~~l~e~~rvLkpGG~lvi~~~ 224 (340)
T PLN02244 192 SMESGEHMPDKRKFVQELARVAAPGGRIIIVTW 224 (340)
T ss_pred ECCchhccCCHHHHHHHHHHHcCCCcEEEEEEe
Confidence 64331 356788899999999987654
|
|
| >COG1028 FabG Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) [Secondary metabolites biosynthesis, transport, and catabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.62 E-value=0.093 Score=44.82 Aligned_cols=80 Identities=21% Similarity=0.266 Sum_probs=50.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcC-----CCe--eEecCC-chhH---HHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFG-----FDE--AFNYKE-EPDL---NEALKRY 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g-----~~~--v~~~~~-~~~~---~~~i~~~ 218 (342)
.+.++||+|+++++|.+.+..+...|++|+++.++.++ .+.+.+... ... ..|..+ .... .+.+.+.
T Consensus 4 ~~~~ilITGas~GiG~aia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~~v~~~~~~~~~~ 83 (251)
T COG1028 4 SGKVALVTGASSGIGRAIARALAREGARVVVAARRSEEEAAEALAAAIKEAGGGRAAAVAADVSDDEESVEALVAAAEEE 83 (251)
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEcCCCchhhHHHHHHHHHhcCCCcEEEEEecCCCCHHHHHHHHHHHHHH
Confidence 46789999999999999888888999998888877553 233331222 111 145443 3122 2233332
Q ss_pred CCCCccEEEeCCCh
Q 019332 219 FPEGIDIYFENVGG 232 (342)
Q Consensus 219 ~~~~~d~vid~~g~ 232 (342)
-|++|++++++|.
T Consensus 84 -~g~id~lvnnAg~ 96 (251)
T COG1028 84 -FGRIDILVNNAGI 96 (251)
T ss_pred -cCCCCEEEECCCC
Confidence 2359999999884
|
|
| >COG1090 Predicted nucleoside-diphosphate sugar epimerase [General function prediction only] | Back alignment and domain information |
|---|
Probab=95.58 E-value=0.026 Score=48.04 Aligned_cols=67 Identities=19% Similarity=0.193 Sum_probs=47.2
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
|+|+|++|-||.+.++..+..|.+|++++|++.+.+.. +.. . +. ..+.+.+....++|+|||-+|..
T Consensus 1 IliTGgTGlIG~~L~~~L~~~gh~v~iltR~~~~~~~~---~~~-~-v~------~~~~~~~~~~~~~DavINLAG~~ 67 (297)
T COG1090 1 ILITGGTGLIGRALTARLRKGGHQVTILTRRPPKASQN---LHP-N-VT------LWEGLADALTLGIDAVINLAGEP 67 (297)
T ss_pred CeEeccccchhHHHHHHHHhCCCeEEEEEcCCcchhhh---cCc-c-cc------ccchhhhcccCCCCEEEECCCCc
Confidence 68999999999999999999999999999998765432 222 1 11 11122222222699999999953
|
|
| >PRK12748 3-ketoacyl-(acyl-carrier-protein) reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.082 Score=45.39 Aligned_cols=35 Identities=17% Similarity=0.116 Sum_probs=29.8
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
.+.++||+||+ |++|.+.+..+...|++|++++++
T Consensus 4 ~~k~vlItGas~~~giG~~la~~l~~~G~~vi~~~r~ 40 (256)
T PRK12748 4 MKKIALVTGASRLNGIGAAVCRRLAAKGIDIFFTYWS 40 (256)
T ss_pred CCcEEEEeCCCCCCCHHHHHHHHHHHcCCcEEEEcCC
Confidence 35789999998 489999888887889999999876
|
|
| >TIGR02356 adenyl_thiF thiazole biosynthesis adenylyltransferase ThiF, E | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.18 Score=41.71 Aligned_cols=34 Identities=21% Similarity=0.242 Sum_probs=28.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS 186 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s 186 (342)
.+.+|+|.|+ |++|..+++.+...|. +++.++.+
T Consensus 20 ~~~~VlviG~-GglGs~ia~~La~~Gv~~i~lvD~d 54 (202)
T TIGR02356 20 LNSHVLIIGA-GGLGSPAALYLAGAGVGTIVIVDDD 54 (202)
T ss_pred cCCCEEEECC-CHHHHHHHHHHHHcCCCeEEEecCC
Confidence 3468999996 9999999999999998 88888765
|
coli subfamily. Members of the HesA/MoeB/ThiF family of proteins (pfam00899) include a number of members encoded in the midst of thiamine biosynthetic operons. This mix of known and putative ThiF proteins shows a deep split in phylogenetic trees, with the Escherichia. coli ThiF and the E. coli MoeB proteins seemingly more closely related than E. coli ThiF and Campylobacter (for example) ThiF. This model represents the more widely distributed clade of ThiF proteins such found in E. coli. |
| >KOG4169 consensus 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases [Lipid transport and metabolism; General function prediction only] | Back alignment and domain information |
|---|
Probab=95.57 E-value=0.048 Score=45.07 Aligned_cols=104 Identities=17% Similarity=0.204 Sum_probs=69.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----CeeE--ecCC--chhHHHHHHHHC--CCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----DEAF--NYKE--EPDLNEALKRYF--PEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~~v~--~~~~--~~~~~~~i~~~~--~~~ 222 (342)
|.+++++|+.||||++....+...|+++.++..+.|..+... +|.+ ..++ .++- ..++.+..++.. -|.
T Consensus 5 GKna~vtggagGIGl~~sk~Ll~kgik~~~i~~~~En~~a~a-kL~ai~p~~~v~F~~~DVt~~~~~~~~f~ki~~~fg~ 83 (261)
T KOG4169|consen 5 GKNALVTGGAGGIGLATSKALLEKGIKVLVIDDSEENPEAIA-KLQAINPSVSVIFIKCDVTNRGDLEAAFDKILATFGT 83 (261)
T ss_pred CceEEEecCCchhhHHHHHHHHHcCchheeehhhhhCHHHHH-HHhccCCCceEEEEEeccccHHHHHHHHHHHHHHhCc
Confidence 788999999999999999988899999999988888776666 6654 1222 2211 114444444433 246
Q ss_pred ccEEEeCCCh-h--h---------------HHHHHHhh-----hhCCEEEEEceeccc
Q 019332 223 IDIYFENVGG-K--M---------------LDAVLLNM-----KIHGRIAVCGMISQY 257 (342)
Q Consensus 223 ~d~vid~~g~-~--~---------------~~~~~~~l-----~~~G~~v~~g~~~~~ 257 (342)
+|+++|.+|- . . ...+++.+ .++|.+|..++..+-
T Consensus 84 iDIlINgAGi~~dkd~e~Ti~vNLtgvin~T~~alpyMdk~~gG~GGiIvNmsSv~GL 141 (261)
T KOG4169|consen 84 IDILINGAGILDDKDWERTINVNLTGVINGTQLALPYMDKKQGGKGGIIVNMSSVAGL 141 (261)
T ss_pred eEEEEcccccccchhHHHhhccchhhhhhhhhhhhhhhhhhcCCCCcEEEEecccccc
Confidence 8999998884 1 1 12233333 357899999887663
|
|
| >PRK14189 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.55 E-value=0.14 Score=44.42 Aligned_cols=77 Identities=19% Similarity=0.194 Sum_probs=57.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|+|.|.+.-+|.-.+.++...|++|+...+. .. ++.+.+++ .|+++-++
T Consensus 156 l~Gk~vvViGrs~iVGkPla~lL~~~~atVt~~hs~--------------------t~-~l~~~~~~-----ADIVV~av 209 (285)
T PRK14189 156 LRGAHAVVIGRSNIVGKPMAMLLLQAGATVTICHSK--------------------TR-DLAAHTRQ-----ADIVVAAV 209 (285)
T ss_pred CCCCEEEEECCCCccHHHHHHHHHHCCCEEEEecCC--------------------CC-CHHHHhhh-----CCEEEEcC
Confidence 478999999998888999999999999999875421 11 33333433 79999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEcee
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
|...+-. -+.++++..++.+|..
T Consensus 210 G~~~~i~-~~~ik~gavVIDVGin 232 (285)
T PRK14189 210 GKRNVLT-ADMVKPGATVIDVGMN 232 (285)
T ss_pred CCcCccC-HHHcCCCCEEEEcccc
Confidence 9843322 2789999999999864
|
|
| >PLN02214 cinnamoyl-CoA reductase | Back alignment and domain information |
|---|
Probab=95.54 E-value=0.093 Score=47.33 Aligned_cols=38 Identities=21% Similarity=0.332 Sum_probs=33.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
++.+|||+||+|.+|..+++.+...|.+|++++++.++
T Consensus 9 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 46 (342)
T PLN02214 9 AGKTVCVTGAGGYIASWIVKILLERGYTVKGTVRNPDD 46 (342)
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCchh
Confidence 46789999999999999999988889999999987653
|
|
| >PRK10675 UDP-galactose-4-epimerase; Provisional | Back alignment and domain information |
|---|
Probab=95.51 E-value=0.17 Score=45.39 Aligned_cols=73 Identities=19% Similarity=0.171 Sum_probs=44.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hH---HHHHHHcCC-C-ee--EecCCchhHHHHHHHHCCC-CccE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KI---DLLKNKFGF-D-EA--FNYKEEPDLNEALKRYFPE-GIDI 225 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~---~~~~~~~g~-~-~v--~~~~~~~~~~~~i~~~~~~-~~d~ 225 (342)
+|||+||+|.+|...++.+...|.+|+++.+... +. ..+. +++. . .. .|..+. + .+.+.... ++|+
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~-~---~~~~~~~~~~~d~ 76 (338)
T PRK10675 2 RVLVTGGSGYIGSHTCVQLLQNGHDVVILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNE-A---LLTEILHDHAIDT 76 (338)
T ss_pred eEEEECCCChHHHHHHHHHHHCCCeEEEEecCCCchHhHHHHHH-HhcCCCceEEEccCCCH-H---HHHHHHhcCCCCE
Confidence 6899999999999998888888999998864322 11 1122 2221 1 12 233332 2 23332223 6999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
|+++++.
T Consensus 77 vvh~a~~ 83 (338)
T PRK10675 77 VIHFAGL 83 (338)
T ss_pred EEECCcc
Confidence 9998763
|
|
| >PRK12749 quinate/shikimate dehydrogenase; Reviewed | Back alignment and domain information |
|---|
Probab=95.49 E-value=0.19 Score=44.00 Aligned_cols=77 Identities=13% Similarity=0.149 Sum_probs=46.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh---hhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK---DKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~---~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
.+.++||.|+ ||.+.+++..+...|+ ++++..|++ +|.+.+.++++.. ..+..... +-.+.+.+.. ..+|+
T Consensus 123 ~~k~vlvlGa-GGaarAi~~~l~~~g~~~i~i~nRt~~~~~ka~~la~~~~~~~~~~~~~~~~-~~~~~l~~~~-~~aDi 199 (288)
T PRK12749 123 KGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDL-ADQQAFAEAL-ASADI 199 (288)
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEeCCccHHHHHHHHHHHhhhccCceEEEech-hhhhhhhhhc-ccCCE
Confidence 5678999997 8889887776777788 899999884 3555554355421 11111111 1011122211 25899
Q ss_pred EEeCCC
Q 019332 226 YFENVG 231 (342)
Q Consensus 226 vid~~g 231 (342)
|++|..
T Consensus 200 vINaTp 205 (288)
T PRK12749 200 LTNGTK 205 (288)
T ss_pred EEECCC
Confidence 999875
|
|
| >TIGR03466 HpnA hopanoid-associated sugar epimerase | Back alignment and domain information |
|---|
Probab=95.47 E-value=0.036 Score=49.39 Aligned_cols=71 Identities=17% Similarity=0.188 Sum_probs=48.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+|++|.+|..+++.+...|.+|+++.+++++...+. ..+... ..|..+. +.+.+... ++|+||++++
T Consensus 2 ~vlItG~~G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~----~~l~~~~~-~~d~vi~~a~ 73 (328)
T TIGR03466 2 KVLVTGATGFVGSAVVRLLLEQGEEVRVLVRPTSDRRNLE-GLDVEIVEGDLRDP----ASLRKAVA-GCRALFHVAA 73 (328)
T ss_pred eEEEECCccchhHHHHHHHHHCCCEEEEEEecCccccccc-cCCceEEEeeCCCH----HHHHHHHh-CCCEEEEece
Confidence 6899999999999999988888999999998776543333 334322 2244433 23333322 4899999875
|
The sequences in this family are members of the pfam01370 superfamily of NAD-dependent epimerases and dehydratases typically acting on nucleotide-sugar substrates. The genes of the family modeled here are generally in the same locus with genes involved in the biosynthesis and elaboration of hopene, the cyclization product of the polyisoprenoid squalene. |
| >PRK11036 putative S-adenosyl-L-methionine-dependent methyltransferase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.14 Score=44.02 Aligned_cols=96 Identities=16% Similarity=0.205 Sum_probs=61.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
.++.+||=.| +|.|..+..+++. |.+|++++.+++-.+.+++. .|...-+..... +.. .+.....+.+|+|+
T Consensus 43 ~~~~~vLDiG--cG~G~~a~~la~~-g~~v~~vD~s~~~l~~a~~~~~~~g~~~~v~~~~~-d~~-~l~~~~~~~fD~V~ 117 (255)
T PRK11036 43 PRPLRVLDAG--GGEGQTAIKLAEL-GHQVILCDLSAEMIQRAKQAAEAKGVSDNMQFIHC-AAQ-DIAQHLETPVDLIL 117 (255)
T ss_pred CCCCEEEEeC--CCchHHHHHHHHc-CCEEEEEECCHHHHHHHHHHHHhcCCccceEEEEc-CHH-HHhhhcCCCCCEEE
Confidence 4567888888 5778888888875 88999999999877777632 232111111111 221 22222234699988
Q ss_pred eCCC-----h--hhHHHHHHhhhhCCEEEEE
Q 019332 228 ENVG-----G--KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 228 d~~g-----~--~~~~~~~~~l~~~G~~v~~ 251 (342)
.... . ..+..+.+.|+|+|.++.+
T Consensus 118 ~~~vl~~~~~~~~~l~~~~~~LkpgG~l~i~ 148 (255)
T PRK11036 118 FHAVLEWVADPKSVLQTLWSVLRPGGALSLM 148 (255)
T ss_pred ehhHHHhhCCHHHHHHHHHHHcCCCeEEEEE
Confidence 5322 2 3577889999999998765
|
|
| >PRK06924 short chain dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.46 E-value=0.1 Score=44.51 Aligned_cols=34 Identities=18% Similarity=0.264 Sum_probs=30.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.++||+|++|++|.+.++.+...|++|+++++++
T Consensus 2 k~vlItGasggiG~~ia~~l~~~g~~V~~~~r~~ 35 (251)
T PRK06924 2 RYVIITGTSQGLGEAIANQLLEKGTHVISISRTE 35 (251)
T ss_pred cEEEEecCCchHHHHHHHHHHhcCCEEEEEeCCc
Confidence 3799999999999998888888899999999876
|
|
| >TIGR00715 precor6x_red precorrin-6x reductase | Back alignment and domain information |
|---|
Probab=95.45 E-value=0.084 Score=45.30 Aligned_cols=73 Identities=11% Similarity=0.111 Sum_probs=51.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~ 232 (342)
+|||.||+|- |..++..+...|.+|+++.+++.+.+.+. ..|...+..-.- +- +.+.+...+ ++|+|+|+...
T Consensus 2 ~ILvlGGT~e-gr~la~~L~~~g~~v~~s~~t~~~~~~~~-~~g~~~v~~g~l--~~-~~l~~~l~~~~i~~VIDAtHP 75 (256)
T TIGR00715 2 TVLLMGGTVD-SRAIAKGLIAQGIEILVTVTTSEGKHLYP-IHQALTVHTGAL--DP-QELREFLKRHSIDILVDATHP 75 (256)
T ss_pred eEEEEechHH-HHHHHHHHHhCCCeEEEEEccCCcccccc-ccCCceEEECCC--CH-HHHHHHHHhcCCCEEEEcCCH
Confidence 6999999665 98888777778999999999998777776 555544432221 21 224444434 79999998885
|
This enzyme was found to be a monomer by gel filtration. |
| >PF02737 3HCDH_N: 3-hydroxyacyl-CoA dehydrogenase, NAD binding domain; InterPro: IPR006176 3-hydroxyacyl-CoA dehydrogenase (1 | Back alignment and domain information |
|---|
Probab=95.44 E-value=0.18 Score=40.93 Aligned_cols=39 Identities=18% Similarity=0.192 Sum_probs=32.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
+|.|.|+ |.+|...+.++...|.+|...+.+++..+..+
T Consensus 1 ~V~ViGa-G~mG~~iA~~~a~~G~~V~l~d~~~~~l~~~~ 39 (180)
T PF02737_consen 1 KVAVIGA-GTMGRGIAALFARAGYEVTLYDRSPEALERAR 39 (180)
T ss_dssp EEEEES--SHHHHHHHHHHHHTTSEEEEE-SSHHHHHHHH
T ss_pred CEEEEcC-CHHHHHHHHHHHhCCCcEEEEECChHHHHhhh
Confidence 5889997 99999888888888999999999998776554
|
1.1.35 from EC) (HCDH) [] is an enzyme involved in fatty acid metabolism, it catalyzes the reduction of 3-hydroxyacyl-CoA to 3-oxoacyl-CoA. Most eukaryotic cells have 2 fatty-acid beta-oxidation systems, one located in mitochondria and the other in peroxisomes. In peroxisomes 3-hydroxyacyl-CoA dehydrogenase forms, with enoyl-CoA hydratase (ECH) and 3,2-trans-enoyl-CoA isomerase (ECI) a multifunctional enzyme where the N-terminal domain bears the hydratase/isomerase activities and the C-terminal domain the dehydrogenase activity. There are two mitochondrial enzymes: one which is monofunctional and the other which is, like its peroxisomal counterpart, multifunctional. In Escherichia coli (gene fadB) and Pseudomonas fragi (gene faoA) HCDH is part of a multifunctional enzyme which also contains an ECH/ECI domain as well as a 3-hydroxybutyryl-CoA epimerase domain []. There are two major regions of similarity in the sequences of proteins of the HCDH family, the first one located in the N-terminal, corresponds to the NAD-binding site, the second one is located in the centre of the sequence. This represents the C-terminal domain which is also found in lambda crystallin. Some proteins include two copies of this domain.; GO: 0003857 3-hydroxyacyl-CoA dehydrogenase activity, 0016491 oxidoreductase activity, 0006631 fatty acid metabolic process, 0055114 oxidation-reduction process; PDB: 3K6J_A 1ZCJ_A 2X58_A 1ZEJ_A 3HDH_B 2WTB_A 1WDL_B 2D3T_B 1WDK_A 1WDM_B .... |
| >TIGR01830 3oxo_ACP_reduc 3-oxoacyl-(acyl-carrier-protein) reductase | Back alignment and domain information |
|---|
Probab=95.36 E-value=0.093 Score=44.32 Aligned_cols=77 Identities=17% Similarity=0.249 Sum_probs=47.3
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHH---HcCCC---eeEecCCchhHHHHHHHHC--CCCccEE
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
+||+|++|++|...++.+...|++|+++.++. ++.+.+.+ +.+.. ...|..+...+.+.+.+.. .+.+|.+
T Consensus 1 vlItG~~g~iG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~v 80 (239)
T TIGR01830 1 ALVTGASRGIGRAIALKLAKEGAKVIITYRSSEEGAEEVVEELKAYGVKALGVVCDVSDREDVKAVVEEIEEELGPIDIL 80 (239)
T ss_pred CEEECCCcHHHHHHHHHHHHCCCEEEEEeCCchhHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 58999999999999988888899999998765 22222211 33421 1234444312222222221 1358999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
+.+.|.
T Consensus 81 i~~ag~ 86 (239)
T TIGR01830 81 VNNAGI 86 (239)
T ss_pred EECCCC
Confidence 998884
|
This model represents 3-oxoacyl-[ACP] reductase, also called 3-ketoacyl-acyl carrier protein reductase, an enzyme of fatty acid biosynthesis. |
| >cd05311 NAD_bind_2_malic_enz NAD(P) binding domain of malic enzyme (ME), subgroup 2 | Back alignment and domain information |
|---|
Probab=95.35 E-value=0.25 Score=41.67 Aligned_cols=90 Identities=18% Similarity=0.251 Sum_probs=57.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCE---EEEEeCC----hhh--------HHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCY---VVGSAGS----KDK--------IDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~---Vi~~~~s----~~~--------~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
-.+.+++|.|+ |+.|.+++..+...|++ ++.+.++ .++ .++++ .++... .+ . ++.+.+
T Consensus 23 l~~~rvlvlGA-GgAg~aiA~~L~~~G~~~~~i~ivdr~gl~~~~r~~~L~~~~~~la~-~~~~~~-~~---~-~l~~~l 95 (226)
T cd05311 23 IEEVKIVINGA-GAAGIAIARLLLAAGAKPENIVVVDSKGVIYEGREDDLNPDKNEIAK-ETNPEK-TG---G-TLKEAL 95 (226)
T ss_pred ccCCEEEEECc-hHHHHHHHHHHHHcCcCcceEEEEeCCCccccccchhhhHHHHHHHH-HhccCc-cc---C-CHHHHH
Confidence 45679999997 99999999888888974 8888887 343 22333 333211 11 1 333444
Q ss_pred HHHCCCCccEEEeCCChhhH-HHHHHhhhhCCEEEEEc
Q 019332 216 KRYFPEGIDIYFENVGGKML-DAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 252 (342)
+ ++|++|++.+...+ ...++.++++..++.+.
T Consensus 96 ~-----~~dvlIgaT~~G~~~~~~l~~m~~~~ivf~ls 128 (226)
T cd05311 96 K-----GADVFIGVSRPGVVKKEMIKKMAKDPIVFALA 128 (226)
T ss_pred h-----cCCEEEeCCCCCCCCHHHHHhhCCCCEEEEeC
Confidence 2 38999999974222 35566666666555443
|
Malic enzyme (ME), a member of the amino acid dehydrogenase (DH)-like domain family, catalyzes the oxidative decarboxylation of L-malate to pyruvate in the presence of cations (typically Mg++ or Mn++) with the concomitant reduction of cofactor NAD+ or NADP+. ME has been found in all organisms, and plays important roles in diverse metabolic pathways such as photosynthesis and lipogenesis. This enzyme generally forms homotetramers. The conversion of malate to pyruvate by ME typically involves oxidation of malate to produce oxaloacetate, followed by decarboxylation of oxaloacetate to produce pyruvate and CO2. This subfamily consists primarily of archaeal and bacterial ME. Amino acid DH-like NAD(P)-binding domains are members of the Rossmann fold superfamily and include glutamate, leucine, and phenylalanine DHs, methylene tetrahydrofolate DH, methylene-tetrahydromethanopterin DH, methylene-tetrahydroph |
| >PRK00312 pcm protein-L-isoaspartate O-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=95.34 E-value=0.087 Score=43.93 Aligned_cols=99 Identities=17% Similarity=0.139 Sum_probs=61.3
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
...+++++++||-.|. |.|..+..+++.. .+|+++..+++-.+.+++. .+... ++.... +..+.+. ..+.
T Consensus 72 ~~l~~~~~~~VLeiG~--GsG~~t~~la~~~-~~v~~vd~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~~~ 144 (212)
T PRK00312 72 ELLELKPGDRVLEIGT--GSGYQAAVLAHLV-RRVFSVERIKTLQWEAKRRLKQLGLHN-VSVRHG-DGWKGWP--AYAP 144 (212)
T ss_pred HhcCCCCCCEEEEECC--CccHHHHHHHHHh-CEEEEEeCCHHHHHHHHHHHHHCCCCc-eEEEEC-CcccCCC--cCCC
Confidence 4467889999999984 4566666666654 4899999888766666532 34332 111111 2111111 1136
Q ss_pred ccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 223 IDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 223 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+|+|+-.... .......+.|+++|+++..
T Consensus 145 fD~I~~~~~~~~~~~~l~~~L~~gG~lv~~ 174 (212)
T PRK00312 145 FDRILVTAAAPEIPRALLEQLKEGGILVAP 174 (212)
T ss_pred cCEEEEccCchhhhHHHHHhcCCCcEEEEE
Confidence 9988765443 4556778899999998754
|
|
| >TIGR03840 TMPT_Se_Te thiopurine S-methyltransferase, Se/Te detoxification family | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.25 Score=41.24 Aligned_cols=98 Identities=13% Similarity=0.113 Sum_probs=62.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--------------EecCCchhHHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--------------FNYKEEPDLNEALK 216 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--------------~~~~~~~~~~~~i~ 216 (342)
.++.+||+.| .|.|.-++-+|. .|.+|++++.|+.-.+.+.++.+.... ++.... |+-+. .
T Consensus 33 ~~~~rvLd~G--CG~G~da~~LA~-~G~~V~gvD~S~~Ai~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~-D~~~~-~ 107 (213)
T TIGR03840 33 PAGARVFVPL--CGKSLDLAWLAE-QGHRVLGVELSEIAVEQFFAENGLTPTVTQQGEFTRYRAGNIEIFCG-DFFAL-T 107 (213)
T ss_pred CCCCeEEEeC--CCchhHHHHHHh-CCCeEEEEeCCHHHHHHHHHHcCCCcceeccccceeeecCceEEEEc-cCCCC-C
Confidence 5677999999 477888888886 599999999999866665423333100 010000 11000 0
Q ss_pred HHCCCCccEEEeCCC---------hhhHHHHHHhhhhCCEEEEEce
Q 019332 217 RYFPEGIDIYFENVG---------GKMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 217 ~~~~~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~g~ 253 (342)
....+.+|.++|+.. ...+..+.++|+|+|+++.+..
T Consensus 108 ~~~~~~fD~i~D~~~~~~l~~~~R~~~~~~l~~lLkpgG~~ll~~~ 153 (213)
T TIGR03840 108 AADLGPVDAVYDRAALIALPEEMRQRYAAHLLALLPPGARQLLITL 153 (213)
T ss_pred cccCCCcCEEEechhhccCCHHHHHHHHHHHHHHcCCCCeEEEEEE
Confidence 000125899999764 1357788999999998766654
|
Members of this family are thiopurine S-methyltransferase from a branch in which at least some member proteins can perform selenium methylation as a means to detoxify selenium, or perform a related detoxification of tellurium. Note that the EC number definition does not specify a particular thiopurine, but rather represents a class of activity. |
| >PRK13243 glyoxylate reductase; Reviewed | Back alignment and domain information |
|---|
Probab=95.32 E-value=0.14 Score=45.91 Aligned_cols=87 Identities=24% Similarity=0.215 Sum_probs=56.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++.+|.+|++..++.... ... .++... . ++.+.+.+ .|+|+-+..
T Consensus 149 ~gktvgIiG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~-~~~-~~~~~~----~---~l~ell~~-----aDiV~l~lP 213 (333)
T PRK13243 149 YGKTIGIIGF-GRIGQAVARRAKGFGMRILYYSRTRKPE-AEK-ELGAEY----R---PLEELLRE-----SDFVSLHVP 213 (333)
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCChh-hHH-HcCCEe----c---CHHHHHhh-----CCEEEEeCC
Confidence 5789999996 9999999999999999999998765432 222 444311 1 23333332 677776665
Q ss_pred h-h----h-HHHHHHhhhhCCEEEEEce
Q 019332 232 G-K----M-LDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~----~-~~~~~~~l~~~G~~v~~g~ 253 (342)
. + . -...+..++++..+++++.
T Consensus 214 ~t~~T~~~i~~~~~~~mk~ga~lIN~aR 241 (333)
T PRK13243 214 LTKETYHMINEERLKLMKPTAILVNTAR 241 (333)
T ss_pred CChHHhhccCHHHHhcCCCCeEEEECcC
Confidence 3 2 1 1345566777776666653
|
|
| >KOG4022 consensus Dihydropteridine reductase DHPR/QDPR [Amino acid transport and metabolism] | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.3 Score=38.12 Aligned_cols=96 Identities=17% Similarity=0.196 Sum_probs=64.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc-----hhHHHHHHHHCCC-CccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE-----PDLNEALKRYFPE-GIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~-----~~~~~~i~~~~~~-~~d~v 226 (342)
..+|+|.|+-|.+|.+-++..+..++-|.-++-++++... ...+++.++. ....+++-+...+ .+|.|
T Consensus 3 agrVivYGGkGALGSacv~~FkannywV~siDl~eNe~Ad------~sI~V~~~~swtEQe~~v~~~vg~sL~gekvDav 76 (236)
T KOG4022|consen 3 AGRVIVYGGKGALGSACVEFFKANNYWVLSIDLSENEQAD------SSILVDGNKSWTEQEQSVLEQVGSSLQGEKVDAV 76 (236)
T ss_pred CceEEEEcCcchHhHHHHHHHHhcCeEEEEEeeccccccc------ceEEecCCcchhHHHHHHHHHHHHhhcccccceE
Confidence 3579999999999999999999999998888877664221 1123333321 1233444444555 89999
Q ss_pred EeCCCh-h--------h------------------HHHHHHhhhhCCEEEEEcee
Q 019332 227 FENVGG-K--------M------------------LDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 227 id~~g~-~--------~------------------~~~~~~~l~~~G~~v~~g~~ 254 (342)
|..+|+ . . ...+...|+++|-+-+.|..
T Consensus 77 ~CVAGGWAGGnAksKdl~KNaDLMwKQSvwtSaIsa~lAt~HLK~GGLL~LtGAk 131 (236)
T KOG4022|consen 77 FCVAGGWAGGNAKSKDLVKNADLMWKQSVWTSAISAKLATTHLKPGGLLQLTGAK 131 (236)
T ss_pred EEeeccccCCCcchhhhhhchhhHHHHHHHHHHHHHHHHHhccCCCceeeecccc
Confidence 987663 1 0 12234578999998888763
|
|
| >PRK08618 ornithine cyclodeaminase; Validated | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.12 Score=46.24 Aligned_cols=94 Identities=12% Similarity=0.067 Sum_probs=63.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHH-HHHcCC-EEEEEeCChhhHHHHHHHc----CCCeeEecCCchhHHHHHHHHCCCCcc
Q 019332 151 KQGECVFISAASGAVGQLVGQF-AKLLGC-YVVGSAGSKDKIDLLKNKF----GFDEAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~l-a~~~ga-~Vi~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
....+++|.|+ |+.|.+.+.. +...++ +|.+..+++++.+.+.+++ +.. +..+. ++.+.++ ..|
T Consensus 125 ~~~~~v~iiGa-G~~a~~~~~al~~~~~~~~v~v~~r~~~~a~~~~~~~~~~~~~~-~~~~~---~~~~~~~-----~aD 194 (325)
T PRK08618 125 EDAKTLCLIGT-GGQAKGQLEAVLAVRDIERVRVYSRTFEKAYAFAQEIQSKFNTE-IYVVN---SADEAIE-----EAD 194 (325)
T ss_pred CCCcEEEEECC-cHHHHHHHHHHHhcCCccEEEEECCCHHHHHHHHHHHHHhcCCc-EEEeC---CHHHHHh-----cCC
Confidence 34578999996 9999876654 456677 7888888888876555333 332 22222 3333342 389
Q ss_pred EEEeCCChhhHHHHHHhhhhCCEEEEEceec
Q 019332 225 IYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 225 ~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|+.|.++..-... ++++++-++..+|...
T Consensus 195 iVi~aT~s~~p~i~-~~l~~G~hV~~iGs~~ 224 (325)
T PRK08618 195 IIVTVTNAKTPVFS-EKLKKGVHINAVGSFM 224 (325)
T ss_pred EEEEccCCCCcchH-HhcCCCcEEEecCCCC
Confidence 99999998432233 8899999999998754
|
|
| >PF10727 Rossmann-like: Rossmann-like domain; InterPro: IPR019665 This entry represents an NAD/NADP-binding domain with a core Rossmann-type fold, found in an uncharacterised protein family thought to be putative NADP oxidoreductase coenzyme F420-dependent proteins and/or NAD-dependent glycerol-3-phosphate dehydrogenase-like proteins | Back alignment and domain information |
|---|
Probab=95.31 E-value=0.068 Score=40.48 Aligned_cols=81 Identities=21% Similarity=0.187 Sum_probs=51.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.-+|-|+|+ |-+|..+...++..|.+|..+. ++.+..+.+...++...+.+..+ .+ ...|++|-++.
T Consensus 10 ~l~I~iIGa-GrVG~~La~aL~~ag~~v~~v~srs~~sa~~a~~~~~~~~~~~~~~------~~-----~~aDlv~iavp 77 (127)
T PF10727_consen 10 RLKIGIIGA-GRVGTALARALARAGHEVVGVYSRSPASAERAAAFIGAGAILDLEE------IL-----RDADLVFIAVP 77 (127)
T ss_dssp --EEEEECT-SCCCCHHHHHHHHTTSEEEEESSCHH-HHHHHHC--TT-----TTG------GG-----CC-SEEEE-S-
T ss_pred ccEEEEECC-CHHHHHHHHHHHHCCCeEEEEEeCCccccccccccccccccccccc------cc-----ccCCEEEEEec
Confidence 357999997 9999999999999999998875 44445566653444433333221 11 24899999999
Q ss_pred hhhHHHHHHhhhhC
Q 019332 232 GKMLDAVLLNMKIH 245 (342)
Q Consensus 232 ~~~~~~~~~~l~~~ 245 (342)
.+.+..+.+.|...
T Consensus 78 DdaI~~va~~La~~ 91 (127)
T PF10727_consen 78 DDAIAEVAEQLAQY 91 (127)
T ss_dssp CCHHHHHHHHHHCC
T ss_pred hHHHHHHHHHHHHh
Confidence 98888888888765
|
This Rossmann-fold domain consists of 3-layers alpha/beta/alpha, where the six beta strands are parallel in the order 321456.; PDB: 3DFU_A 3C24_A. |
| >TIGR01831 fabG_rel 3-oxoacyl-(acyl-carrier-protein) reductase, putative | Back alignment and domain information |
|---|
Probab=95.29 E-value=0.097 Score=44.33 Aligned_cols=76 Identities=14% Similarity=0.125 Sum_probs=46.2
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
+||+|++|++|...++.+...|++|+++++++ ++.+.+.++ .+.. . ..|..+...+...+.+.. .+.+|.+
T Consensus 1 vlItGas~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~i~~l 80 (239)
T TIGR01831 1 VLVTGASRGIGRAIANRLAADGFEICVHYHSGRSDAESVVSAIQAQGGNARLLQFDVADRVACRTLLEADIAEHGAYYGV 80 (239)
T ss_pred CEEeCCCchHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCeEEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 58999999999999998888899999888653 333322212 2321 1 234444312323233221 1358888
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
+.+.|
T Consensus 81 i~~ag 85 (239)
T TIGR01831 81 VLNAG 85 (239)
T ss_pred EECCC
Confidence 88877
|
This model represents a small, very well conserved family of proteins closely related to the FabG family, TIGR01830, and possibly equal in function. In all completed genomes with a member of this family, a FabG in TIGR01830 is also found. |
| >COG2264 PrmA Ribosomal protein L11 methylase [Translation, ribosomal structure and biogenesis] | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.26 Score=43.01 Aligned_cols=152 Identities=20% Similarity=0.227 Sum_probs=85.6
Q ss_pred CCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh-cCCCCCCEEEEecCCcHHHHHH
Q 019332 91 PEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLV 169 (342)
Q Consensus 91 ~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~-~~~~~~~~vlI~ga~g~vG~~a 169 (342)
...++|++.+..-+|.+|..-..+.+.++ ... +.|-.+ ....|++ ||... ..++++.+||=.| .|.|..+
T Consensus 107 ~P~rig~~f~I~Psw~~~~~~~~~~~i~l-DPG--lAFGTG---~HpTT~l-cL~~Le~~~~~g~~vlDvG--cGSGILa 177 (300)
T COG2264 107 HPVRIGERFVIVPSWREYPEPSDELNIEL-DPG--LAFGTG---THPTTSL-CLEALEKLLKKGKTVLDVG--CGSGILA 177 (300)
T ss_pred CcEEeeeeEEECCCCccCCCCCCceEEEE-ccc--cccCCC---CChhHHH-HHHHHHHhhcCCCEEEEec--CChhHHH
Confidence 34678999888888877644433456777 444 443211 2223332 33222 3357999999998 4567666
Q ss_pred HHHHHHcCC-EEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh----hhHHHHHHh
Q 019332 170 GQFAKLLGC-YVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG----KMLDAVLLN 241 (342)
Q Consensus 170 i~la~~~ga-~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~----~~~~~~~~~ 241 (342)
|..++ +|| +|++++.++--.+.+++ .-+.......... +. .....++.+|+|+-.+=. ...+...+.
T Consensus 178 IAa~k-LGA~~v~g~DiDp~AV~aa~eNa~~N~v~~~~~~~~~-~~---~~~~~~~~~DvIVANILA~vl~~La~~~~~~ 252 (300)
T COG2264 178 IAAAK-LGAKKVVGVDIDPQAVEAARENARLNGVELLVQAKGF-LL---LEVPENGPFDVIVANILAEVLVELAPDIKRL 252 (300)
T ss_pred HHHHH-cCCceEEEecCCHHHHHHHHHHHHHcCCchhhhcccc-cc---hhhcccCcccEEEehhhHHHHHHHHHHHHHH
Confidence 65554 477 79999988754444432 1122210000000 11 111112368988654422 245677789
Q ss_pred hhhCCEEEEEceecc
Q 019332 242 MKIHGRIAVCGMISQ 256 (342)
Q Consensus 242 l~~~G~~v~~g~~~~ 256 (342)
++|+|++++.|....
T Consensus 253 lkpgg~lIlSGIl~~ 267 (300)
T COG2264 253 LKPGGRLILSGILED 267 (300)
T ss_pred cCCCceEEEEeehHh
Confidence 999999999987543
|
|
| >PRK06849 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=95.28 E-value=0.22 Score=45.85 Aligned_cols=96 Identities=13% Similarity=0.098 Sum_probs=61.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEec--CCchhHHHHHHHHCCC-CccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNY--KEEPDLNEALKRYFPE-GIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~--~~~~~~~~~i~~~~~~-~~d~v 226 (342)
...+|||+|+..+.|+..++.++..|.+|+++++++....... ..++. .+.. .+...+.+.+.++... ++|++
T Consensus 3 ~~~~VLI~G~~~~~~l~iar~l~~~G~~Vi~~d~~~~~~~~~s--~~~d~~~~~p~p~~d~~~~~~~L~~i~~~~~id~v 80 (389)
T PRK06849 3 TKKTVLITGARAPAALELARLFHNAGHTVILADSLKYPLSRFS--RAVDGFYTIPSPRWDPDAYIQALLSIVQRENIDLL 80 (389)
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHH--HhhhheEEeCCCCCCHHHHHHHHHHHHHHcCCCEE
Confidence 3478999999888999999999999999999998765433222 12222 2211 1112567777776655 79999
Q ss_pred EeCCChh-hHHHHHHhhhhCCEEE
Q 019332 227 FENVGGK-MLDAVLLNMKIHGRIA 249 (342)
Q Consensus 227 id~~g~~-~~~~~~~~l~~~G~~v 249 (342)
|-+.... .+....+.+.+..++.
T Consensus 81 IP~~e~~~~~a~~~~~l~~~~~v~ 104 (389)
T PRK06849 81 IPTCEEVFYLSHAKEELSAYCEVL 104 (389)
T ss_pred EECChHHHhHHhhhhhhcCCcEEE
Confidence 9776642 3333344565555443
|
|
| >PLN00203 glutamyl-tRNA reductase | Back alignment and domain information |
|---|
Probab=95.23 E-value=0.15 Score=48.35 Aligned_cols=73 Identities=22% Similarity=0.355 Sum_probs=51.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+.+|+|+|+ |.+|.++++.+...|+ +|+++.++.++.+.+.++++... +.+....+..+.+ ..+|+||.|.+
T Consensus 266 ~kkVlVIGA-G~mG~~~a~~L~~~G~~~V~V~nRs~era~~La~~~~g~~-i~~~~~~dl~~al-----~~aDVVIsAT~ 338 (519)
T PLN00203 266 SARVLVIGA-GKMGKLLVKHLVSKGCTKMVVVNRSEERVAALREEFPDVE-IIYKPLDEMLACA-----AEADVVFTSTS 338 (519)
T ss_pred CCEEEEEeC-HHHHHHHHHHHHhCCCCeEEEEeCCHHHHHHHHHHhCCCc-eEeecHhhHHHHH-----hcCCEEEEccC
Confidence 678999997 9999999999988998 89999999988877764564211 1111110222222 24899999988
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 339 s 339 (519)
T PLN00203 339 S 339 (519)
T ss_pred C
Confidence 7
|
|
| >PRK07574 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.22 E-value=0.18 Score=46.02 Aligned_cols=89 Identities=16% Similarity=0.089 Sum_probs=56.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.||+..++.++.+|.+|++..++....+... .+|... + . ++.+.++ ..|+|+.+..
T Consensus 191 ~gktVGIvG~-G~IG~~vA~~l~~fG~~V~~~dr~~~~~~~~~-~~g~~~---~-~--~l~ell~-----~aDvV~l~lP 257 (385)
T PRK07574 191 EGMTVGIVGA-GRIGLAVLRRLKPFDVKLHYTDRHRLPEEVEQ-ELGLTY---H-V--SFDSLVS-----VCDVVTIHCP 257 (385)
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEECCCCCchhhHh-hcCcee---c-C--CHHHHhh-----cCCEEEEcCC
Confidence 5678999996 99999999999999999999998753333333 444321 1 1 2222322 2677766665
Q ss_pred h-hh----H-HHHHHhhhhCCEEEEEce
Q 019332 232 G-KM----L-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~~----~-~~~~~~l~~~G~~v~~g~ 253 (342)
- +. + ...+..|+++..+|+++.
T Consensus 258 lt~~T~~li~~~~l~~mk~ga~lIN~aR 285 (385)
T PRK07574 258 LHPETEHLFDADVLSRMKRGSYLVNTAR 285 (385)
T ss_pred CCHHHHHHhCHHHHhcCCCCcEEEECCC
Confidence 3 21 1 245566777766666653
|
|
| >PLN02427 UDP-apiose/xylose synthase | Back alignment and domain information |
|---|
Probab=95.18 E-value=0.12 Score=47.38 Aligned_cols=75 Identities=16% Similarity=0.079 Sum_probs=48.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCC------Cee--EecCCchhHHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGF------DEA--FNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~------~~v--~~~~~~~~~~~~i~~~~~~ 221 (342)
.+..+|||+||+|-+|..+++.+... |.+|++++++.++...+. ..+. -++ .|..+. +.+.+...
T Consensus 12 ~~~~~VlVTGgtGfIGs~lv~~L~~~~g~~V~~l~r~~~~~~~l~-~~~~~~~~~~~~~~~~Dl~d~----~~l~~~~~- 85 (386)
T PLN02427 12 IKPLTICMIGAGGFIGSHLCEKLMTETPHKVLALDVYNDKIKHLL-EPDTVPWSGRIQFHRINIKHD----SRLEGLIK- 85 (386)
T ss_pred ccCcEEEEECCcchHHHHHHHHHHhcCCCEEEEEecCchhhhhhh-ccccccCCCCeEEEEcCCCCh----HHHHHHhh-
Confidence 34457999999999999988888776 589999987766554443 2221 011 222222 22333332
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|+||.+++
T Consensus 86 ~~d~ViHlAa 95 (386)
T PLN02427 86 MADLTINLAA 95 (386)
T ss_pred cCCEEEEccc
Confidence 4899999987
|
|
| >COG1052 LdhA Lactate dehydrogenase and related dehydrogenases [Energy production and conversion / Coenzyme metabolism / General function prediction only] | Back alignment and domain information |
|---|
Probab=95.16 E-value=0.17 Score=45.12 Aligned_cols=88 Identities=24% Similarity=0.152 Sum_probs=60.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe-C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE-N 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid-~ 229 (342)
-.|.++.|.|. |.||++.++.++.+|.+|+...++.. .+..+ ..++.++ ++.+.+++ .|++.- |
T Consensus 144 l~gktvGIiG~-GrIG~avA~r~~~Fgm~v~y~~~~~~-~~~~~-~~~~~y~-------~l~ell~~-----sDii~l~~ 208 (324)
T COG1052 144 LRGKTLGIIGL-GRIGQAVARRLKGFGMKVLYYDRSPN-PEAEK-ELGARYV-------DLDELLAE-----SDIISLHC 208 (324)
T ss_pred CCCCEEEEECC-CHHHHHHHHHHhcCCCEEEEECCCCC-hHHHh-hcCceec-------cHHHHHHh-----CCEEEEeC
Confidence 35889999995 99999999999999999999998875 23333 4444332 33334433 677654 3
Q ss_pred CChh-h----HHHHHHhhhhCCEEEEEce
Q 019332 230 VGGK-M----LDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~~-~----~~~~~~~l~~~G~~v~~g~ 253 (342)
-..+ + -...+..+++++.+|.++-
T Consensus 209 Plt~~T~hLin~~~l~~mk~ga~lVNtaR 237 (324)
T COG1052 209 PLTPETRHLINAEELAKMKPGAILVNTAR 237 (324)
T ss_pred CCChHHhhhcCHHHHHhCCCCeEEEECCC
Confidence 3333 1 2356778888888888764
|
|
| >TIGR02197 heptose_epim ADP-L-glycero-D-manno-heptose-6-epimerase | Back alignment and domain information |
|---|
Probab=95.15 E-value=0.075 Score=47.08 Aligned_cols=73 Identities=12% Similarity=0.106 Sum_probs=44.9
Q ss_pred EEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeE-ecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAF-NYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
|||+||+|.+|..+++.+...|. +|+++.+..... .+. +++...+. +..+. +..+.+.+....++|+|+.+++
T Consensus 1 ilItGatG~iG~~l~~~L~~~g~~~v~~~~~~~~~~-~~~-~~~~~~~~~d~~~~-~~~~~~~~~~~~~~D~vvh~A~ 75 (314)
T TIGR02197 1 IIVTGGAGFIGSNLVKALNERGITDILVVDNLRDGH-KFL-NLADLVIADYIDKE-DFLDRLEKGAFGKIEAIFHQGA 75 (314)
T ss_pred CEEeCCcchhhHHHHHHHHHcCCceEEEEecCCCch-hhh-hhhheeeeccCcch-hHHHHHHhhccCCCCEEEECcc
Confidence 68999999999999999999998 788876544322 222 22221111 22222 3333333311136999999987
|
This family consists of examples of ADP-L-glycero-D-mannoheptose-6-epimerase, an enzyme involved in biosynthesis of the inner core of lipopolysaccharide (LPS) for Gram-negative bacteria. This enzyme is homologous to UDP-glucose 4-epimerase (TIGR01179) and belongs to the NAD dependent epimerase/dehydratase family (pfam01370). |
| >COG1179 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 [Coenzyme metabolism] | Back alignment and domain information |
|---|
Probab=95.14 E-value=0.27 Score=41.14 Aligned_cols=104 Identities=11% Similarity=0.090 Sum_probs=59.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh------hhH-HHHHHHcCC---------------CeeEecCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK------DKI-DLLKNKFGF---------------DEAFNYKEE 208 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~------~~~-~~~~~~~g~---------------~~v~~~~~~ 208 (342)
+...|+|.|. ||+|.+++..+...|. ++..++-++ +|+ ..+....|- .--++..+.
T Consensus 29 ~~~~V~VvGi-GGVGSw~veALaRsGig~itlID~D~v~vTN~NRQi~A~~~~iGk~Kv~vm~eri~~InP~c~V~~~~~ 107 (263)
T COG1179 29 KQAHVCVVGI-GGVGSWAVEALARSGIGRITLIDMDDVCVTNTNRQIHALLGDIGKPKVEVMKERIKQINPECEVTAIND 107 (263)
T ss_pred hhCcEEEEec-CchhHHHHHHHHHcCCCeEEEEecccccccccchhhHhhhhhcccHHHHHHHHHHHhhCCCceEeehHh
Confidence 3478999997 9999999999999998 766665332 221 111001221 100111111
Q ss_pred hhHHHHHHHHCCCCccEEEeCCCh-hh-HHHHHHhhhhCCEEEEEceecc
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGG-KM-LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~-~~-~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.-..+.+.++...++|+|+||... .. ...+..|.+.+=.++..+..++
T Consensus 108 f~t~en~~~~~~~~~DyvIDaiD~v~~Kv~Li~~c~~~ki~vIss~Gag~ 157 (263)
T COG1179 108 FITEENLEDLLSKGFDYVIDAIDSVRAKVALIAYCRRNKIPVISSMGAGG 157 (263)
T ss_pred hhCHhHHHHHhcCCCCEEEEchhhhHHHHHHHHHHHHcCCCEEeeccccC
Confidence 012233445555589999999998 33 2333345555556776665444
|
|
| >PLN00198 anthocyanidin reductase; Provisional | Back alignment and domain information |
|---|
Probab=95.13 E-value=0.12 Score=46.52 Aligned_cols=38 Identities=11% Similarity=0.128 Sum_probs=32.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
.+.+|||+||+|.+|...++.+...|++|++++++..+
T Consensus 8 ~~~~vlItG~~GfIG~~l~~~L~~~g~~V~~~~r~~~~ 45 (338)
T PLN00198 8 GKKTACVIGGTGFLASLLIKLLLQKGYAVNTTVRDPEN 45 (338)
T ss_pred CCCeEEEECCchHHHHHHHHHHHHCCCEEEEEECCCCC
Confidence 36789999999999999999988889999888876543
|
|
| >PLN02662 cinnamyl-alcohol dehydrogenase family protein | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.09 Score=46.80 Aligned_cols=38 Identities=18% Similarity=0.298 Sum_probs=33.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
.+.+|||+||+|.+|...+..+...|.+|++++++.++
T Consensus 3 ~~~~ilVtGatGfIG~~l~~~L~~~g~~V~~~~r~~~~ 40 (322)
T PLN02662 3 EGKVVCVTGASGYIASWLVKLLLQRGYTVKATVRDPND 40 (322)
T ss_pred CCCEEEEECChHHHHHHHHHHHHHCCCEEEEEEcCCCc
Confidence 35789999999999999999998889999998877654
|
|
| >PRK00536 speE spermidine synthase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.084 Score=45.34 Aligned_cols=94 Identities=18% Similarity=0.057 Sum_probs=61.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH-cCC-CeeEecCCchhHHHHHHHHCCCCccEE-Ee
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK-FGF-DEAFNYKEEPDLNEALKRYFPEGIDIY-FE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~-~g~-~~v~~~~~~~~~~~~i~~~~~~~~d~v-id 228 (342)
+.++|||.| ||=|.++-.++|+.. +|..+..+++=.+.++ + +.. ...++...- .+...+.+...+.+|+| +|
T Consensus 72 ~pk~VLIiG--GGDGg~~REvLkh~~-~v~mVeID~~Vv~~~k-~~lP~~~~~~~DpRv-~l~~~~~~~~~~~fDVIIvD 146 (262)
T PRK00536 72 ELKEVLIVD--GFDLELAHQLFKYDT-HVDFVQADEKILDSFI-SFFPHFHEVKNNKNF-THAKQLLDLDIKKYDLIICL 146 (262)
T ss_pred CCCeEEEEc--CCchHHHHHHHCcCC-eeEEEECCHHHHHHHH-HHCHHHHHhhcCCCE-EEeehhhhccCCcCCEEEEc
Confidence 347899999 566777888888865 9999998887767777 4 221 111222111 22223333333469986 56
Q ss_pred CCCh-hhHHHHHHhhhhCCEEEE
Q 019332 229 NVGG-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 229 ~~g~-~~~~~~~~~l~~~G~~v~ 250 (342)
+.-. +.+..+.++|+++|.++.
T Consensus 147 s~~~~~fy~~~~~~L~~~Gi~v~ 169 (262)
T PRK00536 147 QEPDIHKIDGLKRMLKEDGVFIS 169 (262)
T ss_pred CCCChHHHHHHHHhcCCCcEEEE
Confidence 4444 677899999999999885
|
|
| >PRK08655 prephenate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=95.12 E-value=0.24 Score=46.27 Aligned_cols=44 Identities=23% Similarity=0.361 Sum_probs=36.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHcCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI-DLLKNKFGF 199 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~-~~~~~~~g~ 199 (342)
+|+|+||.|.+|.+.+..++..|.+|++.++++++. +.+. ++|+
T Consensus 2 kI~IIGG~G~mG~slA~~L~~~G~~V~v~~r~~~~~~~~a~-~~gv 46 (437)
T PRK08655 2 KISIIGGTGGLGKWFARFLKEKGFEVIVTGRDPKKGKEVAK-ELGV 46 (437)
T ss_pred EEEEEecCCHHHHHHHHHHHHCCCEEEEEECChHHHHHHHH-HcCC
Confidence 688999779999999999999999999999887764 3344 6665
|
|
| >PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate | Back alignment and domain information |
|---|
Probab=95.11 E-value=0.25 Score=37.12 Aligned_cols=90 Identities=19% Similarity=0.156 Sum_probs=51.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChh-hHHHHHHHcC----C-CeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKD-KIDLLKNKFG----F-DEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~-~~~~~~~~~g----~-~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
+|.|+||+|-+|..+++++... .++++.+.++.. ....+...++ . +-.+...+. +.+ ..+|+||
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~~e~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~----~~~-----~~~Dvvf 71 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPDFELVALVSSSRSAGKPLSEVFPHPKGFEDLSVEDADP----EEL-----SDVDVVF 71 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTSTEEEEEEEESTTTTTSBHHHTTGGGTTTEEEBEEETSG----HHH-----TTESEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCCccEEEeeeeccccCCeeehhccccccccceeEeecch----hHh-----hcCCEEE
Confidence 5899999999999999988765 456655554443 2222221222 1 111221111 112 3499999
Q ss_pred eCCChhhHHHHHHhh-hhCCEEEEEce
Q 019332 228 ENVGGKMLDAVLLNM-KIHGRIAVCGM 253 (342)
Q Consensus 228 d~~g~~~~~~~~~~l-~~~G~~v~~g~ 253 (342)
.|.+..........+ +++-+++..+.
T Consensus 72 ~a~~~~~~~~~~~~~~~~g~~ViD~s~ 98 (121)
T PF01118_consen 72 LALPHGASKELAPKLLKAGIKVIDLSG 98 (121)
T ss_dssp E-SCHHHHHHHHHHHHHTTSEEEESSS
T ss_pred ecCchhHHHHHHHHHhhCCcEEEeCCH
Confidence 999996555555544 55556766543
|
This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C .... |
| >PRK14191 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=95.10 E-value=0.31 Score=42.31 Aligned_cols=93 Identities=20% Similarity=0.083 Sum_probs=62.8
Q ss_pred CCchhhHHHhhhhhcCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 134 GMPGMTAYAGFYEVCSP-KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~-~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
|+.....+..| +..++ -.|.+|+|.|.+..+|.-++.++...||.|++..+. . . ++.
T Consensus 138 PcTp~avi~lL-~~~~i~l~Gk~vvVvGrs~~VG~Pla~lL~~~gAtVtv~hs~-t-------------------~-~l~ 195 (285)
T PRK14191 138 PATPMGVMRLL-KHYHIEIKGKDVVIIGASNIVGKPLAMLMLNAGASVSVCHIL-T-------------------K-DLS 195 (285)
T ss_pred CCcHHHHHHHH-HHhCCCCCCCEEEEECCCchhHHHHHHHHHHCCCEEEEEeCC-c-------------------H-HHH
Confidence 43333333333 33344 368999999997799999999999999998875422 1 1 333
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEcee
Q 019332 213 EALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+.+++ +|+++-++|...+- --+.++++..++.+|..
T Consensus 196 ~~~~~-----ADIvV~AvG~p~~i-~~~~vk~GavVIDvGi~ 231 (285)
T PRK14191 196 FYTQN-----ADIVCVGVGKPDLI-KASMVKKGAVVVDIGIN 231 (285)
T ss_pred HHHHh-----CCEEEEecCCCCcC-CHHHcCCCcEEEEeecc
Confidence 33333 79999999985432 24577999999999863
|
|
| >PLN02696 1-deoxy-D-xylulose-5-phosphate reductoisomerase | Back alignment and domain information |
|---|
Probab=95.09 E-value=0.47 Score=43.81 Aligned_cols=96 Identities=14% Similarity=0.080 Sum_probs=62.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCCh--hhHHHHHHHcCCCeeEecCCchhHHH----------------
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSK--DKIDLLKNKFGFDEAFNYKEEPDLNE---------------- 213 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~--~~~~~~~~~~g~~~v~~~~~~~~~~~---------------- 213 (342)
.+|.|.|++|.||..++++.+.. .++|++..-.. +.+....++|....+.-.++ ....
T Consensus 58 KkI~ILGSTGSIGtqtLdVI~~~pd~f~vvaLaag~Ni~lL~~q~~~f~p~~v~v~d~--~~~~~l~~~l~~~~~~~~vl 135 (454)
T PLN02696 58 KPISLLGSTGSIGTQTLDIVAENPDKFKVVALAAGSNVTLLADQVRKFKPKLVAVRNE--SLVDELKEALADLDDKPEII 135 (454)
T ss_pred cEEEEecCCcHhhHHHHHHHHhCccccEEEEEECCCCHHHHHHHHHHhCCCEEEEcCH--HHHHHHHHhhcCCCCCcEEE
Confidence 58999999999999999998865 45776665433 23322222677665544332 2222
Q ss_pred ----HHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 214 ----ALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 214 ----~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
.+.++... .+|+|+++.+| ..+...+..++.|-++.+.
T Consensus 136 ~G~egl~~la~~~evDiVV~AIvG~aGL~pTl~AIkaGK~VALA 179 (454)
T PLN02696 136 PGEEGIVEVARHPEAVTVVTGIVGCAGLKPTVAAIEAGKDIALA 179 (454)
T ss_pred ECHHHHHHHHcCCCCCEEEEeCccccchHHHHHHHHCCCcEEEe
Confidence 22232223 58999999998 6777778888888776544
|
|
| >PRK11908 NAD-dependent epimerase/dehydratase family protein; Provisional | Back alignment and domain information |
|---|
Probab=95.02 E-value=0.14 Score=46.31 Aligned_cols=72 Identities=18% Similarity=0.166 Sum_probs=44.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeE--ecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAF--NYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|-+|..+++.+... |.+|++++++..+...+....+. +++ |..+. .+.+.+... ++|+||.+++
T Consensus 3 ~ilVtGatGfiGs~l~~~L~~~~~~~V~~~~r~~~~~~~~~~~~~~-~~~~~Dl~~~---~~~~~~~~~-~~d~ViH~aa 77 (347)
T PRK11908 3 KVLILGVNGFIGHHLSKRILETTDWEVYGMDMQTDRLGDLVNHPRM-HFFEGDITIN---KEWIEYHVK-KCDVILPLVA 77 (347)
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCCeEEEEeCcHHHHHHhccCCCe-EEEeCCCCCC---HHHHHHHHc-CCCEEEECcc
Confidence 6999999999999988888665 68999998766543322201111 222 22211 122333322 4999999875
|
|
| >PLN02650 dihydroflavonol-4-reductase | Back alignment and domain information |
|---|
Probab=95.01 E-value=0.16 Score=45.92 Aligned_cols=40 Identities=20% Similarity=0.189 Sum_probs=34.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHH
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~ 192 (342)
..+|||+||+|.+|..++..+...|.+|++++++.++.+.
T Consensus 5 ~k~iLVTGatGfIGs~l~~~L~~~G~~V~~~~r~~~~~~~ 44 (351)
T PLN02650 5 KETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPANVKK 44 (351)
T ss_pred CCEEEEeCCcHHHHHHHHHHHHHCCCEEEEEEcCcchhHH
Confidence 4589999999999999999888889999998887655443
|
|
| >TIGR01777 yfcH conserved hypothetical protein TIGR01777 | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.022 Score=49.88 Aligned_cols=67 Identities=19% Similarity=0.145 Sum_probs=44.8
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
|||+||+|.+|..+++.+...|.+|+++++++.+..... ..+. .+.... .. .+.. .++|+|+.|++.
T Consensus 1 vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~---~~~~~~-~~----~~~~-~~~D~Vvh~a~~ 67 (292)
T TIGR01777 1 ILITGGTGFIGRALTQRLTKDGHEVTILTRSPPAGANTK-WEGY---KPWAPL-AE----SEAL-EGADAVINLAGE 67 (292)
T ss_pred CEEEcccchhhHHHHHHHHHcCCEEEEEeCCCCCCCccc-ceee---eccccc-ch----hhhc-CCCCEEEECCCC
Confidence 689999999999999988888999999998876543222 1111 111111 11 1111 259999999974
|
This model represents a clade of proteins of unknown function including the E. coli yfcH protein. |
| >PRK08762 molybdopterin biosynthesis protein MoeB; Validated | Back alignment and domain information |
|---|
Probab=94.99 E-value=0.3 Score=44.70 Aligned_cols=34 Identities=15% Similarity=0.146 Sum_probs=29.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS 186 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s 186 (342)
.+.+|+|.|+ |++|..++..+...|. +++.++.+
T Consensus 134 ~~~~VlvvG~-GG~Gs~ia~~La~~Gvg~i~lvD~d 168 (376)
T PRK08762 134 LEARVLLIGA-GGLGSPAALYLAAAGVGTLGIVDHD 168 (376)
T ss_pred hcCcEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCC
Confidence 4568999996 9999999999999999 78888766
|
|
| >COG3288 PntA NAD/NADP transhydrogenase alpha subunit [Energy production and conversion] | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.19 Score=43.53 Aligned_cols=149 Identities=16% Similarity=0.111 Sum_probs=92.5
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCC-------c--hhHHHHHHHHC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKE-------E--PDLNEALKRYF 219 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~-------~--~~~~~~i~~~~ 219 (342)
-.++.++++.|+ |.+|++++..++..|+-|....-...+.+..+ ++|+... ++..+ + .+|..+=.++.
T Consensus 161 tv~pA~vlv~G~-Gvagl~aiata~~lG~iVt~rdlrm~~Keqv~-s~Ga~f~~~~~ee~~gGYAk~ms~~~~~~q~~~~ 238 (356)
T COG3288 161 TVSPAKVLVIGA-GVAGLAAIATAVRLGAIVTARDLRMFKKEQVE-SLGAKFLAVEDEESAGGYAKEMSEEFIAKQAELV 238 (356)
T ss_pred cccchhhhhhhH-HHHHHHHHHHHhhcceEEehhhhhhHHhhhhh-hcccccccccccccCCCccccCCHHHHHHHHHHH
Confidence 345678899997 99999999999999999998888887777777 7887432 11100 0 12322222222
Q ss_pred C---CCccEEEeCCCh---h----hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeeccee-ccc--
Q 019332 220 P---EGIDIYFENVGG---K----MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV-RDY-- 286 (342)
Q Consensus 220 ~---~~~d~vid~~g~---~----~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~-- 286 (342)
. .++|+||-+.=- + ........++||..+|.+....+.|-.... .......++.++.|..- ...
T Consensus 239 a~~~~~~DivITTAlIPGrpAP~Lvt~~mv~sMkpGSViVDlAa~~GGNce~t~---pg~~v~~~gV~iig~~nlp~r~a 315 (356)
T COG3288 239 AEQAKEVDIVITTALIPGRPAPKLVTAEMVASMKPGSVIVDLAAETGGNCELTE---PGKVVTKNGVKIIGYTNLPGRLA 315 (356)
T ss_pred HHHhcCCCEEEEecccCCCCCchhhHHHHHHhcCCCcEEEEehhhcCCCccccc---CCeEEEeCCeEEEeecCcchhhh
Confidence 1 269999986532 1 345677899999999998876665443222 22233456677777432 111
Q ss_pred ---ccchHHHHHHHHHHHHc
Q 019332 287 ---YHLYPKFLEMIIPHIKE 303 (342)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~ 303 (342)
...|.+.+-.+++++-+
T Consensus 316 ~~aS~LYa~Nl~~~l~ll~~ 335 (356)
T COG3288 316 AQASQLYATNLVNLLKLLCK 335 (356)
T ss_pred hhHHHHHHHHHHHHHHHHhc
Confidence 33455556666666554
|
|
| >PRK08317 hypothetical protein; Provisional | Back alignment and domain information |
|---|
Probab=94.98 E-value=0.16 Score=42.84 Aligned_cols=102 Identities=19% Similarity=0.268 Sum_probs=65.8
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHc-CCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKF-GFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
+...+.++++||-.|. |.|..+..+++.. +.++++++.+++..+.+++.. .....+..... +... . ....+.
T Consensus 13 ~~~~~~~~~~vLdiG~--G~G~~~~~~a~~~~~~~~v~~~d~~~~~~~~a~~~~~~~~~~~~~~~~-d~~~-~-~~~~~~ 87 (241)
T PRK08317 13 ELLAVQPGDRVLDVGC--GPGNDARELARRVGPEGRVVGIDRSEAMLALAKERAAGLGPNVEFVRG-DADG-L-PFPDGS 87 (241)
T ss_pred HHcCCCCCCEEEEeCC--CCCHHHHHHHHhcCCCcEEEEEeCCHHHHHHHHHHhhCCCCceEEEec-cccc-C-CCCCCC
Confidence 4567889999999995 3488888999876 359999999998888777321 11111111111 1110 0 112236
Q ss_pred ccEEEeCC-----Ch--hhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENV-----GG--KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~-----g~--~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+|+-.. .. ..+..+.++|+++|.++...
T Consensus 88 ~D~v~~~~~~~~~~~~~~~l~~~~~~L~~gG~l~~~~ 124 (241)
T PRK08317 88 FDAVRSDRVLQHLEDPARALAEIARVLRPGGRVVVLD 124 (241)
T ss_pred ceEEEEechhhccCCHHHHHHHHHHHhcCCcEEEEEe
Confidence 88877532 22 46788999999999998765
|
|
| >PRK14192 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.97 E-value=0.32 Score=42.46 Aligned_cols=79 Identities=16% Similarity=0.133 Sum_probs=55.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
--.|.+|+|.|.++-+|...+.++...|++|++..+.. . ++.+.+ .++|+++++
T Consensus 156 ~l~Gk~vvViG~gg~vGkpia~~L~~~gatVtv~~~~t---~------------------~L~~~~-----~~aDIvI~A 209 (283)
T PRK14192 156 ELAGKHAVVVGRSAILGKPMAMMLLNANATVTICHSRT---Q------------------NLPELV-----KQADIIVGA 209 (283)
T ss_pred CCCCCEEEEECCcHHHHHHHHHHHHhCCCEEEEEeCCc---h------------------hHHHHh-----ccCCEEEEc
Confidence 35788999999855599999999999999777665411 1 222222 138999999
Q ss_pred CChhhHHHHHHhhhhCCEEEEEceec
Q 019332 230 VGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 230 ~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|.+.+ --.+.++++-.++.+|...
T Consensus 210 tG~~~~-v~~~~lk~gavViDvg~n~ 234 (283)
T PRK14192 210 VGKPEL-IKKDWIKQGAVVVDAGFHP 234 (283)
T ss_pred cCCCCc-CCHHHcCCCCEEEEEEEee
Confidence 987432 2235688988888888643
|
|
| >PRK08287 cobalt-precorrin-6Y C(15)-methyltransferase; Validated | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.76 Score=37.37 Aligned_cols=98 Identities=16% Similarity=0.238 Sum_probs=62.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
....+.++.+||=.| +|.|..++.+++.. +.+|++++.+++..+.+++ +++... +..... +... ...+
T Consensus 25 ~~l~~~~~~~vLDiG--~G~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~n~~~~~~~~-i~~~~~-d~~~----~~~~ 96 (187)
T PRK08287 25 SKLELHRAKHLIDVG--AGTGSVSIEAALQFPSLQVTAIERNPDALRLIKENRQRFGCGN-IDIIPG-EAPI----ELPG 96 (187)
T ss_pred HhcCCCCCCEEEEEC--CcCCHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHhCCCC-eEEEec-Cchh----hcCc
Confidence 334567888998888 45577777888765 4699999999887666653 234322 111111 2111 1123
Q ss_pred CccEEEeCCCh----hhHHHHHHhhhhCCEEEEE
Q 019332 222 GIDIYFENVGG----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 222 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~ 251 (342)
.+|+|+..... ..+..+.+.|+++|+++..
T Consensus 97 ~~D~v~~~~~~~~~~~~l~~~~~~Lk~gG~lv~~ 130 (187)
T PRK08287 97 KADAIFIGGSGGNLTAIIDWSLAHLHPGGRLVLT 130 (187)
T ss_pred CCCEEEECCCccCHHHHHHHHHHhcCCCeEEEEE
Confidence 69998854321 3567788999999998764
|
|
| >PRK08125 bifunctional UDP-glucuronic acid decarboxylase/UDP-4-amino-4-deoxy-L-arabinose formyltransferase; Validated | Back alignment and domain information |
|---|
Probab=94.94 E-value=0.12 Score=51.17 Aligned_cols=77 Identities=17% Similarity=0.124 Sum_probs=48.1
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeE--ecCCchhHHHHHHHHCCCCccEE
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAF--NYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
..++.+|||+||+|-+|..+++.+... |.+|+++++...........-+. +.+ |..+. ...+++... ++|+|
T Consensus 312 ~~~~~~VLVTGatGFIGs~Lv~~Ll~~~g~~V~~l~r~~~~~~~~~~~~~~-~~~~gDl~d~---~~~l~~~l~-~~D~V 386 (660)
T PRK08125 312 AKRRTRVLILGVNGFIGNHLTERLLRDDNYEVYGLDIGSDAISRFLGHPRF-HFVEGDISIH---SEWIEYHIK-KCDVV 386 (660)
T ss_pred hhcCCEEEEECCCchHHHHHHHHHHhCCCcEEEEEeCCchhhhhhcCCCce-EEEeccccCc---HHHHHHHhc-CCCEE
Confidence 457789999999999999999887764 78999999866433222101111 122 22221 112333322 49999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
|.+++
T Consensus 387 iHlAa 391 (660)
T PRK08125 387 LPLVA 391 (660)
T ss_pred EECcc
Confidence 99876
|
|
| >PLN03013 cysteine synthase | Back alignment and domain information |
|---|
Probab=94.91 E-value=0.75 Score=42.54 Aligned_cols=107 Identities=17% Similarity=0.184 Sum_probs=68.2
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEec-----------------
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNY----------------- 205 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~----------------- 205 (342)
+.+.+.+|.+.+|...+|..|++++..|+.+|.+++++.. +++|.+.++ .+|++-++..
T Consensus 167 ~~G~l~pG~~~VVeaSSGN~G~ALA~~a~~~G~~~~VvvP~~~s~~K~~~ir-a~GAeVi~v~~~~~~~~a~~~A~ela~ 245 (429)
T PLN03013 167 QKGFISPGKSVLVEPTSGNTGIGLAFIAASRGYRLILTMPASMSMERRVLLK-AFGAELVLTDPAKGMTGAVQKAEEILK 245 (429)
T ss_pred HcCCcCCCCcEEEEECCcHHHHHHHHHHHHcCCCEEEEECCCCcHHHHHHHH-HcCCEEEEECCCCChHHHHHHHHHHHh
Confidence 3466788866778888899999999999999997777654 456777777 8887432211
Q ss_pred -----------CCchh-------HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhh---CCEEEEEce
Q 019332 206 -----------KEEPD-------LNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKI---HGRIAVCGM 253 (342)
Q Consensus 206 -----------~~~~~-------~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~---~G~~v~~g~ 253 (342)
+++.+ ...+|.+..++.+|.++-++|+ ..+.-..+.++. +=+++.+..
T Consensus 246 ~~~g~~~~~qy~Np~n~~ah~~ttg~EI~eq~~~~~D~vV~~vGtGGtisGiar~lKe~~P~vkVigVep 315 (429)
T PLN03013 246 NTPDAYMLQQFDNPANPKIHYETTGPEIWDDTKGKVDIFVAGIGTGGTITGVGRFIKEKNPKTQVIGVEP 315 (429)
T ss_pred hcCCeEeCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCEEEEeCCccHHHHHHHHHHHhhCCCCEEEEEEe
Confidence 01001 1133444344468888888887 555555555554 335655544
|
|
| >TIGR00477 tehB tellurite resistance protein TehB | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.1 Score=42.86 Aligned_cols=99 Identities=12% Similarity=0.080 Sum_probs=59.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
......++.+||-.| .|.|..+..+++ .|.+|++++.+++-.+.+++ ..+.. +..... ++.. . . ..+.
T Consensus 24 ~~~~~~~~~~vLDiG--cG~G~~a~~la~-~g~~V~~iD~s~~~l~~a~~~~~~~~~~--v~~~~~-d~~~-~-~-~~~~ 94 (195)
T TIGR00477 24 EAVKTVAPCKTLDLG--CGQGRNSLYLSL-AGYDVRAWDHNPASIASVLDMKARENLP--LRTDAY-DINA-A-A-LNED 94 (195)
T ss_pred HHhccCCCCcEEEeC--CCCCHHHHHHHH-CCCeEEEEECCHHHHHHHHHHHHHhCCC--ceeEec-cchh-c-c-ccCC
Confidence 334445567899888 467888888887 48899999999875555542 22322 111111 1110 0 1 1235
Q ss_pred ccEEEeCCC-----h----hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFENVG-----G----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+|+.+.- . ..+..+.++|+++|.++.+..
T Consensus 95 fD~I~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lli~~~ 134 (195)
T TIGR00477 95 YDFIFSTVVFMFLQAGRVPEIIANMQAHTRPGGYNLIVAA 134 (195)
T ss_pred CCEEEEecccccCCHHHHHHHHHHHHHHhCCCcEEEEEEe
Confidence 898875421 1 356778889999999665543
|
Part of a tellurite-reducing operon tehA and tehB |
| >TIGR01181 dTDP_gluc_dehyt dTDP-glucose 4,6-dehydratase | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.098 Score=46.27 Aligned_cols=73 Identities=12% Similarity=0.134 Sum_probs=44.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCCh--hhHHHHHHHcCC---CeeE--ecCCchhHHHHHHHHCCC-Ccc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSK--DKIDLLKNKFGF---DEAF--NYKEEPDLNEALKRYFPE-GID 224 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~--~~~~~~~~~~g~---~~v~--~~~~~~~~~~~i~~~~~~-~~d 224 (342)
+|||+||+|.+|..+++.+...| .+|++..+.. .+.+.+. .+.. ..++ |..+. +.+.+...+ .+|
T Consensus 1 ~ilItGatG~iG~~l~~~l~~~~~~~~v~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~Dl~~~----~~~~~~~~~~~~d 75 (317)
T TIGR01181 1 RILVTGGAGFIGSNFVRYILNEHPDAEVIVLDKLTYAGNLENLA-DLEDNPRYRFVKGDIGDR----ELVSRLFTEHQPD 75 (317)
T ss_pred CEEEEcCCchHHHHHHHHHHHhCCCCEEEEecCCCcchhhhhhh-hhccCCCcEEEEcCCcCH----HHHHHHHhhcCCC
Confidence 48999999999999999776665 6888876432 1222222 2211 1222 33333 233333333 589
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+||++++.
T Consensus 76 ~vi~~a~~ 83 (317)
T TIGR01181 76 AVVHFAAE 83 (317)
T ss_pred EEEEcccc
Confidence 99999974
|
This protein is related to UDP-glucose 4-epimerase (GalE) and likewise has an NAD cofactor. |
| >PF07991 IlvN: Acetohydroxy acid isomeroreductase, catalytic domain; InterPro: IPR013116 Acetohydroxy acid isomeroreductase catalyses the conversion of acetohydroxy acids into dihydroxy valerates | Back alignment and domain information |
|---|
Probab=94.90 E-value=0.55 Score=36.93 Aligned_cols=85 Identities=16% Similarity=0.244 Sum_probs=56.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.+.+|.|+|- |.-|.+.++-++-.|.+|++..+..+ ..+.++ +-|.. +. ++.+.+++ .|+|+-.+
T Consensus 3 ~~k~IAViGy-GsQG~a~AlNLrDSG~~V~Vglr~~s~s~~~A~-~~Gf~-v~------~~~eAv~~-----aDvV~~L~ 68 (165)
T PF07991_consen 3 KGKTIAVIGY-GSQGHAHALNLRDSGVNVIVGLREGSASWEKAK-ADGFE-VM------SVAEAVKK-----ADVVMLLL 68 (165)
T ss_dssp CTSEEEEES--SHHHHHHHHHHHHCC-EEEEEE-TTCHHHHHHH-HTT-E-CC------EHHHHHHC------SEEEE-S
T ss_pred CCCEEEEECC-ChHHHHHHHHHHhCCCCEEEEecCCCcCHHHHH-HCCCe-ec------cHHHHHhh-----CCEEEEeC
Confidence 4689999996 89999999999999999998888776 667777 77873 22 44555553 79999888
Q ss_pred ChhhH-----HHHHHhhhhCCEEEE
Q 019332 231 GGKML-----DAVLLNMKIHGRIAV 250 (342)
Q Consensus 231 g~~~~-----~~~~~~l~~~G~~v~ 250 (342)
..+.. +...+.|+++-.+++
T Consensus 69 PD~~q~~vy~~~I~p~l~~G~~L~f 93 (165)
T PF07991_consen 69 PDEVQPEVYEEEIAPNLKPGATLVF 93 (165)
T ss_dssp -HHHHHHHHHHHHHHHS-TT-EEEE
T ss_pred ChHHHHHHHHHHHHhhCCCCCEEEe
Confidence 76543 344556777766554
|
This reaction is the second in the synthetic pathway of the essential branched side chain amino acids valine and isoleucine.; GO: 0004455 ketol-acid reductoisomerase activity, 0008652 cellular amino acid biosynthetic process, 0055114 oxidation-reduction process; PDB: 1QMG_A 1YVE_J 3FR8_B 3FR7_A 1NP3_C 1YRL_C. |
| >PRK10792 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional | Back alignment and domain information |
|---|
Probab=94.89 E-value=0.37 Score=41.84 Aligned_cols=93 Identities=17% Similarity=0.096 Sum_probs=64.1
Q ss_pred cCCchhhHHHhhhhhcCC-CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhH
Q 019332 133 LGMPGMTAYAGFYEVCSP-KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDL 211 (342)
Q Consensus 133 l~~~~~ta~~al~~~~~~-~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 211 (342)
.||.....+..| +..++ -.|.+++|.|-+.-+|.-+..++...||.|++..+... ++
T Consensus 139 ~PcTp~av~~ll-~~~~i~l~Gk~vvViGrs~iVG~Pla~lL~~~~atVtv~hs~T~---------------------~l 196 (285)
T PRK10792 139 RPCTPRGIMTLL-ERYGIDTYGLNAVVVGASNIVGRPMSLELLLAGCTVTVCHRFTK---------------------NL 196 (285)
T ss_pred CCCCHHHHHHHH-HHcCCCCCCCEEEEECCCcccHHHHHHHHHHCCCeEEEEECCCC---------------------CH
Confidence 344433334444 33333 36899999999788999999999999999887764311 33
Q ss_pred HHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEce
Q 019332 212 NEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 212 ~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+++ +|+++.++|.+.+- --+.++++..++.+|.
T Consensus 197 ~~~~~~-----ADIvi~avG~p~~v-~~~~vk~gavVIDvGi 232 (285)
T PRK10792 197 RHHVRN-----ADLLVVAVGKPGFI-PGEWIKPGAIVIDVGI 232 (285)
T ss_pred HHHHhh-----CCEEEEcCCCcccc-cHHHcCCCcEEEEccc
Confidence 333332 89999999984432 2378899999999985
|
|
| >PLN03139 formate dehydrogenase; Provisional | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.2 Score=45.67 Aligned_cols=89 Identities=25% Similarity=0.210 Sum_probs=57.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++.+|.+|++..++....+... +.|+... + ++.+.+.+ .|+|+.+..
T Consensus 198 ~gktVGIVG~-G~IG~~vA~~L~afG~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----sDvV~l~lP 264 (386)
T PLN03139 198 EGKTVGTVGA-GRIGRLLLQRLKPFNCNLLYHDRLKMDPELEK-ETGAKFE----E--DLDAMLPK-----CDVVVINTP 264 (386)
T ss_pred CCCEEEEEee-cHHHHHHHHHHHHCCCEEEEECCCCcchhhHh-hcCceec----C--CHHHHHhh-----CCEEEEeCC
Confidence 5779999996 99999999999999999999887654333333 4554211 1 33333322 677766665
Q ss_pred h-hh-----HHHHHHhhhhCCEEEEEce
Q 019332 232 G-KM-----LDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~~-----~~~~~~~l~~~G~~v~~g~ 253 (342)
. +. -...+..|+++..+|+++.
T Consensus 265 lt~~T~~li~~~~l~~mk~ga~lIN~aR 292 (386)
T PLN03139 265 LTEKTRGMFNKERIAKMKKGVLIVNNAR 292 (386)
T ss_pred CCHHHHHHhCHHHHhhCCCCeEEEECCC
Confidence 3 21 1245667777777766653
|
|
| >PRK05579 bifunctional phosphopantothenoylcysteine decarboxylase/phosphopantothenate synthase; Validated | Back alignment and domain information |
|---|
Probab=94.87 E-value=0.16 Score=46.64 Aligned_cols=75 Identities=20% Similarity=0.292 Sum_probs=52.5
Q ss_pred CCCEEEEecC----------------CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 152 QGECVFISAA----------------SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 152 ~~~~vlI~ga----------------~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
.|.++||+|| +|.+|.+.++.+...|++|+.+.++.+ .+. ..+. ..++..+..++.+.+
T Consensus 187 ~gk~vlITgG~T~E~ID~VR~isN~SSG~~G~aiA~~l~~~Ga~V~~v~~~~~-~~~---~~~~-~~~dv~~~~~~~~~v 261 (399)
T PRK05579 187 AGKRVLITAGPTREPIDPVRYITNRSSGKMGYALARAAARRGADVTLVSGPVN-LPT---PAGV-KRIDVESAQEMLDAV 261 (399)
T ss_pred CCCEEEEeCCCccccccceeeeccCCcchHHHHHHHHHHHCCCEEEEeCCCcc-ccC---CCCc-EEEccCCHHHHHHHH
Confidence 6789999999 666999999999999999999987642 111 1122 334554433555555
Q ss_pred HHHCCCCccEEEeCCCh
Q 019332 216 KRYFPEGIDIYFENVGG 232 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~ 232 (342)
.+.. +.+|+++.++|-
T Consensus 262 ~~~~-~~~DilI~~Aav 277 (399)
T PRK05579 262 LAAL-PQADIFIMAAAV 277 (399)
T ss_pred HHhc-CCCCEEEEcccc
Confidence 5443 359999999885
|
|
| >PRK13255 thiopurine S-methyltransferase; Reviewed | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.13 Score=43.19 Aligned_cols=98 Identities=11% Similarity=0.067 Sum_probs=60.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--------------EecCCchhHHHH
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--------------FNYKEEPDLNEA 214 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--------------~~~~~~~~~~~~ 214 (342)
.+.++.+||+.| .|.|.-++-||. .|++|++++.++.-.+.+.++.+.... ++.... |+-+.
T Consensus 34 ~~~~~~rvL~~g--CG~G~da~~LA~-~G~~V~avD~s~~Ai~~~~~~~~l~~~~~~~~~~~~~~~~~v~~~~~-D~~~l 109 (218)
T PRK13255 34 ALPAGSRVLVPL--CGKSLDMLWLAE-QGHEVLGVELSELAVEQFFAENGLTPQTRQSGEFEHYQAGEITIYCG-DFFAL 109 (218)
T ss_pred CCCCCCeEEEeC--CCChHhHHHHHh-CCCeEEEEccCHHHHHHHHHHcCCCccccccccccccccCceEEEEC-cccCC
Confidence 345678999998 577888888886 699999999998866654323333110 010000 11100
Q ss_pred HHHHCCCCccEEEeCCC---------hhhHHHHHHhhhhCCEEEEE
Q 019332 215 LKRYFPEGIDIYFENVG---------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 215 i~~~~~~~~d~vid~~g---------~~~~~~~~~~l~~~G~~v~~ 251 (342)
.....+.+|.|+|... ...+..+.++|+|+|+++.+
T Consensus 110 -~~~~~~~fd~v~D~~~~~~l~~~~R~~~~~~l~~lL~pgG~~~l~ 154 (218)
T PRK13255 110 -TAADLADVDAVYDRAALIALPEEMRERYVQQLAALLPAGCRGLLV 154 (218)
T ss_pred -CcccCCCeeEEEehHhHhhCCHHHHHHHHHHHHHHcCCCCeEEEE
Confidence 0000125899999664 13577888999999875443
|
|
| >KOG1502 consensus Flavonol reductase/cinnamoyl-CoA reductase [Defense mechanisms] | Back alignment and domain information |
|---|
Probab=94.80 E-value=0.11 Score=45.72 Aligned_cols=75 Identities=24% Similarity=0.395 Sum_probs=52.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH---HHHHHHcC-CCe---eE--ecCCchhHHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI---DLLKNKFG-FDE---AF--NYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~---~~~~~~~g-~~~---v~--~~~~~~~~~~~i~~~~~~~ 222 (342)
.+.+|+|+||+|-||...+..+...|++|.+++|++++. +.++ ++. +.. ++ |-.+...+.+.+. |
T Consensus 5 ~~~~VcVTGAsGfIgswivk~LL~rGY~V~gtVR~~~~~k~~~~L~-~l~~a~~~l~l~~aDL~d~~sf~~ai~-----g 78 (327)
T KOG1502|consen 5 EGKKVCVTGASGFIGSWIVKLLLSRGYTVRGTVRDPEDEKKTEHLR-KLEGAKERLKLFKADLLDEGSFDKAID-----G 78 (327)
T ss_pred CCcEEEEeCCchHHHHHHHHHHHhCCCEEEEEEcCcchhhhHHHHH-hcccCcccceEEeccccccchHHHHHh-----C
Confidence 567999999999999999999999999999999988753 3466 554 221 11 2222213333332 5
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|.||-++..
T Consensus 79 cdgVfH~Asp 88 (327)
T KOG1502|consen 79 CDGVFHTASP 88 (327)
T ss_pred CCEEEEeCcc
Confidence 8888877663
|
|
Homologous Structure Templates
Structure Templates Detected by BLAST
Original result of BLAST against Protein Data Bank
| ID | Alignment Graph | Length |
Definition |
E-value | |
| Query | 342 | ||||
| 4hfj_A | 351 | X-ray Crystal Structure Of A Double Bond Reductase | 1e-161 | ||
| 2j3h_A | 345 | Crystal Structure Of Arabidopsis Thaliana Double Bo | 1e-143 | ||
| 4b7c_A | 336 | Crystal Structure Of Hypothetical Protein Pa1648 Fr | 1e-64 | ||
| 1v3t_A | 333 | Crystal Structure Of Leukotriene B4 12- Hydroxydehy | 6e-62 | ||
| 2y05_A | 328 | Crystal Structure Of Human Leukotriene B4 12-Hydrox | 4e-58 | ||
| 1zsv_A | 349 | Crystal Structure Of Human Nadp-Dependent Leukotrie | 4e-58 | ||
| 2zb4_A | 357 | Crystal Structure Of Human 15-Ketoprostaglandin Del | 5e-44 | ||
| 2w4q_A | 357 | Crystal Structure Of Human Zinc-Binding Alcohol Deh | 6e-44 | ||
| 2zb3_A | 353 | Crystal Structure Of Mouse 15-Ketoprostaglandin Del | 7e-42 | ||
| 1vj1_A | 363 | Crystal Structure Of Putative Nadph-Dependent Oxido | 6e-38 | ||
| 2wek_A | 341 | Crystal Structure Of The Human Mgc45594 Gene Produc | 3e-24 | ||
| 2x7h_A | 370 | Crystal Structure Of The Human Mgc45594 Gene Produc | 4e-24 | ||
| 2c0c_A | 362 | Structure Of The Mgc45594 Gene Product Length = 362 | 5e-24 | ||
| 1yb5_A | 351 | Crystal Structure Of Human Zeta-crystallin With Bou | 3e-13 | ||
| 2eih_A | 343 | Crystal Structure Of Nad-Dependent Alcohol Dehydrog | 3e-09 | ||
| 1wly_A | 333 | Crystal Structure Of 2-haloacrylate Reductase Lengt | 2e-08 | ||
| 4dup_A | 353 | Crystal Structure Of A Quinone Oxidoreductase From | 3e-08 | ||
| 2oby_A | 338 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 1e-07 | ||
| 2j8z_A | 354 | Crystal Structure Of Human P53 Inducible Oxidoreduc | 1e-07 | ||
| 3qwa_A | 334 | Crystal Structure Of Saccharomyces Cerevisiae Zeta- | 6e-07 | ||
| 1zsy_A | 357 | The Structure Of Human Mitochondrial 2-Enoyl Thioes | 3e-06 | ||
| 2vcy_A | 344 | Crystal Structure Of 2-Enoyl Thioester Reductase Of | 3e-06 | ||
| 3jyl_A | 325 | Crystal Structures Of Pseudomonas Syringae Pv. Toma | 4e-06 | ||
| 4a27_A | 349 | Crystal Structure Of Human Synaptic Vesicle Membran | 2e-05 | ||
| 2vz8_A | 2512 | Crystal Structure Of Mammalian Fatty Acid Synthase | 2e-05 | ||
| 1pqw_A | 198 | Putative Enoyl Reductase Domain Of Polyketide Synth | 5e-05 | ||
| 3uog_A | 363 | Crystal Structure Of Putative Alcohol Dehydrogenase | 1e-04 | ||
| 1qor_A | 327 | Crystal Structure Of Escherichia Coli Quinone Oxido | 2e-04 | ||
| 1xa0_A | 328 | Crystal Structure Of Mcsg Target Apc35536 From Baci | 6e-04 | ||
| 3slk_A | 795 | Structure Of Ketoreductase And Enoylreductase Didom | 6e-04 |
| >pdb|4HFJ|A Chain A, X-ray Crystal Structure Of A Double Bond Reductase From Nicotiana Tabacum Length = 351 | Back alignment and structure |
|
| >pdb|2J3H|A Chain A, Crystal Structure Of Arabidopsis Thaliana Double Bond Reductase (At5g16970)-Apo Form Length = 345 | Back alignment and structure |
|
| >pdb|4B7C|A Chain A, Crystal Structure Of Hypothetical Protein Pa1648 From Pseudomonas Aeruginosa. Length = 336 | Back alignment and structure |
|
| >pdb|1V3T|A Chain A, Crystal Structure Of Leukotriene B4 12- Hydroxydehydrogenase15-Oxo-Prostaglandin 13-Reductase Length = 333 | Back alignment and structure |
|
| >pdb|2Y05|A Chain A, Crystal Structure Of Human Leukotriene B4 12-Hydroxydehydrogenase In Complex With Nadp And Raloxifene Length = 328 | Back alignment and structure |
|
| >pdb|1ZSV|A Chain A, Crystal Structure Of Human Nadp-Dependent Leukotriene B4 12- Hydroxydehydrogenase Length = 349 | Back alignment and structure |
|
| >pdb|2ZB4|A Chain A, Crystal Structure Of Human 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadp And 15-Keto-Pge2 Length = 357 | Back alignment and structure |
|
| >pdb|2W4Q|A Chain A, Crystal Structure Of Human Zinc-Binding Alcohol Dehydrogenase 1 (Zadh1) In Ternary Complex With Nadp And 18beta-Glycyrrhetinic Acid Length = 357 | Back alignment and structure |
|
| >pdb|2ZB3|A Chain A, Crystal Structure Of Mouse 15-Ketoprostaglandin Delta-13- Reductase In Complex With Nadph Length = 353 | Back alignment and structure |
|
| >pdb|1VJ1|A Chain A, Crystal Structure Of Putative Nadph-Dependent Oxidoreductase From Mus Musculus At 2.10 A Resolution Length = 363 | Back alignment and structure |
|
| >pdb|2WEK|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Diclofenac Length = 341 | Back alignment and structure |
|
| >pdb|2X7H|A Chain A, Crystal Structure Of The Human Mgc45594 Gene Product In Complex With Fenoprofen Length = 370 | Back alignment and structure |
|
| >pdb|2C0C|A Chain A, Structure Of The Mgc45594 Gene Product Length = 362 | Back alignment and structure |
|
| >pdb|1YB5|A Chain A, Crystal Structure Of Human Zeta-crystallin With Bound Nadp Length = 351 | Back alignment and structure |
|
| >pdb|2EIH|A Chain A, Crystal Structure Of Nad-Dependent Alcohol Dehydrogenase Length = 343 | Back alignment and structure |
|
| >pdb|1WLY|A Chain A, Crystal Structure Of 2-haloacrylate Reductase Length = 333 | Back alignment and structure |
|
| >pdb|4DUP|A Chain A, Crystal Structure Of A Quinone Oxidoreductase From Rhizobium Etli Cfn 42 Length = 353 | Back alignment and structure |
|
| >pdb|2OBY|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase (Tp53i3,Pig3) Length = 338 | Back alignment and structure |
|
| >pdb|2J8Z|A Chain A, Crystal Structure Of Human P53 Inducible Oxidoreductase ( Tp53i3,Pig3) Length = 354 | Back alignment and structure |
|
| >pdb|3QWA|A Chain A, Crystal Structure Of Saccharomyces Cerevisiae Zeta-Crystallin-Like Quinone Oxidoreductase Zta1 Length = 334 | Back alignment and structure |
|
| >pdb|1ZSY|A Chain A, The Structure Of Human Mitochondrial 2-Enoyl Thioester Reductase (Cgi- 63) Length = 357 | Back alignment and structure |
|
| >pdb|2VCY|A Chain A, Crystal Structure Of 2-Enoyl Thioester Reductase Of Human Fas Ii Length = 344 | Back alignment and structure |
|
| >pdb|3JYL|A Chain A, Crystal Structures Of Pseudomonas Syringae Pv. Tomato Dc3000 Quinone Oxidoreductase Length = 325 | Back alignment and structure |
|
| >pdb|4A27|A Chain A, Crystal Structure Of Human Synaptic Vesicle Membrane Protein Vat-1 Homolog-Like Protein Length = 349 | Back alignment and structure |
|
| >pdb|2VZ8|A Chain A, Crystal Structure Of Mammalian Fatty Acid Synthase Length = 2512 | Back alignment and structure |
|
| >pdb|1PQW|A Chain A, Putative Enoyl Reductase Domain Of Polyketide Synthase Length = 198 | Back alignment and structure |
|
| >pdb|3UOG|A Chain A, Crystal Structure Of Putative Alcohol Dehydrogenase From Sinorhizobium Meliloti 1021 Length = 363 | Back alignment and structure |
|
| >pdb|1QOR|A Chain A, Crystal Structure Of Escherichia Coli Quinone Oxidoreductase Complexed With Nadph Length = 327 | Back alignment and structure |
|
| >pdb|1XA0|A Chain A, Crystal Structure Of Mcsg Target Apc35536 From Bacillus Stearothermophilus Length = 328 | Back alignment and structure |
|
| >pdb|3SLK|A Chain A, Structure Of Ketoreductase And Enoylreductase Didomain From Modular Polyketide Synthase Length = 795 | Back alignment and structure |
|
Structure Templates Detected by RPS-BLAST
Original result of RPS-BLAST against PDB70 database
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* Length = 345 | Back alignment and structure |
|---|
Score = 567 bits (1465), Expect = 0.0
Identities = 236/343 (68%), Positives = 285/343 (83%), Gaps = 5/343 (1%)
Query: 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK 64
NKQVILKDYVSGFP E+D T +++EL+VP+G+N VL+KNLYLSCDPYMR RM
Sbjct: 3 ATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMRIRMGKPD 62
Query: 65 G---SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAP--QLFKI 119
+ +++ PG PI GYGV+++++S +P++KKGDL+WG+ WEEYS++T FKI
Sbjct: 63 PSTAALAQAYTPGQPIQGYGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI 122
Query: 120 QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY 179
QHTDVPLSYYTG+LGMPGMTAYAGFYEVCSPK+GE V++SAASGAVGQLVGQ AK++GCY
Sbjct: 123 QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGETVYVSAASGAVGQLVGQLAKMMGCY 182
Query: 180 VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239
VVGSAGSK+K+DLLK KFGFD+AFNYKEE DL ALKR FP GIDIYFENVGGKMLDAVL
Sbjct: 183 VVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKMLDAVL 242
Query: 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
+NM +HGRIAVCGMISQYNL+ EGVHNL ++ KR R++GF+V D+Y Y KFLE ++P
Sbjct: 243 VNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLP 302
Query: 300 HIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
HI+EGKI YVED+A+GLE AP L+GLF G+NVGKQVV VA E
Sbjct: 303 HIREGKITYVEDVADGLEKAPEALVGLFHGKNVGKQVVVVARE 345
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* Length = 333 | Back alignment and structure |
|---|
Score = 509 bits (1314), Expect = 0.0
Identities = 141/339 (41%), Positives = 195/339 (57%), Gaps = 17/339 (5%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI 63
MV+ K LK + G P ++D + + P + VLL+ L+LS DPYMR
Sbjct: 5 MVKAKSWTLKKHFQGKPTQSDFELKTVELP---PLKNGEVLLEALFLSVDPYMRIASK-- 59
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKI---Q 120
K G + G VA+V++S+N F G +V +GW + + L K+
Sbjct: 60 ------RLKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEW 113
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180
+PLS G +GMPG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL GC V
Sbjct: 114 PDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKV 173
Query: 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLL 240
VG+AGS +KI LK + GFD AFNYK L EALK+ P+G D YF+NVGG+ L+ VL
Sbjct: 174 VGAAGSDEKIAYLK-QIGFDAAFNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLS 232
Query: 241 NMKIHGRIAVCGMISQYNL-DRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMII 298
MK G+IA+CG IS YN D+ + ++ K++R+EGF+V + + K L ++
Sbjct: 233 QMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLM 292
Query: 299 PHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+ EGKI Y E + +G E+ PA I + +G N+GK VV
Sbjct: 293 KWVLEGKIQYHEHVTKGFENMPAAFIEMLNGANLGKAVV 331
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* Length = 357 | Back alignment and structure |
|---|
Score = 489 bits (1261), Expect = e-175
Identities = 114/351 (32%), Positives = 175/351 (49%), Gaps = 16/351 (4%)
Query: 5 VRNKQVILKD--YVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN 62
+ ++V+L +G P + M E L V ++ LYLS DPYMR RM
Sbjct: 7 MIVQRVVLNSRPGKNGNPVAENFRMEEV--YLPDNINEGQVQVRTLYLSVDPYMRCRMNE 64
Query: 63 IKG-SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT-GWEEYSLVTAPQLFKI- 119
G Y+ ++ + G G+ + +S++ KGD V W+ ++ L K+
Sbjct: 65 DTGTDYITPWQLSQVVDGGGIGIIEESKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKVD 124
Query: 120 -QHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQG--ECVFISAASGAVGQLVGQFAKLL 176
Q D LSY+ G +GMPG+T+ G E G + + +S A+GA G + GQ L
Sbjct: 125 PQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHITAGSNKTMVVSGAAGACGSVAGQIGHFL 184
Query: 177 GCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKML 235
GC VVG G+ +K LL ++ GFD A NYK++ ++ E L+ P G+D+YF+NVGG +
Sbjct: 185 GCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFDNVGGNIS 243
Query: 236 DAVLLNMKIHGRIAVCGMISQYNLDRPEGV----HNLMYLVTKRVRMEGFLVRDYYHLYP 291
D V+ M + I +CG ISQYN D P + + E FLV +Y +
Sbjct: 244 DTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFE 303
Query: 292 KFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+ + KEGK+ E + GLE+ A + +G N+GKQ+V ++ E
Sbjct: 304 PGILQLSQWFKEGKLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* Length = 362 | Back alignment and structure |
|---|
Score = 318 bits (818), Expect = e-108
Identities = 88/356 (24%), Positives = 146/356 (41%), Gaps = 30/356 (8%)
Query: 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPK-GSNGVLLKNLYLSCDPYMRPR 59
M +++++ F + + + VP G +L++N ++ +
Sbjct: 20 FQSM--MQKLVVTRLSPNFREAVTLS-----RDCPVPLPGDGDLLVRNRFVGVNASDINY 72
Query: 60 MTNI-KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT--GWEEYSLVTAPQL 116
S F G G V + S + + G V M + EY++V A
Sbjct: 73 SAGRYDPSVKPPFDIGFEGIG-EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIA 131
Query: 117 FKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLL 176
+ Y L + G TAY E+ +G+ V ++AA+G GQ Q +K
Sbjct: 132 TPV---PSVKPEYLT-LLVSGTTAYISLKELGGLSEGKKVLVTAAAGGTGQFAMQLSKKA 187
Query: 177 GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLD 236
C+V+G+ S +K LK G D NYK E + LK+ +PEG+D+ +E+VGG M D
Sbjct: 188 KCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFD 245
Query: 237 AVLLNMKIHGRIAVCGMISQYN----LDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292
+ + GR+ V G IS Y L + L+ K ++GF + Y Y
Sbjct: 246 LAVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQA 305
Query: 293 FLEMIIPHIKEGKIVYVEDMA--------EGLESAPATLIGLFSGRNVGKQVVAVA 340
+ ++ G +V D+ GLES + ++ G+N GK VV +
Sbjct: 306 AMSHLLEMCVSGDLVCEVDLGDLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELP 361
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} Length = 349 | Back alignment and structure |
|---|
Score = 119 bits (300), Expect = 3e-31
Identities = 51/290 (17%), Positives = 95/290 (32%), Gaps = 32/290 (11%)
Query: 63 IKGSYVE----SFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT------GWEEYSLVT 112
IKG Y + G G + D + G V T W EY++
Sbjct: 69 IKGQYGQPRVKGRPAGFEGVG-TIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAE 127
Query: 113 APQLFKIQHTDVP--LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLV 169
A + + G + + +TA A F ++ + + ++A + + +L+
Sbjct: 128 AAACIP-----LLDTVRDEDGAAMIVNPLTAIAMF-DIVKQEGEKAFVMTAGASQLCKLI 181
Query: 170 GQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFE 228
AK G + + ++I LLK G N K D L+ E I+ +
Sbjct: 182 IGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKAEQPRIFLD 239
Query: 229 NVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288
V G + A+ M R + G + + L+ + +EGF + ++
Sbjct: 240 AVTGPLASAIFNAMPKRARWIIYGRLDP----DATVIREPGQLIFQHKHIEGFWLSEWMR 295
Query: 289 LYP----KFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGK 334
+ + +G+ L A A + + GK
Sbjct: 296 QFKERRGPAILEAQKRFSDGRWSTDVTAVVPLAEAIA-WVPAELTKPNGK 344
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} Length = 353 | Back alignment and structure |
|---|
Score = 113 bits (284), Expect = 8e-29
Identities = 64/292 (21%), Positives = 112/292 (38%), Gaps = 30/292 (10%)
Query: 64 KGSYV----ESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQL 116
+GSY S G+ +SG V + + GD V G+ + EY L+ A Q+
Sbjct: 76 QGSYPPPKDASPILGLELSGEIVG--VGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQI 133
Query: 117 FKIQHTDVP--LSYYTGILGMP--GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQF 172
P +P T +A +++ +GE V I + +G Q
Sbjct: 134 LPF-----PKGYDAVKAA-ALPETFFTVWANLFQMAGLTEGESVLIHGGTSGIGTTAIQL 187
Query: 173 AKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232
A+ G V +AGS K + + + G NY+ E D +K +G+DI + +G
Sbjct: 188 ARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGA 245
Query: 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP- 291
+ + ++ G +++ + E V NL ++ KR+ + G +R
Sbjct: 246 AYFERNIASLAKDGCLSIIAFLGGA---VAEKV-NLSPIMVKRLTVTGSTMRPRTAEEKR 301
Query: 292 ----KFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
L + P ++ G + V E L G +VGK ++ V
Sbjct: 302 AIRDDLLSEVWPLLEAGTVAPVIHKVFAFEDVADAHRLLEEGSHVGKVMLTV 353
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A Length = 364 | Back alignment and structure |
|---|
Score = 110 bits (276), Expect = 1e-27
Identities = 63/375 (16%), Positives = 119/375 (31%), Gaps = 54/375 (14%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPK-GSNGVLLKNLYLSCDP-------- 54
M+ + V+ + G PK+ + S E+ N V++K L +P
Sbjct: 1 MITAQAVLYTQH--GEPKDV---LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQG 55
Query: 55 -Y-MRPRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLV----WGMTGWEEY 108
Y +P T G+ + G + + S + GD V W +
Sbjct: 56 VYPSKPAKTTGFGTTEPAAPCGNEGLFEVIK--VGSNVSSLEAGDWVIPSHVNFGTWRTH 113
Query: 109 SLVTAPQLFKIQHTDVPLSYYT--GI-------LGMPGMTAYAGFYEVCSPKQGECVFI- 158
+L K+ + + G+ + + +TAY G+ FI
Sbjct: 114 ALGNDDDFIKLPNPAQSKANGKPNGLTINQGATISVNPLTAYLMLTHYVKLTPGKDWFIQ 173
Query: 159 SAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKIDLLKNKFGFDEAFNYKEE--PDLN 212
+ + AVG+ Q KLL + + + + LK + G + + +
Sbjct: 174 NGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSREFG 232
Query: 213 EALKRYF---PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM 269
+K + + VGGK + + +G + G +S
Sbjct: 233 PTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMS-----FQPVTIPTS 287
Query: 270 YLVTKRVRMEGFLVRDYYHLYP----KFLEMIIPHIKEGKIVYVEDMA---EGLESAPAT 322
+ K GF V + L II +EGK+ + + +G +
Sbjct: 288 LYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHEL 347
Query: 323 LIGLFSGRNVGKQVV 337
+ GKQ++
Sbjct: 348 YQDGVANSKDGKQLI 362
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} Length = 343 | Back alignment and structure |
|---|
Score = 108 bits (272), Expect = 3e-27
Identities = 70/288 (24%), Positives = 111/288 (38%), Gaps = 29/288 (10%)
Query: 65 GSYVESFKPG-----MPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQL 116
G VE F PG P G + + + G + EY ++ L
Sbjct: 73 GPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANL 132
Query: 117 FKIQHTDVP--LSYYT-GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFA 173
P LS+ + + +TA+ + + G+ V + AA V Q A
Sbjct: 133 APK-----PKNLSFEEAAAIPLTFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIA 187
Query: 174 KLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP-EGIDIYFENVGG 232
KL G V+ +AGS+DK+ K G DE NY PD + ++R +G D ++ G
Sbjct: 188 KLFGARVIATAGSEDKLRRAK-ALGADETVNYTH-PDWPKEVRRLTGGKGADKVVDHTGA 245
Query: 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292
+ V+ GRIA+ G S EG ++ +++ + G +
Sbjct: 246 LYFEGVIKATANGGRIAIAGASSG-----YEGTLPFAHVFYRQLSILGSTMAS-----KS 295
Query: 293 FLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340
L I+ ++EGK+ V LE+A L R GK V+ V
Sbjct: 296 RLFPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQVG 343
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} Length = 349 | Back alignment and structure |
|---|
Score = 107 bits (270), Expect = 6e-27
Identities = 63/296 (21%), Positives = 104/296 (35%), Gaps = 34/296 (11%)
Query: 70 SFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQLFKIQHTDVP- 125
PG SG A L ++ GD V W E ++KI P
Sbjct: 61 PLVPGFECSGIVEA--LGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKI-----PD 113
Query: 126 -LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
+S+ M +TAY +EV + ++G V + +A G VGQ V Q + V
Sbjct: 114 DMSFSEAAAFPMNFVTAYVMLFEVANLREGMSVLVHSAGGGVGQAVAQLCSTVPNVTVFG 173
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
S K + +K+ F+ D + +KR EG+DI + + G L +K
Sbjct: 174 TASTFKHEAIKD--SVTHLFDRNA--DYVQEVKRISAEGVDIVLDCLCGDNTGKGLSLLK 229
Query: 244 IHGRIAVCGMISQYNLDRPEGVH-----------NLMYLVTKRVRMEGFLVRDYYHLYPK 292
G + G + + N + L + + GF + + +
Sbjct: 230 PLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGR 289
Query: 293 ------FLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
+E +I + KI V D LE + + N+GK ++ V
Sbjct: 290 AGLIRGVVEKLIGLYNQKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A Length = 357 | Back alignment and structure |
|---|
Score = 106 bits (268), Expect = 2e-26
Identities = 54/297 (18%), Positives = 107/297 (36%), Gaps = 33/297 (11%)
Query: 63 IKGSYVESFKPGMP-ISGYGVAKVLDSENPE---FKKGDLV----WGMTGWEEYSLVTAP 114
I+G+Y P +P + G + + K GD V G+ W ++ +
Sbjct: 74 IQGNYG--LLPELPAVGGNEGVAQVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEE 131
Query: 115 QLFKIQHTDVP--LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQ 171
L ++ P + + LG+ TAY + + G+ V +A++ VGQ V Q
Sbjct: 132 ALIQV-----PSDIPLQSAATLGVNPCTAYRMLMDFEQLQPGDSVIQNASNSGVGQAVIQ 186
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRY-FPEGIDIYF 227
A LG + + I L + G + EE E + +
Sbjct: 187 IAAALGLRTINVVRDRPDIQKLSDRLKSLGAEHVITE-EELRRPEMKNFFKDMPQPRLAL 245
Query: 228 ENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287
VGGK +L + G + G ++ + V ++ L+ K +++ GF + +
Sbjct: 246 NCVGGKSSTELLRQLARGGTMVTYGGMA-----KQPVVASVSLLIFKDLKLRGFWLSQWK 300
Query: 288 HLYP-----KFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
+ + + + I+ G++ L+ + L KQ++ +
Sbjct: 301 KDHSPDQFKELILTLCDLIRRGQLTAPACSQVPLQDYQSALEASMKPFISSKQILTM 357
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} Length = 342 | Back alignment and structure |
|---|
Score = 104 bits (263), Expect = 6e-26
Identities = 59/290 (20%), Positives = 96/290 (33%), Gaps = 32/290 (11%)
Query: 63 IKGSYVE----SFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQ 115
KG Y F PG+ +G V E K GD V G+ E V
Sbjct: 68 TKGEYQLKMEPPFVPGIETAGV-VRSA--PEGSGIKPGDRVMAFNFIGGYAERVAVAPSN 124
Query: 116 LFKIQHTDVP--LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQF 172
+ P L L T Y + + GE V + A+G +G Q
Sbjct: 125 ILPT-----PPQLDDAEAVALIANYHTMYFAYARRGQLRAGETVLVLGAAGGIGTAAIQI 179
Query: 173 AKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFENVG 231
AK +G V+ + +K G D +E +A++ G+D+ + +G
Sbjct: 180 AKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLEE--GWAKAVREATGGAGVDMVVDPIG 236
Query: 232 GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP 291
G D + + GR+ V G + P + L+ + + G ++ +
Sbjct: 237 GPAFDDAVRTLASEGRLLVVGFAAG---GIPT--IKVNRLLLRNASLIGVAWGEFLRTHA 291
Query: 292 KFL----EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
+L + + EG V L L G+ GK V+
Sbjct: 292 DYLYETQAGLEKLVAEGMRPPV-SARIPLSEGRQALQDFADGKVYGKMVL 340
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A Length = 456 | Back alignment and structure |
|---|
Score = 104 bits (262), Expect = 2e-25
Identities = 67/309 (21%), Positives = 103/309 (33%), Gaps = 47/309 (15%)
Query: 65 GSYVESFKPGMPISGYGVAKVLDSE----NPEFKKGDLVWGMT----GWEEYSLVTAPQL 116
G V +++ G + + ++ L+S + +WG G E +LV + QL
Sbjct: 133 GPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNFGGLAEIALVKSNQL 192
Query: 117 FKIQHTDVP--LSYYT-GILGMPGMTAYAGFYEVCS--PKQGECVFISAASGAVGQLVGQ 171
P LS+ G+ TAY KQG+ V I ASG +G Q
Sbjct: 193 MPK-----PDHLSWEEAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQ 247
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE----------------PDLNEAL 215
FA G + S K ++ + G + + E + +
Sbjct: 248 FALAGGANPICVVSSPQKAEICR-AMGAEAIIDRNAEGYRFWKDENTQDPKEWKRFGKRI 306
Query: 216 KRYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTK 274
+ E IDI FE+ G + A + + G I C S Y + YL
Sbjct: 307 RELTGGEDIDIVFEHPGRETFGASVFVTRKGGTITTCASTSGYMHEYD-----NRYLWMS 361
Query: 275 RVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGK 334
R+ G +Y E I +G+I LE + + GK
Sbjct: 362 LKRIIGSHFANYRE----AWEA-NRLIAKGRIHPTLSKVYSLEDTGQAAYDVHRNLHQGK 416
Query: 335 QVVAV-APE 342
V APE
Sbjct: 417 VGVLCLAPE 425
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A Length = 447 | Back alignment and structure |
|---|
Score = 104 bits (261), Expect = 3e-25
Identities = 64/309 (20%), Positives = 95/309 (30%), Gaps = 47/309 (15%)
Query: 65 GSYVESFKPG-----MPISGYGVAKVLDSENPEFKKGDLVWGMTGW---EEYSLVTAPQL 116
G V +KPG P + + T + EY +V A QL
Sbjct: 125 GIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGGLAEYGVVRASQL 184
Query: 117 FKIQHTDVP--LSYYT-GILGMPGMTAY-AGFYEVCSP-KQGECVFISAASGAVGQLVGQ 171
P L++ + + TAY + + KQG+ V I ASG +G Q
Sbjct: 185 LPK-----PAHLTWEEAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQ 239
Query: 172 FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP----------- 220
F K G V S K ++ G D N E ++
Sbjct: 240 FVKNGGGIPVAVVSSAQKEAAVR-ALGCDLVINRAELGITDDIADDPRRVVETGRKLAKL 298
Query: 221 ------EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTK 274
DI FE+ G ++ + G + CG S Y YL K
Sbjct: 299 VVEKAGREPDIVFEHTGRVTFGLSVIVARRGGTVVTCGSSSGYLHTFD-----NRYLWMK 353
Query: 275 RVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGK 334
++ G ++ + + G +V L A + + R VGK
Sbjct: 354 LKKIVGSHGANHEE-----QQATNRLFESGAVVPAMSAVYPLAEAAEACRVVQTSRQVGK 408
Query: 335 QVVAV-APE 342
V APE
Sbjct: 409 VAVLCMAPE 417
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* Length = 354 | Back alignment and structure |
|---|
Score = 103 bits (259), Expect = 3e-25
Identities = 67/296 (22%), Positives = 124/296 (41%), Gaps = 33/296 (11%)
Query: 64 KGSYV----ESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQL 116
+G Y S G+ SG VA++ +K GD + G +Y V L
Sbjct: 70 QGQYDPPPGASNILGLEASG-HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLL 128
Query: 117 FKIQHTDVP--LSYYTGILGMP--GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQF 172
I P L+ +P +TA+ + V + + G+ V I A VG Q
Sbjct: 129 MPI-----PEGLTLTQA-AAIPEAWLTAFQLLHLVGNVQAGDYVLIHAGLSGVGTAAIQL 182
Query: 173 AKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFENVG 231
++ G + +AGS+ K+ + + K G FNYK+E D +EA ++ G+++ + +G
Sbjct: 183 TRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIG 240
Query: 232 GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP 291
G + + + + GR + G++ +++ L+ KR + L+R + Y
Sbjct: 241 GSYWEKNVNCLALDGRWVLYGLMGGGDIN----GPLFSKLLFKRGSLITSLLRSRDNKYK 296
Query: 292 -----KFLEMIIPHI---KEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
F E I+PH +++ V D + + + +N+GK V+ +
Sbjct: 297 QMLVNAFTEQILPHFSTEGPQRLLPVLDRIYPVTEIQEAHKYMEANKNIGKIVLEL 352
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} Length = 363 | Back alignment and structure |
|---|
Score = 100 bits (252), Expect = 2e-24
Identities = 63/284 (22%), Positives = 93/284 (32%), Gaps = 32/284 (11%)
Query: 65 GSYVESFKPG-------MPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLF 117
G V F+PG P G+ G G EY ++
Sbjct: 99 GKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPG--VLSEYVVLPEGWFV 156
Query: 118 KIQHTDVP--LSYYT-GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAK 174
P L L G+TA+ E + G+ V + G V Q AK
Sbjct: 157 AA-----PKSLDAAEASTLPCAGLTAWFALVEKGHLRAGDRVVVQGTGG-VALFGLQIAK 210
Query: 175 LLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP-EGIDIYFENVGGK 233
G V+ ++ S++K+D G D N E D E + G D E GG
Sbjct: 211 ATGAEVIVTSSSREKLDRAF-ALGADHGINRL-EEDWVERVYALTGDRGADHILEIAGGA 268
Query: 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293
L L + GRI+V G++ E + L+ K ++G V
Sbjct: 269 GLGQSLKAVAPDGRISVIGVLEG-----FEVSGPVGPLLLKSPVVQGISVGHRRA----L 319
Query: 294 LEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVV 337
++ + + + V DM P L L G GK V+
Sbjct: 320 EDL-VGAVDRLGLKPVIDMRYKFTEVPEALAHLDRG-PFGKVVI 361
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} Length = 340 | Back alignment and structure |
|---|
Score = 100 bits (251), Expect = 3e-24
Identities = 48/331 (14%), Positives = 118/331 (35%), Gaps = 42/331 (12%)
Query: 33 ELQVPK-GSNGVLLKNLYLSC---DPYMRPRMTNIKGSYVESFKPGMP-ISGY---GVAK 84
+ N V ++ L D G+Y + + +P I GY G+ +
Sbjct: 24 YKNIEPLKDNEVFVRMLVRPINPSDLIPI------TGAY--AHRIPLPNIPGYEGVGIVE 75
Query: 85 VLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQLFKIQHTDVP--LSYYTG-ILGMPGM 138
+ + G V + W+EY +A + +P + +T + + +
Sbjct: 76 NVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVP-----IPDSIDDFTAAQMYINPL 130
Query: 139 TAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG 198
TA+ E + ++ + + ++A A+G L Q +++L ++ + + L + G
Sbjct: 131 TAWVTCTETLNLQRNDVLLVNACGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLG 189
Query: 199 FDEAFNYKEEPDLNEALKRY-FPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQY 257
+ L E + G D +++GG + + +++ +G G++S
Sbjct: 190 AAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELAFSLRPNGHFLTIGLLS-- 246
Query: 258 NLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYP-----KFLEMIIPHIKEGKIVYVE-D 311
+ + + +V F +R + + +I ++ ++ +++
Sbjct: 247 ---GIQVNWAEI-VTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVH 302
Query: 312 MAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
L A + + S +V + E
Sbjct: 303 STYELADVKAAVDVVQSAEKTKGKVFLTSYE 333
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 Length = 351 | Back alignment and structure |
|---|
Score = 99.6 bits (249), Expect = 6e-24
Identities = 70/307 (22%), Positives = 124/307 (40%), Gaps = 48/307 (15%)
Query: 53 DPYMRPRMTNIKGSYVE----SFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWE-- 106
+ Y+R G+Y + PG ++G A + FKKGD V+ +
Sbjct: 73 ETYIR------SGTYSRKPLLPYTPGSDVAGVIEA--VGDNASAFKKGDRVFTSSTISGG 124
Query: 107 --EYSLVTAPQLFKIQHTDVP--LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAA 161
EY+L ++K+ P L + G +G+P TAY K GE V + A
Sbjct: 125 YAEYALAADHTVYKL-----PEKLDFKQGAAIGIPYFTAYRALIHSACVKAGESVLVHGA 179
Query: 162 SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRY-FP 220
SG VG Q A+ G ++G+AG+++ ++ + G E FN++E + + +K+Y
Sbjct: 180 SGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGE 237
Query: 221 EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEG 280
+GIDI E + L L + GR+ V G + N + K + G
Sbjct: 238 KGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGTIEI-------NPRDTMAKESSIIG 290
Query: 281 FLVRDYYHLYPK-FLEMIIPHIKEGKI------VY-VEDMAEGLESAPATLIGLFSGRNV 332
+ + + + ++ G + Y +E +AE E+ +
Sbjct: 291 VTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPLEKVAEAHENI------IHGSGAT 344
Query: 333 GKQVVAV 339
GK ++ +
Sbjct: 345 GKMILLL 351
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} Length = 333 | Back alignment and structure |
|---|
Score = 98.1 bits (245), Expect = 2e-23
Identities = 55/237 (23%), Positives = 101/237 (42%), Gaps = 23/237 (9%)
Query: 33 ELQVPK-GSNGVLLKNLYLSC---DPYMRPRMTNIKGSYVESFKPGMPIS----GYGVAK 84
E++V G V L+N + D Y R G PI V +
Sbjct: 20 EVKVGSPGPGQVRLRNTAIGVNFLDTYHR------AGIPHPLVVGEPPIVVGFEAAAVVE 73
Query: 85 VLDSENPEFKKGDLV-WGMTGW---EEYSLVTAPQLFKI-QHTDVPLSYYTGILGMPGMT 139
+ +F G+ V + + L A +L K+ + D+ + G++ + GMT
Sbjct: 74 EVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKVPKDLDLDDVHLAGLM-LKGMT 132
Query: 140 AYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF 199
A ++ K G+ V I AA+G +G ++ +A+ LG V+G+ +++K + + K G
Sbjct: 133 AQYLLHQTHKVKPGDYVLIHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGC 191
Query: 200 DEAFNYKEEPDLNEALKRYFP-EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
NY + D E ++ +G+D+ ++++G L L ++ G A G S
Sbjct: 192 HHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQKSLDCLRPRGMCAAYGHAS 247
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* Length = 325 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 3e-23
Identities = 55/233 (23%), Positives = 90/233 (38%), Gaps = 20/233 (8%)
Query: 33 ELQVPK-GSNGVLLKNLYLSC---DPYMRPRMTNIKGSYVESFKPGMP-ISGYGVAKVLD 87
+ + G V+++N + D Y R G Y F P G GV + +
Sbjct: 20 DFEPEAPGPQAVVVRNKAIGLNFIDTYYR------SGLYPAPFLPSGLGAEGAGVVEAVG 73
Query: 88 SENPEFKKGDLV-WGMTGW---EEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAG 143
E FK GD V +G E ++ L K+ V ++ + G+T
Sbjct: 74 DEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKLAD-SVSFEQAAALM-LKGLTVQYL 131
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF 203
+ K GE + AA+G VG L Q+AK LG ++G+ S +K K G E
Sbjct: 132 LRQTYQVKPGEIILFHAAAGGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETI 190
Query: 204 NYKEEPDLNEALKRYFP-EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
+Y E D+ + + + + ++ VG L ++ G + G S
Sbjct: 191 DYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDSVAPRGLVVSFGNAS 242
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 Length = 327 | Back alignment and structure |
|---|
Score = 97.3 bits (243), Expect = 3e-23
Identities = 51/233 (21%), Positives = 86/233 (36%), Gaps = 20/233 (8%)
Query: 33 ELQVPK-GSNGVLLKNLYLSC---DPYMRPRMTNIKGSYVESFKPGMP-ISGYGVAKVLD 87
E N + ++N + D Y+R G Y P G+ +
Sbjct: 20 EFTPADPAENEIQVENKAIGINFIDTYIR------SGLYPPPSLPSGLGTEAAGIVSKVG 73
Query: 88 SENPEFKKGDLV-WGMTGW---EEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAG 143
S K GD V + + + A + + + + G+T Y
Sbjct: 74 SGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAILPA-AISFEQAAASF-LKGLTVYYL 131
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF 203
+ K E AA+G VG + Q+AK LG ++G+ G+ K K G +
Sbjct: 132 LRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVI 190
Query: 204 NYKEEPDLNEALKRYFP-EGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255
NY+EE DL E LK + + + +++VG + L ++ G + G S
Sbjct: 191 NYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSS 242
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} Length = 343 | Back alignment and structure |
|---|
Score = 95.8 bits (239), Expect = 1e-22
Identities = 50/275 (18%), Positives = 93/275 (33%), Gaps = 44/275 (16%)
Query: 92 EFKKGDLVWGMTGWE--------EYSLVTAPQLFK----IQHTD---VPLSYYTGILGMP 136
F+ GD V+G+TG +++ V A L + +PL
Sbjct: 84 SFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASKPAALTMRQASVLPLV--------- 134
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
+TA+ G + + G+ V I G VG + Q A G V +A ++ ++
Sbjct: 135 FITAWEGLVDRAQVQDGQTVLIQGGGGGVGHVAIQIALARGARVFATA-RGSDLEYVR-D 192
Query: 197 FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQ 256
G +E D A + +G D+ ++ +GG +LDA +K G + C
Sbjct: 193 LGATPIDASREPED--YAAEHTAGQGFDLVYDTLGGPVLDASFSAVKRFGHVVSCLGWGT 250
Query: 257 YNLDRPEGVHNLMYLV-TKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI-VYV----- 309
+ L V T + + + + L ++ GK+ +
Sbjct: 251 HKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEM----LREADALVQTGKLAPRLDPRTF 306
Query: 310 --EDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342
++ ++ R GK + V
Sbjct: 307 SIAEIGSAYDAVLGRND---VPRQRGKIAITVEGH 338
|
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* Length = 334 | Back alignment and structure |
|---|
Score = 95.0 bits (237), Expect = 2e-22
Identities = 59/289 (20%), Positives = 111/289 (38%), Gaps = 31/289 (10%)
Query: 33 ELQVPK-GSNGVLLKNLYLSC---DPYMRPRMTNIKGSYVES--FKPGMPISGYGVAKVL 86
+ VP +L+KN Y + Y R KG Y + G SG V
Sbjct: 27 DYPVPSISEEELLIKNKYTGVNYIESYFR------KGIYPCEKPYVLGREASGT-VVAK- 78
Query: 87 DSENPEFKKGDLV-WGMTGW--EEYSLVTAPQLFKI--QHTDVPLSYYTGILGMPGMTAY 141
F+ GD V + + + + + K+ +D L Y L + +TA
Sbjct: 79 GKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKLPKGTSDEELKLYAAGL-LQVLTAL 137
Query: 142 AGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE 201
+ E K+G+ V + AA+G VG ++ Q K+ G + + A + +K+ + K ++G +
Sbjct: 138 SFTNEAYHVKKGDYVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEY 196
Query: 202 AFNYKEEPDLNEALKRYF-PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLD 260
N +E D+ + ++ +G+D F++VG + L +K G G S
Sbjct: 197 LINASKE-DILRQVLKFTNGKGVDASFDSVGKDTFEISLAALKRKGVFVSFGNASG---- 251
Query: 261 RPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEM---IIPHIKEGKI 306
++ L K + + + Y ++ + K+
Sbjct: 252 LIPPF-SITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKL 299
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* Length = 371 | Back alignment and structure |
|---|
Score = 93.2 bits (232), Expect = 1e-21
Identities = 44/310 (14%), Positives = 92/310 (29%), Gaps = 53/310 (17%)
Query: 71 FKPGMPISGYGVAKV---LDSENPEFKKGDLVWGMT-----------GWEEYSLVTAPQL 116
P G A + S+ + GD V+G + +Y++
Sbjct: 60 ATPW-AFLGTDYAGTVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVW 118
Query: 117 FKIQHTDVP--LSYYTG-ILGMPGMTAYAGFYEV------------CSPKQGECVFISAA 161
KI P LS+ L TA + + + V +
Sbjct: 119 AKI-----PKGLSFEQAAALPAGISTAGLAMKLLGLPLPSPSADQPPTHSKPVYVLVYGG 173
Query: 162 SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE 221
S A + Q +L G + + S DL K G +E F+Y+ P+L + ++ Y
Sbjct: 174 STATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYR-APNLAQTIRTYTKN 230
Query: 222 GIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVT---K 274
+ + + A + + G ++ R + T +
Sbjct: 231 NLRYALDCITNVESTTFCFAAIG--RAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGE 288
Query: 275 RVRMEGFLVR----DYYHLYPKFLEMIIPHIKEGKI--VYVEDMAEGLESAPATLIGLFS 328
R + + +++G++ + + G + + +
Sbjct: 289 GSTWPAPYGRPGSEEERQFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRK 348
Query: 329 GRNVGKQVVA 338
G G+++V
Sbjct: 349 GELSGEKLVV 358
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} Length = 375 | Back alignment and structure |
|---|
Score = 92.9 bits (231), Expect = 2e-21
Identities = 59/274 (21%), Positives = 97/274 (35%), Gaps = 40/274 (14%)
Query: 92 EFKKGDLVWGMTGWE------EYSLVTAPQLFK----IQHTD---VPLSYYTGILGMPGM 138
FK GD VW E+ +V+ ++ + HT +P +
Sbjct: 115 YFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHKPKSLTHTQAASLPYV---------AL 165
Query: 139 TAYAGFYEV----CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194
TA++ +V G+ V I ASG VG Q K +V S+D +L++
Sbjct: 166 TAWSAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR 224
Query: 195 NKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKI--HGRIAVCG 252
K G D+ +YK + E LK + D +NVGG +K
Sbjct: 225 -KLGADDVIDYKSG-SVEEQLKS--LKPFDFILDNVGGSTETWAPDFLKKWSGATYVTLV 280
Query: 253 MISQYNLDR----PEGVHNLMYLVTKRVRMEGFLVRDYYHLY---PKFLEMIIPHIKEGK 305
N+DR + + + +K ++ V + + L+ I + GK
Sbjct: 281 TPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFMASGPCLDDIAELVDAGK 340
Query: 306 IVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
I V + P + + G GK V+ V
Sbjct: 341 IRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} Length = 321 | Back alignment and structure |
|---|
Score = 91.9 bits (229), Expect = 2e-21
Identities = 60/262 (22%), Positives = 90/262 (34%), Gaps = 43/262 (16%)
Query: 92 EFKKGDLVWGMTGWE-------EYSLVTAPQLFK----IQHTD---VPLSYYTGILGMPG 137
GD V G+ G+ EY + + + + +P + G
Sbjct: 88 NVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQKLEKLSFLQAASLPTA---------G 138
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TA KQG+ V I A +G VG L Q AK G V+ +A SK LK
Sbjct: 139 LTALQAL-NQAEVKQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-AL 195
Query: 198 GFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQY 257
G ++ NY EE D A+ +D + VGG + + +K G I I+
Sbjct: 196 GAEQCINYHEE-DFLLAI----STPVDAVIDLVGGDVGIQSIDCLKETGCIVSVPTITAG 250
Query: 258 NLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE 317
+ + R G L + + L + + E K+ L
Sbjct: 251 RVIEVAKQKH--------RRAFGLLKQF----NIEELHYLGKLVSEDKLRIEISRIFQLS 298
Query: 318 SAPATLIGLFSGRNVGKQVVAV 339
A L +G GK V V
Sbjct: 299 EAVTAHELLETGHVRGKLVFKV 320
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} Length = 346 | Back alignment and structure |
|---|
Score = 83.8 bits (208), Expect = 2e-18
Identities = 63/281 (22%), Positives = 96/281 (34%), Gaps = 54/281 (19%)
Query: 93 FKKGDLVWGMTGWE------EYSLVTA------PQLFKIQHTD---VPLSYYTGILGMPG 137
F +GD+V+ + EY L+ P+ I +PL TGI
Sbjct: 81 FNQGDIVYYSGSPDQNGSNAEYQLINERLVAKAPK--NISAEQAVSLPL---TGI----- 130
Query: 138 MTAY------AGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
TAY G + +G+ + I +G VG + Q AK G V+ +A + I+
Sbjct: 131 -TAYETLFDVFGISRNRNENEGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIE 189
Query: 192 LLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM-LDAVLLNMKIHGRIAV 250
K K G D N+KE L K E +D F M D ++ +K G IA
Sbjct: 190 WTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFNTDMYYDDMIQLVKPRGHIAT 246
Query: 251 CGMISQYNLDRPEGVHNLMYLVTKRVRM--EGFLVRDYYHLYP-----KFLEMIIPHIKE 303
E +L L K + E R ++LE I +++
Sbjct: 247 I--------VAFENDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQ 298
Query: 304 GKIVYVEDMAEG---LESAPATLIGLFSGRNVGKQVVAVAP 341
E+ L S +GK V+ +
Sbjct: 299 NIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D Length = 302 | Back alignment and structure |
|---|
Score = 83.0 bits (206), Expect = 3e-18
Identities = 64/290 (22%), Positives = 106/290 (36%), Gaps = 45/290 (15%)
Query: 63 IKGSYVE----SFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMT---GWEEYSLVTAPQ 115
G+Y+ F PGM + G G + G E V
Sbjct: 45 RLGAYLTRLHPPFIPGMEVVGVVE-------------GRRYAALVPQGGLAERVAVPKGA 91
Query: 116 LFKIQHTDVP--LSYYTG-ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQF 172
L + P LS + +TAY + + GE V + AA+GA+G Q
Sbjct: 92 LLPL-----PEGLSPEEAAAFPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQV 145
Query: 173 AKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232
A+ +G V+ +A +K+ L G +EA Y E P+ +A G+D+ E V G
Sbjct: 146 ARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVPERAKAWG-----GLDLVLE-VRG 198
Query: 233 KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH---L 289
K ++ L + GR+ G + + L+ + + + GF + L
Sbjct: 199 KEVEESLGLLAHGGRLVYIGAAEG---EVAPI--PPLRLMRRNLAVLGFWLTPLLREGAL 253
Query: 290 YPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
+ L ++P + ++ V A A L + GK VV +
Sbjct: 254 VEEALGFLLPRL-GRELRPVVGPVFPFAEAEAAFRALLDRGHTGKVVVRL 302
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} Length = 379 | Back alignment and structure |
|---|
Score = 80.4 bits (198), Expect = 5e-17
Identities = 41/224 (18%), Positives = 70/224 (31%), Gaps = 27/224 (12%)
Query: 79 GYGVAKVLDSENPEFKKGDLVWGMTG---WEEYSLVTAPQLFKIQHTDVP--LSYYTGI- 132
G GV S G + +Y + A Q +P + G
Sbjct: 98 GAGVVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLV-----LPEGATPADGAS 152
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
+ +TA G E + + +AA+ +GQ++ Q G +V +++ DL
Sbjct: 153 SFVNPLTAL-GMVETMRLEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADL 211
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
LK G N + + + G I F+ GG L +L
Sbjct: 212 LK-AQGAVHVCNAASPTFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAR 270
Query: 253 MISQY------------NLDRPEGVHNLMYLVTKRVRMEGFLVR 284
S+Y LD N + + + G+L+
Sbjct: 271 EYSRYGSTTHKQVYLYGGLDTSPTEFNRNFGMAWGMG--GWLLF 312
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 Length = 328 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 3e-15
Identities = 67/298 (22%), Positives = 110/298 (36%), Gaps = 63/298 (21%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLV----W--GMT---GWEEYSLVTAPQLFKIQHTD 123
PG+ ++G V+ S++P F++GD V + G+T G+ EY+ + L
Sbjct: 64 PGIDLAG----VVVSSQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWL------- 112
Query: 124 VPL-----SYYTGILGMPGMTAYAG---FYEVCSPKQGECVFISAASGAVGQLVGQFAKL 175
VPL +G G TA E + V ++ A+G VG L
Sbjct: 113 VPLPKGLTLKEAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAK 172
Query: 176 LGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-EPDLNEAL-KRYFPEGIDIYFENVGGK 233
G V S G + D L+ G E ++ + L K+ + +D VGG+
Sbjct: 173 RGYTVEASTGKAAEHDYLR-VLGAKEVLAREDVMAERIRPLDKQRWAAAVD----PVGGR 227
Query: 234 MLDAVLLNMKIHGRIAVCGMISQYNLD-----------RPEGVHNLMYLVTKRVRMEGFL 282
L VL M+ G +AV G+ + G+ ++ + R+R+ L
Sbjct: 228 TLATVLSRMRYGGAVAVSGLTGGAEVPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERL 287
Query: 283 VRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340
D L P + + + L P L + G G+ VV +A
Sbjct: 288 AGD---LKPDLERIA-------QEI-------SLAELPQALKRILRGELRGRTVVRLA 328
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} Length = 363 | Back alignment and structure |
|---|
Score = 74.7 bits (184), Expect = 3e-15
Identities = 30/180 (16%), Positives = 57/180 (31%), Gaps = 36/180 (20%)
Query: 92 EFKKGDLVWGMTGWE------EYSLVTA------PQLFKIQHTD---VPLSYYTGILGMP 136
F+ GD V+ E+ LV P+ + + +PL T I
Sbjct: 102 LFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRKPK--TLDWAEAAALPL---TSI---- 152
Query: 137 GMTAYAGFYEV-----CSPKQGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKI 190
TA+ F++ P + I +G VG + Q A+ V+ +A +
Sbjct: 153 --TAWEAFFDRLDVNKPVPGAAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQ 210
Query: 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGID-IYFENVGGKMLDAVLLNMKIHGRIA 249
+ +K G ++ + L + ++ K + + GR
Sbjct: 211 EWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTTHTDKHAAEIADLIAPQGRFC 267
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* Length = 324 | Back alignment and structure |
|---|
Score = 74.3 bits (183), Expect = 4e-15
Identities = 73/296 (24%), Positives = 103/296 (34%), Gaps = 62/296 (20%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLV----W--GMT---GWEEYSLVTAPQLFKIQHTD 123
PG+ +G V SE+P F G V W G G E + V L
Sbjct: 61 PGIDFAG----TVHASEDPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWL------- 109
Query: 124 VPL-----SYYTGILGMPGMTA----YAGFYEVCSPKQGECVFISAASGAVGQLVGQFAK 174
V L S I+G G TA A P+ GE V ++ ASG VG
Sbjct: 110 VALPAGLSSRNAMIIGTAGFTAMLCVMALEDAGIRPQDGE-VVVTGASGGVGSTAVALLH 168
Query: 175 LLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234
LG V +G + LK G + + E + K+ + ID VG K+
Sbjct: 169 KLGYQVAAVSGRESTHGYLK-SLGANRILSRDEFAESRPLEKQLWAGAID----TVGDKV 223
Query: 235 LDAVLLNMKIHGRIAVCGMISQYNLD-----------RPEGVHNLMYLVTKRVRMEGFLV 283
L VL M G +A CG+ + L R +GV ++M +R LV
Sbjct: 224 LAKVLAQMNYGGCVAACGLAGGFALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLV 283
Query: 284 RDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
+D L F I L AP + + + G+ +V +
Sbjct: 284 KD---LPESFYAQAATEI-------------TLADAPKFADAIINNQVQGRTLVKI 323
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} Length = 315 | Back alignment and structure |
|---|
Score = 73.4 bits (181), Expect = 6e-15
Identities = 39/259 (15%), Positives = 75/259 (28%), Gaps = 37/259 (14%)
Query: 92 EFKKGDLVWGMTGWE------EYSLVTAPQLFK----IQHTD---VPLSYYTGILGMPGM 138
G V T + E++++ ++ + +P P +
Sbjct: 79 SKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTLPDNLSFERAAALPC---------PLL 129
Query: 139 TAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG 198
TA+ F E + V I GAV L+ Q G V + L K G
Sbjct: 130 TAWQAF-EKIPLTKQREVLIVGF-GAVNNLLTQMLNNAGYVVDL-VSASLSQALAA-KRG 185
Query: 199 FDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYN 258
+ + + F+ V + A++ ++K +G I
Sbjct: 186 VRHLYREPSQ----------VTQKYFAIFDAVNSQNAAALVPSLKANGHIICIQDRIPAP 235
Query: 259 LDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLES 318
+D P + Y + F R + + + E ++ I +GK+ E
Sbjct: 236 ID-PAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIFRFEQ 294
Query: 319 APATLIGLFSGRNVGKQVV 337
L + +
Sbjct: 295 MIEALDHSEQTKLKTVLTL 313
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* Length = 330 | Back alignment and structure |
|---|
Score = 72.0 bits (177), Expect = 2e-14
Identities = 64/300 (21%), Positives = 108/300 (36%), Gaps = 67/300 (22%)
Query: 73 PGMPISGYGVAKVLDSENPEFKKGDLV----W--GMT---GWEEYSLVTAPQLFKIQHTD 123
G+ +G V+ S +P F +GD V + G++ G EY+ V L
Sbjct: 65 LGIDAAG----TVVSSNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWL------- 113
Query: 124 VPL-----SYYTGILGMPGMTAYAGFYEVCS---PKQGECVFISAASGAVGQLVGQFAKL 175
VPL + G G TA + + + V ++ A+G VG +
Sbjct: 114 VPLPQNLSLKEAMVYGTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNK 173
Query: 176 LGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA-----LKRYFPEGIDIYFENV 230
G VV S G+++ D LK + G A D+ + K+ + +D V
Sbjct: 174 RGYDVVASTGNREAADYLK-QLG---ASEVISREDVYDGTLKALSKQQWQGAVD----PV 225
Query: 231 GGKMLDAVLLNMKIHGRIAVCGMISQYNLD-----------RPEGVHNLMYLVTKRVRME 279
GGK L ++L ++ G +AV G+ + G+ ++ + R +
Sbjct: 226 GGKQLASLLSKIQYGGSVAVSGLTGGGEVPATVYPFILRGVSLLGIDSVYCPMDVRAAVW 285
Query: 280 GFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339
+ D L P L I+ LE P L + R G+ +V +
Sbjct: 286 ERMSSD---LKPDQLLTIVDREV------------SLEETPGALKDILQNRIQGRVIVKL 330
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* Length = 347 | Back alignment and structure |
|---|
Score = 62.3 bits (152), Expect = 4e-11
Identities = 43/249 (17%), Positives = 89/249 (35%), Gaps = 29/249 (11%)
Query: 96 GDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGEC 155
G G + EY +V + + L G+T Y S +
Sbjct: 119 GINFDG--AYAEYVIVPHYKYMYKLR-RLNAVE-AAPLTCSGITTYRAV-RKASLDPTKT 173
Query: 156 VFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA 214
+ + A G +G + Q AK + ++G ++ ++ K + G D N + D
Sbjct: 174 LLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASMQ-DPLAE 231
Query: 215 LKRYFP-EGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVH-NLMYL 271
++R +G+D + K L + G+ + G+ +H + +
Sbjct: 232 IRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLF-------GADLHYHAPLI 284
Query: 272 VTKRVRMEGFLV---RDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFS 328
++ G LV D+ + + + + GK+ + LE A + L +
Sbjct: 285 TLSEIQFVGSLVGNQSDFLGI----MRL----AEAGKVKPMITKTMKLEEANEAIDNLEN 336
Query: 329 GRNVGKQVV 337
+ +G+QV+
Sbjct: 337 FKAIGRQVL 345
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} Length = 404 | Back alignment and structure |
|---|
Score = 58.9 bits (143), Expect = 6e-10
Identities = 44/247 (17%), Positives = 88/247 (35%), Gaps = 23/247 (9%)
Query: 107 EYSLVTAPQLFKI----QHTDVPLSYYTGILGMPGMTAY-AGFYEVCSPKQGECVFISAA 161
EY V A + + + + G L P AY A + G+ V I
Sbjct: 163 EYVKVDAKYAWSLRELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG 222
Query: 162 SGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF- 219
G +G K G V+ S S+ + +L K + G D + +E + EA+ Y
Sbjct: 223 -GPIGLAAVAILKHAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTN 279
Query: 220 PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRME 279
G ++ E G L + I + ++ + +R ++
Sbjct: 280 GLGAKLFLEATGVPQLVWPQIEEVIWRARGINATVAIVARADAKIPLTGEVFQVRRAQIV 339
Query: 280 GFLVRDYYHLYPKFLEMIIPHIKEGKIVY----VEDMAEGLESAPATLIGLFSGRNVGKQ 335
G + +P+ + ++ + KI+ +E++ E ++ L + +++ K
Sbjct: 340 GSQGHSGHGTFPRVISLMASGMDMTKIISKTVSMEEIPEYIKR-------LQTDKSLVK- 391
Query: 336 VVAVAPE 342
V + E
Sbjct: 392 -VTMLNE 397
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 Length = 198 | Back alignment and structure |
|---|
Score = 55.7 bits (135), Expect = 2e-09
Identities = 21/67 (31%), Positives = 34/67 (50%), Gaps = 1/67 (1%)
Query: 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197
+TA+ EV GE V I +A+G VG AK++G + +AGS K ++L +
Sbjct: 24 LTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RL 82
Query: 198 GFDEAFN 204
G + +
Sbjct: 83 GVEYVGD 89
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* Length = 2512 | Back alignment and structure |
|---|
Score = 56.4 bits (136), Expect = 7e-09
Identities = 39/156 (25%), Positives = 60/156 (38%), Gaps = 24/156 (15%)
Query: 97 DLVWGM-TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGEC 155
W + + W +L A VP+ Y TAY + GE
Sbjct: 1631 HATWEVPSTW---TLEEAAS--------VPIVY---------TTAYYSLVVRGRMQPGES 1670
Query: 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-GFDEA-FNYKEEPDLNE 213
V I + SG VGQ A GC V + GS +K L+ +F DE F + +
Sbjct: 1671 VLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAEKRAYLQARFPQLDETCFANSRDTSFEQ 1730
Query: 214 A-LKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRI 248
L+ +G+D+ ++ + L A + + HGR
Sbjct: 1731 HVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRF 1766
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* Length = 348 | Back alignment and structure |
|---|
Score = 55.3 bits (134), Expect = 8e-09
Identities = 38/161 (23%), Positives = 67/161 (41%), Gaps = 15/161 (9%)
Query: 149 SPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKE 207
P G+ V I+ A G +G L AK G V+ S S + +L K K G D N E
Sbjct: 164 GPISGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFE 221
Query: 208 EPDLNEALKRYF-PEGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGV 265
E D+ + + G+D++ E G K L+ L + GR+++ G+ +
Sbjct: 222 E-DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPG-----KVTI 275
Query: 266 HNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI 306
++ K + + G R + + + ++ GK+
Sbjct: 276 DFNNLIIFKALTIYGITGRHLWETWYTVSRL----LQSGKL 312
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} Length = 795 | Back alignment and structure |
|---|
Score = 54.7 bits (132), Expect = 2e-08
Identities = 23/109 (21%), Positives = 41/109 (37%), Gaps = 18/109 (16%)
Query: 93 FKKGDLVWGMT--GWEEYSLVTAPQLFKIQHTD-------VPLSYYTGILGMPGMTAYAG 143
GD V GM + ++ + +I VP+ + +TAY
Sbjct: 286 LAPGDRVMGMIPKAFGPLAVADHRMVTRIPAGWSFARAASVPIVF---------LTAYYA 336
Query: 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
++ + GE + + +A+G VG Q A+ LG V +A +
Sbjct: 337 LVDLAGLRPGESLLVHSAAGGVGMAAIQLARHLGAEVYATASEDKWQAV 385
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* Length = 343 | Back alignment and structure |
|---|
Score = 53.3 bits (129), Expect = 4e-08
Identities = 30/180 (16%), Positives = 63/180 (35%), Gaps = 24/180 (13%)
Query: 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209
G+ V I+ A G +G + + G ++ S + ++ + + D N EE
Sbjct: 163 VSGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PYA-DRLVNPLEE- 218
Query: 210 DLNEALKRYFPEGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNL 268
DL E ++R G+++ E G + L+ + G + G+ S P
Sbjct: 219 DLLEVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD-----PIRFDLA 273
Query: 269 MYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI---------VYVEDMAEGLESA 319
LV + + G R + + + + + G++ + + E
Sbjct: 274 GELVMRGITAFGIAGRRLWQTWMQGTAL----VYSGRVDLSPLLTHRLPLSRYREAFGLL 329
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* Length = 370 | Back alignment and structure |
|---|
Score = 51.8 bits (125), Expect = 1e-07
Identities = 34/185 (18%), Positives = 68/185 (36%), Gaps = 29/185 (15%)
Query: 150 PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208
K G V I G +G L Q A+L G V+ S K L + + G +
Sbjct: 180 IKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG 237
Query: 209 PDLNEALKRYF---PEGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEG 264
D+ EA+ P G+D+ E G + + K G + + G++ Q E
Sbjct: 238 -DVVEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQ-----GEK 291
Query: 265 VH-NLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI---------VYVEDMAE 314
V ++ + +R+ G ++ + ++ + G I + +++ +
Sbjct: 292 VEIEPFDILFRELRVLG--SFINPFVHRRAADL----VATGAIEIDRMISRRISLDEAPD 345
Query: 315 GLESA 319
+ +
Sbjct: 346 VISNP 350
|
| >1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221 | Back alignment and structure |
|---|
Score = 50.6 bits (120), Expect = 4e-07
Identities = 55/362 (15%), Positives = 104/362 (28%), Gaps = 114/362 (31%)
Query: 1 MPEMVRNKQVILKDYVSGFPKETDMYMTE-------SSIE----LQVP------------ 37
E + IL + F D + S E +
Sbjct: 11 TGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLRLFWT 70
Query: 38 ---KGSNGV------LLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK-VLD 87
K V +L+ Y ++ M+ IK E +P M Y + L
Sbjct: 71 LLSKQEEMVQKFVEEVLRINY----KFL---MSPIK---TEQRQPSMMTRMYIEQRDRLY 120
Query: 88 SENPEFKKGDLVWGMTGWEEY-SLVTAPQLFKIQHTDVPLSYYTGILGMPGM--TAYAGF 144
++N F K + V + + Y L A L +++ I G+ G T A
Sbjct: 121 NDNQVFAKYN-VSRL---QPYLKLRQA--LLELRPAK-----NVLIDGVLGSGKTWVAL- 168
Query: 145 YEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYV-VGSAGSKDKIDLLKNKFGFDEAF 203
+VC + +C + F ++ + + S + + + K +
Sbjct: 169 -DVCLSYKVQCKM----DFKI------F------WLNLKNCNSPETVLEMLQKLLYQIDP 211
Query: 204 NYKEEPD-----------LNEALKRYF-----PEGIDIYFENV-GGKMLDAVLLNMKIHG 246
N+ D + L+R + + NV K +A +
Sbjct: 212 NWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLV-LLNVQNAKAWNA----FNLSC 266
Query: 247 RIAVCGMISQYNLDRPEGVHN-LMYLVTKRVRME----GFLVRDYYHLYPKFLEMII--- 298
+I + R + V + L T + ++ + L K+L+
Sbjct: 267 KILL--------TTRFKQVTDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDL 318
Query: 299 PH 300
P
Sbjct: 319 PR 320
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} Length = 346 | Back alignment and structure |
|---|
Score = 47.6 bits (114), Expect = 3e-06
Identities = 32/160 (20%), Positives = 56/160 (35%), Gaps = 9/160 (5%)
Query: 150 PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208
+ + V I A G +G L Q A LG V S +K+ L K FG + FN E
Sbjct: 158 GCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM 215
Query: 209 PDLNEALKRYF-PEGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVH 266
+ + E G + ++ + H ++A+ G + Q D
Sbjct: 216 -SAPQMQSVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQ---DLHLTSA 271
Query: 267 NLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI 306
++ K + + G + + E + E K+
Sbjct: 272 TFGKILRKELTVIGSWMNYSSPWPGQEWETASRLLTERKL 311
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} Length = 347 | Back alignment and structure |
|---|
Score = 43.3 bits (103), Expect = 5e-05
Identities = 35/151 (23%), Positives = 64/151 (42%), Gaps = 14/151 (9%)
Query: 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK 196
G+T Y + + G V IS A+G +G L Q+AK +G V+G G + K +L +
Sbjct: 155 GITVYKAL-KSANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-S 212
Query: 197 FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM-LDAVLLNMKIHGRIAVCGMIS 255
G + ++ +E D+ A+ + G + ++A ++ +G + GM
Sbjct: 213 IGGEVFIDFTKEKDIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGM-- 270
Query: 256 QYNLDRPEGVH---NLMYLVTKRVRMEGFLV 283
P G ++ V K + + G V
Sbjct: 271 ------PAGAKCCSDVFNQVVKSISIVGSYV 295
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* Length = 345 | Back alignment and structure |
|---|
Score = 39.9 bits (94), Expect = 8e-04
Identities = 39/242 (16%), Positives = 80/242 (33%), Gaps = 30/242 (12%)
Query: 104 GWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP-KQGECVFISAAS 162
EY +V + + D+ + G+T Y V G +
Sbjct: 124 SMAEYMIVDSARHLVPIG-DLDPVAAAPLTD-AGLTPYHAISRVLPLLGPGSTAVVIGV- 180
Query: 163 GAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-P 220
G +G + Q + + V+ D++ L + + G D A +A++
Sbjct: 181 GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSGA--GAADAIRELTGG 237
Query: 221 EGIDIYFENVG-GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRME 279
+G F+ VG +D + + G I+V G+ + +++ +
Sbjct: 238 QGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHA------GAHAKVGFFMIPFGASVV 291
Query: 280 GFLV---RDYYHLYPKFLEMIIPHIKEGKI-VYVEDMAEGLESAPATLIGLFSGRNVGKQ 335
+ L ++ + G++ ++ E L+ PA L G G+
Sbjct: 292 TPYWGTRSE--------LMEVVALARAGRLDIHTE--TFTLDEGPAAYRRLREGSIRGRG 341
Query: 336 VV 337
VV
Sbjct: 342 VV 343
|
Structure Templates Detected by HHsearch
Original result of HHsearch against PDB70 database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 342 | |||
| 3qwb_A | 334 | Probable quinone oxidoreductase; rossmann fold, qu | 100.0 | |
| 4dup_A | 353 | Quinone oxidoreductase; PSI-biology, structural ge | 100.0 | |
| 4eye_A | 342 | Probable oxidoreductase; structural genomics, niai | 100.0 | |
| 3uog_A | 363 | Alcohol dehydrogenase; structural genomics, protei | 100.0 | |
| 3jyn_A | 325 | Quinone oxidoreductase; rossmann fold, protein-NAD | 100.0 | |
| 3gms_A | 340 | Putative NADPH:quinone reductase; structural genom | 100.0 | |
| 4b7c_A | 336 | Probable oxidoreductase; NADP cofactor, rossmann f | 100.0 | |
| 3fbg_A | 346 | Putative arginate lyase; structural genomics, unkn | 100.0 | |
| 3gqv_A | 371 | Enoyl reductase; medium-chain reductase (MDR super | 100.0 | |
| 4dvj_A | 363 | Putative zinc-dependent alcohol dehydrogenase Pro; | 100.0 | |
| 3uko_A | 378 | Alcohol dehydrogenase class-3; alcohol dehydrogena | 100.0 | |
| 2j8z_A | 354 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 3s2e_A | 340 | Zinc-containing alcohol dehydrogenase superfamily; | 100.0 | |
| 4a27_A | 349 | Synaptic vesicle membrane protein VAT-1 homolog-L; | 100.0 | |
| 3gaz_A | 343 | Alcohol dehydrogenase superfamily protein; oxidore | 100.0 | |
| 3tqh_A | 321 | Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella | 100.0 | |
| 1f8f_A | 371 | Benzyl alcohol dehydrogenase; rossmann fold, oxido | 100.0 | |
| 1yb5_A | 351 | Quinone oxidoreductase; medium-chain dehydrogenase | 100.0 | |
| 2c0c_A | 362 | Zinc binding alcohol dehydrogenase, domain contain | 100.0 | |
| 4eez_A | 348 | Alcohol dehydrogenase 1; site-saturation mutagenes | 100.0 | |
| 1wly_A | 333 | CAAR, 2-haloacrylate reductase; NADPH-dependent ox | 100.0 | |
| 1zsy_A | 357 | Mitochondrial 2-enoyl thioester reductase; medium- | 100.0 | |
| 3two_A | 348 | Mannitol dehydrogenase; cinnamyl-alcohol dehydroge | 100.0 | |
| 3pi7_A | 349 | NADH oxidoreductase; groes-like fold, NAD(P)-bindi | 100.0 | |
| 1gu7_A | 364 | Enoyl-[acyl-carrier-protein] reductase [NADPH, B-s | 100.0 | |
| 1qor_A | 327 | Quinone oxidoreductase; HET: NAP; 2.20A {Escherich | 100.0 | |
| 1h2b_A | 359 | Alcohol dehydrogenase; oxidoreductase, archaea, hy | 100.0 | |
| 1p0f_A | 373 | NADP-dependent alcohol dehydrogenase; ADH topology | 100.0 | |
| 2j3h_A | 345 | NADP-dependent oxidoreductase P1; double bond redu | 100.0 | |
| 2eih_A | 343 | Alcohol dehydrogenase; zinc ION binding protein, s | 100.0 | |
| 1e3i_A | 376 | Alcohol dehydrogenase, class II; HET: NAD; 2.08A { | 100.0 | |
| 2fzw_A | 373 | Alcohol dehydrogenase class III CHI chain; S-nitro | 100.0 | |
| 3jv7_A | 345 | ADH-A; dehydrogenase, nucleotide binding, rossmann | 100.0 | |
| 4a2c_A | 346 | Galactitol-1-phosphate 5-dehydrogenase; oxidoreduc | 100.0 | |
| 2zb4_A | 357 | Prostaglandin reductase 2; rossmann fold, alternat | 100.0 | |
| 1cdo_A | 374 | Alcohol dehydrogenase; oxidoreductase, oxidoreduct | 100.0 | |
| 2jhf_A | 374 | Alcohol dehydrogenase E chain; oxidoreductase, met | 100.0 | |
| 2hcy_A | 347 | Alcohol dehydrogenase 1; tetramer of asymmetric di | 100.0 | |
| 3krt_A | 456 | Crotonyl COA reductase; structural genomics, prote | 100.0 | |
| 4ej6_A | 370 | Putative zinc-binding dehydrogenase; structural ge | 100.0 | |
| 1rjw_A | 339 | ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD | 100.0 | |
| 2d8a_A | 348 | PH0655, probable L-threonine 3-dehydrogenase; pyro | 100.0 | |
| 3nx4_A | 324 | Putative oxidoreductase; csgid, structural genomic | 100.0 | |
| 3goh_A | 315 | Alcohol dehydrogenase, zinc-containing; NP_718042. | 100.0 | |
| 1piw_A | 360 | Hypothetical zinc-type alcohol dehydrogenase- like | 100.0 | |
| 1vj0_A | 380 | Alcohol dehydrogenase, zinc-containing; TM0436, st | 100.0 | |
| 1pl8_A | 356 | Human sorbitol dehydrogenase; NAD, oxidoreductase; | 100.0 | |
| 1e3j_A | 352 | NADP(H)-dependent ketose reductase; oxidoreductase | 100.0 | |
| 4a0s_A | 447 | Octenoyl-COA reductase/carboxylase; oxidoreductase | 100.0 | |
| 2cf5_A | 357 | Atccad5, CAD, cinnamyl alcohol dehydrogenase; lign | 100.0 | |
| 3m6i_A | 363 | L-arabinitol 4-dehydrogenase; medium chain dehydro | 100.0 | |
| 1uuf_A | 369 | YAHK, zinc-type alcohol dehydrogenase-like protein | 100.0 | |
| 2dq4_A | 343 | L-threonine 3-dehydrogenase; NAD-dependent, oxidor | 100.0 | |
| 3fpc_A | 352 | NADP-dependent alcohol dehydrogenase; oxydoreducta | 100.0 | |
| 2h6e_A | 344 | ADH-4, D-arabinose 1-dehydrogenase; rossman fold, | 100.0 | |
| 1jvb_A | 347 | NAD(H)-dependent alcohol dehydrogenase; archaeon, | 100.0 | |
| 3ip1_A | 404 | Alcohol dehydrogenase, zinc-containing; structural | 100.0 | |
| 1v3u_A | 333 | Leukotriene B4 12- hydroxydehydrogenase/prostaglan | 100.0 | |
| 2vn8_A | 375 | Reticulon-4-interacting protein 1; mitochondrion, | 100.0 | |
| 1xa0_A | 328 | Putative NADPH dependent oxidoreductases; structur | 100.0 | |
| 1tt7_A | 330 | YHFP; alcohol dehydrogenase, Zn-dependent, NAD, st | 100.0 | |
| 1yqd_A | 366 | Sinapyl alcohol dehydrogenase; lignin, monolignol, | 100.0 | |
| 2dph_A | 398 | Formaldehyde dismutase; dismutation of aldehydes, | 100.0 | |
| 2b5w_A | 357 | Glucose dehydrogenase; nucleotide binding motif, o | 100.0 | |
| 1kol_A | 398 | Formaldehyde dehydrogenase; oxidoreductase; HET: N | 100.0 | |
| 3iup_A | 379 | Putative NADPH:quinone oxidoreductase; YP_296108.1 | 100.0 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 100.0 | |
| 1iz0_A | 302 | Quinone oxidoreductase; APO-enzyme, riken structur | 100.0 | |
| 2cdc_A | 366 | Glucose dehydrogenase glucose 1-dehydrogenase, DHG | 100.0 | |
| 2vz8_A | 2512 | Fatty acid synthase; transferase, phosphopantethei | 100.0 | |
| 1pqw_A | 198 | Polyketide synthase; rossmann fold, dimer, structu | 99.92 | |
| 1pjc_A | 361 | Protein (L-alanine dehydrogenase); oxidoreductase, | 98.92 | |
| 1gpj_A | 404 | Glutamyl-tRNA reductase; tRNA-dependent tetrapyrro | 98.87 | |
| 2vhw_A | 377 | Alanine dehydrogenase; NAD, secreted, oxidoreducta | 98.79 | |
| 2eez_A | 369 | Alanine dehydrogenase; TTHA0216, structural genomi | 98.78 | |
| 1l7d_A | 384 | Nicotinamide nucleotide transhydrogenase, subunit | 98.7 | |
| 3ce6_A | 494 | Adenosylhomocysteinase; protein-substrate complex, | 98.55 | |
| 1x13_A | 401 | NAD(P) transhydrogenase subunit alpha; NAD(H)-bind | 98.43 | |
| 4fgs_A | 273 | Probable dehydrogenase protein; PSI-biology, nysgr | 98.4 | |
| 3oj0_A | 144 | Glutr, glutamyl-tRNA reductase; structural genomic | 98.24 | |
| 2yvl_A | 248 | TRMI protein, hypothetical protein; tRNA, methyltr | 98.22 | |
| 3f9i_A | 249 | 3-oxoacyl-[acyl-carrier-protein] reductase; 3-keto | 98.16 | |
| 4eso_A | 255 | Putative oxidoreductase; NADP, structural genomics | 98.16 | |
| 3ged_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.15 | |
| 3ic5_A | 118 | Putative saccharopine dehydrogenase; structural ge | 98.15 | |
| 4fn4_A | 254 | Short chain dehydrogenase; NADH-binding, rossmann | 98.1 | |
| 3grp_A | 266 | 3-oxoacyl-(acyl carrierprotein) reductase; structu | 98.09 | |
| 4e6p_A | 259 | Probable sorbitol dehydrogenase (L-iditol 2-dehyd; | 98.09 | |
| 3rwb_A | 247 | TPLDH, pyridoxal 4-dehydrogenase; short chain dehy | 98.09 | |
| 4g81_D | 255 | Putative hexonate dehydrogenase; enzyme function i | 98.08 | |
| 4dyv_A | 272 | Short-chain dehydrogenase/reductase SDR; structura | 98.07 | |
| 4dry_A | 281 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 98.06 | |
| 4b79_A | 242 | PA4098, probable short-chain dehydrogenase; oxidor | 98.05 | |
| 3p2y_A | 381 | Alanine dehydrogenase/pyridine nucleotide transhy; | 98.05 | |
| 3gvc_A | 277 | Oxidoreductase, probable short-chain type dehydrog | 98.05 | |
| 4dio_A | 405 | NAD(P) transhydrogenase subunit alpha PART 1; stru | 98.05 | |
| 3tzq_B | 271 | Short-chain type dehydrogenase/reductase; ssgcid, | 98.05 | |
| 2a4k_A | 263 | 3-oxoacyl-[acyl carrier protein] reductase; reduct | 98.04 | |
| 3dii_A | 247 | Short-chain dehydrogenase/reductase SDR; SCOR, ros | 98.01 | |
| 3tjr_A | 301 | Short chain dehydrogenase; structural genomics, se | 97.98 | |
| 3m1a_A | 281 | Putative dehydrogenase; short, PSI, MCSG, structur | 97.98 | |
| 2z1n_A | 260 | Dehydrogenase; reductase, SDR, oxidoreductase; 1.8 | 97.98 | |
| 3ioy_A | 319 | Short-chain dehydrogenase/reductase SDR; structura | 97.97 | |
| 1hxh_A | 253 | 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-b | 97.96 | |
| 3fpf_A | 298 | Mtnas, putative uncharacterized protein; thermonic | 97.95 | |
| 1nff_A | 260 | Putative oxidoreductase RV2002; directed evolution | 97.95 | |
| 1iy8_A | 267 | Levodione reductase; oxidoreductase; HET: NAD; 1.6 | 97.95 | |
| 4fs3_A | 256 | Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; | 97.95 | |
| 1g0o_A | 283 | Trihydroxynaphthalene reductase; protein-NADPH-act | 97.94 | |
| 2gdz_A | 267 | NAD+-dependent 15-hydroxyprostaglandin dehydrogen; | 97.94 | |
| 3rkr_A | 262 | Short chain oxidoreductase; rossmann fold; HET: NA | 97.94 | |
| 3r6d_A | 221 | NAD-dependent epimerase/dehydratase; structural ge | 97.93 | |
| 3gvp_A | 435 | Adenosylhomocysteinase 3; protein CO-factor comple | 97.92 | |
| 3asu_A | 248 | Short-chain dehydrogenase/reductase SDR; SDR famil | 97.92 | |
| 1xg5_A | 279 | ARPG836; short chain dehydrogenase, human, SGC, st | 97.92 | |
| 3ucx_A | 264 | Short chain dehydrogenase; ssgcid, seattle structu | 97.92 | |
| 1o54_A | 277 | SAM-dependent O-methyltransferase; TM0748, structu | 97.91 | |
| 3svt_A | 281 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.91 | |
| 3gem_A | 260 | Short chain dehydrogenase; structural genomics, AP | 97.91 | |
| 4gkb_A | 258 | 3-oxoacyl-[acyl-carrier protein] reductase; putati | 97.9 | |
| 2wsb_A | 254 | Galactitol dehydrogenase; oxidoreductase, SDR, ros | 97.9 | |
| 1zem_A | 262 | Xylitol dehydrogenase; rossmann fold, dinucleotide | 97.89 | |
| 1geg_A | 256 | Acetoin reductase; SDR family, oxidoreductase; HET | 97.89 | |
| 3o26_A | 311 | Salutaridine reductase; short chain dehydrogenase/ | 97.89 | |
| 3e8x_A | 236 | Putative NAD-dependent epimerase/dehydratase; stru | 97.89 | |
| 1uls_A | 245 | Putative 3-oxoacyl-acyl carrier protein reductase; | 97.89 | |
| 2ew8_A | 249 | (S)-1-phenylethanol dehydrogenase; transferase; 2. | 97.88 | |
| 1spx_A | 278 | Short-chain reductase family member (5L265); paral | 97.88 | |
| 1xhl_A | 297 | Short-chain dehydrogenase/reductase family member | 97.88 | |
| 3ak4_A | 263 | NADH-dependent quinuclidinone reductase; SDR, (R)- | 97.88 | |
| 1x1t_A | 260 | D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, S | 97.87 | |
| 2uvd_A | 246 | 3-oxoacyl-(acyl-carrier-protein) reductase; beta-k | 97.87 | |
| 3op4_A | 248 | 3-oxoacyl-[acyl-carrier protein] reductase; 3-keto | 97.86 | |
| 3n74_A | 261 | 3-ketoacyl-(acyl-carrier-protein) reductase; seatt | 97.85 | |
| 3rd5_A | 291 | Mypaa.01249.C; ssgcid, structural genomics, seattl | 97.85 | |
| 4egf_A | 266 | L-xylulose reductase; structural genomics, ssgcid, | 97.85 | |
| 3oig_A | 266 | Enoyl-[acyl-carrier-protein] reductase [NADH]; fat | 97.85 | |
| 3l6e_A | 235 | Oxidoreductase, short-chain dehydrogenase/reducta; | 97.85 | |
| 1wma_A | 276 | Carbonyl reductase [NADPH] 1; oxidoreductase; HET: | 97.85 | |
| 2ehd_A | 234 | Oxidoreductase, oxidoreductase, short-chain dehydr | 97.84 | |
| 4dqx_A | 277 | Probable oxidoreductase protein; structural genomi | 97.84 | |
| 4hp8_A | 247 | 2-deoxy-D-gluconate 3-dehydrogenase; enzyme functi | 97.83 | |
| 2g1u_A | 155 | Hypothetical protein TM1088A; structural genomics, | 97.83 | |
| 3v2g_A | 271 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.83 | |
| 1zk4_A | 251 | R-specific alcohol dehydrogenase; short chain redu | 97.82 | |
| 3rku_A | 287 | Oxidoreductase YMR226C; substrate fingerprint, sho | 97.82 | |
| 1hdc_A | 254 | 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxi | 97.81 | |
| 3oid_A | 258 | Enoyl-[acyl-carrier-protein] reductase [NADPH]; fa | 97.81 | |
| 3zv4_A | 281 | CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; ox | 97.8 | |
| 4imr_A | 275 | 3-oxoacyl-(acyl-carrier-protein) reductase; oxidor | 97.8 | |
| 2ekp_A | 239 | 2-deoxy-D-gluconate 3-dehydrogenase; structural ge | 97.8 | |
| 3kvo_A | 346 | Hydroxysteroid dehydrogenase-like protein 2; HSDL2 | 97.8 | |
| 1yb1_A | 272 | 17-beta-hydroxysteroid dehydrogenase type XI; shor | 97.79 | |
| 2nwq_A | 272 | Probable short-chain dehydrogenase; oxidoreductase | 97.79 | |
| 3is3_A | 270 | 17BETA-hydroxysteroid dehydrogenase; short chain d | 97.79 | |
| 2gn4_A | 344 | FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann | 97.79 | |
| 3imf_A | 257 | Short chain dehydrogenase; structural genomics, in | 97.78 | |
| 3tfo_A | 264 | Putative 3-oxoacyl-(acyl-carrier-protein) reducta; | 97.78 | |
| 3d3w_A | 244 | L-xylulose reductase; uronate cycle, short-chain d | 97.77 | |
| 1gee_A | 261 | Glucose 1-dehydrogenase; short-chain dehydrogenase | 97.77 | |
| 3orf_A | 251 | Dihydropteridine reductase; alpha-beta-alpha sandw | 97.76 | |
| 3d4o_A | 293 | Dipicolinate synthase subunit A; NP_243269.1, stru | 97.76 | |
| 3pgx_A | 280 | Carveol dehydrogenase; structural genomics, seattl | 97.76 | |
| 3ijr_A | 291 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.76 | |
| 1xq1_A | 266 | Putative tropinone reducatse; structural genomics, | 97.76 | |
| 1vl8_A | 267 | Gluconate 5-dehydrogenase; TM0441, structural geno | 97.74 | |
| 3tpc_A | 257 | Short chain alcohol dehydrogenase-related dehydro; | 97.74 | |
| 2pd6_A | 264 | Estradiol 17-beta-dehydrogenase 8; short-chain deh | 97.74 | |
| 1xu9_A | 286 | Corticosteroid 11-beta-dehydrogenase, isozyme 1; h | 97.73 | |
| 3ppi_A | 281 | 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, de | 97.73 | |
| 2jah_A | 247 | Clavulanic acid dehydrogenase; short-chain dehydro | 97.72 | |
| 3n58_A | 464 | Adenosylhomocysteinase; ssgcid, hydrolase, structu | 97.72 | |
| 3ai3_A | 263 | NADPH-sorbose reductase; rossmann-fold, NADPH-depe | 97.72 | |
| 1fmc_A | 255 | 7 alpha-hydroxysteroid dehydrogenase; short-chain | 97.72 | |
| 3pxx_A | 287 | Carveol dehydrogenase; structural genomics, seattl | 97.72 | |
| 3h7a_A | 252 | Short chain dehydrogenase; oxidoreductase, PSI-2, | 97.72 | |
| 3edm_A | 259 | Short chain dehydrogenase; structural genomics, ox | 97.71 | |
| 3grk_A | 293 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.71 | |
| 2o23_A | 265 | HADH2 protein; HSD17B10, schad, ERAB, type II HADH | 97.71 | |
| 3nyw_A | 250 | Putative oxidoreductase; fatty acid synthesis,3-ox | 97.7 | |
| 3u5t_A | 267 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.7 | |
| 3r1i_A | 276 | Short-chain type dehydrogenase/reductase; structur | 97.7 | |
| 2rhc_B | 277 | Actinorhodin polyketide ketoreductase; oxidoreduct | 97.7 | |
| 1yde_A | 270 | Retinal dehydrogenase/reductase 3; oxidoreductase, | 97.7 | |
| 3uce_A | 223 | Dehydrogenase; rossmann fold, oxidoreductase; HET: | 97.69 | |
| 3pk0_A | 262 | Short-chain dehydrogenase/reductase SDR; ssgcid, s | 97.69 | |
| 3rih_A | 293 | Short chain dehydrogenase or reductase; structural | 97.69 | |
| 3k31_A | 296 | Enoyl-(acyl-carrier-protein) reductase; ssgcid, NI | 97.69 | |
| 2pd4_A | 275 | Enoyl-[acyl-carrier-protein] reductase [NADH]; ant | 97.69 | |
| 3l77_A | 235 | Short-chain alcohol dehydrogenase; oxidoreductase; | 97.69 | |
| 3guy_A | 230 | Short-chain dehydrogenase/reductase SDR; structura | 97.69 | |
| 3f1l_A | 252 | Uncharacterized oxidoreductase YCIK; E. coli, NADP | 97.69 | |
| 3tsc_A | 277 | Putative oxidoreductase; structural genomics, seat | 97.69 | |
| 2q2v_A | 255 | Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidore | 97.68 | |
| 1zmt_A | 254 | Haloalcohol dehalogenase HHEC; halohydrin dehaloge | 97.68 | |
| 3sju_A | 279 | Keto reductase; short-chain dehydrogenase, oxidore | 97.68 | |
| 4da9_A | 280 | Short-chain dehydrogenase/reductase; structural ge | 97.68 | |
| 3sx2_A | 278 | Putative 3-ketoacyl-(acyl-carrier-protein) reduct; | 97.68 | |
| 3lyl_A | 247 | 3-oxoacyl-(acyl-carrier-protein) reductase; alpha | 97.68 | |
| 2ph3_A | 245 | 3-oxoacyl-[acyl carrier protein] reductase; TTHA04 | 97.67 | |
| 3qiv_A | 253 | Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR | 97.67 | |
| 3v8b_A | 283 | Putative dehydrogenase, possibly 3-oxoacyl-[acyl- | 97.67 | |
| 2c07_A | 285 | 3-oxoacyl-(acyl-carrier protein) reductase; oxidor | 97.67 | |
| 2x9g_A | 288 | PTR1, pteridine reductase; short chain dehydrogena | 97.67 | |
| 1ae1_A | 273 | Tropinone reductase-I; oxidoreductase, tropane alk | 97.67 | |
| 3ftp_A | 270 | 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid | 97.66 | |
| 3ksu_A | 262 | 3-oxoacyl-acyl carrier protein reductase; structur | 97.65 | |
| 2ae2_A | 260 | Protein (tropinone reductase-II); oxidoreductase, | 97.65 | |
| 1cyd_A | 244 | Carbonyl reductase; short-chain dehydrogenase, oxi | 97.65 | |
| 1o5i_A | 249 | 3-oxoacyl-(acyl carrier protein) reductase; TM1169 | 97.64 | |
| 2rir_A | 300 | Dipicolinate synthase, A chain; structural genomic | 97.64 | |
| 1zmo_A | 244 | Halohydrin dehalogenase; haloalcohol dehalogenase, | 97.64 | |
| 3tox_A | 280 | Short chain dehydrogenase; structural genomics, PS | 97.63 | |
| 3t4x_A | 267 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.63 | |
| 3h2s_A | 224 | Putative NADH-flavin reductase; Q03B84, NESG, LCR1 | 97.63 | |
| 4fc7_A | 277 | Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossman | 97.62 | |
| 3gaf_A | 256 | 7-alpha-hydroxysteroid dehydrogenase; seattle stru | 97.62 | |
| 2hq1_A | 247 | Glucose/ribitol dehydrogenase; CTH-1438, structura | 97.62 | |
| 1edo_A | 244 | Beta-keto acyl carrier protein reductase; nucleoti | 97.62 | |
| 1xkq_A | 280 | Short-chain reductase family member (5D234); parra | 97.61 | |
| 2h7i_A | 269 | Enoyl-[acyl-carrier-protein] reductase [NADH]; oxi | 97.61 | |
| 3ond_A | 488 | Adenosylhomocysteinase; plant protein, enzyme-subs | 97.61 | |
| 2b4q_A | 276 | Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier | 97.61 | |
| 3lf2_A | 265 | Short chain oxidoreductase Q9HYA2; SDR, SCOR, ross | 97.6 | |
| 3ew7_A | 221 | LMO0794 protein; Q8Y8U8_lismo, putative NAD-depend | 97.6 | |
| 2d1y_A | 256 | Hypothetical protein TT0321; strucrtural genomics, | 97.6 | |
| 3cxt_A | 291 | Dehydrogenase with different specificities; rossma | 97.59 | |
| 3ctm_A | 279 | Carbonyl reductase; alcohol dehydrogenase, short-c | 97.59 | |
| 1ooe_A | 236 | Dihydropteridine reductase; structural genomics, P | 97.59 | |
| 2zat_A | 260 | Dehydrogenase/reductase SDR family member 4; alpha | 97.58 | |
| 3r3s_A | 294 | Oxidoreductase; structural genomics, csgid, center | 97.58 | |
| 3i1j_A | 247 | Oxidoreductase, short chain dehydrogenase/reducta; | 97.58 | |
| 1uzm_A | 247 | 3-oxoacyl-[acyl-carrier protein] reductase; beta-k | 97.58 | |
| 3awd_A | 260 | GOX2181, putative polyol dehydrogenase; oxidoreduc | 97.57 | |
| 2fwm_X | 250 | 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; e | 97.57 | |
| 3dqp_A | 219 | Oxidoreductase YLBE; alpha-beta protein., structur | 97.57 | |
| 1sby_A | 254 | Alcohol dehydrogenase; ternary complex, NAD, trifl | 97.57 | |
| 1fjh_A | 257 | 3alpha-hydroxysteroid dehydrogenase/carbonyl reduc | 97.57 | |
| 3p19_A | 266 | BFPVVD8, putative blue fluorescent protein; rossma | 97.57 | |
| 4ibo_A | 271 | Gluconate dehydrogenase; enzyme function initiativ | 97.57 | |
| 3c85_A | 183 | Putative glutathione-regulated potassium-efflux S | 97.56 | |
| 1dhr_A | 241 | Dihydropteridine reductase; oxidoreductase(acting | 97.56 | |
| 1mxh_A | 276 | Pteridine reductase 2; SDR topology, protein-subst | 97.56 | |
| 2qq5_A | 260 | DHRS1, dehydrogenase/reductase SDR family member 1 | 97.56 | |
| 3qvo_A | 236 | NMRA family protein; structural genomics, PSI-biol | 97.56 | |
| 2ag5_A | 246 | DHRS6, dehydrogenase/reductase (SDR family) member | 97.55 | |
| 2bgk_A | 278 | Rhizome secoisolariciresinol dehydrogenase; oxidor | 97.54 | |
| 2pnf_A | 248 | 3-oxoacyl-[acyl-carrier-protein] reductase; short | 97.53 | |
| 1h5q_A | 265 | NADP-dependent mannitol dehydrogenase; oxidoreduct | 97.53 | |
| 2cfc_A | 250 | 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidor | 97.53 | |
| 1qsg_A | 265 | Enoyl-[acyl-carrier-protein] reductase; enoyl redu | 97.51 | |
| 1w6u_A | 302 | 2,4-dienoyl-COA reductase, mitochondrial precursor | 97.5 | |
| 3afn_B | 258 | Carbonyl reductase; alpha/beta/alpha, rossmann-fol | 97.5 | |
| 1oaa_A | 259 | Sepiapterin reductase; tetrahydrobiopterin, oxidor | 97.49 | |
| 3e48_A | 289 | Putative nucleoside-diphosphate-sugar epimerase; a | 97.49 | |
| 3a28_C | 258 | L-2.3-butanediol dehydrogenase; chiral substrate r | 97.48 | |
| 2dtx_A | 264 | Glucose 1-dehydrogenase related protein; rossmann | 97.48 | |
| 3o38_A | 266 | Short chain dehydrogenase; tuberculosis, ortholog | 97.47 | |
| 3sc4_A | 285 | Short chain dehydrogenase (A0QTM2 homolog); ssgcid | 97.46 | |
| 1yxm_A | 303 | Pecra, peroxisomal trans 2-enoyl COA reductase; pe | 97.45 | |
| 3v2h_A | 281 | D-beta-hydroxybutyrate dehydrogenase; structural g | 97.45 | |
| 3ezl_A | 256 | Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA | 97.45 | |
| 3uxy_A | 266 | Short-chain dehydrogenase/reductase SDR; structura | 97.43 | |
| 3kzv_A | 254 | Uncharacterized oxidoreductase YIR035C; cytoplasmi | 97.43 | |
| 3enk_A | 341 | UDP-glucose 4-epimerase; seattle structural genomi | 97.42 | |
| 3uve_A | 286 | Carveol dehydrogenase ((+)-trans-carveol dehydrog; | 97.42 | |
| 3dhn_A | 227 | NAD-dependent epimerase/dehydratase; reductase, PF | 97.42 | |
| 3e03_A | 274 | Short chain dehydrogenase; structural genomics, PS | 97.4 | |
| 1e7w_A | 291 | Pteridine reductase; dihydrofolate reductase, shor | 97.4 | |
| 1gz6_A | 319 | Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MF | 97.4 | |
| 4dmm_A | 269 | 3-oxoacyl-[acyl-carrier-protein] reductase; rossma | 97.4 | |
| 3oml_A | 613 | GH14720P, peroxisomal multifunctional enzyme type | 97.4 | |
| 3s55_A | 281 | Putative short-chain dehydrogenase/reductase; stru | 97.39 | |
| 2nm0_A | 253 | Probable 3-oxacyl-(acyl-carrier-protein) reductas; | 97.38 | |
| 1lu9_A | 287 | Methylene tetrahydromethanopterin dehydrogenase; a | 97.38 | |
| 4iin_A | 271 | 3-ketoacyl-acyl carrier protein reductase (FABG); | 97.38 | |
| 1ja9_A | 274 | 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; p | 97.38 | |
| 3fwz_A | 140 | Inner membrane protein YBAL; TRKA-N domain, E.coli | 97.38 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 97.38 | |
| 2bd0_A | 244 | Sepiapterin reductase; oxidoreductase; HET: NAP BI | 97.38 | |
| 3t7c_A | 299 | Carveol dehydrogenase; structural genomics, seattl | 97.37 | |
| 3uf0_A | 273 | Short-chain dehydrogenase/reductase SDR; gluconate | 97.37 | |
| 3e9n_A | 245 | Putative short-chain dehydrogenase/reductase; stru | 97.37 | |
| 4h15_A | 261 | Short chain alcohol dehydrogenase-related dehydro; | 97.37 | |
| 2wyu_A | 261 | Enoyl-[acyl carrier protein] reductase; oxidoreduc | 97.36 | |
| 2qhx_A | 328 | Pteridine reductase 1; oxidoreductase, short-chain | 97.35 | |
| 1hdo_A | 206 | Biliverdin IX beta reductase; foetal metabolism, H | 97.35 | |
| 3ek2_A | 271 | Enoyl-(acyl-carrier-protein) reductase (NADH); ssg | 97.34 | |
| 3u9l_A | 324 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.34 | |
| 3ruf_A | 351 | WBGU; rossmann fold, UDP-hexose 4-epimerase, isome | 97.32 | |
| 3llv_A | 141 | Exopolyphosphatase-related protein; NAD(P)-binding | 97.3 | |
| 1yo6_A | 250 | Putative carbonyl reductase sniffer; tyrosine-depe | 97.29 | |
| 3nrc_A | 280 | Enoyl-[acyl-carrier-protein] reductase (NADH); ros | 97.29 | |
| 2p91_A | 285 | Enoyl-[acyl-carrier-protein] reductase [NADH]; NAD | 97.29 | |
| 3oec_A | 317 | Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; | 97.28 | |
| 3s8m_A | 422 | Enoyl-ACP reductase; rossmann fold, oxidoreductase | 97.27 | |
| 3vtz_A | 269 | Glucose 1-dehydrogenase; rossmann fold, oxidoreduc | 97.27 | |
| 3osu_A | 246 | 3-oxoacyl-[acyl-carrier-protein] reductase; struct | 97.25 | |
| 1sny_A | 267 | Sniffer CG10964-PA; alpha and beta protein, rossma | 97.25 | |
| 3h9u_A | 436 | Adenosylhomocysteinase; NAD CO-factor complex, str | 97.25 | |
| 2jl1_A | 287 | Triphenylmethane reductase; oxidoreductase, biorem | 97.24 | |
| 4e3z_A | 272 | Putative oxidoreductase protein; PSI-biology, stru | 97.24 | |
| 3dr5_A | 221 | Putative O-methyltransferase; Q8NRD3, CGL1119, PF0 | 97.24 | |
| 2zcu_A | 286 | Uncharacterized oxidoreductase YTFG; alpha-beta sa | 97.22 | |
| 2bka_A | 242 | CC3, TAT-interacting protein TIP30; NADPH, PEG600, | 97.21 | |
| 3qlj_A | 322 | Short chain dehydrogenase; structural genomics, se | 97.2 | |
| 2dkn_A | 255 | 3-alpha-hydroxysteroid dehydrogenase; oxidoreducta | 97.2 | |
| 3tfw_A | 248 | Putative O-methyltransferase; PSI-biology, nysgrc, | 97.19 | |
| 3njr_A | 204 | Precorrin-6Y methylase; methyltransferase, decarbo | 97.17 | |
| 3tnl_A | 315 | Shikimate dehydrogenase; structural genomics, cent | 97.17 | |
| 2hmt_A | 144 | YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane | 97.17 | |
| 3tl3_A | 257 | Short-chain type dehydrogenase/reductase; ssgcid, | 97.16 | |
| 3icc_A | 255 | Putative 3-oxoacyl-(acyl carrier protein) reducta; | 97.14 | |
| 3gdg_A | 267 | Probable NADP-dependent mannitol dehydrogenase; ro | 97.14 | |
| 3gk3_A | 269 | Acetoacetyl-COA reductase; acetoacetyl-CO reductas | 97.14 | |
| 2z1m_A | 345 | GDP-D-mannose dehydratase; short-chain dehydrogena | 97.12 | |
| 3un1_A | 260 | Probable oxidoreductase; structural genomics, PSI- | 97.12 | |
| 2x4g_A | 342 | Nucleoside-diphosphate-sugar epimerase; isomerase; | 97.09 | |
| 3d7l_A | 202 | LIN1944 protein; APC89317, structural genomics, PS | 97.09 | |
| 3sxp_A | 362 | ADP-L-glycero-D-mannoheptose-6-epimerase; rossman | 97.08 | |
| 3i4f_A | 264 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 97.08 | |
| 1xq6_A | 253 | Unknown protein; structural genomics, protein stru | 97.08 | |
| 3jyo_A | 283 | Quinate/shikimate dehydrogenase; enzyme-cofactor c | 97.08 | |
| 3cbg_A | 232 | O-methyltransferase; cyanobacterium; HET: SAH FER | 97.03 | |
| 3m2p_A | 311 | UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J | 97.02 | |
| 2nyu_A | 196 | Putative ribosomal RNA methyltransferase 2; SAM, s | 97.01 | |
| 2hnk_A | 239 | SAM-dependent O-methyltransferase; modified rossma | 96.98 | |
| 1lss_A | 140 | TRK system potassium uptake protein TRKA homolog; | 96.97 | |
| 3hem_A | 302 | Cyclopropane-fatty-acyl-phospholipid synthase 2; p | 96.97 | |
| 2gpy_A | 233 | O-methyltransferase; structural genomics, PSI, pro | 96.96 | |
| 3mb5_A | 255 | SAM-dependent methyltransferase; RNA methyltransfe | 96.95 | |
| 1nyt_A | 271 | Shikimate 5-dehydrogenase; alpha/beta domains, WID | 96.95 | |
| 2ydy_A | 315 | Methionine adenosyltransferase 2 subunit beta; oxi | 96.95 | |
| 4iiu_A | 267 | 3-oxoacyl-[acyl-carrier protein] reductase; struct | 96.94 | |
| 2wm3_A | 299 | NMRA-like family domain containing protein 1; unkn | 96.94 | |
| 3abi_A | 365 | Putative uncharacterized protein PH1688; L-lysine | 96.93 | |
| 3zu3_A | 405 | Putative reductase YPO4104/Y4119/YP_4011; oxidored | 96.92 | |
| 2et6_A | 604 | (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-ox | 96.92 | |
| 2yut_A | 207 | Putative short-chain oxidoreductase; alpha and bet | 96.91 | |
| 1wwk_A | 307 | Phosphoglycerate dehydrogenase; riken structural g | 96.91 | |
| 1ek6_A | 348 | UDP-galactose 4-epimerase; short-chain dehydrogena | 96.91 | |
| 2gas_A | 307 | Isoflavone reductase; NADPH-dependent reductase, o | 96.91 | |
| 3u0b_A | 454 | Oxidoreductase, short chain dehydrogenase/reducta | 96.9 | |
| 4ina_A | 405 | Saccharopine dehydrogenase; structural genomics, P | 96.9 | |
| 1p91_A | 269 | Ribosomal RNA large subunit methyltransferase A; R | 96.89 | |
| 3i6i_A | 346 | Putative leucoanthocyanidin reductase 1; rossmann | 96.88 | |
| 3slg_A | 372 | PBGP3 protein; structural genomics, seattle struct | 96.87 | |
| 3e05_A | 204 | Precorrin-6Y C5,15-methyltransferase (decarboxyla; | 96.87 | |
| 1sb8_A | 352 | WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCN | 96.86 | |
| 1jtv_A | 327 | 17 beta-hydroxysteroid dehydrogenase type 1; stero | 96.86 | |
| 4eue_A | 418 | Putative reductase CA_C0462; TER, biofuel, synthet | 96.84 | |
| 2q1w_A | 333 | Putative nucleotide sugar epimerase/ dehydratase; | 96.84 | |
| 3cea_A | 346 | MYO-inositol 2-dehydrogenase; NP_786804.1, oxidore | 96.82 | |
| 2fk8_A | 318 | Methoxy mycolic acid synthase 4; S-adenosylmethion | 96.82 | |
| 1rpn_A | 335 | GDP-mannose 4,6-dehydratase; short-chain dehydroge | 96.81 | |
| 3lbf_A | 210 | Protein-L-isoaspartate O-methyltransferase; modifi | 96.81 | |
| 2axq_A | 467 | Saccharopine dehydrogenase; rossmann fold variant, | 96.8 | |
| 1qyd_A | 313 | Pinoresinol-lariciresinol reductase; NADPH-depende | 96.8 | |
| 1y1p_A | 342 | ARII, aldehyde reductase II; rossmann fold, short | 96.79 | |
| 1sui_A | 247 | Caffeoyl-COA O-methyltransferase; rossmann fold, p | 96.78 | |
| 3nzo_A | 399 | UDP-N-acetylglucosamine 4,6-dehydratase; structura | 96.77 | |
| 2yxe_A | 215 | Protein-L-isoaspartate O-methyltransferase; rossma | 96.77 | |
| 2egg_A | 297 | AROE, shikimate 5-dehydrogenase; dimer, X-RAY diff | 96.75 | |
| 1jg1_A | 235 | PIMT;, protein-L-isoaspartate O-methyltransferase; | 96.75 | |
| 3c3y_A | 237 | Pfomt, O-methyltransferase; plant secondary metabo | 96.74 | |
| 1xgk_A | 352 | Nitrogen metabolite repression regulator NMRA; ros | 96.73 | |
| 4id9_A | 347 | Short-chain dehydrogenase/reductase; putative dehy | 96.72 | |
| 1vl0_A | 292 | DTDP-4-dehydrorhamnose reductase, RFBD ortholog; s | 96.72 | |
| 2avd_A | 229 | Catechol-O-methyltransferase; structural genomics, | 96.71 | |
| 2pk3_A | 321 | GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, shor | 96.71 | |
| 2nxc_A | 254 | L11 mtase, ribosomal protein L11 methyltransferase | 96.71 | |
| 2bll_A | 345 | Protein YFBG; decarboxylase, short chain dehydroge | 96.71 | |
| 3hm2_A | 178 | Precorrin-6Y C5,15-methyltransferase; alpha-beta-s | 96.7 | |
| 2yy7_A | 312 | L-threonine dehydrogenase; thermolabIle, flavobact | 96.7 | |
| 3grz_A | 205 | L11 mtase, ribosomal protein L11 methyltransferase | 96.69 | |
| 3duw_A | 223 | OMT, O-methyltransferase, putative; alternating of | 96.68 | |
| 1uay_A | 242 | Type II 3-hydroxyacyl-COA dehydrogenase; beta oxid | 96.68 | |
| 3mje_A | 496 | AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1. | 96.68 | |
| 3t4e_A | 312 | Quinate/shikimate dehydrogenase; structural genomi | 96.68 | |
| 3ius_A | 286 | Uncharacterized conserved protein; APC63810, silic | 96.67 | |
| 2ekl_A | 313 | D-3-phosphoglycerate dehydrogenase; structural gen | 96.66 | |
| 2pwy_A | 258 | TRNA (adenine-N(1)-)-methyltransferase; mtase, ado | 96.66 | |
| 2z5l_A | 511 | Tylkr1, tylactone synthase starter module and modu | 96.65 | |
| 3d64_A | 494 | Adenosylhomocysteinase; structural genomics, ssgci | 96.64 | |
| 3c1o_A | 321 | Eugenol synthase; phenylpropene, PIP reductase, sh | 96.63 | |
| 2z2v_A | 365 | Hypothetical protein PH1688; L-lysine dehydrogenas | 96.61 | |
| 1jay_A | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossma | 96.6 | |
| 3orh_A | 236 | Guanidinoacetate N-methyltransferase; structura ge | 96.6 | |
| 3ujc_A | 266 | Phosphoethanolamine N-methyltransferase; parasite; | 96.6 | |
| 1qyc_A | 308 | Phenylcoumaran benzylic ether reductase PT1; NADPH | 96.59 | |
| 1rkx_A | 357 | CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; | 96.58 | |
| 3tr6_A | 225 | O-methyltransferase; cellular processes; HET: SAH; | 96.57 | |
| 3rft_A | 267 | Uronate dehydrogenase; apoenzyme, rossmann fold, N | 96.54 | |
| 2pzm_A | 330 | Putative nucleotide sugar epimerase/ dehydratase; | 96.53 | |
| 1c1d_A | 355 | L-phenylalanine dehydrogenase; amino acid dehydrog | 96.53 | |
| 2fr1_A | 486 | Erythromycin synthase, eryai; short chain dehydrog | 96.53 | |
| 1v8b_A | 479 | Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2 | 96.51 | |
| 2glx_A | 332 | 1,5-anhydro-D-fructose reductase; NADP(H) dependen | 96.5 | |
| 2r6j_A | 318 | Eugenol synthase 1; phenylpropene, PIP reductase, | 96.5 | |
| 1kpg_A | 287 | CFA synthase;, cyclopropane-fatty-acyl-phospholipi | 96.5 | |
| 4e4y_A | 244 | Short chain dehydrogenase family protein; structur | 96.5 | |
| 3qp9_A | 525 | Type I polyketide synthase pikaii; rossmann fold, | 96.49 | |
| 1gy8_A | 397 | UDP-galactose 4-epimerase; oxidoreductase; HET: NA | 96.49 | |
| 1jw9_B | 249 | Molybdopterin biosynthesis MOEB protein; MOEB: mod | 96.47 | |
| 1n7h_A | 381 | GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, | 96.46 | |
| 2g76_A | 335 | 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidor | 96.45 | |
| 3eey_A | 197 | Putative rRNA methylase; rRNA methylation, S-adeno | 96.45 | |
| 1id1_A | 153 | Putative potassium channel protein; RCK domain, E. | 96.44 | |
| 3vps_A | 321 | TUNA, NAD-dependent epimerase/dehydratase; tunicam | 96.42 | |
| 2dbq_A | 334 | Glyoxylate reductase; D-3-phosphoglycerate dehydro | 96.42 | |
| 3pwz_A | 272 | Shikimate dehydrogenase 3; alpha-beta, oxidoreduct | 96.41 | |
| 3ko8_A | 312 | NAD-dependent epimerase/dehydratase; isomerase, UD | 96.41 | |
| 1i9g_A | 280 | Hypothetical protein RV2118C; mtase, adoMet, cryst | 96.4 | |
| 1l3i_A | 192 | Precorrin-6Y methyltransferase/putative decarboxyl | 96.4 | |
| 3mti_A | 185 | RRNA methylase; SAM-dependent, PSI, MCSG, structur | 96.38 | |
| 3sc6_A | 287 | DTDP-4-dehydrorhamnose reductase; RFBD, structural | 96.38 | |
| 3phh_A | 269 | Shikimate dehydrogenase; shikimate pathway, helico | 96.36 | |
| 3o8q_A | 281 | Shikimate 5-dehydrogenase I alpha; structural geno | 96.36 | |
| 1db3_A | 372 | GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lya | 96.35 | |
| 2ggs_A | 273 | 273AA long hypothetical DTDP-4-dehydrorhamnose red | 96.35 | |
| 1oc2_A | 348 | DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnos | 96.35 | |
| 1ff9_A | 450 | Saccharopine reductase; lysine biosynthesis, alpha | 96.33 | |
| 2q1s_A | 377 | Putative nucleotide sugar epimerase/ dehydratase; | 96.33 | |
| 1u7z_A | 226 | Coenzyme A biosynthesis bifunctional protein coabc | 96.32 | |
| 3q2i_A | 354 | Dehydrogenase; rossmann fold, UDP-sugar binding, N | 96.32 | |
| 1kew_A | 361 | RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fo | 96.31 | |
| 1t2a_A | 375 | GDP-mannose 4,6 dehydratase; structural genomics c | 96.31 | |
| 3l9w_A | 413 | Glutathione-regulated potassium-efflux system Pro | 96.26 | |
| 4hkt_A | 331 | Inositol 2-dehydrogenase; structural genomics, nys | 96.26 | |
| 2b25_A | 336 | Hypothetical protein; structural genomics, methyl | 96.26 | |
| 3vc1_A | 312 | Geranyl diphosphate 2-C-methyltransferase; rossman | 96.26 | |
| 3lt0_A | 329 | Enoyl-ACP reductase; triclosan, triclosan variant, | 96.24 | |
| 4egb_A | 346 | DTDP-glucose 4,6-dehydratase; rhamnose pathway, ce | 96.22 | |
| 3ezy_A | 344 | Dehydrogenase; structural genomics, unknown functi | 96.21 | |
| 3rc1_A | 350 | Sugar 3-ketoreductase; sugar biosynthesis, TDP bin | 96.21 | |
| 3e18_A | 359 | Oxidoreductase; dehydrogenase, NAD-binding, struct | 96.18 | |
| 2gcg_A | 330 | Glyoxylate reductase/hydroxypyruvate reductase; NA | 96.17 | |
| 4e5n_A | 330 | Thermostable phosphite dehydrogenase; D-2-hydroxya | 96.16 | |
| 1yb2_A | 275 | Hypothetical protein TA0852; structural genomics, | 96.16 | |
| 3p2o_A | 285 | Bifunctional protein fold; structural genomics, ce | 96.16 | |
| 4df3_A | 233 | Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; | 96.15 | |
| 3l4b_C | 218 | TRKA K+ channel protien TM1088B; potassium channel | 96.15 | |
| 1nkv_A | 256 | Hypothetical protein YJHP; structural genomics, PS | 96.15 | |
| 2ph5_A | 480 | Homospermidine synthase; alpha-beta protein, struc | 96.14 | |
| 3db2_A | 354 | Putative NADPH-dependent oxidoreductase; two domai | 96.14 | |
| 4f6c_A | 427 | AUSA reductase domain protein; thioester reductase | 96.14 | |
| 3e9m_A | 330 | Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, | 96.13 | |
| 4a5o_A | 286 | Bifunctional protein fold; oxidoreductase, hydrola | 96.13 | |
| 3gjy_A | 317 | Spermidine synthase; APC62791, structural genomics | 96.13 | |
| 1mjf_A | 281 | Spermidine synthase; spermidine synthetase, struct | 96.13 | |
| 1n2s_A | 299 | DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold | 96.13 | |
| 4a26_A | 300 | Putative C-1-tetrahydrofolate synthase, cytoplasm; | 96.13 | |
| 1i24_A | 404 | Sulfolipid biosynthesis protein SQD1; SDR, short-c | 96.12 | |
| 3l07_A | 285 | Bifunctional protein fold; structural genomics, ID | 96.11 | |
| 2gk4_A | 232 | Conserved hypothetical protein; alpha-beta-alpha s | 96.11 | |
| 3zen_D | 3089 | Fatty acid synthase; transferase, mycolic acid bio | 96.11 | |
| 1p9l_A | 245 | Dihydrodipicolinate reductase; oxidoreductase, lys | 96.11 | |
| 2c29_D | 337 | Dihydroflavonol 4-reductase; flavonoids, short deh | 96.11 | |
| 2d0i_A | 333 | Dehydrogenase; structural genomics, NPPSFA, nation | 96.09 | |
| 2pbf_A | 227 | Protein-L-isoaspartate O-methyltransferase beta-A | 96.08 | |
| 1orr_A | 347 | CDP-tyvelose-2-epimerase; rossmann fold, short-cha | 96.08 | |
| 4ggo_A | 401 | Trans-2-enoyl-COA reductase; rossmann fold, oxidor | 96.07 | |
| 1udb_A | 338 | Epimerase, UDP-galactose-4-epimerase; isomerase; H | 96.07 | |
| 3ngx_A | 276 | Bifunctional protein fold; methylenetetrahydrofola | 96.07 | |
| 3euw_A | 344 | MYO-inositol dehydrogenase; protein structure init | 96.06 | |
| 3dli_A | 240 | Methyltransferase; PSI-II, NYSGXRC, structural gen | 96.06 | |
| 3jtm_A | 351 | Formate dehydrogenase, mitochondrial; mitochondrio | 96.04 | |
| 3u81_A | 221 | Catechol O-methyltransferase; neurotransmitter deg | 96.04 | |
| 1r18_A | 227 | Protein-L-isoaspartate(D-aspartate)-O-methyltrans; | 96.03 | |
| 2x6t_A | 357 | ADP-L-glycero-D-manno-heptose-6-epimerase; isomera | 96.02 | |
| 1vbf_A | 231 | 231AA long hypothetical protein-L-isoaspartate O- | 96.02 | |
| 3ou2_A | 218 | SAM-dependent methyltransferase; O-methyltransfera | 96.01 | |
| 2b2c_A | 314 | Spermidine synthase; beta-alpha, transferase; 2.50 | 96.01 | |
| 3tum_A | 269 | Shikimate dehydrogenase family protein; rossmann-f | 96.0 | |
| 3gg9_A | 352 | D-3-phosphoglycerate dehydrogenase oxidoreductase; | 96.0 | |
| 2c5a_A | 379 | GDP-mannose-3', 5'-epimerase; short chain dehydrat | 95.99 | |
| 1r6d_A | 337 | TDP-glucose-4,6-dehydratase; rossmann fold, short- | 95.98 | |
| 3slk_A | 795 | Polyketide synthase extender module 2; rossmann fo | 95.97 | |
| 1nvm_B | 312 | Acetaldehyde dehydrogenase (acylating), 4-hydroxy- | 95.97 | |
| 3ggo_A | 314 | Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-b | 95.96 | |
| 4had_A | 350 | Probable oxidoreductase protein; structural genomi | 95.94 | |
| 3a06_A | 376 | 1-deoxy-D-xylulose 5-phosphate reductoisomerase; M | 95.92 | |
| 1vpd_A | 299 | Tartronate semialdehyde reductase; structural geno | 95.92 | |
| 3pef_A | 287 | 6-phosphogluconate dehydrogenase, NAD-binding; gam | 95.91 | |
| 2j6i_A | 364 | Formate dehydrogenase; oxidoreductase, D-specific- | 95.87 | |
| 1i1n_A | 226 | Protein-L-isoaspartate O-methyltransferase; S-aden | 95.86 | |
| 4hy3_A | 365 | Phosphoglycerate oxidoreductase; PSI-biology, stru | 95.86 | |
| 2p5y_A | 311 | UDP-glucose 4-epimerase; TTHA0591, structural geno | 95.84 | |
| 2nac_A | 393 | NAD-dependent formate dehydrogenase; oxidoreductas | 95.84 | |
| 4gek_A | 261 | TRNA (CMO5U34)-methyltransferase; structural genom | 95.83 | |
| 2o07_A | 304 | Spermidine synthase; structural genomics, structur | 95.83 | |
| 2w2k_A | 348 | D-mandelate dehydrogenase; 2-hydroxyacid dehydroge | 95.82 | |
| 1xj5_A | 334 | Spermidine synthase 1; structural genomics, protei | 95.81 | |
| 1dl5_A | 317 | Protein-L-isoaspartate O-methyltransferase; isoasp | 95.8 | |
| 3bwc_A | 304 | Spermidine synthase; SAM, SGPP, structura genomics | 95.79 | |
| 1gdh_A | 320 | D-glycerate dehydrogenase; oxidoreductase(CHOH (D) | 95.79 | |
| 1eq2_A | 310 | ADP-L-glycero-D-mannoheptose 6-epimerase; N-termin | 95.78 | |
| 1b0a_A | 288 | Protein (fold bifunctional protein); folate, dehyd | 95.77 | |
| 2o57_A | 297 | Putative sarcosine dimethylglycine methyltransfera | 95.76 | |
| 4fb5_A | 393 | Probable oxidoreductase protein; PSI-biology, nysg | 95.75 |
| >3qwb_A Probable quinone oxidoreductase; rossmann fold, quinone oxidoreductases, NADPH, cytoplasm and oxidoreductase; HET: NDP; 1.59A {Saccharomyces cerevisiae} PDB: 3qwa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.4e-55 Score=393.21 Aligned_cols=322 Identities=18% Similarity=0.231 Sum_probs=278.8
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCccccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGY 80 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~ 80 (342)
|+++.+|||+++.++ |.| +.+++++ .|.| +++++||+|||.++|||++|++.+.|.++ ..+|.++|||++|
T Consensus 3 ~~~p~~mka~~~~~~--g~~--~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~-~~~P~i~G~e~~G- 73 (334)
T 3qwb_A 3 CTIPEQQKVILIDEI--GGY--DVIKYED--YPVP-SISEEELLIKNKYTGVNYIESYFRKGIYP-CEKPYVLGREASG- 73 (334)
T ss_dssp --CCSEEEEEEESSS--SSG--GGEEEEE--EECC-CCCTTEEEEEEEEEECCTTHHHHHHTSSC-CCSSEECCSEEEE-
T ss_pred CCCchheEEEEEecC--CCC--ceeEEEe--ccCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCC-CCCCCccccceEE-
Confidence 345688999999998 776 5567765 4445 45999999999999999999999888654 3468999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEec--cccceeEeec-CCcceeecCCCCCccch---hhccCCchhhHHHhhhhhcCCCCCC
Q 019332 81 GVAKVLDSENPEFKKGDLVWGM--TGWEEYSLVT-APQLFKIQHTDVPLSYY---TGILGMPGMTAYAGFYEVCSPKQGE 154 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~~--g~~~~~~~v~-~~~~~~i~p~~~~~~~~---~a~l~~~~~ta~~al~~~~~~~~~~ 154 (342)
+|+++|++|++|++||||+++ |+|+||++++ .+.++++ |+++++. + +|++++.++|||+++.+.+++++|+
T Consensus 74 -~V~~vG~~v~~~~~GdrV~~~~~G~~aey~~v~~~~~~~~~-P~~~~~~-~~~~aa~~~~~~~ta~~~l~~~~~~~~g~ 150 (334)
T 3qwb_A 74 -TVVAKGKGVTNFEVGDQVAYISNSTFAQYSKISSQGPVMKL-PKGTSDE-ELKLYAAGLLQVLTALSFTNEAYHVKKGD 150 (334)
T ss_dssp -EEEEECTTCCSCCTTCEEEEECSSCSBSEEEEETTSSEEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHTTSCCCTTC
T ss_pred -EEEEECCCCCCCCCCCEEEEeeCCcceEEEEecCcceEEEC-CCCCCHH-HhhhhhhhhhHHHHHHHHHHHhccCCCCC
Confidence 999999999999999999976 8999999999 9999999 9995444 3 4678889999999998888999999
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~ 233 (342)
+|||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||+|+.
T Consensus 151 ~vlV~Ga~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~-~~~~~~~~~~~~~g~D~vid~~g~~ 228 (334)
T 3qwb_A 151 YVLLFAAAGGVGLILNQLLKMKGAHTIAVASTDEKLKIAK-EYGAEYLINASKE-DILRQVLKFTNGKGVDASFDSVGKD 228 (334)
T ss_dssp EEEESSTTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEECCGGG
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEeCCCc-hHHHHHHHHhCCCCceEEEECCChH
Confidence 9999999999999999999999999999999999999998 9999999999987 999999999987 899999999999
Q ss_pred hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc---ccchHHHHHHHHHHHHcCCceeee
Q 019332 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVYVE 310 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~ 310 (342)
.+..++++++++|+++.+|...+. ........++.+++++.++.+..+ +....+.++++++++.+|++++.+
T Consensus 229 ~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i 303 (334)
T 3qwb_A 229 TFEISLAALKRKGVFVSFGNASGL-----IPPFSITRLSPKNITLVRPQLYGYIADPEEWKYYSDEFFGLVNSKKLNIKI 303 (334)
T ss_dssp GHHHHHHHEEEEEEEEECCCTTCC-----CCCBCGGGGTTTTCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSSCCCE
T ss_pred HHHHHHHHhccCCEEEEEcCCCCC-----CCCcchhhhhhCceEEEEEEeccccCCHHHHHHHHHHHHHHHHCCCccCce
Confidence 999999999999999999976542 223445566788999887765544 233445678999999999999999
Q ss_pred eeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 311 DMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 311 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
..+|+++++++|++.+.+++..||+|+++++
T Consensus 304 ~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~q 334 (334)
T 3qwb_A 304 YKTYPLRDYRTAAADIESRKTVGKLVLEIPQ 334 (334)
T ss_dssp EEEEEGGGHHHHHHHHHTTCCCBEEEEECCC
T ss_pred eeEEcHHHHHHHHHHHHhCCCceEEEEecCC
Confidence 8999999999999999999999999999864
|
| >4dup_A Quinone oxidoreductase; PSI-biology, structural genomics, protein structure initiati structural genomics research consortium, nysgrc; 2.45A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.7e-55 Score=396.70 Aligned_cols=322 Identities=21% Similarity=0.305 Sum_probs=280.4
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISG 79 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G 79 (342)
|+++.+|||+++.++ |.| +++++++ .|.| .++++||+|||.++|||++|++.+.|.++. ..+|.++|||++|
T Consensus 23 ~~~p~~MkA~~~~~~--g~~--~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G 95 (353)
T 4dup_A 23 MSLPQEMRFVDLKSF--GGP--DVMVIGK--RPLP-VAGEGEVLVRAEAIGVNRPDIAQRQGSYPPPKDASPILGLELSG 95 (353)
T ss_dssp CCCCSSEEEEEESSS--SSG--GGEEEEE--ECCC-CCCTTEEEEEEEEEEECHHHHHHHTTSSCCCTTSCSSSCCEEEE
T ss_pred CCCChheeEEEEccC--CCc--cceEEEe--ccCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCccccccEE
Confidence 778889999999999 877 5666765 4555 458999999999999999999999887642 3468999999776
Q ss_pred cEEEEEecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEE
Q 019332 80 YGVAKVLDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECV 156 (342)
Q Consensus 80 ~g~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~v 156 (342)
+|+++|++|++|++||+|+++ |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|
T Consensus 96 --~V~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~V 171 (353)
T 4dup_A 96 --EIVGVGPGVSGYAVGDKVCGLANGGAYAEYCLLPAGQILPF-PKGYDAV-KAAALPETFFTVWANLFQMAGLTEGESV 171 (353)
T ss_dssp --EEEEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEEC-CTTCCHH-HHHTSHHHHHHHHHHHTTTTCCCTTCEE
T ss_pred --EEEEECCCCCCCCCCCEEEEecCCCceeeEEEEcHHHcEeC-CCCCCHH-HHhhhhhHHHHHHHHHHHhcCCCCCCEE
Confidence 999999999999999999987 89999999999999999 9994443 3778999999999999888999999999
Q ss_pred EEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHH
Q 019332 157 FISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLD 236 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~ 236 (342)
||+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++++++. ++.+.+++.+++++|++|||+|++.+.
T Consensus 172 lV~Gg~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~-~~~~~~~~~~~~g~Dvvid~~g~~~~~ 249 (353)
T 4dup_A 172 LIHGGTSGIGTTAIQLARAFGAEVYATAGSTGKCEACE-RLGAKRGINYRSE-DFAAVIKAETGQGVDIILDMIGAAYFE 249 (353)
T ss_dssp EESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHSSCEEEEEESCCGGGHH
T ss_pred EEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEeCCch-HHHHHHHHHhCCCceEEEECCCHHHHH
Confidence 99999999999999999999999999999999999999 9999999999988 899999998844899999999999999
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc-----chHHHHHHHHHHHHcCCceeeee
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH-----LYPKFLEMIIPHIKEGKIVYVED 311 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~g~~~~~~~ 311 (342)
.++++++++|+++.+|...+.. ....+...++.+++++.++....... ...+.++++++++.+|.+++.+.
T Consensus 250 ~~~~~l~~~G~iv~~g~~~~~~----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~ 325 (353)
T 4dup_A 250 RNIASLAKDGCLSIIAFLGGAV----AEKVNLSPIMVKRLTVTGSTMRPRTAEEKRAIRDDLLSEVWPLLEAGTVAPVIH 325 (353)
T ss_dssp HHHHTEEEEEEEEECCCTTCSE----EEEEECHHHHHTTCEEEECCSTTSCHHHHHHHHHHHHHHTHHHHHHTSSCCCEE
T ss_pred HHHHHhccCCEEEEEEecCCCc----ccCCCHHHHHhcCceEEEEeccccchhhhHHHHHHHHHHHHHHHHCCCccCCcc
Confidence 9999999999999999765421 11145667788999999987655421 22334788999999999999999
Q ss_pred eeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 312 MAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 312 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+|+++++++|++.+.+++..||+|+++
T Consensus 326 ~~~~l~~~~~A~~~l~~~~~~gKvvl~~ 353 (353)
T 4dup_A 326 KVFAFEDVADAHRLLEEGSHVGKVMLTV 353 (353)
T ss_dssp EEEEGGGHHHHHHHHHHTCCSSEEEEEC
T ss_pred eEEeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 9999999999999999999999999975
|
| >4eye_A Probable oxidoreductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-54 Score=388.01 Aligned_cols=316 Identities=18% Similarity=0.211 Sum_probs=269.8
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYG 81 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g 81 (342)
+|.+|||+++.++ |.| +++++++. |.| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++|
T Consensus 18 ~p~~MkA~~~~~~--g~~--~~l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G-- 88 (342)
T 4eye_A 18 GPGSMKAIQAQSL--SGP--EGLVYTDV--ETP-GAGPNVVVVDVKAAGVCFPDYLMTKGEYQLKMEPPFVPGIETAG-- 88 (342)
T ss_dssp CCCEEEEEEECSS--SGG--GGEEEEEE--ECC-CCCTTCEEEEEEEEECCHHHHHHHTTCSSSCCCSSBCCCSEEEE--
T ss_pred CCcceEEEEEecC--CCC--ceeEEEeC--CCC-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCCccceeEEE--
Confidence 3578999999998 877 45677654 445 46899999999999999999999998763 34678999999776
Q ss_pred EEEEecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEE
Q 019332 82 VAKVLDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
+|+++|++++ |++||||+++ |+|+||+.++.+.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||
T Consensus 89 ~V~~vG~~v~-~~vGDrV~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV 165 (342)
T 4eye_A 89 VVRSAPEGSG-IKPGDRVMAFNFIGGYAERVAVAPSNILPT-PPQLDDA-EAVALIANYHTMYFAYARRGQLRAGETVLV 165 (342)
T ss_dssp EEEECCTTSS-CCTTCEEEEECSSCCSBSEEEECGGGEEEC-CTTSCHH-HHHHHTTHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred EEEEECCCCC-CCCCCEEEEecCCCcceEEEEEcHHHeEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhcCCCCCCEEEE
Confidence 9999999999 9999999987 79999999999999999 9994443 277999999999999988899999999999
Q ss_pred ecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHH
Q 019332 159 SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDA 237 (342)
Q Consensus 159 ~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~ 237 (342)
+|++|++|++++|+|+..|++|+++++++++++.++ ++|++.+++++ . ++.+.+++.+++ ++|++|||+|++.+..
T Consensus 166 ~Gasg~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~v~~~~-~-~~~~~v~~~~~~~g~Dvvid~~g~~~~~~ 242 (342)
T 4eye_A 166 LGAAGGIGTAAIQIAKGMGAKVIAVVNRTAATEFVK-SVGADIVLPLE-E-GWAKAVREATGGAGVDMVVDPIGGPAFDD 242 (342)
T ss_dssp SSTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEESS-T-THHHHHHHHTTTSCEEEEEESCC--CHHH
T ss_pred ECCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEecCc-h-hHHHHHHHHhCCCCceEEEECCchhHHHH
Confidence 999999999999999999999999999999999999 89999999998 5 899999999988 9999999999999999
Q ss_pred HHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc----ccchHHHHHHHHHHHHcCCceeeeeee
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY----YHLYPKFLEMIIPHIKEGKIVYVEDMA 313 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~ 313 (342)
++++++++|+++.+|...+. ........++.+++++.++....+ ++...+.++++++++.+| +++.+..+
T Consensus 243 ~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~l~~~g-l~~~i~~~ 316 (342)
T 4eye_A 243 AVRTLASEGRLLVVGFAAGG-----IPTIKVNRLLLRNASLIGVAWGEFLRTHADYLYETQAGLEKLVAEG-MRPPVSAR 316 (342)
T ss_dssp HHHTEEEEEEEEEC---------------CCCCGGGTTCEEEECCHHHHHHHCTTHHHHHHHHHHHHHHTT-CCCCEEEE
T ss_pred HHHhhcCCCEEEEEEccCCC-----CCccCHHHHhhcCCEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcC-CCCCcceE
Confidence 99999999999999976542 112233446778999988876443 334457789999999999 99999999
Q ss_pred eccccHHHHHHHHHcCCccceEEEEe
Q 019332 314 EGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 314 ~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
|+++++++|++.+.+++..||+||++
T Consensus 317 ~~l~~~~~A~~~~~~~~~~gKvvl~P 342 (342)
T 4eye_A 317 IPLSEGRQALQDFADGKVYGKMVLVP 342 (342)
T ss_dssp EEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred EeHHHHHHHHHHHHhCCCCceEEEeC
Confidence 99999999999999999999999874
|
| >3uog_A Alcohol dehydrogenase; structural genomics, protein structure initiative, PSI-biolo YORK structural genomics research consortium; 2.20A {Sinorhizobium meliloti 1021} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.1e-54 Score=389.06 Aligned_cols=310 Identities=23% Similarity=0.288 Sum_probs=272.7
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGV 82 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~ 82 (342)
+.+|||+++.++ ++ +.+++++.+. | +++++||||||.++|||++|++.+.|.++ ...+|.++|||++| +
T Consensus 25 ~~~mkA~~~~~~--~~---~~l~~~e~p~--P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~GhE~~G--~ 94 (363)
T 3uog_A 25 SKWMQEWSTETV--AP---HDLKLAERPV--P-EAGEHDIIVRTLAVSLNYRDKLVLETGMGLDLAFPFVPASDMSG--V 94 (363)
T ss_dssp CSEEEEEEBSCT--TT---TCCEEEEEEC--C-CCCTTEEEEEEEEEECCHHHHHHHHHCTTCCCCSSBCCCCEEEE--E
T ss_pred chhhEEEEEccC--CC---CCcEEEeeeC--C-CCCCCEEEEEEEEEecCHHHHHHhcCCCCCCCCCCcCcccceEE--E
Confidence 457999999987 42 3467776555 4 56899999999999999999999988764 35679999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec---------------------------cccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 83 AKVLDSENPEFKKGDLVWGM---------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~---------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|+++|++|++|++||||++. |+|+||++++++.++++ |+++++. ++|++++
T Consensus 95 V~~vG~~v~~~~vGDrV~~~~~~~c~~g~~~c~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~ 172 (363)
T 3uog_A 95 VEAVGKSVTRFRPGDRVISTFAPGWLDGLRPGTGRTPAYETLGGAHPGVLSEYVVLPEGWFVAA-PKSLDAA-EASTLPC 172 (363)
T ss_dssp EEEECTTCCSCCTTCEEEECSSTTCCSSSCCSCSSCCCCCCTTTTSCCCCBSEEEEEGGGEEEC-CTTSCHH-HHHTTTT
T ss_pred EEEECCCCCCCCCCCEEEEeccccccccccccccccccccccCcCCCCcceeEEEechHHeEEC-CCCCCHH-HHhhccc
Confidence 99999999999999999975 88999999999999999 9994444 3888999
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+++|||+++.+.+++++|++|||+| +|++|++++|+|+..|++|++++++++++++++ ++|++.++|+... ++.+.+
T Consensus 173 ~~~ta~~al~~~~~~~~g~~VlV~G-~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v 249 (363)
T 3uog_A 173 AGLTAWFALVEKGHLRAGDRVVVQG-TGGVALFGLQIAKATGAEVIVTSSSREKLDRAF-ALGADHGINRLEE-DWVERV 249 (363)
T ss_dssp HHHHHHHHHTTTTCCCTTCEEEEES-SBHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHH
T ss_pred HHHHHHHHHHHhcCCCCCCEEEEEC-CCHHHHHHHHHHHHcCCEEEEEecCchhHHHHH-HcCCCEEEcCCcc-cHHHHH
Confidence 9999999998889999999999999 699999999999999999999999999999998 9999999996656 899999
Q ss_pred HHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 216 KRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
++.+++ ++|++|||+|+..+..++++++++|+++.+|...+. ....+...++.+++++.++.... .+.+
T Consensus 250 ~~~~~g~g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~ 319 (363)
T 3uog_A 250 YALTGDRGADHILEIAGGAGLGQSLKAVAPDGRISVIGVLEGF-----EVSGPVGPLLLKSPVVQGISVGH-----RRAL 319 (363)
T ss_dssp HHHHTTCCEEEEEEETTSSCHHHHHHHEEEEEEEEEECCCSSC-----EECCBTTHHHHTCCEEEECCCCC-----HHHH
T ss_pred HHHhCCCCceEEEECCChHHHHHHHHHhhcCCEEEEEecCCCc-----ccCcCHHHHHhCCcEEEEEecCC-----HHHH
Confidence 999988 999999999999999999999999999999986542 12344566788999999887655 6789
Q ss_pred HHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++++++.+|.+++.+..+|+|+++++|++.+.+++ .||+||++
T Consensus 320 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~-~gKvvi~~ 363 (363)
T 3uog_A 320 EDLVGAVDRLGLKPVIDMRYKFTEVPEALAHLDRGP-FGKVVIEF 363 (363)
T ss_dssp HHHHHHHHHHTCCCCEEEEEEGGGHHHHHHTGGGCC-SBEEEEEC
T ss_pred HHHHHHHHcCCCccceeeEEcHHHHHHHHHHHHcCC-CccEEEeC
Confidence 999999999999999999999999999999999998 89999975
|
| >3jyn_A Quinone oxidoreductase; rossmann fold, protein-NADPH complex; HET: NDP; 2.01A {Pseudomonas syringae PV} PDB: 3jyl_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=6.8e-54 Score=382.23 Aligned_cols=315 Identities=21% Similarity=0.247 Sum_probs=273.2
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ |+| +++++++. |.| +++++||+|||.++|||++|++.+.|.++...+|.++|||++| +|+++
T Consensus 2 MkA~~~~~~--g~~--~~l~~~~~--~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~e~~G--~V~~v 72 (325)
T 3jyn_A 2 AKRIQFSTV--GGP--EVLEYVDF--EPE-APGPQAVVVRNKAIGLNFIDTYYRSGLYPAPFLPSGLGAEGAG--VVEAV 72 (325)
T ss_dssp EEEEEBSSC--SSG--GGCEEEEE--CCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCCCEEE--EEEEE
T ss_pred cEEEEEecC--CCc--ceeEEeec--CCC-CCCCCEEEEEEEEEecCHHHHHHHCCCCCCCCCCCCCCceeEE--EEEEE
Confidence 699999999 887 56777664 445 5589999999999999999999999877655679999999776 99999
Q ss_pred cCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 87 DSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
|+++++|++||+|++. |+|+||+.++++.++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+||+
T Consensus 73 G~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga~ 150 (325)
T 3jyn_A 73 GDEVTRFKVGDRVAYGTGPLGAYSEVHVLPEANLVKL-ADSVSFE-QAAALMLKGLTVQYLLRQTYQVKPGEIILFHAAA 150 (325)
T ss_dssp CTTCCSCCTTCEEEESSSSSCCSBSEEEEEGGGEEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred CCCCCCCCCCCEEEEecCCCccccceEEecHHHeEEC-CCCCCHH-HHhhhhhhHHHHHHHHHHhcCCCCCCEEEEEcCC
Confidence 9999999999999975 79999999999999999 9994444 3778888999999999888899999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||+|++.+..++++
T Consensus 151 g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~~~ 228 (325)
T 3jyn_A 151 GGVGSLACQWAKALGAKLIGTVSSPEKAAHAK-ALGAWETIDYSHE-DVAKRVLELTDGKKCPVVYDGVGQDTWLTSLDS 228 (325)
T ss_dssp SHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEESSCGGGHHHHHTT
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-cHHHHHHHHhCCCCceEEEECCChHHHHHHHHH
Confidence 99999999999999999999999999999999 9999999999987 999999999987 89999999999999999999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhc-ceeeecceeccc---ccchHHHHHHHHHHHHcCCceeeeeeeeccc
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTK-RVRMEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE 317 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~ 317 (342)
++++|+++.+|...+. ....+...+..+ ++.+.+..+..+ ++...+.++++++++.+|++++.+..+|+++
T Consensus 229 l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~ 303 (325)
T 3jyn_A 229 VAPRGLVVSFGNASGP-----VSGVNLGILAQKDSVYVTRPTLGSYANNAQNLQTMADELFDMLASGKLKVDGIEQYALK 303 (325)
T ss_dssp EEEEEEEEECCCTTCC-----CCSCCTHHHHHTTSCEEECCCHHHHSCSTTHHHHHHHHHHHHHHTTSSCCCCCEEEEGG
T ss_pred hcCCCEEEEEecCCCC-----CCCCCHHHHhhcCcEEEEeeeeeeecCCHHHHHHHHHHHHHHHHCCCeeCccccEEcHH
Confidence 9999999999976542 112344445555 566655443332 3445567789999999999999988899999
Q ss_pred cHHHHHHHHHcCCccceEEEEe
Q 019332 318 SAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 318 ~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++++|++.+.+++..||+|+.+
T Consensus 304 ~~~~A~~~~~~~~~~Gkvvl~p 325 (325)
T 3jyn_A 304 DAAKAQIELSARRTTGSTILIP 325 (325)
T ss_dssp GHHHHHHHHHTTCCCSCEEEEC
T ss_pred HHHHHHHHHHcCCCCceEEEeC
Confidence 9999999999999999999864
|
| >3gms_A Putative NADPH:quinone reductase; structural genomics, putative quinone oxidoreductase, unknown function, PSI-2; 1.76A {Bacillus thuringiensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.6e-54 Score=383.91 Aligned_cols=318 Identities=16% Similarity=0.247 Sum_probs=268.4
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v 83 (342)
++|||+++.++ |.|. +.+++++. |.| +++++||+|||.++|||++|++.+.|.++ ...+|.++|||++| +|
T Consensus 3 ~~mka~~~~~~--g~p~-~~l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G--~V 74 (340)
T 3gms_A 3 LHGKLIQFHKF--GNPK-DVLQVEYK--NIE-PLKDNEVFVRMLVRPINPSDLIPITGAYAHRIPLPNIPGYEGVG--IV 74 (340)
T ss_dssp CEEEEEEESSC--SCHH-HHEEEEEE--ECC-CCCTTEEEEEEEEEECCHHHHGGGGTTTTTTSCSSBCCCSCCEE--EE
T ss_pred cccEEEEEecC--CCch-heEEEEec--CCC-CCCCCEEEEEEEEecCCHHHHHHhcCCCCCCCCCCCcCCcceEE--EE
Confidence 58999999999 8763 34666664 445 45899999999999999999999998764 34678999999777 99
Q ss_pred EEecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 84 KVLDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
+++|++|++|++||+|+++ |+|+||++++.+.++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+|
T Consensus 75 ~~vG~~v~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~v-P~~l~~~-~aa~l~~~~~ta~~~~~~~~~~~~g~~VlV~G 152 (340)
T 3gms_A 75 ENVGAFVSRELIGKRVLPLRGEGTWQEYVKTSADFVVPI-PDSIDDF-TAAQMYINPLTAWVTCTETLNLQRNDVLLVNA 152 (340)
T ss_dssp EEECTTSCGGGTTCEEEECSSSCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTSSHHHHHHHHHHHTTSCCCTTCEEEESS
T ss_pred EEeCCCCCCCCCCCEEEecCCCccceeEEEcCHHHeEEC-CCCCCHH-HHhhhcchHHHHHHHHHHhcccCCCCEEEEeC
Confidence 9999999999999999987 89999999999999999 9994443 37888999999999998889999999999999
Q ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHH
Q 019332 161 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 161 a~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~ 239 (342)
++|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||+|+......+
T Consensus 153 a~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lga~~~~~~~~~-~~~~~~~~~~~~~g~Dvvid~~g~~~~~~~~ 230 (340)
T 3gms_A 153 CGSAIGHLFAQLSQILNFRLIAVTRNNKHTEELL-RLGAAYVIDTSTA-PLYETVMELTNGIGADAAIDSIGGPDGNELA 230 (340)
T ss_dssp TTSHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCHHHHHHHH
T ss_pred CccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hCCCcEEEeCCcc-cHHHHHHHHhCCCCCcEEEECCCChhHHHHH
Confidence 9889999999999999999999999999999999 8999999999987 899999999988 999999999997777888
Q ss_pred HhhhhCCEEEEEceeccccCCCCccccchHHHH-hcceeeecceeccc-----ccchHHHHHHHHHHHHcCCcee-eeee
Q 019332 240 LNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLV-TKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVY-VEDM 312 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~-~~~~ 312 (342)
++|+++|+++.+|...+.. .....+. ..++.+..+.+..+ .....+.++++++++.+|++++ .+..
T Consensus 231 ~~l~~~G~iv~~G~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~i~~ 303 (340)
T 3gms_A 231 FSLRPNGHFLTIGLLSGIQ-------VNWAEIVTKAKVHANIFHLRHWNDEVSPYKWQETFRHLIRLVENEQLRFMKVHS 303 (340)
T ss_dssp HTEEEEEEEEECCCTTSCC-------CCHHHHHHTSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSSCCCCEEE
T ss_pred HHhcCCCEEEEEeecCCCC-------CCHHHhhhcccceEEEEEehhhhhhcCHHHHHHHHHHHHHHHHcCCCccccccE
Confidence 9999999999999865431 1222222 23444444433222 2234578899999999999997 4778
Q ss_pred eeccccHHHHHHHHHcCCc-cceEEEEecC
Q 019332 313 AEGLESAPATLIGLFSGRN-VGKQVVAVAP 341 (342)
Q Consensus 313 ~~~l~~~~~a~~~~~~~~~-~gkvvv~~~~ 341 (342)
+|+++++++|++.+.+++. .||+++++.+
T Consensus 304 ~~~l~~~~~A~~~~~~~~~~~GKvvl~~~~ 333 (340)
T 3gms_A 304 TYELADVKAAVDVVQSAEKTKGKVFLTSYE 333 (340)
T ss_dssp EEEGGGHHHHHHHHHCTTCCSSEEEEECC-
T ss_pred EEeHHHHHHHHHHHHhcCCCCCeEEEEEec
Confidence 8999999999999999985 4999999865
|
| >4b7c_A Probable oxidoreductase; NADP cofactor, rossmann fold; HET: MES; 2.10A {Pseudomonas aeruginosa PA01} PDB: 4b7x_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-53 Score=377.11 Aligned_cols=325 Identities=42% Similarity=0.682 Sum_probs=277.4
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccc--cEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISG--YGV 82 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G--~g~ 82 (342)
++||||++.++..|.|.++.+++++.+.| .++++||||||.+++||++|+..+.+. ....+|.++|||+.| +|+
T Consensus 6 ~~mka~v~~~~~~g~~~~~~l~~~~~~~P---~~~~~eVlVkv~a~gi~~~d~~~~~~~-~~~~~p~~~G~e~g~~~~G~ 81 (336)
T 4b7c_A 6 QINRQYQLAQRPSGLPGRDTFSFVETPLG---EPAEGQILVKNEYLSLDPAMRGWMNDA-RSYIPPVGIGEVMRALGVGK 81 (336)
T ss_dssp CEEEEEEECSCCSSSCCTTSEEEEEEECC---CCCTTCEEEEEEEEECCTHHHHHHSCS-CCSSCCCCTTSBCCCEEEEE
T ss_pred ccccEEEEEecCCCCCCCCceEEEeccCC---CCCCCEEEEEEEEEEeCHHHHhhhhcc-cccCCCCCCCcccCCceEEE
Confidence 57899999986557777788888776555 458999999999999999998777653 234568889998654 346
Q ss_pred EEEecCCCCCCCCCCEEEeccccceeEeecCCcceeecCCCCCccchh--hccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 83 AKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPLSYYT--GILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~~~~~--a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
|++ +++++|++||||++.|+|+||++++++.++++ |++++.. ++ |+++++++|||++|.+.+++++|++|||+|
T Consensus 82 V~~--~~v~~~~vGdrV~~~G~~aey~~v~~~~~~~~-P~~~~~~-~~a~a~l~~~~~tA~~al~~~~~~~~g~~vlI~G 157 (336)
T 4b7c_A 82 VLV--SKHPGFQAGDYVNGALGVQDYFIGEPKGFYKV-DPSRAPL-PRYLSALGMTGMTAYFALLDVGQPKNGETVVISG 157 (336)
T ss_dssp EEE--ECSTTCCTTCEEEEECCSBSEEEECCTTCEEE-CTTTSCG-GGGGTTTSHHHHHHHHHHHHTTCCCTTCEEEESS
T ss_pred EEe--cCCCCCCCCCEEeccCCceEEEEechHHeEEc-CCCCCch-HHHhhhcccHHHHHHHHHHHhcCCCCCCEEEEEC
Confidence 666 56899999999999999999999999999999 9984322 23 789999999999998889999999999999
Q ss_pred CCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHH-HHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHH
Q 019332 161 ASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLL-KNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 161 a~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~-~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~ 239 (342)
++|++|++++|+++..|++|+++++++++.+.+ + ++|++.++|+++. ++.+.+++.+++++|++|||+|++.+..++
T Consensus 158 a~g~iG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~ 235 (336)
T 4b7c_A 158 AAGAVGSVAGQIARLKGCRVVGIAGGAEKCRFLVE-ELGFDGAIDYKNE-DLAAGLKRECPKGIDVFFDNVGGEILDTVL 235 (336)
T ss_dssp TTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHH-TTCCSEEEETTTS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHhcCCCceEEEECCCcchHHHHH
Confidence 999999999999999999999999999999999 6 9999999999987 899999999866899999999999999999
Q ss_pred HhhhhCCEEEEEceeccccCC-CCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeecccc
Q 019332 240 LNMKIHGRIAVCGMISQYNLD-RPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLES 318 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~ 318 (342)
++++++|+++.+|...+.... ......+...++.+++++.++....+.....+.++++++++.+|.+++.+..+|+|++
T Consensus 236 ~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l~~ 315 (336)
T 4b7c_A 236 TRIAFKARIVLCGAISQYNNKEAVRGPANYLSLLVNRARMEGMVVMDYAQRFPEGLKEMATWLAEGKLQSREDIVEGLET 315 (336)
T ss_dssp TTEEEEEEEEECCCGGGGC------CCTTTTHHHHTTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEECGGG
T ss_pred HHHhhCCEEEEEeecccccCCcccccchhHHHHHhCCcEEEEEEhhhhhhhhHHHHHHHHHHHHCCCcccceeeecCHHH
Confidence 999999999999986632110 0112344566788999999988776555566889999999999999999988899999
Q ss_pred HHHHHHHHHcCCccceEEEEe
Q 019332 319 APATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 319 ~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++|++.+.+++..||+||++
T Consensus 316 ~~~A~~~~~~~~~~gKvvi~~ 336 (336)
T 4b7c_A 316 FPETLLKLFSGENFGKLVLKV 336 (336)
T ss_dssp HHHHHHHHHTTCCCSEEEEEC
T ss_pred HHHHHHHHHcCCCCceEEEeC
Confidence 999999999999999999975
|
| >3fbg_A Putative arginate lyase; structural genomics, unknown function, PSI-2, protein structure initiative; 1.60A {Staphylococcus haemolyticus} | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-53 Score=379.67 Aligned_cols=315 Identities=20% Similarity=0.209 Sum_probs=265.6
Q ss_pred ccccEEEEecccCCCC-CCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFP-KETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p-~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|+|||++++++ |.+ .++.+++++. |.| .++++||+|||.+++||++|++.+.|. ...+|.++|||++| +|
T Consensus 1 m~MkA~~~~~~--G~~~~~~~l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~--~~~~p~i~G~e~~G--~V 71 (346)
T 3fbg_A 1 MSLKAIGFEQP--FKLSDGNLFKTFNL--DIP-EPKVHEILVKIQSISVNPVDTKQRLMD--VSKAPRVLGFDAIG--VV 71 (346)
T ss_dssp -CEEEEEBSSC--CCGGGCCCCEEEEE--CCC-CCCTTEEEEEEEEEEECHHHHHHTTSC--CSSSCBCCCCCEEE--EE
T ss_pred CCcEEEEEEec--cccCCCceeEeccc--cCC-CCCCCEEEEEEEEEEcCHHHHHHHhCC--CCCCCcCcCCccEE--EE
Confidence 46799999998 721 1256777664 445 458999999999999999999988875 35678999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCC------
Q 019332 84 KVLDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPK------ 151 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~------ 151 (342)
+++|++|++|++||+|+++ |+|+||++++++.++++ |+++++. ++|+++++++|||++|.+.++++
T Consensus 72 ~~vG~~v~~~~~GdrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~~~~ 149 (346)
T 3fbg_A 72 ESVGNEVTMFNQGDIVYYSGSPDQNGSNAEYQLINERLVAKA-PKNISAE-QAVSLPLTGITAYETLFDVFGISRNRNEN 149 (346)
T ss_dssp EEECTTCCSCCTTCEEEECCCTTSCCSSBSEEEEEGGGEEEC-CSSSCHH-HHTTSHHHHHHHHHHHHTTSCCCSSHHHH
T ss_pred EEeCCCCCcCCCCCEEEEcCCCCCCcceeEEEEEChHHeEEC-CCCCCHH-HhhhcchhHHHHHHHHHHhcCCccccccC
Confidence 9999999999999999985 79999999999999999 9995444 37888999999999998888998
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|++|||+||+|++|++++|+|+..|++|++++++++++++++ ++|++.++++++ ++.+.+++..++++|++|||+|
T Consensus 150 ~g~~VlV~gg~G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~--~~~~~~~~~~~~g~Dvv~d~~g 226 (346)
T 3fbg_A 150 EGKTLLIINGAGGVGSIATQIAKAYGLRVITTASRNETIEWTK-KMGADIVLNHKE--SLLNQFKTQGIELVDYVFCTFN 226 (346)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEECCSHHHHHHHH-HHTCSEEECTTS--CHHHHHHHHTCCCEEEEEESSC
T ss_pred CCCEEEEEcCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCcEEEECCc--cHHHHHHHhCCCCccEEEECCC
Confidence 9999999998999999999999999999999999999999999 899999999975 6888888884448999999999
Q ss_pred h-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-------ccchHHHHHHHHHHHHc
Q 019332 232 G-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-------YHLYPKFLEMIIPHIKE 303 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~ 303 (342)
+ ..+..++++|+++|+++.++... .......+..+++++.+...... .....+.++++++++.+
T Consensus 227 ~~~~~~~~~~~l~~~G~iv~~~~~~--------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~ 298 (346)
T 3fbg_A 227 TDMYYDDMIQLVKPRGHIATIVAFE--------NDQDLNALKPKSLSFSHEFMFARPLNQTDDMIKHHEYLEDITNKVEQ 298 (346)
T ss_dssp HHHHHHHHHHHEEEEEEEEESSCCS--------SCBCGGGGTTTTCEEEECCTTHHHHTTCTTTHHHHHHHHHHHHHHHT
T ss_pred chHHHHHHHHHhccCCEEEEECCCC--------CCCccccccccceEEEEEEEecccccchhhHHHHHHHHHHHHHHHHC
Confidence 9 56799999999999999887422 12344456678888877544321 22335778999999999
Q ss_pred CCceeeeeeee---ccccHHHHHHHHHcCCccceEEEEecC
Q 019332 304 GKIVYVEDMAE---GLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 304 g~~~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
|.+++.+..++ +++++++|++.+.+++..||+|+++++
T Consensus 299 g~l~~~i~~~~~~~~l~~~~~A~~~~~~g~~~GKvvl~~~~ 339 (346)
T 3fbg_A 299 NIYQPTTTKVIEGLTTENIYQAHQILESNTMIGKLVINLNE 339 (346)
T ss_dssp TSSCCCEEEEEESCCHHHHHHHHHHHHTTCCCSEEEEEC--
T ss_pred CCEECCccceecCCCHHHHHHHHHHHhcCCcceEEEEecCC
Confidence 99999888777 899999999999999999999999875
|
| >3gqv_A Enoyl reductase; medium-chain reductase (MDR superfamily), rossmann fold, NAD binding, oxidoreductase; HET: NAP; 1.74A {Aspergillus terreus} PDB: 3b6z_A* 3b70_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5e-52 Score=376.32 Aligned_cols=321 Identities=13% Similarity=0.143 Sum_probs=261.3
Q ss_pred CCccccccEEEEecccCCCCCCCceEEE-EeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMT-ESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISG 79 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~-~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G 79 (342)
|+++.+|||+++.++ + +++++ + +|.| .++++||+|||.+++||++|++.+.+. ..+|.++|||++|
T Consensus 6 m~~p~~mkA~v~~~~--~-----~l~~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~---~~~p~v~G~e~~G 72 (371)
T 3gqv_A 6 FIPPPQQTALTVNDH--D-----EVTVWNA--APCP-MLPRDQVYVRVEAVAINPSDTSMRGQF---ATPWAFLGTDYAG 72 (371)
T ss_dssp CCCCSCEEEEEECTT--S-----CEEEEEE--ECCC-CCCTTSEEEEEEEEECCGGGGC--------CCTTSCCCSEEEE
T ss_pred CCCchhceeEEEcCC--C-----ceEEecc--CCCC-CCCCCEEEEEEEEEEcCHHHHHHhhcC---CCCCccCccccEE
Confidence 778889999999977 3 35676 5 4555 458999999999999999999988763 3468999999776
Q ss_pred cEEEEEecCCCCCCCCCCEEEec-----------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh-
Q 019332 80 YGVAKVLDSENPEFKKGDLVWGM-----------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV- 147 (342)
Q Consensus 80 ~g~v~~vG~~v~~~~vGd~V~~~-----------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~- 147 (342)
+|+++|++|++|++||||++. |+|+||++++.+.++++ |++++.. ++|.+++++.|||++|.+.
T Consensus 73 --~V~~vG~~v~~~~~GdrV~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~ 148 (371)
T 3gqv_A 73 --TVVAVGSDVTHIQVGDRVYGAQNEMCPRTPDQGAFSQYTVTRGRVWAKI-PKGLSFE-QAAALPAGISTAGLAMKLLG 148 (371)
T ss_dssp --EEEEECTTCCSCCTTCEEEEECCTTCTTCTTCCSSBSEEECCTTCEEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHHT
T ss_pred --EEEEeCCCCCCCCCCCEEEEeccCCCCCCCCCCcCcCeEEEchhheEEC-CCCCCHH-HHhhhhhhHHHHHHHHHhhc
Confidence 999999999999999999975 79999999999999999 9994444 2778888899999999776
Q ss_pred cCC-----------CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHH
Q 019332 148 CSP-----------KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALK 216 (342)
Q Consensus 148 ~~~-----------~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~ 216 (342)
.++ ++|++|||+|++|++|++++|+|+..|++|++++ +++|+++++ ++|+++++|+++. ++.+.++
T Consensus 149 ~~~~~~~~~~~~~~~~g~~VlV~Ga~G~vG~~a~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~vi~~~~~-~~~~~v~ 225 (371)
T 3gqv_A 149 LPLPSPSADQPPTHSKPVYVLVYGGSTATATVTMQMLRLSGYIPIATC-SPHNFDLAK-SRGAEEVFDYRAP-NLAQTIR 225 (371)
T ss_dssp CCCCCSSCSSCCCCSSCCEEEEESTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTST-THHHHHH
T ss_pred cCCCCCccccccccCCCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEe-CHHHHHHHH-HcCCcEEEECCCc-hHHHHHH
Confidence 453 8999999999999999999999999999999998 788999998 9999999999998 9999999
Q ss_pred HHCCCCccEEEeCCCh-hhHHHHHHhh-hhCCEEEEEceeccccCCC---CccccchHHHHhcceeeecceeccc----c
Q 019332 217 RYFPEGIDIYFENVGG-KMLDAVLLNM-KIHGRIAVCGMISQYNLDR---PEGVHNLMYLVTKRVRMEGFLVRDY----Y 287 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~-~~~~~~~~~l-~~~G~~v~~g~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~~~~----~ 287 (342)
+.+++++|++|||+|+ ..+..++++| +++|+++.+|......... .........++.+++++.++..... .
T Consensus 226 ~~t~g~~d~v~d~~g~~~~~~~~~~~l~~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~k~~~~~g~~~~~~~~~~~ 305 (371)
T 3gqv_A 226 TYTKNNLRYALDCITNVESTTFCFAAIGRAGGHYVSLNPFPEHAATRKMVTTDWTLGPTIFGEGSTWPAPYGRPGSEEER 305 (371)
T ss_dssp HHTTTCCCEEEESSCSHHHHHHHHHHSCTTCEEEEESSCCCC---CCSCEEEEECCGGGGGTSCBSCSTTTCBCCCHHHH
T ss_pred HHccCCccEEEECCCchHHHHHHHHHhhcCCCEEEEEecCccccccccccceeeeeeeeeccccccccccccccccHHHH
Confidence 9998889999999999 7889999999 5899999999654321100 1111223457778899888754322 1
Q ss_pred cchHHHHHHHHHHHHcCCceeeeeee--eccccHHHHHHHHHcCCccc-eEEEEecC
Q 019332 288 HLYPKFLEMIIPHIKEGKIVYVEDMA--EGLESAPATLIGLFSGRNVG-KQVVAVAP 341 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~~~~~--~~l~~~~~a~~~~~~~~~~g-kvvv~~~~ 341 (342)
+...++++++++++.+|++++.+..+ |+|+++++|++.+.+++..| |+|+++++
T Consensus 306 ~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~l~~~~~A~~~l~~g~~~Gkkvvv~~~~ 362 (371)
T 3gqv_A 306 QFGEDLWRIAGQLVEDGRLVHHPLRVVQGGFDHIKQGMELVRKGELSGEKLVVRLEG 362 (371)
T ss_dssp HHHHHHHHHHHHHHHTTSSCCCCEEEEEECHHHHHHHHHHHHTTCCSSCEEEEEECC
T ss_pred HHHHHHHHHHHHHHHCCeeeCCcCeecCCcHHHHHHHHHHHHcCCCceEEEEEEeCC
Confidence 22345567889999999999876665 69999999999999998887 56666654
|
| >4dvj_A Putative zinc-dependent alcohol dehydrogenase Pro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.99A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=100.00 E-value=8.8e-53 Score=380.01 Aligned_cols=316 Identities=15% Similarity=0.161 Sum_probs=267.0
Q ss_pred cccccEEEEecccCCC-CCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 4 MVRNKQVILKDYVSGF-PKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~-p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
|++|||+++.++ ++ .++..+++++ +|.| .++++||+|||.++|||++|++.+.|..+...+|.++|||++| +
T Consensus 20 m~~MkA~~~~~~--~~~~~~~~l~~~~--~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G--~ 92 (363)
T 4dvj_A 20 FQSMKAVGYNKP--APITDDASLLDIE--LPKP-APAGHDILVEVKAVSVNPVDYKVRRSTPPDGTDWKVIGYDAAG--I 92 (363)
T ss_dssp CCEEEEEEBSSC--CCTTSTTSSEEEE--EECC-CCCTTEEEEEEEEEECCHHHHHHHHHCCC--CCSBCCCCCEEE--E
T ss_pred hheeEEEEEecc--CCCCCCceEEEee--cCCC-CCCCCEEEEEEEEEEeCHHHHHHHcCCCCCCCCCCcccceeEE--E
Confidence 578999999988 53 2235677765 4555 4589999999999999999999999876656778999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCC-----
Q 019332 83 AKVLDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPK----- 151 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~----- 151 (342)
|+++|++|++|++||+|+++ |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.++++
T Consensus 93 V~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~ 170 (363)
T 4dvj_A 93 VSAVGPDVTLFRPGDEVFYAGSIIRPGTNAEFHLVDERIVGRK-PKTLDWA-EAAALPLTSITAWEAFFDRLDVNKPVPG 170 (363)
T ss_dssp EEEECTTCCSCCTTCEEEECCCTTSCCSCBSEEEEEGGGCEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCTTSCCTT
T ss_pred EEEeCCCCCCCCCCCEEEEccCCCCCccceEEEEeCHHHeeEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCcCcCcCC
Confidence 99999999999999999985 79999999999999999 9995444 37888889999999998888888
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+|++|||+||+|++|++++|+|+. .|++|++++++++|+++++ ++|++.++|+++ ++.+.+++..++++|++|||+
T Consensus 171 ~g~~VlV~Ga~G~vG~~a~qlak~~~g~~Vi~~~~~~~~~~~~~-~lGad~vi~~~~--~~~~~v~~~~~~g~Dvvid~~ 247 (363)
T 4dvj_A 171 AAPAILIVGGAGGVGSIAVQIARQRTDLTVIATASRPETQEWVK-SLGAHHVIDHSK--PLAAEVAALGLGAPAFVFSTT 247 (363)
T ss_dssp SEEEEEEESTTSHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHH-HTTCSEEECTTS--CHHHHHHTTCSCCEEEEEECS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHhcCCEEEEEeCCHHHHHHHH-HcCCCEEEeCCC--CHHHHHHHhcCCCceEEEECC
Confidence 899999999999999999999998 5889999999999999999 999999999975 688888887545999999999
Q ss_pred Ch-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-------ccchHHHHHHHHHHHH
Q 019332 231 GG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-------YHLYPKFLEMIIPHIK 302 (342)
Q Consensus 231 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~ 302 (342)
|+ ..+..++++|+++|+++.+|... ..+...+..+++++.+...... .....+.++++++++.
T Consensus 248 g~~~~~~~~~~~l~~~G~iv~~g~~~---------~~~~~~~~~k~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 318 (363)
T 4dvj_A 248 HTDKHAAEIADLIAPQGRFCLIDDPS---------AFDIMLFKRKAVSIHHELMFTRPMFGTPDMSEQGRLLNDVSRLVD 318 (363)
T ss_dssp CHHHHHHHHHHHSCTTCEEEECSCCS---------SCCGGGGTTTTCEEEECCTTHHHHHTCTTTHHHHHHHHHHHHHHH
T ss_pred CchhhHHHHHHHhcCCCEEEEECCCC---------ccchHHHhhccceEEEEEeeccccccCcchhhHHHHHHHHHHHHH
Confidence 98 58899999999999999986422 2344556677888877544321 1122567899999999
Q ss_pred cCCceeeeeeee---ccccHHHHHHHHHcCCccceEEEEec
Q 019332 303 EGKIVYVEDMAE---GLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 303 ~g~~~~~~~~~~---~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
+|.+++.+..++ +++++++|++.+.+++..||+|+++.
T Consensus 319 ~g~l~~~i~~~~~~~~l~~~~~A~~~~~~~~~~GKvVl~~~ 359 (363)
T 4dvj_A 319 EGRLRTTLTNRLSPINAANLKQAHALVESGTARGKVVIEGF 359 (363)
T ss_dssp HTSSCCCEEEEECSCSHHHHHHHHHHHHHTCCCSEEEEECS
T ss_pred CCCeeccccceecCCCHHHHHHHHHHHHhCCCceEEEEeCc
Confidence 999999888766 99999999999999999999999874
|
| >3uko_A Alcohol dehydrogenase class-3; alcohol dehydrogenase III, homodimer, reduction of GSNO, NAD binding, oxidoreductase; HET: NAD SO4; 1.40A {Arabidopsis thaliana} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-52 Score=379.99 Aligned_cols=315 Identities=19% Similarity=0.236 Sum_probs=269.0
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
++++|||+++.++ +.| +++++.+.| +++++||||||+++|||++|++.+.|..+...+|.++|||++| +
T Consensus 5 ~~~tmkA~v~~~~--~~~----l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G--~ 73 (378)
T 3uko_A 5 QVITCKAAVAYEP--NKP----LVIEDVQVA---PPQAGEVRIKILYTALCHTDAYTWSGKDPEGLFPCILGHEAAG--I 73 (378)
T ss_dssp SCEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEE--E
T ss_pred cceeeEEEEEecC--CCc----cEEEEecCC---CCCCCeEEEEEEEeecCHHHHHHhcCCCCCCCCCccCCccceE--E
Confidence 5678999999998 766 677765555 5589999999999999999999999876666789999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec----------------------------------------------------cccceeEe
Q 019332 83 AKVLDSENPEFKKGDLVWGM----------------------------------------------------TGWEEYSL 110 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~~~ 110 (342)
|+++|++|++|++||||++. |+|+||++
T Consensus 74 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~~g~~~~~~~g~~~~~~~~~G~~aey~~ 153 (378)
T 3uko_A 74 VESVGEGVTEVQAGDHVIPCYQAECRECKFCKSGKTNLCGKVRSATGVGIMMNDRKSRFSVNGKPIYHFMGTSTFSQYTV 153 (378)
T ss_dssp EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHHTSCSCCCSSHHHHTTTCCTTTSSCSEEETTEEEBCCTTTCCSBSEEE
T ss_pred EEEeCCCCCcCCCCCEEEEecCCCCCCChhhhCcCcCcCcCcccccccccccccCccccccCCcccccccCCcceEeEEE
Confidence 99999999999999999852 48999999
Q ss_pred ecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhh
Q 019332 111 VTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK 189 (342)
Q Consensus 111 v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~ 189 (342)
++++.++++ |+++++. ++|.+++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|
T Consensus 154 v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~q~a~~~Ga~~Vi~~~~~~~~ 230 (378)
T 3uko_A 154 VHDVSVAKI-DPTAPLD-KVCLLGCGVPTGLGAVWNTAKVEPGSNVAIFGL-GTVGLAVAEGAKTAGASRIIGIDIDSKK 230 (378)
T ss_dssp EEGGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCCEEEECC-SHHHHHHHHHHHHHTCSCEEEECSCTTH
T ss_pred echhheEEC-CCCCCHH-HhhhhhhhHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHH
Confidence 999999999 9995444 388889999999999988899999999999997 9999999999999999 89999999999
Q ss_pred HHHHHHHcCCCeeEecC--CchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccc
Q 019332 190 IDLLKNKFGFDEAFNYK--EEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGV 265 (342)
Q Consensus 190 ~~~~~~~~g~~~v~~~~--~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~ 265 (342)
+++++ ++|+++++|++ +. ++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... ....
T Consensus 231 ~~~a~-~lGa~~vi~~~~~~~-~~~~~i~~~~~gg~D~vid~~g~~~~~~~~~~~l~~g~G~iv~~G~~~~~----~~~~ 304 (378)
T 3uko_A 231 YETAK-KFGVNEFVNPKDHDK-PIQEVIVDLTDGGVDYSFECIGNVSVMRAALECCHKGWGTSVIVGVAASG----QEIS 304 (378)
T ss_dssp HHHHH-TTTCCEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEE
T ss_pred HHHHH-HcCCcEEEccccCch-hHHHHHHHhcCCCCCEEEECCCCHHHHHHHHHHhhccCCEEEEEcccCCC----Cccc
Confidence 99999 99999999997 45 89999999998899999999999 7889999999996 999999975432 1122
Q ss_pred cchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 266 HNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
.....++. ++++.++....+. ..+.++++++++.+|.+++ .+..+|+|+++++|++.+.+++.. |+||++++
T Consensus 305 ~~~~~~~~-~~~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~g~~~-Kvvi~~~~ 378 (378)
T 3uko_A 305 TRPFQLVT-GRVWKGTAFGGFK--SRTQVPWLVEKYMNKEIKVDEYITHNLTLGEINKAFDLLHEGTCL-RCVLDTSK 378 (378)
T ss_dssp ECTHHHHT-TCEEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHTTCTTCS-EEEEETTC
T ss_pred cCHHHHhc-CcEEEEEEecCCC--chHHHHHHHHHHHcCCCChhHheeeEeeHHHHHHHHHHHHCCCce-EEEEecCC
Confidence 23333443 7888876554322 2567899999999999885 477788999999999999988765 99999864
|
| >2j8z_A Quinone oxidoreductase; medium-chain dehydrogenase- reductases, QUIN oxidoreductase, oxidative stress response; HET: NAP; 2.50A {Homo sapiens} PDB: 2oby_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.8e-52 Score=377.13 Aligned_cols=320 Identities=23% Similarity=0.303 Sum_probs=269.7
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYG 81 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g 81 (342)
+|.+|||+++.++ |.| +.+++++. |.| .++++||+|||.++|||++|++.+.|.++. ..+|.++|||++|
T Consensus 19 ~~~~Mka~~~~~~--g~~--~~l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p~v~G~E~~G-- 89 (354)
T 2j8z_A 19 YFQSMLAVHFDKP--GGP--ENLYVKEV--AKP-SPGEGEVLLKVAASALNRADLMQRQGQYDPPPGASNILGLEASG-- 89 (354)
T ss_dssp --CEEEEEEESSC--SSG--GGEEEEEE--ECC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCCTTSCSSSCSEEEE--
T ss_pred chhheeEEEEccC--CCc--cceEEeec--CCC-CCCCCeEEEEEEEeecCHHHHHHhCCCCCCCCCCCcccceeeEE--
Confidence 4678999999988 766 45666654 445 458999999999999999999998886532 2468999999776
Q ss_pred EEEEecCCC-CCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 82 VAKVLDSEN-PEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 82 ~v~~vG~~v-~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+|+++|++| ++|++||+|+++ |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+++++|++||
T Consensus 90 ~V~~vG~~v~~~~~vGdrV~~~~~~G~~aey~~v~~~~~~~i-P~~ls~~-~aa~l~~~~~tA~~al~~~~~~~~g~~vl 167 (354)
T 2j8z_A 90 HVAELGPGCQGHWKIGDTAMALLPGGGQAQYVTVPEGLLMPI-PEGLTLT-QAAAIPEAWLTAFQLLHLVGNVQAGDYVL 167 (354)
T ss_dssp EEEEECSCC--CCCTTCEEEEECSSCCSBSEEEEEGGGEEEC-CTTCCHH-HHTTSHHHHHHHHHHHTTTSCCCTTCEEE
T ss_pred EEEEECCCcCCCCCCCCEEEEecCCCcceeEEEeCHHHcEEC-CCCCCHH-HHHhccchHHHHHHHHHHhcCCCCCCEEE
Confidence 999999999 999999999987 89999999999999999 9994443 27789999999999997788999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLD 236 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 236 (342)
|+||+|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+. ++.+.+.+.+++ ++|++|||+|+..+.
T Consensus 168 V~Ga~ggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~d~vi~~~G~~~~~ 245 (354)
T 2j8z_A 168 IHAGLSGVGTAAIQLTRMAGAIPLVTAGSQKKLQMAE-KLGAAAGFNYKKE-DFSEATLKFTKGAGVNLILDCIGGSYWE 245 (354)
T ss_dssp ESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTSCEEEEEESSCGGGHH
T ss_pred EECCccHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCcEEEecCCh-HHHHHHHHHhcCCCceEEEECCCchHHH
Confidence 9999999999999999999999999999999999997 9999999999887 888999998876 899999999999899
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccch-HHHHhcceeeecceecccccch-----HHHHHHHHHHHHcC---Cce
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNL-MYLVTKRVRMEGFLVRDYYHLY-----PKFLEMIIPHIKEG---KIV 307 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~g---~~~ 307 (342)
.++++|+++|+++.+|...+. ....+. ..++.+++++.++........+ .+.++++++++.+| .++
T Consensus 246 ~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~~~~l~ 320 (354)
T 2j8z_A 246 KNVNCLALDGRWVLYGLMGGG-----DINGPLFSKLLFKRGSLITSLLRSRDNKYKQMLVNAFTEQILPHFSTEGPQRLL 320 (354)
T ss_dssp HHHHHEEEEEEEEECCCTTCS-----CCCSCHHHHHHHTTCEEEECCSTTCCHHHHHHHHHHHHHHTGGGGTC---CCCC
T ss_pred HHHHhccCCCEEEEEeccCCC-----ccCCChhHHHHhCCCEEEEEEcccccccccHHHHHHHHHHHHHHHHcCCCcccc
Confidence 999999999999999975542 112344 5677889999887654432111 22345688899999 999
Q ss_pred eeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 308 YVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 308 ~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
+.+..+|+|+++++|++.+.+++..||+|++++
T Consensus 321 ~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 353 (354)
T 2j8z_A 321 PVLDRIYPVTEIQEAHKYMEANKNIGKIVLELP 353 (354)
T ss_dssp CCEEEEEEGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred CccceEEcHHHHHHHHHHHHhCCCCceEEEecC
Confidence 989899999999999999999888899999875
|
| >3s2e_A Zinc-containing alcohol dehydrogenase superfamily; FURX, oxidoreductase; HET: NAD; 1.76A {Ralstonia eutropha} PDB: 3s1l_A* 3s2f_A* 3s2g_A* 3s2i_A* 1llu_A* 3meq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.9e-52 Score=372.63 Aligned_cols=306 Identities=19% Similarity=0.239 Sum_probs=267.2
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAK 84 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~ 84 (342)
+|||++++++ |+| +++++.+. | +++++||||||.++|||++|++.+.|.++. ..+|.++|||++| +|+
T Consensus 2 ~MkA~~~~~~--g~~----l~~~~~~~--P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~v~G~E~~G--~V~ 70 (340)
T 3s2e_A 2 MMKAAVVRAF--GAP----LTIDEVPV--P-QPGPGQVQVKIEASGVCHTDLHAADGDWPVKPTLPFIPGHEGVG--YVS 70 (340)
T ss_dssp EEEEEEBCST--TSC----CEEEEEEC--C-CCCTTCEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEE--EEE
T ss_pred ceEEEEEecC--CCC----CEEEEccC--C-CCCCCeEEEEEEEeccCHHHHHHHcCCCCCCCCCCcccCCcceE--EEE
Confidence 4799999988 766 67766555 4 468999999999999999999999987643 4579999999776 999
Q ss_pred EecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhcc
Q 019332 85 VLDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l 133 (342)
++|++|++|++||||+. .|+|+||++++++.++++ |+++++. ++|++
T Consensus 71 ~vG~~v~~~~vGdrV~~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l 148 (340)
T 3s2e_A 71 AVGSGVSRVKEGDRVGVPWLYSACGYCEHCLQGWETLCEKQQNTGYSVNGGYGEYVVADPNYVGLL-PDKVGFV-EIAPI 148 (340)
T ss_dssp EECSSCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEEC-CTTSCHH-HHGGG
T ss_pred EECCCCCcCCCCCEEEecCCCCCCCCChHHhCcCcccCccccccCCCCCCcceeEEEechHHEEEC-CCCCCHH-Hhhcc
Confidence 99999999999999942 279999999999999999 9995444 38889
Q ss_pred CCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHH
Q 019332 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNE 213 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~ 213 (342)
++++.|||+++ +..++++|++|||+|+ |++|++++|+|+..|++|++++++++|+++++ ++|++.++|+++. ++.+
T Consensus 149 ~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~ 224 (340)
T 3s2e_A 149 LCAGVTVYKGL-KVTDTRPGQWVVISGI-GGLGHVAVQYARAMGLRVAAVDIDDAKLNLAR-RLGAEVAVNARDT-DPAA 224 (340)
T ss_dssp GTHHHHHHHHH-HTTTCCTTSEEEEECC-STTHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHH
T ss_pred cchhHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-HcCCCEEEeCCCc-CHHH
Confidence 99999999999 5679999999999997 99999999999999999999999999999999 9999999999987 8888
Q ss_pred HHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 214 ALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 214 ~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
.+++ +.+++|++||++|+ ..+..++++|+++|+++.+|...+ ........++.+++++.++.... .+
T Consensus 225 ~~~~-~~g~~d~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~~-----~~ 292 (340)
T 3s2e_A 225 WLQK-EIGGAHGVLVTAVSPKAFSQAIGMVRRGGTIALNGLPPG------DFGTPIFDVVLKGITIRGSIVGT-----RS 292 (340)
T ss_dssp HHHH-HHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCSS------EEEEEHHHHHHTTCEEEECCSCC-----HH
T ss_pred HHHH-hCCCCCEEEEeCCCHHHHHHHHHHhccCCEEEEeCCCCC------CCCCCHHHHHhCCeEEEEEecCC-----HH
Confidence 8888 43489999999987 789999999999999999987543 22345667788999998876655 67
Q ss_pred HHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 293 FLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
.++++++++.+|.+++.+. .++|+++++|++.+.+++..||+||++++
T Consensus 293 ~~~~~~~l~~~g~l~~~~~-~~~l~~~~~A~~~~~~~~~~Gkvvv~~~~ 340 (340)
T 3s2e_A 293 DLQESLDFAAHGDVKATVS-TAKLDDVNDVFGRLREGKVEGRVVLDFSR 340 (340)
T ss_dssp HHHHHHHHHHTTSCCCCEE-EECGGGHHHHHHHHHTTCCCSEEEEECCC
T ss_pred HHHHHHHHHHhCCCCceEE-EEeHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 7999999999999998654 56999999999999999999999999864
|
| >4a27_A Synaptic vesicle membrane protein VAT-1 homolog-L; oxidoreductase; 2.10A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=9.7e-53 Score=378.26 Aligned_cols=322 Identities=21% Similarity=0.276 Sum_probs=261.5
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v 83 (342)
|+|||+++.++ |.| +++++++ .|.| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++| +|
T Consensus 2 m~mka~~~~~~--g~~--~~l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~e~~G--~V 72 (349)
T 4a27_A 2 MEMRAVVLAGF--GGL--NKLRLFR--KAMP-EPQDGELKIRVKACGLNFIDLMVRQGNIDNPPKTPLVPGFECSG--IV 72 (349)
T ss_dssp CCEEEEEECSS--SSG--GGEEEEE--ECCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSEEEE--EE
T ss_pred ceeEEEEEccC--CCc--ceeEEEe--cCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCcCCCCCCCccccceeEE--EE
Confidence 57899999998 776 4566665 4455 45899999999999999999999998763 34678999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 84 KVLDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
+++|++|++|++||+|+++ |+|+||+.++.+.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|
T Consensus 73 ~~vG~~v~~~~~GdrV~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~G 150 (349)
T 4a27_A 73 EALGDSVKGYEIGDRVMAFVNYNAWAEVVCTPVEFVYKI-PDDMSFS-EAAAFPMNFVTAYVMLFEVANLREGMSVLVHS 150 (349)
T ss_dssp EEECTTCCSCCTTCEEEEECSSCCSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHHTTSCCCTTCEEEESS
T ss_pred EEeCCCCCCCCCCCEEEEecCCCcceEEEEecHHHeEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhcCCCCCCEEEEEc
Confidence 9999999999999999987 89999999999999999 9995444 37888899999999998889999999999999
Q ss_pred CCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHH
Q 019332 161 ASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVL 239 (342)
Q Consensus 161 a~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~ 239 (342)
++|++|++++|+|+..| ++|++++ ++++.+.++ +|++++++ ++. ++.+.+++.+++++|++|||+|++.+..++
T Consensus 151 a~G~vG~~a~qla~~~g~~~V~~~~-~~~~~~~~~--~ga~~~~~-~~~-~~~~~~~~~~~~g~Dvv~d~~g~~~~~~~~ 225 (349)
T 4a27_A 151 AGGGVGQAVAQLCSTVPNVTVFGTA-STFKHEAIK--DSVTHLFD-RNA-DYVQEVKRISAEGVDIVLDCLCGDNTGKGL 225 (349)
T ss_dssp TTSHHHHHHHHHHTTSTTCEEEEEE-CGGGHHHHG--GGSSEEEE-TTS-CHHHHHHHHCTTCEEEEEEECC-------C
T ss_pred CCcHHHHHHHHHHHHcCCcEEEEeC-CHHHHHHHH--cCCcEEEc-CCc-cHHHHHHHhcCCCceEEEECCCchhHHHHH
Confidence 99999999999999985 5999988 566767664 89999999 666 899999999877999999999998789999
Q ss_pred HhhhhCCEEEEEceeccccCCC-----------CccccchHHHHhcceeeecceecccc------cchHHHHHHHHHHHH
Q 019332 240 LNMKIHGRIAVCGMISQYNLDR-----------PEGVHNLMYLVTKRVRMEGFLVRDYY------HLYPKFLEMIIPHIK 302 (342)
Q Consensus 240 ~~l~~~G~~v~~g~~~~~~~~~-----------~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~ 302 (342)
++++++|+++.+|......... .........++.++.++.++....+. ....+.++++++++.
T Consensus 226 ~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 305 (349)
T 4a27_A 226 SLLKPLGTYILYGSSNMVTGETKSFFSFAKSWWQVEKVNPIKLYEENKVIAGFSLLNLLFKQGRAGLIRGVVEKLIGLYN 305 (349)
T ss_dssp TTEEEEEEEEEEC-------------------------CHHHHHHHTCEEEEECHHHHHHTSCCHHHHHHHHHHHHHHHH
T ss_pred HHhhcCCEEEEECCCcccccccccccccccccccccccCHHHHhhcCceEEEEeehheeccccchHHHHHHHHHHHHHHH
Confidence 9999999999999754211000 00123455677788888887654331 233678999999999
Q ss_pred cCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecCC
Q 019332 303 EGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 303 ~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
+|.+++.+..+|+++++++|++.+.+++..||+|++++++
T Consensus 306 ~g~l~~~i~~~~~l~~~~~A~~~l~~~~~~GKvvi~~~~~ 345 (349)
T 4a27_A 306 QKKIKPVVDSLWALEEVKEAMQRIHDRGNIGKLILDVEKT 345 (349)
T ss_dssp TTSCCCCEEEEECGGGHHHHHHHHHTTCCSSEEEEETTCC
T ss_pred CCCccccccceECHHHHHHHHHHHHhCCCCceEEEecCCC
Confidence 9999999999999999999999999999999999998764
|
| >3gaz_A Alcohol dehydrogenase superfamily protein; oxidoreductase, PSI-II, alcohol dehydrogenase superf structural genomics; 1.96A {Novosphingobium aromaticivorans} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-52 Score=374.91 Aligned_cols=313 Identities=17% Similarity=0.265 Sum_probs=265.9
Q ss_pred CCc-cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC--CccccCCCCCcc
Q 019332 1 MPE-MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--SYVESFKPGMPI 77 (342)
Q Consensus 1 m~~-~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--~~~~p~~~G~e~ 77 (342)
|++ |.+|||+++.++ +.| +++++.+. | .++++||||||.++|||++|++.+.|... ...+|.++|||+
T Consensus 1 Ms~~~~~mka~~~~~~--~~~----l~~~~~~~--P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~P~v~G~E~ 71 (343)
T 3gaz_A 1 MSLTTPTMIAAVVEEA--NGP----FVLRKLAR--P-QPAPGQVLVQIEASGTNPLDAKIRAGEAPHAQQPLPAILGMDL 71 (343)
T ss_dssp -----CEEEEEEECST--TCC----EEEEEEEC--C-CCCTTEEEEEEEEEECCHHHHHHHTTCCGGGCCCSSBCCCCEE
T ss_pred CCCCchhheEEEEecC--CCc----eEEEeccC--C-CCCCCEEEEEEEEEEeCHhhHHHhCCCCCCCCCCCCcccCcce
Confidence 665 478999999998 766 67766544 4 45899999999999999999999888642 245789999997
Q ss_pred cccEEEEEecCCCCCCCCCCEEEec--------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcC
Q 019332 78 SGYGVAKVLDSENPEFKKGDLVWGM--------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCS 149 (342)
Q Consensus 78 ~G~g~v~~vG~~v~~~~vGd~V~~~--------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~ 149 (342)
+| +|+++|++|++|++||+|+++ |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.++
T Consensus 72 ~G--~V~~vG~~v~~~~vGdrV~~~~~g~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~ 147 (343)
T 3gaz_A 72 AG--TVVAVGPEVDSFRVGDAVFGLTGGVGGLQGTHAQFAAVDARLLASK-PAALTMR-QASVLPLVFITAWEGLVDRAQ 147 (343)
T ss_dssp EE--EEEEECTTCCSCCTTCEEEEECCSSTTCCCSSBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHTTTTC
T ss_pred EE--EEEEECCCCCCCCCCCEEEEEeCCCCCCCcceeeEEEecHHHeeeC-CCCCCHH-HHHHhhhhHHHHHHHHHHhcC
Confidence 76 999999999999999999986 78999999999999999 9995444 378888899999999988899
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid 228 (342)
+++|++|||+||+|++|++++|+|+..|++|+++ .+++++++++ ++|++. ++ ++. ++.+.+++.+++ ++|++||
T Consensus 148 ~~~g~~VlV~Ga~g~iG~~~~q~a~~~Ga~Vi~~-~~~~~~~~~~-~lGa~~-i~-~~~-~~~~~~~~~~~~~g~D~vid 222 (343)
T 3gaz_A 148 VQDGQTVLIQGGGGGVGHVAIQIALARGARVFAT-ARGSDLEYVR-DLGATP-ID-ASR-EPEDYAAEHTAGQGFDLVYD 222 (343)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEE-ECHHHHHHHH-HHTSEE-EE-TTS-CHHHHHHHHHTTSCEEEEEE
T ss_pred CCCCCEEEEecCCCHHHHHHHHHHHHCCCEEEEE-eCHHHHHHHH-HcCCCE-ec-cCC-CHHHHHHHHhcCCCceEEEE
Confidence 9999999999999999999999999999999999 7889999998 999988 77 555 888999998887 8999999
Q ss_pred CCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc------ccchHHHHHHHHHHHH
Q 019332 229 NVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY------YHLYPKFLEMIIPHIK 302 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~ 302 (342)
|+|++.+..++++|+++|+++.+|.... .....+..+++++.++..... +....+.++++++++.
T Consensus 223 ~~g~~~~~~~~~~l~~~G~iv~~g~~~~---------~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~ 293 (343)
T 3gaz_A 223 TLGGPVLDASFSAVKRFGHVVSCLGWGT---------HKLAPLSFKQATYSGVFTLHTLLANEGLAHFGEMLREADALVQ 293 (343)
T ss_dssp SSCTHHHHHHHHHEEEEEEEEESCCCSC---------CCCHHHHHTTCEEEECCTTHHHHHTCSHHHHHHHHHHHHHHHH
T ss_pred CCCcHHHHHHHHHHhcCCeEEEEcccCc---------cccchhhhcCcEEEEEEeccchhcccchHHHHHHHHHHHHHHH
Confidence 9999999999999999999999987432 244556778898887654221 2234578999999999
Q ss_pred cCCceeeee-eeeccccHHHHHHHHHcCCc----cceEEEEec
Q 019332 303 EGKIVYVED-MAEGLESAPATLIGLFSGRN----VGKQVVAVA 340 (342)
Q Consensus 303 ~g~~~~~~~-~~~~l~~~~~a~~~~~~~~~----~gkvvv~~~ 340 (342)
+|.+++.+. .+|+|+++++|++.+.+++. .||+|+++.
T Consensus 294 ~g~l~~~i~~~~~~l~~~~~A~~~~~~~~~~Gr~~GK~v~~~~ 336 (343)
T 3gaz_A 294 TGKLAPRLDPRTFSIAEIGSAYDAVLGRNDVPRQRGKIAITVE 336 (343)
T ss_dssp TTCCCCCBCSCCEETTCHHHHHHHHHTCTTCCCCSSBCEEECC
T ss_pred CCCcccCccCcEecHHHHHHHHHHHHcCCCcccccceEEEEec
Confidence 999999888 68999999999999998764 689999875
|
| >3tqh_A Quinone oxidoreductase; HET: NDP; 2.44A {Coxiella burnetii} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.2e-52 Score=371.82 Aligned_cols=306 Identities=24% Similarity=0.256 Sum_probs=258.0
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-----CCccccCCCCCcc
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-----GSYVESFKPGMPI 77 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-----~~~~~p~~~G~e~ 77 (342)
.|++|||+++.++ |.| +.+++++. |.| +++++||||||.++|||++|++.+.|.. ....+|.++|||+
T Consensus 3 ~m~~Mka~~~~~~--g~~--~~l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~ 75 (321)
T 3tqh_A 3 AMKEMKAIQFDQF--GPP--KVLKLVDT--PTP-EYRKNQMLIKVHAASLNPIDYKTRNGSGFVAKKLKNNLPSGLGYDF 75 (321)
T ss_dssp --CEEEEEEESSS--CSG--GGEEEEEE--ECC-CCCTTCEEEEEEEEECCHHHHHHHTTCSHHHHHHTTSCSBCCCCEE
T ss_pred ccccceEEEEccC--CCc--ceeEEEec--CCC-CCCCCEEEEEEEEEEcCHHHHHHhcCCccccccccCCCCCccccee
Confidence 3578999999999 877 45667665 445 4589999999999999999999888831 2345689999997
Q ss_pred cccEEEEEecCCCCCCCCCCEEEec-------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCC
Q 019332 78 SGYGVAKVLDSENPEFKKGDLVWGM-------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSP 150 (342)
Q Consensus 78 ~G~g~v~~vG~~v~~~~vGd~V~~~-------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~ 150 (342)
+| +|+++|++|++|++||||+++ |+|+||++++++.++++ |+++++. ++|+++++++|||+++ +.+++
T Consensus 76 ~G--~V~~vG~~v~~~~~GdrV~~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~ 150 (321)
T 3tqh_A 76 SG--EVIELGSDVNNVNIGDKVMGIAGFPDHPCCYAEYVCASPDTIIQK-LEKLSFL-QAASLPTAGLTALQAL-NQAEV 150 (321)
T ss_dssp EE--EEEEECTTCCSCCTTCEEEEECSTTTCCCCSBSEEEECGGGEEEC-CTTSCHH-HHHHSHHHHHHHHHHH-HHTTC
T ss_pred EE--EEEEeCCCCCCCCCCCEEEEccCCCCCCCcceEEEEecHHHhccC-CCCCCHH-HHhhhhhHHHHHHHHH-HhcCC
Confidence 76 999999999999999999976 78999999999999999 9994444 3788888999999999 77999
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchh-HHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD-LNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-~~~~i~~~~~~~~d~vid~ 229 (342)
++|++|||+||+|++|++++|+|+..|++|++++ +++++++++ ++|+++++|+++. + +.+.+ +++|++|||
T Consensus 151 ~~g~~vlV~Ga~G~vG~~a~q~a~~~Ga~vi~~~-~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~-----~g~D~v~d~ 222 (321)
T 3tqh_A 151 KQGDVVLIHAGAGGVGHLAIQLAKQKGTTVITTA-SKRNHAFLK-ALGAEQCINYHEE-DFLLAIS-----TPVDAVIDL 222 (321)
T ss_dssp CTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEE-CHHHHHHHH-HHTCSEEEETTTS-CHHHHCC-----SCEEEEEES
T ss_pred CCCCEEEEEcCCcHHHHHHHHHHHHcCCEEEEEe-ccchHHHHH-HcCCCEEEeCCCc-chhhhhc-----cCCCEEEEC
Confidence 9999999999899999999999999999999998 556688888 9999999999886 5 54443 369999999
Q ss_pred CChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceee
Q 019332 230 VGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYV 309 (342)
Q Consensus 230 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~ 309 (342)
+|++.+..++++++++|+++.+|..... ........+++++.++... ...+.++++++++.+|.+++.
T Consensus 223 ~g~~~~~~~~~~l~~~G~iv~~g~~~~~--------~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~l~~~g~l~~~ 290 (321)
T 3tqh_A 223 VGGDVGIQSIDCLKETGCIVSVPTITAG--------RVIEVAKQKHRRAFGLLKQ----FNIEELHYLGKLVSEDKLRIE 290 (321)
T ss_dssp SCHHHHHHHGGGEEEEEEEEECCSTTHH--------HHHHHHHHTTCEEECCCCC----CCHHHHHHHHHHHHTTSSCCC
T ss_pred CCcHHHHHHHHhccCCCEEEEeCCCCch--------hhhhhhhhcceEEEEEecC----CCHHHHHHHHHHHHCCCcccc
Confidence 9997779999999999999998764321 1223456678887774322 225779999999999999999
Q ss_pred eeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 310 EDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 310 ~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
+..+|+|+++++|++.+.+++..||+|+++.
T Consensus 291 i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 321 (321)
T 3tqh_A 291 ISRIFQLSEAVTAHELLETGHVRGKLVFKVR 321 (321)
T ss_dssp EEEEECGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred cccEEcHHHHHHHHHHHHcCCCCceEEEEeC
Confidence 9999999999999999999999999999874
|
| >1f8f_A Benzyl alcohol dehydrogenase; rossmann fold, oxidoreductase; HET: NAD; 2.20A {Acinetobacter calcoaceticus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-51 Score=374.00 Aligned_cols=315 Identities=19% Similarity=0.208 Sum_probs=266.5
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCccccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGY 80 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~ 80 (342)
|+.+++|||+++.++ |.+ +++++.+. | .++++||+|||.++|||++|++.+.|.++ ..+|.++|||++|
T Consensus 1 ms~~~~mka~~~~~~--g~~----l~~~~~~~--P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G- 69 (371)
T 1f8f_A 1 MSELKDIIAAVTPCK--GAD----FELQALKI--R-QPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSG- 69 (371)
T ss_dssp ---CEEEEEEEBCST--TCC----CEEEEEEE--C-CCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEE-
T ss_pred CCccccceEEEEcCC--CCC----eEEEEecC--C-CCCCCEEEEEEEEeecCchhHHHHcCCCC-CCCCcccCcccce-
Confidence 777788999999988 655 57766555 4 45899999999999999999999988653 3468999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEe----------------------------------------------------cccccee
Q 019332 81 GVAKVLDSENPEFKKGDLVWG----------------------------------------------------MTGWEEY 108 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~----------------------------------------------------~g~~~~~ 108 (342)
+|+++|++|++|++||||++ .|+|+||
T Consensus 70 -~V~~vG~~v~~~~~GdrV~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~~g~~~~~~~~~~G~~aey 148 (371)
T 1f8f_A 70 -IIEAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATY 148 (371)
T ss_dssp -EEEEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSE
T ss_pred -EEEEeCCCCCCCCCCCEEEecCCCCCCChhhhCcCccccccccccccccccccccccccccCCccccccccCCccccCe
Confidence 99999999999999999985 1689999
Q ss_pred EeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh
Q 019332 109 SLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 187 (342)
Q Consensus 109 ~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~ 187 (342)
++++++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++
T Consensus 149 ~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~~Vi~~~~~~ 225 (371)
T 1f8f_A 149 ALSRENNTVKV-TKDVPIE-LLGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVE 225 (371)
T ss_dssp EEEEGGGEEEE-CTTSCGG-GTGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCH
T ss_pred EEechhheEEC-CCCCCHH-HHHHhcchHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCH
Confidence 99999999999 9995544 378888999999999977789999999999995 9999999999999999 799999999
Q ss_pred hhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCcccc
Q 019332 188 DKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVH 266 (342)
Q Consensus 188 ~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~ 266 (342)
+|+++++ ++|++.++++++. ++.+.+++.+++++|++||++|+ ..+..++++|+++|+++.+|..... .....
T Consensus 226 ~~~~~a~-~lGa~~vi~~~~~-~~~~~~~~~~~gg~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~----~~~~~ 299 (371)
T 1f8f_A 226 SRLELAK-QLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQF 299 (371)
T ss_dssp HHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCC
T ss_pred HHHHHHH-HcCCCEEecCCcc-CHHHHHHHhcCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEeCCCCCC----Ccccc
Confidence 9999998 9999999999887 88999999887789999999998 7889999999999999999976431 01233
Q ss_pred chHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 267 NLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
+...++.+++++.++..... ...+.++++++++.+|.+++ .+.. |+|+++++|++.+.+++. +|+||++.
T Consensus 300 ~~~~~~~~~~~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~-~~l~~~~~A~~~~~~~~~-~Kvvv~~~ 371 (371)
T 1f8f_A 300 DVNDLLLGGKTILGVVEGSG--SPKKFIPELVRLYQQGKFPFDQLVKF-YAFDEINQAAIDSRKGIT-LKPIIKIA 371 (371)
T ss_dssp CHHHHHHTTCEEEECSGGGS--CHHHHHHHHHHHHHTTSCCGGGGEEE-EEGGGHHHHHHHHHHTSC-SEEEEECC
T ss_pred CHHHHHhCCCEEEEeCCCCC--chHHHHHHHHHHHHcCCCCcccceeE-ecHHHHHHHHHHHHCCCc-eEEEEeeC
Confidence 45567788999988765432 12467899999999999986 3566 899999999999998875 79999863
|
| >1yb5_A Quinone oxidoreductase; medium-chain dehydrogenase/reductase, quinon reduction, structural genomics, structural genomics consort; HET: NAP; 1.85A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=9.2e-52 Score=371.70 Aligned_cols=315 Identities=23% Similarity=0.344 Sum_probs=268.8
Q ss_pred ccccEEEEecccCCCCCCCceEE-EEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYM-TESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGV 82 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~-~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~ 82 (342)
.+|||+++.++ |.| +.+++ ++ +|.| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++| +
T Consensus 28 ~~Mka~~~~~~--g~~--~~l~~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G--~ 98 (351)
T 1yb5_A 28 KLMRAVRVFEF--GGP--EVLKLRSD--IAVP-IPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAG--V 98 (351)
T ss_dssp CEEEEEEESSC--SSG--GGEEEEEE--EECC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEE--E
T ss_pred ceEEEEEEccC--CCc--ceeEEeee--cCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcCCceeEE--E
Confidence 46899999988 766 45666 45 4555 45899999999999999999998888653 24578999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEE
Q 019332 83 AKVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
|+++|++|++|++||||++. |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||
T Consensus 99 V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~-P~~l~~~-~aA~l~~~~~ta~~al~~~~~~~~g~~vlV 176 (351)
T 1yb5_A 99 IEAVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKL-PEKLDFK-QGAAIGIPYFTAYRALIHSACVKAGESVLV 176 (351)
T ss_dssp EEEECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTTHHHHHHHHHHHHTTSCCCTTCEEEE
T ss_pred EEEECCCCCCCCCCCEEEEeCCCCCcceeEEEECHHHeEEC-CCCCCHH-HHHhhhhHHHHHHHHHHHhhCCCCcCEEEE
Confidence 99999999999999999986 89999999999999999 9994443 378899999999999977789999999999
Q ss_pred ecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHH
Q 019332 159 SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDA 237 (342)
Q Consensus 159 ~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~ 237 (342)
+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+++.+++ ++|++|||+|+..+..
T Consensus 177 ~GasggiG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~G~~~~~~ 254 (351)
T 1yb5_A 177 HGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV-NYIDKIKKYVGEKGIDIIIEMLANVNLSK 254 (351)
T ss_dssp ETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST-THHHHHHHHHCTTCEEEEEESCHHHHHHH
T ss_pred ECCCChHHHHHHHHHHHCCCEEEEEeCChhHHHHHH-HcCCCEEEeCCCc-hHHHHHHHHcCCCCcEEEEECCChHHHHH
Confidence 999999999999999999999999999999999888 9999999999887 888899888876 8999999999988899
Q ss_pred HHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
++++++++|+++.+|.... .......++.+++++.++.+... ++...+.++.+.+++.+|.+++.+..+|+|
T Consensus 255 ~~~~l~~~G~iv~~g~~~~-------~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~l~~~~~~g~l~~~i~~~~~l 327 (351)
T 1yb5_A 255 DLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIGWLKPVIGSQYPL 327 (351)
T ss_dssp HHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGCCHHHHHHHHHHHHHHHHHTCCCCCEEEEEEG
T ss_pred HHHhccCCCEEEEEecCCC-------CccCHHHHHhCCcEEEEEEeecCCHHHHHHHHHHHHHHHHCCCccCccceEEcH
Confidence 9999999999999986321 12344566788999988754332 334456677788899999999999899999
Q ss_pred ccHHHHHHH-HHcCCccceEEEEe
Q 019332 317 ESAPATLIG-LFSGRNVGKQVVAV 339 (342)
Q Consensus 317 ~~~~~a~~~-~~~~~~~gkvvv~~ 339 (342)
+++++|++. +.+++..||+|+++
T Consensus 328 ~~~~~A~~~~~~~~~~~gKvvi~~ 351 (351)
T 1yb5_A 328 EKVAEAHENIIHGSGATGKMILLL 351 (351)
T ss_dssp GGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred HHHHHHHHHHHHhCCCCeEEEEeC
Confidence 999999998 66666789999974
|
| >2c0c_A Zinc binding alcohol dehydrogenase, domain containing 2; oxidoreductase, quinone oxidoreductase, medium-chain dehydrogenase/reductase; HET: NAP; 1.45A {Homo sapiens} PDB: 2x1h_A* 2x7h_A* 2wek_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-52 Score=374.80 Aligned_cols=326 Identities=25% Similarity=0.375 Sum_probs=273.5
Q ss_pred ccccccEEEEecccCCCCCCCceEE-EEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCccccc
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYM-TESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGY 80 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~-~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~ 80 (342)
++.+|||+++.++ |.+-.+.+++ ++ +|.| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++|
T Consensus 20 ~~~~MkA~~~~~~--g~~~~~~l~~~~~--~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~i~G~E~~G- 93 (362)
T 2c0c_A 20 FQSMMQKLVVTRL--SPNFREAVTLSRD--CPVP-LPGDGDLLVRNRFVGVNASDINYSAGRYDPSVKPPFDIGFEGIG- 93 (362)
T ss_dssp HCCEEEEEEECSC--CSSHHHHEEEEEE--EECC-CCCTTEEEEEEEEEECCTTHHHHHTTTTCTTCCSCEECCSEEEE-
T ss_pred chhhceEEEEeec--CCCccceeEEEee--cCCC-CCCCCeEEEEEEEeccCHHHHHHhcCCCCCCCCCCCCCCceeEE-
Confidence 4567999999998 6531134566 55 5555 45899999999999999999999888653 24578999999776
Q ss_pred EEEEEecCCCC-CCCCCCEEEec--cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 81 GVAKVLDSENP-EFKKGDLVWGM--TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 81 g~v~~vG~~v~-~~~vGd~V~~~--g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+|+++|++|+ +|++||||+++ |+|+||++++++.++++ |+. .. ++|+++.+++|||+++.+.+++++|++||
T Consensus 94 -~V~~vG~~V~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~~-P~~--~~-~aaal~~~~~ta~~al~~~~~~~~g~~Vl 168 (362)
T 2c0c_A 94 -EVVALGLSASARYTVGQAVAYMAPGSFAEYTVVPASIATPV-PSV--KP-EYLTLLVSGTTAYISLKELGGLSEGKKVL 168 (362)
T ss_dssp -EEEEECTTGGGTCCTTCEEEEECSCCSBSEEEEEGGGCEEC-SSS--CH-HHHTTTTHHHHHHHHHHHHTCCCTTCEEE
T ss_pred -EEEEECCCccCCCCCCCEEEEccCCcceeEEEEcHHHeEEC-CCC--ch-HhhcccchHHHHHHHHHHhcCCCCCCEEE
Confidence 9999999999 99999999986 89999999999999999 886 33 57889999999999998888999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDA 237 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~ 237 (342)
|+||+|++|++++|+|+..|++|+++++++++++.++ ++|++.++++++. ++.+.+++.+++++|++|||+|+..+..
T Consensus 169 V~Ga~G~iG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~ 246 (362)
T 2c0c_A 169 VTAAAGGTGQFAMQLSKKAKCHVIGTCSSDEKSAFLK-SLGCDRPINYKTE-PVGTVLKQEYPEGVDVVYESVGGAMFDL 246 (362)
T ss_dssp ETTTTBTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTTS-CHHHHHHHHCTTCEEEEEECSCTHHHHH
T ss_pred EeCCCcHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCh-hHHHHHHHhcCCCCCEEEECCCHHHHHH
Confidence 9999999999999999999999999999999999999 8999999999887 8888888887558999999999988999
Q ss_pred HHHhhhhCCEEEEEceeccccCCC--Ccc--ccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeee--
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDR--PEG--VHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVED-- 311 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~--~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~-- 311 (342)
++++++++|+++.+|...+..... +.. ......++.+++++.++....+.....+.++++++++.+|.+++.+.
T Consensus 247 ~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~ 326 (362)
T 2c0c_A 247 AVDALATKGRLIVIGFISGYQTPTGLSPVKAGTLPAKLLKKSASVQGFFLNHYLSKYQAAMSHLLEMCVSGDLVCEVDLG 326 (362)
T ss_dssp HHHHEEEEEEEEECCCGGGTTSSSCCCCCCCTTHHHHHHHHTCEEEECCGGGCGGGHHHHHHHHHHHHHTTCSCCCEECS
T ss_pred HHHHHhcCCEEEEEeCCCCcCcccccccccccccHHHHHhhcceEEEEEhhhhhhhHHHHHHHHHHHHHCCCeEeeeccc
Confidence 999999999999999865431100 000 01124567789999887765544445678999999999999998765
Q ss_pred ------eeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 312 ------MAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 312 ------~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
..++|+++++|++.+.+++..||+|+++++
T Consensus 327 ~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 362 (362)
T 2c0c_A 327 DLSPEGRFTGLESIFRAVNYMYMGKNTGKIVVELPH 362 (362)
T ss_dssp TTSTTCSCBSTTHHHHHHHHHHTTCCSBEEEEECCC
T ss_pred cccccccccCHHHHHHHHHHHHcCCCCceEEEEcCC
Confidence 456999999999999998888999998864
|
| >4eez_A Alcohol dehydrogenase 1; site-saturation mutagenesis, directed evolution, isobutyraldehyde, biofuel, oxidoreductase; HET: PG4; 1.90A {Lactococcus lactis subsp} PDB: 4eex_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.1e-51 Score=371.67 Aligned_cols=305 Identities=21% Similarity=0.221 Sum_probs=263.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++... ++ ..+++++. |.| .++|+||||||.|+|||++|++.+.|.++ ..+|.++|||++| +|+++
T Consensus 1 MKA~v~~~~--~~---~~~~l~e~--~~P-~~~p~eVLVkv~a~gic~~D~~~~~G~~~-~~~p~i~GhE~aG--~V~~v 69 (348)
T 4eez_A 1 MKAAVVRHN--PD---GYADLVEK--ELR-AIKPNEALLDMEYCGVCHTDLHVAAGDFG-NKAGTVLGHEGIG--IVKEI 69 (348)
T ss_dssp CEEEEECSS--CC---SSEEEEEC--CCC-CCCTTEEEEEEEEEECCHHHHHHHTTTTC-CCTTCBCCSEEEE--EEEEE
T ss_pred CeEEEEEcC--CC---CcEEEEEe--ECC-CCCCCEEEEEEEEEEECHHHHHHhcCCCC-CCCCcccceeEEE--EEEEE
Confidence 689988755 22 23566664 445 55899999999999999999999998764 3578999999776 99999
Q ss_pred cCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 87 DSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
|++|++|++||||++. |+|+||+.++++.++++ |++++.. ++|++++
T Consensus 70 G~~V~~~~~GdrV~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~G~~ae~~~~~~~~~~~i-P~~~~~~-~aa~l~~ 147 (348)
T 4eez_A 70 GADVSSLQVGDRVSVAWFFEGCGHCEYCVSGNETFCREVKNAGYSVDGGMAEEAIVVADYAVKV-PDGLDPI-EASSITC 147 (348)
T ss_dssp CTTCCSCCTTCEEEEESEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGSCBC-CTTSCHH-HHHHHHH
T ss_pred CceeeecccCCeEeecccccccCccccccCCcccccccccccccccCCcceeeccccccceeec-CCCCCHH-HHhhccc
Confidence 9999999999999752 78999999999999999 9994443 3889999
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA 214 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 214 (342)
+++|||+++ +.+++++|++|||+|+ |++|.+++|+++.. |++|++++++++|+++++ ++|++.++|+++. ++.++
T Consensus 148 ~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~~g~~a~~~a~~~~g~~Vi~~~~~~~r~~~~~-~~Ga~~~i~~~~~-~~~~~ 223 (348)
T 4eez_A 148 AGVTTYKAI-KVSGVKPGDWQVIFGA-GGLGNLAIQYAKNVFGAKVIAVDINQDKLNLAK-KIGADVTINSGDV-NPVDE 223 (348)
T ss_dssp HHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTSCCEEEEEESCHHHHHHHH-HTTCSEEEEC-CC-CHHHH
T ss_pred ceeeEEeee-cccCCCCCCEEEEEcC-CCccHHHHHHHHHhCCCEEEEEECcHHHhhhhh-hcCCeEEEeCCCC-CHHHH
Confidence 999999999 5678999999999997 99999999999866 669999999999999999 9999999999998 99999
Q ss_pred HHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHH
Q 019332 215 LKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPK 292 (342)
Q Consensus 215 i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 292 (342)
+++.+++ ++|.++|+.++ ..+..++++++++|+++.+|.... ....+...++.+++++.++.... ++
T Consensus 224 v~~~t~g~g~d~~~~~~~~~~~~~~~~~~l~~~G~~v~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~-----~~ 292 (348)
T 4eez_A 224 IKKITGGLGVQSAIVCAVARIAFEQAVASLKPMGKMVAVAVPNT------EMTLSVPTVVFDGVEVAGSLVGT-----RL 292 (348)
T ss_dssp HHHHTTSSCEEEEEECCSCHHHHHHHHHTEEEEEEEEECCCCSC------EEEECHHHHHHSCCEEEECCSCC-----HH
T ss_pred hhhhcCCCCceEEEEeccCcchhheeheeecCCceEEEEeccCC------CCccCHHHHHhCCeEEEEEecCC-----HH
Confidence 9999998 99999999988 788999999999999999987543 23445677888999999877655 66
Q ss_pred HHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 293 FLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 293 ~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.++++++++.+|++++.+ .+|||+++++|++.+++++..||+||+++
T Consensus 293 ~~~~~~~l~~~g~i~p~~-~~~~l~~~~~A~~~l~~g~~~GKvVl~~s 339 (348)
T 4eez_A 293 DLAEAFQFGAEGKVKPIV-ATRKLEEINDIIDEMKAGKIEGRMVIDFT 339 (348)
T ss_dssp HHHHHHHHHHTTSCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEEECC
T ss_pred HHHHHHHHHHcCCCEEEE-EEEeHHHHHHHHHHHHCCCCccEEEEEcc
Confidence 789999999999999865 57899999999999999999999999986
|
| >1wly_A CAAR, 2-haloacrylate reductase; NADPH-dependent oxidoreductase, oxidoreductase; 1.30A {Burkholderia SP} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.8e-52 Score=371.65 Aligned_cols=317 Identities=20% Similarity=0.258 Sum_probs=267.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-CC--ccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-GS--YVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-~~--~~~p~~~G~e~~G~g~v 83 (342)
|||+++.++ |.| +.+++++ .|.| .++++||+|||.++|||++|++.+.|.+ +. ..+|.++|||++| +|
T Consensus 2 Mka~~~~~~--g~~--~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~p~i~G~e~~G--~V 72 (333)
T 1wly_A 2 VMAAVIHKK--GGP--DNFVWEE--VKVG-SPGPGQVRLRNTAIGVNFLDTYHRAGIPHPLVVGEPPIVVGFEAAA--VV 72 (333)
T ss_dssp CEEEEESSC--SSG--GGEEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHC----------CCEECCCEEEE--EE
T ss_pred cEEEEEccc--CCc--ceeEEEe--ccCC-CCCCCeEEEEEEEEecCHHHHHHhCCCcCCCCCCCCCccccceeEE--EE
Confidence 699999998 766 4566655 5556 4589999999999999999999988855 12 3468999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccch--hhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 84 KVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYY--TGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~--~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+++|++|++|++||||++. |+|+||++++++.++++ |+++++. + +|+++.+++|||+++.+.++++++++||
T Consensus 73 ~~vG~~v~~~~~GdrV~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~~~aa~l~~~~~ta~~~l~~~~~~~~g~~vl 150 (333)
T 1wly_A 73 EEVGPGVTDFTVGERVCTCLPPLGAYSQERLYPAEKLIKV-PKDLDLD-DVHLAGLMLKGMTAQYLLHQTHKVKPGDYVL 150 (333)
T ss_dssp EEECTTCCSCCTTCEEEECSSSCCCSBSEEEEEGGGCEEC-CTTCCCC-HHHHHHHHHHHHHHHHHHHTTSCCCTTCEEE
T ss_pred EEECCCCCCCCCCCEEEEecCCCCcceeEEEecHHHcEeC-CCCCChH-HhCccchhhhHHHHHHHHHHhhCCCCCCEEE
Confidence 9999999999999999874 88999999999999999 9995444 4 5889999999999997778999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLD 236 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~ 236 (342)
|+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|+..+.
T Consensus 151 V~Ga~ggiG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~g~~~~~d~~~~-~~~~~i~~~~~~~~~d~vi~~~g~~~~~ 228 (333)
T 1wly_A 151 IHAAAGGMGHIMVPWARHLGATVIGTVSTEEKAETAR-KLGCHHTINYSTQ-DFAEVVREITGGKGVDVVYDSIGKDTLQ 228 (333)
T ss_dssp ETTTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHHTTCCEEEEEECSCTTTHH
T ss_pred EECCccHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCH-HHHHHHHHHhCCCCCeEEEECCcHHHHH
Confidence 9999999999999999999999999999999999998 8999999999887 888888888766 899999999998999
Q ss_pred HHHHhhhhCCEEEEEceeccccCCCCccccchH-HHHhcc--eeeecceeccc--ccchHHHHHHHHHHHHcCCceeeee
Q 019332 237 AVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM-YLVTKR--VRMEGFLVRDY--YHLYPKFLEMIIPHIKEGKIVYVED 311 (342)
Q Consensus 237 ~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~--~~~~~~~~~~~--~~~~~~~~~~~~~~~~~g~~~~~~~ 311 (342)
.++++++++|+++.+|...+. ....+.. .++.++ +++.++....+ +....+.++++++++.+|.+++.+.
T Consensus 229 ~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~ 303 (333)
T 1wly_A 229 KSLDCLRPRGMCAAYGHASGV-----ADPIRVVEDLGVRGSLFITRPALWHYMSNRSEIDEGSKCLFDAVKAGVLHSSVA 303 (333)
T ss_dssp HHHHTEEEEEEEEECCCTTCC-----CCCCCHHHHTTTTTSCEEECCCGGGGSCSHHHHHHHHHHHHHHHHTTSCCCCEE
T ss_pred HHHHhhccCCEEEEEecCCCC-----cCCCChhHhhhhcCCcEEEEEeehhhccCHHHHHHHHHHHHHHHHCCCcCCCcc
Confidence 999999999999999975532 1123344 566788 88888654221 2223467899999999999999998
Q ss_pred eeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 312 MAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 312 ~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
.+|+|+++++|++.+.+++..||+|+++++
T Consensus 304 ~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 333 (333)
T 1wly_A 304 KTFPLREAAAAHKYMGGRQTIGSIVLLPQA 333 (333)
T ss_dssp EEEEGGGHHHHHHHHHHCSCCSEEEEETTC
T ss_pred eEEeHHHHHHHHHHHHcCCCceEEEEEeCC
Confidence 999999999999999998888999998764
|
| >1zsy_A Mitochondrial 2-enoyl thioester reductase; medium-chain dehydrogenase/reductase, oxidoreductase, 2-ENOY thioester reductase; 1.75A {Homo sapiens} PDB: 2vcy_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3e-52 Score=376.20 Aligned_cols=319 Identities=19% Similarity=0.265 Sum_probs=261.8
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYG 81 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g 81 (342)
|+.+|||+++.++ |.|. +.+++++ .|.| .++++||+|||.++|||++|++.+.|.++. ..+|.++|||++|
T Consensus 23 m~~~mka~~~~~~--g~~~-~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~P~v~G~E~~G-- 94 (357)
T 1zsy_A 23 MPARVRALVYGHH--GDPA-KVVELKN--LELA-AVRGSDVRVKMLAAPINPSDINMIQGNYGLLPELPAVGGNEGVA-- 94 (357)
T ss_dssp CCCCEEEEEESSS--SCHH-HHEEEEE--ECCC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSEECCSCCEE--
T ss_pred CchhhEEEEEecC--CCcc-ceEEEee--ccCC-CCCCCEEEEEEEECCCCHHHhhHhcCCCCCCCCCCccccceEEE--
Confidence 4567999999988 7652 2255655 5555 458999999999999999999999886542 2468999999776
Q ss_pred EEEEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 82 VAKVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+|+++|++|++|++||||++. |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+++++|++||
T Consensus 95 ~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~i-P~~l~~~-~Aa~l~~~~~ta~~~l~~~~~~~~g~~Vl 172 (357)
T 1zsy_A 95 QVVAVGSNVTGLKPGDWVIPANAGLGTWRTEAVFSEEALIQV-PSDIPLQ-SAATLGVNPCTAYRMLMDFEQLQPGDSVI 172 (357)
T ss_dssp EEEEECTTCCSCCTTCEEEESSSCSCCSBSEEEEEGGGEEEE-CSSSCHH-HHHHTTSHHHHHHHHHHHSSCCCTTCEEE
T ss_pred EEEEeCCCCCCCCCCCEEEEcCCCCccceeEEecCHHHcEEC-CCCCCHH-HHhhhcccHHHHHHHHHHHhccCCCCEEE
Confidence 999999999999999999986 89999999999999999 9994443 37888889999999998878999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChh----hHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC--CccEEEeCCC
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKD----KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE--GIDIYFENVG 231 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~----~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~--~~d~vid~~g 231 (342)
|+|++|++|++++|+|+..|+++++++++++ +.++++ ++|+++++|+++. ..+.+.+.+.+ ++|++|||+|
T Consensus 173 V~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~--~~~~~~~~~~~~~~~Dvvid~~g 249 (357)
T 1zsy_A 173 QNASNSGVGQAVIQIAAALGLRTINVVRDRPDIQKLSDRLK-SLGAEHVITEEEL--RRPEMKNFFKDMPQPRLALNCVG 249 (357)
T ss_dssp ESSTTSHHHHHHHHHHHHHTCEEEEEECCCSCHHHHHHHHH-HTTCSEEEEHHHH--HSGGGGGTTSSSCCCSEEEESSC
T ss_pred EeCCcCHHHHHHHHHHHHcCCEEEEEecCccchHHHHHHHH-hcCCcEEEecCcc--hHHHHHHHHhCCCCceEEEECCC
Confidence 9999999999999999999999888886543 467888 9999999987532 22345566554 5999999999
Q ss_pred hhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCc
Q 019332 232 GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKI 306 (342)
Q Consensus 232 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~ 306 (342)
+.....++++++++|+++.+|...+. ....+...++.+++++.++....+ +....+.++++++++.+|.+
T Consensus 250 ~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l 324 (357)
T 1zsy_A 250 GKSSTELLRQLARGGTMVTYGGMAKQ-----PVVASVSLLIFKDLKLRGFWLSQWKKDHSPDQFKELILTLCDLIRRGQL 324 (357)
T ss_dssp HHHHHHHHTTSCTTCEEEECCCCTTC-----CBCCCHHHHHHSCCEEEECCHHHHHHHSCHHHHHHHHHHHHHHHHTTSS
T ss_pred cHHHHHHHHhhCCCCEEEEEecCCCC-----CCCCCHHHHHhcCceEEEEEcchhcccCCHHHHHHHHHHHHHHHHcCCC
Confidence 97777899999999999999865432 122344556779999998766432 22235678999999999999
Q ss_pred eeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 307 VYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 307 ~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++.+..+|+|+++++|++.+.+++..||+|+++
T Consensus 325 ~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 357 (357)
T 1zsy_A 325 TAPACSQVPLQDYQSALEASMKPFISSKQILTM 357 (357)
T ss_dssp CCCCEEEEEGGGHHHHHHHHTSSSCSSEEEEEC
T ss_pred cCccceEEcHHHHHHHHHHHHhCCCCCcEEEeC
Confidence 998888899999999999999988889999974
|
| >3two_A Mannitol dehydrogenase; cinnamyl-alcohol dehydrogenase, NADP(H) oxidoreductase; HET: NDP; 2.18A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.4e-52 Score=373.42 Aligned_cols=302 Identities=17% Similarity=0.175 Sum_probs=259.4
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
+|+|||+++.++ +.+ +++++.+.| .++++||||||.++|||++|++.+.|.++...+|.++|||++| +|
T Consensus 2 ~m~mka~~~~~~--~~~----l~~~~~~~P---~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~E~~G--~V 70 (348)
T 3two_A 2 RVQSKGFAIFSK--DEH----FKPHDFSRH---AVGPRDVLIDILYAGICHSDIHSAYSEWKEGIYPMIPGHEIAG--II 70 (348)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEEECHHHHHHHTTSSSCCCSSBCCCCCEEE--EE
T ss_pred ceEEEEEEEccC--CCC----CeEEEeeCC---CCCCCeEEEEEEEeeecccchhhhcCCCCCCCCCeecCcceeE--EE
Confidence 358999999988 654 677765555 5589999999999999999999999987666789999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec----------------------------------------cccceeEeecCCcceeecCCC
Q 019332 84 KVLDSENPEFKKGDLVWGM----------------------------------------TGWEEYSLVTAPQLFKIQHTD 123 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~----------------------------------------g~~~~~~~v~~~~~~~i~p~~ 123 (342)
+++|++|++|++||+|++. |+|+||++++.+.++++ |++
T Consensus 71 ~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~C~~g~~~~c~~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~i-P~~ 149 (348)
T 3two_A 71 KEVGKGVKKFKIGDVVGVGCFVNSCKACKPCKEHQEQFCTKVVFTYDCLDSFHDNEPHMGGYSNNIVVDENYVISV-DKN 149 (348)
T ss_dssp EEECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSSEEGGGTTEECCCSSBSEEEEEGGGCEEC-CTT
T ss_pred EEECCCCCCCCCCCEEEEeCCcCCCCCChhHhCCCcccCcccccccccccccccCCcCCccccceEEechhhEEEC-CCC
Confidence 9999999999999999752 89999999999999999 999
Q ss_pred CCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE
Q 019332 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF 203 (342)
Q Consensus 124 ~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~ 203 (342)
+++. ++|++++++.|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|++++++++|+++++ ++|++.++
T Consensus 150 ~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~v~ 225 (348)
T 3two_A 150 APLE-KVAPLLCAGITTYSPLKF-SKVTKGTKVGVAGF-GGLGSMAVKYAVAMGAEVSVFARNEHKKQDAL-SMGVKHFY 225 (348)
T ss_dssp SCHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSSTTHHHHH-HTTCSEEE
T ss_pred CCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-cHHHHHHHHHHHHCCCeEEEEeCCHHHHHHHH-hcCCCeec
Confidence 5444 388899999999999965 69999999999997 99999999999999999999999999999999 99999888
Q ss_pred ecCCchhHHHHHHHHCCCCccEEEeCCChh-hHHHHHHhhhhCCEEEEEceec-cccCCCCccccchHHHH-hcceeeec
Q 019332 204 NYKEEPDLNEALKRYFPEGIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMIS-QYNLDRPEGVHNLMYLV-TKRVRMEG 280 (342)
Q Consensus 204 ~~~~~~~~~~~i~~~~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~~~~-~~~~~~~~ 280 (342)
. +. + .++ .++|++|||+|+. .+..++++|+++|+++.+|... .. ....+...++ .+++++.+
T Consensus 226 -~-~~-~---~~~----~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~~i~g 290 (348)
T 3two_A 226 -T-DP-K---QCK----EELDFIISTIPTHYDLKDYLKLLTYNGDLALVGLPPVEV-----APVLSVFDFIHLGNRKVYG 290 (348)
T ss_dssp -S-SG-G---GCC----SCEEEEEECCCSCCCHHHHHTTEEEEEEEEECCCCCGGG-----CCEEEHHHHHHTCSCEEEE
T ss_pred -C-CH-H---HHh----cCCCEEEECCCcHHHHHHHHHHHhcCCEEEEECCCCCCC-----cccCCHHHHHhhCCeEEEE
Confidence 3 32 2 111 1699999999995 9999999999999999999765 32 1124455666 89999998
Q ss_pred ceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecCC
Q 019332 281 FLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
+.... .+.++++++++.+|.+++.+ .+|+++++++|++.+.+++..||+|++++++
T Consensus 291 ~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvVi~~~~~ 346 (348)
T 3two_A 291 SLIGG-----IKETQEMVDFSIKHNIYPEI-DLILGKDIDTAYHNLTHGKAKFRYVIDMKKS 346 (348)
T ss_dssp CCSCC-----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCCSEEEEEGGGC
T ss_pred EecCC-----HHHHHHHHHHHHhCCCCceE-EEEEHHHHHHHHHHHHcCCCceEEEEecCCc
Confidence 87655 56789999999999999865 5889999999999999999999999998754
|
| >3pi7_A NADH oxidoreductase; groes-like fold, NAD(P)-binding rossmann fold, structural GE joint center for structural genomics, JCSG; HET: MSE; 1.71A {Mesorhizobium loti} | Back alignment and structure |
|---|
Probab=100.00 E-value=4.4e-53 Score=380.66 Aligned_cols=321 Identities=19% Similarity=0.212 Sum_probs=266.9
Q ss_pred CCccccccEEEEe--cccCCCCCCCceEEEEe-------eccccCCCCCCcEEEEEEeeecCcccccccccCCC-Ccccc
Q 019332 1 MPEMVRNKQVILK--DYVSGFPKETDMYMTES-------SIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVES 70 (342)
Q Consensus 1 m~~~~~~~a~~~~--~~~~g~p~~~~~~~~~~-------~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p 70 (342)
|+++.+|||+++. ++ +++ ++.+++++. ++|.| .++++||+|||+++|||++|++.+.|.++ ...+|
T Consensus 5 m~~p~~mka~~~~~~~~--~~~-~~~l~~~~~~~~~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~p 80 (349)
T 3pi7_A 5 MTIPSEMKALLLVGDGY--TKT-PSGSALEAMEPYLEQGRIAVP-APGPSQVLIKVNLASINPSDVAFIKGQYGQPRVKG 80 (349)
T ss_dssp CCCCSEEEEEEECSCBS--CSS-CCCSCCCCSTTTEEEEEEECC-CCCTTEEEEEEEEEECCHHHHHHHTTCSSSCBCTT
T ss_pred CCCchhheEEEEEcccc--CCC-cccceEEEeecccccccCCCC-CCCCCeEEEEEEEecCCHHHHHHhcccCCCCCCCC
Confidence 5666789999999 55 322 144566543 12555 45999999999999999999999998763 34579
Q ss_pred CCCCCcccccEEEEEecCCC-CCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHh
Q 019332 71 FKPGMPISGYGVAKVLDSEN-PEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAG 143 (342)
Q Consensus 71 ~~~G~e~~G~g~v~~vG~~v-~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~a 143 (342)
.++|||++| +|+++|++| ++|++||+|++. |+|+||++++++.++++ |+++++. ++|++++.++|||++
T Consensus 81 ~v~G~E~~G--~V~~vG~~v~~~~~vGdrV~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~ 156 (349)
T 3pi7_A 81 RPAGFEGVG--TIVAGGDEPYAKSLVGKRVAFATGLSNWGSWAEYAVAEAAACIPL-LDTVRDE-DGAAMIVNPLTAIAM 156 (349)
T ss_dssp SBCCSEEEE--EEEEECSSHHHHHHTTCEEEEECTTSSCCSSBSEEEEEGGGEEEC-CTTCCC---GGGSSHHHHHHHHH
T ss_pred CCccceEEE--EEEEECCCccCCCCCCCEEEEeccCCCCccceeeEeechHHeEEC-CCCCCHH-HHhhccccHHHHHHH
Confidence 999999776 999999999 999999999975 79999999999999999 9995544 388889999999976
Q ss_pred hhhhcCCCCC-CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-
Q 019332 144 FYEVCSPKQG-ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE- 221 (342)
Q Consensus 144 l~~~~~~~~~-~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~- 221 (342)
+ +.++ +++ ++|||+||+|++|++++|+|+..|++|++++++++|+++++ ++|++.++|+++. ++.+.+++.+++
T Consensus 157 ~-~~~~-~~g~~~vli~gg~g~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~-~~~~~v~~~~~~~ 232 (349)
T 3pi7_A 157 F-DIVK-QEGEKAFVMTAGASQLCKLIIGLAKEEGFRPIVTVRRDEQIALLK-DIGAAHVLNEKAP-DFEATLREVMKAE 232 (349)
T ss_dssp H-HHHH-HHCCSEEEESSTTSHHHHHHHHHHHHHTCEEEEEESCGGGHHHHH-HHTCSEEEETTST-THHHHHHHHHHHH
T ss_pred H-HHHh-hCCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCCEEEECCcH-HHHHHHHHHhcCC
Confidence 6 4455 666 79999999999999999999999999999999999999999 9999999999987 999999999877
Q ss_pred CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccch-HHHHhcceeeecceecccc----cchHHHHHH
Q 019332 222 GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNL-MYLVTKRVRMEGFLVRDYY----HLYPKFLEM 296 (342)
Q Consensus 222 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~----~~~~~~~~~ 296 (342)
++|++|||+|+..+..++++++++|+++.+|...... ..... ..++.+++++.++....+. ....+.+++
T Consensus 233 g~D~vid~~g~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~ 307 (349)
T 3pi7_A 233 QPRIFLDAVTGPLASAIFNAMPKRARWIIYGRLDPDA-----TVIREPGQLIFQHKHIEGFWLSEWMRQFKERRGPAILE 307 (349)
T ss_dssp CCCEEEESSCHHHHHHHHHHSCTTCEEEECCCSCCSC-----CCCSCTHHHHHSCCEEEECCHHHHHHHTHHHHHHHHHH
T ss_pred CCcEEEECCCChhHHHHHhhhcCCCEEEEEeccCCCC-----CCCCchhhhhccccEEEEEEehhhhhhCcHHHHHHHHH
Confidence 8999999999988899999999999999999755431 22344 6778899999998765542 233567889
Q ss_pred HHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 297 IIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 297 ~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++++.+|.+++.+..+|+|+++++|++.+ +++..||+||++
T Consensus 308 ~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~-~~~~~gKvvl~p 349 (349)
T 3pi7_A 308 AQKRFSDGRWSTDVTAVVPLAEAIAWVPAE-LTKPNGKVFIRP 349 (349)
T ss_dssp C-CTTTTSSCCC-CCEEEEHHHHHHHHHHH-HTSSSSCEEEEC
T ss_pred HHHHHHcCCcccccceEEcHHHHHHHHHHH-hCCCCceEEEeC
Confidence 999999999999999999999999999954 455679999974
|
| >1gu7_A Enoyl-[acyl-carrier-protein] reductase [NADPH, B-specific] 1,mitochondrial; oxidoreductase, thioester reduction, fatty acids; 1.70A {Candida tropicalis} SCOP: b.35.1.2 c.2.1.1 PDB: 1guf_A* 1n9g_B* 1n9g_A* 1gyr_A 1h0k_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.3e-52 Score=377.26 Aligned_cols=321 Identities=17% Similarity=0.241 Sum_probs=265.0
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-cccc---------CCC
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVES---------FKP 73 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p---------~~~ 73 (342)
|++|||+++.++ |.|. +.+++++.+.|.| .++++||+|||.++|||++|++.+.|.++. ..+| .++
T Consensus 1 ~~~mka~~~~~~--g~~~-~~l~~~~~~~P~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~P~~~~~~~p~~i~ 76 (364)
T 1gu7_A 1 MITAQAVLYTQH--GEPK-DVLFTQSFEIDDD-NLAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC 76 (364)
T ss_dssp CEEEEEEEESSC--SCHH-HHCEEEEEEECTT-SCCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred CceEEEEEeccC--CCch-heeEEeeccCCCC-CCCCCeEEEEEEeccCCHHHHHHhcCCCCCCCCCCccccccCccccc
Confidence 467899999998 7541 2367776555533 134999999999999999999999886532 2346 899
Q ss_pred CCcccccEEEEEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCC-----------CCCccchhhccCCchh
Q 019332 74 GMPISGYGVAKVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHT-----------DVPLSYYTGILGMPGM 138 (342)
Q Consensus 74 G~e~~G~g~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~-----------~~~~~~~~a~l~~~~~ 138 (342)
|||++| +|+++|++|++|++||+|++. |+|+||++++++.++++ |+ ++++. ++|+++++++
T Consensus 77 G~E~~G--~V~~vG~~v~~~~vGdrV~~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~~~~~~~~~~~~-~aa~l~~~~~ 152 (364)
T 1gu7_A 77 GNEGLF--EVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL-PNPAQSKANGKPNGLTIN-QGATISVNPL 152 (364)
T ss_dssp CSCCEE--EEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEE-CCHHHHHHTTCSCCCCHH-HHHTCTTHHH
T ss_pred CceeEE--EEEEeCCCCCcCCCCCEEEecCCCCCcchheEecCHHHeEEc-CCccccccccccCCCCHH-HHhhccccHH
Confidence 999776 999999999999999999976 89999999999999999 88 74443 3888888999
Q ss_pred hHHHhhhhhcCCCCC-CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh----HHHHHHHcCCCeeEecCC---chh
Q 019332 139 TAYAGFYEVCSPKQG-ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK----IDLLKNKFGFDEAFNYKE---EPD 210 (342)
Q Consensus 139 ta~~al~~~~~~~~~-~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~----~~~~~~~~g~~~v~~~~~---~~~ 210 (342)
|||+++.+.+++++| ++|||+|++|++|++++|+|+..|++|++++++.++ +++++ ++|+++++|+++ . +
T Consensus 153 ta~~~l~~~~~~~~g~~~VlV~Ga~G~vG~~aiqlak~~Ga~vi~~~~~~~~~~~~~~~~~-~lGa~~vi~~~~~~~~-~ 230 (364)
T 1gu7_A 153 TAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVITEDQNNSR-E 230 (364)
T ss_dssp HHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEEEHHHHHCG-G
T ss_pred HHHHHHHHhhccCCCCcEEEECCCCcHHHHHHHHHHHHCCCEEEEEecCccccHHHHHHHH-hcCCeEEEecCccchH-H
Confidence 999999777799999 999999999999999999999999999999876654 57777 999999999875 5 7
Q ss_pred HHHHHHHHC--CC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-
Q 019332 211 LNEALKRYF--PE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY- 286 (342)
Q Consensus 211 ~~~~i~~~~--~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (342)
+.+.+++.+ ++ ++|++|||+|+.....++++++++|+++.+|...+. ........++.+++++.++....+
T Consensus 231 ~~~~i~~~t~~~~~g~Dvvid~~G~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~ 305 (364)
T 1gu7_A 231 FGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTSAGFWVTELL 305 (364)
T ss_dssp GHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEEEECCHHHHH
T ss_pred HHHHHHHHhhccCCCceEEEECCCchhHHHHHHHhccCCEEEEecCCCCC-----CcccCHHHHhhcCcEEEEEchhHhc
Confidence 888898887 44 899999999996666899999999999999875432 122344566778999988765443
Q ss_pred ---ccchHHHHHHHHHHHHcCCceeeeeeeeccc---cHHHHHHHHHcCCccceEEEEe
Q 019332 287 ---YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLE---SAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~---~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+....+.++++++++.+|.+++.+..+++++ ++.+|++.+.+++..||+|+++
T Consensus 306 ~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 364 (364)
T 1gu7_A 306 KNNKELKTSTLNQIIAWYEEGKLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 364 (364)
T ss_dssp TTCHHHHHHHHHHHHHHHHHTCCCCCCCEEEECCSSSCHHHHHHHHHHTGGGSCEEEEC
T ss_pred ccCHHHHHHHHHHHHHHHHcCCcccccceEEecCchhhHHHHHHHHHhCCCCceEEEeC
Confidence 1223467899999999999998877777765 9999999999988889999975
|
| >1qor_A Quinone oxidoreductase; HET: NAP; 2.20A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=367.84 Aligned_cols=315 Identities=19% Similarity=0.183 Sum_probs=267.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ |.| +.+++++ .|.| .++++||+|||.++|||++|++.+.|.++...+|.++|||++| +|+++
T Consensus 2 Mka~~~~~~--g~~--~~l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~G~E~~G--~V~~v 72 (327)
T 1qor_A 2 ATRIEFHKH--GGP--EVLQAVE--FTPA-DPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAG--IVSKV 72 (327)
T ss_dssp CEEEEBSSC--CSG--GGCEEEE--CCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEE--EEEEE
T ss_pred cEEEEEcCC--CCh--hheEEec--cCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCCCceeEE--EEEEE
Confidence 699999988 766 4566665 5555 4589999999999999999999988866444578999999776 99999
Q ss_pred cCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 87 DSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
|++|++|++||||... |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+||+
T Consensus 73 G~~v~~~~~GdrV~~~g~~~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~g~~vlV~Ga~ 150 (327)
T 1qor_A 73 GSGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAIL-PAAISFE-QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAA 150 (327)
T ss_dssp CTTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEEC-CTTSCHH-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTT
T ss_pred CCCCCCCCCCCEEEECCCCCceeeeEEEecHHHcEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhCCCCCCEEEEECCC
Confidence 9999999999999654 89999999999999999 9994443 2778999999999999777899999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+.+.+.+ ++|++|||+|...+..++++
T Consensus 151 ggiG~~~~~~a~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~~~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~ 228 (327)
T 1qor_A 151 GGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE-DLVERLKEITGGKKVRVVYDSVGRDTWERSLDC 228 (327)
T ss_dssp BHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS-CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHT
T ss_pred CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HcCCCEEEECCCc-cHHHHHHHHhCCCCceEEEECCchHHHHHHHHH
Confidence 99999999999999999999999999999998 8999999999887 888899888876 89999999999899999999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhc-ceeeecceeccc---ccchHHHHHHHHHHHHcCCceeeee--eeec
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTK-RVRMEGFLVRDY---YHLYPKFLEMIIPHIKEGKIVYVED--MAEG 315 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~~~~~--~~~~ 315 (342)
++++|+++.+|...+. ........++.+ ++++.+.....+ ++...+.++++++++.+|.+++.+. .+|+
T Consensus 229 l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~~~ 303 (327)
T 1qor_A 229 LQRRGLMVSFGNSSGA-----VTGVNLGILNQKGSLYVTRPSLQGYITTREELTEASNELFSLIASGVIKVDVAEQQKYP 303 (327)
T ss_dssp EEEEEEEEECCCTTCC-----CCCBCTHHHHHTTSCEEECCCHHHHCCSHHHHHHHHHHHHHHHHTTSSCCCCCGGGEEE
T ss_pred hcCCCEEEEEecCCCC-----CCccCHHHHhhccceEEEccchhhhcCCHHHHHHHHHHHHHHHHCCCcccccccCcEEc
Confidence 9999999999975542 112344455566 677665443222 2223567899999999999999888 8899
Q ss_pred cccHHHHHHHHHcCCccceEEEEe
Q 019332 316 LESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 316 l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
|+++++|++.+.+++..||+|+++
T Consensus 304 l~~~~~A~~~~~~~~~~gKvvl~~ 327 (327)
T 1qor_A 304 LKDAQRAHEILESRATQGSSLLIP 327 (327)
T ss_dssp GGGHHHHHHHHHTTCCCBCCEEEC
T ss_pred HHHHHHHHHHHHhCCCCceEEEeC
Confidence 999999999999988889999864
|
| >1h2b_A Alcohol dehydrogenase; oxidoreductase, archaea, hyperthermophIle, zinc; HET: OCA NAJ; 1.62A {Aeropyrum pernix} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-51 Score=371.93 Aligned_cols=305 Identities=18% Similarity=0.247 Sum_probs=259.1
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCccccc
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGY 80 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~ 80 (342)
+++|||+++.++ |.+ +++++ +|.|..++++||+|||.++|||++|++.+.|.++ ...+|.++|||++|
T Consensus 13 ~~~mka~~~~~~--g~~----l~~~~--~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G- 83 (359)
T 1h2b_A 13 VERLKAARLHEY--NKP----LRIED--VDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG- 83 (359)
T ss_dssp ----CEEEESST--TSC----CEEEC--CCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEE-
T ss_pred hhhceEEEEecC--CCC----cEEEE--ccCCCCCCCCEEEEEEEEEEecccchHHHhCCCccccCCCCCeecCcCceE-
Confidence 367899999988 654 56655 5556315899999999999999999999988653 23578999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchh
Q 019332 81 GVAKVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYT 130 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~ 130 (342)
+|+++|++|++|++||||+++ |+|+||++++++.++++ |+++++. ++
T Consensus 84 -~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~a 160 (359)
T 1h2b_A 84 -YIEEVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKL-PKDISRE-KL 160 (359)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEEC-CTTCCHH-HH
T ss_pred -EEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCCCccccccCCCCcccceEEechHhEEEC-CCCCCHH-HH
Confidence 999999999999999999753 78999999999999999 9994443 26
Q ss_pred h---ccCCchhhHHHhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEec
Q 019332 131 G---ILGMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNY 205 (342)
Q Consensus 131 a---~l~~~~~ta~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~ 205 (342)
| +++++++|||+++.+. +++++|++|||+|+ |++|++++|+|+.. |++|++++++++|+++++ ++|+++++|+
T Consensus 161 a~~~~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~avqlak~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~ 238 (359)
T 1h2b_A 161 VEMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDA 238 (359)
T ss_dssp HHTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEET
T ss_pred hhccchhhhHHHHHHHHHhhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEeCCHHHHHHHH-HhCCCEEEec
Confidence 6 7888899999999765 89999999999998 99999999999999 999999999999999999 9999999999
Q ss_pred CCchhHHHHHHHHCCC-CccEEEeCCChh---hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecc
Q 019332 206 KEEPDLNEALKRYFPE-GIDIYFENVGGK---MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGF 281 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~-~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
++. +.+.+++++++ ++|++||++|+. .+..++++ ++|+++.+|...+. ..+...++.+++++.++
T Consensus 239 ~~~--~~~~v~~~~~g~g~Dvvid~~G~~~~~~~~~~~~~--~~G~~v~~g~~~~~-------~~~~~~~~~~~~~i~g~ 307 (359)
T 1h2b_A 239 RRD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLG--RMGRLIIVGYGGEL-------RFPTIRVISSEVSFEGS 307 (359)
T ss_dssp TSC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEE--EEEEEEECCCSSCC-------CCCHHHHHHTTCEEEEC
T ss_pred cch--HHHHHHHHhCCCCCcEEEECCCCchHHHHHHHhhc--CCCEEEEEeCCCCC-------CCCHHHHHhCCcEEEEe
Confidence 873 77888888877 899999999995 78888877 99999999875431 23445677889999887
Q ss_pred eecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 282 LVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.... .+.++++++++.+|.+++.+ .+|+|+++++|++.+.+++..||+|+++
T Consensus 308 ~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 359 (359)
T 1h2b_A 308 LVGN-----YVELHELVTLALQGKVRVEV-DIHKLDEINDVLERLEKGEVLGRAVLIP 359 (359)
T ss_dssp CSCC-----HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEEC
T ss_pred cCCC-----HHHHHHHHHHHHcCCCcceE-EEEeHHHHHHHHHHHHcCCCceEEEeeC
Confidence 6544 56789999999999999988 8899999999999999998889999974
|
| >1p0f_A NADP-dependent alcohol dehydrogenase; ADH topology, NADP(H)-dependent, oxidoreductase; HET: NAP; 1.80A {Rana perezi} SCOP: b.35.1.2 c.2.1.1 PDB: 1p0c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-51 Score=369.14 Aligned_cols=309 Identities=18% Similarity=0.191 Sum_probs=260.2
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|++|||+++.++ +.+ +++++.+.| .++++||||||.++|||++|++.+.|.++ ..+|.++|||++| +|
T Consensus 7 p~~mka~~~~~~--g~~----l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~P~v~GhE~~G--~V 74 (373)
T 1p0f_A 7 DITCKAAVAWEP--HKP----LSLETITVA---PPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVG--VV 74 (373)
T ss_dssp CEEEEEEEBSST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEE--EE
T ss_pred cceeEEEEEEcC--CCC----eeEEEeeCC---CCCCCeEEEEEeEEeecchhHHHhcCCCC-CCCCcccCcCceE--EE
Confidence 578999999988 655 677665554 45899999999999999999999888654 4578999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeec
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVT 112 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~ 112 (342)
+++|++|++|++||||++. |+|+||++++
T Consensus 75 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~ 154 (373)
T 1p0f_A 75 ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 154 (373)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred EEECCCCCccCCCCEEEECCCCCCCCChhhcCCCcCcCcCCCcccccccccCCccccccCCcccccccCCccceeEEEEc
Confidence 9999999999999999853 7899999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHH
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKID 191 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~ 191 (342)
++.++++ |+++ ++++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++
T Consensus 155 ~~~~~~i-P~~l--~~~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 230 (373)
T 1p0f_A 155 DIAVAKI-DPKA--PLESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFP 230 (373)
T ss_dssp TTSEEEE-CTTC--CGGGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred hhhEEEC-CCCC--ChhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEECCCHHHHH
Confidence 9999999 9994 44466778899999999977889999999999996 9999999999999999 8999999999999
Q ss_pred HHHHHcCCCeeEecCC--chhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccc
Q 019332 192 LLKNKFGFDEAFNYKE--EPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHN 267 (342)
Q Consensus 192 ~~~~~~g~~~v~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~ 267 (342)
+++ ++|+++++|+++ . ++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... ......
T Consensus 231 ~a~-~lGa~~vi~~~~~~~-~~~~~i~~~t~gg~Dvvid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~ 304 (373)
T 1p0f_A 231 KAI-ELGATECLNPKDYDK-PIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLD 304 (373)
T ss_dssp HHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEEC
T ss_pred HHH-HcCCcEEEecccccc-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHHhcCCCEEEEEccCCCC----CccccC
Confidence 999 999999999874 4 68899999887799999999998 7889999999999 999999975431 011233
Q ss_pred hHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 268 LMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
...++.++ ++.++....+. .+.++++++++.+|.+++ .+..+|+|+++++|++.+.+++. +|+||++
T Consensus 305 ~~~~~~~~-~i~g~~~~~~~---~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 1p0f_A 305 PLLLLTGR-SLKGSVFGGFK---GEEVSRLVDDYMKKKINVNFLVSTKLTLDQINKAFELLSSGQG-VRSIMIY 373 (373)
T ss_dssp THHHHTTC-EEEECSGGGCC---GGGHHHHHHHHHTTSSCGGGGEEEEECGGGHHHHHHHTTTSSC-SEEEEEC
T ss_pred HHHhccCc-eEEeeccCCcC---HHHHHHHHHHHHcCCCCchheEEEEeeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 44555666 88776543321 256888999999999874 56778899999999999988764 7999874
|
| >2j3h_A NADP-dependent oxidoreductase P1; double bond reductase (AT5G16970), APO form; 2.5A {Arabidopsis thaliana} PDB: 2j3i_A* 2j3j_A* 2j3k_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1e-50 Score=364.96 Aligned_cols=335 Identities=68% Similarity=1.194 Sum_probs=272.3
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC----ccccCCCCCcccc
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS----YVESFKPGMPISG 79 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~----~~~p~~~G~e~~G 79 (342)
+++||++++..+..+.|+..++++++.++|.|.+++++||||||.++|+|+.|. ...|.+.. ..+|.++|||++|
T Consensus 2 ~~~mka~~m~a~~~~~p~~~~l~~~~~~~~~P~~~~~~eVlVkv~a~g~~~~~~-~~~g~~~~~~~~~~~p~v~G~e~~G 80 (345)
T 2j3h_A 2 TATNKQVILKDYVSGFPTESDFDFTTTTVELRVPEGTNSVLVKNLYLSCDPYMR-IRMGKPDPSTAALAQAYTPGQPIQG 80 (345)
T ss_dssp EEEEEEEEECSCBSSSCCGGGEEEEEEEEECCSCSSSSCEEEEECEEECCTTHH-HHHBC---------CCCCTTSBCEE
T ss_pred CccceEEEEecCCCCCCCccceeEEEeecCCCCCCCCCEEEEEEEEecCCHHHH-hhcccCCCCccccCCCcCCCCeeec
Confidence 457899999998666664116888743455554368999999999999999885 33443311 2468999999877
Q ss_pred cEEEEE--ecCCCCCCCCCCEEEeccccceeEeecCCc--ceeecCC-CCCccchhhccCCchhhHHHhhhhhcCCCCCC
Q 019332 80 YGVAKV--LDSENPEFKKGDLVWGMTGWEEYSLVTAPQ--LFKIQHT-DVPLSYYTGILGMPGMTAYAGFYEVCSPKQGE 154 (342)
Q Consensus 80 ~g~v~~--vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~--~~~i~p~-~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~ 154 (342)
++.+ ||+++++|++||||+++|+|+||++++.+. ++++ |+ ++++++++|+++++++|||+++.+.+++++|+
T Consensus 81 --~~~~GvV~~~v~~~~vGdrV~~~g~~aey~~v~~~~~~~~~i-p~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~g~ 157 (345)
T 2j3h_A 81 --YGVSRIIESGHPDYKKGDLLWGIVAWEEYSVITPMTHAHFKI-QHTDVPLSYYTGLLGMPGMTAYAGFYEVCSPKEGE 157 (345)
T ss_dssp --EEEEEEEEECSTTCCTTCEEEEEEESBSEEEECCCTTTCEEE-CCCSSCTTGGGTTTSHHHHHHHHHHHTTSCCCTTC
T ss_pred --ceEEEEEecCCCCCCCCCEEEeecCceeEEEecccccceeec-CCCCCCHHHHHHhccccHHHHHHHHHHHhCCCCCC
Confidence 6666 999999999999999999999999999877 9999 75 54566567889999999999997778999999
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|||+|++|++|++++|+++..|++|+++++++++++.+++++|++.++|+++..++.+.+++.+++++|++|||+|+..
T Consensus 158 ~vlI~Ga~g~iG~~~~~~a~~~G~~V~~~~~~~~~~~~~~~~~g~~~~~d~~~~~~~~~~~~~~~~~~~d~vi~~~g~~~ 237 (345)
T 2j3h_A 158 TVYVSAASGAVGQLVGQLAKMMGCYVVGSAGSKEKVDLLKTKFGFDDAFNYKEESDLTAALKRCFPNGIDIYFENVGGKM 237 (345)
T ss_dssp EEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTSCCSEEEETTSCSCSHHHHHHHCTTCEEEEEESSCHHH
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEecCCHHHHHHHHHHHhCCCCcEEEECCCHHH
Confidence 99999999999999999999999999999999999998874699998899875326777888877558999999999988
Q ss_pred HHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeee
Q 019332 235 LDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAE 314 (342)
Q Consensus 235 ~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~ 314 (342)
+..++++++++|+++.+|...+.+........+...++.+++++.++....+.....+.++++++++.+|.+++.+..+|
T Consensus 238 ~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g~i~~~~~~~~ 317 (345)
T 2j3h_A 238 LDAVLVNMNMHGRIAVCGMISQYNLENQEGVHNLSNIIYKRNRIQGFVVSDFYDKYSKFLEFVLPHIREGKITYVEDVAD 317 (345)
T ss_dssp HHHHHTTEEEEEEEEECCCGGGTTCSSCCCBSCTTHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTTSSCCCEEEEE
T ss_pred HHHHHHHHhcCCEEEEEccccccccCCccccccHHHHhhhceeeceeeehhhhhhHHHHHHHHHHHHHCCCCcCcccccC
Confidence 99999999999999999976542111111223345677788888887655544445677999999999999998888789
Q ss_pred ccccHHHHHHHHHcCCccceEEEEecCC
Q 019332 315 GLESAPATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 315 ~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
+|+++++|++.+.+++..||+|+.+++|
T Consensus 318 ~l~~~~~A~~~~~~~~~~gKvvv~~~~~ 345 (345)
T 2j3h_A 318 GLEKAPEALVGLFHGKNVGKQVVVVARE 345 (345)
T ss_dssp SGGGSHHHHHHHHTTCCSSEEEEESSCC
T ss_pred CHHHHHHHHHHHHcCCCceEEEEEeCCC
Confidence 9999999999999999899999998765
|
| >2eih_A Alcohol dehydrogenase; zinc ION binding protein, structural genomics, NPPSFA, natio project on protein structural and functional analyses; 2.30A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-51 Score=369.17 Aligned_cols=310 Identities=23% Similarity=0.296 Sum_probs=267.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ |.| +.+++++ +|.| .++++||||||.++|||++|++.+.|.++. ..+|.++|||++| +|++
T Consensus 1 Mka~~~~~~--g~~--~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G--~V~~ 71 (343)
T 2eih_A 1 MRAVVMRAR--GGP--EVLEVAD--LPVP-EPGPKEVRVRLKAAALNHLDVWVRKGVASPKLPLPHVLGADGSG--VVDA 71 (343)
T ss_dssp CEEEEECSS--SSG--GGEEEEE--CCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSSTTCCSSEECCSEEEE--EEEE
T ss_pred CeEEEEecC--CCC--ceEEEEe--cCCC-CCCCCEEEEEEEEEEeCHHHHHHhcCCCCCCCCCCcccccceEE--EEEE
Confidence 589999988 766 3466655 5555 458999999999999999999998886532 3568999999776 9999
Q ss_pred ecCCCCCCCCCCEEE-------e--------------------c---cccceeEeecCCcceeecCCCCCccchhhccCC
Q 019332 86 LDSENPEFKKGDLVW-------G--------------------M---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGM 135 (342)
Q Consensus 86 vG~~v~~~~vGd~V~-------~--------------------~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~ 135 (342)
+|++|++|++||||+ + + |+|+||++++++.++++ |++++.. ++|+++.
T Consensus 72 vG~~v~~~~vGdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~~ 149 (343)
T 2eih_A 72 VGPGVEGFAPGDEVVINPGLSCGRCERCLAGEDNLCPRYQILGEHRHGTYAEYVVLPEANLAPK-PKNLSFE-EAAAIPL 149 (343)
T ss_dssp ECSSCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTTSSCCSSBSEEEEEGGGEEEC-CTTSCHH-HHHHSHH
T ss_pred ECCCCCCCCCCCEEEECCCCCcccchhhccCcccccccccccCcCCCccceeEEEeChHHeEEC-CCCCCHH-HHhhchh
Confidence 999999999999999 4 3 78999999999999999 9994433 2777999
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+++|||+++.+.++++++++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+++. ++.+.+
T Consensus 150 ~~~ta~~al~~~~~~~~g~~vlV~Gasg~iG~~~~~~a~~~G~~Vi~~~~~~~~~~~~~-~~ga~~~~d~~~~-~~~~~~ 227 (343)
T 2eih_A 150 TFLTAWQMVVDKLGVRPGDDVLVMAAGSGVSVAAIQIAKLFGARVIATAGSEDKLRRAK-ALGADETVNYTHP-DWPKEV 227 (343)
T ss_dssp HHHHHHHHHTTTSCCCTTCEEEECSTTSTTHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HHTCSEEEETTST-THHHHH
T ss_pred hHHHHHHHHHHhcCCCCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEcCCcc-cHHHHH
Confidence 99999999977679999999999999999999999999999999999999999999998 8999999999887 888889
Q ss_pred HHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHH
Q 019332 216 KRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFL 294 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 294 (342)
++.+++ ++|++||++|+..+..++++++++|+++.+|...+. ....+...++.+++++.++.... .+.+
T Consensus 228 ~~~~~~~~~d~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~-----~~~~ 297 (343)
T 2eih_A 228 RRLTGGKGADKVVDHTGALYFEGVIKATANGGRIAIAGASSGY-----EGTLPFAHVFYRQLSILGSTMAS-----KSRL 297 (343)
T ss_dssp HHHTTTTCEEEEEESSCSSSHHHHHHHEEEEEEEEESSCCCSC-----CCCCCTTHHHHTTCEEEECCSCC-----GGGH
T ss_pred HHHhCCCCceEEEECCCHHHHHHHHHhhccCCEEEEEecCCCC-----cCccCHHHHHhCCcEEEEecCcc-----HHHH
Confidence 988876 899999999988899999999999999999976542 11233455678899988865332 5668
Q ss_pred HHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 295 EMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 295 ~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++++++.+|.+++.+..+|+|+++++|++.+.+++..||+|+++
T Consensus 298 ~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvv~~ 342 (343)
T 2eih_A 298 FPILRFVEEGKLKPVVGQVLPLEAAAEGHRLLEERRVFGKVVLQV 342 (343)
T ss_dssp HHHHHHHHHTSSCCCEEEEEEGGGHHHHHHHHHTTCSSSEEEEEC
T ss_pred HHHHHHHHcCCCCCceeEEeeHHHHHHHHHHHHcCCCceEEEEec
Confidence 899999999999998988999999999999999988889999975
|
| >1e3i_A Alcohol dehydrogenase, class II; HET: NAD; 2.08A {Mus musculus} SCOP: b.35.1.2 c.2.1.1 PDB: 1e3e_A* 1e3l_A* 3cos_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.3e-50 Score=368.10 Aligned_cols=310 Identities=16% Similarity=0.226 Sum_probs=261.7
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
.|++|||+++.++ +.+ +++++.+.| +++++||+|||.++|||++|++.+.|. +...+|.++|||++| +
T Consensus 5 ~p~~mka~~~~~~--g~~----l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~g~-~~~~~P~v~GhE~~G--~ 72 (376)
T 1e3i_A 5 KVIKCKAAIAWKT--GSP----LCIEEIEVS---PPKACEVRIQVIATCVCPTDINATDPK-KKALFPVVLGHECAG--I 72 (376)
T ss_dssp SCEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHTTCTT-SCCCSSBCCCCEEEE--E
T ss_pred CChheeEEEEecC--CCC----eEEEEeeCC---CCCCCeEEEEEeEEeEchhhHHHhcCC-CCCCCCcccCccccE--E
Confidence 3578999999988 655 577665554 458999999999999999999998885 334578999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec-------------------------------------------------------cccce
Q 019332 83 AKVLDSENPEFKKGDLVWGM-------------------------------------------------------TGWEE 107 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~-------------------------------------------------------g~~~~ 107 (342)
|+++|++|++|++||||++. |+|+|
T Consensus 73 V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~ae 152 (376)
T 1e3i_A 73 VESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQ 152 (376)
T ss_dssp EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBS
T ss_pred EEEECCCCccCCCCCEEEECCcCCCCCCccccCCCcccCcCcCccccccccccccccCccccccCCcccccccCCcccee
Confidence 99999999999999999852 78999
Q ss_pred eEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC
Q 019332 108 YSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS 186 (342)
Q Consensus 108 ~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s 186 (342)
|++++++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++
T Consensus 153 y~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~ 229 (376)
T 1e3i_A 153 YTVVSEANLARV-DDEANLE-RVCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDIN 229 (376)
T ss_dssp EEEEEGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSC
T ss_pred EEEeccccEEEC-CCCCCHH-HhhhhccHHHHHHHHHHHhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCC
Confidence 999999999999 9994443 378888999999999977889999999999996 9999999999999999 89999999
Q ss_pred hhhHHHHHHHcCCCeeEecCC--chhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCC
Q 019332 187 KDKIDLLKNKFGFDEAFNYKE--EPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRP 262 (342)
Q Consensus 187 ~~~~~~~~~~~g~~~v~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~ 262 (342)
++|+++++ ++|+++++|+++ . ++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|....
T Consensus 230 ~~~~~~a~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~Dvvid~~G~~~~~~~~~~~l~~~~G~iv~~G~~~~------ 301 (376)
T 1e3i_A 230 GEKFPKAK-ALGATDCLNPRELDK-PVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVD------ 301 (376)
T ss_dssp GGGHHHHH-HTTCSEEECGGGCSS-CHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSS------
T ss_pred HHHHHHHH-HhCCcEEEccccccc-hHHHHHHHHhCCCccEEEECCCCHHHHHHHHHHhhcCCCEEEEECCCCC------
Confidence 99999998 999999999874 4 68888988887789999999998 7889999999999 99999987321
Q ss_pred ccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 263 EGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 263 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
....+...++.++ ++.++....+ ...+.++++++++.+|++++ .+..+|+|+++++|++.+.+++ .+|+||++
T Consensus 302 ~~~~~~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~-~~Kvvi~~ 376 (376)
T 1e3i_A 302 EMTIPTVDVILGR-SINGTFFGGW--KSVDSVPNLVSDYKNKKFDLDLLVTHALPFESINDAIDLMKEGK-SIRTILTF 376 (376)
T ss_dssp EEEEEHHHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCGGGGEEEEEEGGGHHHHHHHHHTTC-CSEEEEEC
T ss_pred ccccCHHHhhccC-eEEEEecCCC--CcHHHHHHHHHHHHcCCCCcHHhEeeeecHHHHHHHHHHHhcCC-cceEEEeC
Confidence 1233445566677 8877654322 12567899999999999874 5677889999999999998877 47999874
|
| >2fzw_A Alcohol dehydrogenase class III CHI chain; S-nitrosoglutathione reductase, glutathione-dependent formaldehyde dehydrogenase, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 3qj5_A* 1mc5_A* 2fze_A* 1m6w_A* 1ma0_A* 1mp0_A* 1teh_A* 1m6h_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=368.14 Aligned_cols=312 Identities=21% Similarity=0.258 Sum_probs=263.1
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|++|||+++.++ +.+ +++++.+.| +++++||+|||.++|||++|++.+.|.++...+|.++|||++| +|
T Consensus 4 p~~mkA~~~~~~--~~~----l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G--~V 72 (373)
T 2fzw_A 4 VIKCKAAVAWEA--GKP----LSIEEIEVA---PPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAG--IV 72 (373)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEE--EE
T ss_pred ccceEEEEEecC--CCC----cEEEEeeCC---CCCCCEEEEEEEEEEEchhhHHHhcCCCCCCCCCccccccccE--EE
Confidence 578999999988 655 677765554 4589999999999999999999998865444678999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeec
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVT 112 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~ 112 (342)
+++|++|++|++||||++. |+|+||++++
T Consensus 73 ~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~ 152 (373)
T 2fzw_A 73 ESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVVA 152 (373)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEEE
T ss_pred EEECCCCCCCCCCCEEEECCCCCCCCChHHcCcCcccCCCcccccccccccCCcccccccccccccccCCccceeEEEEc
Confidence 9999999999999999853 7899999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHH
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKID 191 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~ 191 (342)
++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|++
T Consensus 153 ~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~avqla~~~Ga~~Vi~~~~~~~~~~ 229 (373)
T 2fzw_A 153 DISVAKI-DPLAPLD-KVCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFA 229 (373)
T ss_dssp GGGEEEC-CTTSCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHH
T ss_pred hhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHhhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 9999999 9994444 378888999999999977889999999999996 9999999999999999 8999999999999
Q ss_pred HHHHHcCCCeeEecCC--chhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccc
Q 019332 192 LLKNKFGFDEAFNYKE--EPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHN 267 (342)
Q Consensus 192 ~~~~~~g~~~v~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~ 267 (342)
+++ ++|+++++|+++ . ++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... ......
T Consensus 230 ~~~-~lGa~~vi~~~~~~~-~~~~~v~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~ 303 (373)
T 2fzw_A 230 RAK-EFGATECINPQDFSK-PIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAASG----EEIATR 303 (373)
T ss_dssp HHH-HHTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCTT----CCEEEC
T ss_pred HHH-HcCCceEeccccccc-cHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHhhccCCcEEEEEecCCCC----ceeeeC
Confidence 999 999999999874 4 68889999887789999999998 7889999999999 999999975431 011233
Q ss_pred hHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 268 LMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
...++.++ ++.++....+ ...+.++++++++.+|.+++ .+..+|+|+++++|++.+.+++. +|+||++
T Consensus 304 ~~~~~~~~-~i~g~~~~~~--~~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 373 (373)
T 2fzw_A 304 PFQLVTGR-TWKGTAFGGW--KSVESVPKLVSEYMSKKIKVDEFVTHNLSFDEINKAFELMHSGKS-IRTVVKI 373 (373)
T ss_dssp THHHHTTC-EEEECSGGGC--CHHHHHHHHHHHHHTTSSCSGGGEEEEEEGGGHHHHHHHHHHTCC-SEEEEEC
T ss_pred HHHHhcCC-EEEEeccCCC--CcHHHHHHHHHHHHcCCCCchheEeEEeeHHHHHHHHHHHhCCCc-ceEEEeC
Confidence 44556666 8877654332 12567899999999999884 56778899999999999988775 7999874
|
| >3jv7_A ADH-A; dehydrogenase, nucleotide binding, rossmann-fold, oxidoreduc; HET: NAD; 2.00A {Rhodococcus ruber} PDB: 2xaa_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-51 Score=367.75 Aligned_cols=303 Identities=19% Similarity=0.209 Sum_probs=262.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC--CccccCCCCCcccccEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--SYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--~~~~p~~~G~e~~G~g~v~ 84 (342)
|||++++++ |.| +++++ +|.| .++++||||||+++|||++|++.+.|.++ ...+|.++|||++| +|+
T Consensus 1 MkA~~~~~~--g~~----l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~e~~G--~V~ 69 (345)
T 3jv7_A 1 MKAVQYTEI--GSE----PVVVD--IPTP-TPGPGEILLKVTAAGLCHSDIFVMDMPAAQYAYGLPLTLGHEGVG--TVA 69 (345)
T ss_dssp CEEEEECST--TSC----CEEEE--CCCC-CCCTTCEEEEEEEEECCHHHHHHHHSCTTTCCSCSSEECCSEEEE--EEE
T ss_pred CeEEEEcCC--CCc----eEEEE--ecCC-CCCCCeEEEEEEEEeeCHHHHHHHcCCCCccCCCCCcccCcccEE--EEE
Confidence 699999999 766 57766 4555 45999999999999999999999988653 24578999999776 999
Q ss_pred EecCCCCCCCCCCEEEe-----------------------------------ccccceeEeec-CCcceeecCCCCCccc
Q 019332 85 VLDSENPEFKKGDLVWG-----------------------------------MTGWEEYSLVT-APQLFKIQHTDVPLSY 128 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~-----------------------------------~g~~~~~~~v~-~~~~~~i~p~~~~~~~ 128 (342)
++|++|++|++||+|++ .|+|+||++++ .+.++++ |+ ++..
T Consensus 70 ~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~~-p~-~~~~- 146 (345)
T 3jv7_A 70 ELGEGVTGFGVGDAVAVYGPWGCGACHACARGRENYCTRAADLGITPPGLGSPGSMAEYMIVDSARHLVPI-GD-LDPV- 146 (345)
T ss_dssp EECTTCCSCCTTCEEEECCSCCCSSSHHHHTTCGGGCSSHHHHTCCCBTTTBCCSSBSEEEESCGGGEEEC-TT-CCHH-
T ss_pred EECCCCCCCCCCCEEEEecCCCCCCChHHHCcCcCcCccccccccccCCcCCCceeeEEEEecchhceEeC-CC-CCHH-
Confidence 99999999999999986 27899999999 8889999 88 6555
Q ss_pred hhhccCCchhhHHHhhhh-hcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecC
Q 019332 129 YTGILGMPGMTAYAGFYE-VCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYK 206 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~-~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~ 206 (342)
++|+++++++|||+++.+ .+++++|++|||+|+ |++|++++|+|+.. +++|++++++++|+++++ ++|++.+++++
T Consensus 147 ~aa~l~~~~~ta~~~l~~~~~~~~~g~~vlv~Ga-G~vG~~a~qla~~~g~~~Vi~~~~~~~~~~~~~-~lGa~~~i~~~ 224 (345)
T 3jv7_A 147 AAAPLTDAGLTPYHAISRVLPLLGPGSTAVVIGV-GGLGHVGIQILRAVSAARVIAVDLDDDRLALAR-EVGADAAVKSG 224 (345)
T ss_dssp HHGGGGTTTHHHHHHHHTTGGGCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESCHHHHHHHH-HTTCSEEEECS
T ss_pred HhhhhhhhHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHHHHH-HcCCCEEEcCC
Confidence 388899999999999977 458999999999997 99999999999998 679999999999999999 99999999987
Q ss_pred CchhHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 207 EEPDLNEALKRYFPE-GIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 207 ~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
+ ++.+.+++.+++ ++|++|||+|+. .+..++++|+++|+++.+|...+.. ...+ ..++.+++++.++...
T Consensus 225 ~--~~~~~v~~~t~g~g~d~v~d~~G~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~-~~~~~~~~~i~g~~~~ 296 (345)
T 3jv7_A 225 A--GAADAIRELTGGQGATAVFDFVGAQSTIDTAQQVVAVDGHISVVGIHAGAH-----AKVG-FFMIPFGASVVTPYWG 296 (345)
T ss_dssp T--THHHHHHHHHGGGCEEEEEESSCCHHHHHHHHHHEEEEEEEEECSCCTTCC-----EEES-TTTSCTTCEEECCCSC
T ss_pred C--cHHHHHHHHhCCCCCeEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCCC-----CCcC-HHHHhCCCEEEEEecC
Confidence 6 788999999888 999999999995 8999999999999999999765421 1222 2667788998887665
Q ss_pred ccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
. .+.++++++++.+|.+++. ..+|+++++++|++.+.+++..||+||++
T Consensus 297 ~-----~~~~~~~~~l~~~g~l~~~-~~~~~l~~~~~A~~~~~~~~~~Gkvvv~p 345 (345)
T 3jv7_A 297 T-----RSELMEVVALARAGRLDIH-TETFTLDEGPAAYRRLREGSIRGRGVVVP 345 (345)
T ss_dssp C-----HHHHHHHHHHHHTTCCCCC-EEEECSTTHHHHHHHHHHTCCSSEEEECC
T ss_pred C-----HHHHHHHHHHHHcCCCceE-EEEEcHHHHHHHHHHHHcCCCceeEEeCC
Confidence 4 6789999999999999984 47889999999999999999999999864
|
| >4a2c_A Galactitol-1-phosphate 5-dehydrogenase; oxidoreductase, metal binding-site; 1.87A {Escherichia coli} | Back alignment and structure |
|---|
Probab=100.00 E-value=7.8e-51 Score=365.94 Aligned_cols=311 Identities=20% Similarity=0.184 Sum_probs=257.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ | .+++++ .|.|..++|+||||||.|+|||++|++.+.|..+ ..+|+++|||++| +|+++
T Consensus 1 MkAvv~~~~--g-----~l~v~e--~p~P~~~~~~eVlVkv~a~gi~~sD~~~~~g~~~-~~~P~i~G~E~~G--~V~~v 68 (346)
T 4a2c_A 1 MKSVVNDTD--G-----IVRVAE--SVIPEIKHQDEVRVKIASSGLCGSDLPRIFKNGA-HYYPITLGHEFSG--YIDAV 68 (346)
T ss_dssp CEEEEECSS--S-----CEEEEE--CCCCCCCSTTEEEEEEEEEECCTTHHHHHHSSCS-SSSSBCCCCEEEE--EEEEE
T ss_pred CCEEEEecC--C-----CEEEEE--EeCCCCCCcCEEEEEEEEEEECHHHHHHHcCCCC-CCCCccccEEEEE--EEEEE
Confidence 699999988 4 246655 6666545799999999999999999988887643 4578999999776 99999
Q ss_pred cCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCc
Q 019332 87 DSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMP 136 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~ 136 (342)
|++|+++++||+|++. |+|+||++++++.++++ |+++++.. +|.+ .+
T Consensus 69 G~~V~~~~~GdrV~~~~~~~~g~c~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~l~~~~-aa~l-~~ 145 (346)
T 4a2c_A 69 GSGVDDLHPGDAVACVPLLPCFTCPECLKGFYSQCAKYDFIGSRRDGGFAEYIVVKRKNVFAL-PTDMPIED-GAFI-EP 145 (346)
T ss_dssp CTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEEEGGGEEEC-CTTSCGGG-GGGH-HH
T ss_pred CCCcccccCCCeEEeeeccCCCCcccccCCccccCCCcccccCCCCcccccccccchheEEEC-CCCCCHHH-HHhc-hH
Confidence 9999999999999862 78999999999999999 99944432 4443 34
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 137 GMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
..++++++ ...++++|++|||+|+ |++|++++|+|++.|+ .+++++++++|+++++ ++|+++++|+++. +..+.+
T Consensus 146 ~~~~~~~~-~~~~~~~g~~VlV~Ga-G~vG~~aiq~ak~~G~~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~-~~~~~~ 221 (346)
T 4a2c_A 146 ITVGLHAF-HLAQGCENKNVIIIGA-GTIGLLAIQCAVALGAKSVTAIDISSEKLALAK-SFGAMQTFNSSEM-SAPQMQ 221 (346)
T ss_dssp HHHHHHHH-HHTTCCTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEETTTS-CHHHHH
T ss_pred HHHHHHHH-HHhccCCCCEEEEECC-CCcchHHHHHHHHcCCcEEEEEechHHHHHHHH-HcCCeEEEeCCCC-CHHHHH
Confidence 44555554 6789999999999997 9999999999999999 5678888999999999 9999999999998 888888
Q ss_pred HHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHH
Q 019332 216 KRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293 (342)
Q Consensus 216 ~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
++++++ ++|+++|++|+ ..++.++++++++|+++.+|...+.. .........++.+++++.|++.........+.
T Consensus 222 ~~~~~~~g~d~v~d~~G~~~~~~~~~~~l~~~G~~v~~g~~~~~~---~~~~~~~~~~~~k~~~i~G~~~~~~~~~~~~~ 298 (346)
T 4a2c_A 222 SVLRELRFNQLILETAGVPQTVELAVEIAGPHAQLALVGTLHQDL---HLTSATFGKILRKELTVIGSWMNYSSPWPGQE 298 (346)
T ss_dssp HHHGGGCSSEEEEECSCSHHHHHHHHHHCCTTCEEEECCCCSSCE---EECHHHHHHHHHHTCEEEECCTTCCSSTTCHH
T ss_pred HhhcccCCcccccccccccchhhhhhheecCCeEEEEEeccCCCc---cccccCHHHHhhceeEEEEEeccccCcchHHH
Confidence 888877 89999999997 78899999999999999999765421 11223445677899999987654433333567
Q ss_pred HHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 294 LEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 294 ~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
++++++++.+|++++ .++.+|+|+++++|++.+.+++..||+||.+
T Consensus 299 ~~~~~~l~~~g~l~~~~lI~~~~~l~~~~~A~~~l~~~~~~GKvVl~P 346 (346)
T 4a2c_A 299 WETASRLLTERKLSLEPLIAHRGSFESFAQAVRDIARNAMPGKVLLIP 346 (346)
T ss_dssp HHHHHHHHHTTCSCCGGGEEEEECHHHHHHHHHHHTTSCCCSEEEECC
T ss_pred HHHHHHHHHcCCCCCCccEeEEEeHHHHHHHHHHHHcCCCceEEEEEC
Confidence 899999999998864 4777899999999999999999999999863
|
| >2zb4_A Prostaglandin reductase 2; rossmann fold, alternative splicing, cytoplasm, NADP, oxidoreductase; HET: NAP 5OP; 1.63A {Homo sapiens} PDB: 2zb7_A* 2zb8_A* 2w98_A* 2vna_A* 2w4q_A* 1vj1_A 2zb3_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=362.87 Aligned_cols=332 Identities=33% Similarity=0.544 Sum_probs=272.8
Q ss_pred ccccccEEEEe-ccc-CCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCccccccccc----CCC-CccccCCCCC
Q 019332 3 EMVRNKQVILK-DYV-SGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN----IKG-SYVESFKPGM 75 (342)
Q Consensus 3 ~~~~~~a~~~~-~~~-~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~----~~~-~~~~p~~~G~ 75 (342)
+|++|||+++. ++. .|.|.++++++++.+. |.+++++||+|||.++|||++|++.+.+ .+. ...+|.++||
T Consensus 5 ~~~~mka~v~~~~~~~~g~p~~~~l~~~~~~~--P~~~~~~eVlVkv~a~gi~~~D~~~~~~~~g~~~~~~~~~p~v~G~ 82 (357)
T 2zb4_A 5 AAMIVQRVVLNSRPGKNGNPVAENFRMEEVYL--PDNINEGQVQVRTLYLSVDPYMRCRMNEDTGTDYITPWQLSQVVDG 82 (357)
T ss_dssp -CCEEEEEEECCCCCTTSCCCGGGEEEEEEEC--CSCCCTTEEEEEEEEEECCTTHHHHTSSSCSSSSSCCCCBTSBCEE
T ss_pred ccccceEEEEeccCCCCCCCCcCceEEEeecC--CCCCCCCeEEEEEEEEecCHHHHhhccccccccccCCCCCCccccc
Confidence 45789999994 430 1445446677776544 5333899999999999999999877665 221 2356889999
Q ss_pred cccccEEEEEecCCCCCCCCCCEEEec-cccceeEeecCCcceeecCCCC---CccchhhccCCchhhHHHhhhhhcCCC
Q 019332 76 PISGYGVAKVLDSENPEFKKGDLVWGM-TGWEEYSLVTAPQLFKIQHTDV---PLSYYTGILGMPGMTAYAGFYEVCSPK 151 (342)
Q Consensus 76 e~~G~g~v~~vG~~v~~~~vGd~V~~~-g~~~~~~~v~~~~~~~i~p~~~---~~~~~~a~l~~~~~ta~~al~~~~~~~ 151 (342)
|++| +|++ ++|++|++||||++. |+|+||++++.+.++++ |+++ +.++++|+++.+++|||+++.+.++++
T Consensus 83 E~~G--~V~~--~~v~~~~vGdrV~~~~G~~aey~~v~~~~~~~i-P~~~~~~~~~~~~a~l~~~~~ta~~al~~~~~~~ 157 (357)
T 2zb4_A 83 GGIG--IIEE--SKHTNLTKGDFVTSFYWPWQTKVILDGNSLEKV-DPQLVDGHLSYFLGAIGMPGLTSLIGIQEKGHIT 157 (357)
T ss_dssp EEEE--EEEE--ECSTTCCTTCEEEEEEEESBSEEEEEGGGCEEC-CGGGGTTCGGGGGTTTSHHHHHHHHHHHHHSCCC
T ss_pred cEEE--EEEe--cCCCCCCCCCEEEecCCCcEEEEEEchHHceec-CcccccCchhHHHHhcccHHHHHHHHHHHhcCCC
Confidence 9776 8988 889999999999998 79999999999999999 9984 115557889999999999998789999
Q ss_pred CC--CEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~--~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
+| ++|||+|++|++|++++|+++..|+ +|+++++++++.+.+++++|++.++|+++. ++.+.+++.+.+++|++||
T Consensus 158 ~g~~~~vlI~GasggiG~~~~~~a~~~Ga~~Vi~~~~~~~~~~~~~~~~g~~~~~d~~~~-~~~~~~~~~~~~~~d~vi~ 236 (357)
T 2zb4_A 158 AGSNKTMVVSGAAGACGSVAGQIGHFLGCSRVVGICGTHEKCILLTSELGFDAAINYKKD-NVAEQLRESCPAGVDVYFD 236 (357)
T ss_dssp TTSCCEEEESSTTBHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHTSCCSEEEETTTS-CHHHHHHHHCTTCEEEEEE
T ss_pred CCCccEEEEECCCcHHHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHcCCceEEecCch-HHHHHHHHhcCCCCCEEEE
Confidence 99 9999999999999999999999999 999999999998988833999999999887 8888999888668999999
Q ss_pred CCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccc-c---chHHHHhcceeeecceecccccchHHHHHHHHHHHHcC
Q 019332 229 NVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGV-H---NLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEG 304 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g 304 (342)
|+|+..+..++++++++|+++.+|.........+... . ....++.+++++.++....+.+...+.++++++++.+|
T Consensus 237 ~~G~~~~~~~~~~l~~~G~iv~~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~l~~~g 316 (357)
T 2zb4_A 237 NVGGNISDTVISQMNENSHIILCGQISQYNKDVPYPPPLSPAIEAIQKERNITRERFLVLNYKDKFEPGILQLSQWFKEG 316 (357)
T ss_dssp SCCHHHHHHHHHTEEEEEEEEECCCGGGTTSCCCSSCCCCHHHHHHHHHHTCEEEECCGGGGGGGHHHHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhccCcEEEEECCccccccCccccccchhhhhhhhhcceeEEEEeehhhhhHHHHHHHHHHHHHHHcC
Confidence 9999889999999999999999998654211111000 0 02456778899988766544445567899999999999
Q ss_pred CceeeeeeeeccccHHHHHHHHHcCCccceEEEEecCC
Q 019332 305 KIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 305 ~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
.+++.+..+|+|+++++|++.+.+++..||+|++++++
T Consensus 317 ~l~~~~~~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~~ 354 (357)
T 2zb4_A 317 KLKIKETVINGLENMGAAFQSMMTGGNIGKQIVCISEE 354 (357)
T ss_dssp CCCCCEEEEECGGGHHHHHHHHHTTCCSBEEEEECCCC
T ss_pred CCcCccceecCHHHHHHHHHHHHcCCCCceEEEEEecc
Confidence 99998888899999999999999988889999998754
|
| >1cdo_A Alcohol dehydrogenase; oxidoreductase, oxidoreductase (CH-OH(D)-NAD(A)); HET: NAD; 2.05A {Gadus callarias} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=2e-50 Score=366.63 Aligned_cols=310 Identities=16% Similarity=0.201 Sum_probs=261.7
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCccccc-ccccCCCCccccCCCCCcccccEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRP-RMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~-~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
|++|||+++.++ +.+ +++++.+.| +++++||+|||.++|||++|++ .+.|.++ ..+|.++|||++| +
T Consensus 6 ~~~mka~~~~~~--~~~----l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~P~v~GhE~~G--~ 73 (374)
T 1cdo_A 6 VIKCKAAVAWEA--NKP----LVIEEIEVD---VPHANEIRIKIIATGVCHTDLYHLFEGKHK-DGFPVVLGHEGAG--I 73 (374)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHHTTCCT-TSCSEECCCCEEE--E
T ss_pred cceeEEEEEecC--CCC----eEEEEeeCC---CCCCCEEEEEEeEEeechhhHHHHhCCCCC-CCCCcccCccceE--E
Confidence 578999999988 655 577665554 4589999999999999999999 8887654 4578999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEee
Q 019332 83 AKVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLV 111 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v 111 (342)
|+++|++|++|++||||++. |+|+||+++
T Consensus 74 V~~vG~~V~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~G~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v 153 (374)
T 1cdo_A 74 VESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVV 153 (374)
T ss_dssp EEEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEE
T ss_pred EEEECCCCccCCCCCEEEeCCCCCCCCChhhcCCCcCcCCCcccccccccccCCccccccCCcccccccCCccceeEEEE
Confidence 99999999999999999853 789999999
Q ss_pred cCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhH
Q 019332 112 TAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKI 190 (342)
Q Consensus 112 ~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~ 190 (342)
+++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++++
T Consensus 154 ~~~~~~~~-P~~~~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~ 230 (374)
T 1cdo_A 154 NQIAVAKI-DPSAPLD-TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKF 230 (374)
T ss_dssp EGGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGH
T ss_pred chhheEEC-CCCCCHH-HHhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHH
Confidence 99999999 9995444 378888999999999977889999999999996 9999999999999999 899999999999
Q ss_pred HHHHHHcCCCeeEecCC--chhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCcccc
Q 019332 191 DLLKNKFGFDEAFNYKE--EPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVH 266 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~ 266 (342)
++++ ++|+++++|+++ . ++.+.+++.+++++|++||++|+ ..+..++++++++ |+++.+|..... ....
T Consensus 231 ~~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~-----~~~~ 303 (374)
T 1cdo_A 231 EKAK-VFGATDFVNPNDHSE-PISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDLH-----DVAT 303 (374)
T ss_dssp HHHH-HTTCCEEECGGGCSS-CHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSSS-----CEEE
T ss_pred HHHH-HhCCceEEeccccch-hHHHHHHHHhCCCCCEEEECCCCHHHHHHHHHHhhcCCcEEEEEcCCCCC-----Cccc
Confidence 9999 999999999874 4 68888888877789999999998 7889999999999 999999975431 1123
Q ss_pred chHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 267 NLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 267 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
....++.++ ++.++....+. ..+.++++++++.+|.+++ .+..+|+|+++++|++.+.+++. +|+||++
T Consensus 304 ~~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~l~~~~~i~~~~~l~~~~~A~~~~~~~~~-~kvvi~~ 374 (374)
T 1cdo_A 304 RPIQLIAGR-TWKGSMFGGFK--GKDGVPKMVKAYLDKKVKLDEFITHRMPLESVNDAIDLMKHGKC-IRTVLSL 374 (374)
T ss_dssp CHHHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred CHHHHhcCC-eEEEEecCCCC--cHHHHHHHHHHHHcCCCChHHheeeEecHHHHHHHHHHHHCCCe-eEEEEeC
Confidence 444556666 88776543221 2567899999999999884 56778899999999999998875 7999875
|
| >2jhf_A Alcohol dehydrogenase E chain; oxidoreductase, metal coordination, NAD, zinc, inhibition, acetylation, metal-binding; HET: NAD; 1.0A {Equus caballus} SCOP: b.35.1.2 c.2.1.1 PDB: 1adc_A* 1adf_A* 1adg_A* 1adb_A* 1bto_A* 1heu_A* 1hf3_A* 1hld_A* 1lde_A* 1ldy_A* 1mg0_A* 1n92_A* 1p1r_A* 1ye3_A 1het_A* 2jhg_A* 2ohx_A* 2oxi_A* 3bto_A* 4dwv_A* ... | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=365.02 Aligned_cols=311 Identities=19% Similarity=0.236 Sum_probs=261.7
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|++|||+++.++ +.+ +++++.+.| .++++||+|||.++|||++|++.+.|..+.. +|.++|||++| +|
T Consensus 6 ~~~mkA~~~~~~--g~~----l~~~~~~~p---~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~-~P~v~GhE~~G--~V 73 (374)
T 2jhf_A 6 VIKCKAAVLWEE--KKP----FSIEEVEVA---PPKAHEVRIKMVATGICRSDDHVVSGTLVTP-LPVIAGHEAAG--IV 73 (374)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHHTSSCCC-SSBCCCCSEEE--EE
T ss_pred ceeEEEEEEecC--CCc----eEEEEccCC---CCCCCeEEEEEeEEeechhhHHHHcCCCCCC-CCcccCcCceE--EE
Confidence 578999999988 655 677665554 4589999999999999999999988865432 78999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeec
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVT 112 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~ 112 (342)
+++|++|++|++||||++. |+|+||++++
T Consensus 74 ~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~~g~~~~~~~g~~~~~~~~~G~~aey~~v~ 153 (374)
T 2jhf_A 74 ESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 153 (374)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred EEECCCCCCCCCCCEEEECCCCCCCCCccccCCCcCcCCCCccccccccccCCcccccccccccccccCCccCeeEEEEc
Confidence 9999999999999999852 7899999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHH
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKID 191 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~ 191 (342)
++.++++ |+++++. ++|++++++.|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++
T Consensus 154 ~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~ 230 (374)
T 2jhf_A 154 EISVAKI-DAASPLE-KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFA 230 (374)
T ss_dssp GGGEEEC-CTTCCHH-HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHH
T ss_pred hHHeEEC-CCCCCHH-HhhhhccHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCeEEEEcCCHHHHH
Confidence 9999999 9994443 378888999999999977889999999999995 9999999999999999 8999999999999
Q ss_pred HHHHHcCCCeeEecCC--chhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccc
Q 019332 192 LLKNKFGFDEAFNYKE--EPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHN 267 (342)
Q Consensus 192 ~~~~~~g~~~v~~~~~--~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~ 267 (342)
+++ ++|+++++|+++ . ++.+.+++.+++++|++|||+|+ ..+..++++++++ |+++.+|..... ......
T Consensus 231 ~~~-~lGa~~vi~~~~~~~-~~~~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~~G~iv~~G~~~~~----~~~~~~ 304 (374)
T 2jhf_A 231 KAK-EVGATECVNPQDYKK-PIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPDS----QNLSMN 304 (374)
T ss_dssp HHH-HTTCSEEECGGGCSS-CHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCTT----CCEEEC
T ss_pred HHH-HhCCceEecccccch-hHHHHHHHHhCCCCcEEEECCCCHHHHHHHHHHhhcCCcEEEEeccCCCC----CccccC
Confidence 998 999999999874 4 68888998887789999999998 7889999999999 999999975431 011233
Q ss_pred hHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 268 LMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 268 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
...++.++ ++.++....+. ..+.++++++++.+|.+++ .+..+|+|+++++|++.+.+++. +|+||++
T Consensus 305 ~~~~~~~~-~i~g~~~~~~~--~~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~-~Kvvi~~ 374 (374)
T 2jhf_A 305 PMLLLSGR-TWKGAIFGGFK--SKDSVPKLVADFMAKKFALDPLITHVLPFEKINEGFDLLRSGES-IRTILTF 374 (374)
T ss_dssp THHHHTTC-EEEECSGGGCC--HHHHHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHTTCC-SEEEEEC
T ss_pred HHHHhcCC-eEEEeccCCCC--hHHHHHHHHHHHHcCCCCchhheEEEEeHHHHHHHHHHHHCCCc-ceEEEeC
Confidence 44556677 88776543321 2567899999999999874 56778899999999999988774 7999874
|
| >2hcy_A Alcohol dehydrogenase 1; tetramer of asymmetric dimers, zinc coordination, intramolec disulfide bonds, oxidoreductase; HET: 8ID; 2.44A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=362.10 Aligned_cols=312 Identities=19% Similarity=0.205 Sum_probs=265.8
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYG 81 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g 81 (342)
+|.+|||+++.++ |.+ +++++. |.| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++|
T Consensus 2 ~p~~mka~~~~~~--g~~----l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G-- 70 (347)
T 2hcy_A 2 IPETQKGVIFYES--HGK----LEYKDI--PVP-KPKANELLINVKYSGVCHTDLHAWHGDWPLPVKLPLVGGHEGAG-- 70 (347)
T ss_dssp CCSEEEEEEESST--TCC----CEEEEE--ECC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSEECCCEEEE--
T ss_pred CCcccEEEEEeCC--CCC----CEEEEe--eCC-CCCCCEEEEEEEEEEechhHHHHhcCCCCCCCCCCcccCccceE--
Confidence 4568999999988 644 677664 445 45899999999999999999998888653 23568999999776
Q ss_pred EEEEecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchh
Q 019332 82 VAKVLDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYT 130 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~ 130 (342)
+|+++|++|++|++||||++ .|+|+||++++++.++++ |+++++. ++
T Consensus 71 ~V~~vG~~v~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~a 148 (347)
T 2hcy_A 71 VVVGMGENVKGWKIGDYAGIKWLNGSCMACEYCELGNESNCPHADLSGYTHDGSFQQYATADAVQAAHI-PQGTDLA-QV 148 (347)
T ss_dssp EEEEECTTCCSCCTTCEEEECSEEECCSSSTTTTTTCGGGCTTCEEBTTTBCCSSBSEEEEETTTSEEE-CTTCCHH-HH
T ss_pred EEEEECCCCCCCcCCCEEEEecCCCCCCCChhhhCCCcccCccccccccCCCCcceeEEEeccccEEEC-CCCCCHH-HH
Confidence 99999999999999999985 278999999999999999 9994443 27
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecC-Cch
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYK-EEP 209 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~-~~~ 209 (342)
|+++++++|||+++.+ .++++|++|||+|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+. +.
T Consensus 149 a~l~~~~~ta~~~l~~-~~~~~g~~vlV~Ga~ggiG~~~~~~a~~~Ga~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~- 225 (347)
T 2hcy_A 149 APILCAGITVYKALKS-ANLMAGHWVAISGAAGGLGSLAVQYAKAMGYRVLGIDGGEGKEELFR-SIGGEVFIDFTKEK- 225 (347)
T ss_dssp GGGGTHHHHHHHHHHT-TTCCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSTTHHHHHH-HTTCCEEEETTTCS-
T ss_pred HHHhhhHHHHHHHHHh-cCCCCCCEEEEECCCchHHHHHHHHHHHCCCcEEEEcCCHHHHHHHH-HcCCceEEecCccH-
Confidence 8889999999999955 58999999999999999999999999999999999999999999888 89998889987 44
Q ss_pred hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 210 DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 210 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
++.+.+++.+.+++|++||++|. ..+..++++|+++|+++.+|...+. ........++.+++++.++....
T Consensus 226 ~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~--- 297 (347)
T 2hcy_A 226 DIVGAVLKATDGGAHGVINVSVSEAAIEASTRYVRANGTTVLVGMPAGA-----KCCSDVFNQVVKSISIVGSYVGN--- 297 (347)
T ss_dssp CHHHHHHHHHTSCEEEEEECSSCHHHHHHHTTSEEEEEEEEECCCCTTC-----EEEEEHHHHHHTTCEEEECCCCC---
T ss_pred hHHHHHHHHhCCCCCEEEECCCcHHHHHHHHHHHhcCCEEEEEeCCCCC-----CCCCCHHHHhhCCcEEEEccCCC---
Confidence 78888888775589999999998 7889999999999999999976532 12344566778899998876544
Q ss_pred chHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 289 LYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
.+.++++++++.+|.+++.+ .+|+|+++++|++.+.+++..||+|+++++
T Consensus 298 --~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvv~~~~ 347 (347)
T 2hcy_A 298 --RADTREALDFFARGLVKSPI-KVVGLSTLPEIYEKMEKGQIVGRYVVDTSK 347 (347)
T ss_dssp --HHHHHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEESCC
T ss_pred --HHHHHHHHHHHHhCCCccce-EEEcHHHHHHHHHHHHcCCcceeEEEecCC
Confidence 56788999999999999864 578999999999999998888999998763
|
| >3krt_A Crotonyl COA reductase; structural genomics, protein structure initiative, NYSGXRC, PSI-2; 2.19A {Streptomyces coelicolor} PDB: 3hzz_A | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-51 Score=379.53 Aligned_cols=320 Identities=19% Similarity=0.209 Sum_probs=266.7
Q ss_pred CCccccccEEEEecccC----------CCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccC-------
Q 019332 1 MPEMVRNKQVILKDYVS----------GFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI------- 63 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~----------g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~------- 63 (342)
|++|.+|||+++.++.. +.| .+.+++++ +|.| .++++||||||.++|||++|++...+.
T Consensus 25 ~~iP~tmkA~v~~~~~~~~~~~~~~~~~~~-~~~l~~~e--~p~P-~~~~~eVlVkV~a~gic~sD~~~~~~~~~~~~~~ 100 (456)
T 3krt_A 25 LPLPESYRAITVHKDETEMFAGLETRDKDP-RKSIHLDD--VPVP-ELGPGEALVAVMASSVNYNSVHTSIFEPLSTFGF 100 (456)
T ss_dssp SCCCSCEEEEEEEGGGTTTTTTCCGGGCCH-HHHCEEEE--ECCC-CCCTTEEEEEEEEEEECHHHHHHHTTCSSCSHHH
T ss_pred CCCCcceEEEEEeccccccccccccccCCC-CCCcEEEE--ccCC-CCCCCeEEEEEEEEEecchhhhhhhcCcccchhh
Confidence 56778999999998610 111 14567766 4555 458999999999999999998654321
Q ss_pred ------C----CCcccc-CCCCCcccccEEEEEecCCCCCCCCCCEEEe------------------------------c
Q 019332 64 ------K----GSYVES-FKPGMPISGYGVAKVLDSENPEFKKGDLVWG------------------------------M 102 (342)
Q Consensus 64 ------~----~~~~~p-~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~------------------------------~ 102 (342)
. ....+| .++|||++| +|+++|++|++|++||+|++ .
T Consensus 101 ~~~~g~~~~~~~~~~~P~~v~GhE~~G--~Vv~vG~~v~~~~vGdrV~~~~~~c~~~~~~~~~~~~~c~~~~~~G~~~~~ 178 (456)
T 3krt_A 101 LERYGRVSDLAKRHDLPYHVIGSDLAG--VVLRTGPGVNAWQAGDEVVAHCLSVELESSDGHNDTMLDPEQRIWGFETNF 178 (456)
T ss_dssp HHHHHTSCHHHHTTCCSEEECCSCCEE--EEEEECTTCCSCCTTCEEEECCEECCCCSGGGTTSGGGCTTCEETTTTSSS
T ss_pred hhhccccccccccCCCCcccccceeEE--EEEEECCCCCCCCCCCEEEEeCCcccccccccccccccCccccccccCCCC
Confidence 1 012345 689999776 99999999999999999997 2
Q ss_pred cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh--cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEE
Q 019332 103 TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGECVFISAASGAVGQLVGQFAKLLGCYV 180 (342)
Q Consensus 103 g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~--~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~V 180 (342)
|+|+||++++.+.++++ |+++++. ++|+++.+++|||+++... +++++|++|||+|++|++|++++|+|+..|++|
T Consensus 179 G~~aey~~v~~~~~~~~-P~~l~~~-~aa~l~~~~~ta~~al~~~~~~~~~~g~~VlV~GasG~vG~~avqlak~~Ga~v 256 (456)
T 3krt_A 179 GGLAEIALVKSNQLMPK-PDHLSWE-EAAAPGLVNSTAYRQLVSRNGAGMKQGDNVLIWGASGGLGSYATQFALAGGANP 256 (456)
T ss_dssp CSSBSEEEEEGGGEEEC-CTTSCHH-HHHSSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEE
T ss_pred CcccceEEechHHeeEC-CCCCCHH-HHHHhhhHHHHHHHHHHhhcccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCeE
Confidence 89999999999999999 9994444 2777888899999999654 789999999999999999999999999999999
Q ss_pred EEEeCChhhHHHHHHHcCCCeeEecCCchh-----------------HHHHHHHHCCC-CccEEEeCCChhhHHHHHHhh
Q 019332 181 VGSAGSKDKIDLLKNKFGFDEAFNYKEEPD-----------------LNEALKRYFPE-GIDIYFENVGGKMLDAVLLNM 242 (342)
Q Consensus 181 i~~~~s~~~~~~~~~~~g~~~v~~~~~~~~-----------------~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l 242 (342)
++++++++|+++++ ++|++.++|+.+. + +.+.+++.+++ ++|++|||+|++.+..+++++
T Consensus 257 i~~~~~~~~~~~~~-~lGa~~vi~~~~~-d~~~~~~~~~~~~~~~~~~~~~i~~~t~g~g~Dvvid~~G~~~~~~~~~~l 334 (456)
T 3krt_A 257 ICVVSSPQKAEICR-AMGAEAIIDRNAE-GYRFWKDENTQDPKEWKRFGKRIRELTGGEDIDIVFEHPGRETFGASVFVT 334 (456)
T ss_dssp EEEESSHHHHHHHH-HHTCCEEEETTTT-TCCSEEETTEECHHHHHHHHHHHHHHHTSCCEEEEEECSCHHHHHHHHHHE
T ss_pred EEEECCHHHHHHHH-hhCCcEEEecCcC-cccccccccccchHHHHHHHHHHHHHhCCCCCcEEEEcCCchhHHHHHHHh
Confidence 99999999999998 9999999998774 3 35888888887 999999999999999999999
Q ss_pred hhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHH
Q 019332 243 KIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPAT 322 (342)
Q Consensus 243 ~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a 322 (342)
+++|+++.+|...+. ........++.+++++.++.... .+.+.++++++.+|.+++.+..+|+|+++++|
T Consensus 335 ~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~eA 404 (456)
T 3krt_A 335 RKGGTITTCASTSGY-----MHEYDNRYLWMSLKRIIGSHFAN-----YREAWEANRLIAKGRIHPTLSKVYSLEDTGQA 404 (456)
T ss_dssp EEEEEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHH
T ss_pred hCCcEEEEEecCCCc-----ccccCHHHHHhcCeEEEEeccCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHH
Confidence 999999999976542 22345566777888888876655 34566789999999999999899999999999
Q ss_pred HHHHHcCCccceEEEEec
Q 019332 323 LIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 323 ~~~~~~~~~~gkvvv~~~ 340 (342)
++.+.+++..||+||.+.
T Consensus 405 ~~~l~~~~~~GKvvv~~~ 422 (456)
T 3krt_A 405 AYDVHRNLHQGKVGVLCL 422 (456)
T ss_dssp HHHHHTTCSSSEEEEESS
T ss_pred HHHHHhCCCCCcEEEEeC
Confidence 999999999999999874
|
| >4ej6_A Putative zinc-binding dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium; 1.89A {Sinorhizobium meliloti} PDB: 4ejm_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-51 Score=370.45 Aligned_cols=308 Identities=20% Similarity=0.225 Sum_probs=261.9
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
+|++|||+++.++ + .+++++.+. | .++++||+|||.++|||++|++.+.|.+ ...+|.++|||++| +
T Consensus 20 ~p~~mkA~v~~~~--~-----~l~~~~~~~--P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~-~~~~p~v~G~e~~G--~ 86 (370)
T 4ej6_A 20 FQSMMKAVRLESV--G-----NISVRNVGI--P-EPGPDDLLVKVEACGICGTDRHLLHGEF-PSTPPVTLGHEFCG--I 86 (370)
T ss_dssp -CCEEEEEEEEET--T-----EEEEEEEEC--C-CCCTTEEEEEEEEEECCHHHHHHHTTSS-CCCSSEECCCSEEE--E
T ss_pred cchheEEEEEecC--C-----ceEEEEccC--C-CCCCCeEEEEEEEEeecHHHHHHHcCCC-CCCCCeecCcceEE--E
Confidence 3578999999987 4 356666444 5 4589999999999999999999999865 34568999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEe------------------------------ccccceeEeecCCcceeecCCCCCccchhhc
Q 019332 83 AKVLDSENPEFKKGDLVWG------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGI 132 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~ 132 (342)
|+++|++|++|++||+|++ .|+|+||++++.+.++++ |++ ++++.|+
T Consensus 87 V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~--~~~~~aa 163 (370)
T 4ej6_A 87 VVEAGSAVRDIAPGARITGDPNISCGRCPQCQAGRVNLCRNLRAIGIHRDGGFAEYVLVPRKQAFEI-PLT--LDPVHGA 163 (370)
T ss_dssp EEEECTTCCSSCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEE-CTT--SCTTGGG
T ss_pred EEEECCCCCCCCCCCEEEECCCCCCCCChHHhCcCcccCCCccccCCCCCCcceEEEEEchhhEEEC-CCC--CCHHHHh
Confidence 9999999999999999986 279999999999999999 999 5554445
Q ss_pred cCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhH
Q 019332 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDL 211 (342)
Q Consensus 133 l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~ 211 (342)
++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|++.++|+++. ++
T Consensus 164 l~~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~-~~ 239 (370)
T 4ej6_A 164 FCEPLACCLHGV-DLSGIKAGSTVAILGG-GVIGLLTVQLARLAGATTVILSTRQATKRRLAE-EVGATATVDPSAG-DV 239 (370)
T ss_dssp GHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTSS-CH
T ss_pred hhhHHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HcCCCEEECCCCc-CH
Confidence 778999999999 6789999999999997 9999999999999999 9999999999999999 9999999999988 89
Q ss_pred HHHHHH---HCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 212 NEALKR---YFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 212 ~~~i~~---~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
.+.+++ .+++++|++|||+|+ ..+..++++|+++|+++.+|..... .....+...++.+++++.++....
T Consensus 240 ~~~i~~~~~~~~gg~Dvvid~~G~~~~~~~~~~~l~~~G~vv~~G~~~~~----~~~~~~~~~~~~~~~~i~g~~~~~-- 313 (370)
T 4ej6_A 240 VEAIAGPVGLVPGGVDVVIECAGVAETVKQSTRLAKAGGTVVILGVLPQG----EKVEIEPFDILFRELRVLGSFINP-- 313 (370)
T ss_dssp HHHHHSTTSSSTTCEEEEEECSCCHHHHHHHHHHEEEEEEEEECSCCCTT----CCCCCCHHHHHHTTCEEEECCSCT--
T ss_pred HHHHHhhhhccCCCCCEEEECCCCHHHHHHHHHHhccCCEEEEEeccCCC----CccccCHHHHHhCCcEEEEeccCh--
Confidence 999998 776799999999996 7899999999999999999975542 122345677888999999876543
Q ss_pred cchHHHHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcCC-ccceEEEEec
Q 019332 288 HLYPKFLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSGR-NVGKQVVAVA 340 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~~ 340 (342)
..++++++++.+|+++ +.+..+|+|+++++|++.+.+++ ..+|++++++
T Consensus 314 ----~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~kvv~~~~ 365 (370)
T 4ej6_A 314 ----FVHRRAADLVATGAIEIDRMISRRISLDEAPDVISNPAAAGEVKVLVIPSAE 365 (370)
T ss_dssp ----TCHHHHHHHHHTTCSCCGGGEEEEECGGGHHHHHHSCCCTTCSEEEECCC--
T ss_pred ----HHHHHHHHHHHcCCCChhHcEEEEEEHHHHHHHHHHHHcCCCCeEEEEEccc
Confidence 2378899999999995 45778899999999999998877 4578888764
|
| >1rjw_A ADH-HT, alcohol dehydrogenase; oxidoreductase, NAD, zinc, tetramer; 2.35A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 3pii_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.8e-50 Score=360.78 Aligned_cols=305 Identities=20% Similarity=0.237 Sum_probs=262.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ |.+ +++++ +|.| +++++||+|||.++|||++|++.+.|.++ ...+|.++|||++| +|++
T Consensus 1 Mka~~~~~~--g~~----l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~GhE~~G--~V~~ 69 (339)
T 1rjw_A 1 MKAAVVEQF--KEP----LKIKE--VEKP-TISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVG--IVEE 69 (339)
T ss_dssp CEEEEBSST--TSC----CEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEE--EEEE
T ss_pred CeEEEEcCC--CCC----cEEEE--eeCC-CCCCCEEEEEEEEEeEchhhHHHhcCCCCcCCCCCeeccccceE--EEEE
Confidence 589999888 644 56765 5555 45899999999999999999998888653 23568999999776 9999
Q ss_pred ecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 86 LDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
+|++|++|++||||++ .|+|+||++++++.++++ |+++++. ++|+++
T Consensus 70 vG~~v~~~~vGdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~l~ 147 (339)
T 1rjw_A 70 VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKI-PDNLSFE-EAAPIF 147 (339)
T ss_dssp ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEEC-CTTSCHH-HHGGGG
T ss_pred ECCCCCcCCCCCEEEEecCCCCCCCCchhhCcCcccCCCcceeecCCCCcceeeEEechHHEEEC-CCCCCHH-Hhhhhh
Confidence 9999999999999985 178999999999999999 9994443 378899
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHH
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA 214 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 214 (342)
+++.|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++. ++.+.
T Consensus 148 ~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~d~~~~-~~~~~ 223 (339)
T 1rjw_A 148 CAGVTTYKALKV-TGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE-DAAKF 223 (339)
T ss_dssp THHHHHHHHHHH-HTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS-CHHHH
T ss_pred hhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HCCCCEEecCCCc-cHHHH
Confidence 999999999965 48999999999999 88999999999999999999999999999998 8999999999877 88888
Q ss_pred HHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHH
Q 019332 215 LKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF 293 (342)
Q Consensus 215 i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 293 (342)
+++.+ +++|++||++|. ..+..++++++++|+++.+|...+. ...+...++.+++++.++.... .+.
T Consensus 224 ~~~~~-~~~d~vid~~g~~~~~~~~~~~l~~~G~~v~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~-----~~~ 291 (339)
T 1rjw_A 224 MKEKV-GGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPEE------MPIPIFDTVLNGIKIIGSIVGT-----RKD 291 (339)
T ss_dssp HHHHH-SSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSE------EEEEHHHHHHTTCEEEECCSCC-----HHH
T ss_pred HHHHh-CCCCEEEECCCCHHHHHHHHHHhhcCCEEEEecccCCC------CccCHHHHHhCCcEEEEeccCC-----HHH
Confidence 88877 579999999998 7889999999999999999875432 2344556777899988875543 567
Q ss_pred HHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 294 LEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 294 ~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
++++++++.+|.+++.+ .+|+|+++++|++.+.+++..||+|+++++
T Consensus 292 ~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 338 (339)
T 1rjw_A 292 LQEALQFAAEGKVKTII-EVQPLEKINEVFDRMLKGQINGRVVLTLED 338 (339)
T ss_dssp HHHHHHHHHTTSCCCCE-EEEEGGGHHHHHHHHHTTCCSSEEEEECCC
T ss_pred HHHHHHHHHcCCCCccE-EEEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 89999999999999864 578999999999999998888999999875
|
| >2d8a_A PH0655, probable L-threonine 3-dehydrogenase; pyrococcus horikoshii OT3, structural genomics; HET: NAD; 2.05A {Pyrococcus horikoshii} PDB: 2dfv_A* 3gfb_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.2e-51 Score=365.71 Aligned_cols=306 Identities=20% Similarity=0.188 Sum_probs=258.3
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCccccccccc-CCC--CccccCCCCCccccc
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTN-IKG--SYVESFKPGMPISGY 80 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~-~~~--~~~~p~~~G~e~~G~ 80 (342)
|++|||+++.++ |. .+++++. |.| .++++||||||.++|||++|++.+.| .++ ...+|.++|||++|
T Consensus 2 m~~mka~~~~~~--g~----~l~~~~~--~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G- 71 (348)
T 2d8a_A 2 SEKMVAIMKTKP--GY----GAELVEV--DVP-KPGPGEVLIKVLATSICGTDLHIYEWNEWAQSRIKPPQIMGHEVAG- 71 (348)
T ss_dssp -CEEEEEEECSS--SS----SCEEEEE--ECC-CCCTTEEEEEEEEEECCHHHHHHHHTCTTHHHHCCSSEECCCEEEE-
T ss_pred CCcceEEEEECC--CC----CEEEEEC--CCC-CCCcCEEEEEEeEEEecHHHHHHHcCCCCCcccCCCCCccCccceE-
Confidence 567999999988 53 3677664 445 45899999999999999999999887 332 23568999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccch-
Q 019332 81 GVAKVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYY- 129 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~- 129 (342)
+|+++|++|++|++||||++. |+|+||++++++.++++ |++ ++++
T Consensus 72 -~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~--~~~~~ 147 (348)
T 2d8a_A 72 -EVVEIGPGVEGIEVGDYVSVETHIVCGKCYACRRGQYHVCQNTKIFGVDTDGVFAEYAVVPAQNIWKN-PKS--IPPEY 147 (348)
T ss_dssp -EEEEECTTCCSCCTTCEEEECCEECCSCCC------------CEETTTSSCCSSBSEEEEEGGGEEEC-CTT--SCHHH
T ss_pred -EEEEECCCCCcCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCeecCCCCCcCcceEEeChHHeEEC-CCC--CCHHH
Confidence 999999999999999999874 78999999999999999 999 5544
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
+|.+ .++.|||+++ +.+++ +|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++ ++|+++++|+++.
T Consensus 148 aa~~-~~~~ta~~~l-~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~~Ga~~~~~~~~~ 222 (348)
T 2d8a_A 148 ATLQ-EPLGNAVDTV-LAGPI-SGKSVLITGA-GPLGLLGIAVAKASGAYPVIVSEPSDFRRELAK-KVGADYVINPFEE 222 (348)
T ss_dssp HTTH-HHHHHHHHHH-TTSCC-TTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHHHHH-HHTCSEEECTTTS
T ss_pred HHhh-hHHHHHHHHH-HhcCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEECCCCc
Confidence 5544 5888999999 66889 9999999999 9999999999999999 9999999999999998 9999999999887
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccch-HHHHhcceeeecceecc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNL-MYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~ 285 (342)
++.+.+++.+++ ++|++|||+|. ..+..++++++++|+++.+|...+. ...+. ..++.+++++.++....
T Consensus 223 -~~~~~v~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~~i~g~~~~~ 295 (348)
T 2d8a_A 223 -DVVKEVMDITDGNGVDVFLEFSGAPKALEQGLQAVTPAGRVSLLGLYPGK------VTIDFNNLIIFKALTIYGITGRH 295 (348)
T ss_dssp -CHHHHHHHHTTTSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHTTTTTCEEEECCCCC
T ss_pred -CHHHHHHHHcCCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEccCCCC------cccCchHHHHhCCcEEEEecCCC
Confidence 899999999887 89999999998 7889999999999999999975431 12334 55678889988865422
Q ss_pred cccchHHHHHHHHHHHHcCCc--eeeeeeeec-cccHHHHHHHHHcCCccceEEEEec
Q 019332 286 YYHLYPKFLEMIIPHIKEGKI--VYVEDMAEG-LESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~~--~~~~~~~~~-l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
..+.++++++++.+|.+ ++.+..+|+ |+++++|++.+.+ ...||+|++++
T Consensus 296 ----~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~-~~~gKvvi~~~ 348 (348)
T 2d8a_A 296 ----LWETWYTVSRLLQSGKLNLDPIITHKYKGFDKYEEAFELMRA-GKTGKVVFMLK 348 (348)
T ss_dssp ----SHHHHHHHHHHHHHTCCCCTTTEEEEEESSTTHHHHHHHHHT-TCCSEEEEEC-
T ss_pred ----cHHHHHHHHHHHHcCCCChHHhheeeCCCHHHHHHHHHHHhC-CCceEEEEeeC
Confidence 14678899999999996 456777889 9999999999977 56799999864
|
| >3nx4_A Putative oxidoreductase; csgid, structural genomics, center for struc genomics of infectious diseases, PSI, protein structure INI; HET: MSE NAP; 1.90A {Salmonella enterica subsp} PDB: 1o89_A 1o8c_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8e-52 Score=369.03 Aligned_cols=310 Identities=19% Similarity=0.219 Sum_probs=260.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ |.| +.++++ ++|.| .++++||+|||.++|||++|++.+.|.++. ..+|.++|||++| +|++
T Consensus 1 MkA~~~~~~--g~~--~~l~~~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G--~V~~ 71 (324)
T 3nx4_A 1 MQALILEQQ--DGK--TLASVQ--HLEES-QLPAGDVTVDVHWSSLNYKDALAITGKGKIIRHFPMIPGIDFAG--TVHA 71 (324)
T ss_dssp CEEEEEEES--SSS--EEEEEE--ECCGG-GSCCCSEEEEEEEEEECHHHHHHHHTCTTCCCSSSBCCCSEEEE--EEEE
T ss_pred CceEEEecC--CCC--ceeeEe--ecCCC-CCCCCEEEEEEEEEeCCHHHHhhhcCCCCCCCCCCccccceeEE--EEEE
Confidence 699999999 877 345554 46666 458999999999999999999999987642 4678999999776 9999
Q ss_pred ecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh--cCCCCCC
Q 019332 86 LDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGE 154 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~--~~~~~~~ 154 (342)
+| +++|++||||++. |+|+||+.++++.++++ |+++++. ++|+++..++|||++|... .++++++
T Consensus 72 ~G--v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al~~~~~~~~~~~~ 147 (324)
T 3nx4_A 72 SE--DPRFHAGQEVLLTGWGVGENHWGGLAERARVKGDWLVAL-PAGLSSR-NAMIIGTAGFTAMLCVMALEDAGIRPQD 147 (324)
T ss_dssp ES--STTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCGGG
T ss_pred eC--CCCCCCCCEEEEcccccCCCCCCceeeEEecCHHHcEEC-CCCCCHH-HHHHhhhHHHHHHHHHHHhhhcccCCCC
Confidence 98 6899999999953 89999999999999999 9994444 3888999999999998633 5566633
Q ss_pred -EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 -CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 -~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|||+|++|++|++++|+|+..|++|++++++++|+++++ ++|+++++|+++. +. +++++++++|++|||+|++
T Consensus 148 g~VlV~Ga~G~vG~~aiqla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~---~~~~~~~~~d~v~d~~g~~ 222 (324)
T 3nx4_A 148 GEVVVTGASGGVGSTAVALLHKLGYQVAAVSGRESTHGYLK-SLGANRILSRDEF-AE---SRPLEKQLWAGAIDTVGDK 222 (324)
T ss_dssp CCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTCSEEEEGGGS-SC---CCSSCCCCEEEEEESSCHH
T ss_pred CeEEEECCCcHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHH-hcCCCEEEecCCH-HH---HHhhcCCCccEEEECCCcH
Confidence 4999999999999999999999999999999999999999 9999999999765 43 5555556899999999999
Q ss_pred hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeee
Q 019332 234 MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDM 312 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~ 312 (342)
.+..++++++++|+++.+|...+. ........++.+++++.++..... .....+.++++++++.+|.+++. ..
T Consensus 223 ~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~-~~ 296 (324)
T 3nx4_A 223 VLAKVLAQMNYGGCVAACGLAGGF-----ALPTTVMPFILRNVRLQGVDSVMTPPARRAEAWARLVKDLPESFYAQA-AT 296 (324)
T ss_dssp HHHHHHHTEEEEEEEEECCCTTCS-----EEEEESHHHHHHCCEEEECCSTTCCHHHHHHHHHHHHHHSCHHHHHHH-EE
T ss_pred HHHHHHHHHhcCCEEEEEecCCCC-----CCCCCHHHHhhcCeEEEEEeccccChHHHHHHHHHHHHHHHcCCCCCC-ce
Confidence 999999999999999999976542 123455667789999998765433 33345678899999999999987 88
Q ss_pred eeccccHHHHHHHHHcCCccceEEEEec
Q 019332 313 AEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 313 ~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
+|+++++++|++.+.+++..||+|++++
T Consensus 297 ~~~l~~~~~A~~~~~~~~~~gkvvv~~~ 324 (324)
T 3nx4_A 297 EITLADAPKFADAIINNQVQGRTLVKIK 324 (324)
T ss_dssp EEEGGGHHHHHHHHHTTCCCSEEEEECC
T ss_pred eEeHHHHHHHHHHHHhCCCCceEEEecC
Confidence 8999999999999999999999999874
|
| >3goh_A Alcohol dehydrogenase, zinc-containing; NP_718042.1, alcohol dehydrogenase superfamily protein, ALCO dehydrogenase groes-like domain; 1.55A {Shewanella oneidensis} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.9e-52 Score=368.22 Aligned_cols=305 Identities=14% Similarity=0.138 Sum_probs=239.0
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|.+|||+++.+. | +.+++++.+ .| +++++||+|||.++|||++|++.+.|.++...+|.++|||++| +|
T Consensus 2 M~tMka~~~~~~----~--~~l~~~~~~--~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~i~G~e~~G--~V 70 (315)
T 3goh_A 2 MEQHQVWAYQTK----T--HSVTLNSVD--IP-ALAADDILVQNQAIGINPVDWKFIKANPINWSNGHVPGVDGAG--VI 70 (315)
T ss_dssp CCEEEEEEEETT----T--TEEEEEEEE--CC-CCCTTEEEEEEEEEEECHHHHHHHHHCTTCCCTTCCCCSEEEE--EE
T ss_pred CcceEEEEEeCC----C--CeeEEEecC--CC-CCCCCEEEEEEEEEecCHHHHHHHcCCCCcCCCCCEeeeeeEE--EE
Confidence 357899999852 2 346676654 45 4589999999999999999999999877666789999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEE
Q 019332 84 KVLDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVF 157 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vl 157 (342)
+++|++|++|++||||++. |+|+||++++++.++++ |+++++. ++|+++++++|||+++ +.+++++|++||
T Consensus 71 ~~vG~~v~~~~vGdrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~al-~~~~~~~g~~Vl 147 (315)
T 3goh_A 71 VKVGAKVDSKMLGRRVAYHTSLKRHGSFAEFTVLNTDRVMTL-PDNLSFE-RAAALPCPLLTAWQAF-EKIPLTKQREVL 147 (315)
T ss_dssp EEECTTSCGGGTTCEEEEECCTTSCCSSBSEEEEETTSEEEC-CTTSCHH-HHHTSHHHHHHHHHHH-TTSCCCSCCEEE
T ss_pred EEeCCCCCCCCCCCEEEEeCCCCCCcccccEEEEcHHHhccC-cCCCCHH-HHhhCccHHHHHHHHH-hhcCCCCCCEEE
Confidence 9999999999999999984 89999999999999999 9994443 2778999999999999 889999999999
Q ss_pred EecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhHHH
Q 019332 158 ISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDA 237 (342)
Q Consensus 158 I~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~ 237 (342)
|+|+ |++|++++|+|+..|++|++++ +++|+++++ ++|++++++ + .+++ ++++|++|||+|++.+..
T Consensus 148 V~Ga-G~vG~~a~qlak~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~-----d-~~~v----~~g~Dvv~d~~g~~~~~~ 214 (315)
T 3goh_A 148 IVGF-GAVNNLLTQMLNNAGYVVDLVS-ASLSQALAA-KRGVRHLYR-----E-PSQV----TQKYFAIFDAVNSQNAAA 214 (315)
T ss_dssp EECC-SHHHHHHHHHHHHHTCEEEEEC-SSCCHHHHH-HHTEEEEES-----S-GGGC----CSCEEEEECC-------T
T ss_pred EECC-CHHHHHHHHHHHHcCCEEEEEE-ChhhHHHHH-HcCCCEEEc-----C-HHHh----CCCccEEEECCCchhHHH
Confidence 9999 9999999999999999999999 899999999 999998884 2 1222 448999999999977788
Q ss_pred HHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc---chHHHHHHHHHHHHcCCceeeeeeee
Q 019332 238 VLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH---LYPKFLEMIIPHIKEGKIVYVEDMAE 314 (342)
Q Consensus 238 ~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~g~~~~~~~~~~ 314 (342)
++++|+++|+++.+|...... ........+..+++++.++.....+. ...+.++++++++.+|++++.+..+|
T Consensus 215 ~~~~l~~~G~~v~~g~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~ 290 (315)
T 3goh_A 215 LVPSLKANGHIICIQDRIPAP----IDPAFTRTISYHEIALGALHDFGDRQDWQILMQQGEALLTLIAQGKMEIAAPDIF 290 (315)
T ss_dssp TGGGEEEEEEEEEECCC--------------CCSEEEEECGGGHHHHCCHHHHHHHHHHHHHHHHHHHTTSSCCCCCEEE
T ss_pred HHHHhcCCCEEEEEeCCCCcc----ccchhhhcceeeEEEeecccccCChhHHHHHHHHHHHHHHHHHCCCcccccceEe
Confidence 999999999999997533210 00000111122333333332211111 23456889999999999999999999
Q ss_pred ccccHHHHHHHHHcCCccceEEEEecC
Q 019332 315 GLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 315 ~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
||+++++|++.+. +..||+|+++++
T Consensus 291 ~l~~~~~A~~~~~--~~~gKvvi~~~~ 315 (315)
T 3goh_A 291 RFEQMIEALDHSE--QTKLKTVLTLNE 315 (315)
T ss_dssp EGGGHHHHHHHHH--HHCCCEEEESCC
T ss_pred cHHHHHHHHHHHH--hcCCcEEEEecC
Confidence 9999999999998 677999999864
|
| >1piw_A Hypothetical zinc-type alcohol dehydrogenase- like protein in PRE5-FET4 intergenic...; ADH topology, NADP(H)dependent, oxidoreductase; HET: NAP; 3.00A {Saccharomyces cerevisiae} SCOP: b.35.1.2 c.2.1.1 PDB: 1ps0_A* 1q1n_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-51 Score=371.06 Aligned_cols=311 Identities=16% Similarity=0.095 Sum_probs=261.4
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCccccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGY 80 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~ 80 (342)
|+++.+|||+++.++ +.+ +++++.++|.| +++++||||||.++|||++|++.+.|.++...+|.++|||++|
T Consensus 1 M~~p~~mka~~~~~~--~~~----l~~~~~~~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~p~v~GhE~~G- 72 (360)
T 1piw_A 1 MSYPEKFEGIAIQSH--EDW----KNPKKTKYDPK-PFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVG- 72 (360)
T ss_dssp CCTTTCEEEEEECCS--SST----TSCEEEEECCC-CCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEE-
T ss_pred CCCChheEEEEEecC--CCC----eeEEeccccCC-CCCCCeEEEEEEEeccchhhHHHhcCCCCCCCCCcccCcCceE-
Confidence 888889999999988 654 56766225555 4589999999999999999999998866545578999999776
Q ss_pred EEEEEecCCCC-CCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecC
Q 019332 81 GVAKVLDSENP-EFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQH 121 (342)
Q Consensus 81 g~v~~vG~~v~-~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p 121 (342)
+|+++|++|+ +|++||||+. .|+|+||++++++.++++ |
T Consensus 73 -~V~~vG~~v~~~~~~GdrV~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P 150 (360)
T 1piw_A 73 -KVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPI-P 150 (360)
T ss_dssp -EEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEEC-C
T ss_pred -EEEEeCCCCCCCCCCCCEEEEecCCCCCCCChhhcCCCcccCcchhhccccccCCCccCCCcceeEEEEchhheEEC-C
Confidence 9999999999 9999999941 178999999999999999 9
Q ss_pred CCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe
Q 019332 122 TDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE 201 (342)
Q Consensus 122 ~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~ 201 (342)
+++++. ++|++++++.|||+++.+ +++++|++|||+|+ |++|++++|+|+..|++|++++++++++++++ ++|+++
T Consensus 151 ~~~~~~-~aa~l~~~~~ta~~~l~~-~~~~~g~~VlV~Ga-G~vG~~~~qlak~~Ga~Vi~~~~~~~~~~~~~-~lGa~~ 226 (360)
T 1piw_A 151 ENIPSH-LAAPLLCGGLTVYSPLVR-NGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADH 226 (360)
T ss_dssp TTSCHH-HHGGGGTHHHHHHHHHHH-TTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSE
T ss_pred CCCCHH-HhhhhhhhHHHHHHHHHH-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCCE
Confidence 994443 278899999999999965 89999999999999 99999999999999999999999999999999 899999
Q ss_pred eEecCCchhHHHHHHHHCCCCccEEEeCCCh---hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceee
Q 019332 202 AFNYKEEPDLNEALKRYFPEGIDIYFENVGG---KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRM 278 (342)
Q Consensus 202 v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (342)
++|+++..++.+.++ +++|++||++|+ ..+..++++++++|+++.+|.... . ...+...++.+++++
T Consensus 227 v~~~~~~~~~~~~~~----~~~D~vid~~g~~~~~~~~~~~~~l~~~G~iv~~g~~~~--~----~~~~~~~~~~~~~~i 296 (360)
T 1piw_A 227 YIATLEEGDWGEKYF----DTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQ--H----EMLSLKPYGLKAVSI 296 (360)
T ss_dssp EEEGGGTSCHHHHSC----SCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCS--S----CCEEECGGGCBSCEE
T ss_pred EEcCcCchHHHHHhh----cCCCEEEECCCCCcHHHHHHHHHHhcCCCEEEEecCCCC--c----cccCHHHHHhCCeEE
Confidence 999865213333332 479999999998 678899999999999999987543 1 012334466788888
Q ss_pred ecceecccccchHHHHHHHHHHHHcCCceeeeeeeecccc--HHHHHHHHHcCCccceEEEEecC
Q 019332 279 EGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLES--APATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~--~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
.++.... .+.++++++++.+|.+++.+ .+|+|++ +++|++.+.+++..||+|+++++
T Consensus 297 ~g~~~~~-----~~~~~~~~~l~~~g~l~~~i-~~~~l~~~~~~~A~~~~~~~~~~gKvvi~~~~ 355 (360)
T 1piw_A 297 SYSALGS-----IKELNQLLKLVSEKDIKIWV-ETLPVGEAGVHEAFERMEKGDVRYRFTLVGYD 355 (360)
T ss_dssp EECCCCC-----HHHHHHHHHHHHHTTCCCCE-EEEESSHHHHHHHHHHHHHTCCSSEEEEECCH
T ss_pred EEEecCC-----HHHHHHHHHHHHhCCCcceE-EEEeccHhHHHHHHHHHHCCCCceEEEEecCc
Confidence 8876544 56789999999999999887 7889999 99999999998888999999864
|
| >1vj0_A Alcohol dehydrogenase, zinc-containing; TM0436, structural G JCSG, PSI, protein structure initiative, joint center for S genomics; 2.00A {Thermotoga maritima} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=365.39 Aligned_cols=306 Identities=18% Similarity=0.192 Sum_probs=264.0
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
.+|||+++.++ |. .+++++.+. | .++++||||||.++|||++|++.+.|.++...+|.++|||++| +|+
T Consensus 16 ~~mka~~~~~~--g~----~l~~~~~~~--P-~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~P~v~GhE~~G--~V~ 84 (380)
T 1vj0_A 16 LKAHAMVLEKF--NQ----PLVYKEFEI--S-DIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAG--RVV 84 (380)
T ss_dssp EEEEEEEBCST--TS----CCEEEEEEE--C-CCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEE--EEE
T ss_pred hheEEEEEecC--CC----CeEEEEccC--C-CCCCCEEEEEEeEEeecccchHHhcCCCCCCCCCcccCcCcEE--EEE
Confidence 57899999988 52 367766544 4 4589999999999999999999998865434578999999776 999
Q ss_pred EecCCCC------CCCCCCEEEe---------------------------------------ccccceeEee-cCCccee
Q 019332 85 VLDSENP------EFKKGDLVWG---------------------------------------MTGWEEYSLV-TAPQLFK 118 (342)
Q Consensus 85 ~vG~~v~------~~~vGd~V~~---------------------------------------~g~~~~~~~v-~~~~~~~ 118 (342)
++| +|+ +|++||||++ .|+|+||+++ +++.+++
T Consensus 85 ~vG-~V~~~~~~~~~~vGdrV~~~~~~~cg~C~~C~~~g~~~~C~~~~~~g~~~~~~~~~~~~G~~aey~~v~~~~~~~~ 163 (380)
T 1vj0_A 85 EVN-GEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVLK 163 (380)
T ss_dssp EES-SCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEEE
T ss_pred EeC-CccccccCCCCCCCCEEEEcccCCCCCCHHHhcCCCcccCCCcceeccccccCCCCCCCccccceEEEcccceEEE
Confidence 999 999 9999999986 2789999999 9999999
Q ss_pred ecCCCCCccch-hhccCCchhhHHHhhhhhcC-CCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHH
Q 019332 119 IQHTDVPLSYY-TGILGMPGMTAYAGFYEVCS-PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKN 195 (342)
Q Consensus 119 i~p~~~~~~~~-~a~l~~~~~ta~~al~~~~~-~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~ 195 (342)
+ |++ ++++ .|++..+++|||+++ +.++ +++|++|||+| +|++|++++|+|+..|+ +|++++++++++++++
T Consensus 164 i-P~~--l~~~~~Aa~~~~~~ta~~al-~~~~~~~~g~~VlV~G-aG~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~~~- 237 (380)
T 1vj0_A 164 V-SEK--DDLDVLAMAMCSGATAYHAF-DEYPESFAGKTVVIQG-AGPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE- 237 (380)
T ss_dssp E-CTT--SCHHHHHHHTTHHHHHHHHH-HTCSSCCBTCEEEEEC-CSHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-
T ss_pred C-CCC--CChHHhHhhhcHHHHHHHHH-HhcCCCCCCCEEEEEC-cCHHHHHHHHHHHHcCCceEEEEcCCHHHHHHHH-
Confidence 9 999 5554 566666999999999 5578 99999999999 69999999999999995 9999999999999999
Q ss_pred HcCCCeeEecC---CchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceec-cccCCCCccccchH
Q 019332 196 KFGFDEAFNYK---EEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMIS-QYNLDRPEGVHNLM 269 (342)
Q Consensus 196 ~~g~~~v~~~~---~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~-~~~~~~~~~~~~~~ 269 (342)
++|++.+++++ +. ++.+.+++.+++ ++|++|||+|+ ..+..++++|+++|+++.+|... +. ....+..
T Consensus 238 ~lGa~~vi~~~~~~~~-~~~~~v~~~~~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~~-----~~~~~~~ 311 (380)
T 1vj0_A 238 EIGADLTLNRRETSVE-ERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQD-----PVPFKVY 311 (380)
T ss_dssp HTTCSEEEETTTSCHH-HHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCCC-----CEEECHH
T ss_pred HcCCcEEEeccccCcc-hHHHHHHHHhCCCCCcEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCCCC-----CeeEchH
Confidence 99999999998 66 888999999987 89999999998 68999999999999999999765 31 1223444
Q ss_pred H-HHhcceeeecceecccccchHHHHHHHHHHHHc--CCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 270 Y-LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKE--GKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 270 ~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
. ++.+++++.++.... .+.++++++++.+ |.+++.+..+|+|+++++|++.+.+++.. |+||+++
T Consensus 312 ~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~-Kvvl~~~ 379 (380)
T 1vj0_A 312 EWLVLKNATFKGIWVSD-----TSHFVKTVSITSRNYQLLSKLITHRLPLKEANKALELMESREAL-KVILYPE 379 (380)
T ss_dssp HHTTTTTCEEEECCCCC-----HHHHHHHHHHHHTCHHHHGGGCCEEEEGGGHHHHHHHHHHTSCS-CEEEECC
T ss_pred HHHHhCCeEEEEeecCC-----HHHHHHHHHHHHhhcCCeeeEEEEEEeHHHHHHHHHHHhcCCCc-eEEEEeC
Confidence 5 678899998876544 6778999999999 99988888899999999999999998887 9999875
|
| >1pl8_A Human sorbitol dehydrogenase; NAD, oxidoreductase; HET: NAD; 1.90A {Homo sapiens} SCOP: b.35.1.2 c.2.1.1 PDB: 1pl7_A 1pl6_A* 3qe3_A | Back alignment and structure |
|---|
Probab=100.00 E-value=3.5e-50 Score=362.58 Aligned_cols=307 Identities=17% Similarity=0.176 Sum_probs=256.4
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-C--CccccCCCCCccccc
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-G--SYVESFKPGMPISGY 80 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-~--~~~~p~~~G~e~~G~ 80 (342)
+|+|||+++.++ + .+++++ +|.| +++++||+|||.++|||++|++.+.+.. . ...+|.++|||++|
T Consensus 5 ~~~mka~~~~~~--~-----~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G- 73 (356)
T 1pl8_A 5 KPNNLSLVVHGP--G-----DLRLEN--YPIP-EPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASG- 73 (356)
T ss_dssp CCCCEEEEEEET--T-----EEEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEE-
T ss_pred ccCceEEEEecC--C-----cEEEEE--ccCC-CCCCCeEEEEEEEeeeCHHHHHHHcCCCCCCccCCCCcccccceEE-
Confidence 367899999876 3 356655 5556 4589999999999999999998887532 1 12468999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccch
Q 019332 81 GVAKVLDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYY 129 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~ 129 (342)
+|+++|++|++|++||||++ .|+|+||++++.+.++++ |++ ++++
T Consensus 74 -~V~~vG~~V~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~--l~~~ 149 (356)
T 1pl8_A 74 -TVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKL-PDN--VTFE 149 (356)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTT--SCHH
T ss_pred -EEEEECCCCCCCCCCCEEEEeccCCCCCChHHHCcCcccCCCccccCcCCCCCccccEEEeehHHEEEC-cCC--CCHH
Confidence 99999999999999999986 278999999999999999 999 5554
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecC--
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYK-- 206 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~-- 206 (342)
.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|++++++++
T Consensus 150 ~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~~~~~ 226 (356)
T 1pl8_A 150 EGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQISKE 226 (356)
T ss_dssp HHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEECSSC
T ss_pred HHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-HhCCCEEEcCccc
Confidence 333446889999999 6789999999999996 9999999999999999 9999999999999999 99999999998
Q ss_pred -CchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 207 -EEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 207 -~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
.. ++.+.+++.+++++|++||++|+ ..+..++++|+++|+++.+|.... ....+...++.+++++.++...
T Consensus 227 ~~~-~~~~~i~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~~ 299 (356)
T 1pl8_A 227 SPQ-EIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSE------MTTVPLLHAAIREVDIKGVFRY 299 (356)
T ss_dssp CHH-HHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCS------CCCCCHHHHHHTTCEEEECCSC
T ss_pred ccc-hHHHHHHHHhCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEecCCC------CCccCHHHHHhcceEEEEeccc
Confidence 35 78888888776689999999998 578999999999999999987332 1233456677889998886542
Q ss_pred ccccchHHHHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcCCccceEEEEecCC
Q 019332 285 DYYHLYPKFLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAPE 342 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~~ 342 (342)
.+.++++++++.+|+++ +.+..+|+|+++++|++.+.++ ..||+|++++++
T Consensus 300 ------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~-~~gKvvi~~~~~ 352 (356)
T 1pl8_A 300 ------CNTWPVAISMLASKSVNVKPLVTHRFPLEKALEAFETFKKG-LGLKIMLKCDPS 352 (356)
T ss_dssp ------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHTT-CCSEEEEECCTT
T ss_pred ------HHHHHHHHHHHHcCCCChHHheEEEecHHHHHHHHHHHhCC-CceEEEEeCCCC
Confidence 23478899999999975 5667788999999999999988 789999998653
|
| >1e3j_A NADP(H)-dependent ketose reductase; oxidoreductase, fructose reduction; 2.3A {Bemisia argentifolii} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=3.6e-50 Score=362.05 Aligned_cols=307 Identities=16% Similarity=0.157 Sum_probs=254.9
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccC-CC--CccccCCCCCccccc
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI-KG--SYVESFKPGMPISGY 80 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~-~~--~~~~p~~~G~e~~G~ 80 (342)
+++|||+++.++ + .+++++ +|.| +++++||+|||.++|||++|++.+.+. ++ ...+|.++|||++|
T Consensus 2 ~~~mka~~~~~~--~-----~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~~~~~~~p~v~G~E~~G- 70 (352)
T 1e3j_A 2 ASDNLSAVLYKQ--N-----DLRLEQ--RPIP-EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASG- 70 (352)
T ss_dssp --CCEEEEEEET--T-----EEEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEE-
T ss_pred cccCEEEEEEcC--C-----cEEEEE--ecCC-CCCCCeEEEEEEEEEEChhhHHHHcCCCCccccCCCCccccccceE-
Confidence 347899999876 3 356655 5556 458999999999999999999887743 22 12468999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCcceeecCCCCCccch
Q 019332 81 GVAKVLDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLSYY 129 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~ 129 (342)
+|+++|++|++|++||||++ .|+|+||++++++.++++ |++ ++++
T Consensus 71 -~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~--~~~~ 146 (352)
T 1e3j_A 71 -TVVKVGKNVKHLKKGDRVAVEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL-PDN--VSLE 146 (352)
T ss_dssp -EEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTT--SCHH
T ss_pred -EEEEeCCCCCCCCCCCEEEEcCcCCCCCChhhhCcCcccCCCCcccCcCCCCccceeEEEeChHHeEEC-cCC--CCHH
Confidence 99999999999999999986 278999999999999999 999 5554
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC-c
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-E 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~-~ 208 (342)
.|++..++.|||+++ +.+++++|++|||+|+ |++|++++|+|+..|++|++++++++++++++ ++|++.++++++ .
T Consensus 147 ~aa~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~~~ 223 (352)
T 1e3j_A 147 EGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVDPAK 223 (352)
T ss_dssp HHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECCTTT
T ss_pred HHHhhchHHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHH-HhCCCEEEcCcccc
Confidence 344446889999999 6789999999999997 99999999999999999999999999999999 999999999985 5
Q ss_pred hhHHHHHHHHCC---C-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeeccee
Q 019332 209 PDLNEALKRYFP---E-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV 283 (342)
Q Consensus 209 ~~~~~~i~~~~~---~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (342)
++.+.+++.++ + ++|++||++|+ ..+..++++|+++|+++.+|.... ....+...++.+++++.++..
T Consensus 224 -~~~~~i~~~~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~~~~~i~g~~~ 296 (352)
T 1e3j_A 224 -EEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSVFR 296 (352)
T ss_dssp -SCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEECCS
T ss_pred -cHHHHHHHHhccccCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CccccHHHHHhcCcEEEEecc
Confidence 77788888775 4 89999999998 578999999999999999987432 122345667788898887654
Q ss_pred cccccchHHHHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcCC-ccceEEEEecC
Q 019332 284 RDYYHLYPKFLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSGR-NVGKQVVAVAP 341 (342)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~~-~~gkvvv~~~~ 341 (342)
. .+.++++++++.+|+++ +.+..+|+|+++++|++.+.+++ ..||+|+++++
T Consensus 297 ~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 351 (352)
T 1e3j_A 297 Y------CNDYPIALEMVASGRCNVKQLVTHSFKLEQTVDAFEAARKKADNTIKVMISCRQ 351 (352)
T ss_dssp C------SSCHHHHHHHHHTTSCCCGGGEEEEEEGGGHHHHHHHHHHCCTTCSEEEEECCC
T ss_pred c------hHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCCCceEEEEecCC
Confidence 2 23478899999999875 55677889999999999999987 68999998864
|
| >4a0s_A Octenoyl-COA reductase/carboxylase; oxidoreductase, transferase, cinnabaramide PKS biosynthesis; HET: CO8 NAP; 1.90A {Streptomyces SP} PDB: 4a10_A | Back alignment and structure |
|---|
Probab=100.00 E-value=2.9e-50 Score=373.87 Aligned_cols=319 Identities=21% Similarity=0.184 Sum_probs=264.1
Q ss_pred CccccccEEEEecccCC---------CCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccc-----------
Q 019332 2 PEMVRNKQVILKDYVSG---------FPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMT----------- 61 (342)
Q Consensus 2 ~~~~~~~a~~~~~~~~g---------~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~----------- 61 (342)
++|.+|||+++.++ + ....+.+++++.+. | .++++||+|||.++|||++|++...
T Consensus 20 ~~p~tmkA~v~~~~--~~~~~~~~~~~~~~~~l~~~e~p~--P-~~~~~eVlVrV~a~gic~sD~~~~~~~~~~~~~~~~ 94 (447)
T 4a0s_A 20 PVPDTYLALHLRAE--DADMFKGVADKDVRKSLRLGEVPM--P-ELAPDEVLVAVMASSINYNTVWSAMFEPIPTFHFLK 94 (447)
T ss_dssp CCCSEEEEEEEEGG--GTTTTTTCSSCCHHHHCEEEEEEC--C-CCCTTEEEEEEEEEECCHHHHHHHTTCSSCHHHHHH
T ss_pred CCChhheeeeeecc--ccccccccccCCCCCCceEEeccC--C-CCCCCeEEEEEEEEEECcHHhhhhccCcccchhhhh
Confidence 35678999999998 5 11113567766554 4 4589999999999999999975321
Q ss_pred -----cCCC-Ccccc-CCCCCcccccEEEEEecCCCCCCCCCCEEEe------------------------------ccc
Q 019332 62 -----NIKG-SYVES-FKPGMPISGYGVAKVLDSENPEFKKGDLVWG------------------------------MTG 104 (342)
Q Consensus 62 -----~~~~-~~~~p-~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~------------------------------~g~ 104 (342)
+.+. ...+| .++|||++| +|+++|++|++|++||+|++ .|+
T Consensus 95 ~~~~~g~~~~~~~~P~~v~GhE~~G--~V~~vG~~V~~~~vGDrV~~~~~~~~~~~~~~~~~~~~c~~~~~~G~~~~~G~ 172 (447)
T 4a0s_A 95 QNARQGGWATRHDQPYHVLGSDCSG--VVVRTGIGVRRWKPGDHVIVHPAHVDEQEPATHGDGMLGTEQRAWGFETNFGG 172 (447)
T ss_dssp HHHTTCGGGGGGCCSEEECCSCEEE--EEEEECTTCCSCCTTCEEEECSEECCTTSGGGGTCTTCSTTCEETTTTSSSCS
T ss_pred hhcccCccccccCCCCcccccceeE--EEEEECCCCCCCCCCCEEEEecCcCcCcccccccccccccccccccccCCCCc
Confidence 1111 12345 699999776 99999999999999999997 389
Q ss_pred cceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh--cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEE
Q 019332 105 WEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV--CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVG 182 (342)
Q Consensus 105 ~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~--~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~ 182 (342)
|+||++++++.++++ |+++++. ++|+++.+++|||+++... +++++|++|||+|++|++|++++|+|+..|++|++
T Consensus 173 ~aey~~v~~~~~~~i-P~~ls~~-~aA~l~~~~~tA~~al~~~~~~~~~~g~~VlV~GasG~iG~~a~qla~~~Ga~vi~ 250 (447)
T 4a0s_A 173 LAEYGVVRASQLLPK-PAHLTWE-EAAVSPLCAGTAYRMLVSDRGAQMKQGDIVLIWGASGGLGSYAIQFVKNGGGIPVA 250 (447)
T ss_dssp SBSEEEEEGGGEEEC-CTTSCHH-HHHTSHHHHHHHHHHHTSTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEE
T ss_pred eeeeeecCHHHcEEC-CCCCCHH-HHHHhHHHHHHHHHHHHhhhccCCCCCCEEEEECCCCHHHHHHHHHHHHcCCEEEE
Confidence 999999999999999 9994444 3777888999999999643 88999999999999999999999999999999999
Q ss_pred EeCChhhHHHHHHHcCCCeeEecCCchh------------------HHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhh
Q 019332 183 SAGSKDKIDLLKNKFGFDEAFNYKEEPD------------------LNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKI 244 (342)
Q Consensus 183 ~~~s~~~~~~~~~~~g~~~v~~~~~~~~------------------~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~ 244 (342)
++++++++++++ ++|++.++++.+. + +.+.+++.+++++|++|||+|+..+..+++++++
T Consensus 251 ~~~~~~~~~~~~-~lGa~~~i~~~~~-~~~~~~~~~~~~~~~~~~~~~~~v~~~~g~g~Dvvid~~G~~~~~~~~~~l~~ 328 (447)
T 4a0s_A 251 VVSSAQKEAAVR-ALGCDLVINRAEL-GITDDIADDPRRVVETGRKLAKLVVEKAGREPDIVFEHTGRVTFGLSVIVARR 328 (447)
T ss_dssp EESSHHHHHHHH-HTTCCCEEEHHHH-TCCTTGGGCHHHHHHHHHHHHHHHHHHHSSCCSEEEECSCHHHHHHHHHHSCT
T ss_pred EeCCHHHHHHHH-hcCCCEEEecccc-cccccccccccccchhhhHHHHHHHHHhCCCceEEEECCCchHHHHHHHHHhc
Confidence 999999999998 9999998887543 3 3677888884489999999999889999999999
Q ss_pred CCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHH
Q 019332 245 HGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLI 324 (342)
Q Consensus 245 ~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~ 324 (342)
+|+++.+|...+. ........++.+++++.++.... .+.+.++++++.+|.+++.+..+|+|+++++|++
T Consensus 329 ~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~ 398 (447)
T 4a0s_A 329 GGTVVTCGSSSGY-----LHTFDNRYLWMKLKKIVGSHGAN-----HEEQQATNRLFESGAVVPAMSAVYPLAEAAEACR 398 (447)
T ss_dssp TCEEEESCCTTCS-----EEEEEHHHHHHTTCEEEECCSCC-----HHHHHHHHHHHHTTSSCCCEEEEEEGGGHHHHHH
T ss_pred CCEEEEEecCCCc-----ccccCHHHHHhCCCEEEecCCCC-----HHHHHHHHHHHHcCCcccceeEEEcHHHHHHHHH
Confidence 9999999975542 22345566778888888876554 4567789999999999999989999999999999
Q ss_pred HHHcCCccceEEEEecC
Q 019332 325 GLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 325 ~~~~~~~~gkvvv~~~~ 341 (342)
.+.+++..||+||.+.+
T Consensus 399 ~~~~~~~~GKvvv~~~~ 415 (447)
T 4a0s_A 399 VVQTSRQVGKVAVLCMA 415 (447)
T ss_dssp HHHTTCCSSEEEEESSC
T ss_pred HHhcCCCceEEEEEeCC
Confidence 99999999999998743
|
| >2cf5_A Atccad5, CAD, cinnamyl alcohol dehydrogenase; lignin biosynthesis, metal-binding, NADP, oxidoreductase, zinc; 2.0A {Arabidopsis thaliana} PDB: 2cf6_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=5.3e-50 Score=361.35 Aligned_cols=309 Identities=18% Similarity=0.175 Sum_probs=255.3
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCccccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGY 80 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~ 80 (342)
|..+|+|+++..... + +.+++++ +|.| .++++||+|||.++|||++|++.+.|.++...+|.++|||++|
T Consensus 4 m~~~m~~~a~~~~~~----~--~~l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G- 73 (357)
T 2cf5_A 4 MEAERKTTGWAARDP----S--GILSPYT--YTLR-ETGPEDVNIRIICCGICHTDLHQTKNDLGMSNYPMVPGHEVVG- 73 (357)
T ss_dssp --CCCEEEEEEECST----T--CCEEEEE--EECC-CCCTTEEEEEEEEEEECHHHHHHHTCTTTCCCSSBCCCCEEEE-
T ss_pred ccCcceeEEEEEccC----C--CCcEEEE--ecCC-CCCCCEEEEEEEEEeecchhhhhhcCCCCCCCCCeecCcceeE-
Confidence 555677777776543 3 3466665 4555 4589999999999999999999988865445678999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecCC
Q 019332 81 GVAKVLDSENPEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQHT 122 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p~ 122 (342)
+|+++|++|++|++||||++ .|+|+||++++++.++++ |+
T Consensus 74 -~V~~vG~~v~~~~vGdrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~ 151 (357)
T 2cf5_A 74 -EVVEVGSDVSKFTVGDIVGVGCLVGCCGGCSPCERDLEQYCPKKIWSYNDVYINGQPTQGGFAKATVVHQKFVVKI-PE 151 (357)
T ss_dssp -EEEEECSSCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCTTSCBCCCSSBSCEEEEGGGEEEC-CS
T ss_pred -EEEEECCCCCCCCCCCEEEEcCCCCCCCCChHHhCcCcccCCCccccccccccCCCCCCCccccEEEechhhEEEC-cC
Confidence 99999999999999999973 278999999999999999 99
Q ss_pred CCCccchhhccCCchhhHHHhhhhhcCCC-CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe
Q 019332 123 DVPLSYYTGILGMPGMTAYAGFYEVCSPK-QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE 201 (342)
Q Consensus 123 ~~~~~~~~a~l~~~~~ta~~al~~~~~~~-~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~ 201 (342)
++++. ++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++++|+++
T Consensus 152 ~ls~~-~aa~l~~~~~ta~~~l~~-~~~~~~g~~VlV~Ga-G~vG~~a~qlak~~Ga~Vi~~~~~~~~~~~~~~~lGa~~ 228 (357)
T 2cf5_A 152 GMAVE-QAAPLLCAGVTVYSPLSH-FGLKQPGLRGGILGL-GGVGHMGVKIAKAMGHHVTVISSSNKKREEALQDLGADD 228 (357)
T ss_dssp SCCHH-HHTGGGTHHHHHHHHHHH-TSTTSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSTTHHHHHHTTSCCSC
T ss_pred CCCHH-HhhhhhhhHHHHHHHHHh-cCCCCCCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeCChHHHHHHHHHcCCce
Confidence 94443 378899999999999954 6788 9999999996 999999999999999999999999999888766899999
Q ss_pred eEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeec
Q 019332 202 AFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEG 280 (342)
Q Consensus 202 v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 280 (342)
++++++. + .+++.++ ++|++|||+|+ ..+..++++++++|+++.+|...+. ....+.. ++.+++++.+
T Consensus 229 vi~~~~~-~---~~~~~~~-g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~-~~~~~~~i~g 297 (357)
T 2cf5_A 229 YVIGSDQ-A---KMSELAD-SLDYVIDTVPVHHALEPYLSLLKLDGKLILMGVINNP-----LQFLTPL-LMLGRKVITG 297 (357)
T ss_dssp EEETTCH-H---HHHHSTT-TEEEEEECCCSCCCSHHHHTTEEEEEEEEECSCCSSC-----CCCCHHH-HHHHTCEEEE
T ss_pred eeccccH-H---HHHHhcC-CCCEEEECCCChHHHHHHHHHhccCCEEEEeCCCCCC-----ccccCHH-HHhCccEEEE
Confidence 9998763 3 4555553 79999999998 5789999999999999999975432 1113334 7788999988
Q ss_pred ceecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 281 FLVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 281 ~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
+.... .+.++++++++.+|.+++.+ .+|||+++++|++.+.+++..||+|+++++
T Consensus 298 ~~~~~-----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 352 (357)
T 2cf5_A 298 SFIGS-----MKETEEMLEFCKEKGLSSII-EVVKMDYVNTAFERLEKNDVRYRFVVDVEG 352 (357)
T ss_dssp CCSCC-----HHHHHHHHHHHHHTTCCCCE-EEEEGGGHHHHHHHHHTTCSSSEEEEETTS
T ss_pred EccCC-----HHHHHHHHHHHHcCCCCCce-EEEeHHHHHHHHHHHHCCCCceEEEEeCCc
Confidence 76544 56788999999999999876 588999999999999999888999999864
|
| >3m6i_A L-arabinitol 4-dehydrogenase; medium chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 2.60A {Neurospora crassa} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.6e-50 Score=364.57 Aligned_cols=308 Identities=16% Similarity=0.082 Sum_probs=255.6
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeecccc--------CCCCCCcEEEEEEeeecCcccccccccCC---CCccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQ--------VPKGSNGVLLKNLYLSCDPYMRPRMTNIK---GSYVE 69 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p--------~~~~~~~VlIkv~~~~i~~~d~~~~~~~~---~~~~~ 69 (342)
|+++++|||+++..+ +.+++++ +|.| .+ +++||||||+++|||++|++.+.+.. ....+
T Consensus 3 ~~~~~~mka~~~~~~-------~~l~~~~--~~~P~~~~~~~~~~-~~~eVlVkv~a~gi~~~D~~~~~~~~~~~~~~~~ 72 (363)
T 3m6i_A 3 SSASKTNIGVFTNPQ-------HDLWISE--ASPSLESVQKGEEL-KEGEVTVAVRSTGICGSDVHFWKHGCIGPMIVEC 72 (363)
T ss_dssp --CCSCCEEEEECTT-------CCEEEEE--CSSCHHHHHHTCSC-CTTEEEEEEEEEECCHHHHHHHHHSBSSSCBCCS
T ss_pred CCCcccceeEEEeCC-------CcEEEEE--ecCCccccccCCCc-CCCeEEEEEeEEeecHhhHHHHcCCCCCCccCCC
Confidence 345688999999866 3356655 5656 44 89999999999999999998887432 12356
Q ss_pred cCCCCCcccccEEEEEecCCCCCCCCCCEEEe-------------------------------ccccceeEeecCCccee
Q 019332 70 SFKPGMPISGYGVAKVLDSENPEFKKGDLVWG-------------------------------MTGWEEYSLVTAPQLFK 118 (342)
Q Consensus 70 p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~-------------------------------~g~~~~~~~v~~~~~~~ 118 (342)
|.++|||++| +|+++|++|++|++||||++ .|+|+||++++++.+++
T Consensus 73 p~v~G~E~~G--~V~~vG~~v~~~~vGdrV~~~~~~~cg~C~~c~~g~~~~c~~~~~~g~~~~~G~~aey~~v~~~~~~~ 150 (363)
T 3m6i_A 73 DHVLGHESAG--EVIAVHPSVKSIKVGDRVAIEPQVICNACEPCLTGRYNGCERVDFLSTPPVPGLLRRYVNHPAVWCHK 150 (363)
T ss_dssp CEECCCEEEE--EEEEECTTCCSCCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEETTSTTSCCSCBSEEEEEGGGEEE
T ss_pred CcccCcceEE--EEEEECCCCCCCCCCCEEEEecccCCCCCHHHHCcCcccCCCccccCCCCCCccceeEEEEehhhEEE
Confidence 8999999776 99999999999999999985 27899999999999999
Q ss_pred ecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHc
Q 019332 119 IQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKF 197 (342)
Q Consensus 119 i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~ 197 (342)
+ |+ +++.. +|.+ .++.|||+++ +.+++++|++|||+|+ |++|++++|+|+..|++ |++++++++|+++++ ++
T Consensus 151 i-P~-~s~~~-aa~~-~~~~ta~~~l-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~~a~-~l 223 (363)
T 3m6i_A 151 I-GN-MSYEN-GAML-EPLSVALAGL-QRAGVRLGDPVLICGA-GPIGLITMLCAKAAGACPLVITDIDEGRLKFAK-EI 223 (363)
T ss_dssp C-TT-CCHHH-HHHH-HHHHHHHHHH-HHHTCCTTCCEEEECC-SHHHHHHHHHHHHTTCCSEEEEESCHHHHHHHH-HH
T ss_pred C-CC-CCHHH-HHhh-hHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh
Confidence 9 98 65552 5555 5889999999 6789999999999998 99999999999999996 999999999999999 88
Q ss_pred CCCeeEecC-----CchhHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHH
Q 019332 198 GFDEAFNYK-----EEPDLNEALKRYFPE-GIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMY 270 (342)
Q Consensus 198 g~~~v~~~~-----~~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~ 270 (342)
++.+++++ .. ++.+.+++.+++ ++|++|||+|++ .+..++++|+++|+++.+|..... ...+...
T Consensus 224 -~~~~~~~~~~~~~~~-~~~~~v~~~t~g~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~ 295 (363)
T 3m6i_A 224 -CPEVVTHKVERLSAE-ESAKKIVESFGGIEPAVALECTGVESSIAAAIWAVKFGGKVFVIGVGKNE------IQIPFMR 295 (363)
T ss_dssp -CTTCEEEECCSCCHH-HHHHHHHHHTSSCCCSEEEECSCCHHHHHHHHHHSCTTCEEEECCCCCSC------CCCCHHH
T ss_pred -chhcccccccccchH-HHHHHHHHHhCCCCCCEEEECCCChHHHHHHHHHhcCCCEEEEEccCCCC------ccccHHH
Confidence 76666654 23 789999999977 999999999995 789999999999999999975432 2245567
Q ss_pred HHhcceeeecceecccccchHHHHHHHHHHHHcCCce--eeeeeeeccccHHHHHHHHHcC-CccceEEEEecC
Q 019332 271 LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV--YVEDMAEGLESAPATLIGLFSG-RNVGKQVVAVAP 341 (342)
Q Consensus 271 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~~~~~~~~l~~~~~a~~~~~~~-~~~gkvvv~~~~ 341 (342)
++.+++++.++... .+.++++++++.+|.++ +.+..+|+|+++++|++.+.++ ...+|+|++.++
T Consensus 296 ~~~~~~~i~g~~~~------~~~~~~~~~l~~~g~i~~~~~i~~~~~l~~~~~A~~~~~~~~~~~~Kvvi~~~~ 363 (363)
T 3m6i_A 296 ASVREVDLQFQYRY------CNTWPRAIRLVENGLVDLTRLVTHRFPLEDALKAFETASDPKTGAIKVQIQSLE 363 (363)
T ss_dssp HHHHTCEEEECCSC------SSCHHHHHHHHHTTSSCCGGGEEEEEEGGGHHHHHHHHHCGGGCCSEEEEECC-
T ss_pred HHhcCcEEEEccCC------HHHHHHHHHHHHhCCCChHHceeeeeeHHHHHHHHHHHhccCCCeEEEEEecCC
Confidence 78888988886543 34578899999999994 5577889999999999999998 577899999864
|
| >1uuf_A YAHK, zinc-type alcohol dehydrogenase-like protein YAHK; oxidoreductase, zinc binding, oxydoreductase, metal-binding; 1.76A {Escherichia coli} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=7.7e-50 Score=361.36 Aligned_cols=305 Identities=19% Similarity=0.218 Sum_probs=254.2
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~ 84 (342)
++|+|+...++ +.+ +++++ +|.| +++++||||||.++|||++|++.+.|.++...+|.++|||++| +|+
T Consensus 21 ~~~~a~~~~~~--~~~----l~~~~--~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G--~V~ 89 (369)
T 1uuf_A 21 LKIKAVGAYSA--KQP----LEPMD--ITRR-EPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG--RVV 89 (369)
T ss_dssp --CEEEEBSST--TSC----CEEEE--CCCC-CCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEE--EEE
T ss_pred ceEEEEEEcCC--CCC----cEEEE--ecCC-CCCCCeEEEEEEEEeecHHHHHHhcCCCCCCCCCeecccCceE--EEE
Confidence 56788877655 433 67765 5555 4589999999999999999999988865444578999999776 999
Q ss_pred EecCCCCCCCCCCEEEe---------------------------------------ccccceeEeecCCcceeecCCC-C
Q 019332 85 VLDSENPEFKKGDLVWG---------------------------------------MTGWEEYSLVTAPQLFKIQHTD-V 124 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~---------------------------------------~g~~~~~~~v~~~~~~~i~p~~-~ 124 (342)
++|++|++|++||||++ .|+|+||++++++.++++ |++ +
T Consensus 90 ~vG~~V~~~~vGDrV~~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~g~~~~G~~aeyv~v~~~~~~~~-P~~~l 168 (369)
T 1uuf_A 90 AVGDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRI-RHPQE 168 (369)
T ss_dssp EECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEEC-CSCGG
T ss_pred EECCCCCCCCCCCEEEEccCCCCCCCCcccCCCCcccCcchhcccccccccCCCCCCCcccceEEEcchhEEEC-CCCCC
Confidence 99999999999999983 178999999999999999 998 7
Q ss_pred CccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEe
Q 019332 125 PLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFN 204 (342)
Q Consensus 125 ~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~ 204 (342)
++. ++|+++++++|||+++.+ .++++|++|||+|+ |++|++++|+|+..|++|++++++++++++++ ++|++.++|
T Consensus 169 s~~-~aa~l~~~~~tA~~al~~-~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~Vi~~~~~~~~~~~a~-~lGa~~vi~ 244 (369)
T 1uuf_A 169 QLA-AVAPLLCAGITTYSPLRH-WQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVN 244 (369)
T ss_dssp GHH-HHGGGGTHHHHHHHHHHH-TTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEE
T ss_pred CHH-HhhhhhhhHHHHHHHHHh-cCCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEec
Confidence 766 388899999999999965 68999999999997 99999999999999999999999999999999 899999999
Q ss_pred cCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeeccee
Q 019332 205 YKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV 283 (342)
Q Consensus 205 ~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (342)
+++. ++.+. .. +++|++|||+|+ ..+..++++++++|+++.+|...+. ....+...++.+++++.++..
T Consensus 245 ~~~~-~~~~~---~~-~g~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~ 314 (369)
T 1uuf_A 245 SRNA-DEMAA---HL-KSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIAGSMI 314 (369)
T ss_dssp TTCH-HHHHT---TT-TCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCS
T ss_pred cccH-HHHHH---hh-cCCCEEEECCCCHHHHHHHHHHhccCCEEEEeccCCCC-----ccccCHHHHHhCCcEEEEeec
Confidence 9875 54333 33 479999999998 4789999999999999999875432 112345567788999988765
Q ss_pred cccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 284 RDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
.. .+.++++++++.+|.+++.+. .|+|+++++|++.+.+++..||+|+++++
T Consensus 315 ~~-----~~~~~~~~~l~~~g~i~~~i~-~~~l~~~~~A~~~~~~~~~~gKvvi~~~~ 366 (369)
T 1uuf_A 315 GG-----IPETQEMLDFCAEHGIVADIE-MIRADQINEAYERMLRGDVKYRFVIDNRT 366 (369)
T ss_dssp CC-----HHHHHHHHHHHHHHTCCCCEE-EECGGGHHHHHHHHHTTCSSSEEEEEGGG
T ss_pred CC-----HHHHHHHHHHHHhCCCCcceE-EEcHHHHHHHHHHHHcCCCceEEEEecCC
Confidence 44 567889999999999998765 68999999999999998888999998853
|
| >2dq4_A L-threonine 3-dehydrogenase; NAD-dependent, oxidoreductase, structural genomics, NPPSFA; HET: MES; 2.50A {Thermus thermophilus} PDB: 2ejv_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-50 Score=362.35 Aligned_cols=304 Identities=18% Similarity=0.159 Sum_probs=257.3
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~v 83 (342)
|||+++.++ |.| +++++ +|.| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++| +|
T Consensus 1 Mka~~~~~~--g~~----l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E~~G--~V 69 (343)
T 2dq4_A 1 MRALAKLAP--EEG----LTLVD--RPVP-EPGPGEILVRVEAASICGTDLHIWKWDAWARGRIRPPLVTGHEFSG--VV 69 (343)
T ss_dssp CEEEEECSS--SSS----CEEEE--CCCC-CCCTTEEEEEEEEEECCHHHHHHHTTCHHHHHHCCSSEECCCEEEE--EE
T ss_pred CeEEEEeCC--CCc----EEEEe--ccCC-CCCCCEEEEEEEEEeechhhHHHHcCCCCccccCCCCCcCCccceE--EE
Confidence 589999988 654 56765 5555 45899999999999999999999888543 24578999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhcc
Q 019332 84 KVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGIL 133 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l 133 (342)
+++|++|++|++||||++. |+|+||++++++.++++ |++ ++++.|++
T Consensus 70 ~~vG~~v~~~~vGdrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~--~~~~~aa~ 146 (343)
T 2dq4_A 70 EAVGPGVRRPQVGDHVSLESHIVCHACPACRTGNYHVCLNTQILGVDRDGGFAEYVVVPAENAWVN-PKD--LPFEVAAI 146 (343)
T ss_dssp EEECTTCCSSCTTCEEEECCEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGEEEE-CTT--SCHHHHTT
T ss_pred EEECCCCCcCCCCCEEEECCCCCCCCChhhhCcCcccCCCcceecCCCCCcceeEEEEchHHeEEC-CCC--CCHHHHHh
Confidence 9999999999999999972 78999999999999999 999 55543333
Q ss_pred CCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
..++.|||+++.+.+++ +|++|||+|+ |++|++++|+|+..|+ +|++++++++++++++ ++ +++++++++. ++.
T Consensus 147 ~~~~~ta~~~l~~~~~~-~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~~Vi~~~~~~~~~~~~~-~l-a~~v~~~~~~-~~~ 221 (343)
T 2dq4_A 147 LEPFGNAVHTVYAGSGV-SGKSVLITGA-GPIGLMAAMVVRASGAGPILVSDPNPYRLAFAR-PY-ADRLVNPLEE-DLL 221 (343)
T ss_dssp HHHHHHHHHHHHSTTCC-TTSCEEEECC-SHHHHHHHHHHHHTTCCSEEEECSCHHHHGGGT-TT-CSEEECTTTS-CHH
T ss_pred hhHHHHHHHHHHHhCCC-CCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEECCCHHHHHHHH-Hh-HHhccCcCcc-CHH
Confidence 36788999999647889 9999999999 9999999999999999 9999999999999998 88 9999999887 889
Q ss_pred HHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccch-HHHHhcceeeecceecccccch
Q 019332 213 EALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNL-MYLVTKRVRMEGFLVRDYYHLY 290 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~ 290 (342)
+.+++.+++++|++||++|+ ..+..++++++++|+++.+|...+ ....+. ..++.+++++.++.... .
T Consensus 222 ~~~~~~~~~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~------~~~~~~~~~~~~~~~~i~g~~~~~----~ 291 (343)
T 2dq4_A 222 EVVRRVTGSGVEVLLEFSGNEAAIHQGLMALIPGGEARILGIPSD------PIRFDLAGELVMRGITAFGIAGRR----L 291 (343)
T ss_dssp HHHHHHHSSCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCSS------CEEECHHHHTGGGTCEEEECCSCC----T
T ss_pred HHHHHhcCCCCCEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCC------CceeCcHHHHHhCceEEEEeecCC----C
Confidence 99998883389999999998 789999999999999999987432 123344 56678899988875431 2
Q ss_pred HHHHHHHHHHHHcCCc--eeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 291 PKFLEMIIPHIKEGKI--VYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 291 ~~~~~~~~~~~~~g~~--~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.+.++++++++.+|.+ ++.+..+|+|+++++|++.+.+++. ||+|++++
T Consensus 292 ~~~~~~~~~l~~~g~~~~~~~i~~~~~l~~~~~A~~~~~~~~~-gKvv~~~~ 342 (343)
T 2dq4_A 292 WQTWMQGTALVYSGRVDLSPLLTHRLPLSRYREAFGLLASGQA-VKVILDPK 342 (343)
T ss_dssp THHHHHHHHHHHHTSSCCGGGEEEEEEGGGHHHHHHHHHHSSC-SEEEEETT
T ss_pred HHHHHHHHHHHHcCCCChHHheeEEecHHHHHHHHHHHhcCCc-eEEEEeeC
Confidence 5678899999999995 5667788999999999999998877 99999875
|
| >3fpc_A NADP-dependent alcohol dehydrogenase; oxydoreductase, bacterial alcohol dehydrogenase, domain exchange, chimera, metal-binding; 1.40A {Thermoanaerobacter brockii} PDB: 2nvb_A* 1ykf_A* 1bxz_A* 3ftn_A 3fsr_A 1y9a_A* 2oui_A* 3fpl_A* 1jqb_A 1kev_A* 1ped_A 2b83_A | Back alignment and structure |
|---|
Probab=100.00 E-value=7e-50 Score=360.19 Aligned_cols=309 Identities=17% Similarity=0.152 Sum_probs=256.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCccccc-ccccCCCCccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRP-RMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~-~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ +. +++++ +|.| .++++||+|||.+++||++|++ ...|..+ ..+|.++|||++| +|++
T Consensus 1 MkA~~~~~~--~~-----~~~~e--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~~g~~~-~~~p~v~G~E~~G--~V~~ 67 (352)
T 3fpc_A 1 MKGFAMLSI--GK-----VGWIE--KEKP-APGPFDAIVRPLAVAPCTSDIHTVFEGAIG-ERHNMILGHEAVG--EVVE 67 (352)
T ss_dssp CEEEEEEET--TE-----EEEEE--CCCC-CCCTTCEEEEEEEEECCHHHHHHHHSCTTC-CCSSEECCCEEEE--EEEE
T ss_pred CeEEEEccC--CC-----ceEEe--CCCC-CCCCCeEEEEeCEEeEcccchHHHhCCCCC-CCCCcccCCcceE--EEEE
Confidence 699999988 53 35654 5666 4589999999999999999998 4466543 3568999999776 9999
Q ss_pred ecCCCCCCCCCCEEEe---------------------------------ccccceeEeecCC--cceeecCCCCCccchh
Q 019332 86 LDSENPEFKKGDLVWG---------------------------------MTGWEEYSLVTAP--QLFKIQHTDVPLSYYT 130 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~v~~~--~~~~i~p~~~~~~~~~ 130 (342)
+|++|++|++||||++ .|+|+||+.++++ .++++ |+++++. ++
T Consensus 68 vG~~v~~~~vGdrV~~~~~~~c~~c~~c~~g~~~~~~~~~~~~~~~~~~~G~~aey~~v~~~~~~~~~i-P~~~~~~-~a 145 (352)
T 3fpc_A 68 VGSEVKDFKPGDRVVVPAITPDWRTSEVQRGYHQHSGGMLAGWKFSNVKDGVFGEFFHVNDADMNLAHL-PKEIPLE-AA 145 (352)
T ss_dssp ECTTCCSCCTTCEEEECSBCCCSSSHHHHTTCGGGTTSTTTTBCBTTTBCCSSBSCEEESSHHHHCEEC-CTTSCHH-HH
T ss_pred ECCCCCcCCCCCEEEEccccCCCCchhhcCCCcCCccccccccccccCCCCcccceEEeccccCeEEEC-CCCCCHH-HH
Confidence 9999999999999984 2789999999986 89999 9994443 27
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
|.++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|+++++|+++.
T Consensus 146 a~~~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~a~qla~~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~- 221 (352)
T 3fpc_A 146 VMIPDMMTTGFHGA-ELANIKLGDTVCVIGI-GPVGLMSVAGANHLGAGRIFAVGSRKHCCDIAL-EYGATDIINYKNG- 221 (352)
T ss_dssp TTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSSEEEECCCHHHHHHHH-HHTCCEEECGGGS-
T ss_pred hhccchhHHHHHHH-HhcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCcEEEEECCCHHHHHHHH-HhCCceEEcCCCc-
Confidence 77889999999999 6789999999999996 9999999999999999 8999999999999999 9999999999887
Q ss_pred hHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
++.+.+++.+++ ++|++|||+|+ ..+..++++|+++|+++.+|....... ............++.++.++....
T Consensus 222 ~~~~~v~~~t~g~g~D~v~d~~g~~~~~~~~~~~l~~~G~~v~~G~~~~~~~--~~~~~~~~~~~~~~~~i~g~~~~~-- 297 (352)
T 3fpc_A 222 DIVEQILKATDGKGVDKVVIAGGDVHTFAQAVKMIKPGSDIGNVNYLGEGDN--IDIPRSEWGVGMGHKHIHGGLCPG-- 297 (352)
T ss_dssp CHHHHHHHHTTTCCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSCSE--EEEETTTTGGGTBCEEEEEBCCCC--
T ss_pred CHHHHHHHHcCCCCCCEEEECCCChHHHHHHHHHHhcCCEEEEecccCCCCc--eecchhHhhhhccccEEEEeeccC--
Confidence 999999999988 89999999999 789999999999999999997543200 000111122334677777654321
Q ss_pred cchHHHHHHHHHHHHcCCceee--eeeeec-cccHHHHHHHHHcCCc-cceEEEEec
Q 019332 288 HLYPKFLEMIIPHIKEGKIVYV--EDMAEG-LESAPATLIGLFSGRN-VGKQVVAVA 340 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~~~~~--~~~~~~-l~~~~~a~~~~~~~~~-~gkvvv~~~ 340 (342)
..+.++++++++.+|.+++. ++.+|+ |+++++|++.+.+++. .+|+|++++
T Consensus 298 --~~~~~~~~~~l~~~g~i~~~~~i~~~~~gl~~~~~A~~~~~~~~~~~~Kvvi~~~ 352 (352)
T 3fpc_A 298 --GRLRMERLIDLVFYKRVDPSKLVTHVFRGFDNIEKAFMLMKDKPKDLIKPVVILA 352 (352)
T ss_dssp --HHHHHHHHHHHHHTTSCCGGGGEEEEEESTTHHHHHHHHHHSCCTTCSEEEEECC
T ss_pred --chhHHHHHHHHHHcCCCChhHhheeeCCCHHHHHHHHHHHHhCCCCcEEEEEEeC
Confidence 25668999999999999975 677888 9999999999998764 489999874
|
| >2h6e_A ADH-4, D-arabinose 1-dehydrogenase; rossman fold, medium chain alcohol dehydrogenase, oxidoreduc; 1.80A {Sulfolobus solfataricus} | Back alignment and structure |
|---|
Probab=100.00 E-value=6.2e-50 Score=359.43 Aligned_cols=300 Identities=21% Similarity=0.216 Sum_probs=236.3
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC--CccccCCCCCcccccEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--SYVESFKPGMPISGYGV 82 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--~~~~p~~~G~e~~G~g~ 82 (342)
.+|||+++.++ |.+ +++++.+ .| .++++||+|||.++|||++|++.+.|.++ ...+|.++|||++| +
T Consensus 2 ~~mka~~~~~~--g~~----l~~~~~~--~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~p~i~G~E~~G--~ 70 (344)
T 2h6e_A 2 VKSKAALLKKF--SEP----LSIEDVN--IP-EPQGEEVLIRIGGAGVCRTDLRVWKGVEAKQGFRLPIILGHENAG--T 70 (344)
T ss_dssp EEEEBCEECSC--CC---------EEE--EC-CCCTTCEEEEEEEEECCHHHHHHHTTSCCCTTCCSSEECCCCEEE--E
T ss_pred ceeEEEEEecC--CCC----CeEEEee--CC-CCCCCEEEEEEEEEEechhhHHHHcCCCcccCCCCCccccccceE--E
Confidence 46899999988 644 5676544 45 45899999999999999999999988654 34578999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec------------------------------cccceeEeec-CCcceeecCCCCCccch-h
Q 019332 83 AKVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVT-APQLFKIQHTDVPLSYY-T 130 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~-~~~~~~i~p~~~~~~~~-~ 130 (342)
|+++|++ ++|++||||++. |+|+||++++ ++.++++ ++ ++++ +
T Consensus 71 V~~vG~~-~~~~~GdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i--~~--l~~~~a 145 (344)
T 2h6e_A 71 IVEVGEL-AKVKKGDNVVVYATWGDLTCRYCREGKFNICKNQIIPGQTTNGGFSEYMLVKSSRWLVKL--NS--LSPVEA 145 (344)
T ss_dssp EEEECTT-CCCCTTCEEEECSCBCCSCSTTGGGTCGGGCTTCBCBTTTBCCSSBSEEEESCGGGEEEE--SS--SCHHHH
T ss_pred EEEECCC-CCCCCCCEEEECCCCCCCCChhhhCCCcccCCCccccccccCCcceeeEEecCcccEEEe--CC--CCHHHh
Confidence 9999999 999999999753 7899999999 9999999 55 5554 7
Q ss_pred hccCCchhhHHHhhhhh----cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHcCCCeeEe
Q 019332 131 GILGMPGMTAYAGFYEV----CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKFGFDEAFN 204 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~----~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~g~~~v~~ 204 (342)
|+++++++|||+++.+. +++ +|++|||+|+ |++|++++|+|+.. |++|++++++++|+++++ ++|+++++|
T Consensus 146 a~l~~~~~ta~~al~~~~~~~~~~-~g~~VlV~Ga-G~vG~~aiqlak~~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~vi~ 222 (344)
T 2h6e_A 146 APLADAGTTSMGAIRQALPFISKF-AEPVVIVNGI-GGLAVYTIQILKALMKNITIVGISRSKKHRDFAL-ELGADYVSE 222 (344)
T ss_dssp GGGGTHHHHHHHHHHHHHHHHTTC-SSCEEEEECC-SHHHHHHHHHHHHHCTTCEEEEECSCHHHHHHHH-HHTCSEEEC
T ss_pred hhhhhhhHHHHHHHHhhhhcccCC-CCCEEEEECC-CHHHHHHHHHHHHhcCCCEEEEEeCCHHHHHHHH-HhCCCEEec
Confidence 78999999999999764 388 9999999998 99999999999999 999999999999999999 999999998
Q ss_pred cCC-chhHHHHHHHHCCC-CccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecc
Q 019332 205 YKE-EPDLNEALKRYFPE-GIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGF 281 (342)
Q Consensus 205 ~~~-~~~~~~~i~~~~~~-~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
+++ . ++. ++++++ ++|++|||+|+. .+..++++++++|+++.+|...+. ...+...++.+++++.++
T Consensus 223 ~~~~~-~~~---~~~~~g~g~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~g~ 292 (344)
T 2h6e_A 223 MKDAE-SLI---NKLTDGLGASIAIDLVGTEETTYNLGKLLAQEGAIILVGMEGKR------VSLEAFDTAVWNKKLLGS 292 (344)
T ss_dssp HHHHH-HHH---HHHHTTCCEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSSC------CCCCHHHHHHTTCEEEEC
T ss_pred cccch-HHH---HHhhcCCCccEEEECCCChHHHHHHHHHhhcCCEEEEeCCCCCC------cccCHHHHhhCCcEEEEE
Confidence 865 4 443 444445 899999999995 899999999999999999875431 123455677889999887
Q ss_pred eecccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 282 LVRDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.... .+.++++++++.+|.+++.+ .+|+|+++++|++.+.+++..||+|+++
T Consensus 293 ~~~~-----~~~~~~~~~l~~~g~i~~~i-~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 344 (344)
T 2h6e_A 293 NYGS-----LNDLEDVVRLSESGKIKPYI-IKVPLDDINKAFTNLDEGRVDGRQVITP 344 (344)
T ss_dssp CSCC-----HHHHHHHHHHHHTTSSCCCE-EEECC----------------CEEEECC
T ss_pred ecCC-----HHHHHHHHHHHHcCCCCcce-EEEeHHHHHHHHHHHHcCCCceEEEEeC
Confidence 6543 57789999999999999988 8899999999999999888889999863
|
| >1jvb_A NAD(H)-dependent alcohol dehydrogenase; archaeon, zinc, oxidoreductase; HET: MSE; 1.85A {Sulfolobus solfataricus} SCOP: b.35.1.2 c.2.1.1 PDB: 1r37_A* 1nto_A 1nvg_A 3i4c_A 2eer_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.1e-49 Score=355.25 Aligned_cols=304 Identities=20% Similarity=0.253 Sum_probs=262.0
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC--------CccccCCCCCccc
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--------SYVESFKPGMPIS 78 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--------~~~~p~~~G~e~~ 78 (342)
|||+++.++ |.+ +++++ +|.| +++++||+|||.++|||++|++.+.|.++ ...+|.++|||++
T Consensus 1 Mka~~~~~~--g~~----l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~~~~p~i~G~e~~ 71 (347)
T 1jvb_A 1 MRAVRLVEI--GKP----LSLQE--IGVP-KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71 (347)
T ss_dssp CEEEEECST--TSC----CEEEE--CCCC-CCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEE
T ss_pred CeEEEEecC--CCC----eEEEE--eeCC-CCCCCeEEEEEEEEEecHHHHHHhcCCCcccccccccCCCCCccccccce
Confidence 589999988 655 56765 5555 45899999999999999999999887553 2357899999977
Q ss_pred ccEEEEEecCCCCCCCCCCEEEec------------------------------cccceeEeecC-CcceeecCCCCCcc
Q 019332 79 GYGVAKVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTA-PQLFKIQHTDVPLS 127 (342)
Q Consensus 79 G~g~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~-~~~~~i~p~~~~~~ 127 (342)
| +|+++|++|++|++||||++. |+|+||+++++ +.++++ ++ ++
T Consensus 72 G--~V~~vG~~v~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~G~~~~G~~aey~~v~~~~~~~~i--~~--~~ 145 (347)
T 1jvb_A 72 G--KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL--RR--LN 145 (347)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC--SS--SC
T ss_pred E--EEEEECCCCCCCCCCCEEEeCCCCCCCCChhhhCcCcccCcccccccccCCCcceeEEEecCccceEEe--CC--CC
Confidence 6 999999999999999999752 78999999999 999998 55 55
Q ss_pred ch-hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEec
Q 019332 128 YY-TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNY 205 (342)
Q Consensus 128 ~~-~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~ 205 (342)
++ +|++++++.|||+++. .++++++++|||+|++|++|++++|+++.. |++|+++++++++.+.++ ++|++.++|+
T Consensus 146 ~~~aa~l~~~~~ta~~~l~-~~~~~~g~~vlV~Gagg~iG~~~~~~a~~~~Ga~Vi~~~~~~~~~~~~~-~~g~~~~~~~ 223 (347)
T 1jvb_A 146 AVEAAPLTCSGITTYRAVR-KASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINA 223 (347)
T ss_dssp HHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEET
T ss_pred HHHcccchhhHHHHHHHHH-hcCCCCCCEEEEECCCccHHHHHHHHHHHcCCCeEEEEcCCHHHHHHHH-HhCCCEEecC
Confidence 54 7789999999999995 489999999999999779999999999999 999999999999999998 8999999999
Q ss_pred CCchhHHHHHHHHCC-CCccEEEeCCChh-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeeccee
Q 019332 206 KEEPDLNEALKRYFP-EGIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLV 283 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~-~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 283 (342)
.+. ++.+.+.+.+. +++|++||++|+. .+..++++++++|+++.+|..... . ..+...++.+++++.++..
T Consensus 224 ~~~-~~~~~~~~~~~~~~~d~vi~~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~-~~~~~~~~~~~~~i~g~~~ 296 (347)
T 1jvb_A 224 SMQ-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGAD-----L-HYHAPLITLSEIQFVGSLV 296 (347)
T ss_dssp TTS-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCCC-----C-CCCHHHHHHHTCEEEECCS
T ss_pred CCc-cHHHHHHHHhcCCCceEEEECCCCHHHHHHHHHHHhcCCEEEEECCCCCC-----C-CCCHHHHHhCceEEEEEec
Confidence 887 88888888886 5899999999985 889999999999999999875411 1 2344566778899888765
Q ss_pred cccccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 284 RDYYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 284 ~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.. .+.++++++++.+|.+++.++.+|+|+++++|++.+.+++..||+|+++
T Consensus 297 ~~-----~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvl~~ 347 (347)
T 1jvb_A 297 GN-----QSDFLGIMRLAEAGKVKPMITKTMKLEEANEAIDNLENFKAIGRQVLIP 347 (347)
T ss_dssp CC-----HHHHHHHHHHHHTTSSCCCCEEEEEGGGHHHHHHHHHTTCCCSEEEEEC
T ss_pred cC-----HHHHHHHHHHHHcCCCCceEEEEEcHHHHHHHHHHHHCCCCcceEEecC
Confidence 44 6778999999999999998888999999999999999998889999974
|
| >3ip1_A Alcohol dehydrogenase, zinc-containing; structural genomics, metal-binding, oxidoreductase, PSI-2, protein structure initiative; 2.09A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=100.00 E-value=5.6e-50 Score=366.92 Aligned_cols=314 Identities=18% Similarity=0.164 Sum_probs=261.3
Q ss_pred ccccEEEEecccCCCCCCCce---------------------EEEEeeccccCCCCCCcEEEEEEeeecCcccccccccC
Q 019332 5 VRNKQVILKDYVSGFPKETDM---------------------YMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI 63 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~---------------------~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~ 63 (342)
|+|||+++.++ |.|.++.. .++..++|.|.+++++||||||.++|||++|++.+.|.
T Consensus 1 ~~m~a~~~~~~--~~p~~~~~~~~~~~~~~~~m~a~~~~~~~~l~~~~~~~P~~~~~~eVlVkv~a~gi~~~D~~~~~g~ 78 (404)
T 3ip1_A 1 MSLRAVRLHAK--WDPRPEFKLGPKDIEGKLTWLGSKVWRYPEVRVEEVPEPRIEKPTEIIIKVKACGICGSDVHMAQTD 78 (404)
T ss_dssp -CEEEEEEEEE--ECCCTTCCCCTTCBTTTBBSCGGGTEEEEEEEEEEECCCCCCSTTEEEEEEEEEECCHHHHHHHCBC
T ss_pred CcceEEEecCC--CCCCCCCCCCchhhhhhhhcceEEEEeCCceEEEEcCCCCCCCcCEEEEEEeEeeeCHHHHHHhcCC
Confidence 35699999998 77752211 34444566664268999999999999999999988764
Q ss_pred C-------CCccccCCCCCcccccEEEEEecCCC------CCCCCCCEEEe-----------------------------
Q 019332 64 K-------GSYVESFKPGMPISGYGVAKVLDSEN------PEFKKGDLVWG----------------------------- 101 (342)
Q Consensus 64 ~-------~~~~~p~~~G~e~~G~g~v~~vG~~v------~~~~vGd~V~~----------------------------- 101 (342)
. ....+|.++|||++| +|+++|++| ++|++||||++
T Consensus 79 ~~~~~~~~~~~~~P~i~G~E~~G--~V~~vG~~v~~~~~~~~~~vGdrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~g~~ 156 (404)
T 3ip1_A 79 EEGYILYPGLTGFPVTLGHEFSG--VVVEAGPEAINRRTNKRFEIGEPVCAEEMLWCGHCRPCAEGFPNHCENLNELGFN 156 (404)
T ss_dssp TTSBBSCCSCBCSSEECCCEEEE--EEEEECTTCEETTTTEECCTTCEEEECSEECCSCSHHHHTTCGGGCTTCEEBTTT
T ss_pred CCccccccccCCCCcccCccceE--EEEEECCCccccccCCCCCCCCEEEECCccCCCCCHHHHCcCcccCccccccCCC
Confidence 2 123568999999776 999999999 89999999997
Q ss_pred -ccccceeEeecCCcceeecCCCCCc-----cchhhccCCchhhHHHhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHH
Q 019332 102 -MTGWEEYSLVTAPQLFKIQHTDVPL-----SYYTGILGMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLVGQFAK 174 (342)
Q Consensus 102 -~g~~~~~~~v~~~~~~~i~p~~~~~-----~~~~a~l~~~~~ta~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~ 174 (342)
.|+|+||++++.+.++++ |++++. ..++|+++.+++|||+++... +++++|++|||+|+ |++|++++|+|+
T Consensus 157 ~~G~~aey~~v~~~~~~~i-P~~~~~~~~~~~~~aa~l~~~~~ta~~al~~~~~~~~~g~~VlV~Ga-G~vG~~aiqlak 234 (404)
T 3ip1_A 157 VDGAFAEYVKVDAKYAWSL-RELEGVYEGDRLFLAGSLVEPTSVAYNAVIVRGGGIRPGDNVVILGG-GPIGLAAVAILK 234 (404)
T ss_dssp BCCSSBSEEEEEGGGEEEC-GGGBTTBCTHHHHHHHHTHHHHHHHHHHHTTTSCCCCTTCEEEEECC-SHHHHHHHHHHH
T ss_pred CCCCCcceEEechHHeEec-cccccccccccchhHHhhhhHHHHHHHHHHHhccCCCCCCEEEEECC-CHHHHHHHHHHH
Confidence 279999999999999999 887532 224788999999999999654 48999999999998 999999999999
Q ss_pred HcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChh--hHHHHHHhh----hhCC
Q 019332 175 LLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGK--MLDAVLLNM----KIHG 246 (342)
Q Consensus 175 ~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~--~~~~~~~~l----~~~G 246 (342)
..|+ +|++++++++|+++++ ++|+++++|+++. ++.+.+++.+++ ++|++|||+|+. .+..++++| +++|
T Consensus 235 ~~Ga~~Vi~~~~~~~~~~~~~-~lGa~~vi~~~~~-~~~~~i~~~t~g~g~D~vid~~g~~~~~~~~~~~~l~~~~~~~G 312 (404)
T 3ip1_A 235 HAGASKVILSEPSEVRRNLAK-ELGADHVIDPTKE-NFVEAVLDYTNGLGAKLFLEATGVPQLVWPQIEEVIWRARGINA 312 (404)
T ss_dssp HTTCSEEEEECSCHHHHHHHH-HHTCSEEECTTTS-CHHHHHHHHTTTCCCSEEEECSSCHHHHHHHHHHHHHHCSCCCC
T ss_pred HcCCCEEEEECCCHHHHHHHH-HcCCCEEEcCCCC-CHHHHHHHHhCCCCCCEEEECCCCcHHHHHHHHHHHHhccCCCc
Confidence 9999 9999999999999999 9999999999988 999999999988 999999999996 677777788 9999
Q ss_pred EEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCcee--eeeeeeccccHHHHHH
Q 019332 247 RIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY--VEDMAEGLESAPATLI 324 (342)
Q Consensus 247 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~--~~~~~~~l~~~~~a~~ 324 (342)
+++.+|...+. ...+...++.+++++.++.... ..+.++++++++.+| +++ .+..+|+|+++++|++
T Consensus 313 ~iv~~G~~~~~------~~~~~~~~~~~~~~i~g~~~~~----~~~~~~~~~~ll~~g-l~~~~~i~~~~~l~~~~~A~~ 381 (404)
T 3ip1_A 313 TVAIVARADAK------IPLTGEVFQVRRAQIVGSQGHS----GHGTFPRVISLMASG-MDMTKIISKTVSMEEIPEYIK 381 (404)
T ss_dssp EEEECSCCCSC------EEECHHHHHHTTCEEEECCCCC----STTHHHHHHHHHHTT-CCGGGGCCEEECGGGHHHHHH
T ss_pred EEEEeCCCCCC------CcccHHHHhccceEEEEecCCC----chHHHHHHHHHHHcC-CChhheEEEEeeHHHHHHHHH
Confidence 99999986542 2456677888999998875422 135678999999999 754 5677889999999999
Q ss_pred HHHcCCccceEEEEecC
Q 019332 325 GLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 325 ~~~~~~~~gkvvv~~~~ 341 (342)
.+. .||+||++++
T Consensus 382 ~~~----~GKvvl~~~~ 394 (404)
T 3ip1_A 382 RLQ----TDKSLVKVTM 394 (404)
T ss_dssp HTT----TCTTCSCEEE
T ss_pred HHh----CCcEEEecCC
Confidence 987 5798888753
|
| >1v3u_A Leukotriene B4 12- hydroxydehydrogenase/prostaglandin 15-keto reductase; rossmann fold, riken structural genomics/proteomics initiative, RSGI; 2.00A {Cavia porcellus} SCOP: b.35.1.2 c.2.1.1 PDB: 1v3t_A 1v3v_A* 2dm6_A* 1zsv_A 2y05_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.5e-48 Score=347.62 Aligned_cols=322 Identities=42% Similarity=0.676 Sum_probs=260.8
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
+++||||++.+++.|.|+++.+++++.+. | +++++||+|||.++|||+.|+.. . ....+|.++|||++| +|
T Consensus 5 ~~~mka~~~~~~~~g~~~~~~l~~~e~~~--P-~~~~~eVlVkv~a~gi~~~~~~~-~---~~~~~p~~~g~e~~G--~V 75 (333)
T 1v3u_A 5 MVKAKSWTLKKHFQGKPTQSDFELKTVEL--P-PLKNGEVLLEALFLSVDPYMRIA-S---KRLKEGAVMMGQQVA--RV 75 (333)
T ss_dssp CCEEEEEEECC-----CCGGGEEEEEEEC--C-CCCTTCEEEEEEEEECCTHHHHH-T---TTCCTTSBCCCCEEE--EE
T ss_pred cccccEEEEeecCCCCCCccceEEEeCCC--C-CCCCCEEEEEEEEeccCHHHccc-c---CcCCCCcccccceEE--EE
Confidence 46799999998644556557788876554 4 45899999999999999988722 1 123467889999666 77
Q ss_pred EEecCCCCCCCCCCEEEeccccceeEeecCCcceeecCCC----CCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 84 KVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTD----VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~----~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
++. ++++|++||||++.|+|+||++++.+.++++ |++ +++...+|+++++++|||+++.+.+++++|++|||+
T Consensus 76 v~~--~v~~~~vGdrV~~~g~~aey~~v~~~~~~~i-P~~~~~~~~~~~a~a~l~~~~~ta~~al~~~~~~~~g~~vlV~ 152 (333)
T 1v3u_A 76 VES--KNSAFPAGSIVLAQSGWTTHFISDGKGLEKL-LTEWPDKLPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVS 152 (333)
T ss_dssp EEE--SCTTSCTTCEEEECCCSBSEEEESSTTEEEC-C--CCTTSCGGGGGTTTSHHHHHHHHHHHTTSCCCSSCEEEEE
T ss_pred Eec--CCCCCCCCCEEEecCceEEEEEechHHeEEc-CcccccCCCHHHHHHHhCChHHHHHHHHHHhhCCCCCCEEEEe
Confidence 664 6889999999999999999999999999999 986 444432579999999999999778899999999999
Q ss_pred cCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC-chhHHHHHHHHCCCCccEEEeCCChhhHHHH
Q 019332 160 AASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-EPDLNEALKRYFPEGIDIYFENVGGKMLDAV 238 (342)
Q Consensus 160 ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~ 238 (342)
|++|++|++++|+++..|++|+++++++++.+.++ ++|++.++|+.+ . ++.+.+.+.+.+++|++||++|+..+..+
T Consensus 153 Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~~-~~g~~~~~d~~~~~-~~~~~~~~~~~~~~d~vi~~~g~~~~~~~ 230 (333)
T 1v3u_A 153 AAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTVN-SLEEALKKASPDGYDCYFDNVGGEFLNTV 230 (333)
T ss_dssp STTBHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSCS-CHHHHHHHHCTTCEEEEEESSCHHHHHHH
T ss_pred cCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCcEEEecCCHH-HHHHHHHHHhCCCCeEEEECCChHHHHHH
Confidence 99999999999999999999999999999999887 999988899987 6 88888888876689999999999889999
Q ss_pred HHhhhhCCEEEEEceeccccCCC-CccccchHHHHhcceeeecceecccc-cchHHHHHHHHHHHHcCCceeeeeeeecc
Q 019332 239 LLNMKIHGRIAVCGMISQYNLDR-PEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMIIPHIKEGKIVYVEDMAEGL 316 (342)
Q Consensus 239 ~~~l~~~G~~v~~g~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~g~~~~~~~~~~~l 316 (342)
+++++++|+++.+|...+..... +....+...++.+++++.++....+. ....+.++++++++.+|.+++.+..+++|
T Consensus 231 ~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~~~l 310 (333)
T 1v3u_A 231 LSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWVLEGKIQYHEHVTKGF 310 (333)
T ss_dssp HTTEEEEEEEEECCCCC-------CCBCCCHHHHHHTTCEEEECCGGGCCTHHHHHHHHHHHHHHHTTSSCCCEEEEECG
T ss_pred HHHHhcCCEEEEEeccccccCCCCCCCCcCHHHHhhcCceEEEEehhhcchHHHHHHHHHHHHHHHCCCccCccccccCH
Confidence 99999999999999765421000 00112445677889999887654432 34467889999999999999988888899
Q ss_pred ccHHHHHHHHHcCCccceEEEEe
Q 019332 317 ESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 317 ~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++++|++.+.+++..||+|+++
T Consensus 311 ~~~~~A~~~~~~~~~~gKvvl~~ 333 (333)
T 1v3u_A 311 ENMPAAFIEMLNGANLGKAVVTA 333 (333)
T ss_dssp GGHHHHHHHHHTTCCSBEEEEEC
T ss_pred HHHHHHHHHHHcCCCCceEEEeC
Confidence 99999999999988889999974
|
| >2vn8_A Reticulon-4-interacting protein 1; mitochondrion, transit peptide, receptor inhibitor; HET: NDP CIT; 2.1A {Homo sapiens} | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-49 Score=359.98 Aligned_cols=321 Identities=21% Similarity=0.284 Sum_probs=253.6
Q ss_pred cccccEEEEecccCCCCCCCceEE-EEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---------------Cc
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYM-TESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---------------SY 67 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~-~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---------------~~ 67 (342)
+++|||+++.++ |.| ..+++ ++ +|.|.+++++||+|||.++|||++|++.+.|..+ ..
T Consensus 19 ~~~mka~~~~~~--g~~--~~l~~~~~--~p~P~~~~~~eVlVkv~a~gi~~~D~~~~~G~~~~~~~~~~~~~~~~~~~~ 92 (375)
T 2vn8_A 19 YFQSMAWVIDKY--GKN--EVLRFTQN--MMMPIIHYPNEVIVKVHAASVNPIDVNMRSGYGATALNMKRDPLHVKIKGE 92 (375)
T ss_dssp CCCEEEEEBSSC--CSG--GGCEEEEE--ECCCCCCSTTEEEEEEEEEEECHHHHHHHTTTTHHHHHHHHCTTCCSCTTT
T ss_pred CccceeEEeccC--CCc--cceEEecc--ccCCCCCCCCEEEEEEEEEEcCHHHHHHhccCccccccccccccccccccc
Confidence 467899999998 766 45666 54 5555434899999999999999999998887531 12
Q ss_pred cccCCCCCcccccEEEEEecCCCCCCCCCCEEEec------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHH
Q 019332 68 VESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAY 141 (342)
Q Consensus 68 ~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~ 141 (342)
.+|.++|||++| +|+++|++|++|++||+|++. |+|+||++++++.++++ |+++++. ++|+++++++|||
T Consensus 93 ~~P~v~G~E~~G--~V~~vG~~V~~~~vGDrV~~~~~~~~~G~~aey~~v~~~~~~~i-P~~ls~~-~Aa~l~~~~~tA~ 168 (375)
T 2vn8_A 93 EFPLTLGRDVSG--VVMECGLDVKYFKPGDEVWAAVPPWKQGTLSEFVVVSGNEVSHK-PKSLTHT-QAASLPYVALTAW 168 (375)
T ss_dssp TCSBCCCCEEEE--EEEEECTTCCSCCTTCEEEEECCTTSCCSSBSEEEEEGGGEEEC-CTTSCHH-HHTTSHHHHHHHH
T ss_pred cCCcccceeeeE--EEEEeCCCCCCCCCCCEEEEecCCCCCccceeEEEEcHHHeeeC-CCCCCHH-HHhhhHHHHHHHH
Confidence 268999999776 999999999999999999984 89999999999999999 9994444 3778888899999
Q ss_pred HhhhhhcC----CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHH
Q 019332 142 AGFYEVCS----PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKR 217 (342)
Q Consensus 142 ~al~~~~~----~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~ 217 (342)
+++.+.++ +++|++|||+||+|++|++++|+|+..|++|++++ ++++.++++ ++|++.++|+++. ++.+.+++
T Consensus 169 ~al~~~~~~~~~~~~g~~VlV~Ga~G~vG~~~~qla~~~Ga~Vi~~~-~~~~~~~~~-~lGa~~v~~~~~~-~~~~~~~~ 245 (375)
T 2vn8_A 169 SAINKVGGLNDKNCTGKRVLILGASGGVGTFAIQVMKAWDAHVTAVC-SQDASELVR-KLGADDVIDYKSG-SVEEQLKS 245 (375)
T ss_dssp HHHTTTTCCCTTTCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEE-CGGGHHHHH-HTTCSEEEETTSS-CHHHHHHT
T ss_pred HHHHHhcccccccCCCCEEEEECCCCHHHHHHHHHHHhCCCEEEEEe-ChHHHHHHH-HcCCCEEEECCch-HHHHHHhh
Confidence 99977788 99999999999999999999999999999999998 678889998 9999999999887 88777765
Q ss_pred HCCCCccEEEeCCChh--hHHHHHHhhhhCCEEEEEceeccccCCCCccccc----hHHHHhcce-ee-ecceec-cccc
Q 019332 218 YFPEGIDIYFENVGGK--MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHN----LMYLVTKRV-RM-EGFLVR-DYYH 288 (342)
Q Consensus 218 ~~~~~~d~vid~~g~~--~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~----~~~~~~~~~-~~-~~~~~~-~~~~ 288 (342)
. +++|++|||+|+. .+..++++++++|+++.+|............... ...++.+++ ++ .+..+. .+..
T Consensus 246 ~--~g~D~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 323 (375)
T 2vn8_A 246 L--KPFDFILDNVGGSTETWAPDFLKKWSGATYVTLVTPFLLNMDRLGIADGMLQTGVTVGSKALKHFWKGVHYRWAFFM 323 (375)
T ss_dssp S--CCBSEEEESSCTTHHHHGGGGBCSSSCCEEEESCCSHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred c--CCCCEEEECCCChhhhhHHHHHhhcCCcEEEEeCCCcccccccccccchhheeehhhccccccccccCcceEEEEeC
Confidence 3 3799999999986 3478889999999999998643310000000000 012223322 11 222211 1111
Q ss_pred chHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 289 LYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
...+.++++++++.+|.+++.+..+|||+++++|++.+.+++..||+|+++
T Consensus 324 ~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 374 (375)
T 2vn8_A 324 ASGPCLDDIAELVDAGKIRPVIEQTFPFSKVPEAFLKVERGHARGKTVINV 374 (375)
T ss_dssp CCHHHHHHHHHHHHTTSCCCCEEEEEEGGGHHHHHHHHHHCCCSSEEEEEC
T ss_pred CCHHHHHHHHHHHHCCCcccCcCeEECHHHHHHHHHHHHcCCCCCeEEEEe
Confidence 235678999999999999998888999999999999999988889999976
|
| >1xa0_A Putative NADPH dependent oxidoreductases; structural genomics, protein structure initiative, MCSG; HET: DTY; 2.80A {Geobacillus stearothermophilus} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.9e-49 Score=354.23 Aligned_cols=313 Identities=20% Similarity=0.264 Sum_probs=248.5
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v 83 (342)
.+|||+++.++ |+| ..+++++ +|.| .++++||+|||.++|||++|++.+.|.++. ..+|.++|||++| +|
T Consensus 2 ~~mka~~~~~~--g~~--~~l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~v~G~E~~G--~V 72 (328)
T 1xa0_A 2 SAFQAFVVNKT--ETE--FTAGVQT--ISMD-DLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAG--VV 72 (328)
T ss_dssp CEEEEEEEEEE--TTE--EEEEEEE--EEGG-GSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEE--EE
T ss_pred CcceEEEEecC--CCc--ceeEEEe--ccCC-CCCCCeEEEEEEEEecCHHHHHhhcCCCCCCCCCCcccCcceEE--EE
Confidence 46899999998 654 2355655 5555 458999999999999999999988875432 3568999999777 88
Q ss_pred EEecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhh--hcCCCC
Q 019332 84 KVLDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYE--VCSPKQ 152 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~--~~~~~~ 152 (342)
+++ ++++|++||||++. |+|+||++++++.++++ |+++++. ++|++++++.|||+++.. .+++++
T Consensus 73 ~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~l~~~-~aa~~~~~~~ta~~~l~~~~~~~~~~ 148 (328)
T 1xa0_A 73 VSS--QHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPL-PKGLTLK-EAMAIGTAGFTAALSIHRLEEHGLTP 148 (328)
T ss_dssp EEC--CSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTCCG
T ss_pred Eec--CCCCCCCCCEEEEccccCCCCCCccceeEEEechHHeEEC-CCCCCHH-HhhhhhhhHHHHHHHHHHHhhcCCCC
Confidence 885 57899999999963 79999999999999999 9994444 378888889999988753 367899
Q ss_pred CC-EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~-~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++ +|||+|++|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++. + .+.+++.+++++|++|||+|
T Consensus 149 g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~-~-~~~~~~~~~~~~d~vid~~g 225 (328)
T 1xa0_A 149 ERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAREDV-M-AERIRPLDKQRWAAAVDPVG 225 (328)
T ss_dssp GGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEECC-----------CCSCCEEEEEECST
T ss_pred CCceEEEecCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCcEEEecCCc-H-HHHHHHhcCCcccEEEECCc
Confidence 97 9999999999999999999999999999999999999998 8999999998764 4 44455555458999999999
Q ss_pred hhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeee
Q 019332 232 GKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVE 310 (342)
Q Consensus 232 ~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~ 310 (342)
++.+..++++++++|+++.+|...+.. .......++.+++++.++..... .....+.++.+.+++.++ +++.
T Consensus 226 ~~~~~~~~~~l~~~G~~v~~G~~~~~~-----~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g-l~~~- 298 (328)
T 1xa0_A 226 GRTLATVLSRMRYGGAVAVSGLTGGAE-----VPTTVHPFILRGVSLLGIDSVYCPMDLRLRIWERLAGDLKPD-LERI- 298 (328)
T ss_dssp TTTHHHHHHTEEEEEEEEECSCCSSSC-----CCCCSHHHHHTTCEEEECCSSSCCHHHHHHHHHHHHTTTCCC-HHHH-
T ss_pred HHHHHHHHHhhccCCEEEEEeecCCCC-----CCCchhhhhhcCceEEEEecccCCHHHHHHHHHHHHHHHHcC-Ccee-
Confidence 989999999999999999999765421 12234456788999988743221 222345677777878888 7764
Q ss_pred eeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 311 DMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 311 ~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
..+|+|+++++|++.+.+++..||+||+++
T Consensus 299 ~~~~~l~~~~~A~~~~~~~~~~gKvvv~~~ 328 (328)
T 1xa0_A 299 AQEISLAELPQALKRILRGELRGRTVVRLA 328 (328)
T ss_dssp EEEEEGGGHHHHHHHHHHTCCCSEEEEECC
T ss_pred eeEeCHHHHHHHHHHHHcCCCCCeEEEEeC
Confidence 578899999999999999888899999863
|
| >1tt7_A YHFP; alcohol dehydrogenase, Zn-dependent, NAD, structural genomics, protein structure initiative, PSI; 2.70A {Bacillus subtilis} SCOP: b.35.1.2 c.2.1.1 PDB: 1y9e_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-50 Score=362.15 Aligned_cols=316 Identities=20% Similarity=0.259 Sum_probs=254.3
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYG 81 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g 81 (342)
||.+|||+++.++ |++ ..+++++ +|.| .++++||+|||.++|||++|++.+.|..+. ..+|.++|||++|
T Consensus 1 m~~~mka~~~~~~--g~~--~~l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~E~~G-- 71 (330)
T 1tt7_A 1 MSTLFQALQAEKN--ADD--VSVHVKT--ISTE-DLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG-- 71 (330)
T ss_dssp -CCEEEEEEECCG--GGS--CCCEEEE--EESS-SSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEE--
T ss_pred CCCcceEEEEecC--CCC--cceeEee--cCCC-CCCCCEEEEEEEEEecCHHHHhhhcCCCCCcCCCCccccceEEE--
Confidence 4567899999998 654 3466665 4555 458999999999999999999998886432 3468999999777
Q ss_pred EEEEecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhh--hcCC
Q 019332 82 VAKVLDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYE--VCSP 150 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~--~~~~ 150 (342)
+|+++ ++++|++||||++. |+|+||++++++.++++ |+++++. ++|++++++.|||+++.. .+++
T Consensus 72 ~V~~~--~v~~~~vGdrV~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~l~~~-~aa~l~~~~~ta~~~l~~~~~~~~ 147 (330)
T 1tt7_A 72 TVVSS--NDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPL-PQNLSLK-EAMVYGTAGFTAALSVHRLEQNGL 147 (330)
T ss_dssp EEEEC--SSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEEC-CTTCCHH-HHHHHHHHHHHHHHHHHHHHHTTC
T ss_pred EEEEc--CCCCCCCCCEEEEcccccCCCCCccceeEEEecHHHeEEC-CCCCCHH-HHhhccchHHHHHHHHHHHHhcCc
Confidence 89886 46889999999963 79999999999999999 9994444 388888889999988753 3678
Q ss_pred CCCC-EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGE-CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~-~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
++++ +|||+|++|++|++++|+|+..|++|++++++++++++++ ++|+++++|+++. + .+.+++.+++++|++|||
T Consensus 148 ~~g~~~VlV~Ga~G~vG~~~~q~a~~~Ga~vi~~~~~~~~~~~~~-~lGa~~v~~~~~~-~-~~~~~~~~~~~~d~vid~ 224 (330)
T 1tt7_A 148 SPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISREDV-Y-DGTLKALSKQQWQGAVDP 224 (330)
T ss_dssp CGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHHH-C-SSCCCSSCCCCEEEEEES
T ss_pred CCCCceEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCcEEEECCCc-h-HHHHHHhhcCCccEEEEC
Confidence 9997 9999999999999999999999999999999999999998 8999999887532 2 222333444489999999
Q ss_pred CChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCcee
Q 019332 230 VGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVY 308 (342)
Q Consensus 230 ~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~ 308 (342)
+|++.+..++++++++|+++.+|...+. ........++.+++++.++..... .....+.++.+++++.+|.+++
T Consensus 225 ~g~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~g~l~~ 299 (330)
T 1tt7_A 225 VGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVYCPMDVRAAVWERMSSDLKPDQLLT 299 (330)
T ss_dssp CCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSSCCHHHHHHHHHHTTTTSCCSCSTT
T ss_pred CcHHHHHHHHHhhcCCCEEEEEecCCCC-----ccCcchHHHHhcCeEEEEEeccccCHHHHHHHHHHHHHHHhcCCccc
Confidence 9998899999999999999999975432 112334556788999988743221 2223456777888888899998
Q ss_pred eeeeeeccccHHHHHHHHHcCCccceEEEEe
Q 019332 309 VEDMAEGLESAPATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 309 ~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~ 339 (342)
.+..+|+|+++++|++.+.+++..||+|+++
T Consensus 300 ~i~~~~~l~~~~~A~~~~~~~~~~gKvvi~~ 330 (330)
T 1tt7_A 300 IVDREVSLEETPGALKDILQNRIQGRVIVKL 330 (330)
T ss_dssp SEEEEECSTTHHHHHHHTTTTCCSSEEEECC
T ss_pred ccceEEcHHHHHHHHHHHHcCCCCCeEEEeC
Confidence 8888999999999999999988889999864
|
| >1yqd_A Sinapyl alcohol dehydrogenase; lignin, monolignol, oxidoreductase, zinc-dependent, plant DE biosynthesis, substrate inhibition; HET: NAP; 1.65A {Populus tremuloides} PDB: 1yqx_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=2.3e-48 Score=351.64 Aligned_cols=305 Identities=17% Similarity=0.158 Sum_probs=254.2
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~ 85 (342)
+||++.+..+ +.+ +.+++.+ +|.| .++++||+|||.++|||++|++.+.|.++...+|.++|||++| +|++
T Consensus 14 ~mk~~~~~~~--~~~--~~l~~~~--~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~P~v~GhE~~G--~V~~ 84 (366)
T 1yqd_A 14 PVKAFGWAAR--DQS--GHLSPFN--FSRR-ATGEEDVRFKVLYCGVCHSDLHSIKNDWGFSMYPLVPGHEIVG--EVTE 84 (366)
T ss_dssp SEEEEEEEEC--STT--CCEEEEE--EEEC-CCCTTEEEEEEEEEEECHHHHHHHHTSSSCCCSSBCCCCCEEE--EEEE
T ss_pred CeeEEEEEEc--CCC--CCcEEEE--ccCC-CCCCCeEEEEEEEEeechhhHHHHcCCCCCCCCCEecccceEE--EEEE
Confidence 4555555555 544 3466665 4555 4589999999999999999999988865445678999999776 9999
Q ss_pred ecCCCCCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecCCCCCcc
Q 019332 86 LDSENPEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLS 127 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~ 127 (342)
+|++|++|++||||++ .|+|+||++++++.++++ |+++++.
T Consensus 85 vG~~V~~~~vGDrV~~~~~~~~Cg~C~~c~~g~~~~C~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~~-P~~ls~~ 163 (366)
T 1yqd_A 85 VGSKVKKVNVGDKVGVGCLVGACHSCESCANDLENYCPKMILTYASIYHDGTITYGGYSNHMVANERYIIRF-PDNMPLD 163 (366)
T ss_dssp ECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEESSSSBCTTSCBCCCSSBSEEEEEGGGCEEC-CTTSCTT
T ss_pred ECCCCCcCCCCCEEEEcCCcCCCCCChhhhCcCcccCCcccccccccccCCCcCCCccccEEEEchhhEEEC-CCCCCHH
Confidence 9999999999999973 278999999999999999 9995444
Q ss_pred chhhccCCchhhHHHhhhhhcCCC-CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecC
Q 019332 128 YYTGILGMPGMTAYAGFYEVCSPK-QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYK 206 (342)
Q Consensus 128 ~~~a~l~~~~~ta~~al~~~~~~~-~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~ 206 (342)
++|++++++.|||+++.+ .+++ +|++|||+|+ |++|++++|+|+..|++|+++++++++++.+++++|++.++|++
T Consensus 164 -~aa~l~~~~~ta~~al~~-~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~~~lGa~~v~~~~ 240 (366)
T 1yqd_A 164 -GGAPLLCAGITVYSPLKY-FGLDEPGKHIGIVGL-GGLGHVAVKFAKAFGSKVTVISTSPSKKEEALKNFGADSFLVSR 240 (366)
T ss_dssp -TTGGGGTHHHHHHHHHHH-TTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGHHHHHHTSCCSEEEETT
T ss_pred -HhhhhhhhHHHHHHHHHh-cCcCCCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhcCCceEEecc
Confidence 378899999999999965 5788 9999999996 99999999999999999999999999988876589999999987
Q ss_pred CchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 207 EEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 207 ~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
+. + .+++.++ ++|++||++|+ ..+..++++++++|+++.+|..... ...+...++.+++++.++....
T Consensus 241 ~~-~---~~~~~~~-~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~------~~~~~~~~~~~~~~i~g~~~~~ 309 (366)
T 1yqd_A 241 DQ-E---QMQAAAG-TLDGIIDTVSAVHPLLPLFGLLKSHGKLILVGAPEKP------LELPAFSLIAGRKIVAGSGIGG 309 (366)
T ss_dssp CH-H---HHHHTTT-CEEEEEECCSSCCCSHHHHHHEEEEEEEEECCCCSSC------EEECHHHHHTTTCEEEECCSCC
T ss_pred CH-H---HHHHhhC-CCCEEEECCCcHHHHHHHHHHHhcCCEEEEEccCCCC------CCcCHHHHHhCCcEEEEecCCC
Confidence 64 3 4555553 79999999998 4789999999999999999875431 1345566788899998876544
Q ss_pred cccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 286 YYHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.+.+.++++++.+|.+++.+ .+|||+++++|++.+.+++..||+|++++
T Consensus 310 -----~~~~~~~~~l~~~g~l~~~~-~~~~l~~~~~A~~~~~~~~~~gKvvl~~~ 358 (366)
T 1yqd_A 310 -----MKETQEMIDFAAKHNITADI-EVISTDYLNTAMERLAKNDVRYRFVIDVG 358 (366)
T ss_dssp -----HHHHHHHHHHHHHTTCCCCE-EEECGGGHHHHHHHHHTTCCSSEEEECHH
T ss_pred -----HHHHHHHHHHHHcCCCCCce-EEEcHHHHHHHHHHHHcCCcceEEEEEcc
Confidence 56788999999999999876 57899999999999999988899999874
|
| >2dph_A Formaldehyde dismutase; dismutation of aldehydes, oxidoreductase; HET: NAD; 2.27A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=357.06 Aligned_cols=309 Identities=19% Similarity=0.201 Sum_probs=256.8
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCC-----CcEEEEEEeeecCcccccccccCCCCccccCCCCCccccc
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGS-----NGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGY 80 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~-----~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~ 80 (342)
+|||+++.++ + .+++++ +|.|.++++ +||+|||.++|||++|++.+.|..+ ..+|.++|||++|
T Consensus 2 ~MkA~~~~~~--~-----~l~~~~--~p~P~~~~~~~~~~~eVlVkv~a~gic~~D~~~~~G~~~-~~~p~v~GhE~~G- 70 (398)
T 2dph_A 2 GNKSVVYHGT--R-----DLRVET--VPYPKLEHNNRKLEHAVILKVVSTNICGSDQHIYRGRFI-VPKGHVLGHEITG- 70 (398)
T ss_dssp CEEEEEEEET--T-----EEEEEE--ECCCCSEETTEECTTCEEEEEEEEECCHHHHHHHTTSSC-CCTTCBCCCCEEE-
T ss_pred ccEEEEEEcC--C-----CEEEEE--ccCCCCCCCcCCCCCeEEEEEEEEeecHHHHHHhcCCCC-CCCCcccCCceEE-
Confidence 5799999876 3 356655 555533256 9999999999999999999988532 3568999999776
Q ss_pred EEEEEecCCCCCCCCCCEEEe-----------------------------------------ccccceeEeecCC--cce
Q 019332 81 GVAKVLDSENPEFKKGDLVWG-----------------------------------------MTGWEEYSLVTAP--QLF 117 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~-----------------------------------------~g~~~~~~~v~~~--~~~ 117 (342)
+|+++|++|++|++||||++ .|+|+||++++++ .++
T Consensus 71 -~V~~vG~~v~~~~vGDrV~~~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~~~~~~G~~~~~~~G~~aey~~v~~~~~~~~ 149 (398)
T 2dph_A 71 -EVVEKGSDVELMDIGDLVSVPFNVACGRCRNCKEARSDVCENNLVNPDADLGAFGFDLKGWSGGQAEYVLVPYADYMLL 149 (398)
T ss_dssp -EEEEECTTCCSCCTTCEEECCSBCCCSCSHHHHTTCGGGCCCTTTCSSSSCCBTTTTBSSCCCSSBSEEEESSHHHHCE
T ss_pred -EEEEECCCCCCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCccccccccccccccccCCCCceeeeeEEeccccCeEE
Confidence 99999999999999999985 2789999999987 799
Q ss_pred eecCCCCCccch-----hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHH
Q 019332 118 KIQHTDVPLSYY-----TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKID 191 (342)
Q Consensus 118 ~i~p~~~~~~~~-----~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~ 191 (342)
++ |++ ++++ +|+++.+++|||+++ +.+++++|++|||+|+ |++|++++|+|+..|+ +|+++++++++++
T Consensus 150 ~i-P~~--~~~~~~~~~aa~l~~~~~ta~~al-~~~~~~~g~~VlV~Ga-G~vG~~aiqlak~~Ga~~Vi~~~~~~~~~~ 224 (398)
T 2dph_A 150 KF-GDK--EQAMEKIKDLTLISDILPTGFHGC-VSAGVKPGSHVYIAGA-GPVGRCAAAGARLLGAACVIVGDQNPERLK 224 (398)
T ss_dssp EC-SSH--HHHHHTHHHHTTTTTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHH
T ss_pred EC-CCC--CChhhhcchhhhhcCHHHHHHHHH-HHcCCCCCCEEEEECC-CHHHHHHHHHHHHcCCCEEEEEcCCHHHHH
Confidence 99 998 5543 578899999999999 6789999999999996 9999999999999999 9999999999999
Q ss_pred HHHHHcCCCeeEecCCchhH-HHHHHHHCCC-CccEEEeCCChh---------------hHHHHHHhhhhCCEEEEEcee
Q 019332 192 LLKNKFGFDEAFNYKEEPDL-NEALKRYFPE-GIDIYFENVGGK---------------MLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 192 ~~~~~~g~~~v~~~~~~~~~-~~~i~~~~~~-~~d~vid~~g~~---------------~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+++ ++|++ ++|+++. ++ .+.+++.+++ ++|++|||+|+. .+..++++|+++|+++.+|..
T Consensus 225 ~a~-~lGa~-~i~~~~~-~~~~~~~~~~~~g~g~Dvvid~~g~~~~~~~~~~~~~~~~~~~~~~~~~l~~gG~iv~~G~~ 301 (398)
T 2dph_A 225 LLS-DAGFE-TIDLRNS-APLRDQIDQILGKPEVDCGVDAVGFEAHGLGDEANTETPNGALNSLFDVVRAGGAIGIPGIY 301 (398)
T ss_dssp HHH-TTTCE-EEETTSS-SCHHHHHHHHHSSSCEEEEEECSCTTCBCSGGGTTSBCTTHHHHHHHHHEEEEEEEECCSCC
T ss_pred HHH-HcCCc-EEcCCCc-chHHHHHHHHhCCCCCCEEEECCCCccccccccccccccHHHHHHHHHHHhcCCEEEEeccc
Confidence 999 99995 8999876 75 8889998887 899999999974 588999999999999999875
Q ss_pred c-cccCC------CCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCce--e--eeeeeeccccHHHHH
Q 019332 255 S-QYNLD------RPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV--Y--VEDMAEGLESAPATL 323 (342)
Q Consensus 255 ~-~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~--~--~~~~~~~l~~~~~a~ 323 (342)
. +.+.. ..........++.+++++.+..... .+.++++++++.+|.++ + .+..+|+|+++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~k~~~i~g~~~~~-----~~~~~~~~~l~~~g~l~~~~~~~i~~~~~l~~~~~A~ 376 (398)
T 2dph_A 302 VGSDPDPVNKDAGSGRLHLDFGKMWTKSIRIMTGMAPV-----TNYNRHLTEAILWDQMPYLSKVMNIEVITLDQAPDGY 376 (398)
T ss_dssp CSCCSSCSSHHHHTTEEEEEHHHHHHTTCEEECSSCCG-----GGTHHHHHHHHHTTCCHHHHHHHCEEEECSTTHHHHH
T ss_pred cccccccccccccCCcccccHHHHhhcCCEEEEeccCc-----HHHHHHHHHHHHcCCCCccchhhEEEEEcHHHHHHHH
Confidence 2 11000 0112234556778899988764432 45688899999999998 6 567789999999999
Q ss_pred HHHHcCCccceEEEEec
Q 019332 324 IGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 324 ~~~~~~~~~gkvvv~~~ 340 (342)
+.+.+++. ||+||+++
T Consensus 377 ~~~~~~~~-gKvvv~~~ 392 (398)
T 2dph_A 377 AKFDKGSP-AKFVIDPH 392 (398)
T ss_dssp HHHHTTCS-CEEEECTT
T ss_pred HHHhcCCc-eEEEEecC
Confidence 99998887 99999875
|
| >2b5w_A Glucose dehydrogenase; nucleotide binding motif, oxidoreductase; HET: FLC NAP; 1.60A {Haloferax mediterranei} PDB: 2b5v_A* 2vwg_A* 2vwh_A* 2vwp_A* 2vwq_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=3.9e-49 Score=355.87 Aligned_cols=298 Identities=15% Similarity=0.122 Sum_probs=253.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccc---cCCCCCcccccEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVE---SFKPGMPISGYGVA 83 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~---p~~~G~e~~G~g~v 83 (342)
|||+++.++ +.+ +++++ +|.| .++++||||||.++|||++|++.+.|.++...+ |.++||| ++| |
T Consensus 1 MkA~~~~~~--~~~----l~~~~--~p~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~p~v~G~E--~~G-V 68 (357)
T 2b5w_A 1 MKAIAVKRG--EDR----PVVIE--KPRP-EPESGEALVRTLRVGVCGTDHEVIAGGHGGFPEGEDHLVLGHE--AVG-V 68 (357)
T ss_dssp CEEEEEETT--CSS----CEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHSCSTTSCTTCSEEECCSE--EEE-E
T ss_pred CeEEEEeCC--CCc----eEEEE--CCCC-CCCcCEEEEEEeEEeechhcHHHHcCCCCCCCCCCCCcccCce--eEE-E
Confidence 589999988 653 56765 5555 458999999999999999999999886543445 8999999 667 9
Q ss_pred EEecCCCCCCCCCCEEEec-----------------------------------cccceeEeecCCcceeecCCCCCccc
Q 019332 84 KVLDSENPEFKKGDLVWGM-----------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSY 128 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~-----------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~ 128 (342)
+++|++ ++|++||||++. |+|+||++++++.++++ |+++ +
T Consensus 69 ~~vG~~-~~~~vGdrV~~~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~~--~- 143 (357)
T 2b5w_A 69 VVDPND-TELEEGDIVVPTVRRPPASGTNEYFERDQPDMAPDGMYFERGIVGAHGYMSEFFTSPEKYLVRI-PRSQ--A- 143 (357)
T ss_dssp EEECTT-SSCCTTCEEEECSEECCTTCCCHHHHTTCGGGCCTTSCEEETTBEECCSCBSEEEEEGGGEEEC-CGGG--S-
T ss_pred EEECCC-CCCCCCCEEEECCcCCCCCCCChHHhCcCcccCCCCcccccCccCCCcceeeEEEEchHHeEEC-CCCc--c-
Confidence 999999 999999999853 78999999999999999 9994 4
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCC------CEEEEecCCcHHHHHH-HHHH-HHcCCE-EEEEeCChh---hHHHHHHH
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQG------ECVFISAASGAVGQLV-GQFA-KLLGCY-VVGSAGSKD---KIDLLKNK 196 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~------~~vlI~ga~g~vG~~a-i~la-~~~ga~-Vi~~~~s~~---~~~~~~~~ 196 (342)
++|+++.+++|||+++ +.+++++| ++|||+|+ |++|+++ +|+| +..|++ |++++++++ |+++++ +
T Consensus 144 ~~aal~~~~~ta~~al-~~~~~~~g~~~~~~~~VlV~Ga-G~vG~~a~iqla~k~~Ga~~Vi~~~~~~~~~~~~~~~~-~ 220 (357)
T 2b5w_A 144 ELGFLIEPISITEKAL-EHAYASRSAFDWDPSSAFVLGN-GSLGLLTLAMLKVDDKGYENLYCLGRRDRPDPTIDIIE-E 220 (357)
T ss_dssp TTGGGHHHHHHHHHHH-HHHHHTTTTSCCCCCEEEEECC-SHHHHHHHHHHHHCTTCCCEEEEEECCCSSCHHHHHHH-H
T ss_pred hhhhhhchHHHHHHHH-HhcCCCCCcccCCCCEEEEECC-CHHHHHHHHHHHHHHcCCcEEEEEeCCcccHHHHHHHH-H
Confidence 5677888999999999 66889999 99999998 9999999 9999 999996 999999998 999998 9
Q ss_pred cCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHH----
Q 019332 197 FGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYL---- 271 (342)
Q Consensus 197 ~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~---- 271 (342)
+|++++ |+++. ++.+ +++. ++++|++|||+|+ ..+..++++++++|+++.+|..... ....+...+
T Consensus 221 lGa~~v-~~~~~-~~~~-i~~~-~gg~Dvvid~~g~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~~~~~~~ 291 (357)
T 2b5w_A 221 LDATYV-DSRQT-PVED-VPDV-YEQMDFIYEATGFPKHAIQSVQALAPNGVGALLGVPSDW-----AFEVDAGAFHREM 291 (357)
T ss_dssp TTCEEE-ETTTS-CGGG-HHHH-SCCEEEEEECSCCHHHHHHHHHHEEEEEEEEECCCCCCC-----CCCCCHHHHHHHH
T ss_pred cCCccc-CCCcc-CHHH-HHHh-CCCCCEEEECCCChHHHHHHHHHHhcCCEEEEEeCCCCC-----CceecHHHHhHHH
Confidence 999998 99876 7777 8777 5589999999998 4889999999999999999976521 112334445
Q ss_pred HhcceeeecceecccccchHHHHHHHHHHHHcC--C-ceeeeeeeeccccHHHHHHHHHcCCccceEEEEecC
Q 019332 272 VTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEG--K-IVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 272 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g--~-~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
+.+++++.++.... .+.++++++++.+| . +++.+..+|+|+++++|++.+ +..||+|+++++
T Consensus 292 ~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~~~~~~~~i~~~~~l~~~~~A~~~~---~~~gKvvi~~~~ 356 (357)
T 2b5w_A 292 VLHNKALVGSVNSH-----VEHFEAATVTFTKLPKWFLEDLVTGVHPLSEFEAAFDDD---DTTIKTAIEFST 356 (357)
T ss_dssp HHTTCEEEECCCCC-----HHHHHHHHHHHHHSCHHHHHHHEEEEEEGGGGGGGGCCS---TTCCEEEEECCC
T ss_pred HhCCeEEEEeccCC-----HHHHHHHHHHHHhCchhhhhhhcceeecHHHHHHHHHHh---CCCceEEEEecC
Confidence 78899998876544 67889999999999 8 688888899999999999988 357899999865
|
| >1kol_A Formaldehyde dehydrogenase; oxidoreductase; HET: NAD; 1.65A {Pseudomonas putida} SCOP: b.35.1.2 c.2.1.1 | Back alignment and structure |
|---|
Probab=100.00 E-value=1.2e-47 Score=351.10 Aligned_cols=310 Identities=20% Similarity=0.199 Sum_probs=253.8
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCC-CCc------EEEEEEeeecCcccccccccCCCCccccCCCCCccc
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKG-SNG------VLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPIS 78 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~-~~~------VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~ 78 (342)
+|||+++.++ + .+++++ +|.| .++ ++| |||||.++|||++|++.+.|.++ ..+|.++|||++
T Consensus 2 ~Mka~~~~~~--~-----~l~~~~--~p~P-~~~~~~e~~~~~eVlVkv~a~gi~~~D~~~~~g~~~-~~~p~v~GhE~~ 70 (398)
T 1kol_A 2 GNRGVVYLGS--G-----KVEVQK--IDYP-KMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEIT 70 (398)
T ss_dssp CEEEEEEEET--T-----EEEEEE--ECCC-CSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEE
T ss_pred ccEEEEEecC--C-----ceEEEE--ecCC-CCCCCCcccccceEEEEEEEEeechhhHHHHcCCCC-CCCCcccCcccE
Confidence 5899999876 3 356665 5555 334 777 99999999999999999888542 346899999977
Q ss_pred ccEEEEEecCCCCCCCCCCEEEe----------------------------------------ccccceeEeecCC--cc
Q 019332 79 GYGVAKVLDSENPEFKKGDLVWG----------------------------------------MTGWEEYSLVTAP--QL 116 (342)
Q Consensus 79 G~g~v~~vG~~v~~~~vGd~V~~----------------------------------------~g~~~~~~~v~~~--~~ 116 (342)
| +|+++|++|++|++||||++ .|+|+||++++++ .+
T Consensus 71 G--~V~~vG~~v~~~~vGDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~g~~~~~~~~G~~aey~~v~~~~~~~ 148 (398)
T 1kol_A 71 G--EVIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNL 148 (398)
T ss_dssp E--EEEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHC
T ss_pred E--EEEEECCCCCcCCCCCEEEECCcCCCCCChHHhCcCcccCCCcccccccceeeeccCCCCCceeeeEEEecchhCeE
Confidence 6 99999999999999999983 1789999999987 79
Q ss_pred eeecCCCCCccch-----hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhH
Q 019332 117 FKIQHTDVPLSYY-----TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKI 190 (342)
Q Consensus 117 ~~i~p~~~~~~~~-----~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~ 190 (342)
+++ |++ ++++ +|+++.+++|||+++. .+++++|++|||+|+ |++|++++|+|+.+|+ +|++++++++|+
T Consensus 149 ~~~-P~~--~~~~~~~~~aa~l~~~~~ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~aiqlAk~~Ga~~Vi~~~~~~~~~ 223 (398)
T 1kol_A 149 LKL-PDR--DKAMEKIRDLTCLSDILPTGYHGAV-TAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 223 (398)
T ss_dssp EEC-SCH--HHHHHTHHHHGGGGTHHHHHHHHHH-HTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHH
T ss_pred EEC-CCC--cchhhhcccccccccHHHHHHHHHH-HcCCCCCCEEEEECC-cHHHHHHHHHHHHCCCCeEEEEcCCHHHH
Confidence 999 998 5442 5788999999999995 689999999999995 9999999999999999 899999999999
Q ss_pred HHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChh----------------hHHHHHHhhhhCCEEEEEce
Q 019332 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGK----------------MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 191 ~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~----------------~~~~~~~~l~~~G~~v~~g~ 253 (342)
++++ ++|++ ++++++..++.+.+++.+++ ++|++|||+|+. .+..++++++++|+++.+|.
T Consensus 224 ~~a~-~lGa~-~i~~~~~~~~~~~v~~~t~g~g~Dvvid~~G~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~G~iv~~G~ 301 (398)
T 1kol_A 224 AHAK-AQGFE-IADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGL 301 (398)
T ss_dssp HHHH-HTTCE-EEETTSSSCHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSC
T ss_pred HHHH-HcCCc-EEccCCcchHHHHHHHHhCCCCCCEEEECCCCcccccccccccccchHHHHHHHHHHHhcCCEEEEecc
Confidence 9998 99996 78887651388899998877 899999999985 68899999999999999987
Q ss_pred e-ccccCCC------CccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCce---eeeeeeeccccHHHHH
Q 019332 254 I-SQYNLDR------PEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIV---YVEDMAEGLESAPATL 323 (342)
Q Consensus 254 ~-~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~---~~~~~~~~l~~~~~a~ 323 (342)
. .+.+... .........++.+++++.+.... ..+.++++++++.+|.++ +.+..+|+|+++++|+
T Consensus 302 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~-----~~~~~~~~~~l~~~g~l~~~~~~i~~~~~l~~~~~A~ 376 (398)
T 1kol_A 302 YVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTP-----VMKYNRALMQAIMWDRINIAEVVGVQVISLDDAPRGY 376 (398)
T ss_dssp CCSCCTTCSSHHHHTTCCCCCHHHHHHTTCEEEESSCC-----HHHHHHHHHHHHHTTSCCHHHHHTEEEECGGGHHHHH
T ss_pred ccCCcccccccccccccccccHHHHhhcccEEEecccC-----hHHHHHHHHHHHHcCCCCCccceeEEEEcHHHHHHHH
Confidence 5 2211000 01123345567788888765322 256788899999999998 4567889999999999
Q ss_pred HHHHcCCccceEEEEecC
Q 019332 324 IGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 324 ~~~~~~~~~gkvvv~~~~ 341 (342)
+.+.+++. ||+||+++.
T Consensus 377 ~~~~~~~~-gKvvi~~~~ 393 (398)
T 1kol_A 377 GEFDAGVP-KKFVIDPHK 393 (398)
T ss_dssp HHHHHTCS-CEEEECTTC
T ss_pred HHHhCCCc-eEEEEEeCC
Confidence 99998887 999998753
|
| >3iup_A Putative NADPH:quinone oxidoreductase; YP_296108.1, structur genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE NDP; 1.70A {Ralstonia eutropha} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.5e-49 Score=360.85 Aligned_cols=316 Identities=15% Similarity=0.145 Sum_probs=257.2
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---------------
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--------------- 65 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--------------- 65 (342)
|...++|||++.... + ..+++++ +|.| +++++||||||.+++||++|++.+.|.++
T Consensus 2 m~~~~~mka~v~~~~---~---~~l~~~~--~~~P-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~g~~~~p~~ 72 (379)
T 3iup_A 2 MHSALQLRSRIKSSG---E---LELSLDS--IDTP-HPGPDEVLIRIEASPLNPSDLGLLFGAADMSTAKASGTAERPIV 72 (379)
T ss_dssp -CEEEEEEEEECTTS---E---EEEEEEE--EECC-CCCTTEEEEEEEEEECCHHHHHHHHTTCEEEEEEEEECSSSEEE
T ss_pred CCchhhHHHHHhcCC---C---CceEEEe--ccCC-CCCCCEEEEEEEEEecCHHHHHHhcCCccccccccccccccccc
Confidence 455577888866532 1 2356655 4555 45899999999999999999998887421
Q ss_pred --------------CccccCCCCCcccccEEEEEecCCC-CCCCCCCEEEec--cccceeEeecCCcceeecCCCCCccc
Q 019332 66 --------------SYVESFKPGMPISGYGVAKVLDSEN-PEFKKGDLVWGM--TGWEEYSLVTAPQLFKIQHTDVPLSY 128 (342)
Q Consensus 66 --------------~~~~p~~~G~e~~G~g~v~~vG~~v-~~~~vGd~V~~~--g~~~~~~~v~~~~~~~i~p~~~~~~~ 128 (342)
...+|.++|||++| +|+++|++| ++|++||+|++. |+|+||++++.+.++++ |+++++.
T Consensus 73 ~~~~p~~~~~~~~~~~~~p~i~G~e~~G--~V~~vG~~v~~~~~vGdrV~~~~~G~~aey~~v~~~~~~~i-P~~~~~~- 148 (379)
T 3iup_A 73 TARVPEGAMRSMAGRLDASMPVGNEGAG--VVVEAGSSPAAQALMGKTVAAIGGAMYSQYRCIPADQCLVL-PEGATPA- 148 (379)
T ss_dssp EEECCHHHHHHHGGGTTEEEECCSCEEE--EEEEECSSHHHHTTTTCEEEECCSCCSBSEEEEEGGGEEEC-CTTCCHH-
T ss_pred cccCccccccccccccCCCccceeeeEE--EEEEeCCCcccCCCCCCEEEecCCCcceeEEEeCHHHeEEC-CCCCCHH-
Confidence 13468899999776 999999999 899999999998 89999999999999999 9994444
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEec-CCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISA-ASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE 207 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g-a~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~ 207 (342)
++|++++.++|||+++.. .. ++|++|||+| |+|++|++++|+|+..|++|++++++++|+++++ ++|+++++|+++
T Consensus 149 ~aa~l~~~~~ta~~~~~~-~~-~~g~~vlV~gag~G~vG~~a~q~a~~~Ga~Vi~~~~~~~~~~~~~-~lGa~~~~~~~~ 225 (379)
T 3iup_A 149 DGASSFVNPLTALGMVET-MR-LEGHSALVHTAAASNLGQMLNQICLKDGIKLVNIVRKQEQADLLK-AQGAVHVCNAAS 225 (379)
T ss_dssp HHTTSSHHHHHHHHHHHH-HH-HTTCSCEEESSTTSHHHHHHHHHHHHHTCCEEEEESSHHHHHHHH-HTTCSCEEETTS
T ss_pred HHHhhhhhHHHHHHHHHH-hc-cCCCEEEEECCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hCCCcEEEeCCC
Confidence 388889999999988754 44 8999999996 7899999999999999999999999999999999 999999999998
Q ss_pred chhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhh-----C-----------CEEEEEceeccccCCCCccccchH
Q 019332 208 EPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKI-----H-----------GRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 208 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~-----~-----------G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
. ++.+.+++.+++ ++|++|||+|+ ..+..+++++++ + |+++.+|..... .....
T Consensus 226 ~-~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~~l~~~~~r~~G~~~~~G~~~~g~iv~~G~~~~~-------~~~~~ 297 (379)
T 3iup_A 226 P-TFMQDLTEALVSTGATIAFDATGGGKLGGQILTCMEAALNKSAREYSRYGSTTHKQVYLYGGLDTS-------PTEFN 297 (379)
T ss_dssp T-THHHHHHHHHHHHCCCEEEESCEEESHHHHHHHHHHHHHHTTCCSCCTTCCCSCEEEEECCCSEEE-------EEEEC
T ss_pred h-HHHHHHHHHhcCCCceEEEECCCchhhHHHHHHhcchhhhccccceeecccccCceEEEecCCCCC-------ccccc
Confidence 8 999999999987 89999999998 567888888864 3 666666653322 11223
Q ss_pred HHHhcceeeecceeccc-----ccchHHHHHHHHHHHHcCCceeeeeeeeccccH--HHHHHHHHcCCccceEEEEecC
Q 019332 270 YLVTKRVRMEGFLVRDY-----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESA--PATLIGLFSGRNVGKQVVAVAP 341 (342)
Q Consensus 270 ~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~--~~a~~~~~~~~~~gkvvv~~~~ 341 (342)
..+.+++++.++.+..+ ++...+.++.+++++.+ .+++.+..+|+|+++ ++|++.+.+++..||+||+++.
T Consensus 298 ~~~~~~~~i~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~l~~~i~~~~~l~~~~~~~A~~~l~~~~~~gKvVv~~~~ 375 (379)
T 3iup_A 298 RNFGMAWGMGGWLLFPFLQKIGRERANALKQRVVAELKT-TFASHYSKEISLAEVLDLDMIAVYNKRATGEKYLINPNK 375 (379)
T ss_dssp CCSCSCEEEEECCHHHHHHHHCHHHHHHHHHHHHHTTTT-TTCCCCSEEEEHHHHTCHHHHHHHTTCCTTCCEEEETTT
T ss_pred cccccceEEEEEEeeeecccCCHHHHHHHHHHHHHHHhc-cCCCcceEEecHHHhhhHHHHHHHhcCCCCceEEEeCCC
Confidence 44567888888776544 23334556777888877 588888899999999 9999999999999999999864
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=100.00 E-value=1.4e-48 Score=382.57 Aligned_cols=309 Identities=17% Similarity=0.191 Sum_probs=261.2
Q ss_pred EEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEecCC
Q 019332 10 VILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLDSE 89 (342)
Q Consensus 10 ~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG~~ 89 (342)
+.+..+ |.+ +++++.+.+.|.| +++++||+|||.++|||++|++.+.|.+ ..|.++|||++| +|+++|++
T Consensus 213 l~~~~~--G~~--~~L~~~~~~~p~~-~~~~~eVlV~V~a~gin~~D~~~~~G~~---~~~~~lG~E~aG--~V~~vG~~ 282 (795)
T 3slk_A 213 LEATRP--GSL--DGLALVDEPTATA-PLGDGEVRIAMRAAGVNFRDALIALGMY---PGVASLGSEGAG--VVVETGPG 282 (795)
T ss_dssp EEESST--TSS--TTEEECCCHHHHS-CCCSSEEEEEEEEEEECHHHHHHTTTCC---SSCCCSCCCEEE--EEEEECSS
T ss_pred EecCCC--CCc--cceEEEeCCccCC-CCCCCEEEEEEEEEccCHHHHHHHcCCC---CCCccccceeEE--EEEEeCCC
Confidence 334445 666 5677766555545 5699999999999999999999988854 345689999776 99999999
Q ss_pred CCCCCCCCEEEec--cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHH
Q 019332 90 NPEFKKGDLVWGM--TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQ 167 (342)
Q Consensus 90 v~~~~vGd~V~~~--g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~ 167 (342)
|++|++||||+++ |+|++|++++.+.++++ |+++++. ++|++++.++|||+++.+.+++++|++|||+|++|++|+
T Consensus 283 V~~~~vGDrV~~~~~G~~ae~~~v~~~~~~~i-P~~ls~~-~AA~l~~~~~Ta~~al~~~a~l~~G~~VLI~gaaGgvG~ 360 (795)
T 3slk_A 283 VTGLAPGDRVMGMIPKAFGPLAVADHRMVTRI-PAGWSFA-RAASVPIVFLTAYYALVDLAGLRPGESLLVHSAAGGVGM 360 (795)
T ss_dssp CCSSCTTCEEEECCSSCSSSEEEEETTSEEEC-CTTCCHH-HHHHHHHHHHHHHCCCCCCTCCCTTCCEEEESTTBHHHH
T ss_pred CCcCCCCCEEEEEecCCCcCEEEeehHHEEEC-CCCCCHH-HHHhhhHHHHHHHHHHHHHhCCCCCCEEEEecCCCHHHH
Confidence 9999999999988 89999999999999999 9994433 388999999999999988899999999999999999999
Q ss_pred HHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCC
Q 019332 168 LVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHG 246 (342)
Q Consensus 168 ~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G 246 (342)
+++|+|+..|++|+++++++ |.+.+ ++|+++++|+++. ++.+.+++.+++ |+|+||||+|++.+..++++|+++|
T Consensus 361 ~aiqlAk~~Ga~V~~t~~~~-k~~~l--~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~gg~~~~~~l~~l~~~G 436 (795)
T 3slk_A 361 AAIQLARHLGAEVYATASED-KWQAV--ELSREHLASSRTC-DFEQQFLGATGGRGVDVVLNSLAGEFADASLRMLPRGG 436 (795)
T ss_dssp HHHHHHHHTTCCEEEECCGG-GGGGS--CSCGGGEECSSSS-THHHHHHHHSCSSCCSEEEECCCTTTTHHHHTSCTTCE
T ss_pred HHHHHHHHcCCEEEEEeChH-Hhhhh--hcChhheeecCCh-hHHHHHHHHcCCCCeEEEEECCCcHHHHHHHHHhcCCC
Confidence 99999999999999999766 55554 3899999999998 999999999998 9999999999999999999999999
Q ss_pred EEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHH
Q 019332 247 RIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY-YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIG 325 (342)
Q Consensus 247 ~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~ 325 (342)
+++.+|..... .........+++++.++.+... +....+.++++++++.+|.+++.+..+|+++++++|++.
T Consensus 437 r~v~iG~~~~~-------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~~~~l~~~g~l~p~~~~~~~l~~~~eA~~~ 509 (795)
T 3slk_A 437 RFLELGKTDVR-------DPVEVADAHPGVSYQAFDTVEAGPQRIGEMLHELVELFEGRVLEPLPVTAWDVRQAPEALRH 509 (795)
T ss_dssp EEEECCSTTCC-------CHHHHHHHSSSEEEEECCGGGGHHHHHHHHHHHHHHHHHTTSCCCCCEEEEEGGGHHHHHHH
T ss_pred EEEEecccccc-------CcccccccCCCCEEEEeeccccCHHHHHHHHHHHHHHHHcCCcCCCcceeEcHHHHHHHHHH
Confidence 99999864321 1111222346777766654322 344567899999999999999999999999999999999
Q ss_pred HHcCCccceEEEEecC
Q 019332 326 LFSGRNVGKQVVAVAP 341 (342)
Q Consensus 326 ~~~~~~~gkvvv~~~~ 341 (342)
+++++..||+||++.+
T Consensus 510 l~~g~~~GKvVl~~~~ 525 (795)
T 3slk_A 510 LSQARHVGKLVLTMPP 525 (795)
T ss_dssp HHHTCCCBEEEEECCC
T ss_pred HhcCCccceEEEecCc
Confidence 9999999999999753
|
| >1iz0_A Quinone oxidoreductase; APO-enzyme, riken structural genomics/proteomics initiative, RSGI, structural genomics; 2.30A {Thermus thermophilus} SCOP: b.35.1.2 c.2.1.1 PDB: 1iyz_A 2cf2_D | Back alignment and structure |
|---|
Probab=100.00 E-value=2.1e-47 Score=337.01 Aligned_cols=294 Identities=22% Similarity=0.251 Sum_probs=244.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCC-ccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGS-YVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~-~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ |.|. .++ ++|.| .++++||+|||.++|||++|++.+.|.++. ..+|.++|||++| +|+
T Consensus 1 Mka~~~~~~--g~~~----~l~--~~~~p-~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~p~i~G~e~~G--~V~- 68 (302)
T 1iz0_A 1 MKAWVLKRL--GGPL----ELV--DLPEP-EAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVG--VVE- 68 (302)
T ss_dssp CEEEEECST--TSCE----EEE--ECCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEE--EET-
T ss_pred CeEEEEcCC--CCch----heE--ECCCC-CCCCCEEEEEEEEEecCHHHHHHhCCCCCCCCCCCCcccceEEE--EEE-
Confidence 589999988 7772 455 56666 458999999999999999999998886542 3578999999777 774
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCC
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~ 162 (342)
||||++. |+|+||++++++.++++ |+++++. ++|+++++++|||+++.+.+ +++|++|||+|++
T Consensus 69 ----------GdrV~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~l~~~~~ta~~~l~~~~-~~~g~~vlV~Ga~ 135 (302)
T 1iz0_A 69 ----------GRRYAALVPQGGLAERVAVPKGALLPL-PEGLSPE-EAAAFPVSFLTAYLALKRAQ-ARPGEKVLVQAAA 135 (302)
T ss_dssp ----------TEEEEEECSSCCSBSEEEEEGGGCEEC-CTTCCHH-HHHTSHHHHHHHHHHHHHTT-CCTTCEEEESSTT
T ss_pred ----------CcEEEEecCCcceeeEEEEcHHHcEeC-CCCCCHH-HHHHhhhHHHHHHHHHHHhc-CCCCCEEEEECCC
Confidence 9999998 89999999999999999 9994443 37899999999999997667 9999999999999
Q ss_pred cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC-chhHHHHHHHHCCCCccEEEeCCChhhHHHHHHh
Q 019332 163 GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE-EPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLN 241 (342)
Q Consensus 163 g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~-~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~ 241 (342)
|++|++++|+|+..|++|+++++++++++.++ ++|++.++|+++ . ++.+.+ +++|++|| +|++.+..++++
T Consensus 136 G~vG~~~~~~a~~~Ga~Vi~~~~~~~~~~~~~-~~ga~~~~~~~~~~-~~~~~~-----~~~d~vid-~g~~~~~~~~~~ 207 (302)
T 1iz0_A 136 GALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEVP-ERAKAW-----GGLDLVLE-VRGKEVEESLGL 207 (302)
T ss_dssp BHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGHH-HHHHHT-----TSEEEEEE-CSCTTHHHHHTT
T ss_pred cHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-hcCCCEEEECCcch-hHHHHh-----cCceEEEE-CCHHHHHHHHHh
Confidence 99999999999999999999999999999998 899999999876 5 665554 46999999 999899999999
Q ss_pred hhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHH---HHHcCCceeeeeeeecccc
Q 019332 242 MKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP---HIKEGKIVYVEDMAEGLES 318 (342)
Q Consensus 242 l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~g~~~~~~~~~~~l~~ 318 (342)
++++|+++.+|...+.. ...+...++.+++++.++....+ ....+.++++++ ++.+|.+++.+..+|++++
T Consensus 208 l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~g~~~~~~-~~~~~~~~~~~~~~~l~~~g~l~~~i~~~~~l~~ 281 (302)
T 1iz0_A 208 LAHGGRLVYIGAAEGEV-----APIPPLRLMRRNLAVLGFWLTPL-LREGALVEEALGFLLPRLGRELRPVVGPVFPFAE 281 (302)
T ss_dssp EEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH-TTCHHHHHHHHHHHGGGBTTTBCCCEEEEEEGGG
T ss_pred hccCCEEEEEeCCCCCC-----CCcCHHHHHhCCCeEEEEeccch-hhhHHHHHHHHhhhHHHHcCCcccccceEEcHHH
Confidence 99999999998765421 12334456788999988765432 223567888899 9999999999989999999
Q ss_pred HHHHHHHHHcCCccceEEEEe
Q 019332 319 APATLIGLFSGRNVGKQVVAV 339 (342)
Q Consensus 319 ~~~a~~~~~~~~~~gkvvv~~ 339 (342)
+++|++.+.+++..||+|+++
T Consensus 282 ~~~A~~~~~~~~~~gKvvv~~ 302 (302)
T 1iz0_A 282 AEAAFRALLDRGHTGKVVVRL 302 (302)
T ss_dssp HHHHHHHTTCTTCCBEEEEEC
T ss_pred HHHHHHHHHcCCCCceEEEeC
Confidence 999999999888889999864
|
| >2cdc_A Glucose dehydrogenase glucose 1-dehydrogenase, DHG-1; reductase, oxidoreductase, MDR family; HET: XYS XYP NAP; 1.50A {Sulfolobus solfataricus} PDB: 2cdb_A* 2cd9_A 2cda_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=4.7e-46 Score=336.84 Aligned_cols=299 Identities=15% Similarity=0.119 Sum_probs=243.5
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCC-CcEEEEEEeeecCccccccccc--CCCCccc---cCCCCCccccc
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGS-NGVLLKNLYLSCDPYMRPRMTN--IKGSYVE---SFKPGMPISGY 80 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~-~~VlIkv~~~~i~~~d~~~~~~--~~~~~~~---p~~~G~e~~G~ 80 (342)
|||+++.++ |.+ +++++ +|.| .+++ +||+|||.++|||++|++.+.| .++...+ |.++|||++|
T Consensus 1 MkA~~~~~~--g~~----l~~~~--~~~P-~~~~~~eVlVkv~a~gi~~~D~~~~~g~~~~~~~~~~~~p~v~G~E~~G- 70 (366)
T 2cdc_A 1 MKAIIVKPP--NAG----VQVKD--VDEK-KLDSYGKIKIRTIYNGICGADREIVNGKLTLSTLPKGKDFLVLGHEAIG- 70 (366)
T ss_dssp CEEEEECTT--SCC----CEEEE--CCGG-GSCCCSSEEEEEEEEEECHHHHHHHTTCC-------CCSCEECCSEEEE-
T ss_pred CeEEEEeCC--CCc----eEEEE--CcCC-CCCCCCEEEEEEEEEeeccccHHHHcCCCCCCCCCcCCCCCcCCcceEE-
Confidence 589999988 653 57765 4555 3478 9999999999999999999988 4433345 8999999777
Q ss_pred EEEEEecCCCCCCCCCCEEEe---------------------------------ccccceeEeecCCcceeecCCCCCcc
Q 019332 81 GVAKVLDSENPEFKKGDLVWG---------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLS 127 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~---------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~ 127 (342)
+|++ ++ ++|++||||++ .|+|+||++++++.++++ |++++
T Consensus 71 -~V~~--~~-~~~~~GDrV~~~~~~~cg~C~~C~~g~~~~C~~~~~~~~g~~~~~G~~aey~~v~~~~~~~i-P~~l~-- 143 (366)
T 2cdc_A 71 -VVEE--SY-HGFSQGDLVMPVNRRGCGICRNCLVGRPDFCETGEFGEAGIHKMDGFMREWWYDDPKYLVKI-PKSIE-- 143 (366)
T ss_dssp -EECS--CC-SSCCTTCEEEECSEECCSSSHHHHTTCGGGCSSSCCEEETTBEECCSCBSEEEECGGGEEEE-CGGGT--
T ss_pred -EEEe--CC-CCCCCCCEEEEcCCCCCCCChhhhCcCcccCCCCCcccCCccCCCCceeEEEEechHHeEEC-cCCcc--
Confidence 8888 77 89999999985 278999999999999999 99954
Q ss_pred chhhccCCchhhHHHhhh--h--hcCCC--C-------CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh---hhHH
Q 019332 128 YYTGILGMPGMTAYAGFY--E--VCSPK--Q-------GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---DKID 191 (342)
Q Consensus 128 ~~~a~l~~~~~ta~~al~--~--~~~~~--~-------~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~---~~~~ 191 (342)
+.|+++.++.|||+++. + .++++ + |++|||+|+ |++|++++|+|+..|++|+++++++ ++.+
T Consensus 144 -~~Aal~~~~~ta~~al~~~~~~~~~~~~~~~~~~~~~g~~VlV~Ga-G~vG~~~~q~a~~~Ga~Vi~~~~~~~~~~~~~ 221 (366)
T 2cdc_A 144 -DIGILAQPLADIEKSIEEILEVQKRVPVWTCDDGTLNCRKVLVVGT-GPIGVLFTLLFRTYGLEVWMANRREPTEVEQT 221 (366)
T ss_dssp -TTGGGHHHHHHHHHHHHHHHHHGGGSSCCSCTTSSSTTCEEEEESC-HHHHHHHHHHHHHHTCEEEEEESSCCCHHHHH
T ss_pred -hhhhhcCcHHHHHHHHHhhhhcccCccccccccccCCCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCccchHHHH
Confidence 45568889999999996 3 67888 8 999999999 9999999999999999999999998 8889
Q ss_pred HHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-hhH-HHHHHhhhhCCEEEEEceeccccCCCCccccchH
Q 019332 192 LLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-KML-DAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM 269 (342)
Q Consensus 192 ~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~~~-~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~ 269 (342)
+++ ++|++.+ | ++ ++.+.+++ +++++|++||++|+ ..+ ..++++|+++|+++.+|..... .......
T Consensus 222 ~~~-~~ga~~v-~-~~--~~~~~~~~-~~~~~d~vid~~g~~~~~~~~~~~~l~~~G~iv~~g~~~~~-----~~~~~~~ 290 (366)
T 2cdc_A 222 VIE-ETKTNYY-N-SS--NGYDKLKD-SVGKFDVIIDATGADVNILGNVIPLLGRNGVLGLFGFSTSG-----SVPLDYK 290 (366)
T ss_dssp HHH-HHTCEEE-E-CT--TCSHHHHH-HHCCEEEEEECCCCCTHHHHHHGGGEEEEEEEEECSCCCSC-----EEEEEHH
T ss_pred HHH-HhCCcee-c-hH--HHHHHHHH-hCCCCCEEEECCCChHHHHHHHHHHHhcCCEEEEEecCCCC-----ccccChh
Confidence 998 9999887 7 44 55566666 44579999999999 577 8999999999999999875432 1233444
Q ss_pred H---HHhcceeeecceecccccchHHHHHHHHHHHHcCC------ceeeeeeeeccccHHHHHHHH-HcCCccceEEEEe
Q 019332 270 Y---LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK------IVYVEDMAEGLESAPATLIGL-FSGRNVGKQVVAV 339 (342)
Q Consensus 270 ~---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~------~~~~~~~~~~l~~~~~a~~~~-~~~~~~gkvvv~~ 339 (342)
. ++.+++++.++.... .+.++++++++.+|. +++.+..+|+|+++++|++.+ .+++..||+||++
T Consensus 291 ~~~~~~~~~~~i~g~~~~~-----~~~~~~~~~l~~~g~i~~~~~~~~~i~~~~~l~~~~~A~~~l~~~~~~~gKvvi~~ 365 (366)
T 2cdc_A 291 TLQEIVHTNKTIIGLVNGQ-----KPHFQQAVVHLASWKTLYPKAAKMLITKTVSINDEKELLKVLREKEHGEIKIRILW 365 (366)
T ss_dssp HHHHHHHTTCEEEECCCCC-----HHHHHHHHHHHHHHHHHSHHHHTTSEEEEEETTCHHHHHHHHHCCCTTCCEEEEEC
T ss_pred hhHHHHhcCcEEEEecCCC-----HHHHHHHHHHHHcCCCCcccchhhcEEEEEcHHHHHHHHHHHhhhcCCceEEEEec
Confidence 4 788899998875543 677899999999999 557778889999999999984 3366789999987
Q ss_pred c
Q 019332 340 A 340 (342)
Q Consensus 340 ~ 340 (342)
+
T Consensus 366 ~ 366 (366)
T 2cdc_A 366 E 366 (366)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >2vz8_A Fatty acid synthase; transferase, phosphopantetheine, multienzyme, megasynthase, fatty acid synthesis; 3.2A {Sus scrofa} PDB: 2vz9_A* | Back alignment and structure |
|---|
Probab=100.00 E-value=8.4e-37 Score=327.56 Aligned_cols=281 Identities=21% Similarity=0.243 Sum_probs=237.6
Q ss_pred CCcEEEEEEeeecCcccccccccCCCCc-------cccCCCCCcccccEEEEEecCCCCCCCCCCEEEec---cccceeE
Q 019332 40 SNGVLLKNLYLSCDPYMRPRMTNIKGSY-------VESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGM---TGWEEYS 109 (342)
Q Consensus 40 ~~~VlIkv~~~~i~~~d~~~~~~~~~~~-------~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~~~---g~~~~~~ 109 (342)
++||+|||.++|+|+.|+....|..+.. ..|.++|+|++| +| ++||+|+++ |+|++|+
T Consensus 1559 ~~eVlVkV~aaglN~~Dv~~~~G~~~~~~~p~~~~~~~~~lG~E~aG--~V----------~vGdrV~g~~~~G~~Aeyv 1626 (2512)
T 2vz8_A 1559 CQDRLCSVYYTSLNFRDVMLATGKLSPDSIPGKWLTRDCMLGMEFSG--RD----------ASGRRVMGMVPAEGLATSV 1626 (2512)
T ss_dssp HHTTEEEEEEEECCHHHHHHHHTSSCGGGCCSCCSCSSSCCCCEEEE--EE----------TTSCCEEEECSSCCSBSEE
T ss_pred CCceEEEEEecccCHHHHHHHhCCCccccccccccccCCceEEEEEE--EE----------ccCCEEEEeecCCceeeEE
Confidence 7899999999999999999888865321 235689999777 65 389999987 7999999
Q ss_pred eecCCcceeecCCCCCccch-hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 110 LVTAPQLFKIQHTDVPLSYY-TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 110 ~v~~~~~~~i~p~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
+++.+.++++ |++ ++++ +|+++++++|||+++.+.+++++|++|||+||+|++|++++|+|+..|++|++++++++
T Consensus 1627 ~vp~~~v~~i-Pd~--ls~~eAA~lp~~~~TA~~al~~~a~l~~Ge~VLI~gaaGgVG~aAiqlAk~~Ga~Viat~~s~~ 1703 (2512)
T 2vz8_A 1627 LLLQHATWEV-PST--WTLEEAASVPIVYTTAYYSLVVRGRMQPGESVLIHSGSGGVGQAAIAIALSRGCRVFTTVGSAE 1703 (2512)
T ss_dssp ECCGGGEEEC-CTT--SCHHHHTTSHHHHHHHHHHHTTTTCCCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHH
T ss_pred EcccceEEEe-CCC--CCHHHHHHhHHHHHHHHHHHHHHhcCCCCCEEEEEeCChHHHHHHHHHHHHcCCEEEEEeCChh
Confidence 9999999999 999 5554 88889999999999988899999999999999999999999999999999999999999
Q ss_pred hHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCcc
Q 019332 189 KIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEG 264 (342)
Q Consensus 189 ~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~ 264 (342)
|.+++++. +|+++++++++. ++.+.+++.+++ |+|+||||.+++.+..++++++++|+++.+|..... ..
T Consensus 1704 k~~~l~~~~~~lga~~v~~~~~~-~~~~~i~~~t~g~GvDvVld~~g~~~l~~~l~~L~~~Gr~V~iG~~~~~-----~~ 1777 (2512)
T 2vz8_A 1704 KRAYLQARFPQLDETCFANSRDT-SFEQHVLRHTAGKGVDLVLNSLAEEKLQASVRCLAQHGRFLEIGKFDLS-----NN 1777 (2512)
T ss_dssp HHHHHHHHCTTCCSTTEEESSSS-HHHHHHHHTTTSCCEEEEEECCCHHHHHHHHTTEEEEEEEEECCCHHHH-----TT
T ss_pred hhHHHHhhcCCCCceEEecCCCH-HHHHHHHHhcCCCCceEEEECCCchHHHHHHHhcCCCcEEEEeeccccc-----cc
Confidence 99999842 678899999988 999999999988 899999999999999999999999999999864322 11
Q ss_pred ccchHHHHhcceeeecceeccc----ccchHHHHHHHHHHHHcCCceeeeeeeeccccHHHHHHHHHcCCccceEEEEec
Q 019332 265 VHNLMYLVTKRVRMEGFLVRDY----YHLYPKFLEMIIPHIKEGKIVYVEDMAEGLESAPATLIGLFSGRNVGKQVVAVA 340 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~g~~~~~~~~~~~l~~~~~a~~~~~~~~~~gkvvv~~~ 340 (342)
.......+.+++++.+..+..+ +....+.++.+.+.+.+|.+++.+..+|+++++.+|++.+.+++..||+|+.++
T Consensus 1778 ~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~l~~l~~~~~~g~l~p~i~~~f~l~ei~eA~~~l~~g~~~GKvVi~~~ 1857 (2512)
T 2vz8_A 1778 HALGMAVFLKNVTFHGILLDSLFEEGGATWQEVSELLKAGIQEGVVQPLKCTVFPRTKVEAAFRYMAQGKHIGKVVIQVR 1857 (2512)
T ss_dssp CEEEGGGGGGCCEEEECCGGGTTSSCCHHHHHHHHHHHHHHTTTCSCCCCEEEEESSTHHHHHHHHHTTCCSSEEEEECS
T ss_pred CcccccccccCCcEEEeeHHHHhhhCHHHHHHHHHHHHHHHHcCCcCCCcceEecHHHHHHHHHhhhccCccceEEEECC
Confidence 1223445678888888765443 223345566666667789999988899999999999999999999999999986
Q ss_pred C
Q 019332 341 P 341 (342)
Q Consensus 341 ~ 341 (342)
+
T Consensus 1858 ~ 1858 (2512)
T 2vz8_A 1858 E 1858 (2512)
T ss_dssp C
T ss_pred C
Confidence 4
|
| >1pqw_A Polyketide synthase; rossmann fold, dimer, structural genomics, PSI, protein STRU initiative; 2.66A {Mycobacterium tuberculosis} SCOP: c.2.1.1 | Back alignment and structure |
|---|
Probab=99.92 E-value=3e-24 Score=177.25 Aligned_cols=191 Identities=21% Similarity=0.327 Sum_probs=143.8
Q ss_pred CcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHH
Q 019332 114 PQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLL 193 (342)
Q Consensus 114 ~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~ 193 (342)
+.++++ |+++++. ++|+++++++|||+++.+.+++++|++|||+|++|++|++++|+++..|++|+++++++++.+.+
T Consensus 2 ~~~~~~-P~~~~~~-~aa~~~~~~~ta~~~l~~~~~~~~g~~vlV~Ga~ggiG~~~~~~~~~~G~~V~~~~~~~~~~~~~ 79 (198)
T 1pqw_A 2 DLVVPI-PDTLADN-EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREML 79 (198)
T ss_dssp -------------C-HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHH
T ss_pred CceeEC-CCCCCHH-HHHHhhHHHHHHHHHHHHHhCCCCCCEEEEeeCCChHHHHHHHHHHHcCCEEEEEeCCHHHHHHH
Confidence 467899 9994444 37788889999999997778999999999999999999999999999999999999999998888
Q ss_pred HHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHH
Q 019332 194 KNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLV 272 (342)
Q Consensus 194 ~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~ 272 (342)
+ ++|++.++|+.+. ++.+.+.+.+.+ ++|+++|++|...+..++++++++|+++.+|...... ...... ..+
T Consensus 80 ~-~~g~~~~~d~~~~-~~~~~~~~~~~~~~~D~vi~~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~----~~~~~~-~~~ 152 (198)
T 1pqw_A 80 S-RLGVEYVGDSRSV-DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVYA----DASLGL-AAL 152 (198)
T ss_dssp H-TTCCSEEEETTCS-THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGTT----TCEEEG-GGG
T ss_pred H-HcCCCEEeeCCcH-HHHHHHHHHhCCCCCeEEEECCchHHHHHHHHHhccCCEEEEEcCCCCcC----cCcCCh-hHh
Confidence 8 8999888898887 888888888766 8999999999888999999999999999999755310 111111 234
Q ss_pred hcceeeecceecc----cccchHHHHHHHHHHHHcCCceeeeeee
Q 019332 273 TKRVRMEGFLVRD----YYHLYPKFLEMIIPHIKEGKIVYVEDMA 313 (342)
Q Consensus 273 ~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~g~~~~~~~~~ 313 (342)
.+++++.++.... .+....+.++++++++.+|++++.+..+
T Consensus 153 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~g~l~~~~~~~ 197 (198)
T 1pqw_A 153 AKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKLEVLPVTA 197 (198)
T ss_dssp TTTCEEEECCHHHHHHHCHHHHHHHHHHHHHHHHTTSSCCCCCC-
T ss_pred cCCcEEEEEehHHhhccCHHHHHHHHHHHHHHHHcCCccCCCCCc
Confidence 6777776543311 1122356789999999999999876544
|
| >1pjc_A Protein (L-alanine dehydrogenase); oxidoreductase, NAD; HET: NAD; 2.00A {Phormidium lapideum} SCOP: c.2.1.4 c.23.12.2 PDB: 1pjb_A* 1say_A | Back alignment and structure |
|---|
Probab=98.92 E-value=6.2e-09 Score=93.14 Aligned_cols=145 Identities=14% Similarity=0.048 Sum_probs=97.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+++|+|+|+ |++|+++++.++.+|++|+++++++++.+.++ +++... +++++.. ++.+.++ ++|++|||+
T Consensus 167 ~~~VlViGa-GgvG~~aa~~a~~~Ga~V~v~dr~~~r~~~~~-~~~~~~~~~~~~~~~-~~~~~~~-----~~DvVI~~~ 238 (361)
T 1pjc_A 167 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLE-TLFGSRVELLYSNSA-EIETAVA-----EADLLIGAV 238 (361)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HHHGGGSEEEECCHH-HHHHHHH-----TCSEEEECC
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HhhCceeEeeeCCHH-HHHHHHc-----CCCEEEECC
Confidence 489999998 99999999999999999999999999999888 665543 3444433 5555443 499999999
Q ss_pred Chhh-------HHHHHHhhhhCCEEEEEceeccccCCCC-ccccchHHHHhcceeeeccee-ccc-c----cch-HHHHH
Q 019332 231 GGKM-------LDAVLLNMKIHGRIAVCGMISQYNLDRP-EGVHNLMYLVTKRVRMEGFLV-RDY-Y----HLY-PKFLE 295 (342)
Q Consensus 231 g~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~-~~~-~----~~~-~~~~~ 295 (342)
+... ....++.++++|+++.++...+.+.... ........+..+++++.+... ... + ..+ ...+.
T Consensus 239 ~~~~~~~~~li~~~~~~~~~~g~~ivdv~~~~gg~~e~~~~~~~~~~~~~~~~v~~~~~~~lp~~~~~~~s~~~~~~~~~ 318 (361)
T 1pjc_A 239 LVPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCVETLHPTSHTQPTYEVFGVVHYGVPNMPGAVPWTATQALNNSTLP 318 (361)
T ss_dssp CCTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSBTTCCCCCSSSCEEEETTEEEECCSCGGGGCHHHHHHHHHHHHHH
T ss_pred CcCCCCCCeecCHHHHhhCCCCCEEEEEecCCCCCCccccCCCCCCCEEEECCEEEEEeCCcchhhHHHHHHHHHHHHHH
Confidence 8633 5677889999999999987544321100 011122223345666655321 111 1 111 34567
Q ss_pred HHHHHHHcCC
Q 019332 296 MIIPHIKEGK 305 (342)
Q Consensus 296 ~~~~~~~~g~ 305 (342)
.+++++.+|.
T Consensus 319 ~l~~l~~~G~ 328 (361)
T 1pjc_A 319 YVVKLANQGL 328 (361)
T ss_dssp HHHHHHHHGG
T ss_pred HHHHHHhCCc
Confidence 7888888773
|
| >1gpj_A Glutamyl-tRNA reductase; tRNA-dependent tetrapyrrole biosynthesis; HET: GMC CIT; 1.95A {Methanopyrus kandleri} SCOP: a.151.1.1 c.2.1.7 d.58.39.1 | Back alignment and structure |
|---|
Probab=98.87 E-value=7.8e-11 Score=107.05 Aligned_cols=166 Identities=13% Similarity=0.079 Sum_probs=119.1
Q ss_pred CCCcccccEEEEEecCCCCCCCCCCEEEe------------ccccceeEeecCCcceeecCCCCCccchhhccCCchhhH
Q 019332 73 PGMPISGYGVAKVLDSENPEFKKGDLVWG------------MTGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTA 140 (342)
Q Consensus 73 ~G~e~~G~g~v~~vG~~v~~~~vGd~V~~------------~g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta 140 (342)
.|+|..+ .+..+|++++++.+|+.++. .|++++|+..+...++.+ |++ +..+.+....+..++
T Consensus 77 ~g~~a~~--~i~~v~~Glds~~vGe~~Il~qvk~~~~~~~~~G~~~~~~~~~~~~a~~~-~k~--v~~~~~~~~~~~s~a 151 (404)
T 1gpj_A 77 RGSEAVR--HLFRVASGLESMMVGEQEILRQVKKAYDRAARLGTLDEALKIVFRRAINL-GKR--AREETRISEGAVSIG 151 (404)
T ss_dssp EHHHHHH--HHHHHHTTTTSSSTTCHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHH-HHH--HHHHSSTTCSCCSHH
T ss_pred cCchHhh--hheeeccCCCCCcCCcchhHHHHHHHHHHHHHcCCchHHHHHHHHHHhhh-hcc--CcchhhhcCCCccHH
Confidence 5666444 78889999999999998731 177888888888888888 877 444333345567788
Q ss_pred HHhhhhhcC---CCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhH-HHHHHHcCCCeeEecCCchhHHHHH
Q 019332 141 YAGFYEVCS---PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKI-DLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 141 ~~al~~~~~---~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~-~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+.++..... -.+|++|+|+|+ |++|.++++.++..|+ +|+++.++.++. ++++ ++|++ ++++. ++.+.+
T Consensus 152 ~~av~~a~~~~~~l~g~~VlIiGa-G~iG~~~a~~l~~~G~~~V~v~~r~~~ra~~la~-~~g~~-~~~~~---~l~~~l 225 (404)
T 1gpj_A 152 SAAVELAERELGSLHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELAR-DLGGE-AVRFD---ELVDHL 225 (404)
T ss_dssp HHHHHHHHHHHSCCTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHH-HHTCE-ECCGG---GHHHHH
T ss_pred HHHHHHHHHHhccccCCEEEEECh-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHH-HcCCc-eecHH---hHHHHh
Confidence 887743221 257899999997 9999999999999999 999999999887 4555 88875 34432 444433
Q ss_pred HHHCCCCccEEEeCCCh-hhH--HHHHHh--h--hhCCEEEEEcee
Q 019332 216 KRYFPEGIDIYFENVGG-KML--DAVLLN--M--KIHGRIAVCGMI 254 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~-~~~--~~~~~~--l--~~~G~~v~~g~~ 254 (342)
. ++|+|++|++. ..+ ...++. + +++|.++.++..
T Consensus 226 ~-----~aDvVi~at~~~~~~~~~~~l~~~~lk~r~~~~~v~vdia 266 (404)
T 1gpj_A 226 A-----RSDVVVSATAAPHPVIHVDDVREALRKRDRRSPILIIDIA 266 (404)
T ss_dssp H-----TCSEEEECCSSSSCCBCHHHHHHHHHHCSSCCCEEEEECC
T ss_pred c-----CCCEEEEccCCCCceecHHHHHHHHHhccCCCCEEEEEcc
Confidence 2 48999999987 322 134444 4 456777777653
|
| >2vhw_A Alanine dehydrogenase; NAD, secreted, oxidoreductase; HET: NAI; 2.0A {Mycobacterium tuberculosis} PDB: 2vhx_A* 2vhy_A 2vhz_A* 2vhv_A* 2voe_A 2voj_A* | Back alignment and structure |
|---|
Probab=98.79 E-value=5.6e-08 Score=87.35 Aligned_cols=99 Identities=19% Similarity=0.148 Sum_probs=77.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++.+|+|+|+ |++|+++++.++.+|++|+++++++++.+.+++.+|.....++....++.+.++ ++|++++|++
T Consensus 167 ~g~~V~ViG~-G~iG~~~a~~a~~~Ga~V~~~d~~~~~l~~~~~~~g~~~~~~~~~~~~l~~~l~-----~aDvVi~~~~ 240 (377)
T 2vhw_A 167 EPADVVVIGA-GTAGYNAARIANGMGATVTVLDINIDKLRQLDAEFCGRIHTRYSSAYELEGAVK-----RADLVIGAVL 240 (377)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSSEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHHHhcCCeeEeccCCHHHHHHHHc-----CCCEEEECCC
Confidence 5789999998 999999999999999999999999999888873478753233322214444443 3899999997
Q ss_pred hhh-------HHHHHHhhhhCCEEEEEceecc
Q 019332 232 GKM-------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 232 ~~~-------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.+. ....++.++++|.+++++...+
T Consensus 241 ~p~~~t~~li~~~~l~~mk~g~~iV~va~~~G 272 (377)
T 2vhw_A 241 VPGAKAPKLVSNSLVAHMKPGAVLVDIAIDQG 272 (377)
T ss_dssp CTTSCCCCCBCHHHHTTSCTTCEEEEGGGGTT
T ss_pred cCCCCCcceecHHHHhcCCCCcEEEEEecCCC
Confidence 633 5778899999999999986443
|
| >2eez_A Alanine dehydrogenase; TTHA0216, structural genomic NPPSFA, national project on protein structural and function analyses; 2.71A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=98.78 E-value=8.7e-08 Score=85.95 Aligned_cols=148 Identities=16% Similarity=0.093 Sum_probs=90.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++.+|+|+|+ |++|+++++.++..|++|+++++++++.+.+++.+|.....+..+..++.+.++ ++|++++|++
T Consensus 165 ~~~~V~ViGa-G~iG~~~a~~l~~~Ga~V~~~d~~~~~~~~~~~~~g~~~~~~~~~~~~l~~~~~-----~~DvVi~~~g 238 (369)
T 2eez_A 165 APASVVILGG-GTVGTNAAKIALGMGAQVTILDVNHKRLQYLDDVFGGRVITLTATEANIKKSVQ-----HADLLIGAVL 238 (369)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTTTSEEEEECCHHHHHHHHH-----HCSEEEECCC
T ss_pred CCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHhcCceEEEecCCHHHHHHHHh-----CCCEEEECCC
Confidence 4589999998 999999999999999999999999998888873477753333333214444443 4899999999
Q ss_pred hhh-------HHHHHHhhhhCCEEEEEceeccccCCCC-ccccchHHHHhcceeeecceec-cc-cc----c-hHHHHHH
Q 019332 232 GKM-------LDAVLLNMKIHGRIAVCGMISQYNLDRP-EGVHNLMYLVTKRVRMEGFLVR-DY-YH----L-YPKFLEM 296 (342)
Q Consensus 232 ~~~-------~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~-~~-~~----~-~~~~~~~ 296 (342)
... ....++.++++|.++.++...+..++.. +.......+..+++++.+.... .. +. . ....++.
T Consensus 239 ~~~~~~~~li~~~~l~~mk~gg~iV~v~~~~gg~~d~~ep~~~~~~~~~~~~v~~~~v~~lp~~~p~~as~~~~~~~~~~ 318 (369)
T 2eez_A 239 VPGAKAPKLVTRDMLSLMKEGAVIVDVAVDQGGCVETIRPTTHAEPTYVVDGVVHYGVANMPGAVPRTSTFALTNQTLPY 318 (369)
T ss_dssp -------CCSCHHHHTTSCTTCEEEECC-------------------CEETTEEEECCSCSGGGSHHHHHHHHHHHHHHH
T ss_pred CCccccchhHHHHHHHhhcCCCEEEEEecCCCCCCCcccCCCCCCCEEEECCEEEEeeCCcchhcHHHHHHHHHHHHHHH
Confidence 642 5678889999999999987543211110 0111112233456665553211 00 11 1 1345677
Q ss_pred HHHHHHcCC
Q 019332 297 IIPHIKEGK 305 (342)
Q Consensus 297 ~~~~~~~g~ 305 (342)
+++++.+|.
T Consensus 319 l~~l~~~g~ 327 (369)
T 2eez_A 319 VLKLAEKGL 327 (369)
T ss_dssp HHHHHHHTT
T ss_pred HHHHHhcCh
Confidence 777777764
|
| >1l7d_A Nicotinamide nucleotide transhydrogenase, subunit alpha 1; transhydrogenase domain I, oxidoreductase; 1.81A {Rhodospirillum rubrum} SCOP: c.2.1.4 c.23.12.2 PDB: 1hzz_A* 1f8g_A 1l7e_A* 1u28_A* 1u2d_A* 1u2g_A* 1xlt_A* 2oo5_A* 2oor_A* 2frd_A* 2fsv_A* 1nm5_A* 2fr8_A* 1ptj_A* | Back alignment and structure |
|---|
Probab=98.70 E-value=3.9e-08 Score=88.70 Aligned_cols=125 Identities=17% Similarity=0.137 Sum_probs=84.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCc--------------hh----HH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEE--------------PD----LN 212 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~--------------~~----~~ 212 (342)
++.+|+|+|+ |.+|++++++++.+|++|++.++++++.+.++ ++|++.+ ++..+. .+ ..
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~~~d~~~~~~~~~~-~~Ga~~~~i~~~~~~~~~~~~~~~~~~s~~~~~~~~ 248 (384)
T 1l7d_A 171 PPARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQA 248 (384)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeecccccccccccccchhhcCHHHHhhhH
Confidence 6889999996 99999999999999999999999999888888 7998644 233110 00 11
Q ss_pred HHHHHHCCCCccEEEeCC---Chh---h-HHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecce
Q 019332 213 EALKRYFPEGIDIYFENV---GGK---M-LDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFL 282 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~---g~~---~-~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 282 (342)
+.+.+... ++|++++|+ |.. . ....++.+++++.++.++...+..... ..+...+..+++++.+..
T Consensus 249 ~~l~~~~~-~aDvVi~~~~~pg~~~~~li~~~~l~~mk~g~vivdva~~~gg~~~~---~~~~~~~~~~~v~i~g~~ 321 (384)
T 1l7d_A 249 EAVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNCPL---SEPGKIVVKHGVKIVGHT 321 (384)
T ss_dssp HHHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSSTT---CCTTCEEEETTEEEECCS
T ss_pred HHHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCCEEEEEecCCCCCeec---ccCCcEEEECCEEEEEeC
Confidence 22444333 499999999 532 2 367888999999999998754422211 011112345677777653
|
| >3ce6_A Adenosylhomocysteinase; protein-substrate complex, dimer of dimers, NAD binding DOMA amino acid insertional region, hydrolase; HET: ADN NAD; 1.60A {Mycobacterium tuberculosis} PDB: 3dhy_A* 2zj0_A* 2ziz_A* 2zj1_A* | Back alignment and structure |
|---|
Probab=98.55 E-value=2.8e-07 Score=84.90 Aligned_cols=104 Identities=21% Similarity=0.195 Sum_probs=82.3
Q ss_pred hhhHHHhhhhhc-CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 137 GMTAYAGFYEVC-SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 137 ~~ta~~al~~~~-~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
..++++++.+.. ...+|++|+|.|. |.+|..+++.++.+|++|+++.+++.+.+.++ ++|++ ++ ++.+.+
T Consensus 257 ~~s~~~g~~r~~~~~l~GktV~IiG~-G~IG~~~A~~lka~Ga~Viv~d~~~~~~~~A~-~~Ga~-~~------~l~e~l 327 (494)
T 3ce6_A 257 RHSLIDGINRGTDALIGGKKVLICGY-GDVGKGCAEAMKGQGARVSVTEIDPINALQAM-MEGFD-VV------TVEEAI 327 (494)
T ss_dssp HHHHHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-EC------CHHHHG
T ss_pred hhhhhHHHHhccCCCCCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCE-Ee------cHHHHH
Confidence 345666664432 3789999999996 99999999999999999999999999888887 88984 22 222222
Q ss_pred HHHCCCCccEEEeCCCh-hhHH-HHHHhhhhCCEEEEEcee
Q 019332 216 KRYFPEGIDIYFENVGG-KMLD-AVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~ 254 (342)
.++|+|++|.|. ..+. ..++.++++|+++.+|..
T Consensus 328 -----~~aDvVi~atgt~~~i~~~~l~~mk~ggilvnvG~~ 363 (494)
T 3ce6_A 328 -----GDADIVVTATGNKDIIMLEHIKAMKDHAILGNIGHF 363 (494)
T ss_dssp -----GGCSEEEECSSSSCSBCHHHHHHSCTTCEEEECSSS
T ss_pred -----hCCCEEEECCCCHHHHHHHHHHhcCCCcEEEEeCCC
Confidence 248999999998 4454 788999999999999874
|
| >1x13_A NAD(P) transhydrogenase subunit alpha; NAD(H)-binding domain, rossmann fold, oxidoreductase; 1.90A {Escherichia coli} PDB: 1x14_A* 1x15_A* 2bru_A* | Back alignment and structure |
|---|
Probab=98.43 E-value=9.1e-07 Score=79.96 Aligned_cols=124 Identities=17% Similarity=0.183 Sum_probs=82.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecC-------------CchhH----HH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYK-------------EEPDL----NE 213 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~-------------~~~~~----~~ 213 (342)
++.+|+|+|+ |.+|++++++++.+|++|++++++.++.+.++ ++|+..+ ++.. .. ++ .+
T Consensus 171 ~g~~V~ViGa-G~iG~~aa~~a~~~Ga~V~v~D~~~~~~~~~~-~lGa~~~~~~~~~~~~~~~g~~~~~~~-~~~~~~~~ 247 (401)
T 1x13_A 171 PPAKVMVIGA-GVAGLAAIGAANSLGAIVRAFDTRPEVKEQVQ-SMGAEFLELDFKEEAGSGDGYAKVMSD-AFIKAEME 247 (401)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCGGGHHHHH-HTTCEECCC--------CCHHHHHHSH-HHHHHHHH
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCEEEEecccccccccccchhhccH-HHHHHHHH
Confidence 5789999997 99999999999999999999999999988887 8988543 1211 01 11 11
Q ss_pred HHHHHCCCCccEEEeCC---Ch---h-hHHHHHHhhhhCCEEEEEceeccccCCCCccccchH-HHHhcceeeecce
Q 019332 214 ALKRYFPEGIDIYFENV---GG---K-MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLM-YLVTKRVRMEGFL 282 (342)
Q Consensus 214 ~i~~~~~~~~d~vid~~---g~---~-~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 282 (342)
.+.+... ++|+||+++ |. . .....++.+++++.++.++...+...... .... .+..+++++.+..
T Consensus 248 ~l~e~~~-~aDvVI~~~~~pg~~ap~li~~~~l~~mk~g~vIVdva~~~Gg~v~~~---~~~~p~~~~~gv~i~g~~ 320 (401)
T 1x13_A 248 LFAAQAK-EVDIIVTTALIPGKPAPKLITREMVDSMKAGSVIVDLAAQNGGNCEYT---VPGEIFTTENGVKVIGYT 320 (401)
T ss_dssp HHHHHHH-HCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSBTTC---CTTSEEECTTSCEEECCS
T ss_pred HHHHHhC-CCCEEEECCccCCCCCCeeeCHHHHhcCCCCcEEEEEcCCCCCCcCcc---cCCCceEEECCEEEEeeC
Confidence 2333322 489999995 31 1 23578899999999999997543222111 0011 1345677777653
|
| >4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=98.40 E-value=1.1e-06 Score=74.87 Aligned_cols=106 Identities=17% Similarity=0.218 Sum_probs=76.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.+++|... ..|-.+..+..+.+.+... |++|++
T Consensus 28 ~gKvalVTGas~GIG~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiL 107 (273)
T 4fgs_A 28 NAKIAVITGATSGIGLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQADSANLAELDRLYEKVKAEAGRIDVL 107 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCEEEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 57899999999999999999999999999999999998887765777532 2344444222222222221 369999
Q ss_pred EeCCChh-----------h---------------HHHHHHhhhhCCEEEEEceeccc
Q 019332 227 FENVGGK-----------M---------------LDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 227 id~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
++++|.. . ...+++.|+++|++|.+++....
T Consensus 108 VNNAG~~~~~~~~~~~~e~w~~~~~vNl~g~~~~~~~~~p~m~~~G~IInisS~~~~ 164 (273)
T 4fgs_A 108 FVNAGGGSMLPLGEVTEEQYDDTFDRNVKGVLFTVQKALPLLARGSSVVLTGSTAGS 164 (273)
T ss_dssp EECCCCCCCCCTTSCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGGG
T ss_pred EECCCCCCCCChhhccHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCeEEEEeehhhc
Confidence 9999841 1 23455677788999999876553
|
| >3oj0_A Glutr, glutamyl-tRNA reductase; structural genomics, PSI-2, protein structure initiative, MI center for structural genomics, MCSG; HET: MSE SO4; 1.65A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=98.24 E-value=6.3e-07 Score=69.03 Aligned_cols=109 Identities=9% Similarity=0.086 Sum_probs=76.9
Q ss_pred chhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 136 PGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 136 ~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
+.++++.++.. .....+.+|+|+|+ |.+|.+.++.++..|++|++..+++++.+.+.++++.. +..+. ++.+.+
T Consensus 5 ~~sv~~~a~~~-~~~~~~~~v~iiG~-G~iG~~~a~~l~~~g~~v~v~~r~~~~~~~~a~~~~~~-~~~~~---~~~~~~ 78 (144)
T 3oj0_A 5 KVSIPSIVYDI-VRKNGGNKILLVGN-GMLASEIAPYFSYPQYKVTVAGRNIDHVRAFAEKYEYE-YVLIN---DIDSLI 78 (144)
T ss_dssp CCSHHHHHHHH-HHHHCCCEEEEECC-SHHHHHHGGGCCTTTCEEEEEESCHHHHHHHHHHHTCE-EEECS---CHHHHH
T ss_pred cccHHHHHHHH-HHhccCCEEEEECC-CHHHHHHHHHHHhCCCEEEEEcCCHHHHHHHHHHhCCc-eEeec---CHHHHh
Confidence 44566777643 33344899999996 99999999988888999999999998877655478853 23333 334444
Q ss_pred HHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceec
Q 019332 216 KRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
. ++|+|++|++..........+++++.++.++.+.
T Consensus 79 ~-----~~Divi~at~~~~~~~~~~~l~~g~~vid~~~p~ 113 (144)
T 3oj0_A 79 K-----NNDVIITATSSKTPIVEERSLMPGKLFIDLGNPP 113 (144)
T ss_dssp H-----TCSEEEECSCCSSCSBCGGGCCTTCEEEECCSSC
T ss_pred c-----CCCEEEEeCCCCCcEeeHHHcCCCCEEEEccCCc
Confidence 3 3899999999742111226788888998887643
|
| >2yvl_A TRMI protein, hypothetical protein; tRNA, methyltransferase, S-adenosylmethionine, structural GE NPPSFA; HET: SAM; 2.20A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=98.22 E-value=1.2e-06 Score=73.97 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=71.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC-CC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF-PE 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~-~~ 221 (342)
...++.++++||..|+ | .|..++.+++. +.+|++++.+++..+.+++. .+...-++.... ++. +.. .+
T Consensus 85 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~----~~~~~~ 156 (248)
T 2yvl_A 85 LKLNLNKEKRVLEFGT-G-SGALLAVLSEV-AGEVWTFEAVEEFYKTAQKNLKKFNLGKNVKFFNV-DFK----DAEVPE 156 (248)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHH-SSEEEEECSCHHHHHHHHHHHHHTTCCTTEEEECS-CTT----TSCCCT
T ss_pred HhcCCCCCCEEEEeCC-C-ccHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCCcEEEEEc-Chh----hcccCC
Confidence 4567889999999995 5 69999999988 88999999999888877732 243111111111 221 112 23
Q ss_pred -CccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 222 -GIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 -~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+|+|+...+. ..+..+.+.|+++|+++....
T Consensus 157 ~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 191 (248)
T 2yvl_A 157 GIFHAAFVDVREPWHYLEKVHKSLMEGAPVGFLLP 191 (248)
T ss_dssp TCBSEEEECSSCGGGGHHHHHHHBCTTCEEEEEES
T ss_pred CcccEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 79999987765 578899999999999987654
|
| >3f9i_A 3-oxoacyl-[acyl-carrier-protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase, FAT biosynthesis, lipid synthesis, NADP; 2.25A {Rickettsia prowazekii} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.16 E-value=2.2e-05 Score=66.15 Aligned_cols=81 Identities=21% Similarity=0.331 Sum_probs=57.9
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCCCCccEE
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
-.++.+|||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.... ..|..+...+.+.+++. +++|++
T Consensus 11 ~~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~--~~id~l 88 (249)
T 3f9i_A 11 DLTGKTSLITGASSGIGSAIARLLHKLGSKVIISGSNEEKLKSLGNALKDNYTIEVCNLANKEECSNLISKT--SNLDIL 88 (249)
T ss_dssp CCTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHTC--SCCSEE
T ss_pred cCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhccCccEEEcCCCCHHHHHHHHHhc--CCCCEE
Confidence 3567899999999999999999888899999999999988877664555422 22334431222222222 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 89 i~~Ag~ 94 (249)
T 3f9i_A 89 VCNAGI 94 (249)
T ss_dssp EECCC-
T ss_pred EECCCC
Confidence 999983
|
| >4eso_A Putative oxidoreductase; NADP, structural genomics, PSI-biology, NEW structural genomics research consortium, nysgrc; HET: MSE NAP; 1.91A {Sinorhizobium meliloti} PDB: 3vc7_A | Back alignment and structure |
|---|
Probab=98.16 E-value=7.1e-06 Score=69.55 Aligned_cols=105 Identities=14% Similarity=0.181 Sum_probs=71.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHH---HHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNE---ALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~---~i~~~~~~~~d~ 225 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.. .+.+.. +++|+
T Consensus 7 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~ 85 (255)
T 4eso_A 7 QGKKAIVIGGTHGMGLATVRRLVEGGAEVLLTGRNESNIARIREEFGPRVHALRSDIADLNEIAVLGAAAGQTL-GAIDL 85 (255)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHH-SSEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCcceEEEccCCCHHHHHHHHHHHHHHh-CCCCE
Confidence 5689999999999999999999889999999999998887776566542 1 234444312222 222222 36999
Q ss_pred EEeCCChh-----------h---------------HHHHHHhhhhCCEEEEEceeccc
Q 019332 226 YFENVGGK-----------M---------------LDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 226 vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
+++++|.. . .+.+.+.++++|+++.+++....
T Consensus 86 lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~~~ 143 (255)
T 4eso_A 86 LHINAGVSELEPFDQVSEASYDRQFAVNTKGAFFTVQRLTPLIREGGSIVFTSSVADE 143 (255)
T ss_dssp EEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCGGGS
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCEEEEECChhhc
Confidence 99998731 1 12233345567999999876553
|
| >3ged_A Short-chain dehydrogenase/reductase SDR; SCOR, rossmann fold, oxidoreductase; 1.70A {Clostridium thermocellum atcc 27405} PDB: 3geg_A* | Back alignment and structure |
|---|
Probab=98.15 E-value=1.8e-05 Score=66.36 Aligned_cols=103 Identities=13% Similarity=0.032 Sum_probs=69.8
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIYFE 228 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~vid 228 (342)
.+|||+||++|+|.+.++.+...|++|+++++++++.+.+. +.+.. . ..|-.+..+..+.+.+... |++|++++
T Consensus 3 K~vlVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~g~iDiLVN 81 (247)
T 3ged_A 3 RGVIVTGGGHGIGKQICLDFLEAGDKVCFIDIDEKRSADFA-KERPNLFYFHGDVADPLTLKKFVEYAMEKLQRIDVLVN 81 (247)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-TTCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CEEEEecCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhcCCEEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 68999999999999999999999999999999998887776 33332 1 2344443222222222221 36999999
Q ss_pred CCChh-----------h---------------HHHHHHhh-hhCCEEEEEceeccc
Q 019332 229 NVGGK-----------M---------------LDAVLLNM-KIHGRIAVCGMISQY 257 (342)
Q Consensus 229 ~~g~~-----------~---------------~~~~~~~l-~~~G~~v~~g~~~~~ 257 (342)
++|.. . ...+.+.| +.+|++|.+++....
T Consensus 82 NAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~~~m~~~~G~IInisS~~~~ 137 (247)
T 3ged_A 82 NACRGSKGILSSLLYEEFDYILSVGLKAPYELSRLCRDELIKNKGRIINIASTRAF 137 (247)
T ss_dssp CCCCCCCCGGGTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEECCGGGT
T ss_pred CCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhcCCcEEEEeecccc
Confidence 99731 1 12333444 457999999886653
|
| >3ic5_A Putative saccharopine dehydrogenase; structural genomics, APC63807.2, N-terminal domain, saccharo dehydrogenase, PSI-2; HET: MSE; 2.08A {Ruegeria pomeroyi} | Back alignment and structure |
|---|
Probab=98.15 E-value=4.4e-05 Score=55.98 Aligned_cols=93 Identities=14% Similarity=0.161 Sum_probs=65.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+.+|+|+|+ |.+|..+++.+...| .+|+++++++++.+.+. ..+... ..|..+. +.+.+... ++|+||+|
T Consensus 4 ~~~~v~I~G~-G~iG~~~~~~l~~~g~~~v~~~~r~~~~~~~~~-~~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~ 76 (118)
T 3ic5_A 4 MRWNICVVGA-GKIGQMIAALLKTSSNYSVTVADHDLAALAVLN-RMGVATKQVDAKDE----AGLAKALG-GFDAVISA 76 (118)
T ss_dssp TCEEEEEECC-SHHHHHHHHHHHHCSSEEEEEEESCHHHHHHHH-TTTCEEEECCTTCH----HHHHHHTT-TCSEEEEC
T ss_pred CcCeEEEECC-CHHHHHHHHHHHhCCCceEEEEeCCHHHHHHHH-hCCCcEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence 3468999999 999999999999999 69999999999888777 666543 2334332 33444433 59999999
Q ss_pred CChhhHHHHHH-hhhhCCEEEEE
Q 019332 230 VGGKMLDAVLL-NMKIHGRIAVC 251 (342)
Q Consensus 230 ~g~~~~~~~~~-~l~~~G~~v~~ 251 (342)
++........+ +++.+.+++.+
T Consensus 77 ~~~~~~~~~~~~~~~~g~~~~~~ 99 (118)
T 3ic5_A 77 APFFLTPIIAKAAKAAGAHYFDL 99 (118)
T ss_dssp SCGGGHHHHHHHHHHTTCEEECC
T ss_pred CCchhhHHHHHHHHHhCCCEEEe
Confidence 98754444444 44445555543
|
| >4fn4_A Short chain dehydrogenase; NADH-binding, rossmann fold, oxidoreductase; HET: NAD; 1.75A {Sulfolobus acidocaldarius} | Back alignment and structure |
|---|
Probab=98.10 E-value=1.8e-05 Score=66.74 Aligned_cols=106 Identities=21% Similarity=0.316 Sum_probs=71.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe---eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE---AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
+|.++||+||++|+|.+.++.+...|++|+.+++++++.+.+.++ .|... ..|-.+..+..+.+.+... |++
T Consensus 6 ~gKvalVTGas~GIG~aiA~~la~~Ga~Vv~~~~~~~~~~~~~~~i~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~i 85 (254)
T 4fn4_A 6 KNKVVIVTGAGSGIGRAIAKKFALNDSIVVAVELLEDRLNQIVQELRGMGKEVLGVKADVSKKKDVEEFVRRTFETYSRI 85 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 478999999999999999998889999999999999887655433 34421 2344444233222222221 369
Q ss_pred cEEEeCCCh-h-----------h---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 224 DIYFENVGG-K-----------M---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 224 d~vid~~g~-~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
|++++++|. . . .+.+++.|++ +|++|.+++..+.
T Consensus 86 DiLVNNAGi~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~~g~ 148 (254)
T 4fn4_A 86 DVLCNNAGIMDGVTPVAEVSDELWERVLAVNLYSAFYSSRAVIPIMLKQGKGVIVNTASIAGI 148 (254)
T ss_dssp CEEEECCCCCCTTCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CEEEECCcccCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCcEEEEEechhhc
Confidence 999999882 1 1 1334555533 6899999886653
|
| >3grp_A 3-oxoacyl-(acyl carrierprotein) reductase; structural genomics, oxidoreductase, S structural genomics center for infectious disease, ssgcid; 2.09A {Bartonella henselae} PDB: 3enn_A 3emk_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.3e-05 Score=65.88 Aligned_cols=81 Identities=22% Similarity=0.345 Sum_probs=58.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-e--EecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-A--FNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v--~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++... . .|..+..++.+.+.+... +++|++
T Consensus 26 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (266)
T 3grp_A 26 TGRKALVTGATGGIGEAIARCFHAQGAIVGLHGTREDKLKEIAADLGKDVFVFSANLSDRKSIKQLAEVAEREMEGIDIL 105 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCSSEEEEECCTTSHHHHHHHHHHHHHHHTSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEeecCCHHHHHHHHHHHHHHcCCCCEE
Confidence 56899999999999999999999999999999999988776654666532 1 244443122222222211 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 106 vnnAg~ 111 (266)
T 3grp_A 106 VNNAGI 111 (266)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >4e6p_A Probable sorbitol dehydrogenase (L-iditol 2-dehyd; NAD(P)-binding, structural genomics, PSI-biology; HET: MSE; 2.10A {Sinorhizobium meliloti} PDB: 1k2w_A | Back alignment and structure |
|---|
Probab=98.09 E-value=3.4e-05 Score=65.42 Aligned_cols=80 Identities=14% Similarity=0.219 Sum_probs=57.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHH---HHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEAL---KRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i---~~~~~~~~d~ 225 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++... ..|..+..++.+.+ .+.. +++|+
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~id~ 85 (259)
T 4e6p_A 7 EGKSALITGSARGIGRAFAEAYVREGATVAIADIDIERARQAAAEIGPAAYAVQMDVTRQDSIDAAIAATVEHA-GGLDI 85 (259)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHS-SSCCE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCCceEEEeeCCCHHHHHHHHHHHHHHc-CCCCE
Confidence 46799999999999999999888899999999999888776654665421 23444442233223 3322 36999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 86 lv~~Ag~ 92 (259)
T 4e6p_A 86 LVNNAAL 92 (259)
T ss_dssp EEECCCC
T ss_pred EEECCCc
Confidence 9999983
|
| >3rwb_A TPLDH, pyridoxal 4-dehydrogenase; short chain dehydrogenase/reductase, 4-pyridoxola NAD+, oxidoreductase; HET: NAD 4PL; 1.70A {Mesorhizobium loti} PDB: 3ndr_A* 3nug_A* | Back alignment and structure |
|---|
Probab=98.09 E-value=2.3e-05 Score=66.05 Aligned_cols=79 Identities=16% Similarity=0.258 Sum_probs=57.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHH---HHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLN---EALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~---~~i~~~~~~~~d~ 225 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+..++. +.+.+.. +++|+
T Consensus 5 ~gk~vlVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~id~ 83 (247)
T 3rwb_A 5 AGKTALVTGAAQGIGKAIAARLAADGATVIVSDINAEGAKAAAASIGKKARAIAADISDPGSVKALFAEIQALT-GGIDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEECCCCTTCHHHHHHHHHHHHHHH-SCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHC-CCCCE
Confidence 46899999999999999999999999999999999988776664666432 13444431222 2233222 36999
Q ss_pred EEeCCC
Q 019332 226 YFENVG 231 (342)
Q Consensus 226 vid~~g 231 (342)
+++++|
T Consensus 84 lv~nAg 89 (247)
T 3rwb_A 84 LVNNAS 89 (247)
T ss_dssp EEECCC
T ss_pred EEECCC
Confidence 999998
|
| >4g81_D Putative hexonate dehydrogenase; enzyme function initiative, EFI, structural genomics, dehydr oxidoreductase; 1.90A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=98.08 E-value=1.5e-05 Score=67.33 Aligned_cols=106 Identities=17% Similarity=0.242 Sum_probs=71.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe---eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE---AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.++ .|... ..|-.++.+..+.+.+.. .|++
T Consensus 8 ~gKvalVTGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~l~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~i 87 (255)
T 4g81_D 8 TGKTALVTGSARGLGFAYAEGLAAAGARVILNDIRATLLAESVDTLTRKGYDAHGVAFDVTDELAIEAAFSKLDAEGIHV 87 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 578999999999999999999999999999999998876554433 34321 134444423333333322 2369
Q ss_pred cEEEeCCChh--------------------------hHHHHHHhh-h--hCCEEEEEceeccc
Q 019332 224 DIYFENVGGK--------------------------MLDAVLLNM-K--IHGRIAVCGMISQY 257 (342)
Q Consensus 224 d~vid~~g~~--------------------------~~~~~~~~l-~--~~G~~v~~g~~~~~ 257 (342)
|++++++|.. ....+++.+ + .+|++|.+++....
T Consensus 88 DiLVNNAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~~G~IVnisS~~~~ 150 (255)
T 4g81_D 88 DILINNAGIQYRKPMVELELENWQKVIDTNLTSAFLVSRSAAKRMIARNSGGKIINIGSLTSQ 150 (255)
T ss_dssp CEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred cEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHccCCCEEEEEeehhhc
Confidence 9999999831 123345555 2 35899999886653
|
| >4dyv_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.80A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=98.07 E-value=2.5e-05 Score=66.86 Aligned_cols=81 Identities=16% Similarity=0.199 Sum_probs=57.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+..++.+.+.+... +++|++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 106 (272)
T 4dyv_A 27 GKKIAIVTGAGSGVGRAVAVALAGAGYGVALAGRRLDALQETAAEIGDDALCVPTDVTDPDSVRALFTATVEKFGRVDVL 106 (272)
T ss_dssp -CCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTSCCEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 5678999999999999999988889999999999998877666466532 2 2344444222222222211 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 107 VnnAg~ 112 (272)
T 4dyv_A 107 FNNAGT 112 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999884
|
| >4dry_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.06 E-value=1.6e-05 Score=68.35 Aligned_cols=80 Identities=19% Similarity=0.307 Sum_probs=54.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-e--eEecCCchhHHH---HHHHHCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-E--AFNYKEEPDLNE---ALKRYFPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~---~i~~~~~~ 221 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+ .+.+.. +
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g 110 (281)
T 4dry_A 32 EGRIALVTGGGTGVGRGIAQALSAEGYSVVITGRRPDVLDAAAGEIGGRTGNIVRAVVCDVGDPDQVAALFAAVRAEF-A 110 (281)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCeEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 5789999999999999999988889999999999988766554333 111 1 234444422222 232222 3
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 111 ~iD~lvnnAG~ 121 (281)
T 4dry_A 111 RLDLLVNNAGS 121 (281)
T ss_dssp CCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 69999999884
|
| >4b79_A PA4098, probable short-chain dehydrogenase; oxidoreductase, infectious disease, structure-based inhibito; HET: NAD; 1.98A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=98.05 E-value=1.5e-05 Score=66.60 Aligned_cols=104 Identities=15% Similarity=0.168 Sum_probs=70.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC-CeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF-DEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
=.|.++||+|+++|+|.+.++.+...|++|+++++++++.+... .-.+ ....|-.+. +-.+.+-+.. |++|+++++
T Consensus 9 f~GK~alVTGas~GIG~aia~~la~~Ga~Vv~~~~~~~~~~~~~-~~~~~~~~~Dv~~~-~~v~~~~~~~-g~iDiLVNN 85 (242)
T 4b79_A 9 YAGQQVLVTGGSSGIGAAIAMQFAELGAEVVALGLDADGVHAPR-HPRIRREELDITDS-QRLQRLFEAL-PRLDVLVNN 85 (242)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTSTTSCC-CTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEEC
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHhhhh-cCCeEEEEecCCCH-HHHHHHHHhc-CCCCEEEEC
Confidence 36899999999999999999999999999999999877654322 1111 122344554 3333333333 469999999
Q ss_pred CCh-h--------h---------------HHHHHHhhh-hCCEEEEEceeccc
Q 019332 230 VGG-K--------M---------------LDAVLLNMK-IHGRIAVCGMISQY 257 (342)
Q Consensus 230 ~g~-~--------~---------------~~~~~~~l~-~~G~~v~~g~~~~~ 257 (342)
+|. . . .+.+.+.++ .+|++|.+++....
T Consensus 86 AGi~~~~~~~~~~~w~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~~ 138 (242)
T 4b79_A 86 AGISRDREEYDLATFERVLRLNLSAAMLASQLARPLLAQRGGSILNIASMYST 138 (242)
T ss_dssp CCCCCGGGGGSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCEEEEEECCGGGT
T ss_pred CCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCeEEEEeecccc
Confidence 983 1 1 133445564 47999999886653
|
| >3p2y_A Alanine dehydrogenase/pyridine nucleotide transhy; seattle structural genomics center for infectious disease, S tuberculosis; 1.82A {Mycobacterium smegmatis str} | Back alignment and structure |
|---|
Probab=98.05 E-value=1e-05 Score=71.83 Aligned_cols=105 Identities=16% Similarity=0.111 Sum_probs=76.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-e--------cCC---c---hhHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-N--------YKE---E---PDLNEALK 216 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~--------~~~---~---~~~~~~i~ 216 (342)
++.+|+|+|+ |.+|+.+++.++.+|++|++.+++.++++.++ ++|++.+- + |.. . ..-.+.+.
T Consensus 183 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~lGa~~~~l~~~~~~~~gya~~~~~~~~~~~~~~l~ 260 (381)
T 3p2y_A 183 KPASALVLGV-GVAGLQALATAKRLGAKTTGYDVRPEVAEQVR-SVGAQWLDLGIDAAGEGGYARELSEAERAQQQQALE 260 (381)
T ss_dssp CCCEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSGGGHHHHH-HTTCEECCCC-------------CHHHHHHHHHHHH
T ss_pred CCCEEEEECc-hHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HcCCeEEeccccccccccchhhhhHHHHhhhHHHHH
Confidence 6789999997 99999999999999999999999999999998 88875321 1 000 0 00112233
Q ss_pred HHCCCCccEEEeCCChh-------hHHHHHHhhhhCCEEEEEceeccccC
Q 019332 217 RYFPEGIDIYFENVGGK-------MLDAVLLNMKIHGRIAVCGMISQYNL 259 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~~ 259 (342)
+... ++|+||.++..+ .....++.+++++.++.++...+.+.
T Consensus 261 e~l~-~aDIVI~tv~iPg~~ap~Lvt~emv~~MkpGsVIVDvA~d~GG~~ 309 (381)
T 3p2y_A 261 DAIT-KFDIVITTALVPGRPAPRLVTAAAATGMQPGSVVVDLAGETGGNC 309 (381)
T ss_dssp HHHT-TCSEEEECCCCTTSCCCCCBCHHHHHTSCTTCEEEETTGGGTCSB
T ss_pred HHHh-cCCEEEECCCCCCcccceeecHHHHhcCCCCcEEEEEeCCCCCcc
Confidence 3222 599999986321 24688899999999999987665544
|
| >3gvc_A Oxidoreductase, probable short-chain type dehydrogenase/reductase; ssgcid, decode, niaid, UWPPG, SBRI, structural genomics; 2.45A {Mycobacterium tuberculosis} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.9e-05 Score=66.65 Aligned_cols=81 Identities=20% Similarity=0.300 Sum_probs=57.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+.. .+++|++
T Consensus 28 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 107 (277)
T 3gvc_A 28 AGKVAIVTGAGAGIGLAVARRLADEGCHVLCADIDGDAADAAATKIGCGAAACRVDVSDEQQIIAMVDACVAAFGGVDKL 107 (277)
T ss_dssp TTCEEEETTTTSTHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCSSCEEEECCTTCHHHHHHHHHHHHHHHSSCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCcceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999999999999999988888999999999988877666466542 2 234444422222222221 1369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 108 vnnAg~ 113 (277)
T 3gvc_A 108 VANAGV 113 (277)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999984
|
| >4dio_A NAD(P) transhydrogenase subunit alpha PART 1; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.60A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=98.05 E-value=2.1e-05 Score=70.36 Aligned_cols=105 Identities=16% Similarity=0.136 Sum_probs=74.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-e------------cCCc--hhH----H
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-N------------YKEE--PDL----N 212 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~------------~~~~--~~~----~ 212 (342)
++.+|+|+|+ |.+|+.++++++.+|++|++.++++++++.++ ++|++.+- + |... ..+ .
T Consensus 189 ~~~kV~ViG~-G~iG~~aa~~a~~lGa~V~v~D~~~~~l~~~~-~~G~~~~~~~~~~~~d~~~~~~ya~e~s~~~~~~~~ 266 (405)
T 4dio_A 189 PAAKIFVMGA-GVAGLQAIATARRLGAVVSATDVRPAAKEQVA-SLGAKFIAVEDEEFKAAETAGGYAKEMSGEYQVKQA 266 (405)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSTTHHHHHH-HTTCEECCCCC-----------------CHHHHHHH
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HcCCceeecccccccccccccchhhhcchhhhhhhH
Confidence 5689999997 99999999999999999999999999999998 88874221 1 1110 000 1
Q ss_pred HHHHHHCCCCccEEEeCCChh-------hHHHHHHhhhhCCEEEEEceeccccC
Q 019332 213 EALKRYFPEGIDIYFENVGGK-------MLDAVLLNMKIHGRIAVCGMISQYNL 259 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~~-------~~~~~~~~l~~~G~~v~~g~~~~~~~ 259 (342)
+.+.+... +.|+||.|+..+ ..+..++.++++..+|.++...+.+.
T Consensus 267 ~~l~e~l~-~aDVVI~tvlipg~~ap~Lvt~emv~~Mk~GsVIVDvA~d~GG~~ 319 (405)
T 4dio_A 267 ALVAEHIA-KQDIVITTALIPGRPAPRLVTREMLDSMKPGSVVVDLAVERGGNI 319 (405)
T ss_dssp HHHHHHHH-TCSEEEECCCCSSSCCCCCBCHHHHTTSCTTCEEEETTGGGTCSB
T ss_pred hHHHHHhc-CCCEEEECCcCCCCCCCEEecHHHHhcCCCCCEEEEEeCCCCCCc
Confidence 12222221 489999996321 34678889999999999987554433
|
| >3tzq_B Short-chain type dehydrogenase/reductase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; 2.50A {Mycobacterium marinum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=98.05 E-value=3.5e-05 Score=65.85 Aligned_cols=81 Identities=15% Similarity=0.174 Sum_probs=57.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+..++.+.+.+... +++|++
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 89 (271)
T 3tzq_B 10 ENKVAIITGACGGIGLETSRVLARAGARVVLADLPETDLAGAAASVGRGAVHHVVDLTNEVSVRALIDFTIDTFGRLDIV 89 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSCHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCCeEEEECCCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999999999999999999899999999999988877665466642 12354444223222222211 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 90 v~nAg~ 95 (271)
T 3tzq_B 90 DNNAAH 95 (271)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 998883
|
| >2a4k_A 3-oxoacyl-[acyl carrier protein] reductase; reductase,hyperthermophIle, structural genomics, PSI, protei structure initiative; 2.30A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=98.04 E-value=3.8e-05 Score=65.35 Aligned_cols=81 Identities=7% Similarity=0.102 Sum_probs=56.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+... +.+|++
T Consensus 5 ~~k~vlITGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 84 (263)
T 2a4k_A 5 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 84 (263)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHHcCCCcEE
Confidence 4578999999999999999998889999999999988877665455422 1 2344443223332332211 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 85 vnnAg~ 90 (263)
T 2a4k_A 85 AHFAGV 90 (263)
T ss_dssp EEGGGG
T ss_pred EECCCC
Confidence 999884
|
| >3tjr_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, SCD, NAD; HET: UNL; 1.60A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.98 E-value=6.8e-05 Score=65.10 Aligned_cols=81 Identities=19% Similarity=0.325 Sum_probs=56.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
-.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+... ++
T Consensus 29 l~gk~vlVTGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (301)
T 3tjr_A 29 FDGRAAVVTGGASGIGLATATEFARRGARLVLSDVDQPALEQAVNGLRGQGFDAHGVVCDVRHLDEMVRLADEAFRLLGG 108 (301)
T ss_dssp STTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHhCCC
Confidence 35789999999999999999999899999999999988776654333 332 1 2344444223333332211 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 109 id~lvnnAg 117 (301)
T 3tjr_A 109 VDVVFSNAG 117 (301)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3m1a_A Putative dehydrogenase; short, PSI, MCSG, structural genomics, midwest center for structural genomics, protein structure initiative; 2.00A {Streptomyces avermitilis} | Back alignment and structure |
|---|
Probab=97.98 E-value=4.4e-05 Score=65.55 Aligned_cols=106 Identities=17% Similarity=0.272 Sum_probs=70.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++.. . ..|..+...+.+.+.+... +++|++
T Consensus 4 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~id~l 83 (281)
T 3m1a_A 4 SAKVWLVTGASSGFGRAIAEAAVAAGDTVIGTARRTEALDDLVAAYPDRAEAISLDVTDGERIDVVAADVLARYGRVDVL 83 (281)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCSEE
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCceEEEeeCCCHHHHHHHHHHHHHhCCCCCEE
Confidence 4578999999999999999999889999999999988877666455542 2 2344443123322322211 369999
Q ss_pred EeCCChh-----------h---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 227 FENVGGK-----------M---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 227 id~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
++++|.. . ...+++.++. .|++|.+++....
T Consensus 84 v~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~~~~~iv~~sS~~~~ 142 (281)
T 3m1a_A 84 VNNAGRTQVGAFEETTERELRDLFELHVFGPARLTRALLPQMRERGSGSVVNISSFGGQ 142 (281)
T ss_dssp EECCCCEEECCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EECCCcCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCEEEEEcCcccc
Confidence 9999831 1 2334444433 5899999876543
|
| >2z1n_A Dehydrogenase; reductase, SDR, oxidoreductase; 1.80A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=97.98 E-value=4e-05 Score=65.05 Aligned_cols=80 Identities=19% Similarity=0.278 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHCCC-C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYFPE-G 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~~~-~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.+.... +
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (260)
T 2z1n_A 6 QGKLAVVTAGSSGLGFASALELARNGARLLLFSRNREKLEAAASRIASLVSGAQVDIVAGDIREPGDIDRLFEKARDLGG 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCeEEEEEccCCCHHHHHHHHHHHHHhcC
Confidence 4678999999999999999988888999999999987766544333 311 1 23444442333333333222 3
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 86 id~lv~~Ag 94 (260)
T 2z1n_A 86 ADILVYSTG 94 (260)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3ioy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structure initiative; 1.90A {Novosphingobium aromaticivorans DSM12444} | Back alignment and structure |
|---|
Probab=97.97 E-value=5e-05 Score=66.57 Aligned_cols=79 Identities=20% Similarity=0.299 Sum_probs=55.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC--C-e--eEecCCchhHHHH---HHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF--D-E--AFNYKEEPDLNEA---LKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~--~-~--v~~~~~~~~~~~~---i~~~~~ 220 (342)
.+.++||+||+|+||.+.++.+...|++|++++++.++.+.+.+++ +. . . ..|..+...+.+. +.+..
T Consensus 7 ~~k~vlVTGas~gIG~~la~~l~~~G~~Vv~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~- 85 (319)
T 3ioy_A 7 AGRTAFVTGGANGVGIGLVRQLLNQGCKVAIADIRQDSIDKALATLEAEGSGPEVMGVQLDVASREGFKMAADEVEARF- 85 (319)
T ss_dssp TTCEEEEETTTSTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCEEEEcCCchHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCeEEEEECCCCCHHHHHHHHHHHHHhC-
Confidence 4679999999999999999988889999999999998776554332 32 1 1 2344444223333 33322
Q ss_pred CCccEEEeCCC
Q 019332 221 EGIDIYFENVG 231 (342)
Q Consensus 221 ~~~d~vid~~g 231 (342)
+++|++++++|
T Consensus 86 g~id~lv~nAg 96 (319)
T 3ioy_A 86 GPVSILCNNAG 96 (319)
T ss_dssp CCEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999998
|
| >1hxh_A 3BETA/17BETA-hydroxysteroid dehydrogenase; alpha-beta, rossmann fold, short-chain dehydrogenase, oxidoreductase; 1.22A {Comamonas testosteroni} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.96 E-value=5.8e-05 Score=63.77 Aligned_cols=81 Identities=17% Similarity=0.159 Sum_probs=56.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+.. .+.+|++
T Consensus 5 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 84 (253)
T 1hxh_A 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRLGTLNVL 84 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHHCSCCEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999999999999988888999999999988776665455542 1 134444312332232221 1358999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 85 v~~Ag~ 90 (253)
T 1hxh_A 85 VNNAGI 90 (253)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >3fpf_A Mtnas, putative uncharacterized protein; thermonicotianamine, nicotianamine, biosynthetic protein; HET: TNA MTA; 1.66A {Methanothermobacter thermautotrophicusorganism_taxid} PDB: 3fpe_A* 3fph_A* 3fpg_A* 3fpj_A* 3o31_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=2.5e-05 Score=66.92 Aligned_cols=100 Identities=14% Similarity=0.093 Sum_probs=72.3
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCCc
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
.++++++++||.+|. |+.++.++.+++..|++|++++.+++..+.+++. .|.+. +..... +..+ +..+.|
T Consensus 117 la~l~~g~rVLDIGc-G~G~~ta~~lA~~~ga~V~gIDis~~~l~~Ar~~~~~~gl~~-v~~v~g-Da~~----l~d~~F 189 (298)
T 3fpf_A 117 LGRFRRGERAVFIGG-GPLPLTGILLSHVYGMRVNVVEIEPDIAELSRKVIEGLGVDG-VNVITG-DETV----IDGLEF 189 (298)
T ss_dssp HTTCCTTCEEEEECC-CSSCHHHHHHHHTTCCEEEEEESSHHHHHHHHHHHHHHTCCS-EEEEES-CGGG----GGGCCC
T ss_pred HcCCCCcCEEEEECC-CccHHHHHHHHHccCCEEEEEECCHHHHHHHHHHHHhcCCCC-eEEEEC-chhh----CCCCCc
Confidence 468899999999995 7777888888888899999999999988877732 35432 222111 2111 123479
Q ss_pred cEEEeCCCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 224 DIYFENVGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 224 d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
|+|+.+... ..+..+.+.|+|+|+++....
T Consensus 190 DvV~~~a~~~d~~~~l~el~r~LkPGG~Lvv~~~ 223 (298)
T 3fpf_A 190 DVLMVAALAEPKRRVFRNIHRYVDTETRIIYRTY 223 (298)
T ss_dssp SEEEECTTCSCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CEEEECCCccCHHHHHHHHHHHcCCCcEEEEEcC
Confidence 999865543 368889999999999987654
|
| >1nff_A Putative oxidoreductase RV2002; directed evolution, GFP, SDR, hydroxysteroid dehydrogenase, structural genomics, PSI; HET: NAD; 1.80A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1nfq_A* 1nfr_A* | Back alignment and structure |
|---|
Probab=97.95 E-value=4.7e-05 Score=64.64 Aligned_cols=80 Identities=13% Similarity=0.177 Sum_probs=55.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+... +++|++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~iD~l 85 (260)
T 1nff_A 6 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 85 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhcCceEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999999999999988888999999999988776654344321 1 2344443233333332211 369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 86 v~~Ag 90 (260)
T 1nff_A 86 VNNAG 90 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >1iy8_A Levodione reductase; oxidoreductase; HET: NAD; 1.60A {Leifsonia aquatica} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.95 E-value=8.5e-05 Score=63.23 Aligned_cols=80 Identities=15% Similarity=0.177 Sum_probs=54.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+
T Consensus 12 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 91 (267)
T 1iy8_A 12 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 91 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHHHcC
Confidence 4678999999999999999988888999999999987765543232 432 1 134444323333333221 13
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 92 ~id~lv~nAg 101 (267)
T 1iy8_A 92 RIDGFFNNAG 101 (267)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999987
|
| >4fs3_A Enoyl-[acyl-carrier-protein] reductase [NADPH] FA; rossmann fold, short chain dehydrogenase, NADPH binding, oxidoreductase; HET: 0WD 0WE; 1.80A {Staphylococcus aureus subsp} PDB: 3gr6_A* 3gns_A* 4all_A* 3gnt_A 4alk_A* 4alj_A* 4ali_A* 4alm_A 4aln_A | Back alignment and structure |
|---|
Probab=97.95 E-value=4.9e-05 Score=64.35 Aligned_cols=106 Identities=10% Similarity=0.096 Sum_probs=69.3
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC--e--eEecCCchhHHHHHHHHC--C
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD--E--AFNYKEEPDLNEALKRYF--P 220 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~--~--v~~~~~~~~~~~~i~~~~--~ 220 (342)
.|.++||+||+| |||.+.++.+...|++|+++.+++++.+.+.+ +++.. . ..|-.+..+..+.+.+.. -
T Consensus 5 ~gK~alVTGaa~~~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (256)
T 4fs3_A 5 ENKTYVIMGIANKRSIAFGVAKVLDQLGAKLVFTYRKERSRKELEKLLEQLNQPEAHLYQIDVQSDEEVINGFEQIGKDV 84 (256)
T ss_dssp TTCEEEEECCCSTTCHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHGGGTCSSCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcEEEEEccCCCHHHHHHHHHHHHHHh
Confidence 578999999876 89999999999999999999999877665543 23322 1 234444323322222221 1
Q ss_pred CCccEEEeCCChh---------------hH---------------HHHHHhhhhCCEEEEEceeccc
Q 019332 221 EGIDIYFENVGGK---------------ML---------------DAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 221 ~~~d~vid~~g~~---------------~~---------------~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
|++|++++++|.. .+ ....+.++.+|++|.+++....
T Consensus 85 G~iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~~~~vn~~~~~~~~~~~~~~~~~~G~IVnisS~~~~ 151 (256)
T 4fs3_A 85 GNIDGVYHSIAFANMEDLRGRFSETSREGFLLAQDISSYSLTIVAHEAKKLMPEGGSIVATTYLGGE 151 (256)
T ss_dssp CCCSEEEECCCCCCGGGGTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCTTCEEEEEEECGGGT
T ss_pred CCCCEEEeccccccccccccccccCCHHHHHHHHHHHHHHHHHHHHHHHHHhccCCEEEEEeccccc
Confidence 3699999988720 11 1123445678999999876653
|
| >1g0o_A Trihydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, dinucleotide binding fold, oxidoreductase; HET: NDP PYQ; 1.70A {Magnaporthe grisea} SCOP: c.2.1.2 PDB: 1doh_A* 1g0n_A* 1ybv_A* | Back alignment and structure |
|---|
Probab=97.94 E-value=6.4e-05 Score=64.64 Aligned_cols=104 Identities=20% Similarity=0.284 Sum_probs=66.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHH----HHHHcCCC-e--eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDL----LKNKFGFD-E--AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~----~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||+|++|.++++.+...|++|++++++.++ .+. ++ +.+.. . ..|..+..++.+.+.+.. .+
T Consensus 28 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~-~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g 106 (283)
T 1g0o_A 28 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIK-KNGSDAACVKANVGVVEDIVRMFEEAVKIFG 106 (283)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHH-HhCCCeEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 46799999999999999999998899999999987643 222 22 33432 1 134444312322222221 13
Q ss_pred CccEEEeCCChh-----------h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 222 GIDIYFENVGGK-----------M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++|++++++|.. . ...+.+.++..|++|.+++...
T Consensus 107 ~iD~lv~~Ag~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 167 (283)
T 1g0o_A 107 KLDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG 167 (283)
T ss_dssp CCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred CCCEEEECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHhcCCeEEEEechhh
Confidence 699999998831 1 1233444556799999987654
|
| >2gdz_A NAD+-dependent 15-hydroxyprostaglandin dehydrogen; dehydrogenase, structural genomics, SH dehydrogenase/reductase, inflammation; HET: NAD; 1.65A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.94 E-value=9.1e-05 Score=63.04 Aligned_cols=105 Identities=16% Similarity=0.146 Sum_probs=67.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC-----C-e--eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF-----D-E--AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~-----~-~--v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.. . . ..|..+..++.+.+.+.. .+
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 85 (267)
T 2gdz_A 6 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 85 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCcHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhcCCCceEEEecCCCCHHHHHHHHHHHHHHcC
Confidence 467899999999999999999988999999999988776544323321 1 1 124444312333332221 13
Q ss_pred CccEEEeCCCh---hhH---------------HHHHHhhhh-----CCEEEEEceecc
Q 019332 222 GIDIYFENVGG---KML---------------DAVLLNMKI-----HGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~---~~~---------------~~~~~~l~~-----~G~~v~~g~~~~ 256 (342)
.+|++++++|. +.+ ..+++.++. .|+++.+++...
T Consensus 86 ~id~lv~~Ag~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~~~~~~g~iv~isS~~~ 143 (267)
T 2gdz_A 86 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAG 143 (267)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CCCEEEECCCCCChhhHHHHHhHHHHHHHHHHHHHHHHHHhccCCCCCEEEEeCCccc
Confidence 59999999983 111 233444433 589999987654
|
| >3rkr_A Short chain oxidoreductase; rossmann fold; HET: NAP; 2.42A {Uncultured bacterium BIO5} | Back alignment and structure |
|---|
Probab=97.94 E-value=9.5e-05 Score=62.77 Aligned_cols=82 Identities=20% Similarity=0.285 Sum_probs=56.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
..+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+.
T Consensus 27 l~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 106 (262)
T 3rkr_A 27 LSGQVAVVTGASRGIGAAIARKLGSLGARVVLTARDVEKLRAVEREIVAAGGEAESHACDLSHSDAIAAFATGVLAAHGR 106 (262)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHhcCC
Confidence 35689999999999999999888888999999999988776554333 332 1 234444312322222221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 107 id~lv~~Ag~ 116 (262)
T 3rkr_A 107 CDVLVNNAGV 116 (262)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999884
|
| >3r6d_A NAD-dependent epimerase/dehydratase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, veillo parvula; HET: MLZ; 1.25A {Veillonella parvula dsm 2008} PDB: 4hng_A 4hnh_A* 3r14_A* | Back alignment and structure |
|---|
Probab=97.93 E-value=9.1e-05 Score=61.04 Aligned_cols=97 Identities=9% Similarity=0.039 Sum_probs=65.6
Q ss_pred CEEEEecCCcHHHHHHHHHHH-HcCCEEEEEeCChh-hHHHHHHHcCCC-ee--EecCCchhHHHHHHHHCCCCccEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKD-KIDLLKNKFGFD-EA--FNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~-~~ga~Vi~~~~s~~-~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+|||+||+|++|.+.++.+. ..|++|++++++++ +.+.+. ..+.. .+ .|..+. +.+.+... ++|++++
T Consensus 6 k~vlVtGasg~iG~~~~~~l~~~~g~~V~~~~r~~~~~~~~~~-~~~~~~~~~~~D~~d~----~~~~~~~~-~~d~vv~ 79 (221)
T 3r6d_A 6 XYITILGAAGQIAQXLTATLLTYTDMHITLYGRQLKTRIPPEI-IDHERVTVIEGSFQNP----GXLEQAVT-NAEVVFV 79 (221)
T ss_dssp SEEEEESTTSHHHHHHHHHHHHHCCCEEEEEESSHHHHSCHHH-HTSTTEEEEECCTTCH----HHHHHHHT-TCSEEEE
T ss_pred EEEEEEeCCcHHHHHHHHHHHhcCCceEEEEecCccccchhhc-cCCCceEEEECCCCCH----HHHHHHHc-CCCEEEE
Confidence 469999999999999888887 89999999999987 665543 22321 22 244443 23333332 5899999
Q ss_pred CCChhh--HHHHHHhhhhC--CEEEEEceecc
Q 019332 229 NVGGKM--LDAVLLNMKIH--GRIAVCGMISQ 256 (342)
Q Consensus 229 ~~g~~~--~~~~~~~l~~~--G~~v~~g~~~~ 256 (342)
++|... ...+++.++.. +++|.+++...
T Consensus 80 ~ag~~n~~~~~~~~~~~~~~~~~iv~iSs~~~ 111 (221)
T 3r6d_A 80 GAMESGSDMASIVKALSRXNIRRVIGVSMAGL 111 (221)
T ss_dssp SCCCCHHHHHHHHHHHHHTTCCEEEEEEETTT
T ss_pred cCCCCChhHHHHHHHHHhcCCCeEEEEeecee
Confidence 998622 44555555543 58998887543
|
| >3gvp_A Adenosylhomocysteinase 3; protein CO-factor complex, hydrolase, NAD, one-carbon metabolism, phosphoprotein; HET: NAD; 2.25A {Homo sapiens} PDB: 3mtg_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=3.9e-05 Score=68.85 Aligned_cols=101 Identities=21% Similarity=0.167 Sum_probs=75.5
Q ss_pred HHHhhhhhc-CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHH
Q 019332 140 AYAGFYEVC-SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 140 a~~al~~~~-~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 218 (342)
.+.++.+.. ..-.|.+|+|.|. |.+|...++.++.+|++|+++.+++.+...+. ..|... . ++.+.+.
T Consensus 206 ~~~gi~rat~~~L~GktV~ViG~-G~IGk~vA~~Lra~Ga~Viv~D~dp~ra~~A~-~~G~~v-~------~Leeal~-- 274 (435)
T 3gvp_A 206 ILDGLKRTTDMMFGGKQVVVCGY-GEVGKGCCAALKAMGSIVYVTEIDPICALQAC-MDGFRL-V------KLNEVIR-- 274 (435)
T ss_dssp HHHHHHHHHCCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-C------CHHHHTT--
T ss_pred HHHHHHHhhCceecCCEEEEEee-CHHHHHHHHHHHHCCCEEEEEeCChhhhHHHH-HcCCEe-c------cHHHHHh--
Confidence 344444433 3568999999997 99999999999999999999999887766665 666522 1 3333222
Q ss_pred CCCCccEEEeCCCh-hhHH-HHHHhhhhCCEEEEEcee
Q 019332 219 FPEGIDIYFENVGG-KMLD-AVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 219 ~~~~~d~vid~~g~-~~~~-~~~~~l~~~G~~v~~g~~ 254 (342)
..|+++.|.|. ..+. ..++.+++++.++.+|..
T Consensus 275 ---~ADIVi~atgt~~lI~~e~l~~MK~gailINvgrg 309 (435)
T 3gvp_A 275 ---QVDIVITCTGNKNVVTREHLDRMKNSCIVCNMGHS 309 (435)
T ss_dssp ---TCSEEEECSSCSCSBCHHHHHHSCTTEEEEECSST
T ss_pred ---cCCEEEECCCCcccCCHHHHHhcCCCcEEEEecCC
Confidence 48999999886 4444 788999999999999864
|
| >3asu_A Short-chain dehydrogenase/reductase SDR; SDR family, rossmann-fold, short-chain dehydrogenase/reducta ALLO-threonine dehydrogenase; 1.90A {Escherichia coli} PDB: 3asv_A* | Back alignment and structure |
|---|
Probab=97.92 E-value=0.00011 Score=61.82 Aligned_cols=77 Identities=19% Similarity=0.356 Sum_probs=55.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEEEeC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIYFEN 229 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~vid~ 229 (342)
++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+... +++|+++++
T Consensus 2 ~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~lvnn 81 (248)
T 3asu_A 2 IVLVTGATAGFGECITRRFIQQGHKVIATGRRQERLQELKDELGDNLYIAQLDVRNRAAIEEMLASLPAEWCNIDILVNN 81 (248)
T ss_dssp EEEETTTTSTTHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHTSCTTTCCCCEEEEC
T ss_pred EEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCceEEEEcCCCCHHHHHHHHHHHHHhCCCCCEEEEC
Confidence 6899999999999999988889999999999988777665455532 1 2344444233334443332 369999999
Q ss_pred CC
Q 019332 230 VG 231 (342)
Q Consensus 230 ~g 231 (342)
+|
T Consensus 82 Ag 83 (248)
T 3asu_A 82 AG 83 (248)
T ss_dssp CC
T ss_pred CC
Confidence 87
|
| >1xg5_A ARPG836; short chain dehydrogenase, human, SGC, structural genomics, structural genomics consortium, oxidoreductase; HET: NAP; 1.53A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.92 E-value=6.7e-05 Score=64.34 Aligned_cols=80 Identities=25% Similarity=0.405 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCC-Ce----eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGF-DE----AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~-~~----v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++ .+. .. ..|..+..++.+.+.+.. .+
T Consensus 31 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 110 (279)
T 1xg5_A 31 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQHS 110 (279)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEECChHHHHHHHHHHHhcCCCceEEEEEecCCCHHHHHHHHHHHHHhCC
Confidence 467999999999999999998888999999999998776554322 232 11 134444322333332221 13
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++|+++|
T Consensus 111 ~iD~vi~~Ag 120 (279)
T 1xg5_A 111 GVDICINNAG 120 (279)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999998
|
| >3ucx_A Short chain dehydrogenase; ssgcid, seattle structural genomics center for infectious DI dehydrogenase, oxidoreductase; HET: 1PE; 1.85A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.92 E-value=7.6e-05 Score=63.46 Aligned_cols=81 Identities=14% Similarity=0.223 Sum_probs=56.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHH---HHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLN---EALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~---~~i~~~~~~ 221 (342)
-.+.++||+|+++++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++. +++.+.. +
T Consensus 9 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 87 (264)
T 3ucx_A 9 LTDKVVVISGVGPALGTTLARRCAEQGADLVLAARTVERLEDVAKQVTDTGRRALSVGTDITDDAQVAHLVDETMKAY-G 87 (264)
T ss_dssp TTTCEEEEESCCTTHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-S
T ss_pred cCCcEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 35789999999999999999988889999999999988776554333 332 1 23444442232 2333322 3
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|++++++|.
T Consensus 88 ~id~lv~nAg~ 98 (264)
T 3ucx_A 88 RVDVVINNAFR 98 (264)
T ss_dssp CCSEEEECCCS
T ss_pred CCcEEEECCCC
Confidence 69999999864
|
| >1o54_A SAM-dependent O-methyltransferase; TM0748, structural genomi PSI, protein structure initiative, joint center for structu genomics; 1.65A {Thermotoga maritima} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=97.91 E-value=6.3e-05 Score=64.46 Aligned_cols=102 Identities=20% Similarity=0.310 Sum_probs=70.5
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
....+.++++||-.|+ |. |..++.+++.. +.+|++++.+++..+.+++. .+...-+..... ++.+. ...
T Consensus 106 ~~~~~~~~~~VLDiG~-G~-G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~---~~~ 179 (277)
T 1o54_A 106 MMLDVKEGDRIIDTGV-GS-GAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DISEG---FDE 179 (277)
T ss_dssp HHTTCCTTCEEEEECC-TT-SHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CGGGC---CSC
T ss_pred HHhCCCCCCEEEEECC-cC-CHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHc---ccC
Confidence 4567899999999995 44 88888999885 46999999999887777632 254111222221 22211 122
Q ss_pred CCccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 221 EGIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 ~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+.+|+|+-.... ..+..+.++|+++|+++.+..
T Consensus 180 ~~~D~V~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 214 (277)
T 1o54_A 180 KDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 214 (277)
T ss_dssp CSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred CccCEEEECCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 369998876554 578889999999999987643
|
| >3svt_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 2.00A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=97.91 E-value=7.4e-05 Score=64.17 Aligned_cols=81 Identities=15% Similarity=0.172 Sum_probs=55.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC--ee----EecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD--EA----FNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~--~v----~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. .+ .|..+..++.+.+.+...
T Consensus 10 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (281)
T 3svt_A 10 QDRTYLVTGGGSGIGKGVAAGLVAAGASVMIVGRNPDKLAGAVQELEALGANGGAIRYEPTDITNEDETARAVDAVTAWH 89 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCCSSCEEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhCCCCceEEEEeCCCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999988889999999999988765544333 220 11 244443223333332211
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 90 g~id~lv~nAg~ 101 (281)
T 3svt_A 90 GRLHGVVHCAGG 101 (281)
T ss_dssp SCCCEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 369999999984
|
| >3gem_A Short chain dehydrogenase; structural genomics, APC65077, oxidoreductase, PSI-2, protein structure initiative; 1.83A {Pseudomonas syringae PV} | Back alignment and structure |
|---|
Probab=97.91 E-value=6.8e-05 Score=63.63 Aligned_cols=78 Identities=18% Similarity=0.108 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHcCCCe-eEecCCchhHH---HHHHHHCCCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID-LLKNKFGFDE-AFNYKEEPDLN---EALKRYFPEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~-~~~~~~g~~~-v~~~~~~~~~~---~~i~~~~~~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.. .+. +.++.. ..|..+..++. +.+.+.. +++|++
T Consensus 26 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD~l 103 (260)
T 3gem_A 26 SSAPILITGASQRVGLHCALRLLEHGHRVIISYRTEHASVTELR-QAGAVALYGDFSCETGIMAFIDLLKTQT-SSLRAV 103 (260)
T ss_dssp -CCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESSCCHHHHHHH-HHTCEEEECCTTSHHHHHHHHHHHHHHC-SCCSEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHH-hcCCeEEECCCCCHHHHHHHHHHHHHhc-CCCCEE
Confidence 3578999999999999999988888999999999877643 333 556532 23444442222 2333322 369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 104 v~nAg 108 (260)
T 3gem_A 104 VHNAS 108 (260)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99998
|
| >4gkb_A 3-oxoacyl-[acyl-carrier protein] reductase; putative sugar dehydrogenase, enzyme function initiative, EF structural genomics; 1.50A {Burkholderia multivorans} PDB: 4glo_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=5.4e-05 Score=64.04 Aligned_cols=105 Identities=12% Similarity=0.125 Sum_probs=69.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH--HcCCC-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN--KFGFD-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.|.++||+||++|+|.+.++.+...|++|+++.+++++.+.+.+ +.+.. . ..|-.+..+..+.+.+... |++|
T Consensus 6 ~gKvalVTGas~GIG~aia~~la~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~v~~~~~~~G~iD 85 (258)
T 4gkb_A 6 QDKVVIVTGGASGIGGAISMRLAEERAIPVVFARHAPDGAFLDALAQRQPRATYLPVELQDDAQCRDAVAQTIATFGRLD 85 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCCHHHHHHHHHHCTTCEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCcccHHHHHHHHhcCCCEEEEEeecCCHHHHHHHHHHHHHHhCCCC
Confidence 57899999999999999998888899999999988765443321 33432 1 2344444233222322221 3699
Q ss_pred EEEeCCChh----------h---------------HHHHHHhhh-hCCEEEEEceecc
Q 019332 225 IYFENVGGK----------M---------------LDAVLLNMK-IHGRIAVCGMISQ 256 (342)
Q Consensus 225 ~vid~~g~~----------~---------------~~~~~~~l~-~~G~~v~~g~~~~ 256 (342)
++++++|.. . ...+++.|+ .+|++|.+++...
T Consensus 86 iLVNnAGi~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~IVnisS~~~ 143 (258)
T 4gkb_A 86 GLVNNAGVNDGIGLDAGRDAFVASLERNLIHYYAMAHYCVPHLKATRGAIVNISSKTA 143 (258)
T ss_dssp EEEECCCCCCCCCTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCTHH
T ss_pred EEEECCCCCCCCCccCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCeEEEEeehhh
Confidence 999999831 1 233445554 4799999987654
|
| >2wsb_A Galactitol dehydrogenase; oxidoreductase, SDR, rossmann fold, tagatose; HET: NAD; 1.25A {Rhodobacter sphaeroides} PDB: 2wdz_A* 3lqf_A* | Back alignment and structure |
|---|
Probab=97.90 E-value=8.9e-05 Score=62.48 Aligned_cols=80 Identities=13% Similarity=0.213 Sum_probs=55.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC--e--eEecCCchhHHHHHHHHC-CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD--E--AFNYKEEPDLNEALKRYF-PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~--~--v~~~~~~~~~~~~i~~~~-~~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+...+.+.+.+.. .+++|++
T Consensus 10 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~id~l 89 (254)
T 2wsb_A 10 DGACAAVTGAGSGIGLEICRAFAASGARLILIDREAAALDRAAQELGAAVAARIVADVTDAEAMTAAAAEAEAVAPVSIL 89 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEEECCTTCHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceeEEEEecCCHHHHHHHHHHHHhhCCCcEE
Confidence 4678999999999999999988889999999999988776655355432 1 134444312222222211 1469999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 90 i~~Ag 94 (254)
T 2wsb_A 90 VNSAG 94 (254)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99988
|
| >1zem_A Xylitol dehydrogenase; rossmann fold, dinucleotide-binding domain, oxidoreductase; HET: NAD; 1.90A {Gluconobacter oxydans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00011 Score=62.39 Aligned_cols=80 Identities=15% Similarity=0.271 Sum_probs=54.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ |.. . ..|..+..++.+.+.+... +++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 85 (262)
T 1zem_A 6 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 85 (262)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999999889999999999987766544233 332 1 2344444223222222211 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 86 d~lv~nAg 93 (262)
T 1zem_A 86 DFLFNNAG 93 (262)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999887
|
| >1geg_A Acetoin reductase; SDR family, oxidoreductase; HET: GLC NAD; 1.70A {Klebsiella pneumoniae} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=0.00012 Score=61.87 Aligned_cols=78 Identities=13% Similarity=0.213 Sum_probs=53.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHH---HHCCCCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALK---RYFPEGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~---~~~~~~~ 223 (342)
+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+. +.. +++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~i 80 (256)
T 1geg_A 2 KKVALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGF 80 (256)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCC
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHh-CCC
Confidence 468999999999999999999889999999999987765543232 332 1 234444322333232 222 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 81 d~lv~nAg 88 (256)
T 1geg_A 81 DVIVNNAG 88 (256)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >3o26_A Salutaridine reductase; short chain dehydrogenase/reductases, oxidoreductase; HET: NDP; 1.91A {Papaver somniferum} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.89 E-value=8.5e-05 Score=64.56 Aligned_cols=81 Identities=17% Similarity=0.260 Sum_probs=54.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC--e--eEecCCc-hh---HHHHHHHHC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD--E--AFNYKEE-PD---LNEALKRYF 219 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~--~--v~~~~~~-~~---~~~~i~~~~ 219 (342)
..+.++||+||+|++|.++++.+...|++|++++++.++.+.+.+++ +.. . .+|..+. .. +.+.+.+..
T Consensus 10 ~~~k~vlITGas~GIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~v~~~~~~~~~~~ 89 (311)
T 3o26_A 10 TKRRCAVVTGGNKGIGFEICKQLSSNGIMVVLTCRDVTKGHEAVEKLKNSNHENVVFHQLDVTDPIATMSSLADFIKTHF 89 (311)
T ss_dssp --CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCSEEEEECCTTSCHHHHHHHHHHHHHHH
T ss_pred CCCcEEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCceEEEEccCCCcHHHHHHHHHHHHHhC
Confidence 35689999999999999999888888999999999988765544333 211 1 2344432 12 223333322
Q ss_pred CCCccEEEeCCCh
Q 019332 220 PEGIDIYFENVGG 232 (342)
Q Consensus 220 ~~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 90 -g~iD~lv~nAg~ 101 (311)
T 3o26_A 90 -GKLDILVNNAGV 101 (311)
T ss_dssp -SSCCEEEECCCC
T ss_pred -CCCCEEEECCcc
Confidence 369999999983
|
| >3e8x_A Putative NAD-dependent epimerase/dehydratase; structural genomics, APC7755, NADP, P protein structure initiative; HET: MSE NAP; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.89 E-value=0.0001 Score=61.40 Aligned_cols=99 Identities=18% Similarity=0.177 Sum_probs=67.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.+|||+||+|++|.++++.+...|++|+++++++++.+.+. ..++..++.. |+.+.+.+... ++|++++++|
T Consensus 20 ~~~~ilVtGatG~iG~~l~~~L~~~G~~V~~~~R~~~~~~~~~-~~~~~~~~~~----Dl~~~~~~~~~-~~D~vi~~ag 93 (236)
T 3e8x_A 20 QGMRVLVVGANGKVARYLLSELKNKGHEPVAMVRNEEQGPELR-ERGASDIVVA----NLEEDFSHAFA-SIDAVVFAAG 93 (236)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HTTCSEEEEC----CTTSCCGGGGT-TCSEEEECCC
T ss_pred CCCeEEEECCCChHHHHHHHHHHhCCCeEEEEECChHHHHHHH-hCCCceEEEc----ccHHHHHHHHc-CCCEEEECCC
Confidence 4679999999999999999999889999999999999887776 5565122221 11122333332 6999999998
Q ss_pred hhh--------------HHHHHHhhhh--CCEEEEEceecc
Q 019332 232 GKM--------------LDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 232 ~~~--------------~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
... ...+++.++. .+++|.+++...
T Consensus 94 ~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 134 (236)
T 3e8x_A 94 SGPHTGADKTILIDLWGAIKTIQEAEKRGIKRFIMVSSVGT 134 (236)
T ss_dssp CCTTSCHHHHHHTTTHHHHHHHHHHHHHTCCEEEEECCTTC
T ss_pred CCCCCCccccchhhHHHHHHHHHHHHHcCCCEEEEEecCCC
Confidence 521 1233344433 368998887543
|
| >1uls_A Putative 3-oxoacyl-acyl carrier protein reductase; structural genomics, riken structural genomics/proteomics initiative, RSGI; 2.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.89 E-value=4.7e-05 Score=64.01 Aligned_cols=80 Identities=11% Similarity=0.194 Sum_probs=56.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCC--CCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFP--EGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~--~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++|+.. ..|..+..++.+.+.+... +.+|++++
T Consensus 4 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~lvn 83 (245)
T 1uls_A 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHLGRLDGVVH 83 (245)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHHSSCCEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35789999999999999999988899999999999887776653556421 2344443223333332211 36999999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
++|
T Consensus 84 ~Ag 86 (245)
T 1uls_A 84 YAG 86 (245)
T ss_dssp CCC
T ss_pred CCC
Confidence 998
|
| >2ew8_A (S)-1-phenylethanol dehydrogenase; transferase; 2.10A {Azoarcus SP} SCOP: c.2.1.2 PDB: 2ewm_A* | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00011 Score=61.77 Aligned_cols=79 Identities=13% Similarity=0.189 Sum_probs=54.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHH-HHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKID-LLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~-~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++ ++.+ .++ +.+.. . ..|..+..++.+.+.+.. .+++|
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id 84 (249)
T 2ew8_A 6 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIR-NLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCD 84 (249)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCchhHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHHHHHHcCCCC
Confidence 467899999999999999999888999999999887 5544 333 55542 1 234444312332222221 13699
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++++++|
T Consensus 85 ~lv~nAg 91 (249)
T 2ew8_A 85 ILVNNAG 91 (249)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999988
|
| >1spx_A Short-chain reductase family member (5L265); parallel beta-sheet of seven strands in the order 3214567; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.88 E-value=9.6e-05 Score=63.28 Aligned_cols=81 Identities=15% Similarity=0.294 Sum_probs=55.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC---C-e--eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF---D-E--AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~---~-~--v~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +. . . ..|..+..++.+.+.+...
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~ 84 (278)
T 1spx_A 5 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 84 (278)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcccCCCceeEEecccCCHHHHHHHHHHHHHHc
Confidence 4578999999999999999988888999999999988776654344 21 1 1 1344443123332332211
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 85 g~id~lv~~Ag~ 96 (278)
T 1spx_A 85 GKLDILVNNAGA 96 (278)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEEEECCCC
Confidence 369999999874
|
| >1xhl_A Short-chain dehydrogenase/reductase family member putative tropinone reductase-II...; parallel beta-sheet of seven strands in the order 3214567; HET: NDP TNE; 2.40A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.88 E-value=9.5e-05 Score=64.05 Aligned_cols=80 Identities=20% Similarity=0.346 Sum_probs=54.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC---C-e--eEecCCchhHHHHHHHHC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF---D-E--AFNYKEEPDLNEALKRYF--P 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~---~-~--v~~~~~~~~~~~~i~~~~--~ 220 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +. . . ..|..+..++.+.+.+.. .
T Consensus 25 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 104 (297)
T 1xhl_A 25 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 104 (297)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCCCceEEEEecCCCCHHHHHHHHHHHHHhc
Confidence 4678999999999999999988889999999999987765544232 32 1 1 134444312322232221 1
Q ss_pred CCccEEEeCCC
Q 019332 221 EGIDIYFENVG 231 (342)
Q Consensus 221 ~~~d~vid~~g 231 (342)
+++|++++++|
T Consensus 105 g~iD~lvnnAG 115 (297)
T 1xhl_A 105 GKIDILVNNAG 115 (297)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999988
|
| >3ak4_A NADH-dependent quinuclidinone reductase; SDR, (R)-3-quinuclidinol, chiral alcohol, oxidoreductase; HET: NAD; 2.00A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.88 E-value=0.00015 Score=61.61 Aligned_cols=80 Identities=13% Similarity=0.191 Sum_probs=55.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++... . ..|..+..++.+.+.+.. .+++|++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~iD~l 90 (263)
T 3ak4_A 11 SGRKAIVTGGSKGIGAAIARALDKAGATVAIADLDVMAAQAVVAGLENGGFAVEVDVTKRASVDAAMQKAIDALGGFDLL 90 (263)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCTTCCEEEECCTTCHHHHHHHHHHHHHHHTCCCEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCeEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999999999999999998889999999999988776655344321 1 234444322333232221 1369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 91 v~~Ag 95 (263)
T 3ak4_A 91 CANAG 95 (263)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >1x1t_A D(-)-3-hydroxybutyrate dehydrogenase; NAD, NADH, SDR, short chain dehydrogenase, ketone BODY, beta hydroxybutyrate, oxidoreductase; HET: NAD; 1.52A {Pseudomonas fragi} SCOP: c.2.1.2 PDB: 1wmb_A* 2ztl_A* 2ztv_A* 2ztm_A* 2ztu_A* 2yz7_A 2zea_A* 3eew_A* 3vdq_A* 3vdr_A* | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00014 Score=61.67 Aligned_cols=80 Identities=14% Similarity=0.235 Sum_probs=53.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHc----CCCe-e--EecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNKF----GFDE-A--FNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~~----g~~~-v--~~~~~~~~~~~~i~~~~~--~ 221 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++ .+.+.+++ +... . .|..+..++.+.+.+... +
T Consensus 3 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g 82 (260)
T 1x1t_A 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQMG 82 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCcchHHHHHHHHHHhccCCcEEEEECCCCCHHHHHHHHHHHHHhcC
Confidence 46789999999999999999988899999999988776 54443233 4321 1 244443123333332211 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 83 ~iD~lv~~Ag 92 (260)
T 1x1t_A 83 RIDILVNNAG 92 (260)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999988
|
| >2uvd_A 3-oxoacyl-(acyl-carrier-protein) reductase; beta-ketoacyl- (acyl carrier protein) reductase, short-chain dehydrogenase/reductase (SDR); 2.4A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.87 E-value=0.00011 Score=61.71 Aligned_cols=81 Identities=20% Similarity=0.309 Sum_probs=54.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++ ++++.+.+.++ .+.. . ..|..+..++.+.+.+... ++
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 82 (246)
T 2uvd_A 3 KGKVALVTGASRGIGRAIAIDLAKQGANVVVNYAGNEQKANEVVDEIKKLGSDAIAVRADVANAEDVTNMVKQTVDVFGQ 82 (246)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 3678999999999999999998889999999998 76665544323 2432 1 2344443223333332211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 83 id~lv~nAg~ 92 (246)
T 2uvd_A 83 VDILVNNAGV 92 (246)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >3op4_A 3-oxoacyl-[acyl-carrier protein] reductase; 3-ketoacyl-(acyl-carrier-protein) reductase; HET: MSE NAP; 1.60A {Vibrio cholerae o1 biovar el tor} SCOP: c.2.1.2 PDB: 3rsh_A* 3rro_A* 4i08_A* 3tzk_A 3tzc_A* 3u09_A 3tzh_A 1q7b_A* 1i01_A* 1q7c_A* 2cf2_E | Back alignment and structure |
|---|
Probab=97.86 E-value=4.3e-05 Score=64.41 Aligned_cols=80 Identities=24% Similarity=0.438 Sum_probs=57.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+|+++++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+..++.+.+.+... +++|++
T Consensus 8 ~gk~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 87 (248)
T 3op4_A 8 EGKVALVTGASRGIGKAIAELLAERGAKVIGTATSESGAQAISDYLGDNGKGMALNVTNPESIEAVLKAITDEFGGVDIL 87 (248)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHCCCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcccceEEEEeCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4689999999999999999999899999999999988877665455432 12344544223333332211 369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 88 v~nAg 92 (248)
T 3op4_A 88 VNNAG 92 (248)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99998
|
| >3n74_A 3-ketoacyl-(acyl-carrier-protein) reductase; seattle structural genomics center for infectious disease, S brucellosis; 2.20A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.85 E-value=5.9e-05 Score=63.96 Aligned_cols=80 Identities=21% Similarity=0.298 Sum_probs=57.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+..++.+.+.+... +.+|++
T Consensus 8 ~~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~id~l 87 (261)
T 3n74_A 8 EGKVALITGAGSGFGEGMAKRFAKGGAKVVIVDRDKAGAERVAGEIGDAALAVAADISKEADVDAAVEAALSKFGKVDIL 87 (261)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46799999999999999999988899999999999988877765666431 2344443223333332211 369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 88 i~~Ag 92 (261)
T 3n74_A 88 VNNAG 92 (261)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99988
|
| >3rd5_A Mypaa.01249.C; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: EPE; 1.50A {Mycobacterium paratuberculosis} | Back alignment and structure |
|---|
Probab=97.85 E-value=7.5e-05 Score=64.48 Aligned_cols=79 Identities=15% Similarity=0.209 Sum_probs=57.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.++||+||+|++|.++++.+...|++|++++++.++.+.+.++++.. . ..|..+..++.+.+.+. +++|++++
T Consensus 15 ~gk~vlVTGas~gIG~~~a~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~--~~iD~lv~ 92 (291)
T 3rd5_A 15 AQRTVVITGANSGLGAVTARELARRGATVIMAVRDTRKGEAAARTMAGQVEVRELDLQDLSSVRRFADGV--SGADVLIN 92 (291)
T ss_dssp TTCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHTTSSSEEEEEECCTTCHHHHHHHHHTC--CCEEEEEE
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCeeEEEcCCCCHHHHHHHHHhc--CCCCEEEE
Confidence 5689999999999999999998889999999999998877766455432 1 23444441233333332 46999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 93 nAg~ 96 (291)
T 3rd5_A 93 NAGI 96 (291)
T ss_dssp CCCC
T ss_pred CCcC
Confidence 9983
|
| >4egf_A L-xylulose reductase; structural genomics, ssgcid, seattle structural genomics CEN infectious disease, oxidoreductase; 2.30A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.85 E-value=6.7e-05 Score=63.88 Aligned_cols=79 Identities=23% Similarity=0.379 Sum_probs=55.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----cCCC-e--eEecCCchhHH---HHHHHHCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK----FGFD-E--AFNYKEEPDLN---EALKRYFPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~----~g~~-~--v~~~~~~~~~~---~~i~~~~~~ 221 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.++ .+.. . ..|..+..++. +.+.+.. +
T Consensus 19 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 97 (266)
T 4egf_A 19 DGKRALITGATKGIGADIARAFAAAGARLVLSGRDVSELDAARRALGEQFGTDVHTVAIDLAEPDAPAELARRAAEAF-G 97 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSTTHHHHHHHHHHHHH-T
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHc-C
Confidence 468999999999999999999999999999999998876654423 3432 1 23444431333 3333322 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 98 ~id~lv~nAg 107 (266)
T 4egf_A 98 GLDVLVNNAG 107 (266)
T ss_dssp SCSEEEEECC
T ss_pred CCCEEEECCC
Confidence 6999999988
|
| >3oig_A Enoyl-[acyl-carrier-protein] reductase [NADH]; fatty acid synthesis, rossmann-like fold, enoyl-ACP reductas binding; HET: NAD IMJ; 1.25A {Bacillus subtilis} SCOP: c.2.1.2 PDB: 3oif_A* 2qio_A* 3oje_A 3ojf_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=0.0001 Score=62.73 Aligned_cols=106 Identities=7% Similarity=0.039 Sum_probs=66.8
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC--e--eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD--E--AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~--~--v~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.++||+||+| |+|.+.++.+...|++|+++.++++..+.+.+ +++.. . ..|..+..++.+.+.+...
T Consensus 6 ~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~ 85 (266)
T 3oig_A 6 EGRNIVVMGVANKRSIAWGIARSLHEAGARLIFTYAGERLEKSVHELAGTLDRNDSIILPCDVTNDAEIETCFASIKEQV 85 (266)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHTSSSCCCEEEECCCSSSHHHHHHHHHHHHHH
T ss_pred CCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEecCchHHHHHHHHHHHhcCCCCceEEeCCCCCHHHHHHHHHHHHHHh
Confidence 467999999995 59999988888889999999988754444331 23321 1 2344444233333333221
Q ss_pred CCccEEEeCCCh-h--------------h---------------HHHHHHhhhhCCEEEEEceeccc
Q 019332 221 EGIDIYFENVGG-K--------------M---------------LDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 221 ~~~d~vid~~g~-~--------------~---------------~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
+.+|++++++|. . . ...+.+.++++|+++.+++....
T Consensus 86 g~id~li~~Ag~~~~~~~~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~g~iv~isS~~~~ 152 (266)
T 3oig_A 86 GVIHGIAHCIAFANKEELVGEYLNTNRDGFLLAHNISSYSLTAVVKAARPMMTEGGSIVTLTYLGGE 152 (266)
T ss_dssp SCCCEEEECCCCCCGGGGSSCGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCTTCEEEEEEECGGGT
T ss_pred CCeeEEEEccccccccccccchhhccHHHHHHHHHHhHHHHHHHHHHHHhhcCCCceEEEEeccccc
Confidence 359999999873 1 0 12233445567999999876543
|
| >3l6e_A Oxidoreductase, short-chain dehydrogenase/reducta; structural genomics, PSI-2, protein structure initiative; 2.30A {Aeromonas hydrophila subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.85 E-value=4.3e-05 Score=63.85 Aligned_cols=80 Identities=10% Similarity=0.048 Sum_probs=56.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHC--CCCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+..++.+.+.+.. .+.+|+++
T Consensus 3 ~k~vlVTGas~GIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~lv 82 (235)
T 3l6e_A 3 LGHIIVTGAGSGLGRALTIGLVERGHQVSMMGRRYQRLQQQELLLGNAVIGIVADLAHHEDVDVAFAAAVEWGGLPELVL 82 (235)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTSHHHHHHHHHHHHHHHCSCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhcCCCcEEE
Confidence 568999999999999999888889999999999998877666455432 1234444322332222221 13699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
+++|.
T Consensus 83 nnAg~ 87 (235)
T 3l6e_A 83 HCAGT 87 (235)
T ss_dssp EECCC
T ss_pred ECCCC
Confidence 99884
|
| >1wma_A Carbonyl reductase [NADPH] 1; oxidoreductase; HET: AB3 NDP PE5 P33; 1.24A {Homo sapiens} SCOP: c.2.1.2 PDB: 3bhi_A* 3bhj_A* 3bhm_A* 2pfg_A* 1n5d_A* 2hrb_A* | Back alignment and structure |
|---|
Probab=97.85 E-value=6.3e-05 Score=64.09 Aligned_cols=80 Identities=11% Similarity=0.141 Sum_probs=53.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.++++.+.. .|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+.. .++
T Consensus 3 ~~k~vlITGasggIG~~~a~~L~~~~g~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 82 (276)
T 1wma_A 3 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEYGG 82 (276)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHhcCCeEEEEeCChHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 467999999999999998888877 8999999999887665443233 321 2 234444312332232221 136
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++|+++|
T Consensus 83 id~li~~Ag 91 (276)
T 1wma_A 83 LDVLVNNAG 91 (276)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCc
Confidence 999999987
|
| >2ehd_A Oxidoreductase, oxidoreductase, short-chain dehydrogenase/reducta; rossman fold, structural genomics, NPPSFA; 2.40A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=97.84 E-value=0.00016 Score=60.20 Aligned_cols=79 Identities=19% Similarity=0.194 Sum_probs=54.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.... .|..+..++.+.+.+.. .+++|++++
T Consensus 5 ~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id~li~ 84 (234)
T 2ehd_A 5 KGAVLITGASRGIGEATARLLHAKGYRVGLMARDEKRLQALAAELEGALPLPGDVREEGDWARAVAAMEEAFGELSALVN 84 (234)
T ss_dssp CCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhhceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46899999999999999998888999999999998877666534432122 34444322333232221 136999999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
++|
T Consensus 85 ~Ag 87 (234)
T 2ehd_A 85 NAG 87 (234)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
|
| >4dqx_A Probable oxidoreductase protein; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.84 E-value=6.4e-05 Score=64.46 Aligned_cols=106 Identities=15% Similarity=0.218 Sum_probs=71.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+..++.+.+.+... +++|++
T Consensus 26 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 105 (277)
T 4dqx_A 26 NQRVCIVTGGGSGIGRATAELFAKNGAYVVVADVNEDAAVRVANEIGSKAFGVRVDVSSAKDAESMVEKTTAKWGRVDVL 105 (277)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 46799999999999999999988899999999999888776664665432 2344444223222322211 369999
Q ss_pred EeCCCh-----------hh---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 227 FENVGG-----------KM---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 227 id~~g~-----------~~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
++++|. +. ...+++.++. +|++|.+++....
T Consensus 106 v~nAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~~~g~iv~isS~~~~ 164 (277)
T 4dqx_A 106 VNNAGFGTTGNVVTIPEETWDRIMSVNVKGIFLCSKYVIPVMRRNGGGSIINTTSYTAT 164 (277)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTTCEEEEEECCGGGT
T ss_pred EECCCcCCCCCcccCCHHHHHHHHHHhhHHHHHHHHHHHHHHHHcCCcEEEEECchhhC
Confidence 999983 11 1234444544 5799999876543
|
| >4hp8_A 2-deoxy-D-gluconate 3-dehydrogenase; enzyme function initiative, EFI, structural genomics, oxidor; HET: NAP; 1.35A {Agrobacterium tumefaciens} | Back alignment and structure |
|---|
Probab=97.83 E-value=9.4e-05 Score=61.85 Aligned_cols=101 Identities=21% Similarity=0.298 Sum_probs=67.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh--hHHHHHHHcCCCe---eEecCCchhHHHHHHHHC-CCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KIDLLKNKFGFDE---AFNYKEEPDLNEALKRYF-PEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~--~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~-~~~~d~ 225 (342)
.|.++||+||++|+|.+.++.+...|++|+++.++.. ..+.++ +.|... ..|-.+. . .+++.. .+++|+
T Consensus 8 ~GKvalVTGas~GIG~aiA~~la~~Ga~Vvi~~r~~~~~~~~~~~-~~g~~~~~~~~Dv~d~-~---~v~~~~~~g~iDi 82 (247)
T 4hp8_A 8 EGRKALVTGANTGLGQAIAVGLAAAGAEVVCAARRAPDETLDIIA-KDGGNASALLIDFADP-L---AAKDSFTDAGFDI 82 (247)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHH-HTTCCEEEEECCTTST-T---TTTTSSTTTCCCE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHcCCEEEEEeCCcHHHHHHHHH-HhCCcEEEEEccCCCH-H---HHHHHHHhCCCCE
Confidence 5789999999999999999999999999999998753 334555 566532 2233332 2 222222 247999
Q ss_pred EEeCCChh-----------h---------------HHHHHHhh-hh--CCEEEEEceeccc
Q 019332 226 YFENVGGK-----------M---------------LDAVLLNM-KI--HGRIAVCGMISQY 257 (342)
Q Consensus 226 vid~~g~~-----------~---------------~~~~~~~l-~~--~G~~v~~g~~~~~ 257 (342)
+++++|.. . ...+++.| +. +|++|.+++....
T Consensus 83 LVNNAGi~~~~~~~~~~~~~w~~~~~vNl~g~f~~~~~~~~~m~~~g~~G~IVnisS~~~~ 143 (247)
T 4hp8_A 83 LVNNAGIIRRADSVEFSELDWDEVMDVNLKALFFTTQAFAKELLAKGRSGKVVNIASLLSF 143 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEEECCGGGT
T ss_pred EEECCCCCCCCCcccccHHHHHHHHHHHhHHHHHHHHHHHHHHHHhCCCcEEEEEechhhC
Confidence 99999831 1 12344444 33 5899999886653
|
| >2g1u_A Hypothetical protein TM1088A; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: AMP; 1.50A {Thermotoga maritima} PDB: 3l4b_A* | Back alignment and structure |
|---|
Probab=97.83 E-value=7.7e-05 Score=57.89 Aligned_cols=94 Identities=18% Similarity=0.175 Sum_probs=62.6
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
...++.+|+|.|+ |.+|..+++.++..|.+|+++++++++.+.++++.|.. ++..+.. + .+.+.+....++|+||.
T Consensus 15 ~~~~~~~v~IiG~-G~iG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~g~~-~~~~d~~-~-~~~l~~~~~~~ad~Vi~ 90 (155)
T 2g1u_A 15 KKQKSKYIVIFGC-GRLGSLIANLASSSGHSVVVVDKNEYAFHRLNSEFSGF-TVVGDAA-E-FETLKECGMEKADMVFA 90 (155)
T ss_dssp --CCCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCGGGGGGSCTTCCSE-EEESCTT-S-HHHHHTTTGGGCSEEEE
T ss_pred cccCCCcEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHhcCCCc-EEEecCC-C-HHHHHHcCcccCCEEEE
Confidence 3457789999996 99999999999999999999999988766554134443 3332221 2 22333321226999999
Q ss_pred CCCh-hhHHHHHHhhhh-CC
Q 019332 229 NVGG-KMLDAVLLNMKI-HG 246 (342)
Q Consensus 229 ~~g~-~~~~~~~~~l~~-~G 246 (342)
|++. .....+...++. +|
T Consensus 91 ~~~~~~~~~~~~~~~~~~~~ 110 (155)
T 2g1u_A 91 FTNDDSTNFFISMNARYMFN 110 (155)
T ss_dssp CSSCHHHHHHHHHHHHHTSC
T ss_pred EeCCcHHHHHHHHHHHHHCC
Confidence 9998 444455555555 44
|
| >3v2g_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, protein structure initiati nysgrc; 2.30A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.83 E-value=0.00016 Score=61.74 Aligned_cols=105 Identities=16% Similarity=0.253 Sum_probs=66.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||++++|.+.++.+...|++|++++++. ++.+.+.+ +.+... ..|..+..++.+.+.+... ++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 109 (271)
T 3v2g_A 30 AGKTAFVTGGSRGIGAAIAKRLALEGAAVALTYVNAAERAQAVVSEIEQAGGRAVAIRADNRDAEAIEQAIRETVEALGG 109 (271)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999998888999999886543 44443332 234321 2344443223333332221 36
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 223 IDIYFENVGGK--------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|++++++|.. ....+.+.++.+|++|.+++...
T Consensus 110 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~m~~~g~iv~isS~~~ 169 (271)
T 3v2g_A 110 LDILVNSAGIWHSAPLEETTVADFDEVMAVNFRAPFVAIRSASRHLGDGGRIITIGSNLA 169 (271)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCGGG
T ss_pred CcEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCEEEEEeChhh
Confidence 99999998831 12334455667899999877433
|
| >1zk4_A R-specific alcohol dehydrogenase; short chain reductases/dehydrogenases, magnesium dependence, oxidoreductase; HET: NAP; 1.00A {Lactobacillus brevis} SCOP: c.2.1.2 PDB: 1nxq_A* 1zjy_A* 1zjz_A* 1zk0_A* 1zk1_A* 1zk2_A 1zk3_A | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00018 Score=60.46 Aligned_cols=80 Identities=13% Similarity=0.155 Sum_probs=54.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++.. . . ..|..+...+.+.+.+... +.+|
T Consensus 5 ~~k~vlVtGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 84 (251)
T 1zk4_A 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAFGPVS 84 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSSCC
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhhccCceEEEECCCCCHHHHHHHHHHHHHHhCCCC
Confidence 467899999999999999998888999999999998776655434431 1 1 1344443123322222211 3599
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++++++|
T Consensus 85 ~li~~Ag 91 (251)
T 1zk4_A 85 TLVNNAG 91 (251)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999988
|
| >3rku_A Oxidoreductase YMR226C; substrate fingerprint, short chain oxidoreductase, rossmann oxidoreductase; HET: NAP; 2.60A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.82 E-value=0.00019 Score=61.77 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=55.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC---EEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga---~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~~ 220 (342)
.+.++||+||++++|.+.++.+...|+ +|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+...
T Consensus 32 ~~k~~lVTGas~GIG~aia~~l~~~G~~~~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~ 111 (287)
T 3rku_A 32 AKKTVLITGASAGIGKATALEYLEASNGDMKLILAARRLEKLEELKKTIDQEFPNAKVHVAQLDITQAEKIKPFIENLPQ 111 (287)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHHHHHHHHCTTCEEEEEECCTTCGGGHHHHHHTSCG
T ss_pred CCCEEEEecCCChHHHHHHHHHHHcCCCCceEEEEECCHHHHHHHHHHHHhhCCCCeEEEEECCCCCHHHHHHHHHHHHH
Confidence 467999999999999998877766676 9999999988776655333 321 1 2355554244444444332
Q ss_pred --CCccEEEeCCC
Q 019332 221 --EGIDIYFENVG 231 (342)
Q Consensus 221 --~~~d~vid~~g 231 (342)
+++|++++++|
T Consensus 112 ~~g~iD~lVnnAG 124 (287)
T 3rku_A 112 EFKDIDILVNNAG 124 (287)
T ss_dssp GGCSCCEEEECCC
T ss_pred hcCCCCEEEECCC
Confidence 36999999988
|
| >1hdc_A 3-alpha, 20 beta-hydroxysteroid dehydrogenase; oxidoreductase; HET: CBO; 2.20A {Streptomyces exfoliatus} SCOP: c.2.1.2 PDB: 2hsd_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=5.9e-05 Score=63.78 Aligned_cols=81 Identities=17% Similarity=0.164 Sum_probs=56.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+++... +++|++
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~iD~l 83 (254)
T 1hdc_A 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhCCceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4678999999999999999999889999999999988776655355432 1 2344443233333332221 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 84 v~nAg~ 89 (254)
T 1hdc_A 84 VNNAGI 89 (254)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999883
|
| >3oid_A Enoyl-[acyl-carrier-protein] reductase [NADPH]; fatty acid synthesis, enoyl-ACP reductases, FABL, rossmann-L NADPH binding, oxidoreductase; HET: TCL NDP; 1.80A {Bacillus subtilis} PDB: 3oic_A* | Back alignment and structure |
|---|
Probab=97.81 E-value=0.00014 Score=61.56 Aligned_cols=80 Identities=19% Similarity=0.250 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++ .+++++.+.+.+++ +.. . ..|..+..++.+.+.+.. .++
T Consensus 3 ~~k~vlVTGas~gIG~aia~~l~~~G~~vv~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 82 (258)
T 3oid_A 3 QNKCALVTGSSRGVGKAAAIRLAENGYNIVINYARSKKAALETAEEIEKLGVKVLVVKANVGQPAKIKEMFQQIDETFGR 82 (258)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEecCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999999999999987 77777665544333 332 1 134444322222222221 136
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 83 id~lv~nAg 91 (258)
T 3oid_A 83 LDVFVNNAA 91 (258)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999997
|
| >3zv4_A CIS-2,3-dihydrobiphenyl-2,3-DIOL dehydrogenase; oxidoreductase, short chain dehydrogenase/oxidoreductase, SD comamonas testosteroni; 1.80A {Pandoraea pnomenusa} SCOP: c.2.1.2 PDB: 2y99_A* 3zv3_A 2y93_A 3zv5_A* 3zv6_A* 1bdb_A* | Back alignment and structure |
|---|
Probab=97.80 E-value=7.2e-05 Score=64.28 Aligned_cols=81 Identities=20% Similarity=0.209 Sum_probs=57.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.++++... ..|..+..++.+.+.+.. .+++|++
T Consensus 4 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 83 (281)
T 3zv4_A 4 TGEVALITGGASGLGRALVDRFVAEGARVAVLDKSAERLRELEVAHGGNAVGVVGDVRSLQDQKRAAERCLAAFGKIDTL 83 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTBTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEeCCHHHHHHHHHHcCCcEEEEEcCCCCHHHHHHHHHHHHHhcCCCCEE
Confidence 46799999999999999999998999999999999988777664555421 234444312222222221 1369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 84 vnnAg~ 89 (281)
T 3zv4_A 84 IPNAGI 89 (281)
T ss_dssp ECCCCC
T ss_pred EECCCc
Confidence 999883
|
| >4imr_A 3-oxoacyl-(acyl-carrier-protein) reductase; oxidoreductase, nicotinamide adenine dinucleotide phosphate, structural genomics; HET: NAP; 1.96A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00013 Score=62.34 Aligned_cols=78 Identities=18% Similarity=0.227 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCch---hHHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEP---DLNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~---~~~~~i~~~~~~~ 222 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+.. .+.+.+.+. ++
T Consensus 32 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~--g~ 109 (275)
T 4imr_A 32 RGRTALVTGSSRGIGAAIAEGLAGAGAHVILHGVKPGSTAAVQQRIIASGGTAQELAGDLSEAGAGTDLIERAEAI--AP 109 (275)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSTTTTHHHHHHHHHTTCCEEEEECCTTSTTHHHHHHHHHHHH--SC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCeEEEEEecCCCHHHHHHHHHHHHHh--CC
Confidence 5689999999999999999999889999999999887655544233 332 1 12333331 233344444 56
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 110 iD~lvnnAg 118 (275)
T 4imr_A 110 VDILVINAS 118 (275)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >2ekp_A 2-deoxy-D-gluconate 3-dehydrogenase; structural genomics, NPPSFA, nation project on protein structural and functional analyses; HET: NAD; 1.15A {Thermus thermophilus} PDB: 1x1e_A* 2ekq_A | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00015 Score=60.59 Aligned_cols=75 Identities=12% Similarity=0.234 Sum_probs=52.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCC--CCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFP--EGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~--~~~d~vid~ 229 (342)
+.++||+||+|++|.+.++.+...|++|+++++++++ ..+ +++... ..|..+. +..+.+.+... +++|+++++
T Consensus 2 ~k~vlVTGas~giG~~~a~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~D~~~~-~~~~~~~~~~~~~g~id~lv~~ 77 (239)
T 2ekp_A 2 ERKALVTGGSRGIGRAIAEALVARGYRVAIASRNPEE--AAQ-SLGAVPLPTDLEKD-DPKGLVKRALEALGGLHVLVHA 77 (239)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHH--HHH-HHTCEEEECCTTTS-CHHHHHHHHHHHHTSCCEEEEC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHH--HHH-hhCcEEEecCCchH-HHHHHHHHHHHHcCCCCEEEEC
Confidence 4689999999999999999998899999999998776 333 556421 1233332 33333332211 369999999
Q ss_pred CC
Q 019332 230 VG 231 (342)
Q Consensus 230 ~g 231 (342)
+|
T Consensus 78 Ag 79 (239)
T 2ekp_A 78 AA 79 (239)
T ss_dssp CC
T ss_pred CC
Confidence 88
|
| >3kvo_A Hydroxysteroid dehydrogenase-like protein 2; HSDL2, human hydroxysteroid dehydrogenase like 2, SDHL2, STR genomics, structural genomics consortium; HET: NAP; 2.25A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.80 E-value=0.00016 Score=64.02 Aligned_cols=80 Identities=24% Similarity=0.370 Sum_probs=54.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-----------HHHHHHHcCCCe---eEecCCchhHHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-----------IDLLKNKFGFDE---AFNYKEEPDLNEALKR 217 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-----------~~~~~~~~g~~~---v~~~~~~~~~~~~i~~ 217 (342)
.|.++||+||+++||.+.++.+...|++|+++++++++ .+.++ +.|... ..|..+...+.+.+.+
T Consensus 44 ~gk~vlVTGas~GIG~aia~~La~~Ga~Vvl~~r~~~~~~~l~~~l~~~~~~~~-~~g~~~~~~~~Dv~d~~~v~~~~~~ 122 (346)
T 3kvo_A 44 AGCTVFITGASRGIGKAIALKAAKDGANIVIAAKTAQPHPKLLGTIYTAAEEIE-AVGGKALPCIVDVRDEQQISAAVEK 122 (346)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHH
T ss_pred CCCEEEEeCCChHHHHHHHHHHHHCCCEEEEEECChhhhhhhHHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHHH
Confidence 57899999999999999999888889999999988763 22233 444421 2355554223333332
Q ss_pred HCC--CCccEEEeCCCh
Q 019332 218 YFP--EGIDIYFENVGG 232 (342)
Q Consensus 218 ~~~--~~~d~vid~~g~ 232 (342)
... +++|++++++|.
T Consensus 123 ~~~~~g~iDilVnnAG~ 139 (346)
T 3kvo_A 123 AIKKFGGIDILVNNASA 139 (346)
T ss_dssp HHHHHSCCCEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 221 369999999983
|
| >1yb1_A 17-beta-hydroxysteroid dehydrogenase type XI; short chain dehydrogenase, HUM structural genomics, structural genomics consortium, SGC; HET: AE2; 1.95A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00019 Score=61.26 Aligned_cols=80 Identities=21% Similarity=0.249 Sum_probs=54.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.+.. .+++
T Consensus 30 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~i 109 (272)
T 1yb1_A 30 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 109 (272)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEEcCHHHHHHHHHHHHhcCCeEEEEEeeCCCHHHHHHHHHHHHHHCCCC
Confidence 4679999999999999999998888999999999987765543232 432 1 134444312333332221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 110 D~li~~Ag 117 (272)
T 1yb1_A 110 SILVNNAG 117 (272)
T ss_dssp SEEEECCC
T ss_pred cEEEECCC
Confidence 99999998
|
| >2nwq_A Probable short-chain dehydrogenase; oxidoreductase; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00017 Score=61.57 Aligned_cols=79 Identities=13% Similarity=0.230 Sum_probs=55.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++.. . . ..|..+..++.+.+.+... +.+|++
T Consensus 22 k~vlVTGas~gIG~aia~~La~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~l 101 (272)
T 2nwq_A 22 STLFITGATSGFGEACARRFAEAGWSLVLTGRREERLQALAGELSAKTRVLPLTLDVRDRAAMSAAVDNLPEEFATLRGL 101 (272)
T ss_dssp CEEEESSTTTSSHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHTCCGGGSSCCEE
T ss_pred cEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhcCCcEEEEEcCCCCHHHHHHHHHHHHHHhCCCCEE
Confidence 6899999999999999998888999999999998877665534432 1 1 2344444233333333322 368999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 102 vnnAG~ 107 (272)
T 2nwq_A 102 INNAGL 107 (272)
T ss_dssp EECCCC
T ss_pred EECCCC
Confidence 999874
|
| >3is3_A 17BETA-hydroxysteroid dehydrogenase; short chain dehydrogenase/REDU SDR, fungi, oxidoreductase; HET: GOL; 1.48A {Cochliobolus lunatus} PDB: 3qwf_A* 3qwh_A* 3qwi_A* 3itd_A | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00015 Score=61.84 Aligned_cols=104 Identities=16% Similarity=0.278 Sum_probs=67.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||++++|.+.++.+...|++|+++.++ .++.+.+.+ +.+... ..|..+..++.+.+.+... +.
T Consensus 17 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 96 (270)
T 3is3_A 17 DGKVALVTGSGRGIGAAVAVHLGRLGAKVVVNYANSTKDAEKVVSEIKALGSDAIAIKADIRQVPEIVKLFDQAVAHFGH 96 (270)
T ss_dssp TTCEEEESCTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999998999999987654 443333321 334321 2344443233333332221 36
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhhCCEEEEEceec
Q 019332 223 IDIYFENVGGK--------------------------MLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 223 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|++++++|.. ....+++.++++|++|.+++..
T Consensus 97 id~lvnnAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~isS~~ 155 (270)
T 3is3_A 97 LDIAVSNSGVVSFGHLKDVTEEEFDRVFSLNTRGQFFVAREAYRHLTEGGRIVLTSSNT 155 (270)
T ss_dssp CCEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHCCTTCEEEEECCTT
T ss_pred CCEEEECCCCCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhcCCeEEEEeCch
Confidence 99999998831 1234555667789999998755
|
| >2gn4_A FLAA1 protein, UDP-GLCNAC C6 dehydratase; rossmann fold, TYK triad, SDR, enzyme, NADP, NADPH, lyase; HET: NDP UD1 MES; 1.90A {Helicobacter pylori} PDB: 2gn6_A* 2gn8_A* 2gn9_A* 2gna_A* | Back alignment and structure |
|---|
Probab=97.79 E-value=0.00091 Score=59.11 Aligned_cols=77 Identities=13% Similarity=0.144 Sum_probs=55.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHc-CC-EEEEEeCChhhHHHHHHHcCCC--ee--EecCCchhHHHHHHHHCCCCcc
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLL-GC-YVVGSAGSKDKIDLLKNKFGFD--EA--FNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~-ga-~Vi~~~~s~~~~~~~~~~~g~~--~v--~~~~~~~~~~~~i~~~~~~~~d 224 (342)
-.+.+|||+||+|.+|..+++.+... |+ +|+++++++.+.+.+.+.+... .. .|..+. +.+.+... ++|
T Consensus 19 ~~~k~vlVTGatG~iG~~l~~~L~~~~g~~~V~~~~r~~~~~~~~~~~~~~~~v~~~~~Dl~d~----~~l~~~~~-~~D 93 (344)
T 2gn4_A 19 LDNQTILITGGTGSFGKCFVRKVLDTTNAKKIIVYSRDELKQSEMAMEFNDPRMRFFIGDVRDL----ERLNYALE-GVD 93 (344)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHHCCCSEEEEEESCHHHHHHHHHHHCCTTEEEEECCTTCH----HHHHHHTT-TCS
T ss_pred hCCCEEEEECCCcHHHHHHHHHHHhhCCCCEEEEEECChhhHHHHHHHhcCCCEEEEECCCCCH----HHHHHHHh-cCC
Confidence 34679999999999999988888777 98 9999999988776665344321 11 233332 34444443 599
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
+||.++|.
T Consensus 94 ~Vih~Aa~ 101 (344)
T 2gn4_A 94 ICIHAAAL 101 (344)
T ss_dssp EEEECCCC
T ss_pred EEEECCCC
Confidence 99999984
|
| >3imf_A Short chain dehydrogenase; structural genomics, infectious D center for structural genomics of infectious diseases, oxidoreductase, csgid; HET: MSE; 1.99A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.78 E-value=9e-05 Score=62.73 Aligned_cols=80 Identities=19% Similarity=0.243 Sum_probs=56.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC---C-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF---D-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~---~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++.. . . ..|..+..++.+.+.+.. .+++
T Consensus 5 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 84 (257)
T 3imf_A 5 KEKVVIITGGSSGMGKGMATRFAKEGARVVITGRTKEKLEEAKLEIEQFPGQILTVQMDVRNTDDIQKMIEQIDEKFGRI 84 (257)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCSTTCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 467999999999999999999988999999999999887766544432 1 1 234444322332232221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 85 d~lv~nAg 92 (257)
T 3imf_A 85 DILINNAA 92 (257)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3tfo_A Putative 3-oxoacyl-(acyl-carrier-protein) reducta; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.08A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.78 E-value=8.5e-05 Score=63.19 Aligned_cols=81 Identities=16% Similarity=0.283 Sum_probs=56.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCe---eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDE---AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|..+..++.+.+.+.. .+++
T Consensus 3 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 82 (264)
T 3tfo_A 3 MDKVILITGASGGIGEGIARELGVAGAKILLGARRQARIEAIATEIRDAGGTALAQVLDVTDRHSVAAFAQAAVDTWGRI 82 (264)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999998889999999999988776554333 3321 234444422322222221 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 83 D~lVnnAG~ 91 (264)
T 3tfo_A 83 DVLVNNAGV 91 (264)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >3d3w_A L-xylulose reductase; uronate cycle, short-chain dehydrogenase/reductase(SDR) superfamily, glucose metabolism, acetylation, carbohydrate metabolism; HET: NAP; 1.87A {Homo sapiens} PDB: 1wnt_A* 1pr9_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00028 Score=59.01 Aligned_cols=76 Identities=20% Similarity=0.247 Sum_probs=54.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHCC--CCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFP--EGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~--~~~d~vi 227 (342)
++.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++....+ .|..+. + .+++... +++|+++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~~~id~vi 81 (244)
T 3d3w_A 6 AGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-E---ATERALGSVGPVDLLV 81 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-H---HHHHHHTTCCCCCEEE
T ss_pred CCcEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHcCCCCEEEEeCCCH-H---HHHHHHHHcCCCCEEE
Confidence 467999999999999999999988999999999998877665534432222 344443 2 2333222 3699999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
+++|
T Consensus 82 ~~Ag 85 (244)
T 3d3w_A 82 NNAA 85 (244)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9988
|
| >1gee_A Glucose 1-dehydrogenase; short-chain dehydrogenase/reductase, oxidoreductase; HET: NAD; 1.60A {Bacillus megaterium} SCOP: c.2.1.2 PDB: 1rwb_A* 1gco_A* 1g6k_A* 3aus_A 3aut_A* 3auu_A* | Back alignment and structure |
|---|
Probab=97.77 E-value=0.00024 Score=60.04 Aligned_cols=80 Identities=18% Similarity=0.216 Sum_probs=53.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++ ++++.+.+.++ .+.. . ..|..+..++.+.+.+... ++
T Consensus 6 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (261)
T 1gee_A 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999888888999999998 76655444323 2332 1 1244443123333332211 35
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 86 id~li~~Ag 94 (261)
T 1gee_A 86 LDVMINNAG 94 (261)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >3orf_A Dihydropteridine reductase; alpha-beta-alpha sandwich, rossmann fold, oxidoreductase (AC NADH), NADH binding, oxidoreductase; HET: NAD; 2.16A {Dictyostelium discoideum} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00011 Score=62.00 Aligned_cols=98 Identities=13% Similarity=0.157 Sum_probs=65.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCC--CCccEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP--EGIDIYFENV 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~--~~~d~vid~~ 230 (342)
+.++||+||+|++|.+.++.+...|++|+++++++++.+. ....++..+..++.+.+.+... +.+|++++++
T Consensus 22 ~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~------~~~~~d~~d~~~v~~~~~~~~~~~g~iD~li~~A 95 (251)
T 3orf_A 22 SKNILVLGGSGALGAEVVKFFKSKSWNTISIDFRENPNAD------HSFTIKDSGEEEIKSVIEKINSKSIKVDTFVCAA 95 (251)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCTTSS------EEEECSCSSHHHHHHHHHHHHTTTCCEEEEEECC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------cceEEEeCCHHHHHHHHHHHHHHcCCCCEEEECC
Confidence 5789999999999999999998899999999988765321 1112333333133333443322 3699999999
Q ss_pred Ch--------h----h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 231 GG--------K----M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 231 g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
|. + . ...+.+.++++|++|.+++...
T Consensus 96 g~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 148 (251)
T 3orf_A 96 GGWSGGNASSDEFLKSVKGMIDMNLYSAFASAHIGAKLLNQGGLFVLTGASAA 148 (251)
T ss_dssp CCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred ccCCCCCcccccCHHHHHHHHHHHhHHHHHHHHHHHHhhccCCEEEEEechhh
Confidence 82 1 0 1233445556789999987554
|
| >3d4o_A Dipicolinate synthase subunit A; NP_243269.1, structural GEN joint center for structural genomics, JCSG, protein structu initiative, PSI-2; HET: MSE TAR; 2.10A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00026 Score=61.16 Aligned_cols=92 Identities=21% Similarity=0.285 Sum_probs=71.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|+|+|+ |.+|.++++.++.+|++|++..++.++.+.+. ++|+. .+++. ++.+.+ ...|+|+.++
T Consensus 153 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~-~~~~~---~l~~~l-----~~aDvVi~~~ 221 (293)
T 3d4o_A 153 IHGANVAVLGL-GRVGMSVARKFAALGAKVKVGARESDLLARIA-EMGME-PFHIS---KAAQEL-----RDVDVCINTI 221 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTSE-EEEGG---GHHHHT-----TTCSEEEECC
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHhCCCEEEEEECCHHHHHHHH-HCCCe-ecChh---hHHHHh-----cCCCEEEECC
Confidence 46889999996 99999999999999999999999988877776 77864 33321 333322 2489999998
Q ss_pred Chhh-HHHHHHhhhhCCEEEEEce
Q 019332 231 GGKM-LDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~~~-~~~~~~~l~~~G~~v~~g~ 253 (342)
.... -...++.+++++.+++++.
T Consensus 222 p~~~i~~~~l~~mk~~~~lin~ar 245 (293)
T 3d4o_A 222 PALVVTANVLAEMPSHTFVIDLAS 245 (293)
T ss_dssp SSCCBCHHHHHHSCTTCEEEECSS
T ss_pred ChHHhCHHHHHhcCCCCEEEEecC
Confidence 7632 2456788999999999875
|
| >3pgx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.85A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.76 E-value=0.0002 Score=61.40 Aligned_cols=82 Identities=18% Similarity=0.237 Sum_probs=54.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-------------ChhhHHHHHHH---cCCCe---eEecCCchhH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-------------SKDKIDLLKNK---FGFDE---AFNYKEEPDL 211 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-------------s~~~~~~~~~~---~g~~~---v~~~~~~~~~ 211 (342)
-.+.++||+||++++|.+.++.+...|++|+++++ ++++.+.+.+. .+... ..|..+..++
T Consensus 13 l~gk~~lVTGas~gIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v 92 (280)
T 3pgx_A 13 LQGRVAFITGAARGQGRSHAVRLAAEGADIIACDICAPVSASVTYAPASPEDLDETARLVEDQGRKALTRVLDVRDDAAL 92 (280)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHH
T ss_pred cCCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHH
Confidence 35689999999999999999999899999999987 45555444322 23321 2344444223
Q ss_pred HHHHHHHC--CCCccEEEeCCCh
Q 019332 212 NEALKRYF--PEGIDIYFENVGG 232 (342)
Q Consensus 212 ~~~i~~~~--~~~~d~vid~~g~ 232 (342)
.+.+.+.. .+++|++++++|.
T Consensus 93 ~~~~~~~~~~~g~id~lvnnAg~ 115 (280)
T 3pgx_A 93 RELVADGMEQFGRLDVVVANAGV 115 (280)
T ss_dssp HHHHHHHHHHHCCCCEEEECCCC
T ss_pred HHHHHHHHHHcCCCCEEEECCCC
Confidence 33232221 1369999999883
|
| >3ijr_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, infectious D center for structural genomics of infectious diseases; HET: NAD; 2.05A {Bacillus anthracis str} PDB: 3i3o_A* | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00015 Score=62.60 Aligned_cols=105 Identities=17% Similarity=0.190 Sum_probs=66.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHH---HcCCCe-e--EecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKN---KFGFDE-A--FNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~---~~g~~~-v--~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++ .+.+.+ +.+... . .|..+..++.+.+.+... +.
T Consensus 46 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 125 (291)
T 3ijr_A 46 KGKNVLITGGDSGIGRAVSIAFAKEGANIAIAYLDEEGDANETKQYVEKEGVKCVLLPGDLSDEQHCKDIVQETVRQLGS 125 (291)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHTTTCCEEEEESCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 56899999999999999999998999999999987653 222221 234321 1 244443122222222211 36
Q ss_pred ccEEEeCCChh------------h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 223 IDIYFENVGGK------------M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|++++++|.. . .+.+++.++.+|++|.+++...
T Consensus 126 iD~lvnnAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 186 (291)
T 3ijr_A 126 LNILVNNVAQQYPQQGLEYITAEQLEKTFRINIFSYFHVTKAALSHLKQGDVIINTASIVA 186 (291)
T ss_dssp CCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHHTTCCTTCEEEEECCTHH
T ss_pred CCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHHhhCCEEEEEechHh
Confidence 99999987731 1 1233445566899999887543
|
| >1xq1_A Putative tropinone reducatse; structural genomics, protein structure initiative, CESG, AT1 reductively methylated protein; 2.10A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2q45_A | Back alignment and structure |
|---|
Probab=97.76 E-value=0.00027 Score=59.93 Aligned_cols=81 Identities=16% Similarity=0.351 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHH---HHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLN---EALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~---~~i~~~~~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++.+++++.+.+.+++ +.. . ..|..+...+. +.+.+..+++
T Consensus 13 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 92 (266)
T 1xq1_A 13 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 92 (266)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeeEEEECCCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999999999999999988889999999999887665443232 332 1 12444431222 2222222246
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 93 id~li~~Ag~ 102 (266)
T 1xq1_A 93 LDILINNLGA 102 (266)
T ss_dssp CSEEEEECCC
T ss_pred CcEEEECCCC
Confidence 9999999883
|
| >1vl8_A Gluconate 5-dehydrogenase; TM0441, structural genomics, JCSG structure initiative, PSI, joint center for structural GENO oxidoreductase; HET: NAP; 2.07A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00012 Score=62.39 Aligned_cols=81 Identities=16% Similarity=0.228 Sum_probs=55.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCCe---eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFDE---AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~~---v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +... ..|..+..++.+.+.+.. .++
T Consensus 20 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 99 (267)
T 1vl8_A 20 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 99 (267)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999998889999999999987765543233 5421 234444322333232221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 100 iD~lvnnAg~ 109 (267)
T 1vl8_A 100 LDTVVNAAGI 109 (267)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999883
|
| >3tpc_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, NEW YORK structural genomi research consortium; 2.34A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.74 E-value=5.9e-05 Score=63.86 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=49.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. . ..|..+..++.+.+.+... +++|++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~l 85 (257)
T 3tpc_A 6 KSRVFIVTGASSGLGAAVTRMLAQEGATVLGLDLKPPAGEEPAAELGAAVRFRNADVTNEADATAALAFAKQEFGHVHGL 85 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSCC------------CEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 4679999999999999999999889999999999887766555355432 1 2344443223333322211 369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 86 v~nAg 90 (257)
T 3tpc_A 86 VNCAG 90 (257)
T ss_dssp EECCC
T ss_pred EECCC
Confidence 99988
|
| >2pd6_A Estradiol 17-beta-dehydrogenase 8; short-chain dehydrogenase/reductase, steroid metabolism, LIP metabolism, structural genomics; HET: NAD; 2.00A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.74 E-value=0.00024 Score=60.15 Aligned_cols=80 Identities=13% Similarity=0.074 Sum_probs=53.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---C-------C-Cee--EecCCchhHHHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---G-------F-DEA--FNYKEEPDLNEALKRY 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g-------~-~~v--~~~~~~~~~~~~i~~~ 218 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ + . -.. .|..+...+.+.+++.
T Consensus 6 ~~k~vlITGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~ 85 (264)
T 2pd6_A 6 RSALALVTGAGSGIGRAVSVRLAGEGATVAACDLDRAAAQETVRLLGGPGSKEGPPRGNHAAFQADVSEARAARCLLEQV 85 (264)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHTC------------CCEEEECCTTSHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCccccccCcceEEEEecCCCHHHHHHHHHHH
Confidence 4678999999999999999888888999999999988766554233 1 1 111 2444431233223222
Q ss_pred C--CCCc-cEEEeCCC
Q 019332 219 F--PEGI-DIYFENVG 231 (342)
Q Consensus 219 ~--~~~~-d~vid~~g 231 (342)
. .+.+ |++++++|
T Consensus 86 ~~~~g~i~d~vi~~Ag 101 (264)
T 2pd6_A 86 QACFSRPPSVVVSCAG 101 (264)
T ss_dssp HHHHSSCCSEEEECCC
T ss_pred HHHhCCCCeEEEECCC
Confidence 1 1346 99999988
|
| >1xu9_A Corticosteroid 11-beta-dehydrogenase, isozyme 1; hydroxysteroid, SDR, oxidoreductase; HET: NDP CPS MES; 1.55A {Homo sapiens} SCOP: c.2.1.2 PDB: 1xu7_A* 3bzu_A* 3czr_A* 3d3e_A* 3d4n_A* 3fco_A* 3frj_A* 3h6k_A* 3hfg_A* 3oq1_A* 3qqp_A* 3pdj_A* 3d5q_A* 2rbe_A* 3byz_A* 3ey4_A* 3tfq_A* 3ch6_A* 2irw_A* 2ilt_A* ... | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00032 Score=60.26 Aligned_cols=80 Identities=20% Similarity=0.253 Sum_probs=53.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe--e--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE--A--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~--v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.++++.+...|++|+++++++++.+.+.++ .+... + .|..+...+.+.+.+.. .++
T Consensus 27 ~~k~vlITGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~ 106 (286)
T 1xu9_A 27 QGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDMTFAEQFVAQAGKLMGG 106 (286)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCHHHHHHHHHHHHHHHTS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhCCCceEEEeCCCCCHHHHHHHHHHHHHHcCC
Confidence 467999999999999999998888899999999998876654422 24321 1 34444312222222211 136
Q ss_pred ccEEEeC-CC
Q 019332 223 IDIYFEN-VG 231 (342)
Q Consensus 223 ~d~vid~-~g 231 (342)
+|+++++ .|
T Consensus 107 iD~li~naag 116 (286)
T 1xu9_A 107 LDMLILNHIT 116 (286)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999998 44
|
| >3ppi_A 3-hydroxyacyl-COA dehydrogenase type-2; ssgcid, dehydrogenas mycobacterium avium, structural genomics; 2.00A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.73 E-value=0.00017 Score=61.88 Aligned_cols=78 Identities=18% Similarity=0.170 Sum_probs=57.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHCC-CCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYFP-EGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~~-~~~d~vi 227 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+..++.+.+.+... +++|+++
T Consensus 29 ~~k~vlVTGas~GIG~aia~~l~~~G~~Vi~~~r~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~~id~lv 108 (281)
T 3ppi_A 29 EGASAIVSGGAGGLGEATVRRLHADGLGVVIADLAAEKGKALADELGNRAEFVSTNVTSEDSVLAAIEAANQLGRLRYAV 108 (281)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHTTSSEEEEEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhCCCCeEE
Confidence 4679999999999999999988889999999999998887776566653 1 2344454234444444411 2689999
Q ss_pred eC
Q 019332 228 EN 229 (342)
Q Consensus 228 d~ 229 (342)
++
T Consensus 109 ~~ 110 (281)
T 3ppi_A 109 VA 110 (281)
T ss_dssp EC
T ss_pred Ec
Confidence 88
|
| >2jah_A Clavulanic acid dehydrogenase; short-chain dehydrogenase/reductase, lactamase inhibitor, AN biosynthesis, NADPH, oxidoreductase; HET: MSE NDP; 1.80A {Streptomyces clavuligerus} PDB: 2jap_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00014 Score=61.21 Aligned_cols=80 Identities=23% Similarity=0.383 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+++
T Consensus 6 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~i 85 (247)
T 2jah_A 6 QGKVALITGASSGIGEATARALAAEGAAVAIAARRVEKLRALGDELTAAGAKVHVLELDVADRQGVDAAVASTVEALGGL 85 (247)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999988888999999999988766554333 432 1 234444322332232221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 86 d~lv~nAg 93 (247)
T 2jah_A 86 DILVNNAG 93 (247)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >3n58_A Adenosylhomocysteinase; ssgcid, hydrolase, structural genomics, seattle structural G center for infectious disease; HET: ADN NAD; 2.39A {Brucella melitensis biovar abortus} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00023 Score=63.98 Aligned_cols=94 Identities=19% Similarity=0.130 Sum_probs=72.2
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
...-.|.+|+|.|. |.+|..+++.++.+|++|+++.+++.+...+. ..|.. +. ++.+.++ ..|+++
T Consensus 242 g~~L~GKTVgVIG~-G~IGr~vA~~lrafGa~Viv~d~dp~~a~~A~-~~G~~-vv------~LeElL~-----~ADIVv 307 (464)
T 3n58_A 242 DVMMAGKVAVVCGY-GDVGKGSAQSLAGAGARVKVTEVDPICALQAA-MDGFE-VV------TLDDAAS-----TADIVV 307 (464)
T ss_dssp CCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCE-EC------CHHHHGG-----GCSEEE
T ss_pred CCcccCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCcchhhHHH-hcCce-ec------cHHHHHh-----hCCEEE
Confidence 34568999999996 99999999999999999999998887655555 55653 22 3333332 389999
Q ss_pred eCCChh-hH-HHHHHhhhhCCEEEEEceec
Q 019332 228 ENVGGK-ML-DAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 228 d~~g~~-~~-~~~~~~l~~~G~~v~~g~~~ 255 (342)
.+.|.. .+ ...+..+++++.++++|...
T Consensus 308 ~atgt~~lI~~e~l~~MK~GAILINvGRgd 337 (464)
T 3n58_A 308 TTTGNKDVITIDHMRKMKDMCIVGNIGHFD 337 (464)
T ss_dssp ECCSSSSSBCHHHHHHSCTTEEEEECSSST
T ss_pred ECCCCccccCHHHHhcCCCCeEEEEcCCCC
Confidence 999873 33 58889999999999988643
|
| >3ai3_A NADPH-sorbose reductase; rossmann-fold, NADPH-dependent reductase, short chain dehydrogenase/reductase, oxidoreductase; HET: NAP SOL SOE; 1.80A {Gluconobacter frateurii} PDB: 3ai2_A* 3ai1_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00013 Score=61.87 Aligned_cols=80 Identities=19% Similarity=0.260 Sum_probs=54.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+.. .++
T Consensus 6 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (263)
T 3ai3_A 6 SGKVAVITGSSSGIGLAIAEGFAKEGAHIVLVARQVDRLHEAARSLKEKFGVRVLEVAVDVATPEGVDAVVESVRSSFGG 85 (263)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999998889999999999987765543233 432 1 134444322333232221 136
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 86 id~lv~~Ag 94 (263)
T 3ai3_A 86 ADILVNNAG 94 (263)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >1fmc_A 7 alpha-hydroxysteroid dehydrogenase; short-chain dehydrogenase/reductase, bIle acid catabolism, oxidoreductase; HET: CHO NAD; 1.80A {Escherichia coli} SCOP: c.2.1.2 PDB: 1ahi_A* 1ahh_A* | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00023 Score=59.97 Aligned_cols=81 Identities=22% Similarity=0.326 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.++ .+.. . ..|..+...+.+.+.+.. .+++
T Consensus 10 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 89 (255)
T 1fmc_A 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKLGKV 89 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCccHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHhcCCC
Confidence 467899999999999999998888899999999998766544323 2332 1 134444312222222221 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 90 d~vi~~Ag~ 98 (255)
T 1fmc_A 90 DILVNNAGG 98 (255)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >3pxx_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, NAD, tuberculosis; HET: NAD; 2.00A {Mycobacterium avium} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00024 Score=60.98 Aligned_cols=104 Identities=13% Similarity=0.168 Sum_probs=65.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC------------hhhHHHHHH---HcCCCe---eEecCCchhHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKIDLLKN---KFGFDE---AFNYKEEPDLNE 213 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~ 213 (342)
.+.++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..+... ..|..+..++.+
T Consensus 9 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 88 (287)
T 3pxx_A 9 QDKVVLVTGGARGQGRSHAVKLAEEGADIILFDICHDIETNEYPLATSRDLEEAGLEVEKTGRKAYTAEVDVRDRAAVSR 88 (287)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTSCSCCCCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCeEEEEcccccccccccchhhhHHHHHHHHHHHhcCCceEEEEccCCCHHHHHH
Confidence 46899999999999999999998999999999876 444333321 233321 234444422322
Q ss_pred HHHHHCC--CCccEEEeCCCh---------hhH---------------HHHHHhhhhCCEEEEEceec
Q 019332 214 ALKRYFP--EGIDIYFENVGG---------KML---------------DAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 214 ~i~~~~~--~~~d~vid~~g~---------~~~---------------~~~~~~l~~~G~~v~~g~~~ 255 (342)
.+.+... +++|++++++|. +.+ ..+++.++.+|+++.+++..
T Consensus 89 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~ 156 (287)
T 3pxx_A 89 ELANAVAEFGKLDVVVANAGICPLGAHLPVQAFADAFDVDFVGVINTVHAALPYLTSGASIITTGSVA 156 (287)
T ss_dssp HHHHHHHHHSCCCEEEECCCCCCCCTTCCTHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCHH
T ss_pred HHHHHHHHcCCCCEEEECCCcCcccCcCCHHHHHHHhhhhhhhhHHHHHHHHHHhhcCcEEEEeccch
Confidence 2332221 369999999884 111 22333455678999988743
|
| >3h7a_A Short chain dehydrogenase; oxidoreductase, PSI-2, NYSGXRC, structural genomics, protein structure initiative; 1.87A {Rhodopseudomonas palustris} | Back alignment and structure |
|---|
Probab=97.72 E-value=0.00011 Score=61.98 Aligned_cols=79 Identities=16% Similarity=0.214 Sum_probs=56.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchh---HHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPD---LNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~---~~~~i~~~~~~~ 222 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..+ +.+.+.+. ++
T Consensus 6 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~--g~ 83 (252)
T 3h7a_A 6 RNATVAVIGAGDYIGAEIAKKFAAEGFTVFAGRRNGEKLAPLVAEIEAAGGRIVARSLDARNEDEVTAFLNAADAH--AP 83 (252)
T ss_dssp CSCEEEEECCSSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHH--SC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEECcCCCHHHHHHHHHHHHhh--CC
Confidence 4678999999999999999999889999999999988766554333 332 1 234444312 33344444 56
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 84 id~lv~nAg~ 93 (252)
T 3h7a_A 84 LEVTIFNVGA 93 (252)
T ss_dssp EEEEEECCCC
T ss_pred ceEEEECCCc
Confidence 9999999983
|
| >3edm_A Short chain dehydrogenase; structural genomics, oxidoreductase, PSI-2, P structure initiative; 2.30A {Agrobacterium tumefaciens str} | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00013 Score=61.89 Aligned_cols=80 Identities=13% Similarity=0.135 Sum_probs=51.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||++++|.+.++.+...|++|+++. +++++.+.+.++ .+.. . ..|..+..++.+.+.+... ++
T Consensus 7 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 86 (259)
T 3edm_A 7 TNRTIVVAGAGRDIGRACAIRFAQEGANVVLTYNGAAEGAATAVAEIEKLGRSALAIKADLTNAAEVEAAISAAADKFGE 86 (259)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECSSCHHHHHHHHHHHTTTSCCEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 467999999999999999998888899999884 444443333222 3432 1 2344443122222322211 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 87 id~lv~nAg 95 (259)
T 3edm_A 87 IHGLVHVAG 95 (259)
T ss_dssp EEEEEECCC
T ss_pred CCEEEECCC
Confidence 999999887
|
| >3grk_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, niaid, structural genomics, seattle structural genomics center for infectious disease; 2.35A {Brucella melitensis} PDB: 4eit_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00029 Score=60.89 Aligned_cols=105 Identities=13% Similarity=0.127 Sum_probs=68.0
Q ss_pred CCCCEEEEecCCcH--HHHHHHHHHHHcCCEEEEEeCChhhHHHHH---HHcCCCee--EecCCchhHH---HHHHHHCC
Q 019332 151 KQGECVFISAASGA--VGQLVGQFAKLLGCYVVGSAGSKDKIDLLK---NKFGFDEA--FNYKEEPDLN---EALKRYFP 220 (342)
Q Consensus 151 ~~~~~vlI~ga~g~--vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~---~~~g~~~v--~~~~~~~~~~---~~i~~~~~ 220 (342)
-.+.++||+||+|+ +|.+.++.+...|++|+++.++++..+.++ ++.+.... .|..+..++. +.+.+..
T Consensus 29 l~gk~~lVTGasg~~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 107 (293)
T 3grk_A 29 LQGKRGLILGVANNRSIAWGIAKAAREAGAELAFTYQGDALKKRVEPLAEELGAFVAGHCDVADAASIDAVFETLEKKW- 107 (293)
T ss_dssp TTTCEEEEECCCSSSSHHHHHHHHHHHTTCEEEEEECSHHHHHHHHHHHHHHTCEEEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCEEEEEcCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCceEEECCCCCHHHHHHHHHHHHHhc-
Confidence 35789999999855 999999988889999999998865433332 13343222 3444431222 3333322
Q ss_pred CCccEEEeCCChh------------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 221 EGIDIYFENVGGK------------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 221 ~~~d~vid~~g~~------------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+++|++++++|.. ....+++.++++|++|.+++...
T Consensus 108 g~iD~lVnnAG~~~~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~m~~~g~Iv~isS~~~ 173 (293)
T 3grk_A 108 GKLDFLVHAIGFSDKDELTGRYIDTSEANFTNTMLISVYSLTAVSRRAEKLMADGGSILTLTYYGA 173 (293)
T ss_dssp SCCSEEEECCCCCCHHHHTSCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHTTTCEEEEEEECGGG
T ss_pred CCCCEEEECCccCCcccccccccccCHHHHHHHHHHHHHHHHHHHHHHHHhccCCCEEEEEeehhh
Confidence 3699999998841 01234455667899999987554
|
| >2o23_A HADH2 protein; HSD17B10, schad, ERAB, type II HADH, 2-methyl-3-hydroxybuTyr dehydrogenase, MHBD, structural genomics, structural genomi consortium; HET: NAD GOL; 1.20A {Homo sapiens} SCOP: c.2.1.2 PDB: 1so8_A 1u7t_A* 1e3s_A* 1e3w_B* 1e3w_A* 1e6w_A* | Back alignment and structure |
|---|
Probab=97.71 E-value=0.00012 Score=62.13 Aligned_cols=80 Identities=16% Similarity=0.125 Sum_probs=56.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++.. . ..|..+..++.+.+.+.. .+++|++
T Consensus 11 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id~l 90 (265)
T 2o23_A 11 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNNCVFAPADVTSEKDVQTALALAKGKFGRVDVA 90 (265)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCcHhHHHHHHHhCCceEEEEcCCCCHHHHHHHHHHHHHHCCCCCEE
Confidence 4679999999999999999999889999999999887776655466542 1 234444322333333221 1369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 91 i~~Ag 95 (265)
T 2o23_A 91 VNCAG 95 (265)
T ss_dssp EECCC
T ss_pred EECCc
Confidence 99987
|
| >3nyw_A Putative oxidoreductase; fatty acid synthesis,3-oxoacyl-[ACP] reductase, NADP+ bindin rossman fold, PSI-II, nysgxrc; 2.16A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00012 Score=61.62 Aligned_cols=81 Identities=17% Similarity=0.200 Sum_probs=55.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----C-C-Cee--EecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----G-F-DEA--FNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g-~-~~v--~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ + . ... .|..+..+..+.+.+...
T Consensus 6 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 85 (250)
T 3nyw_A 6 QKGLAIITGASQGIGAVIAAGLATDGYRVVLIARSKQNLEKVHDEIMRSNKHVQEPIVLPLDITDCTKADTEIKDIHQKY 85 (250)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHHTCEEEEEESCHHHHHHHHHHHHHHCTTSCCCEEEECCTTCHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhccccCcceEEeccCCCHHHHHHHHHHHHHhc
Confidence 4678999999999999999888888999999999988776554332 2 1 112 344443222322322211
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 86 g~iD~lvnnAg~ 97 (250)
T 3nyw_A 86 GAVDILVNAAAM 97 (250)
T ss_dssp CCEEEEEECCCC
T ss_pred CCCCEEEECCCc
Confidence 369999999984
|
| >3u5t_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.40A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.0001 Score=62.82 Aligned_cols=104 Identities=15% Similarity=0.202 Sum_probs=64.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||++++|.+.++.+...|++|+++. +++++.+.+.+ ..+... ..|..+..++.+.+.+... ++
T Consensus 26 ~~k~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 105 (267)
T 3u5t_A 26 TNKVAIVTGASRGIGAAIAARLASDGFTVVINYAGKAAAAEEVAGKIEAAGGKALTAQADVSDPAAVRRLFATAEEAFGG 105 (267)
T ss_dssp -CCEEEEESCSSHHHHHHHHHHHHHTCEEEEEESSCSHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 578999999999999999888888899999874 44444443332 234321 2344444222222222211 36
Q ss_pred ccEEEeCCChh-----------h---------------HHHHHHhhhhCCEEEEEceec
Q 019332 223 IDIYFENVGGK-----------M---------------LDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 223 ~d~vid~~g~~-----------~---------------~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|++++++|.. . ...+++.++.+|++|.+++..
T Consensus 106 iD~lvnnAG~~~~~~~~~~~~~~~~~~~~vN~~g~~~~~~~~~~~~~~~g~iv~isS~~ 164 (267)
T 3u5t_A 106 VDVLVNNAGIMPLTTIAETGDAVFDRVIAVNLKGTFNTLREAAQRLRVGGRIINMSTSQ 164 (267)
T ss_dssp EEEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCTH
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHHHHHHHHHHHHHHHHHHhhCCeEEEEeChh
Confidence 99999999831 1 223445556679999988643
|
| >3r1i_A Short-chain type dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; 1.95A {Mycobacterium marinum} | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00013 Score=62.54 Aligned_cols=81 Identities=22% Similarity=0.274 Sum_probs=55.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+... +++
T Consensus 31 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~g~i 110 (276)
T 3r1i_A 31 SGKRALITGASTGIGKKVALAYAEAGAQVAVAARHSDALQVVADEIAGVGGKALPIRCDVTQPDQVRGMLDQMTGELGGI 110 (276)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999988889999999999987766554333 321 1 2344444223333332211 369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 111 D~lvnnAg~ 119 (276)
T 3r1i_A 111 DIAVCNAGI 119 (276)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >2rhc_B Actinorhodin polyketide ketoreductase; oxidoreductase, combinatorial biosynthesis, short chain dehydrogenase/reductase; HET: NAP EMO; 2.10A {Streptomyces coelicolor} SCOP: c.2.1.2 PDB: 2rh4_A* 1w4z_A* 3csd_B* 3qrw_A* 3ri3_B* 2rhr_B* 1x7g_A* 1x7h_A* 1xr3_A* | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00015 Score=62.16 Aligned_cols=79 Identities=14% Similarity=0.334 Sum_probs=54.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHH---HHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALK---RYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~---~~~~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+. +.. ++
T Consensus 21 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~ 99 (277)
T 2rhc_B 21 DSEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GP 99 (277)
T ss_dssp TSCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CS
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHh-CC
Confidence 4678999999999999999998889999999999987765443233 432 1 234444322222222 222 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 100 iD~lv~~Ag 108 (277)
T 2rhc_B 100 VDVLVNNAG 108 (277)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >1yde_A Retinal dehydrogenase/reductase 3; oxidoreductase, structural genomics, structural genomics CON SGC; 2.40A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.70 E-value=0.00015 Score=61.79 Aligned_cols=81 Identities=15% Similarity=0.138 Sum_probs=56.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHC--CCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++..... .|..+..++.+.+.+.. .+++|+++
T Consensus 8 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv 87 (270)
T 1yde_A 8 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 87 (270)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhcCCeEEEcCCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 467999999999999999999988999999999998877666534432122 34444312332232221 13699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
+++|.
T Consensus 88 ~nAg~ 92 (270)
T 1yde_A 88 NNAGH 92 (270)
T ss_dssp ECCCC
T ss_pred ECCCC
Confidence 99873
|
| >3uce_A Dehydrogenase; rossmann fold, oxidoreductase; HET: NDP; 1.80A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.69 E-value=6.9e-05 Score=61.96 Aligned_cols=90 Identities=9% Similarity=0.083 Sum_probs=61.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.++||+||++++|.+.++.+...|++|++++++.+ .|..+...+.+.+++. +++|++++++|
T Consensus 5 ~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~--------------~D~~~~~~v~~~~~~~--g~id~lv~nAg 68 (223)
T 3uce_A 5 DKTVYVVLGGTSGIGAELAKQLESEHTIVHVASRQTG--------------LDISDEKSVYHYFETI--GAFDHLIVTAG 68 (223)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHCSTTEEEEEESGGGT--------------CCTTCHHHHHHHHHHH--CSEEEEEECCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEecCCcc--------------cCCCCHHHHHHHHHHh--CCCCEEEECCC
Confidence 4678999999999999999988888999999987643 2333331333333333 46899999888
Q ss_pred hh------------h---------------HHHHHHhhhhCCEEEEEceeccc
Q 019332 232 GK------------M---------------LDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 232 ~~------------~---------------~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
.. . .+.+.+.++++|+++.+++....
T Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~N~~g~~~~~~~~~~~~~~~g~iv~~sS~~~~ 121 (223)
T 3uce_A 69 SYAPAGKVVDVEVTQAKYAFDTKFWGAVLAAKHGARYLKQGGSITLTSGMLSR 121 (223)
T ss_dssp CCCCCSCTTTSCHHHHHHHHHHHHHHHHHHHHHHGGGEEEEEEEEEECCGGGT
T ss_pred CCCCCCCcccCCHHHHHhhheeeeeeHHHHHHHHHhhccCCeEEEEecchhhc
Confidence 31 0 12233345557899999876543
|
| >3pk0_A Short-chain dehydrogenase/reductase SDR; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.75A {Mycobacterium smegmatis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.69 E-value=9.9e-05 Score=62.69 Aligned_cols=80 Identities=20% Similarity=0.307 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCe----eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDE----AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~----v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|-.+..++.+.+.+... ++
T Consensus 9 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 88 (262)
T 3pk0_A 9 QGRSVVVTGGTKGIGRGIATVFARAGANVAVAGRSTADIDACVADLDQLGSGKVIGVQTDVSDRAQCDALAGRAVEEFGG 88 (262)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTSSSCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHHHHHHHHHHHhCC
Confidence 4689999999999999999998899999999999988766554333 2111 2344443122222222211 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 89 id~lvnnAg 97 (262)
T 3pk0_A 89 IDVVCANAG 97 (262)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3rih_A Short chain dehydrogenase or reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: PG5; 2.15A {Mycobacterium abscessus} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00011 Score=63.55 Aligned_cols=80 Identities=14% Similarity=0.267 Sum_probs=55.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC---Ce----eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF---DE----AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~---~~----v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++.. .. ..|..+..++.+.+.+... ++
T Consensus 40 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 119 (293)
T 3rih_A 40 SARSVLVTGGTKGIGRGIATVFARAGANVAVAARSPRELSSVTAELGELGAGNVIGVRLDVSDPGSCADAARTVVDAFGA 119 (293)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSGGGGHHHHHHHTTSSSSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCcEEEEEEeCCCHHHHHHHHHHHHHHcCC
Confidence 568999999999999999999989999999999998876655534422 11 2344443122222222211 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 120 iD~lvnnAg 128 (293)
T 3rih_A 120 LDVVCANAG 128 (293)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999988
|
| >3k31_A Enoyl-(acyl-carrier-protein) reductase; ssgcid, NIH, niaid, SBRI, UW, decode, eonyl-(acyl-carrier-PR reductase, NAD, oxidoreductase; HET: NAD; 1.80A {Anaplasma phagocytophilum} PDB: 3k2e_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00018 Score=62.21 Aligned_cols=81 Identities=11% Similarity=0.085 Sum_probs=53.9
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhHHHHH---HHcCCCee--EecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK---NKFGFDEA--FNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~---~~~g~~~v--~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+| ++|.+.++.+...|++|++++++++..+.+. ++.+.... .|..+..++.+.+.+... ++
T Consensus 29 ~~k~vlVTGasg~~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 108 (296)
T 3k31_A 29 EGKKGVIIGVANDKSLAWGIAKAVCAQGAEVALTYLSETFKKRVDPLAESLGVKLTVPCDVSDAESVDNMFKVLAEEWGS 108 (296)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHHTCCEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEEeCCCCCCHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 568999999987 9999999988888999999999875444333 13343222 344444223322322211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 109 iD~lVnnAG~ 118 (296)
T 3k31_A 109 LDFVVHAVAF 118 (296)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999984
|
| >2pd4_A Enoyl-[acyl-carrier-protein] reductase [NADH]; antibacterial target, type II fatty acid biosynthesis, enoyl-ACP-reductase, FABI; HET: NAD DCN; 2.30A {Helicobacter pylori} SCOP: c.2.1.2 PDB: 2pd3_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00011 Score=62.96 Aligned_cols=81 Identities=9% Similarity=0.075 Sum_probs=53.4
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHcCCCe--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKFGFDE--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+ |++|.+.++.+...|++|++++++++ ..+.+.++.+... ..|..+...+.+.+.+.. .++
T Consensus 5 ~~k~vlVTGas~~~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 84 (275)
T 2pd4_A 5 KGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDLGS 84 (275)
T ss_dssp TTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHTSC
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEcCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999998 99999999988888999999998875 3344432334212 234444412222222221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 85 id~lv~nAg~ 94 (275)
T 2pd4_A 85 LDFIVHSVAF 94 (275)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999873
|
| >3l77_A Short-chain alcohol dehydrogenase; oxidoreductase; HET: NJP PG4; 1.60A {Thermococcus sibiricus} SCOP: c.2.1.0 PDB: 3tn7_A* | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00035 Score=58.09 Aligned_cols=79 Identities=18% Similarity=0.292 Sum_probs=54.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCCe-e--EecCCchhHHHH---HHHHCCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFDE-A--FNYKEEPDLNEA---LKRYFPEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~~-v--~~~~~~~~~~~~---i~~~~~~~ 222 (342)
+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +... . .|..+..++.+. +.+.. ++
T Consensus 2 ~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g~ 80 (235)
T 3l77_A 2 MKVAVITGASRGIGEAIARALARDGYALALGARSVDRLEKIAHELMQEQGVEVFYHHLDVSKAESVEEFSKKVLERF-GD 80 (235)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHCC-HHHHH-SS
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCeEEEEEeccCCHHHHHHHHHHHHHhc-CC
Confidence 578999999999999999999999999999999988766554332 3321 1 244443122221 22211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 81 id~li~~Ag~ 90 (235)
T 3l77_A 81 VDVVVANAGL 90 (235)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCcc
Confidence 9999999883
|
| >3guy_A Short-chain dehydrogenase/reductase SDR; structural genomics, oxidoreductase, PSI-2, protein structur initiative; 1.90A {Vibrio parahaemolyticus} | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00015 Score=60.10 Aligned_cols=76 Identities=16% Similarity=0.139 Sum_probs=55.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++||+||+|++|.+.++.+...|++|+++++++++.+.+.++++.. ...|..+. +-.+.+-+...+.+|++++++|
T Consensus 3 ~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~D~~~~-~~v~~~~~~~~~~~d~lv~~Ag 81 (230)
T 3guy_A 3 LIVITGASSGLGAELAKLYDAEGKATYLTGRSESKLSTVTNCLSNNVGYRARDLASH-QEVEQLFEQLDSIPSTVVHSAG 81 (230)
T ss_dssp CEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHTCSSCCCEEECCTTCH-HHHHHHHHSCSSCCSEEEECCC
T ss_pred EEEEecCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhccCeEeecCCCH-HHHHHHHHHHhhcCCEEEEeCC
Confidence 6899999999999999999889999999999998887776455432 12344444 3333333323334599999988
|
| >3f1l_A Uncharacterized oxidoreductase YCIK; E. coli, NADP+,; 0.95A {Escherichia coli K12} SCOP: c.2.1.0 PDB: 3f1k_A 3e9q_A* 3f5q_A 3gz4_A* 3f5s_A 3gy0_A* 3iah_A* 3g1t_A | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00016 Score=60.90 Aligned_cols=81 Identities=12% Similarity=0.197 Sum_probs=55.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----C--CC-eeEec--CCchhHH---HHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----G--FD-EAFNY--KEEPDLN---EALKRY 218 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g--~~-~v~~~--~~~~~~~---~~i~~~ 218 (342)
-.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ + .. ...|. .+..+.. +.+.+.
T Consensus 10 l~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~ 89 (252)
T 3f1l_A 10 LNDRIILVTGASDGIGREAAMTYARYGATVILLGRNEEKLRQVASHINEETGRQPQWFILDLLTCTSENCQQLAQRIAVN 89 (252)
T ss_dssp TTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhcCCCceEEEEecccCCHHHHHHHHHHHHHh
Confidence 35789999999999999999988889999999999988766554232 2 11 12333 3331222 223332
Q ss_pred CCCCccEEEeCCCh
Q 019332 219 FPEGIDIYFENVGG 232 (342)
Q Consensus 219 ~~~~~d~vid~~g~ 232 (342)
. +++|++++++|.
T Consensus 90 ~-g~id~lv~nAg~ 102 (252)
T 3f1l_A 90 Y-PRLDGVLHNAGL 102 (252)
T ss_dssp C-SCCSEEEECCCC
T ss_pred C-CCCCEEEECCcc
Confidence 2 369999999883
|
| >3tsc_A Putative oxidoreductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, nucleotide; HET: NAD; 2.05A {Mycobacterium avium subsp} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.69 E-value=0.00024 Score=60.80 Aligned_cols=81 Identities=16% Similarity=0.173 Sum_probs=52.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-------------ChhhHHHHHH---HcCCCe---eEecCCchhHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-------------SKDKIDLLKN---KFGFDE---AFNYKEEPDLN 212 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-------------s~~~~~~~~~---~~g~~~---v~~~~~~~~~~ 212 (342)
.+.++||+||++++|.+.++.+...|++|+++++ +.++.+.+.+ ..+... ..|..+..++.
T Consensus 10 ~~k~~lVTGas~GIG~a~a~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~ 89 (277)
T 3tsc_A 10 EGRVAFITGAARGQGRAHAVRMAAEGADIIAVDIAGKLPSCVPYDPASPDDLSETVRLVEAANRRIVAAVVDTRDFDRLR 89 (277)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHH
T ss_pred CCCEEEEECCccHHHHHHHHHHHHcCCEEEEEeccccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHH
Confidence 4689999999999999999999899999999987 4444443321 223321 23444432233
Q ss_pred HHHHHHCC--CCccEEEeCCCh
Q 019332 213 EALKRYFP--EGIDIYFENVGG 232 (342)
Q Consensus 213 ~~i~~~~~--~~~d~vid~~g~ 232 (342)
+.+.+... +.+|++++++|.
T Consensus 90 ~~~~~~~~~~g~id~lvnnAg~ 111 (277)
T 3tsc_A 90 KVVDDGVAALGRLDIIVANAGV 111 (277)
T ss_dssp HHHHHHHHHHSCCCEEEECCCC
T ss_pred HHHHHHHHHcCCCCEEEECCCC
Confidence 33332211 369999999983
|
| >2q2v_A Beta-D-hydroxybutyrate dehydrogenase; SDR, oxidoreductase; HET: NAD; 1.90A {Pseudomonas putida} PDB: 2q2q_A* 2q2w_A | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00037 Score=58.78 Aligned_cols=79 Identities=15% Similarity=0.277 Sum_probs=51.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH--HcCCC-e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN--KFGFD-E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~--~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++ +...+ +.+.. . ..|..+..++.+.+.+... +++|
T Consensus 3 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~id 81 (255)
T 2q2v_A 3 KGKTALVTGSTSGIGLGIAQVLARAGANIVLNGFGDPA-PALAEIARHGVKAVHHPADLSDVAQIEALFALAEREFGGVD 81 (255)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCH-HHHHHHHTTSCCEEEECCCTTSHHHHHHHHHHHHHHHSSCS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCchH-HHHHHHHhcCCceEEEeCCCCCHHHHHHHHHHHHHHcCCCC
Confidence 35789999999999999999888899999999987652 22220 22432 1 1344443123333322211 3699
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++++++|
T Consensus 82 ~lv~~Ag 88 (255)
T 2q2v_A 82 ILVNNAG 88 (255)
T ss_dssp EEEECCC
T ss_pred EEEECCC
Confidence 9999988
|
| >1zmt_A Haloalcohol dehalogenase HHEC; halohydrin dehalogenase, epoxide catalysis, enantioselectivity, lyase; HET: RNO; 1.70A {Agrobacterium tumefaciens} SCOP: c.2.1.2 PDB: 1pwz_A 1px0_A* 1pwx_A* 1zo8_A* | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00015 Score=61.15 Aligned_cols=78 Identities=15% Similarity=0.052 Sum_probs=52.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH--HcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN--KFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~--~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+ +.+.. ..+|..+-..+.+.+.+.. +++|++++++
T Consensus 2 k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~d~~~v~~~~~~~~~~~-g~iD~lv~nA 80 (254)
T 1zmt_A 2 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELEAFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSND 80 (254)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEEC
T ss_pred eEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhcCCcEEEECHHHHHHHHHHHHHHh-CCCCEEEECC
Confidence 369999999999999999998899999999988876655431 22432 2223322112333333332 3699999988
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
|.
T Consensus 81 g~ 82 (254)
T 1zmt_A 81 IF 82 (254)
T ss_dssp CC
T ss_pred Cc
Confidence 73
|
| >3sju_A Keto reductase; short-chain dehydrogenase, oxidoreductase; HET: NDP; 2.40A {Streptomyces griseoruber} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00015 Score=62.23 Aligned_cols=82 Identities=17% Similarity=0.283 Sum_probs=54.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
..+.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|..+..++.+.+.+... +.
T Consensus 22 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 101 (279)
T 3sju_A 22 SRPQTAFVTGVSSGIGLAVARTLAARGIAVYGCARDAKNVSAAVDGLRAAGHDVDGSSCDVTSTDEVHAAVAAAVERFGP 101 (279)
T ss_dssp ---CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHCS
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35689999999999999999888888999999999988766554333 3321 2344444222222322211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 102 id~lv~nAg~ 111 (279)
T 3sju_A 102 IGILVNSAGR 111 (279)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999999983
|
| >4da9_A Short-chain dehydrogenase/reductase; structural genomics, protein structure initiative, PSI-biology; 2.50A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0004 Score=59.51 Aligned_cols=82 Identities=10% Similarity=0.113 Sum_probs=53.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~ 221 (342)
..+.++||+||+|++|.+.++.+...|++|+++++ ++++.+.+.++ .+.. . ..|..+..++.+.+.+... +
T Consensus 27 ~~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g 106 (280)
T 4da9_A 27 KARPVAIVTGGRRGIGLGIARALAASGFDIAITGIGDAEGVAPVIAELSGLGARVIFLRADLADLSSHQATVDAVVAEFG 106 (280)
T ss_dssp CCCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCHHHHHHHHHHHHHTTCCEEEEECCTTSGGGHHHHHHHHHHHHS
T ss_pred cCCCEEEEecCCCHHHHHHHHHHHHCCCeEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 35689999999999999999999899999999985 55554443322 3332 1 2344444233333332211 3
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|++++++|.
T Consensus 107 ~iD~lvnnAg~ 117 (280)
T 4da9_A 107 RIDCLVNNAGI 117 (280)
T ss_dssp CCCEEEEECC-
T ss_pred CCCEEEECCCc
Confidence 69999999884
|
| >3sx2_A Putative 3-ketoacyl-(acyl-carrier-protein) reduct; ssgcid, 3-ketoacyl-(acyl-carrier-protein) reductase, mycobac paratuberculosis; HET: NAD; 1.50A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.68 E-value=0.00039 Score=59.47 Aligned_cols=105 Identities=15% Similarity=0.198 Sum_probs=66.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC------------hhhHHHHHH---HcCCCe---eEecCCchhHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKIDLLKN---KFGFDE---AFNYKEEPDLNE 213 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~ 213 (342)
.+.++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..+... ..|..+..++.+
T Consensus 12 ~gk~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~ 91 (278)
T 3sx2_A 12 TGKVAFITGAARGQGRAHAVRLAADGADIIAVDLCDQIASVPYPLATPEELAATVKLVEDIGSRIVARQADVRDRESLSA 91 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEecccccccccccccchHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 56899999999999999999988999999999876 444433321 234321 234444422333
Q ss_pred HHHHHCC--CCccEEEeCCChh-------h---------------HHHHHHhhhh---CCEEEEEceecc
Q 019332 214 ALKRYFP--EGIDIYFENVGGK-------M---------------LDAVLLNMKI---HGRIAVCGMISQ 256 (342)
Q Consensus 214 ~i~~~~~--~~~d~vid~~g~~-------~---------------~~~~~~~l~~---~G~~v~~g~~~~ 256 (342)
.+.+... +++|++++++|.. . ...+++.+.. +|++|.+++...
T Consensus 92 ~~~~~~~~~g~id~lv~nAg~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~g~iv~isS~~~ 161 (278)
T 3sx2_A 92 ALQAGLDELGRLDIVVANAGIAPMSAGDDGWHDVIDVNLTGVYHTIKVAIPTLVKQGTGGSIVLISSSAG 161 (278)
T ss_dssp HHHHHHHHHCCCCEEEECCCCCCCSSTHHHHHHHHHHHTHHHHHHHHHHHHHHHHHCSCEEEEEECCGGG
T ss_pred HHHHHHHHcCCCCEEEECCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhCCCCcEEEEEccHHh
Confidence 3332211 3699999999831 1 1223344433 689999987654
|
| >3lyl_A 3-oxoacyl-(acyl-carrier-protein) reductase; alpha and beta protein, NAD(P)-binding rossmann fold, csgid, oxidoreductase; 1.95A {Francisella tularensis subsp} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.68 E-value=0.0002 Score=60.09 Aligned_cols=81 Identities=23% Similarity=0.345 Sum_probs=56.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+++
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 83 (247)
T 3lyl_A 4 NEKVALVTGASRGIGFEVAHALASKGATVVGTATSQASAEKFENSMKEKGFKARGLVLNISDIESIQNFFAEIKAENLAI 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHTTCCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 3678999999999999999988888999999999988766554332 432 1 234444423333333322 2369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 84 d~li~~Ag~ 92 (247)
T 3lyl_A 84 DILVNNAGI 92 (247)
T ss_dssp SEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999983
|
| >2ph3_A 3-oxoacyl-[acyl carrier protein] reductase; TTHA0415, structural genomics, southea collaboratory for structural genomics, secsg; 1.91A {Thermus thermophilus HB8} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00023 Score=59.52 Aligned_cols=78 Identities=18% Similarity=0.193 Sum_probs=51.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHH---cCCC-ee---EecCCchhHHHHHHHHC--CCCc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNK---FGFD-EA---FNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~---~g~~-~v---~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.++||+||+|++|.+.++.+...|++|+++ .+++++.+.+.++ .+.. .. .|..+...+.+.+.+.. .+++
T Consensus 2 k~vlITGasggiG~~~a~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~~ 81 (245)
T 2ph3_A 2 RKALITGASRGIGRAIALRLAEDGFALAIHYGQNREKAEEVAEEARRRGSPLVAVLGANLLEAEAATALVHQAAEVLGGL 81 (245)
T ss_dssp CEEEETTTTSHHHHHHHHHHHTTTCEEEEEESSCHHHHHHHHHHHHHTTCSCEEEEECCTTSHHHHHHHHHHHHHHHTCC
T ss_pred CEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCceEEEEeccCCCHHHHHHHHHHHHHhcCCC
Confidence 579999999999999999888899999998 7777766544322 2332 11 24444312222222221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 82 d~li~~Ag 89 (245)
T 2ph3_A 82 DTLVNNAG 89 (245)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >3qiv_A Short-chain dehydrogenase or 3-oxoacyl-[acyl-CARR protein] reductase; structural genomics; 2.25A {Mycobacterium avium subsp} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00017 Score=60.78 Aligned_cols=80 Identities=16% Similarity=0.209 Sum_probs=55.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHH---HHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNE---ALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~---~i~~~~~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+ .+.+.. ++
T Consensus 8 ~~k~vlITGas~giG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~-g~ 86 (253)
T 3qiv_A 8 ENKVGIVTGSGGGIGQAYAEALAREGAAVVVADINAEAAEAVAKQIVADGGTAISVAVDVSDPESAKAMADRTLAEF-GG 86 (253)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHH-SC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 4679999999999999999999889999999999988776654333 321 1 234444312222 222222 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 87 id~li~~Ag~ 96 (253)
T 3qiv_A 87 IDYLVNNAAI 96 (253)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999874
|
| >3v8b_A Putative dehydrogenase, possibly 3-oxoacyl-[acyl- protein] reductase; PSI-biology, structural genomics, protein structure initiati nysgrc; 2.70A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00017 Score=62.01 Aligned_cols=81 Identities=14% Similarity=0.179 Sum_probs=56.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC---CC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG---FD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g---~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++. .. . ..|..+..++.+.+.+.. .+++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (283)
T 3v8b_A 27 PSPVALITGAGSGIGRATALALAADGVTVGALGRTRTEVEEVADEIVGAGGQAIALEADVSDELQMRNAVRDLVLKFGHL 106 (283)
T ss_dssp CCCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHTTTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 46799999999999999999888899999999999887766654442 21 1 234444322222233221 1369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 107 D~lVnnAg~ 115 (283)
T 3v8b_A 107 DIVVANAGI 115 (283)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >2c07_A 3-oxoacyl-(acyl-carrier protein) reductase; oxidoreductase, FABG, short-chain alcohol reductase, fatty acid biosynthesis, apicoplast; 1.5A {Plasmodium falciparum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00026 Score=60.84 Aligned_cols=81 Identities=14% Similarity=0.335 Sum_probs=54.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++.+++++.+.+.+++ +.. . ..|..+...+.+.+.+.. .+++
T Consensus 43 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~d~~~v~~~~~~~~~~~~~i 122 (285)
T 2c07_A 43 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEHKNV 122 (285)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHCSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHcCCEEEEEcCCHHHHHHHHHHHHhcCCceeEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 3578999999999999999888888999999888877665443233 432 1 134444323333333221 2369
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++|+++|.
T Consensus 123 d~li~~Ag~ 131 (285)
T 2c07_A 123 DILVNNAGI 131 (285)
T ss_dssp CEEEECCCC
T ss_pred CEEEECCCC
Confidence 999999883
|
| >2x9g_A PTR1, pteridine reductase; short chain dehydrogenase, oxidoreductase; HET: NAP LYA; 1.10A {Trypanosoma brucei brucei} PDB: 2x9n_A* 2x9v_A* 3bmc_A* 3bmd_A* 3bme_A* 3bmf_A* 3bmg_A* 3bmh_A* 3bmi_A* 3bmj_A* 3bmk_A* 3bml_A* 3bmm_A* 3bmn_A* 3bmo_A* 3bmq_A* 3bmr_A* 3gn1_A* 3gn2_A* 3jq6_A* ... | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00017 Score=62.08 Aligned_cols=81 Identities=12% Similarity=0.164 Sum_probs=53.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHHHc----CCC-e--eEecCC----chhHHHHHHHHC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKNKF----GFD-E--AFNYKE----EPDLNEALKRYF 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~~~----g~~-~--v~~~~~----~~~~~~~i~~~~ 219 (342)
.+.++||+||+|++|.+.++.+...|++|++++++. ++.+.+.+++ +.. . ..|..+ ..++.+.+.+..
T Consensus 22 ~~k~~lVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~~Dv~~~~~~~~~v~~~~~~~~ 101 (288)
T 2x9g_A 22 EAPAAVVTGAAKRIGRAIAVKLHQTGYRVVIHYHNSAEAAVSLADELNKERSNTAVVCQADLTNSNVLPASCEEIINSCF 101 (288)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHHTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSCSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhhcCCceEEEEeecCCccCCHHHHHHHHHHHH
Confidence 467899999999999999998888899999999987 6655443232 321 1 134444 312222222221
Q ss_pred --CCCccEEEeCCCh
Q 019332 220 --PEGIDIYFENVGG 232 (342)
Q Consensus 220 --~~~~d~vid~~g~ 232 (342)
.+++|++++++|.
T Consensus 102 ~~~g~iD~lvnnAG~ 116 (288)
T 2x9g_A 102 RAFGRCDVLVNNASA 116 (288)
T ss_dssp HHHSCCCEEEECCCC
T ss_pred HhcCCCCEEEECCCC
Confidence 1369999999883
|
| >1ae1_A Tropinone reductase-I; oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to tropine, short-chain dehydrogenase; HET: NAP; 2.40A {Datura stramonium} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.67 E-value=0.00022 Score=60.88 Aligned_cols=81 Identities=16% Similarity=0.293 Sum_probs=56.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhH---HHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDL---NEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~---~~~i~~~~~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++ .+.+.+...++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 99 (273)
T 1ae1_A 20 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 99 (273)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEECCcchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999999889999999999987765443232 432 1 2344443122 23333333357
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 100 id~lv~nAg~ 109 (273)
T 1ae1_A 100 LNILVNNAGV 109 (273)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCCC
Confidence 9999999883
|
| >3ftp_A 3-oxoacyl-[acyl-carrier protein] reductase; ssgcid, 3-ketoacyl-(acyl-carrier- protein) reductase, oxidoreductase, structural genomics; 2.05A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=97.66 E-value=0.00016 Score=61.71 Aligned_cols=80 Identities=14% Similarity=0.326 Sum_probs=55.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC---eeEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD---EAFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++.+.+.++ .+.. ...|..+..++.+.+.+... +++
T Consensus 27 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 106 (270)
T 3ftp_A 27 DKQVAIVTGASRGIGRAIALELARRGAMVIGTATTEAGAEGIGAAFKQAGLEGRGAVLNVNDATAVDALVESTLKEFGAL 106 (270)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEEeCCCHHHHHHHHHHHHHHcCCC
Confidence 568999999999999999998888899999999998776554422 2332 12344444222222322211 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 107 D~lvnnAg 114 (270)
T 3ftp_A 107 NVLVNNAG 114 (270)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3ksu_A 3-oxoacyl-acyl carrier protein reductase; structural genomics, PSI-2, dehydrogenase, protein structure initiative; 2.30A {Oenococcus oeni psu-1} | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00017 Score=61.30 Aligned_cols=80 Identities=16% Similarity=0.223 Sum_probs=51.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.++||+||++++|.+.++.+...|++|+++.++.. +.+.+.+++ +.. . ..|..+..++.+.+.+...
T Consensus 10 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~ 89 (262)
T 3ksu_A 10 KNKVIVIAGGIKNLGALTAKTFALESVNLVLHYHQAKDSDTANKLKDELEDQGAKVALYQSDLSNEEEVAKLFDFAEKEF 89 (262)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHTTSSCEEEEEESCGGGHHHHHHHHHHHHTTTCEEEEEECCCCSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEecCccCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHc
Confidence 4679999999999999999999889999999876543 333332232 332 1 2344443122222222211
Q ss_pred CCccEEEeCCC
Q 019332 221 EGIDIYFENVG 231 (342)
Q Consensus 221 ~~~d~vid~~g 231 (342)
+++|++++++|
T Consensus 90 g~iD~lvnnAg 100 (262)
T 3ksu_A 90 GKVDIAINTVG 100 (262)
T ss_dssp CSEEEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999998
|
| >2ae2_A Protein (tropinone reductase-II); oxidoreductase, tropane alkaloid biosynthesis, reduction of tropinone to pseudotropine; HET: NAP PTO; 1.90A {Datura stramonium} SCOP: c.2.1.2 PDB: 2ae1_A* 1ipe_A* 1ipf_A* | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00022 Score=60.41 Aligned_cols=80 Identities=16% Similarity=0.320 Sum_probs=55.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHH---HHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLN---EALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~---~~i~~~~~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++. +.+.+..+++
T Consensus 8 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g~ 87 (260)
T 2ae2_A 8 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 87 (260)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999988889999999999987765443232 332 1 13444431222 3333333256
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 88 id~lv~~Ag 96 (260)
T 2ae2_A 88 LNILVNNAG 96 (260)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >1cyd_A Carbonyl reductase; short-chain dehydrogenase, oxidoreductase; HET: NAP; 1.80A {Mus musculus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.65 E-value=0.00035 Score=58.39 Aligned_cols=76 Identities=16% Similarity=0.259 Sum_probs=54.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-CCCe-eEecCCchhHHHHHHHHCC--CCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-GFDE-AFNYKEEPDLNEALKRYFP--EGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-g~~~-v~~~~~~~~~~~~i~~~~~--~~~d~vi 227 (342)
++.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++. +... ..|..+. + .+++... +.+|+++
T Consensus 6 ~~~~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~~~~~id~vi 81 (244)
T 1cyd_A 6 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-D---ATEKALGGIGPVDLLV 81 (244)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-H---HHHHHHTTCCCCSEEE
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHhccCCCcEEecCCCH-H---HHHHHHHHcCCCCEEE
Confidence 4678999999999999999999889999999999988776555233 2221 2344443 2 2333222 3689999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
+++|
T Consensus 82 ~~Ag 85 (244)
T 1cyd_A 82 NNAA 85 (244)
T ss_dssp ECCC
T ss_pred ECCc
Confidence 9998
|
| >1o5i_A 3-oxoacyl-(acyl carrier protein) reductase; TM1169, structur genomics, JCSG, PSI, protein structure initiative, joint CE structural genomics; HET: NAD; 2.50A {Thermotoga maritima} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00058 Score=57.40 Aligned_cols=73 Identities=25% Similarity=0.318 Sum_probs=51.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
..+.++||+||+|++|.+.++.+...|++|++++++++. ++ +++.... .|. .. +....+.+.. ++|+++++
T Consensus 17 ~~~k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~---~~-~~~~~~~~~D~-~~-~~~~~~~~~~--~iD~lv~~ 88 (249)
T 1o5i_A 17 IRDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEEL---LK-RSGHRYVVCDL-RK-DLDLLFEKVK--EVDILVLN 88 (249)
T ss_dssp CTTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHH---HH-HTCSEEEECCT-TT-CHHHHHHHSC--CCSEEEEC
T ss_pred cCCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCHHH---HH-hhCCeEEEeeH-HH-HHHHHHHHhc--CCCEEEEC
Confidence 457899999999999999999888899999999988743 33 4442222 233 21 3333333332 59999999
Q ss_pred CC
Q 019332 230 VG 231 (342)
Q Consensus 230 ~g 231 (342)
+|
T Consensus 89 Ag 90 (249)
T 1o5i_A 89 AG 90 (249)
T ss_dssp CC
T ss_pred CC
Confidence 98
|
| >2rir_A Dipicolinate synthase, A chain; structural genomics, APC1343, PSI-2, structure initiative; HET: MSE NAP; 2.79A {Bacillus subtilis} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00024 Score=61.62 Aligned_cols=92 Identities=23% Similarity=0.303 Sum_probs=70.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.+.+|+|+|+ |.+|.++++.++.+|++|++..++.++.+.+. ++|.. ++++. ++.+. . ...|+|+.++
T Consensus 155 l~g~~v~IiG~-G~iG~~~a~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~-~~~~~---~l~~~----l-~~aDvVi~~~ 223 (300)
T 2rir_A 155 IHGSQVAVLGL-GRTGMTIARTFAALGANVKVGARSSAHLARIT-EMGLV-PFHTD---ELKEH----V-KDIDICINTI 223 (300)
T ss_dssp STTSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCE-EEEGG---GHHHH----S-TTCSEEEECC
T ss_pred CCCCEEEEEcc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HCCCe-EEchh---hHHHH----h-hCCCEEEECC
Confidence 46889999996 99999999999999999999999988877776 67763 33321 33322 2 2489999999
Q ss_pred ChhhH-HHHHHhhhhCCEEEEEce
Q 019332 231 GGKML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~~~~-~~~~~~l~~~G~~v~~g~ 253 (342)
....+ ...++.+++++.+++++.
T Consensus 224 p~~~i~~~~~~~mk~g~~lin~a~ 247 (300)
T 2rir_A 224 PSMILNQTVLSSMTPKTLILDLAS 247 (300)
T ss_dssp SSCCBCHHHHTTSCTTCEEEECSS
T ss_pred ChhhhCHHHHHhCCCCCEEEEEeC
Confidence 86332 456778999999999876
|
| >1zmo_A Halohydrin dehalogenase; haloalcohol dehalogenase, short- chain dehydrogenase/reductase family, lyase; 2.00A {Arthrobacter SP} | Back alignment and structure |
|---|
Probab=97.64 E-value=0.00015 Score=60.76 Aligned_cols=78 Identities=18% Similarity=0.046 Sum_probs=55.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-e--CChhhHHHHHHHc-CCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-A--GSKDKIDLLKNKF-GFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~--~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
+.++||+||+|++|.+.++.+...|++|+++ . +++++.+.+.+++ +. .+.+...-..+.+.+.+.. +++|++++
T Consensus 1 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~~~~r~~~~~~~~~~~~~~~-~~~~~~~v~~~~~~~~~~~-g~iD~lv~ 78 (244)
T 1zmo_A 1 MVIALVTHARHFAGPAAVEALTQDGYTVVCHDASFADAAERQRFESENPGT-IALAEQKPERLVDATLQHG-EAIDTIVS 78 (244)
T ss_dssp -CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHHHHHHHSTTE-EECCCCCGGGHHHHHGGGS-SCEEEEEE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEecCCcCCHHHHHHHHHHhCCC-cccCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 3589999999999999999998899999999 6 8888777665455 32 2333333223444444433 36999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 79 ~Ag~ 82 (244)
T 1zmo_A 79 NDYI 82 (244)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9873
|
| >3tox_A Short chain dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, oxidoreductase; HET: NAP; 1.93A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00012 Score=62.75 Aligned_cols=80 Identities=20% Similarity=0.268 Sum_probs=55.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC---CC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG---FD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g---~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++. .. . ..|..+...+...+.+.. .+++
T Consensus 7 ~gk~vlVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 86 (280)
T 3tox_A 7 EGKIAIVTGASSGIGRAAALLFAREGAKVVVTARNGNALAELTDEIAGGGGEAAALAGDVGDEALHEALVELAVRRFGGL 86 (280)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHTTTTCCEEECCCCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 46799999999999999999988899999999999887766654442 21 1 124444312222222221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 87 D~lvnnAg 94 (280)
T 3tox_A 87 DTAFNNAG 94 (280)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999988
|
| >3t4x_A Oxidoreductase, short chain dehydrogenase/reducta; structural genomics, center for structural genomics of infec diseases, csgid; 2.80A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00035 Score=59.38 Aligned_cols=78 Identities=12% Similarity=0.252 Sum_probs=54.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+. +..+.+.+.. +++
T Consensus 9 ~~k~~lVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~D~~~~-~~~~~~~~~~-g~i 86 (267)
T 3t4x_A 9 KGKTALVTGSTAGIGKAIATSLVAEGANVLINGRREENVNETIKEIRAQYPDAILQPVVADLGTE-QGCQDVIEKY-PKV 86 (267)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHCTTCEEEEEECCTTSH-HHHHHHHHHC-CCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhCCCceEEEEecCCCCH-HHHHHHHHhc-CCC
Confidence 4679999999999999999988889999999999987765443232 121 1 2244444 3333333332 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 87 d~lv~nAg 94 (267)
T 3t4x_A 87 DILINNLG 94 (267)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3h2s_A Putative NADH-flavin reductase; Q03B84, NESG, LCR19, structural genomics, PSI-2, protein structure initiative; HET: NDP; 1.78A {Lactobacillus casei atcc 334} | Back alignment and structure |
|---|
Probab=97.63 E-value=0.00031 Score=57.78 Aligned_cols=92 Identities=9% Similarity=-0.040 Sum_probs=63.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|||+||+|.+|..+++.+...|.+|+++++++++.+.+. ..+... ..|..+. +. ..+ +++|+||+++|..
T Consensus 2 kilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~-~~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~ 73 (224)
T 3h2s_A 2 KIAVLGATGRAGSAIVAEARRRGHEVLAVVRDPQKAADRL-GATVATLVKEPLVL-TE----ADL--DSVDAVVDALSVP 73 (224)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHT-CTTSEEEECCGGGC-CH----HHH--TTCSEEEECCCCC
T ss_pred EEEEEcCCCHHHHHHHHHHHHCCCEEEEEEeccccccccc-CCCceEEecccccc-cH----hhc--ccCCEEEECCccC
Confidence 5999999999999999999888999999999988766543 334322 2244433 22 222 3599999999852
Q ss_pred -----------hHHHHHHhhhh-CCEEEEEcee
Q 019332 234 -----------MLDAVLLNMKI-HGRIAVCGMI 254 (342)
Q Consensus 234 -----------~~~~~~~~l~~-~G~~v~~g~~ 254 (342)
....+++.++. +++++.+++.
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 106 (224)
T 3h2s_A 74 WGSGRGYLHLDFATHLVSLLRNSDTLAVFILGS 106 (224)
T ss_dssp TTSSCTHHHHHHHHHHHHTCTTCCCEEEEECCG
T ss_pred CCcchhhHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 22344555544 4788888754
|
| >4fc7_A Peroxisomal 2,4-dienoyl-COA reductase; SDR/rossmann fold, peroxisomal beta-oxidation, oxidoreductas; HET: NAP COA; 1.84A {Homo sapiens} PDB: 4fc6_A* | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00019 Score=61.42 Aligned_cols=81 Identities=17% Similarity=0.286 Sum_probs=55.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-e--eEecCCchhHHHHHHHHCC--C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-E--AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~i~~~~~--~ 221 (342)
-.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+... +
T Consensus 25 l~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 104 (277)
T 4fc7_A 25 LRDKVAFITGGGSGIGFRIAEIFMRHGCHTVIASRSLPRVLTAARKLAGATGRRCLPLSMDVRAPPAVMAAVDQALKEFG 104 (277)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHHcC
Confidence 35789999999999999999999889999999999987655443232 432 1 1344444223223332211 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 105 ~id~lv~nAg 114 (277)
T 4fc7_A 105 RIDILINCAA 114 (277)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCc
Confidence 6999999998
|
| >3gaf_A 7-alpha-hydroxysteroid dehydrogenase; seattle structural genomics center for infectious disease, ssgcid, oxidoreductase, structural genomics; 2.20A {Brucella melitensis} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00012 Score=61.84 Aligned_cols=106 Identities=15% Similarity=0.188 Sum_probs=68.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+... +++
T Consensus 11 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~i 90 (256)
T 3gaf_A 11 NDAVAIVTGAAAGIGRAIAGTFAKAGASVVVTDLKSEGAEAVAAAIRQAGGKAIGLECNVTDEQHREAVIKAALDQFGKI 90 (256)
T ss_dssp TTCEEEECSCSSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999998888888999999999988766554332 332 1 2344443122222222211 369
Q ss_pred cEEEeCCCh----------hh---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 224 DIYFENVGG----------KM---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 224 d~vid~~g~----------~~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
|++++++|. +. .+.+++.++. +|++|.+++....
T Consensus 91 d~lv~nAg~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 151 (256)
T 3gaf_A 91 TVLVNNAGGGGPKPFDMPMSDFEWAFKLNLFSLFRLSQLAAPHMQKAGGGAILNISSMAGE 151 (256)
T ss_dssp CEEEECCCCCCCCCTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCGGGT
T ss_pred CEEEECCCCCCCCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHHHhcCCcEEEEEcCHHHc
Confidence 999999883 11 1223344433 5799999876553
|
| >2hq1_A Glucose/ribitol dehydrogenase; CTH-1438, structural genomics, southeast collaboratory for structural genomics, secsg, PSI; 1.90A {Clostridium thermocellum} | Back alignment and structure |
|---|
Probab=97.62 E-value=0.0004 Score=58.16 Aligned_cols=81 Identities=19% Similarity=0.281 Sum_probs=50.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+|++|++|.+.++.+...|++|+++ .+++++.+.+.++ .+.. . ..|..+...+.+.+.+.. .++
T Consensus 4 ~~~~vlItGasggiG~~~a~~l~~~G~~V~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 83 (247)
T 2hq1_A 4 KGKTAIVTGSSRGLGKAIAWKLGNMGANIVLNGSPASTSLDATAEEFKAAGINVVVAKGDVKNPEDVENMVKTAMDAFGR 83 (247)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECTTCSHHHHHHHHHHHTTCCEEEEESCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCcEEEEECCCchHHHHHHHHHHHCCCEEEEEcCcCHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 35789999999999999999988899999998 5555544433212 3432 1 134444312333332221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 84 ~d~vi~~Ag~ 93 (247)
T 2hq1_A 84 IDILVNNAGI 93 (247)
T ss_dssp CCEEEECC--
T ss_pred CCEEEECCCC
Confidence 9999999884
|
| >1edo_A Beta-keto acyl carrier protein reductase; nucleotide fold, rossmann fold, oxidoreductase; HET: NAP; 2.30A {Brassica napus} SCOP: c.2.1.2 PDB: 2cdh_G | Back alignment and structure |
|---|
Probab=97.62 E-value=0.00041 Score=57.96 Aligned_cols=79 Identities=22% Similarity=0.316 Sum_probs=52.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
|.++||+||+|++|.+.++.+...|++|+++ .+++++.+.+.++ .+.. . ..|..+..++.+.+.+.. .+++
T Consensus 1 ~k~vlVTGasggiG~~la~~l~~~G~~v~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 80 (244)
T 1edo_A 1 SPVVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAWGTI 80 (244)
T ss_dssp CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHSSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHHHHHHhcCCcEEEEeCCCCCHHHHHHHHHHHHHHcCCC
Confidence 4689999999999999999998899999985 7777665544322 2431 1 134444322333333221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 81 d~li~~Ag 88 (244)
T 1edo_A 81 DVVVNNAG 88 (244)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >1xkq_A Short-chain reductase family member (5D234); parrallel beta-sheet of seven strands in the order 3214567; HET: NDP; 2.10A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00015 Score=62.26 Aligned_cols=80 Identities=16% Similarity=0.304 Sum_probs=54.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC---C-e--eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF---D-E--AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~---~-~--v~~~~~~~~~~~~i~~~~~-- 220 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +. . . ..|..+..++.+.+.+...
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 84 (280)
T 1xkq_A 5 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 84 (280)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCCCcceEEEEecCCCHHHHHHHHHHHHHhc
Confidence 4678999999999999999988889999999999988766554233 22 1 1 1344444222222322211
Q ss_pred CCccEEEeCCC
Q 019332 221 EGIDIYFENVG 231 (342)
Q Consensus 221 ~~~d~vid~~g 231 (342)
+++|++++++|
T Consensus 85 g~iD~lv~nAg 95 (280)
T 1xkq_A 85 GKIDVLVNNAG 95 (280)
T ss_dssp SCCCEEEECCC
T ss_pred CCCCEEEECCC
Confidence 36999999987
|
| >2h7i_A Enoyl-[acyl-carrier-protein] reductase [NADH]; oxidoreductase, INHA, enoyl acyl carrier reductase, pyrrolid carboxamide; HET: NAD 566; 1.62A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1p44_A* 1p45_A* 2b35_A* 2b36_A* 2b37_A* 2aq8_A* 2h7l_A* 2h7m_A* 2h7n_A* 2h7p_A* 2nsd_A* 2pr2_A* 2x22_A* 2x23_A* 3fne_A* 3fnf_A* 3fng_A* 3fnh_A* 3oew_A* 2aqh_A* ... | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00014 Score=61.97 Aligned_cols=81 Identities=12% Similarity=0.225 Sum_probs=54.5
Q ss_pred CCCEEEEecC--CcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHcCCC-e--eEecCCchhHH---HHHHHHCC--
Q 019332 152 QGECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNKFGFD-E--AFNYKEEPDLN---EALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga--~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~~g~~-~--v~~~~~~~~~~---~~i~~~~~-- 220 (342)
.+.++||+|+ +|++|.+.++.+...|++|+++++++++ .+.+.++++.. . ..|..+..++. +.+.+..+
T Consensus 6 ~~k~vlVTGa~~s~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~~ 85 (269)
T 2h7i_A 6 DGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIGAG 85 (269)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHCTT
T ss_pred CCCEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecChHHHHHHHHHhcCCCceEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 4678999998 8999999999988899999999988765 34444344432 1 23444441222 23333222
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 86 ~~iD~lv~nAg~ 97 (269)
T 2h7i_A 86 NKLDGVVHSIGF 97 (269)
T ss_dssp CCEEEEEECCCC
T ss_pred CCceEEEECCcc
Confidence 169999999873
|
| >3ond_A Adenosylhomocysteinase; plant protein, enzyme-substrate complex, NAD cofactor, regul SAM-dependent methylation reactions; HET: NAD ADN; 1.17A {Lupinus luteus} PDB: 3one_A* 3onf_A* | Back alignment and structure |
|---|
Probab=97.61 E-value=6.2e-05 Score=68.78 Aligned_cols=90 Identities=17% Similarity=0.192 Sum_probs=69.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+++|+|+ |++|.+.++.++..|++|+++.+++.+...+. ..|++ +.+.. + . ...+|+++++.
T Consensus 263 L~GKtVvVtGa-GgIG~aiA~~Laa~GA~Viv~D~~~~~a~~Aa-~~g~d-v~~le---e-------~-~~~aDvVi~at 328 (488)
T 3ond_A 263 IAGKVAVVAGY-GDVGKGCAAALKQAGARVIVTEIDPICALQAT-MEGLQ-VLTLE---D-------V-VSEADIFVTTT 328 (488)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCE-ECCGG---G-------T-TTTCSEEEECS
T ss_pred ccCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEcCCHHHHHHHH-HhCCc-cCCHH---H-------H-HHhcCEEEeCC
Confidence 57899999997 79999999999999999999999988877766 66652 22111 1 1 12489999999
Q ss_pred Ch-hhH-HHHHHhhhhCCEEEEEcee
Q 019332 231 GG-KML-DAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 231 g~-~~~-~~~~~~l~~~G~~v~~g~~ 254 (342)
|. ..+ ...++.+++++.++..|..
T Consensus 329 G~~~vl~~e~l~~mk~gaiVvNaG~~ 354 (488)
T 3ond_A 329 GNKDIIMLDHMKKMKNNAIVCNIGHF 354 (488)
T ss_dssp SCSCSBCHHHHTTSCTTEEEEESSST
T ss_pred CChhhhhHHHHHhcCCCeEEEEcCCC
Confidence 97 444 4478889999999998863
|
| >2b4q_A Rhamnolipids biosynthesis 3-oxoacyl-[acyl- carrier-protein] reductase; RHLG-NADP complex, oxidoreductase; HET: NAP; 2.30A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.61 E-value=0.00016 Score=61.90 Aligned_cols=79 Identities=19% Similarity=0.256 Sum_probs=54.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-e--eEecCCchhHHHH---HHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-E--AFNYKEEPDLNEA---LKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~---i~~~~~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++.. . . ..|..+..++.+. +.+.. +++
T Consensus 28 ~~k~vlVTGas~gIG~aia~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~i 106 (276)
T 2b4q_A 28 AGRIALVTGGSRGIGQMIAQGLLEAGARVFICARDAEACADTATRLSAYGDCQAIPADLSSEAGARRLAQALGELS-ARL 106 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHTTSSCEEECCCCTTSHHHHHHHHHHHHHHC-SCC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCceEEEEeeCCCHHHHHHHHHHHHHhc-CCC
Confidence 467899999999999999999888999999999998776655434421 1 1 1244443122222 22222 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 107 D~lvnnAg 114 (276)
T 2b4q_A 107 DILVNNAG 114 (276)
T ss_dssp SEEEECCC
T ss_pred CEEEECCC
Confidence 99999998
|
| >3lf2_A Short chain oxidoreductase Q9HYA2; SDR, SCOR, rossmann fold; HET: NAP; 2.30A {Pseudomonas aeruginosa} PDB: 3lf1_A* | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00018 Score=61.16 Aligned_cols=81 Identities=11% Similarity=0.081 Sum_probs=55.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----cCCC--e--eEecCCchhHHHHHHHHC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK----FGFD--E--AFNYKEEPDLNEALKRYF--PE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~----~g~~--~--v~~~~~~~~~~~~i~~~~--~~ 221 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++.+.+.++ .+.. . ..|..+..+..+.+.+.. .+
T Consensus 7 ~~k~~lVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g 86 (265)
T 3lf2_A 7 SEAVAVVTGGSSGIGLATVELLLEAGAAVAFCARDGERLRAAESALRQRFPGARLFASVCDVLDALQVRAFAEACERTLG 86 (265)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSTTCCEEEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCCHHHHHHHHHHHHHHcC
Confidence 467999999999999999999888999999999998876655433 2222 1 134444412222222221 13
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 87 ~id~lvnnAg~ 97 (265)
T 3lf2_A 87 CASILVNNAGQ 97 (265)
T ss_dssp SCSEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 69999999983
|
| >3ew7_A LMO0794 protein; Q8Y8U8_lismo, putative NAD-dependent epimerase/dehydratase, LMR162, NESG, structural genomics, PSI-2; 2.73A {Listeria monocytogenes} | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00027 Score=57.97 Aligned_cols=92 Identities=18% Similarity=0.138 Sum_probs=63.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|||+||+|.+|..+++.+...|.+|+++++++++.+.+. .+... ..|..+. +. +.+ +++|+||+++|..
T Consensus 2 kvlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~--~~~~~~~~D~~d~-~~----~~~--~~~d~vi~~ag~~ 72 (221)
T 3ew7_A 2 KIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTH--KDINILQKDIFDL-TL----SDL--SDQNVVVDAYGIS 72 (221)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCSHHHHHHC--SSSEEEECCGGGC-CH----HHH--TTCSEEEECCCSS
T ss_pred eEEEEcCCchhHHHHHHHHHhCCCEEEEEEcCchhhhhcc--CCCeEEeccccCh-hh----hhh--cCCCEEEECCcCC
Confidence 6999999999999999999999999999999987765432 23321 2233333 22 222 3599999999852
Q ss_pred ---------hHHHHHHhhhhC--CEEEEEceec
Q 019332 234 ---------MLDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 234 ---------~~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
....+++.++.. ++++.+++..
T Consensus 73 ~~~~~~~~~~~~~l~~a~~~~~~~~~v~~SS~~ 105 (221)
T 3ew7_A 73 PDEAEKHVTSLDHLISVLNGTVSPRLLVVGGAA 105 (221)
T ss_dssp TTTTTSHHHHHHHHHHHHCSCCSSEEEEECCCC
T ss_pred ccccchHHHHHHHHHHHHHhcCCceEEEEecce
Confidence 234566666554 6888887643
|
| >2d1y_A Hypothetical protein TT0321; strucrtural genomics, thermus thermophilus HB8, structural genomics, NPPSFA; HET: NAD; 1.65A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.60 E-value=0.00019 Score=60.67 Aligned_cols=78 Identities=13% Similarity=0.181 Sum_probs=53.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHC--CCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYF--PEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~--~~~~d~vi 227 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++ +.+.++++. .. .|..+..++.+.+.+.. .+++|+++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~-~~~~~~~~~-~~~~~D~~~~~~~~~~~~~~~~~~g~iD~lv 82 (256)
T 2d1y_A 5 AGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEG-KEVAEAIGG-AFFQVDLEDERERVRFVEEAAYALGRVDVLV 82 (256)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTH-HHHHHHHTC-EEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhH-HHHHHHhhC-CEEEeeCCCHHHHHHHHHHHHHHcCCCCEEE
Confidence 46789999999999999999888899999999998877 444325532 22 34444312333333221 13699999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
+++|
T Consensus 83 ~~Ag 86 (256)
T 2d1y_A 83 NNAA 86 (256)
T ss_dssp ECCC
T ss_pred ECCC
Confidence 9988
|
| >3ctm_A Carbonyl reductase; alcohol dehydrogenase, short-chain dehydrogenases/reductases (SDR), X-RAY crystallography, oxidoreductase; 2.69A {Candida parapsilosis} | Back alignment and structure |
|---|
Probab=97.59 E-value=0.00035 Score=59.71 Aligned_cols=81 Identities=20% Similarity=0.296 Sum_probs=53.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.+.++||+||+|++|.+.+..+...|++|++++++.++.+.+.+ +.+.. .. .|..+..++.+.+.+... +.+
T Consensus 33 ~~k~vlITGasggIG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~i 112 (279)
T 3ctm_A 33 KGKVASVTGSSGGIGWAVAEAYAQAGADVAIWYNSHPADEKAEHLQKTYGVHSKAYKCNISDPKSVEETISQQEKDFGTI 112 (279)
T ss_dssp TTCEEEETTTTSSHHHHHHHHHHHHTCEEEEEESSSCCHHHHHHHHHHHCSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCcceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 46799999999999999888888889999999988765544331 23432 11 344443123333332211 359
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 113 d~li~~Ag~ 121 (279)
T 3ctm_A 113 DVFVANAGV 121 (279)
T ss_dssp SEEEECGGG
T ss_pred CEEEECCcc
Confidence 999999873
|
| >1ooe_A Dihydropteridine reductase; structural genomics, PSI, protein structure initiative, southeast collaboratory for structural genomics; HET: MES; 1.65A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.59 E-value=3.5e-05 Score=64.37 Aligned_cols=98 Identities=19% Similarity=0.170 Sum_probs=62.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchh---HHHHHHHHCC-CCccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPD---LNEALKRYFP-EGIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~---~~~~i~~~~~-~~~d~v 226 (342)
+.++||+||+|++|.+.++.+...|++|+++++++++.+ +.... .|..+..+ +.+.+.+..+ +++|++
T Consensus 3 ~k~vlITGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~------~~~~~~~~D~~~~~~~~~~~~~~~~~~~~g~id~l 76 (236)
T 1ooe_A 3 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQA------DSNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 76 (236)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTS------SEEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEEecCccccc------cccEEEeCCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 568999999999999999999889999999998876521 10011 12222212 2223333332 479999
Q ss_pred EeCCCh--------h----h---------------HHHHHHhhhhCCEEEEEceecc
Q 019332 227 FENVGG--------K----M---------------LDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 227 id~~g~--------~----~---------------~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++++|. + . ...+.+.++++|+++.+++...
T Consensus 77 v~~Ag~~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~g~iv~isS~~~ 133 (236)
T 1ooe_A 77 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAA 133 (236)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred EECCcccCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhccCCEEEEECchhh
Confidence 999982 1 1 1223344445789999887554
|
| >2zat_A Dehydrogenase/reductase SDR family member 4; alpha/beta, oxidoreductase; HET: NAP; 1.50A {Sus scrofa} PDB: 3o4r_A* | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00025 Score=60.02 Aligned_cols=80 Identities=16% Similarity=0.280 Sum_probs=54.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+++
T Consensus 13 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~i 92 (260)
T 2zat_A 13 ENKVALVTASTDGIGLAIARRLAQDGAHVVVSSRKQENVDRTVATLQGEGLSVTGTVCHVGKAEDRERLVAMAVNLHGGV 92 (260)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEccCCCHHHHHHHHHHHHHHcCCC
Confidence 4679999999999999999988889999999999987665443232 332 1 234444312222222221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 93 D~lv~~Ag 100 (260)
T 2zat_A 93 DILVSNAA 100 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >3r3s_A Oxidoreductase; structural genomics, csgid, center for structural genomics O infectious diseases, 3-layer(ABA) sandwich, rossmann fold; HET: NAD; 1.25A {Salmonella enterica subsp} | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00038 Score=60.14 Aligned_cols=105 Identities=12% Similarity=0.122 Sum_probs=66.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh--hHHHHHH---HcCCCe---eEecCCchhH---HHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KIDLLKN---KFGFDE---AFNYKEEPDL---NEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~--~~~~~~~---~~g~~~---v~~~~~~~~~---~~~i~~~~~ 220 (342)
.+.++||+||++++|.+.++.+...|++|+++.++.+ +.+.+.+ +.+... ..|..+..++ .+.+.+..
T Consensus 48 ~~k~vlVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 126 (294)
T 3r3s_A 48 KDRKALVTGGDSGIGRAAAIAYAREGADVAINYLPAEEEDAQQVKALIEECGRKAVLLPGDLSDESFARSLVHKAREAL- 126 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCGGGHHHHHHHHHHHHHTTCCEEECCCCTTSHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchhHHHHHHHHHHHcCCcEEEEEecCCCHHHHHHHHHHHHHHc-
Confidence 5689999999999999999999899999999987632 2222221 334321 1244443122 22232222
Q ss_pred CCccEEEeCCCh-h-----------h---------------HHHHHHhhhhCCEEEEEceeccc
Q 019332 221 EGIDIYFENVGG-K-----------M---------------LDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 221 ~~~d~vid~~g~-~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
+++|++++++|. . . .+.+++.++++|++|.+++....
T Consensus 127 g~iD~lv~nAg~~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~~~~~~~~g~Iv~isS~~~~ 190 (294)
T 3r3s_A 127 GGLDILALVAGKQTAIPEIKDLTSEQFQQTFAVNVFALFWITQEAIPLLPKGASIITTSSIQAY 190 (294)
T ss_dssp TCCCEEEECCCCCCCCSSGGGCCHHHHHHHHHHHTHHHHHHHHHHGGGCCTTCEEEEECCGGGT
T ss_pred CCCCEEEECCCCcCCCCCcccCCHHHHHHHHHHHhHHHHHHHHHHHHHhhcCCEEEEECChhhc
Confidence 369999999883 1 0 12233455668999999876553
|
| >3i1j_A Oxidoreductase, short chain dehydrogenase/reducta; dimer, MIXE beta, structural genomics, PSI-2; 1.90A {Pseudomonas syringae PV} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.58 E-value=0.00056 Score=57.26 Aligned_cols=81 Identities=14% Similarity=0.214 Sum_probs=55.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC--CeeE--ec--CCchhHH---HHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF--DEAF--NY--KEEPDLN---EALKRY 218 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~--~~v~--~~--~~~~~~~---~~i~~~ 218 (342)
-.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +. ..++ +. .+..++. +.+.+.
T Consensus 12 l~~k~vlITGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~d~~~~~~~~~~~~~~~~~ 91 (247)
T 3i1j_A 12 LKGRVILVTGAARGIGAAAARAYAAHGASVVLLGRTEASLAEVSDQIKSAGQPQPLIIALNLENATAQQYRELAARVEHE 91 (247)
T ss_dssp TTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTSCCCEEEECCTTTCCHHHHHHHHHHHHHH
T ss_pred CCCCEEEEeCCCChHHHHHHHHHHHCCCEEEEEecCHHHHHHHHHHHHhcCCCCceEEEeccccCCHHHHHHHHHHHHHh
Confidence 35789999999999999999999889999999999988776554332 21 1222 22 2221222 223222
Q ss_pred CCCCccEEEeCCCh
Q 019332 219 FPEGIDIYFENVGG 232 (342)
Q Consensus 219 ~~~~~d~vid~~g~ 232 (342)
. +++|++++++|.
T Consensus 92 ~-g~id~lv~nAg~ 104 (247)
T 3i1j_A 92 F-GRLDGLLHNASI 104 (247)
T ss_dssp H-SCCSEEEECCCC
T ss_pred C-CCCCEEEECCcc
Confidence 2 369999999883
|
| >1uzm_A 3-oxoacyl-[acyl-carrier protein] reductase; beta-ketoacyl reductase, oxidoreductase; 1.49A {Mycobacterium tuberculosis} SCOP: c.2.1.2 PDB: 1uzn_A* 2ntn_A 1uzl_A | Back alignment and structure |
|---|
Probab=97.58 E-value=9.5e-05 Score=62.17 Aligned_cols=76 Identities=13% Similarity=0.157 Sum_probs=51.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC--CCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF--PEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~--~~~~d~vid~ 229 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+. + ...|..+..++.+.+.+.. .+++|+++++
T Consensus 14 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~---~--~~~D~~~~~~~~~~~~~~~~~~g~id~lv~~ 88 (247)
T 1uzm_A 14 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF---G--VEVDVTDSDAVDRAFTAVEEHQGPVEVLVSN 88 (247)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE---E--EECCTTCHHHHHHHHHHHHHHHSSCSEEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHhc---C--eeccCCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 4678999999999999999988889999999998776533211 1 2244444412322222221 1369999999
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
+|.
T Consensus 89 Ag~ 91 (247)
T 1uzm_A 89 AGL 91 (247)
T ss_dssp CSC
T ss_pred CCC
Confidence 884
|
| >3awd_A GOX2181, putative polyol dehydrogenase; oxidoreductase; 1.80A {Gluconobacter oxydans} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00029 Score=59.50 Aligned_cols=80 Identities=11% Similarity=0.184 Sum_probs=54.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+++.. .+++
T Consensus 12 ~~k~vlItGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 91 (260)
T 3awd_A 12 DNRVAIVTGGAQNIGLACVTALAEAGARVIIADLDEAMATKAVEDLRMEGHDVSSVVMDVTNTESVQNAVRSVHEQEGRV 91 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcCCC
Confidence 4678999999999999999988888999999999887655443232 432 1 234444322333333221 1369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 92 d~vi~~Ag 99 (260)
T 3awd_A 92 DILVACAG 99 (260)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >2fwm_X 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase; enterobactin, rossman fold, chorismate metabolism, short-CHA oxidoreductase, tetramer; 2.00A {Escherichia coli} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00034 Score=58.82 Aligned_cols=76 Identities=17% Similarity=0.314 Sum_probs=51.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.+. . +.+.. ...|..+..++.+.+.+.. .+++|++++
T Consensus 6 ~~k~vlVTGas~giG~~ia~~l~~~G~~V~~~~r~~~~----~-~~~~~~~~~D~~d~~~~~~~~~~~~~~~g~id~lv~ 80 (250)
T 2fwm_X 6 SGKNVWVTGAGKGIGYATALAFVEAGAKVTGFDQAFTQ----E-QYPFATEVMDVADAAQVAQVCQRLLAETERLDALVN 80 (250)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCCCS----S-CCSSEEEECCTTCHHHHHHHHHHHHHHCSCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCchhh----h-cCCceEEEcCCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 46789999999999999999998899999999987652 2 33431 1234444423333333221 236999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 81 ~Ag~ 84 (250)
T 2fwm_X 81 AAGI 84 (250)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9883
|
| >3dqp_A Oxidoreductase YLBE; alpha-beta protein., structural genomics, PSI-2, protein structure initiative; 1.40A {Lactococcus lactis subsp} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00033 Score=57.52 Aligned_cols=94 Identities=14% Similarity=0.163 Sum_probs=63.5
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE--ecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF--NYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|||+||+|.+|...++.+...|++|+++++++++.+.+ .+. .++ |..+ ..+.+.+... ++|+||+++|.
T Consensus 2 ~ilItGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~---~~~-~~~~~D~~d---~~~~~~~~~~-~~d~vi~~ag~ 73 (219)
T 3dqp_A 2 KIFIVGSTGRVGKSLLKSLSTTDYQIYAGARKVEQVPQY---NNV-KAVHFDVDW---TPEEMAKQLH-GMDAIINVSGS 73 (219)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSCEEEEEESSGGGSCCC---TTE-EEEECCTTS---CHHHHHTTTT-TCSEEEECCCC
T ss_pred eEEEECCCCHHHHHHHHHHHHCCCEEEEEECCccchhhc---CCc-eEEEecccC---CHHHHHHHHc-CCCEEEECCcC
Confidence 699999999999999999988899999999998764321 121 222 3322 1334555443 59999999985
Q ss_pred h----------hHHHHHHhhhhC--CEEEEEceecc
Q 019332 233 K----------MLDAVLLNMKIH--GRIAVCGMISQ 256 (342)
Q Consensus 233 ~----------~~~~~~~~l~~~--G~~v~~g~~~~ 256 (342)
. ....+++.++.. +++|.+++...
T Consensus 74 ~~~~~~~~n~~~~~~l~~a~~~~~~~~iv~~SS~~~ 109 (219)
T 3dqp_A 74 GGKSLLKVDLYGAVKLMQAAEKAEVKRFILLSTIFS 109 (219)
T ss_dssp TTSSCCCCCCHHHHHHHHHHHHTTCCEEEEECCTTT
T ss_pred CCCCcEeEeHHHHHHHHHHHHHhCCCEEEEECcccc
Confidence 2 133455555543 58998887543
|
| >1sby_A Alcohol dehydrogenase; ternary complex, NAD, trifluoroethanol, oxidoreductase; HET: NAD; 1.10A {Scaptodrosophila lebanonensis} SCOP: c.2.1.2 PDB: 1b14_A* 1b15_A* 1a4u_A* 1b2l_A* 1b16_A* 3rj5_A* 3rj9_A* 1mg5_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00067 Score=57.10 Aligned_cols=105 Identities=18% Similarity=0.155 Sum_probs=64.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChh--hHHHHHHHc-CCC-e--eEecCCc-hhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKD--KIDLLKNKF-GFD-E--AFNYKEE-PDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~--~~~~~~~~~-g~~-~--v~~~~~~-~~~~~~i~~~~~--~ 221 (342)
.+.++||+||+|++|.+.++.+...|++ |++++++++ ..+.+.+.. +.. . ..|..+. .++.+.+.+... +
T Consensus 4 ~~k~vlVtGas~gIG~~~a~~l~~~G~~~v~~~~r~~~~~~~~~l~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~g 83 (254)
T 1sby_A 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQLK 83 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHHS
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCcEEEEEecCchHHHHHHHHHhCCCceEEEEEEecCCChHHHHHHHHHHHHhcC
Confidence 4678999999999999999998889995 999888763 334444222 221 1 1244332 133333332211 3
Q ss_pred CccEEEeCCCh---hh---------------HHHHHHhhhh-----CCEEEEEceecc
Q 019332 222 GIDIYFENVGG---KM---------------LDAVLLNMKI-----HGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~---~~---------------~~~~~~~l~~-----~G~~v~~g~~~~ 256 (342)
++|++++++|. +. ...+.+.+.. +|+++.+++...
T Consensus 84 ~id~lv~~Ag~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~~~~g~iv~isS~~~ 141 (254)
T 1sby_A 84 TVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTG 141 (254)
T ss_dssp CCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGG
T ss_pred CCCEEEECCccCCHHHHhhhheeeehhHHHHHHHHHHHHHHhcCCCCCEEEEECchhh
Confidence 69999999983 11 1223344432 588999987654
|
| >1fjh_A 3alpha-hydroxysteroid dehydrogenase/carbonyl reductase; short chain dehydrogenase, SDR, xenobiotic, metyrapone, oligomerisation; 1.68A {Comamonas testosteroni} SCOP: c.2.1.2 PDB: 1fk8_A* | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00019 Score=60.57 Aligned_cols=96 Identities=17% Similarity=0.193 Sum_probs=60.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
.++||+||+|++|.++++.+...|++|+++++++++.+ . ....|..+...+.+.+++ ..+++|++++++|..
T Consensus 2 k~vlVTGas~gIG~~~a~~l~~~G~~V~~~~r~~~~~~----~---~~~~Dl~~~~~v~~~~~~-~~~~id~lv~~Ag~~ 73 (257)
T 1fjh_A 2 SIIVISGCATGIGAATRKVLEAAGHQIVGIDIRDAEVI----A---DLSTAEGRKQAIADVLAK-CSKGMDGLVLCAGLG 73 (257)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHTT-CTTCCSEEEECCCCC
T ss_pred CEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhhc----c---ccccCCCCHHHHHHHHHH-hCCCCCEEEECCCCC
Confidence 37999999999999999988889999999998765421 0 001111111011122221 224689999999852
Q ss_pred h-------------------HHHHHHhhhhC--CEEEEEceeccc
Q 019332 234 M-------------------LDAVLLNMKIH--GRIAVCGMISQY 257 (342)
Q Consensus 234 ~-------------------~~~~~~~l~~~--G~~v~~g~~~~~ 257 (342)
. ...+.+.++.. |++|.+++....
T Consensus 74 ~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~g~iv~isS~~~~ 118 (257)
T 1fjh_A 74 PQTKVLGNVVSVNYFGATELMDAFLPALKKGHQPAAVVISSVASA 118 (257)
T ss_dssp TTCSSHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGGG
T ss_pred CCcccHHHHHHHhhHHHHHHHHHHHHHHhhcCCcEEEEECChhhh
Confidence 1 23344555443 899999876543
|
| >3p19_A BFPVVD8, putative blue fluorescent protein; rossmann-fold, oxidoreductase; HET: NAP; 2.05A {Vibrio vulnificus} | Back alignment and structure |
|---|
Probab=97.57 E-value=8.3e-05 Score=63.32 Aligned_cols=80 Identities=16% Similarity=0.132 Sum_probs=53.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+. ..... ...|..+..++.+.+.+.. .+++|++++
T Consensus 15 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lvn 93 (266)
T 3p19_A 15 MKKLVVITGASSGIGEAIARRFSEEGHPLLLLARRVERLKALN-LPNTLCAQVDVTDKYTFDTAITRAEKIYGPADAIVN 93 (266)
T ss_dssp CCCEEEEESTTSHHHHHHHHHHHHTTCCEEEEESCHHHHHTTC-CTTEEEEECCTTCHHHHHHHHHHHHHHHCSEEEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHhh-cCCceEEEecCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 4578999999999999999998889999999999877654332 11111 1234444312333332221 136999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 94 nAg~ 97 (266)
T 3p19_A 94 NAGM 97 (266)
T ss_dssp CCCC
T ss_pred CCCc
Confidence 9983
|
| >4ibo_A Gluconate dehydrogenase; enzyme function initiative structural genomics, oxidoreductase; 2.10A {Agrobacterium fabrum} | Back alignment and structure |
|---|
Probab=97.57 E-value=0.00017 Score=61.60 Aligned_cols=79 Identities=20% Similarity=0.374 Sum_probs=55.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCe---eEecCCchhHHH---HHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDE---AFNYKEEPDLNE---ALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~~~---~i~~~~~~~ 222 (342)
.|.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +... ..|..+..++.+ .+.+.. ++
T Consensus 25 ~gk~~lVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~-g~ 103 (271)
T 4ibo_A 25 GGRTALVTGSSRGLGRAMAEGLAVAGARILINGTDPSRVAQTVQEFRNVGHDAEAVAFDVTSESEIIEAFARLDEQG-ID 103 (271)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEECCSCHHHHHHHHHHHHHTTCCEEECCCCTTCHHHHHHHHHHHHHHT-CC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhcCCceEEEEcCCCCHHHHHHHHHHHHHHC-CC
Confidence 4689999999999999999998889999999999988766554333 3321 134444322222 233322 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 104 iD~lv~nAg 112 (271)
T 4ibo_A 104 VDILVNNAG 112 (271)
T ss_dssp CCEEEECCC
T ss_pred CCEEEECCC
Confidence 999999998
|
| >3c85_A Putative glutathione-regulated potassium-efflux S protein KEFB; TRKA domain; HET: AMP; 1.90A {Vibrio parahaemolyticus rimd 2210633} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.001 Score=52.91 Aligned_cols=93 Identities=13% Similarity=0.098 Sum_probs=65.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeE-ecCCchhHHHHHHHH-CCCCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAF-NYKEEPDLNEALKRY-FPEGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~i~~~-~~~~~d~vid~ 229 (342)
+++|+|.|+ |.+|..+++.++.. |.+|+++++++++.+.++ +.|...+. |..+. +.+.+. .-.++|+++.+
T Consensus 39 ~~~v~IiG~-G~~G~~~a~~L~~~~g~~V~vid~~~~~~~~~~-~~g~~~~~gd~~~~----~~l~~~~~~~~ad~vi~~ 112 (183)
T 3c85_A 39 HAQVLILGM-GRIGTGAYDELRARYGKISLGIEIREEAAQQHR-SEGRNVISGDATDP----DFWERILDTGHVKLVLLA 112 (183)
T ss_dssp TCSEEEECC-SHHHHHHHHHHHHHHCSCEEEEESCHHHHHHHH-HTTCCEEECCTTCH----HHHHTBCSCCCCCEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHhccCCeEEEEECCHHHHHHHH-HCCCCEEEcCCCCH----HHHHhccCCCCCCEEEEe
Confidence 568999996 99999999999988 999999999999988888 77875432 33332 234444 12379999999
Q ss_pred CCh-hhHHHHHHhhhh---CCEEEEE
Q 019332 230 VGG-KMLDAVLLNMKI---HGRIAVC 251 (342)
Q Consensus 230 ~g~-~~~~~~~~~l~~---~G~~v~~ 251 (342)
.+. .....+...++. ..+++..
T Consensus 113 ~~~~~~~~~~~~~~~~~~~~~~ii~~ 138 (183)
T 3c85_A 113 MPHHQGNQTALEQLQRRNYKGQIAAI 138 (183)
T ss_dssp CSSHHHHHHHHHHHHHTTCCSEEEEE
T ss_pred CCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 997 333344444444 4466543
|
| >1dhr_A Dihydropteridine reductase; oxidoreductase(acting on NADH or NADPH); HET: NAD; 2.30A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1dir_A* 1hdr_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=5.4e-05 Score=63.44 Aligned_cols=77 Identities=10% Similarity=0.088 Sum_probs=49.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchh---HHHHHHHHCC-CCccEE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD---LNEALKRYFP-EGIDIY 226 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~~~~i~~~~~-~~~d~v 226 (342)
..+.++||+||+|++|.+.++.+...|++|+++++++++.+. .. .....|..+..+ +.+.+.+..+ +++|++
T Consensus 5 ~~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~---~~-~~~~~D~~~~~~v~~~~~~~~~~~~~g~iD~l 80 (241)
T 1dhr_A 5 GEARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS---AS-VIVKMTDSFTEQADQVTAEVGKLLGDQKVDAI 80 (241)
T ss_dssp -CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS---EE-EECCCCSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCChhhccC---Cc-EEEEcCCCCHHHHHHHHHHHHHHhCCCCCCEE
Confidence 356789999999999999999998889999999988764210 00 000123322212 2223333332 469999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 81 v~~Ag 85 (241)
T 1dhr_A 81 LCVAG 85 (241)
T ss_dssp EECCC
T ss_pred EEccc
Confidence 99988
|
| >1mxh_A Pteridine reductase 2; SDR topology, protein-substrate complex, oxidoreductase; HET: NAP DHF; 2.20A {Trypanosoma cruzi} SCOP: c.2.1.2 PDB: 1mxf_A* | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00025 Score=60.54 Aligned_cols=80 Identities=13% Similarity=0.074 Sum_probs=53.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHc----CCC-ee--EecCCc----hhHHHHHHHHC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKF----GFD-EA--FNYKEE----PDLNEALKRYF 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~~----g~~-~v--~~~~~~----~~~~~~i~~~~ 219 (342)
.+.++||+||+|++|.+.++.+...|++|+++++ ++++.+.+.+++ +.. .. .|..+. ..+.+.+.+..
T Consensus 10 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~ 89 (276)
T 1mxh_A 10 ECPAAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEGAAQRLVAELNAARAGSAVLCKGDLSLSSSLLDCCEDIIDCSF 89 (276)
T ss_dssp -CCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHSTTCEEEEECCCSSSTTHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHHhcCCceEEEeccCCCccccHHHHHHHHHHHH
Confidence 4678999999999999999988889999999999 877665544233 432 11 233332 23333333221
Q ss_pred --CCCccEEEeCCC
Q 019332 220 --PEGIDIYFENVG 231 (342)
Q Consensus 220 --~~~~d~vid~~g 231 (342)
.+++|++++++|
T Consensus 90 ~~~g~id~lv~nAg 103 (276)
T 1mxh_A 90 RAFGRCDVLVNNAS 103 (276)
T ss_dssp HHHSCCCEEEECCC
T ss_pred HhcCCCCEEEECCC
Confidence 136999999998
|
| >2qq5_A DHRS1, dehydrogenase/reductase SDR family member 1; short-chain, structura genomics consortium, SGC, oxidoreductase; 1.80A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.56 E-value=0.00043 Score=58.57 Aligned_cols=80 Identities=14% Similarity=0.206 Sum_probs=55.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHH---CCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRY---FPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~---~~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+. ..+.
T Consensus 4 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 83 (260)
T 2qq5_A 4 NGQVCVVTGASRGIGRGIALQLCKAGATVYITGRHLDTLRVVAQEAQSLGGQCVPVVCDSSQESEVRSLFEQVDREQQGR 83 (260)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHSSEEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHcCCceEEEECCCCCHHHHHHHHHHHHHhcCCC
Confidence 4678999999999999999998889999999999987765544233 431 1 13444432333333332 1346
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 84 id~lvnnAg 92 (260)
T 2qq5_A 84 LDVLVNNAY 92 (260)
T ss_dssp CCEEEECCC
T ss_pred ceEEEECCc
Confidence 999999994
|
| >3qvo_A NMRA family protein; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, unknown function; HET: MNB; 2.30A {Shigella flexneri 2A} | Back alignment and structure |
|---|
Probab=97.56 E-value=9.4e-05 Score=61.71 Aligned_cols=96 Identities=21% Similarity=0.132 Sum_probs=64.1
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+|||+||+|++|.++++.+...| ++|+++++++++.+.+. ..++.. ..|..+. +.+.+... ++|++|+++|
T Consensus 24 k~vlVtGatG~iG~~l~~~L~~~G~~~V~~~~R~~~~~~~~~-~~~~~~~~~Dl~d~----~~~~~~~~-~~D~vv~~a~ 97 (236)
T 3qvo_A 24 KNVLILGAGGQIARHVINQLADKQTIKQTLFARQPAKIHKPY-PTNSQIIMGDVLNH----AALKQAMQ-GQDIVYANLT 97 (236)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEEEEESSGGGSCSSC-CTTEEEEECCTTCH----HHHHHHHT-TCSEEEEECC
T ss_pred cEEEEEeCCcHHHHHHHHHHHhCCCceEEEEEcChhhhcccc-cCCcEEEEecCCCH----HHHHHHhc-CCCEEEEcCC
Confidence 589999999999999999999899 79999999887643322 112211 2344443 23333322 4899999988
Q ss_pred hhh----HHHHHHhhhhC--CEEEEEceec
Q 019332 232 GKM----LDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 232 ~~~----~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
... ...+++.++.. +++|.+++..
T Consensus 98 ~~~~~~~~~~~~~~~~~~~~~~iV~iSS~~ 127 (236)
T 3qvo_A 98 GEDLDIQANSVIAAMKACDVKRLIFVLSLG 127 (236)
T ss_dssp STTHHHHHHHHHHHHHHTTCCEEEEECCCC
T ss_pred CCchhHHHHHHHHHHHHcCCCEEEEEecce
Confidence 732 33455555553 6899888744
|
| >2ag5_A DHRS6, dehydrogenase/reductase (SDR family) member 6; protein-CO-factor complex, structural genomics, structural G consortium, SGC, oxidoreductase; HET: NAD; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.55 E-value=0.00028 Score=59.18 Aligned_cols=77 Identities=18% Similarity=0.354 Sum_probs=54.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC-CC-eeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG-FD-EAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g-~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+.+. ++. +. ...|..+. +-.+.+.+.. +++|+++++
T Consensus 5 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~D~~~~-~~~~~~~~~~-~~id~lv~~ 81 (246)
T 2ag5_A 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELE-KYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNV 81 (246)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGG-GSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hccCceEEEeeCCCH-HHHHHHHHHh-CCCCEEEEC
Confidence 4678999999999999999998889999999999887765443 332 11 12344444 3333333332 369999999
Q ss_pred CC
Q 019332 230 VG 231 (342)
Q Consensus 230 ~g 231 (342)
+|
T Consensus 82 Ag 83 (246)
T 2ag5_A 82 AG 83 (246)
T ss_dssp CC
T ss_pred Cc
Confidence 88
|
| >2bgk_A Rhizome secoisolariciresinol dehydrogenase; oxidoreductase; 1.6A {Podophyllum peltatum} SCOP: c.2.1.2 PDB: 2bgl_A* 2bgm_A* | Back alignment and structure |
|---|
Probab=97.54 E-value=0.00037 Score=59.49 Aligned_cols=80 Identities=21% Similarity=0.323 Sum_probs=54.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC--C-e--eEecCCchhHHHHHHHHC--CCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF--D-E--AFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~--~-~--v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++++. . . ..|..+..++.+.+.+.. .+++|
T Consensus 15 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~id 94 (278)
T 2bgk_A 15 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 94 (278)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred cCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCChhHHHHHHHHhCCCCceEEEECCCCCHHHHHHHHHHHHHHcCCCC
Confidence 467899999999999999998888899999999988766555435542 1 1 134444322333332221 13699
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++++++|
T Consensus 95 ~li~~Ag 101 (278)
T 2bgk_A 95 IMFGNVG 101 (278)
T ss_dssp EEEECCC
T ss_pred EEEECCc
Confidence 9999887
|
| >2pnf_A 3-oxoacyl-[acyl-carrier-protein] reductase; short chain oxidoreductase, rossmann fold, oxidoreductase; HET: 1PE MES; 1.80A {Aquifex aeolicus} PDB: 2p68_A* | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00039 Score=58.22 Aligned_cols=81 Identities=21% Similarity=0.444 Sum_probs=55.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----cCCC-ee--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK----FGFD-EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.++ .+.. .. .|..+..++.+.+.+.. .++
T Consensus 6 ~~~~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (248)
T 2pnf_A 6 QGKVSLVTGSTRGIGRAIAEKLASAGSTVIITGTSGERAKAVAEEIANKYGVKAHGVEMNLLSEESINKAFEEIYNLVDG 85 (248)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHSSC
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHHHhhcCCceEEEEccCCCHHHHHHHHHHHHHhcCC
Confidence 467899999999999999998888999999999988776554422 3432 11 24444322333332221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 86 ~d~vi~~Ag~ 95 (248)
T 2pnf_A 86 IDILVNNAGI 95 (248)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >1h5q_A NADP-dependent mannitol dehydrogenase; oxidoreductase, mannitol metabolism; HET: NAP; 1.50A {Agaricus bisporus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00052 Score=58.05 Aligned_cols=81 Identities=11% Similarity=0.128 Sum_probs=52.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHH-HH---HHcCCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL-LK---NKFGFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~-~~---~~~g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++... +. ++.+.. . ..|..+...+.+.+++.. .+.
T Consensus 13 ~~k~vlITGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~~~ 92 (265)
T 1h5q_A 13 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADLGP 92 (265)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHSCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCcchhhHHHHHHHHHhcCCeeEEEEeeCCCHHHHHHHHHHHHHhcCC
Confidence 45789999999999999999888889999999986544322 21 123432 1 234444422333333221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 93 id~li~~Ag~ 102 (265)
T 1h5q_A 93 ISGLIANAGV 102 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999883
|
| >2cfc_A 2-(R)-hydroxypropyl-COM dehydrogenase; NAD, oxidoreductase; HET: NAD KPC; 1.8A {Xanthobacter autotrophicus} | Back alignment and structure |
|---|
Probab=97.53 E-value=0.00028 Score=59.22 Aligned_cols=79 Identities=18% Similarity=0.189 Sum_probs=54.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-e--eEecCCchhHHHHHHHHCC--CCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-E--AFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
+.++||+||+|++|.+.+..+...|++|+++++++++.+.+.+++ +.. . ..|..+..++.+.+.+... +++
T Consensus 2 ~k~vlItGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~i 81 (250)
T 2cfc_A 2 SRVAIVTGASSGNGLAIATRFLARGDRVAALDLSAETLEETARTHWHAYADKVLRVRADVADEGDVNAAIAATMEQFGAI 81 (250)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHSTTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCEEEEeCCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHhCCC
Confidence 468999999999999999988889999999999988776554343 221 1 1344443223333322211 369
Q ss_pred cEEEeCCC
Q 019332 224 DIYFENVG 231 (342)
Q Consensus 224 d~vid~~g 231 (342)
|++++++|
T Consensus 82 d~li~~Ag 89 (250)
T 2cfc_A 82 DVLVNNAG 89 (250)
T ss_dssp CEEEECCC
T ss_pred CEEEECCC
Confidence 99999987
|
| >1qsg_A Enoyl-[acyl-carrier-protein] reductase; enoyl reductase, oxidoreductase; HET: GLC NAD TCL; 1.75A {Escherichia coli} SCOP: c.2.1.2 PDB: 1c14_A* 1i2z_A* 1i30_A* 1lx6_A* 1lxc_A* 1mfp_A* 2fhs_A 1qg6_A* 1dfg_A* 1dfh_A* 1d8a_A* 1dfi_A* 3pje_A* 3pjd_A* 3pjf_A* | Back alignment and structure |
|---|
Probab=97.51 E-value=0.00057 Score=57.96 Aligned_cols=81 Identities=10% Similarity=0.190 Sum_probs=54.0
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCCh---hhHHHHHHHcCCCee--EecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK---DKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~---~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+ |++|.++++.+...|++|+++++++ +..+.+.++.+.... .|..+..++.+.+.+... ++
T Consensus 8 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 87 (265)
T 1qsg_A 8 SGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWPK 87 (265)
T ss_dssp TTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCSS
T ss_pred CCCEEEEECCCCCCCHHHHHHHHHHHCCCEEEEEcCcHHHHHHHHHHHHhcCCcEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 46789999998 9999999998888999999999876 333333323343222 354544233333333322 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 88 iD~lv~~Ag~ 97 (265)
T 1qsg_A 88 FDGFVHSIGF 97 (265)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >1w6u_A 2,4-dienoyl-COA reductase, mitochondrial precursor; short chain dehydrogenase, beta- oxidation, NADP, oxidoreductase; HET: HXC NAP; 1.75A {Homo sapiens} SCOP: c.2.1.2 PDB: 1w73_A* 1w8d_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.00037 Score=60.29 Aligned_cols=80 Identities=15% Similarity=0.267 Sum_probs=54.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+.. .+.
T Consensus 25 ~~k~vlITGasggiG~~la~~L~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (302)
T 1w6u_A 25 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 104 (302)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHHhcCCceEEEEeCCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999988889999999999987765444232 432 1 134444312333332221 236
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 105 id~li~~Ag 113 (302)
T 1w6u_A 105 PNIVINNAA 113 (302)
T ss_dssp CSEEEECCC
T ss_pred CCEEEECCC
Confidence 899999998
|
| >3afn_B Carbonyl reductase; alpha/beta/alpha, rossmann-fold, oxidoreductase; HET: NAP; 1.63A {Sphingomonas SP} PDB: 3afm_A* | Back alignment and structure |
|---|
Probab=97.50 E-value=0.0003 Score=59.24 Aligned_cols=81 Identities=22% Similarity=0.338 Sum_probs=53.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++ .++.+.+.+++ +.. . ..|..+..++.+.+.+... ++
T Consensus 6 ~~k~vlVTGasggiG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~ 85 (258)
T 3afn_B 6 KGKRVLITGSSQGIGLATARLFARAGAKVGLHGRKAPANIDETIASMRADGGDAAFFAADLATSEACQQLVDEFVAKFGG 85 (258)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCCTTHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEeCCCChHHHHHHHHHHHCCCEEEEECCCchhhHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 35789999999999999999888899999999988 66555443232 331 1 1344443233333332211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++|+++|.
T Consensus 86 id~vi~~Ag~ 95 (258)
T 3afn_B 86 IDVLINNAGG 95 (258)
T ss_dssp CSEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >1oaa_A Sepiapterin reductase; tetrahydrobiopterin, oxidoreductase; HET: NAP; 1.25A {Mus musculus} SCOP: c.2.1.2 PDB: 1nas_A* 1sep_A* 1z6z_A* | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00058 Score=57.71 Aligned_cols=80 Identities=20% Similarity=0.284 Sum_probs=53.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHH---cCCEEEEEeCChhhHHHHHHHc-----CCC-e--eEecCCchhHHHHHHHH--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKIDLLKNKF-----GFD-E--AFNYKEEPDLNEALKRY-- 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~---~ga~Vi~~~~s~~~~~~~~~~~-----g~~-~--v~~~~~~~~~~~~i~~~-- 218 (342)
.+.++||+|++|++|.+.++.+.. .|++|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.+.
T Consensus 5 ~~k~~lVTGas~gIG~~ia~~l~~~~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~ 84 (259)
T 1oaa_A 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCcEEEEeCCCChHHHHHHHHHHHhhcCCCeEEEEeCCHHHHHHHHHHHHhhCCCCeEEEEecCCCCHHHHHHHHHHHHh
Confidence 357899999999999998887776 8999999999987766554333 321 1 13444442333333333
Q ss_pred --CCCCcc--EEEeCCC
Q 019332 219 --FPEGID--IYFENVG 231 (342)
Q Consensus 219 --~~~~~d--~vid~~g 231 (342)
..+.+| ++++++|
T Consensus 85 ~~~~g~~d~~~lvnnAg 101 (259)
T 1oaa_A 85 LPRPEGLQRLLLINNAA 101 (259)
T ss_dssp SCCCTTCCEEEEEECCC
T ss_pred ccccccCCccEEEECCc
Confidence 223577 9999887
|
| >3e48_A Putative nucleoside-diphosphate-sugar epimerase; alpha-beta protein., structural genomics, PSI-2, protein STR initiative; 1.60A {Staphylococcus aureus subsp} | Back alignment and structure |
|---|
Probab=97.49 E-value=0.00038 Score=59.75 Aligned_cols=96 Identities=14% Similarity=0.113 Sum_probs=65.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|||+||+|.+|..+++.+... |.+|+++++++++...+. ..+... ..|..+. +.+.+... ++|+||.+++.
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~g~~V~~~~R~~~~~~~~~-~~~v~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~~ 75 (289)
T 3e48_A 2 NIMLTGATGHLGTHITNQAIANHIDHFHIGVRNVEKVPDDW-RGKVSVRQLDYFNQ----ESMVEAFK-GMDTVVFIPSI 75 (289)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCTTEEEEESSGGGSCGGG-BTTBEEEECCTTCH----HHHHHHTT-TCSEEEECCCC
T ss_pred EEEEEcCCchHHHHHHHHHhhCCCCcEEEEECCHHHHHHhh-hCCCEEEEcCCCCH----HHHHHHHh-CCCEEEEeCCC
Confidence 5899999999999998888776 899999999987754433 334322 2344443 34444443 59999999885
Q ss_pred --------hhHHHHHHhhhhC--CEEEEEceecc
Q 019332 233 --------KMLDAVLLNMKIH--GRIAVCGMISQ 256 (342)
Q Consensus 233 --------~~~~~~~~~l~~~--G~~v~~g~~~~ 256 (342)
.....+++.++.. ++++.+++...
T Consensus 76 ~~~~~~~~~~~~~l~~aa~~~gv~~iv~~Ss~~~ 109 (289)
T 3e48_A 76 IHPSFKRIPEVENLVYAAKQSGVAHIIFIGYYAD 109 (289)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTTCCEEEEEEESCC
T ss_pred CccchhhHHHHHHHHHHHHHcCCCEEEEEcccCC
Confidence 1233455555554 48888887543
|
| >3a28_C L-2.3-butanediol dehydrogenase; chiral substrate recognition, oxidoreductase; HET: NAD; 2.00A {Brevibacterium saccharolyticum} | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00037 Score=58.91 Aligned_cols=80 Identities=9% Similarity=0.163 Sum_probs=52.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
+.++||+||+|++|.+.++.+...|++|++++++.++ .+.+.+++ +.. . ..|..+..++.+.+.+.. .++
T Consensus 2 ~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 81 (258)
T 3a28_C 2 SKVAMVTGGAQGIGRGISEKLAADGFDIAVADLPQQEEQAAETIKLIEAADQKAVFVGLDVTDKANFDSAIDEAAEKLGG 81 (258)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECGGGHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHHTC
T ss_pred CCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcchHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5689999999999999988888889999999988776 44433233 322 1 134444312222222221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 82 iD~lv~nAg~ 91 (258)
T 3a28_C 82 FDVLVNNAGI 91 (258)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >2dtx_A Glucose 1-dehydrogenase related protein; rossmann fold, oxidoreductase; HET: BMA; 1.60A {Thermoplasma acidophilum} PDB: 2dtd_A* 2dte_A* 2zk7_A | Back alignment and structure |
|---|
Probab=97.48 E-value=0.00038 Score=59.08 Aligned_cols=74 Identities=15% Similarity=0.260 Sum_probs=50.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCC--CCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFP--EGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~--~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++ .-.+. ...|..+..++.+.+.+... +++|++++
T Consensus 7 ~~k~vlVTGas~gIG~~ia~~l~~~G~~V~~~~r~~~~------~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~iD~lv~ 80 (264)
T 2dtx_A 7 RDKVVIVTGASMGIGRAIAERFVDEGSKVIDLSIHDPG------EAKYDHIECDVTNPDQVKASIDHIFKEYGSISVLVN 80 (264)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESSCCC------SCSSEEEECCTTCHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEecCccc------CCceEEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 35789999999999999999998899999999987654 11111 12344443123333332211 36999999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
++|
T Consensus 81 ~Ag 83 (264)
T 2dtx_A 81 NAG 83 (264)
T ss_dssp CCC
T ss_pred CCC
Confidence 988
|
| >3o38_A Short chain dehydrogenase; tuberculosis, ortholog from A non-pathogenic dehydrogenase, structural genomics; 1.95A {Mycobacterium smegmatis} | Back alignment and structure |
|---|
Probab=97.47 E-value=0.00032 Score=59.56 Aligned_cols=80 Identities=21% Similarity=0.391 Sum_probs=54.7
Q ss_pred CCCEEEEecCCc-HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC--e--eEecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASG-AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD--E--AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g-~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~--~--v~~~~~~~~~~~~i~~~~~--~ 221 (342)
.+.++||+||+| ++|.+.++.+...|++|++++++.++.+.+.+++ +.. . ..|..+..++.+.+.+... +
T Consensus 21 ~~k~vlITGasg~GIG~~~a~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 100 (266)
T 3o38_A 21 KGKVVLVTAAAGTGIGSTTARRALLEGADVVISDYHERRLGETRDQLADLGLGRVEAVVCDVTSTEAVDALITQTVEKAG 100 (266)
T ss_dssp TTCEEEESSCSSSSHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTCSSCEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHCCCEEEEecCCHHHHHHHHHHHHhcCCCceEEEEeCCCCHHHHHHHHHHHHHHhC
Confidence 468999999985 8999999988888999999999988766555344 211 1 2344444223222222211 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
.+|++++++|
T Consensus 101 ~id~li~~Ag 110 (266)
T 3o38_A 101 RLDVLVNNAG 110 (266)
T ss_dssp CCCEEEECCC
T ss_pred CCcEEEECCC
Confidence 6999999998
|
| >3sc4_A Short chain dehydrogenase (A0QTM2 homolog); ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; 2.50A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.46 E-value=0.00032 Score=60.34 Aligned_cols=80 Identities=23% Similarity=0.302 Sum_probs=53.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-------H----HHHHHHcCCC-e--eEecCCchhHHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------I----DLLKNKFGFD-E--AFNYKEEPDLNEALKR 217 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-------~----~~~~~~~g~~-~--v~~~~~~~~~~~~i~~ 217 (342)
.+.++||+||++++|.+.++.+...|++|+++++++++ . +.++ +.+.. . ..|..+..++.+.+.+
T Consensus 8 ~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~Dv~~~~~v~~~~~~ 86 (285)
T 3sc4_A 8 RGKTMFISGGSRGIGLAIAKRVAADGANVALVAKSAEPHPKLPGTIYTAAKEIE-EAGGQALPIVGDIRDGDAVAAAVAK 86 (285)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHTTTCEEEEEESCCSCCSSSCCCHHHHHHHHH-HHTSEEEEEECCTTSHHHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECChhhhhhhhHHHHHHHHHHH-hcCCcEEEEECCCCCHHHHHHHHHH
Confidence 46799999999999999999888889999999988752 2 2233 34442 1 2244444222222322
Q ss_pred HCC--CCccEEEeCCCh
Q 019332 218 YFP--EGIDIYFENVGG 232 (342)
Q Consensus 218 ~~~--~~~d~vid~~g~ 232 (342)
... +++|++++++|.
T Consensus 87 ~~~~~g~id~lvnnAg~ 103 (285)
T 3sc4_A 87 TVEQFGGIDICVNNASA 103 (285)
T ss_dssp HHHHHSCCSEEEECCCC
T ss_pred HHHHcCCCCEEEECCCC
Confidence 211 369999999983
|
| >1yxm_A Pecra, peroxisomal trans 2-enoyl COA reductase; perioxisomes, fatty acid synthesis, short-chain dehydrogenases/reductases, structural genomics; HET: ADE; 1.90A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00049 Score=59.60 Aligned_cols=80 Identities=18% Similarity=0.290 Sum_probs=54.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--------CCC-ee--EecCCchhHHHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--------GFD-EA--FNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--------g~~-~v--~~~~~~~~~~~~i~~~~~ 220 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+.+.+++ +.. .. .|..+...+.+.+.+...
T Consensus 17 ~~k~vlVTGasggIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~ 96 (303)
T 1yxm_A 17 QGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKSTLD 96 (303)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHHhhccccCCccEEEEecCCCCHHHHHHHHHHHHH
Confidence 4679999999999999999988889999999999987765544232 221 11 344443123332322211
Q ss_pred --CCccEEEeCCC
Q 019332 221 --EGIDIYFENVG 231 (342)
Q Consensus 221 --~~~d~vid~~g 231 (342)
+++|++|+++|
T Consensus 97 ~~g~id~li~~Ag 109 (303)
T 1yxm_A 97 TFGKINFLVNNGG 109 (303)
T ss_dssp HHSCCCEEEECCC
T ss_pred HcCCCCEEEECCC
Confidence 35999999998
|
| >3v2h_A D-beta-hydroxybutyrate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 3.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00046 Score=59.18 Aligned_cols=80 Identities=15% Similarity=0.253 Sum_probs=52.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHc----CCC-e--eEecCCchhHHH---HHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKF----GFD-E--AFNYKEEPDLNE---ALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~~----g~~-~--v~~~~~~~~~~~---~i~~~~~ 220 (342)
.+.++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.+++ +.. . ..|..+..++.+ .+.+..
T Consensus 24 ~~k~~lVTGas~GIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~- 102 (281)
T 3v2h_A 24 MTKTAVITGSTSGIGLAIARTLAKAGANIVLNGFGAPDEIRTVTDEVAGLSSGTVLHHPADMTKPSEIADMMAMVADRF- 102 (281)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEECCCCHHHHHHHHHHHHTTCSSCEEEECCCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHhhccCCcEEEEeCCCCCHHHHHHHHHHHHHHC-
Confidence 4579999999999999999999899999999998 445444433232 221 1 124444322322 333322
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 103 g~iD~lv~nAg~ 114 (281)
T 3v2h_A 103 GGADILVNNAGV 114 (281)
T ss_dssp SSCSEEEECCCC
T ss_pred CCCCEEEECCCC
Confidence 369999999883
|
| >3ezl_A Acetoacetyl-COA reductase; ssgcid, acetyacetyl-COA reductase, oxidoreductase, structural genomics; HET: P4C; 2.25A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.45 E-value=0.00042 Score=58.41 Aligned_cols=81 Identities=20% Similarity=0.221 Sum_probs=50.5
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHH---HcCCC-ee--EecCCchhH---HHHHHHHC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKN---KFGFD-EA--FNYKEEPDL---NEALKRYF 219 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~---~~g~~-~v--~~~~~~~~~---~~~i~~~~ 219 (342)
..++.++||+||+|++|.+.++.+...|++|++++ ++.++.+...+ +.+.. .. .|..+..++ .+.+.+..
T Consensus 10 ~~~~k~vlITGas~giG~~ia~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 89 (256)
T 3ezl_A 10 VMSQRIAYVTGGMGGIGTSICQRLHKDGFRVVAGCGPNSPRRVKWLEDQKALGFDFYASEGNVGDWDSTKQAFDKVKAEV 89 (256)
T ss_dssp ---CEEEEETTTTSHHHHHHHHHHHHTTEEEEEEECTTCSSHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHT
T ss_pred CCCCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCeeEEEecCCCCHHHHHHHHHHHHHhc
Confidence 35678999999999999999988888899999888 44433322221 33432 12 244443122 23333332
Q ss_pred CCCccEEEeCCC
Q 019332 220 PEGIDIYFENVG 231 (342)
Q Consensus 220 ~~~~d~vid~~g 231 (342)
+++|++++++|
T Consensus 90 -g~id~lv~~Ag 100 (256)
T 3ezl_A 90 -GEIDVLVNNAG 100 (256)
T ss_dssp -CCEEEEEECCC
T ss_pred -CCCCEEEECCC
Confidence 36999999988
|
| >3uxy_A Short-chain dehydrogenase/reductase SDR; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; HET: NAD; 2.10A {Rhodobacter sphaeroides} | Back alignment and structure |
|---|
Probab=97.43 E-value=9.1e-05 Score=63.07 Aligned_cols=75 Identities=20% Similarity=0.248 Sum_probs=50.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchh---HHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD---LNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~~~~i~~~~~~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++.+... .+ ..|..+... +.+.+.+.. +++|++++
T Consensus 27 ~gk~vlVTGas~gIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~----~~Dv~~~~~~~~~~~~~~~~~-g~iD~lvn 100 (266)
T 3uxy_A 27 EGKVALVTGAAGGIGGAVVTALRAAGARVAVADRAVAGIAADL-HL----PGDLREAAYADGLPGAVAAGL-GRLDIVVN 100 (266)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEECSSCCTTSCCSE-EC----CCCTTSHHHHHHHHHHHHHHH-SCCCEEEE
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHhhh-cc----CcCCCCHHHHHHHHHHHHHhc-CCCCEEEE
Confidence 4689999999999999999988889999999998765432111 11 123333312 222222222 36999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 101 nAg~ 104 (266)
T 3uxy_A 101 NAGV 104 (266)
T ss_dssp CCCC
T ss_pred CCCC
Confidence 9983
|
| >3kzv_A Uncharacterized oxidoreductase YIR035C; cytoplasmic protein, unknown function, structural genomics, MCSG, protein structure initiative; 2.00A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=97.43 E-value=0.0003 Score=59.35 Aligned_cols=80 Identities=23% Similarity=0.292 Sum_probs=53.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHC--CCCccE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYF--PEGIDI 225 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~--~~~~d~ 225 (342)
+.++||+||++++|.+.++.+... |++|+.+.+++++.+.+.++++... ..|..+..++.+.+.+.. .+++|+
T Consensus 2 gk~~lVTGas~GIG~aia~~l~~~g~~~~v~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~id~ 81 (254)
T 3kzv_A 2 GKVILVTGVSRGIGKSIVDVLFSLDKDTVVYGVARSEAPLKKLKEKYGDRFFYVVGDITEDSVLKQLVNAAVKGHGKIDS 81 (254)
T ss_dssp CCEEEECSTTSHHHHHHHHHHHHHCSSCEEEEEESCHHHHHHHHHHHGGGEEEEESCTTSHHHHHHHHHHHHHHHSCCCE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCCeEEEEecCCHHHHHHHHHHhCCceEEEECCCCCHHHHHHHHHHHHHhcCCccE
Confidence 468999999999999887766555 5799999999988777765555421 234444412222222221 136999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 82 lvnnAg~ 88 (254)
T 3kzv_A 82 LVANAGV 88 (254)
T ss_dssp EEEECCC
T ss_pred EEECCcc
Confidence 9998884
|
| >3enk_A UDP-glucose 4-epimerase; seattle structural genomics center for infectious disease, ssgcid, isomerase, NAD; HET: NAD GUD; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00074 Score=59.37 Aligned_cols=101 Identities=15% Similarity=0.109 Sum_probs=62.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHH----HHHHcCCC-ee--EecCCchhHHHHHHHHCCCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL----LKNKFGFD-EA--FNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~----~~~~~g~~-~v--~~~~~~~~~~~~i~~~~~~~~d 224 (342)
.+.+|||+||+|.+|..+++.+...|++|++++++.++... +.+..+.. .. .|..+...+.+.+.+ +++|
T Consensus 4 ~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d 80 (341)
T 3enk_A 4 TKGTILVTGGAGYIGSHTAVELLAHGYDVVIADNLVNSKREAIARIEKITGKTPAFHETDVSDERALARIFDA---HPIT 80 (341)
T ss_dssp SSCEEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSSCTHHHHHHHHHHSCCCEEECCCTTCHHHHHHHHHH---SCCC
T ss_pred CCcEEEEecCCcHHHHHHHHHHHHCCCcEEEEecCCcchHHHHHHHHhhcCCCceEEEeecCCHHHHHHHHhc---cCCc
Confidence 35689999999999999999998899999999986543322 22111321 22 244443123333322 3699
Q ss_pred EEEeCCChh------------------hHHHHHHhhhhC--CEEEEEceec
Q 019332 225 IYFENVGGK------------------MLDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 225 ~vid~~g~~------------------~~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
+|++++|.. ....+++.++.. +++|.+++..
T Consensus 81 ~vih~A~~~~~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~iv~~SS~~ 131 (341)
T 3enk_A 81 AAIHFAALKAVGESVAKPIEYYRNNLDSLLSLLRVMRERAVKRIVFSSSAT 131 (341)
T ss_dssp EEEECCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHHHTTCCEEEEEEEGG
T ss_pred EEEECccccccCccccChHHHHHHHHHHHHHHHHHHHhCCCCEEEEEecce
Confidence 999999841 012234444443 5899887643
|
| >3uve_A Carveol dehydrogenase ((+)-trans-carveol dehydrog; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; HET: NAD PG4; 1.55A {Mycobacterium avium} SCOP: c.2.1.0 PDB: 3uwr_A* | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00046 Score=59.27 Aligned_cols=80 Identities=14% Similarity=0.191 Sum_probs=52.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC----------------hhhHHHHHHH---cCCC-e--eEecCCch
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----------------KDKIDLLKNK---FGFD-E--AFNYKEEP 209 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s----------------~~~~~~~~~~---~g~~-~--v~~~~~~~ 209 (342)
.+.++||+||++++|.+.++.+...|++|++++++ .++.+.+.++ .+.. . ..|..+..
T Consensus 10 ~~k~~lVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~ 89 (286)
T 3uve_A 10 EGKVAFVTGAARGQGRSHAVRLAQEGADIIAVDICKPIRAGVVDTAIPASTPEDLAETADLVKGHNRRIVTAEVDVRDYD 89 (286)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCSBTTBCCCSSCCCCHHHHHHHHHHHHTTTCCEEEEECCTTCHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeccccccccccccccccCCHHHHHHHHHHHhhcCCceEEEEcCCCCHH
Confidence 56899999999999999999998999999999876 4444443322 2322 1 23444442
Q ss_pred hHHHHHHHHCC--CCccEEEeCCC
Q 019332 210 DLNEALKRYFP--EGIDIYFENVG 231 (342)
Q Consensus 210 ~~~~~i~~~~~--~~~d~vid~~g 231 (342)
++.+.+.+... +++|++++++|
T Consensus 90 ~v~~~~~~~~~~~g~id~lv~nAg 113 (286)
T 3uve_A 90 ALKAAVDSGVEQLGRLDIIVANAG 113 (286)
T ss_dssp HHHHHHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHHHHHhCCCCEEEECCc
Confidence 23222222211 36999999988
|
| >3dhn_A NAD-dependent epimerase/dehydratase; reductase, PF01370, Q89Z24_bactn, NESG, BTR310, structural genomics, PSI-2; 2.00A {Bacteroides thetaiotaomicron} | Back alignment and structure |
|---|
Probab=97.42 E-value=0.00087 Score=55.21 Aligned_cols=95 Identities=16% Similarity=0.127 Sum_probs=62.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+. -+... ..|..+. +.+.+... ++|+||.++|.
T Consensus 5 ~~ilItGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~Dl~d~----~~~~~~~~-~~d~vi~~a~~ 77 (227)
T 3dhn_A 5 KKIVLIGASGFVGSALLNEALNRGFEVTAVVRHPEKIKIEN--EHLKVKKADVSSL----DEVCEVCK-GADAVISAFNP 77 (227)
T ss_dssp CEEEEETCCHHHHHHHHHHHHTTTCEEEEECSCGGGCCCCC--TTEEEECCCTTCH----HHHHHHHT-TCSEEEECCCC
T ss_pred CEEEEEcCCchHHHHHHHHHHHCCCEEEEEEcCcccchhcc--CceEEEEecCCCH----HHHHHHhc-CCCEEEEeCcC
Confidence 57999999999999999999999999999999987643211 11111 1233333 23333332 49999999985
Q ss_pred h------------hHHHHHHhhhhC--CEEEEEceec
Q 019332 233 K------------MLDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 233 ~------------~~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
. ....+++.++.. ++++.+++..
T Consensus 78 ~~~~~~~~~~n~~~~~~l~~~~~~~~~~~~v~~Ss~~ 114 (227)
T 3dhn_A 78 GWNNPDIYDETIKVYLTIIDGVKKAGVNRFLMVGGAG 114 (227)
T ss_dssp ------CCSHHHHHHHHHHHHHHHTTCSEEEEECCST
T ss_pred CCCChhHHHHHHHHHHHHHHHHHHhCCCEEEEeCChh
Confidence 3 123445555554 4898887643
|
| >3e03_A Short chain dehydrogenase; structural genomics, PSI-2, protein structure initiative, NEW YORK structural genomix research consortium; 1.69A {Xanthomonas campestris PV} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00047 Score=58.87 Aligned_cols=80 Identities=26% Similarity=0.284 Sum_probs=52.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-------HHHHHH---HcCCC---eeEecCCchhHHHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-------IDLLKN---KFGFD---EAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-------~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~ 218 (342)
.+.++||+|+++++|.+.++.+...|++|++++++.++ .+.+.+ ..+.. ...|..+..++.+.+.+.
T Consensus 5 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~ 84 (274)
T 3e03_A 5 SGKTLFITGASRGIGLAIALRAARDGANVAIAAKSAVANPKLPGTIHSAAAAVNAAGGQGLALKCDIREEDQVRAAVAAT 84 (274)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCSCCTTSCCCHHHHHHHHHHHTSEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCcEEEEECCCChHHHHHHHHHHHCCCEEEEEeccchhhhhhHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHHHHHHH
Confidence 46799999999999999999888899999999988643 222111 33432 123444442222222222
Q ss_pred CC--CCccEEEeCCC
Q 019332 219 FP--EGIDIYFENVG 231 (342)
Q Consensus 219 ~~--~~~d~vid~~g 231 (342)
.. +++|++++++|
T Consensus 85 ~~~~g~iD~lvnnAG 99 (274)
T 3e03_A 85 VDTFGGIDILVNNAS 99 (274)
T ss_dssp HHHHSCCCEEEECCC
T ss_pred HHHcCCCCEEEECCC
Confidence 11 36999999998
|
| >1e7w_A Pteridine reductase; dihydrofolate reductase, shortchain dehydrogenase, methotrexate resistance, oxidoreductase; HET: NDP MTX; 1.75A {Leishmania major} SCOP: c.2.1.2 PDB: 1w0c_A* 1e92_A* 2bf7_A* 2bfa_A* 2bfm_A* 2bfo_A* 2bfp_A* 2p8k_A* 3h4v_A* 2xox_A 1p33_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00052 Score=59.13 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=37.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLK 194 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~ 194 (342)
.+.++||+|++|++|.+.++.+...|++|++++ ++.++.+.+.
T Consensus 8 ~~k~~lVTGas~GIG~aia~~la~~G~~V~~~~~r~~~~~~~~~ 51 (291)
T 1e7w_A 8 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 51 (291)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred CCCEEEEECCCchHHHHHHHHHHHCCCeEEEEcCCCHHHHHHHH
Confidence 467899999999999999999988999999999 8887765554
|
| >1gz6_A Estradiol 17 beta-dehydrogenase 4; 17BETA-HSD4, MFE-2, beta-oxidation, peroxisome, SDR, steroid biosynthesis, oxidoreductase, NADP; HET: NAI; 2.38A {Rattus norvegicus} SCOP: c.2.1.2 PDB: 1zbq_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00054 Score=59.91 Aligned_cols=79 Identities=22% Similarity=0.266 Sum_probs=53.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe---------CChhhHHHHHHH---cCCCeeEecCCchhH---HHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA---------GSKDKIDLLKNK---FGFDEAFNYKEEPDL---NEALK 216 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~---------~s~~~~~~~~~~---~g~~~v~~~~~~~~~---~~~i~ 216 (342)
.+.++||+||+|++|.++++.+...|++|++++ ++.++.+.+.++ .+...+.|..+..++ .+.+.
T Consensus 8 ~gk~~lVTGas~GIG~~~a~~La~~Ga~Vv~~~~~~~~~~~~R~~~~~~~~~~~l~~~~~~~~~D~~~~~~~~~~~~~~~ 87 (319)
T 1gz6_A 8 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 87 (319)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCCcccccccCCHHHHHHHHHHHHhhCCeEEEeCCCHHHHHHHHHHHH
Confidence 467999999999999999998888999999864 345554433222 343334566654233 23333
Q ss_pred HHCCCCccEEEeCCC
Q 019332 217 RYFPEGIDIYFENVG 231 (342)
Q Consensus 217 ~~~~~~~d~vid~~g 231 (342)
+.. +++|++++++|
T Consensus 88 ~~~-g~iD~lVnnAG 101 (319)
T 1gz6_A 88 DTF-GRIDVVVNNAG 101 (319)
T ss_dssp HHT-SCCCEEEECCC
T ss_pred HHc-CCCCEEEECCC
Confidence 332 36999999988
|
| >4dmm_A 3-oxoacyl-[acyl-carrier-protein] reductase; rossmann fold, oxoacyl-ACP reductase, NADP binding, fatty AC biosynthsis, oxidoreductase; HET: NAP; 2.38A {Synechococcus elongatus} PDB: 4dml_A* | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00037 Score=59.38 Aligned_cols=81 Identities=15% Similarity=0.182 Sum_probs=52.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.+ +.+.. . ..|..+..++.+.+.+... ++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~~~v~~~~~~~~~~~g~ 106 (269)
T 4dmm_A 27 TDRIALVTGASRGIGRAIALELAAAGAKVAVNYASSAGAADEVVAAIAAAGGEAFAVKADVSQESEVEALFAAVIERWGR 106 (269)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCChHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 4689999999999999999988889999999887 5544443332 23332 1 2344443122222222211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 107 id~lv~nAg~ 116 (269)
T 4dmm_A 107 LDVLVNNAGI 116 (269)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >3oml_A GH14720P, peroxisomal multifunctional enzyme type 2, CG3415; rossmann fold, hot-DOG fold, hydratase 2 motif, peroxisomes, oxidoreductase; 2.15A {Drosophila melanogaster} | Back alignment and structure |
|---|
Probab=97.40 E-value=0.00066 Score=64.89 Aligned_cols=81 Identities=20% Similarity=0.259 Sum_probs=48.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---------ChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---------SKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---------s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
.|.++||+||++++|.+.++.+...|++|+++++ +.++.+.+.+ +.+...+.|..+..+..+.+++..
T Consensus 18 ~gk~~lVTGas~GIG~aiA~~La~~Ga~Vv~~~r~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~D~~d~~~~~~~~~~~~ 97 (613)
T 3oml_A 18 DGRVAVVTGAGAGLGREYALLFAERGAKVVVNDLGGTHSGDGASQRAADIVVDEIRKAGGEAVADYNSVIDGAKVIETAI 97 (613)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEC--------------CHHHHHHHHHHTTCCEEECCCCGGGHHHHHC---
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcccccccCCHHHHHHHHHHHHHhCCeEEEEeCCHHHHHHHHHHHH
Confidence 4689999999999999999888888999999876 4444333321 334444556655423333333332
Q ss_pred C--CCccEEEeCCCh
Q 019332 220 P--EGIDIYFENVGG 232 (342)
Q Consensus 220 ~--~~~d~vid~~g~ 232 (342)
. +.+|++++++|.
T Consensus 98 ~~~g~iDiLVnnAGi 112 (613)
T 3oml_A 98 KAFGRVDILVNNAGI 112 (613)
T ss_dssp -------CEECCCCC
T ss_pred HHCCCCcEEEECCCC
Confidence 2 369999999983
|
| >3s55_A Putative short-chain dehydrogenase/reductase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 2.10A {Mycobacterium abscessus} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.39 E-value=0.00067 Score=58.08 Aligned_cols=79 Identities=19% Similarity=0.250 Sum_probs=52.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC------------hhhHHHHHH---HcCCCe---eEecCCchhHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKIDLLKN---KFGFDE---AFNYKEEPDLNE 213 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~ 213 (342)
.+.++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ +.+... ..|..+..++.+
T Consensus 9 ~~k~~lVTGas~gIG~a~a~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 88 (281)
T 3s55_A 9 EGKTALITGGARGMGRSHAVALAEAGADIAICDRCENSDVVGYPLATADDLAETVALVEKTGRRCISAKVDVKDRAALES 88 (281)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCSSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCeEEEEeCCccccccccccccHHHHHHHHHHHHhcCCeEEEEeCCCCCHHHHHH
Confidence 46899999999999999999999999999999986 333332221 334321 234444312222
Q ss_pred ---HHHHHCCCCccEEEeCCC
Q 019332 214 ---ALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 214 ---~i~~~~~~~~d~vid~~g 231 (342)
++.+.. +++|++++++|
T Consensus 89 ~~~~~~~~~-g~id~lv~nAg 108 (281)
T 3s55_A 89 FVAEAEDTL-GGIDIAITNAG 108 (281)
T ss_dssp HHHHHHHHH-TCCCEEEECCC
T ss_pred HHHHHHHhc-CCCCEEEECCC
Confidence 232222 36999999998
|
| >2nm0_A Probable 3-oxacyl-(acyl-carrier-protein) reductas; oxidoreductase; 1.99A {Streptomyces coelicolor} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00032 Score=59.19 Aligned_cols=75 Identities=13% Similarity=0.155 Sum_probs=50.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHC--CCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYF--PEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~--~~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|+++++++++.+. +. ...|..+..++.+.+.+.. .+.+|++++
T Consensus 20 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~------~~~~~~Dl~d~~~v~~~~~~~~~~~g~iD~lv~ 93 (253)
T 2nm0_A 20 MSRSVLVTGGNRGIGLAIARAFADAGDKVAITYRSGEPPEG------FLAVKCDITDTEQVEQAYKEIEETHGPVEVLIA 93 (253)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTT------SEEEECCTTSHHHHHHHHHHHHHHTCSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHhhcc------ceEEEecCCCHHHHHHHHHHHHHHcCCCCEEEE
Confidence 36789999999999999999888899999999987654321 11 1234444312322232221 236999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 94 nAg~ 97 (253)
T 2nm0_A 94 NAGV 97 (253)
T ss_dssp ECSC
T ss_pred CCCC
Confidence 8873
|
| >1lu9_A Methylene tetrahydromethanopterin dehydrogenase; alpha/beta twisted open sheet structure, oxidoreductase; 1.90A {Methylobacterium extorquens} SCOP: c.2.1.7 c.58.1.4 PDB: 1lua_A* | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0018 Score=55.70 Aligned_cols=77 Identities=17% Similarity=0.154 Sum_probs=55.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-eeEecCCchhHHHHHHHHCCCCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-EAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
-++.++||+|++|++|.+++..+...|++|+++.++.++.+.+.+++ +.. ...|..+. + .+.+... .+|+
T Consensus 117 l~gk~vlVtGaaGGiG~aia~~L~~~G~~V~i~~R~~~~~~~l~~~~~~~~~~~~~~~D~~~~-~---~~~~~~~-~~Dv 191 (287)
T 1lu9_A 117 VKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD-A---SRAEAVK-GAHF 191 (287)
T ss_dssp CTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH-H---HHHHHTT-TCSE
T ss_pred CCCCEEEEECCCcHHHHHHHHHHHHCcCEEEEEECCHHHHHHHHHHHHhcCCcEEEEecCCCH-H---HHHHHHH-hCCE
Confidence 36789999999999999999999999999999999988766554333 322 22454443 2 3333332 3899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 192 lVn~ag~ 198 (287)
T 1lu9_A 192 VFTAGAI 198 (287)
T ss_dssp EEECCCT
T ss_pred EEECCCc
Confidence 9999973
|
| >4iin_A 3-ketoacyl-acyl carrier protein reductase (FABG); structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 2.40A {Helicobacter pylori} PDB: 4ijk_A | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00051 Score=58.49 Aligned_cols=81 Identities=27% Similarity=0.388 Sum_probs=52.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHH---HcCCC-ee--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKN---KFGFD-EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~---~~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|++++++ ++..+.+.+ +.+.. .+ .|..+..++.+.+.+.. .++
T Consensus 28 ~~k~vlITGas~gIG~~la~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 107 (271)
T 4iin_A 28 TGKNVLITGASKGIGAEIAKTLASMGLKVWINYRSNAEVADALKNELEEKGYKAAVIKFDAASESDFIEAIQTIVQSDGG 107 (271)
T ss_dssp SCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHHHHHHHHHhcCC
Confidence 56899999999999999998888899999999984 433333321 33432 12 24444322333333222 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 108 id~li~nAg~ 117 (271)
T 4iin_A 108 LSYLVNNAGV 117 (271)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCc
Confidence 9999999983
|
| >1ja9_A 4HNR, 1,3,6,8-tetrahydroxynaphthalene reductase; protein-NADPH-active site inhibitor complex, oxidoreductase, chain dehydrogenase; HET: NDP PYQ; 1.50A {Magnaporthe grisea} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00054 Score=58.27 Aligned_cols=80 Identities=16% Similarity=0.244 Sum_probs=53.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++++ +.++.+.+.++ .+.. . ..|..+...+.+.+++.. .++
T Consensus 20 ~~k~vlItGasggiG~~la~~l~~~G~~v~~~~r~~~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 99 (274)
T 1ja9_A 20 AGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHFGG 99 (274)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHHcCC
Confidence 4678999999999999999998889999999998 66655443322 3432 1 234444312333333221 136
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 100 ~d~vi~~Ag 108 (274)
T 1ja9_A 100 LDFVMSNSG 108 (274)
T ss_dssp EEEEECCCC
T ss_pred CCEEEECCC
Confidence 999999987
|
| >3fwz_A Inner membrane protein YBAL; TRKA-N domain, E.coli, structural genomics, PSI-2, Pro structure initiative; HET: MSE AMP; 1.79A {Escherichia coli k-12} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0026 Score=48.16 Aligned_cols=93 Identities=16% Similarity=0.116 Sum_probs=65.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-ecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-NYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.++|+|.|. |.+|..+++.++..|.+|+++++++++.+.++ +.|...+. |..+ .+.+++..-..+|.++-+.+
T Consensus 7 ~~~viIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~~~-~~g~~~i~gd~~~----~~~l~~a~i~~ad~vi~~~~ 80 (140)
T 3fwz_A 7 CNHALLVGY-GRVGSLLGEKLLASDIPLVVIETSRTRVDELR-ERGVRAVLGNAAN----EEIMQLAHLECAKWLILTIP 80 (140)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEESCTTS----HHHHHHTTGGGCSEEEECCS
T ss_pred CCCEEEECc-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-HcCCCEEECCCCC----HHHHHhcCcccCCEEEEECC
Confidence 467999997 99999999999999999999999999999888 77874332 2222 22344332236999999999
Q ss_pred hhhHH----HHHHhhhhCCEEEEE
Q 019332 232 GKMLD----AVLLNMKIHGRIAVC 251 (342)
Q Consensus 232 ~~~~~----~~~~~l~~~G~~v~~ 251 (342)
.+... ...+.+.+..+++..
T Consensus 81 ~~~~n~~~~~~a~~~~~~~~iiar 104 (140)
T 3fwz_A 81 NGYEAGEIVASARAKNPDIEIIAR 104 (140)
T ss_dssp CHHHHHHHHHHHHHHCSSSEEEEE
T ss_pred ChHHHHHHHHHHHHHCCCCeEEEE
Confidence 74222 233445556676653
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=97.38 E-value=0.0011 Score=63.23 Aligned_cols=104 Identities=21% Similarity=0.253 Sum_probs=66.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh---------hhHHHHHH---HcCCCeeEecCCchh---HHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK---------DKIDLLKN---KFGFDEAFNYKEEPD---LNEALK 216 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~---------~~~~~~~~---~~g~~~v~~~~~~~~---~~~~i~ 216 (342)
.+.++||+||++|+|.+.++.+...|++|++.+++. ++.+.+.+ +.|...+.|..+..+ +.+.+.
T Consensus 7 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~gr~~~~~~~~~~~i~~~g~~~~~d~~d~~~~~~~v~~~~ 86 (604)
T 2et6_A 7 KDKVVIITGAGGGLGKYYSLEFAKLGAKVVVNDLGGALNGQGGNSKAADVVVDEIVKNGGVAVADYNNVLDGDKIVETAV 86 (604)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECC-----------CHHHHHHHHHHHTTCEEEEECCCTTCHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHcCCEEEEEeCCccccccccchHHHHHHHHHHHhcCCeEEEEcCCHHHHHHHHHHHH
Confidence 467899999999999999999999999999987643 33333221 234433455544312 333333
Q ss_pred HHCCCCccEEEeCCCh-h-------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 217 RYFPEGIDIYFENVGG-K-------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~-~-------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
+.. |.+|++++++|. . ....+++.|+. +|++|.+++..+
T Consensus 87 ~~~-G~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~a~~p~m~~~~~G~IVnisS~ag 153 (604)
T 2et6_A 87 KNF-GTVHVIINNAGILRDASMKKMTEKDYKLVIDVHLNGAFAVTKAAWPYFQKQKYGRIVNTSSPAG 153 (604)
T ss_dssp HHH-SCCCEEEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHc-CCCCEEEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECCHHH
Confidence 322 469999999983 1 12345555643 589999987544
|
| >2bd0_A Sepiapterin reductase; oxidoreductase; HET: NAP BIO; 1.70A {Chlorobium tepidum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.38 E-value=0.00056 Score=57.12 Aligned_cols=79 Identities=14% Similarity=0.171 Sum_probs=53.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC-------EEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC-------YVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga-------~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~ 219 (342)
+.++||+||+|++|.+.++.+...|+ +|+++++++++.+.+.+++ +.. . ..|..+...+.+.+.+..
T Consensus 2 ~k~vlITGasggiG~~la~~l~~~G~~~~~~~~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~ 81 (244)
T 2bd0_A 2 KHILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIV 81 (244)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHH
T ss_pred CCEEEEECCCChHHHHHHHHHHHhcCcccccceEEEEEeCCHHHHHHHHHHHHccCCeeeEEEecCCCHHHHHHHHHHHH
Confidence 46899999999999998888888899 9999999987766554333 321 1 134444312222222221
Q ss_pred --CCCccEEEeCCC
Q 019332 220 --PEGIDIYFENVG 231 (342)
Q Consensus 220 --~~~~d~vid~~g 231 (342)
.+++|++++++|
T Consensus 82 ~~~g~id~li~~Ag 95 (244)
T 2bd0_A 82 ERYGHIDCLVNNAG 95 (244)
T ss_dssp HHTSCCSEEEECCC
T ss_pred HhCCCCCEEEEcCC
Confidence 136999999988
|
| >3t7c_A Carveol dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: NAD; 1.95A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00072 Score=58.52 Aligned_cols=80 Identities=15% Similarity=0.201 Sum_probs=52.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC------------hhhHHHHHH---HcCCCe---eEecCCchhHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKIDLLKN---KFGFDE---AFNYKEEPDLNE 213 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~ 213 (342)
.+.++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ ..+... ..|..+..++.+
T Consensus 27 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~ 106 (299)
T 3t7c_A 27 EGKVAFITGAARGQGRSHAITLAREGADIIAIDVCKQLDGVKLPMSTPDDLAETVRQVEALGRRIIASQVDVRDFDAMQA 106 (299)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEECCSCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEecccccccccccccCHHHHHHHHHHHHhcCCceEEEECCCCCHHHHHH
Confidence 46899999999999999999988999999999876 444433321 334321 234444422322
Q ss_pred HHHHHCC--CCccEEEeCCC
Q 019332 214 ALKRYFP--EGIDIYFENVG 231 (342)
Q Consensus 214 ~i~~~~~--~~~d~vid~~g 231 (342)
.+.+... +++|++++++|
T Consensus 107 ~~~~~~~~~g~iD~lv~nAg 126 (299)
T 3t7c_A 107 AVDDGVTQLGRLDIVLANAA 126 (299)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHhCCCCEEEECCC
Confidence 2332211 36999999988
|
| >3uf0_A Short-chain dehydrogenase/reductase SDR; gluconate, gluconate 5-dehydratase, NAD(P) dependent, enzyme initiative, EFI, oxidoreductase; HET: NAP; 2.00A {Beutenbergia cavernae} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0005 Score=58.69 Aligned_cols=79 Identities=13% Similarity=0.218 Sum_probs=51.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.+.++||+||++++|.+.++.+...|++|+++++++...+.+. ++ +.. . ..|..+. +-.+.+.+.. .+++
T Consensus 30 ~gk~~lVTGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~~~~g~i 107 (273)
T 3uf0_A 30 AGRTAVVTGAGSGIGRAIAHGYARAGAHVLAWGRTDGVKEVAD-EIADGGGSAEAVVADLADL-EGAANVAEELAATRRV 107 (273)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTHHHHHHH-HHHTTTCEEEEEECCTTCH-HHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEcCHHHHHHHHH-HHHhcCCcEEEEEecCCCH-HHHHHHHHHHHhcCCC
Confidence 4689999999999999999988889999999997654333333 33 321 1 2344443 2222222111 1469
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 108 D~lv~nAg~ 116 (273)
T 3uf0_A 108 DVLVNNAGI 116 (273)
T ss_dssp CEEEECCCC
T ss_pred cEEEECCCC
Confidence 999999883
|
| >3e9n_A Putative short-chain dehydrogenase/reductase; structural genomics, unknown function, oxidoreductase, PSI- 2; 2.40A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.37 E-value=0.0015 Score=54.66 Aligned_cols=75 Identities=11% Similarity=0.133 Sum_probs=48.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH-----HHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL-----KRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i-----~~~~~--~~~d 224 (342)
.+.++||+||+|++|.+.++.+.. |++|+++++++++.+.+. +......+.. |+.+.. .+... +++|
T Consensus 4 ~~k~vlITGas~gIG~~~a~~l~~-g~~v~~~~r~~~~~~~~~-~~~~~~~~~~----D~~~~~~~~~~~~~~~~~~~id 77 (245)
T 3e9n_A 4 KKKIAVVTGATGGMGIEIVKDLSR-DHIVYALGRNPEHLAALA-EIEGVEPIES----DIVKEVLEEGGVDKLKNLDHVD 77 (245)
T ss_dssp --CEEEEESTTSHHHHHHHHHHTT-TSEEEEEESCHHHHHHHH-TSTTEEEEEC----CHHHHHHTSSSCGGGTTCSCCS
T ss_pred CCCEEEEEcCCCHHHHHHHHHHhC-CCeEEEEeCCHHHHHHHH-hhcCCcceec----ccchHHHHHHHHHHHHhcCCCC
Confidence 367899999999999988877755 899999999988877776 4322122221 222221 11111 3699
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++++++|.
T Consensus 78 ~lv~~Ag~ 85 (245)
T 3e9n_A 78 TLVHAAAV 85 (245)
T ss_dssp EEEECC--
T ss_pred EEEECCCc
Confidence 99999984
|
| >4h15_A Short chain alcohol dehydrogenase-related dehydro; structural genomics, PSI-biology, nysgrc; HET: MSE; 1.45A {Sinorhizobium meliloti} PDB: 4h16_A* | Back alignment and structure |
|---|
Probab=97.37 E-value=0.00036 Score=59.09 Aligned_cols=75 Identities=19% Similarity=0.292 Sum_probs=50.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchh---HHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPD---LNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~---~~~~i~~~~~~~~d~vid 228 (342)
.|.++||+||++|||.+.++.+...|++|+++.+++++. ..+ .+ ....|-.+..+ +.+.+.+.. |++|++++
T Consensus 10 ~GK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~-~~~-~~--~~~~Dv~~~~~v~~~~~~~~~~~-G~iDilVn 84 (261)
T 4h15_A 10 RGKRALITAGTKGAGAATVSLFLELGAQVLTTARARPEG-LPE-EL--FVEADLTTKEGCAIVAEATRQRL-GGVDVIVH 84 (261)
T ss_dssp TTCEEEESCCSSHHHHHHHHHHHHTTCEEEEEESSCCTT-SCT-TT--EEECCTTSHHHHHHHHHHHHHHT-SSCSEEEE
T ss_pred CCCEEEEeccCcHHHHHHHHHHHHcCCEEEEEECCchhC-CCc-EE--EEEcCCCCHHHHHHHHHHHHHHc-CCCCEEEE
Confidence 678999999999999999999999999999999876431 111 11 11234444312 333333333 36999999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
++|
T Consensus 85 nAG 87 (261)
T 4h15_A 85 MLG 87 (261)
T ss_dssp CCC
T ss_pred CCC
Confidence 887
|
| >2wyu_A Enoyl-[acyl carrier protein] reductase; oxidoreductase, fatty acid biosynthesis, oxidation reduction; 1.50A {Thermus thermophilus} PDB: 1ulu_A 2wyv_A* 2wyw_A* 2yw9_A* | Back alignment and structure |
|---|
Probab=97.36 E-value=0.00079 Score=56.96 Aligned_cols=81 Identities=14% Similarity=0.167 Sum_probs=52.9
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHcCCCee--EecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+ |++|.+.++.+...|++|++++++++ ..+.+.++.+.... .|..+..++.+.+.+... ++
T Consensus 7 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 86 (261)
T 2wyu_A 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAFGG 86 (261)
T ss_dssp TTCEEEEESCCSSSSHHHHHHHHHHHHTCEEEEEESCGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHHSS
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHCCCEEEEEcCCHHHHHHHHHHHHhcCCcEEEECCCCCHHHHHHHHHHHHHHcCC
Confidence 46789999998 99999998888888999999998875 33333323342222 344443123222322211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 87 iD~lv~~Ag~ 96 (261)
T 2wyu_A 87 LDYLVHAIAF 96 (261)
T ss_dssp EEEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >2qhx_A Pteridine reductase 1; oxidoreductase, short-chain dehydrogenase/reductase, trypanosomatid, pterin salvage, drug resistance; HET: NAP FE1; 2.61A {Leishmania major} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.35 E-value=0.00061 Score=59.80 Aligned_cols=43 Identities=14% Similarity=0.118 Sum_probs=37.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLK 194 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~ 194 (342)
.+.++||+||+|++|.++++.+...|++|++++ +++++.+.+.
T Consensus 45 ~~k~~lVTGas~GIG~aia~~La~~G~~Vv~~~~r~~~~~~~~~ 88 (328)
T 2qhx_A 45 TVPVALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 88 (328)
T ss_dssp CCCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEcCCCHHHHHHHH
Confidence 467899999999999999999989999999999 8887766554
|
| >1hdo_A Biliverdin IX beta reductase; foetal metabolism, HAEM degradation, flavin reductase, diaphorase, green HAEM binding protein; HET: NAP; 1.15A {Homo sapiens} SCOP: c.2.1.2 PDB: 1he2_A* 1he3_A* 1he4_A* 1he5_A* | Back alignment and structure |
|---|
Probab=97.35 E-value=0.0005 Score=55.59 Aligned_cols=96 Identities=14% Similarity=0.077 Sum_probs=62.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
.+|||+||+|.+|..+++.+...|.+|+++++++++.+.+. ..+... ..|..+. +.+.+... ++|++|+++|.
T Consensus 4 ~~ilVtGatG~iG~~l~~~l~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~~~----~~~~~~~~-~~d~vi~~a~~ 77 (206)
T 1hdo_A 4 KKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQA----ADVDKTVA-GQDAVIVLLGT 77 (206)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSH----HHHHHHHT-TCSEEEECCCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCCCeEEEEEeChhhccccc-CCceEEEEecCCCH----HHHHHHHc-CCCEEEECccC
Confidence 58999999999999999998888999999999877643211 112211 1233332 23333332 48999999985
Q ss_pred -h----------hHHHHHHhhhh--CCEEEEEceec
Q 019332 233 -K----------MLDAVLLNMKI--HGRIAVCGMIS 255 (342)
Q Consensus 233 -~----------~~~~~~~~l~~--~G~~v~~g~~~ 255 (342)
. ....+++.++. .++++.+++..
T Consensus 78 ~~~~~~~~~n~~~~~~~~~~~~~~~~~~~v~~Ss~~ 113 (206)
T 1hdo_A 78 RNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSAF 113 (206)
T ss_dssp TTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCGG
T ss_pred CCCCCccchHHHHHHHHHHHHHHhCCCeEEEEeeee
Confidence 2 13344444443 35888887654
|
| >3ek2_A Enoyl-(acyl-carrier-protein) reductase (NADH); ssgcid, oxidoreductase, structural genomics; 1.90A {Burkholderia pseudomallei 1710B} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00058 Score=57.98 Aligned_cols=82 Identities=12% Similarity=0.201 Sum_probs=54.7
Q ss_pred CCCCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH---HHcCCCe--eEecCCchhHH---HHHHHHC
Q 019332 150 PKQGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK---NKFGFDE--AFNYKEEPDLN---EALKRYF 219 (342)
Q Consensus 150 ~~~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~---~~~g~~~--v~~~~~~~~~~---~~i~~~~ 219 (342)
...+.++||+||+ +++|.+.++.+...|++|++++++++..+.++ ++.+... ..|..+..++. +.+.+..
T Consensus 11 ~~~~k~vlITGa~~~~giG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 90 (271)
T 3ek2_A 11 FLDGKRILLTGLLSNRSIAYGIAKACKREGAELAFTYVGDRFKDRITEFAAEFGSELVFPCDVADDAQIDALFASLKTHW 90 (271)
T ss_dssp TTTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHC
T ss_pred ccCCCEEEEeCCCCCCcHHHHHHHHHHHcCCCEEEEecchhhHHHHHHHHHHcCCcEEEECCCCCHHHHHHHHHHHHHHc
Confidence 3567899999998 99999999988889999999998865433333 1334322 23444432222 3333332
Q ss_pred CCCccEEEeCCCh
Q 019332 220 PEGIDIYFENVGG 232 (342)
Q Consensus 220 ~~~~d~vid~~g~ 232 (342)
+++|++++++|.
T Consensus 91 -g~id~lv~nAg~ 102 (271)
T 3ek2_A 91 -DSLDGLVHSIGF 102 (271)
T ss_dssp -SCEEEEEECCCC
T ss_pred -CCCCEEEECCcc
Confidence 369999999873
|
| >3u9l_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.10A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.34 E-value=0.00066 Score=59.50 Aligned_cols=79 Identities=18% Similarity=0.323 Sum_probs=51.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-----hhhHHHHHH---HcCCC-e--eEecCCchhHHHHHHHHCC-
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-----KDKIDLLKN---KFGFD-E--AFNYKEEPDLNEALKRYFP- 220 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-----~~~~~~~~~---~~g~~-~--v~~~~~~~~~~~~i~~~~~- 220 (342)
+.++||+||+|++|.+.++.+...|++|++++++ .++.+.+.+ ..+.. . .+|..+...+.+.+.+...
T Consensus 5 ~k~vlVTGas~GIG~aia~~L~~~G~~V~~~~r~~~~r~~~~~~~l~~~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~ 84 (324)
T 3u9l_A 5 KKIILITGASSGFGRLTAEALAGAGHRVYASMRDIVGRNASNVEAIAGFARDNDVDLRTLELDVQSQVSVDRAIDQIIGE 84 (324)
T ss_dssp CCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCTTTTTHHHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHH
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCEEEEecCcccccCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHH
Confidence 5789999999999999999999999999998875 233333321 23432 1 2344443233333333221
Q ss_pred -CCccEEEeCCC
Q 019332 221 -EGIDIYFENVG 231 (342)
Q Consensus 221 -~~~d~vid~~g 231 (342)
|++|++++++|
T Consensus 85 ~g~iD~lVnnAG 96 (324)
T 3u9l_A 85 DGRIDVLIHNAG 96 (324)
T ss_dssp HSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 36999999998
|
| >3ruf_A WBGU; rossmann fold, UDP-hexose 4-epimerase, isomerase; HET: NAD UDP; 2.00A {Plesiomonas shigelloides} SCOP: c.2.1.2 PDB: 3ru9_A* 3rud_A* 3rue_A* 3rua_A* 3ruh_A* 3ruc_A* 3ru7_A* 3lu1_A* | Back alignment and structure |
|---|
Probab=97.32 E-value=0.0042 Score=54.72 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=62.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh----hHHHHHHHc-------CCCe-eEecCCchhHHHHHHHHCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD----KIDLLKNKF-------GFDE-AFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~----~~~~~~~~~-------g~~~-v~~~~~~~~~~~~i~~~~~ 220 (342)
+.+|||+||+|.+|..+++.+...|.+|++++++.. ..+.+. .. +... ..|..+. +.+.+...
T Consensus 25 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~ 99 (351)
T 3ruf_A 25 PKTWLITGVAGFIGSNLLEKLLKLNQVVIGLDNFSTGHQYNLDEVK-TLVSTEQWSRFCFIEGDIRDL----TTCEQVMK 99 (351)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHH-HTSCHHHHTTEEEEECCTTCH----HHHHHHTT
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCCCchhhhhhhh-hccccccCCceEEEEccCCCH----HHHHHHhc
Confidence 578999999999999999999889999999998543 223333 21 2211 1233332 34444444
Q ss_pred CCccEEEeCCChhh------------------HHHHHHhhhhC--CEEEEEceec
Q 019332 221 EGIDIYFENVGGKM------------------LDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 221 ~~~d~vid~~g~~~------------------~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
++|+||++++... ...+++.++.. +++|.+++..
T Consensus 100 -~~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~~ 153 (351)
T 3ruf_A 100 -GVDHVLHQAALGSVPRSIVDPITTNATNITGFLNILHAAKNAQVQSFTYAASSS 153 (351)
T ss_dssp -TCSEEEECCCCCCHHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred -CCCEEEECCccCCcchhhhCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEecHH
Confidence 5999999998410 12244455544 4888887643
|
| >3llv_A Exopolyphosphatase-related protein; NAD(P)-binding, rossmann, PSI, M structural genomics; 1.70A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=97.30 E-value=0.0024 Score=48.30 Aligned_cols=75 Identities=20% Similarity=0.188 Sum_probs=56.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
..+++|.|+ |.+|..+++.+...|.+|+++++++++.+.++ +.+...+ .|..+ .+.+++..-.++|.++.+.+
T Consensus 6 ~~~v~I~G~-G~iG~~la~~L~~~g~~V~~id~~~~~~~~~~-~~~~~~~~gd~~~----~~~l~~~~~~~~d~vi~~~~ 79 (141)
T 3llv_A 6 RYEYIVIGS-EAAGVGLVRELTAAGKKVLAVDKSKEKIELLE-DEGFDAVIADPTD----ESFYRSLDLEGVSAVLITGS 79 (141)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESCHHHHHHHH-HTTCEEEECCTTC----HHHHHHSCCTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HCCCcEEECCCCC----HHHHHhCCcccCCEEEEecC
Confidence 357999997 99999999999999999999999999988887 6676322 23333 23344442237999999999
Q ss_pred hh
Q 019332 232 GK 233 (342)
Q Consensus 232 ~~ 233 (342)
..
T Consensus 80 ~~ 81 (141)
T 3llv_A 80 DD 81 (141)
T ss_dssp CH
T ss_pred CH
Confidence 73
|
| >1yo6_A Putative carbonyl reductase sniffer; tyrosine-dependent oxidoreductase (SDR family), structural genomics, PSI; 2.60A {Caenorhabditis elegans} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00056 Score=57.19 Aligned_cols=79 Identities=15% Similarity=0.177 Sum_probs=54.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHHc-CCC-e--eEecCCchhHH---HHHHHHCCC-C
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNKF-GFD-E--AFNYKEEPDLN---EALKRYFPE-G 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~~-g~~-~--v~~~~~~~~~~---~~i~~~~~~-~ 222 (342)
+.++||+||+|++|.++++.+...| ++|++++++.++.+.+. ++ +.. . ..|..+...+. +.+.+..+. +
T Consensus 3 ~k~vlItGasggiG~~la~~l~~~g~~~~V~~~~r~~~~~~~l~-~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~g~~~ 81 (250)
T 1yo6_A 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELK-SIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDG 81 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHH-TCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGC
T ss_pred CCEEEEecCCchHHHHHHHHHHhcCCCcEEEEEecCHHHHHHHH-hccCCceEEEEeecCCHHHHHHHHHHHHHhcCCCC
Confidence 5789999999999999999888889 99999999988777666 44 221 1 23444431222 223222221 5
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++|+++|.
T Consensus 82 id~li~~Ag~ 91 (250)
T 1yo6_A 82 LSLLINNAGV 91 (250)
T ss_dssp CCEEEECCCC
T ss_pred CcEEEECCcc
Confidence 9999999874
|
| >3nrc_A Enoyl-[acyl-carrier-protein] reductase (NADH); rossmann fold, NADH BI oxidoreductase; HET: NAD TCL; 2.10A {Francisella tularensis subsp} PDB: 3uic_A* 2jjy_A* | Back alignment and structure |
|---|
Probab=97.29 E-value=0.0008 Score=57.58 Aligned_cols=81 Identities=11% Similarity=0.207 Sum_probs=54.4
Q ss_pred CCCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCCh--hhHHHHHHHcCCCee--EecCCchhHH---HHHHHHCCC
Q 019332 151 KQGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSK--DKIDLLKNKFGFDEA--FNYKEEPDLN---EALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~--~~~~~~~~~~g~~~v--~~~~~~~~~~---~~i~~~~~~ 221 (342)
-.+.++||+||+ +|+|.+.++.+...|++|++++++. +..+.+.++.+.... .|..+..++. +.+.+.. +
T Consensus 24 l~~k~vlVTGasg~~GIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g 102 (280)
T 3nrc_A 24 LAGKKILITGLLSNKSIAYGIAKAMHREGAELAFTYVGQFKDRVEKLCAEFNPAAVLPCDVISDQEIKDLFVELGKVW-D 102 (280)
T ss_dssp TTTCEEEECCCCSTTCHHHHHHHHHHHTTCEEEEEECTTCHHHHHHHHGGGCCSEEEECCTTCHHHHHHHHHHHHHHC-S
T ss_pred cCCCEEEEECCCCCCCHHHHHHHHHHHcCCEEEEeeCchHHHHHHHHHHhcCCceEEEeecCCHHHHHHHHHHHHHHc-C
Confidence 356899999998 6699999988888999999999887 555555424443222 3444431222 3333332 3
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++++|.
T Consensus 103 ~id~li~nAg~ 113 (280)
T 3nrc_A 103 GLDAIVHSIAF 113 (280)
T ss_dssp SCCEEEECCCC
T ss_pred CCCEEEECCcc
Confidence 69999999883
|
| >2p91_A Enoyl-[acyl-carrier-protein] reductase [NADH]; NADH-dependent enoyl-ACP reductase, FABI, aquifex A VF5, structural genomics, PSI; 2.00A {Aquifex aeolicus} | Back alignment and structure |
|---|
Probab=97.29 E-value=0.00089 Score=57.43 Aligned_cols=80 Identities=13% Similarity=0.235 Sum_probs=53.0
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChh---hHHHHHHHcCCCe--eEecCCchhHHH---HHHHHCCC
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKD---KIDLLKNKFGFDE--AFNYKEEPDLNE---ALKRYFPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~---~~~~~~~~~g~~~--v~~~~~~~~~~~---~i~~~~~~ 221 (342)
.+.++||+||+ |++|.+.++.+...|++|++++++++ ..+.+.++.+... ..|..+..++.+ .+.+.. +
T Consensus 20 ~~k~vlVTGas~~~gIG~~ia~~l~~~G~~V~~~~r~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~-g 98 (285)
T 2p91_A 20 EGKRALITGVANERSIAYGIAKSFHREGAQLAFTYATPKLEKRVREIAKGFGSDLVVKCDVSLDEDIKNLKKFLEENW-G 98 (285)
T ss_dssp TTCEEEECCCSSTTSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-S
T ss_pred CCCEEEEECCCCCCcHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHhcCCeEEEEcCCCCHHHHHHHHHHHHHHc-C
Confidence 46799999998 89999999988888999999998875 3333332334212 234444312222 222222 3
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|++++++|.
T Consensus 99 ~iD~lv~~Ag~ 109 (285)
T 2p91_A 99 SLDIIVHSIAY 109 (285)
T ss_dssp CCCEEEECCCC
T ss_pred CCCEEEECCCC
Confidence 69999999873
|
| >3oec_A Carveol dehydrogenase (mytha.01326.C, A0R518 HOMO; ssgcid, structural genomics; 1.95A {Mycobacterium thermoresistibile} | Back alignment and structure |
|---|
Probab=97.28 E-value=0.00094 Score=58.31 Aligned_cols=80 Identities=20% Similarity=0.242 Sum_probs=52.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC------------hhhHHHHHH---HcCCCe---eEecCCchhHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS------------KDKIDLLKN---KFGFDE---AFNYKEEPDLNE 213 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s------------~~~~~~~~~---~~g~~~---v~~~~~~~~~~~ 213 (342)
.+.++||+||++++|.++++.+...|++|++++++ .++.+.+.+ +.+... ..|..+..++.+
T Consensus 45 ~gk~~lVTGas~GIG~aia~~la~~G~~Vv~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~ 124 (317)
T 3oec_A 45 QGKVAFITGAARGQGRTHAVRLAQDGADIVAIDLCRQQPNLDYAQGSPEELKETVRLVEEQGRRIIARQADVRDLASLQA 124 (317)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECCCCCTTCCSCCCCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCeEEEEecccccccccccccCHHHHHHHHHHHHhcCCeEEEEECCCCCHHHHHH
Confidence 56899999999999999999998999999998765 343333221 334321 234444322333
Q ss_pred HHHHHCC--CCccEEEeCCC
Q 019332 214 ALKRYFP--EGIDIYFENVG 231 (342)
Q Consensus 214 ~i~~~~~--~~~d~vid~~g 231 (342)
.+.+... +++|++++++|
T Consensus 125 ~~~~~~~~~g~iD~lVnnAg 144 (317)
T 3oec_A 125 VVDEALAEFGHIDILVSNVG 144 (317)
T ss_dssp HHHHHHHHHSCCCEEEECCC
T ss_pred HHHHHHHHcCCCCEEEECCC
Confidence 3332211 36999999998
|
| >3s8m_A Enoyl-ACP reductase; rossmann fold, oxidoreductase, NADH binding, fatty acid SYNT enoyl-ACP; 1.60A {Xanthomonas oryzae PV} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.0019 Score=58.09 Aligned_cols=84 Identities=15% Similarity=0.108 Sum_probs=56.1
Q ss_pred cCC-CCCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChhhH----------------HHHHHHcCCCe-e--EecC
Q 019332 148 CSP-KQGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKI----------------DLLKNKFGFDE-A--FNYK 206 (342)
Q Consensus 148 ~~~-~~~~~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~~~----------------~~~~~~~g~~~-v--~~~~ 206 (342)
+.+ +.+.++||+||++|+|++.+..+.. .|++|+++.++.++. +.++ +.|... . .|-.
T Consensus 55 ~~~~~~gKvaLVTGASsGIG~AiA~~LA~~~GA~Vv~~~r~~~~~~~~~~~ag~~n~~a~~~~~~-~~G~~a~~i~~Dvt 133 (422)
T 3s8m_A 55 GVRNDGPKKVLVIGASSGYGLASRITAAFGFGADTLGVFFEKPGTASKAGTAGWYNSAAFDKHAK-AAGLYSKSINGDAF 133 (422)
T ss_dssp CCCSSSCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred cccccCCCEEEEECCChHHHHHHHHHHHHhCCCEEEEEeCCchhhhhhhcccccchhHHHHHHHH-hcCCcEEEEEecCC
Confidence 455 4678999999999999988777777 899999998765321 3344 556532 1 2333
Q ss_pred Cch---hHHHHHHHHCCCCccEEEeCCCh
Q 019332 207 EEP---DLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 207 ~~~---~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+.. .+.+.+.+..+|++|++++++|.
T Consensus 134 d~~~v~~~v~~i~~~~~G~IDiLVNNAG~ 162 (422)
T 3s8m_A 134 SDAARAQVIELIKTEMGGQVDLVVYSLAS 162 (422)
T ss_dssp SHHHHHHHHHHHHHHSCSCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHcCCCCCEEEEcCcc
Confidence 331 23444555543579999998875
|
| >3vtz_A Glucose 1-dehydrogenase; rossmann fold, oxidoreductase, NAD binding; 2.30A {Thermoplasma volcanium} | Back alignment and structure |
|---|
Probab=97.27 E-value=0.00032 Score=59.73 Aligned_cols=78 Identities=19% Similarity=0.185 Sum_probs=51.6
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCC--CCccEE
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
-..+.++||+||++++|.+.++.+...|++|+++++++++.. . ... ...|..+..++.+.+.+... +++|++
T Consensus 11 ~~~~k~vlVTGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~----~-~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD~l 85 (269)
T 3vtz_A 11 EFTDKVAIVTGGSSGIGLAVVDALVRYGAKVVSVSLDEKSDV----N-VSDHFKIDVTNEEEVKEAVEKTTKKYGRIDIL 85 (269)
T ss_dssp TTTTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCC--CT----T-SSEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCchhcc----C-ceeEEEecCCCHHHHHHHHHHHHHHcCCCCEE
Confidence 456889999999999999999988889999999998765421 1 111 12344444223332322211 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 86 v~nAg~ 91 (269)
T 3vtz_A 86 VNNAGI 91 (269)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999983
|
| >3osu_A 3-oxoacyl-[acyl-carrier-protein] reductase; structural genomics, csgid, center for structural genomics O infectious diseases; 1.90A {Staphylococcus aureus subsp} SCOP: c.2.1.0 PDB: 3sj7_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00071 Score=56.70 Aligned_cols=81 Identities=19% Similarity=0.274 Sum_probs=52.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++.+ +.++.+.+.+ +.+... ..|..+..++.+.+.+... ++
T Consensus 3 ~~k~~lVTGas~gIG~~ia~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~ 82 (246)
T 3osu_A 3 MTKSALVTGASRGIGRSIALQLAEEGYNVAVNYAGSKEKAEAVVEEIKAKGVDSFAIQANVADADEVKAMIKEVVSQFGS 82 (246)
T ss_dssp CSCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTSCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 3578999999999999999999899999998876 4444443332 234321 1344443123222322211 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 83 id~lv~nAg~ 92 (246)
T 3osu_A 83 LDVLVNNAGI 92 (246)
T ss_dssp CCEEEECCCC
T ss_pred CCEEEECCCC
Confidence 9999999883
|
| >1sny_A Sniffer CG10964-PA; alpha and beta protein, rossmann fold, dinucleotide binding oxidoreductase; HET: NAP; 1.75A {Drosophila melanogaster} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00053 Score=58.12 Aligned_cols=81 Identities=10% Similarity=0.209 Sum_probs=53.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcC---CEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCchhHHH---HHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPDLNE---ALKRY 218 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~g---a~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~~~~---~i~~~ 218 (342)
..+.++||+||+|++|.++++.+...| ++|++++++.++.+.+. ++ +.. . ..|..+...+.+ .+.+.
T Consensus 19 ~~~k~vlITGasggIG~~la~~L~~~G~~~~~V~~~~r~~~~~~~~~-~l~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 97 (267)
T 1sny_A 19 SHMNSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELE-DLAKNHSNIHILEIDLRNFDAYDKLVADIEGV 97 (267)
T ss_dssp -CCSEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHH-HHHHHCTTEEEEECCTTCGGGHHHHHHHHHHH
T ss_pred CCCCEEEEECCCCcHHHHHHHHHHhcCCCCcEEEEEecChhhhHHHH-HhhccCCceEEEEecCCChHHHHHHHHHHHHh
Confidence 346789999999999999999888889 99999999876544443 22 221 1 134444323333 33333
Q ss_pred CCC-CccEEEeCCCh
Q 019332 219 FPE-GIDIYFENVGG 232 (342)
Q Consensus 219 ~~~-~~d~vid~~g~ 232 (342)
.+. ++|++|+++|.
T Consensus 98 ~g~~~id~li~~Ag~ 112 (267)
T 1sny_A 98 TKDQGLNVLFNNAGI 112 (267)
T ss_dssp HGGGCCSEEEECCCC
T ss_pred cCCCCccEEEECCCc
Confidence 332 59999999883
|
| >3h9u_A Adenosylhomocysteinase; NAD CO-factor complex, structural genomics, SGC stockholm, S genomics consortium, SGC, hydrolase, NAD; HET: NAD ADN PG4; 1.90A {Trypanosoma brucei} PDB: 3g1u_A* 1b3r_A* 1k0u_A* 1ky4_A* 2h5l_A* 1xwf_A* 1d4f_A* 1ky5_A* 3nj4_A* 1li4_A* 1a7a_A* | Back alignment and structure |
|---|
Probab=97.25 E-value=0.00077 Score=60.66 Aligned_cols=90 Identities=13% Similarity=0.169 Sum_probs=69.2
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.-.|.+|+|.|. |.+|...++.++.+|++|+++.+++.+...+. ..|.... ++.+.++ ..|+++.+
T Consensus 208 ~L~GktVgIiG~-G~IG~~vA~~Lka~Ga~Viv~D~~p~~a~~A~-~~G~~~~-------sL~eal~-----~ADVVilt 273 (436)
T 3h9u_A 208 MIAGKTACVCGY-GDVGKGCAAALRGFGARVVVTEVDPINALQAA-MEGYQVL-------LVEDVVE-----EAHIFVTT 273 (436)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-------CHHHHTT-----TCSEEEEC
T ss_pred cccCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCChhhhHHHH-HhCCeec-------CHHHHHh-----hCCEEEEC
Confidence 457899999996 99999999999999999999999887766666 6675321 3333332 38999988
Q ss_pred CCh-hhHH-HHHHhhhhCCEEEEEce
Q 019332 230 VGG-KMLD-AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~-~~~~-~~~~~l~~~G~~v~~g~ 253 (342)
.+. ..+. ..++.++++..++.++.
T Consensus 274 ~gt~~iI~~e~l~~MK~gAIVINvgR 299 (436)
T 3h9u_A 274 TGNDDIITSEHFPRMRDDAIVCNIGH 299 (436)
T ss_dssp SSCSCSBCTTTGGGCCTTEEEEECSS
T ss_pred CCCcCccCHHHHhhcCCCcEEEEeCC
Confidence 886 3333 66788899999998875
|
| >2jl1_A Triphenylmethane reductase; oxidoreductase, bioremediation; HET: NAP GOL; 1.96A {Citrobacter SP} PDB: 2vrb_A* 2vrc_A 2vrc_D | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0015 Score=55.83 Aligned_cols=95 Identities=20% Similarity=0.249 Sum_probs=64.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|.+|...++.+... |++|++++++.++.+.+. ..+... ..|..+. +.+.+... ++|+||.+++
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~~a~ 75 (287)
T 2jl1_A 2 SIAVTGATGQLGGLVIQHLLKKVPASQIIAIVRNVEKASTLA-DQGVEVRHGDYNQP----ESLQKAFA-GVSKLLFISG 75 (287)
T ss_dssp CEEETTTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTTHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECCC
T ss_pred eEEEEcCCchHHHHHHHHHHHhCCCCeEEEEEcCHHHHhHHh-hcCCeEEEeccCCH----HHHHHHHh-cCCEEEEcCC
Confidence 5899999999999999888777 899999999887766555 445432 2344432 34444443 4999999988
Q ss_pred h--------hhHHHHHHhhhhC--CEEEEEceec
Q 019332 232 G--------KMLDAVLLNMKIH--GRIAVCGMIS 255 (342)
Q Consensus 232 ~--------~~~~~~~~~l~~~--G~~v~~g~~~ 255 (342)
. .....+++.++.. ++++.+++..
T Consensus 76 ~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~Ss~~ 109 (287)
T 2jl1_A 76 PHYDNTLLIVQHANVVKAARDAGVKHIAYTGYAF 109 (287)
T ss_dssp CCSCHHHHHHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred CCcCchHHHHHHHHHHHHHHHcCCCEEEEECCCC
Confidence 4 1223444555444 4888887644
|
| >4e3z_A Putative oxidoreductase protein; PSI-biology, structural genomics, protein structure initiati nysgrc,oxidoreductase; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.001 Score=56.59 Aligned_cols=81 Identities=17% Similarity=0.190 Sum_probs=52.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~ 221 (342)
..+.++||+||+|++|.+.++.+...|++|+++ .++.++.+.+.++ .+.. . ..|..+..++.+.+.+... +
T Consensus 24 ~~~k~vlITGas~gIG~a~a~~l~~~G~~V~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 103 (272)
T 4e3z_A 24 SDTPVVLVTGGSRGIGAAVCRLAARQGWRVGVNYAANREAADAVVAAITESGGEAVAIPGDVGNAADIAAMFSAVDRQFG 103 (272)
T ss_dssp CCSCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred cCCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCChhHHHHHHHHHHhcCCcEEEEEcCCCCHHHHHHHHHHHHHhCC
Confidence 456799999999999999999999999999776 6666655544322 2332 1 1244443123222222211 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 104 ~id~li~nAg 113 (272)
T 4e3z_A 104 RLDGLVNNAG 113 (272)
T ss_dssp CCCEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999988
|
| >3dr5_A Putative O-methyltransferase; Q8NRD3, CGL1119, PF01596, CGR117, NESG, structural genomics, PSI-2, protein structure initiative; 2.25A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=97.24 E-value=0.0027 Score=52.22 Aligned_cols=102 Identities=11% Similarity=0.108 Sum_probs=69.7
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCC-eeEecCCchhHHHHHHHHCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFD-EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~i~~~~~~ 221 (342)
.+.+++.+||=.| .+.|..++.+++.+ +.+|++++.+++..+.+++. .|.. .-+..... +..+.+.....+
T Consensus 52 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~~i~~~~g-da~~~l~~~~~~ 128 (221)
T 3dr5_A 52 TNGNGSTGAIAIT--PAAGLVGLYILNGLADNTTLTCIDPESEHQRQAKALFREAGYSPSRVRFLLS-RPLDVMSRLAND 128 (221)
T ss_dssp SCCTTCCEEEEES--TTHHHHHHHHHHHSCTTSEEEEECSCHHHHHHHHHHHHHTTCCGGGEEEECS-CHHHHGGGSCTT
T ss_pred hCCCCCCCEEEEc--CCchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCcCcEEEEEc-CHHHHHHHhcCC
Confidence 3445566999888 57899999999976 67999999999887777642 3443 22333333 444444333234
Q ss_pred CccEEEeCCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 222 GIDIYFENVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 222 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
.||+||-.... ..+..+.+.|+++|.++.-.
T Consensus 129 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~dn 163 (221)
T 3dr5_A 129 SYQLVFGQVSPMDLKALVDAAWPLLRRGGALVLAD 163 (221)
T ss_dssp CEEEEEECCCTTTHHHHHHHHHHHEEEEEEEEETT
T ss_pred CcCeEEEcCcHHHHHHHHHHHHHHcCCCcEEEEeC
Confidence 79998754332 35778899999999988643
|
| >2zcu_A Uncharacterized oxidoreductase YTFG; alpha-beta sandwich; 1.80A {Escherichia coli} PDB: 2zcv_A* | Back alignment and structure |
|---|
Probab=97.22 E-value=0.0013 Score=56.23 Aligned_cols=96 Identities=19% Similarity=0.215 Sum_probs=63.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|.+|...++.+... |++|+++++++++.+.+. ..+... ..|..+. +.+.+... ++|+||.+++
T Consensus 1 ~ilVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~a~ 74 (286)
T 2zcu_A 1 MIAITGATGQLGHYVIESLMKTVPASQIVAIVRNPAKAQALA-AQGITVRQADYGDE----AALTSALQ-GVEKLLLISS 74 (286)
T ss_dssp CEEEESTTSHHHHHHHHHHTTTSCGGGEEEEESCTTTCHHHH-HTTCEEEECCTTCH----HHHHHHTT-TCSEEEECC-
T ss_pred CEEEEcCCchHHHHHHHHHHhhCCCceEEEEEcChHhhhhhh-cCCCeEEEcCCCCH----HHHHHHHh-CCCEEEEeCC
Confidence 4899999999999999888777 899999999887665554 445432 2344432 33444443 4899999987
Q ss_pred hh------hHHHHHHhhhh-C-CEEEEEceecc
Q 019332 232 GK------MLDAVLLNMKI-H-GRIAVCGMISQ 256 (342)
Q Consensus 232 ~~------~~~~~~~~l~~-~-G~~v~~g~~~~ 256 (342)
.. ....+++.++. + ++++.+++...
T Consensus 75 ~~~~~~~~~~~~l~~a~~~~~~~~~v~~Ss~~~ 107 (286)
T 2zcu_A 75 SEVGQRAPQHRNVINAAKAAGVKFIAYTSLLHA 107 (286)
T ss_dssp -------CHHHHHHHHHHHHTCCEEEEEEETTT
T ss_pred CCchHHHHHHHHHHHHHHHcCCCEEEEECCCCC
Confidence 41 23344554444 3 58888876443
|
| >2bka_A CC3, TAT-interacting protein TIP30; NADPH, PEG600, transcription; HET: NDP PE8; 1.7A {Homo sapiens} SCOP: c.2.1.2 PDB: 2fmu_A | Back alignment and structure |
|---|
Probab=97.21 E-value=0.00041 Score=57.85 Aligned_cols=98 Identities=17% Similarity=0.130 Sum_probs=62.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+.++||+||+|++|.+.++.+...|+ +|+++++++++.+... .-+... ..|..+. +.+.+... ++|+++++
T Consensus 18 ~~~vlVtGasg~iG~~l~~~L~~~G~~~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~~ 91 (242)
T 2bka_A 18 NKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFCC 91 (242)
T ss_dssp CCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEEC
T ss_pred CCeEEEECCCcHHHHHHHHHHHcCCCCCEEEEEEcCCCCccccc-cCCceEEecCcCCH----HHHHHHhc-CCCEEEEC
Confidence 56899999999999999998888899 9999998876533221 112211 1232222 22333322 59999999
Q ss_pred CChhh---------------HHHHHHhhhhC--CEEEEEceecc
Q 019332 230 VGGKM---------------LDAVLLNMKIH--GRIAVCGMISQ 256 (342)
Q Consensus 230 ~g~~~---------------~~~~~~~l~~~--G~~v~~g~~~~ 256 (342)
+|... ...+++.+++. ++++.+++...
T Consensus 92 ag~~~~~~~~~~~~~~n~~~~~~~~~~~~~~~~~~iv~~SS~~~ 135 (242)
T 2bka_A 92 LGTTRGKAGAEGFVRVDRDYVLKSAELAKAGGCKHFNLLSSKGA 135 (242)
T ss_dssp CCCCHHHHHHHHHHHHHTHHHHHHHHHHHHTTCCEEEEECCTTC
T ss_pred CCcccccCCcccceeeeHHHHHHHHHHHHHCCCCEEEEEccCcC
Confidence 98521 12233444443 68998887544
|
| >3qlj_A Short chain dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, tuberculosis; 1.80A {Mycobacterium avium} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.0013 Score=57.62 Aligned_cols=81 Identities=17% Similarity=0.211 Sum_probs=52.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC----------hhhHHHHHH---HcCCCee---EecCCchhHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS----------KDKIDLLKN---KFGFDEA---FNYKEEPDLNEAL 215 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s----------~~~~~~~~~---~~g~~~v---~~~~~~~~~~~~i 215 (342)
.+.++||+||++++|.+.++.+...|++|++++++ .++.+.+.+ +.+.... .|..+..++.+.+
T Consensus 26 ~gk~vlVTGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~ 105 (322)
T 3qlj_A 26 DGRVVIVTGAGGGIGRAHALAFAAEGARVVVNDIGVGLDGSPASGGSAAQSVVDEITAAGGEAVADGSNVADWDQAAGLI 105 (322)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSSBTCTTSHHHHHHHHHHHTTCEEEEECCCTTSHHHHHHHH
T ss_pred CCCEEEEECCCcHHHHHHHHHHHHCCCEEEEEeCcccccccccccHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHH
Confidence 56899999999999999999888889999999876 444433322 2343211 2334431222222
Q ss_pred HHHCC--CCccEEEeCCCh
Q 019332 216 KRYFP--EGIDIYFENVGG 232 (342)
Q Consensus 216 ~~~~~--~~~d~vid~~g~ 232 (342)
.+... +++|++++++|.
T Consensus 106 ~~~~~~~g~iD~lv~nAg~ 124 (322)
T 3qlj_A 106 QTAVETFGGLDVLVNNAGI 124 (322)
T ss_dssp HHHHHHHSCCCEEECCCCC
T ss_pred HHHHHHcCCCCEEEECCCC
Confidence 22211 369999999983
|
| >2dkn_A 3-alpha-hydroxysteroid dehydrogenase; oxidoreductase, rossmann fold; HET: NAI; 1.80A {Pseudomonas SP} | Back alignment and structure |
|---|
Probab=97.20 E-value=0.00098 Score=55.87 Aligned_cols=94 Identities=17% Similarity=0.220 Sum_probs=58.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-h
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-K 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~ 233 (342)
+|||+||+|++|..+++.+...|++|+++++++++.+ . ....|..+...+.+.+.+. .+++|++++++|. .
T Consensus 3 ~vlVtGasg~iG~~l~~~L~~~g~~V~~~~r~~~~~~----~---~~~~D~~~~~~~~~~~~~~-~~~~d~vi~~Ag~~~ 74 (255)
T 2dkn_A 3 VIAITGSASGIGAALKELLARAGHTVIGIDRGQADIE----A---DLSTPGGRETAVAAVLDRC-GGVLDGLVCCAGVGV 74 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSSSEE----C---CTTSHHHHHHHHHHHHHHH-TTCCSEEEECCCCCT
T ss_pred EEEEeCCCcHHHHHHHHHHHhCCCEEEEEeCChhHcc----c---cccCCcccHHHHHHHHHHc-CCCccEEEECCCCCC
Confidence 6999999999999999888888999999998765421 0 0001111110222223332 2469999999884 2
Q ss_pred ------------------hHHHHHHhhhhC--CEEEEEceecc
Q 019332 234 ------------------MLDAVLLNMKIH--GRIAVCGMISQ 256 (342)
Q Consensus 234 ------------------~~~~~~~~l~~~--G~~v~~g~~~~ 256 (342)
.++.+.+.++.. ++++.+++...
T Consensus 75 ~~~~~~~~~~~N~~~~~~l~~~~~~~~~~~~~~~iv~~sS~~~ 117 (255)
T 2dkn_A 75 TAANSGLVVAVNYFGVSALLDGLAEALSRGQQPAAVIVGSIAA 117 (255)
T ss_dssp TSSCHHHHHHHHTHHHHHHHHHHHHHHHTSSSCEEEEECCGGG
T ss_pred cchhHHHHHHHHhHHHHHHHHHHHHHhhhcCCceEEEEecccc
Confidence 112233344333 89999887544
|
| >3tfw_A Putative O-methyltransferase; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium; 1.88A {Klebsiella pneumoniae subsp} | Back alignment and structure |
|---|
Probab=97.19 E-value=0.0008 Score=56.49 Aligned_cols=103 Identities=13% Similarity=0.074 Sum_probs=70.1
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCC-
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPE- 221 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~- 221 (342)
..+.++.+||-.|. |.|..++.+++.+ +.+|++++.+++..+.+++. .|....+..... +..+.+......
T Consensus 59 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~l~~~~~~~ 135 (248)
T 3tfw_A 59 VRLTQAKRILEIGT--LGGYSTIWMARELPADGQLLTLEADAHHAQVARENLQLAGVDQRVTLREG-PALQSLESLGECP 135 (248)
T ss_dssp HHHHTCSEEEEECC--TTSHHHHHHHTTSCTTCEEEEEECCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHTCCSCC
T ss_pred HhhcCCCEEEEecC--CchHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHhcCCCC
Confidence 34567889999994 5688899999887 56999999999888777633 254322222222 444445444332
Q ss_pred CccEEEeCCCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 222 GIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 ~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+|+|+-.... ..+..+.+.|+++|.++.-..
T Consensus 136 ~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~~~~ 171 (248)
T 3tfw_A 136 AFDLIFIDADKPNNPHYLRWALRYSRPGTLIIGDNV 171 (248)
T ss_dssp CCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEECC
T ss_pred CeEEEEECCchHHHHHHHHHHHHhcCCCeEEEEeCC
Confidence 79998833222 367788899999999887543
|
| >3njr_A Precorrin-6Y methylase; methyltransferase, decarboxylase, transferase; HET: SAH PG4; 2.70A {Rhodobacter capsulatus} | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0011 Score=53.90 Aligned_cols=99 Identities=18% Similarity=0.282 Sum_probs=69.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~ 219 (342)
....+.++++||-.|+ | .|..++.+++. +.+|++++.+++..+.+++. +|.. . ++..+. .+.+..
T Consensus 49 ~~l~~~~~~~vLDlGc-G-~G~~~~~la~~-~~~v~~vD~s~~~~~~a~~~~~~~g~~~~v~~~~~d~----~~~~~~-- 119 (204)
T 3njr_A 49 AALAPRRGELLWDIGG-G-SGSVSVEWCLA-GGRAITIEPRADRIENIQKNIDTYGLSPRMRAVQGTA----PAALAD-- 119 (204)
T ss_dssp HHHCCCTTCEEEEETC-T-TCHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCT----TGGGTT--
T ss_pred HhcCCCCCCEEEEecC-C-CCHHHHHHHHc-CCEEEEEeCCHHHHHHHHHHHHHcCCCCCEEEEeCch----hhhccc--
Confidence 4467889999999995 3 48888899988 88999999999888777632 3543 2 222221 111111
Q ss_pred CCCccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PEGIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+|+|+...+. ..+..+.+.|+++|+++....
T Consensus 120 ~~~~D~v~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 155 (204)
T 3njr_A 120 LPLPEAVFIGGGGSQALYDRLWEWLAPGTRIVANAV 155 (204)
T ss_dssp SCCCSEEEECSCCCHHHHHHHHHHSCTTCEEEEEEC
T ss_pred CCCCCEEEECCcccHHHHHHHHHhcCCCcEEEEEec
Confidence 1269999876553 267888899999999987643
|
| >3tnl_A Shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD SKM; 1.45A {Listeria monocytogenes} PDB: 3toz_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0029 Score=54.83 Aligned_cols=76 Identities=16% Similarity=0.161 Sum_probs=53.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC---hhhHHHHHHHc----CC-CeeEecCCchhHHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS---KDKIDLLKNKF----GF-DEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s---~~~~~~~~~~~----g~-~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
-.+.++||+|+ |++|.+++..+...|+ +|+++.|+ .++.+.+.+++ +. ..++++.+..++.+.+.
T Consensus 152 l~gk~~lVlGa-GG~g~aia~~L~~~Ga~~V~i~nR~~~~~~~a~~la~~~~~~~~~~~~~~~~~~~~~l~~~l~----- 225 (315)
T 3tnl_A 152 IIGKKMTICGA-GGAATAICIQAALDGVKEISIFNRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIA----- 225 (315)
T ss_dssp CTTSEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred ccCCEEEEECC-ChHHHHHHHHHHHCCCCEEEEEECCCchHHHHHHHHHHhhhhcCCceEEeccchHHHHHhhhc-----
Confidence 36789999997 9999999999999999 89999999 66666554333 22 13455554213333333
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|+|++|...
T Consensus 226 ~aDiIINaTp~ 236 (315)
T 3tnl_A 226 ESVIFTNATGV 236 (315)
T ss_dssp TCSEEEECSST
T ss_pred CCCEEEECccC
Confidence 38999999873
|
| >2hmt_A YUAA protein; RCK, KTN, KTR, KTRA, ktrab, membrane protein, ION transporter, symporter, transport protein; HET: NAI; 2.20A {Bacillus subtilis} SCOP: c.2.1.9 PDB: 2hms_A* 2hmu_A* 2hmv_A* 2hmw_A* 1lsu_A* | Back alignment and structure |
|---|
Probab=97.17 E-value=0.0013 Score=49.76 Aligned_cols=76 Identities=11% Similarity=0.142 Sum_probs=53.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+.+|+|+|+ |.+|...++.+...|++|+++++++++.+.++ +.+.. ++..+.. + .+.+.+...+++|+++.|.+.
T Consensus 6 ~~~v~I~G~-G~iG~~~a~~l~~~g~~v~~~d~~~~~~~~~~-~~~~~-~~~~d~~-~-~~~l~~~~~~~~d~vi~~~~~ 80 (144)
T 2hmt_A 6 NKQFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATH-AVIANAT-E-ENELLSLGIRNFEYVIVAIGA 80 (144)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHTTT-TTCSE-EEECCTT-C-HHHHHTTTGGGCSEEEECCCS
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HhCCE-EEEeCCC-C-HHHHHhcCCCCCCEEEECCCC
Confidence 457999997 99999999999999999999999888776665 45543 2322211 2 233443312369999999996
Q ss_pred h
Q 019332 233 K 233 (342)
Q Consensus 233 ~ 233 (342)
.
T Consensus 81 ~ 81 (144)
T 2hmt_A 81 N 81 (144)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3tl3_A Short-chain type dehydrogenase/reductase; ssgcid, seattle structural genomics center for infectious DI oxidoreductase; 1.85A {Mycobacterium ulcerans} | Back alignment and structure |
|---|
Probab=97.16 E-value=0.0011 Score=55.92 Aligned_cols=76 Identities=12% Similarity=0.130 Sum_probs=51.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e--eEecCCchhH---HHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEPDL---NEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~~~---~~~i~~~~~~~~d~ 225 (342)
.+.++||+||++++|.+.++.+...|++|++++++.++ ... +++.. . ..|..+..++ .+.+.+ .+++|+
T Consensus 8 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~--~~~-~~~~~~~~~~~D~~~~~~v~~~~~~~~~--~g~id~ 82 (257)
T 3tl3_A 8 RDAVAVVTGGASGLGLATTKRLLDAGAQVVVLDIRGED--VVA-DLGDRARFAAADVTDEAAVASALDLAET--MGTLRI 82 (257)
T ss_dssp --CEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCHH--HHH-HTCTTEEEEECCTTCHHHHHHHHHHHHH--HSCEEE
T ss_pred cCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCchHH--HHH-hcCCceEEEECCCCCHHHHHHHHHHHHH--hCCCCE
Confidence 46789999999999999998888889999999985543 333 55542 1 2344444122 222333 246999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 83 lv~nAg~ 89 (257)
T 3tl3_A 83 VVNCAGT 89 (257)
T ss_dssp EEECGGG
T ss_pred EEECCCC
Confidence 9999983
|
| >3icc_A Putative 3-oxoacyl-(acyl carrier protein) reducta; structural genomics, putative 3-oxoacyl-(acyl carrier protei reductase, oxidoreductase; HET: NAP MES; 1.87A {Bacillus anthracis str} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.001 Score=55.92 Aligned_cols=105 Identities=17% Similarity=0.205 Sum_probs=62.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEE-eCChhhHHHHHHH---cCCC-ee--EecCCchh---HHHHHHHHC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGS-AGSKDKIDLLKNK---FGFD-EA--FNYKEEPD---LNEALKRYF-- 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~-~~s~~~~~~~~~~---~g~~-~v--~~~~~~~~---~~~~i~~~~-- 219 (342)
.+.++||+||++++|.+.++.+...|++|+++ .++.++.+.+.++ .+.. .. .|..+..+ +.+.+.+..
T Consensus 6 ~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~~~~~~~~ 85 (255)
T 3icc_A 6 KGKVALVTGASRGIGRAIAKRLANDGALVAIHYGNRKEEAEETVYEIQSNGGSAFSIGANLESLHGVEALYSSLDNELQN 85 (255)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCSHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCeEEEEeCCchHHHHHHHHHHHhcCCceEEEecCcCCHHHHHHHHHHHHHHhcc
Confidence 56899999999999999999998999999886 4555444433222 2321 11 23333211 222222211
Q ss_pred --C-CCccEEEeCCChh-----------hH---------------HHHHHhhhhCCEEEEEceecc
Q 019332 220 --P-EGIDIYFENVGGK-----------ML---------------DAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 220 --~-~~~d~vid~~g~~-----------~~---------------~~~~~~l~~~G~~v~~g~~~~ 256 (342)
. +.+|++++++|.. .+ ..+++.++++|+++.+++...
T Consensus 86 ~~~~~~id~lv~nAg~~~~~~~~~~~~~~~~~~~~~N~~g~~~l~~~~~~~~~~~~~iv~isS~~~ 151 (255)
T 3icc_A 86 RTGSTKFDILINNAGIGPGAFIEETTEQFFDRMVSVNAKAPFFIIQQALSRLRDNSRIINISSAAT 151 (255)
T ss_dssp HHSSSCEEEEEECCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHTTTEEEEEEEEEECCGGG
T ss_pred cccCCcccEEEECCCCCCCCChhhCCHHHHHHHHhhhchHHHHHHHHHHHhhCCCCEEEEeCChhh
Confidence 1 2499999998831 11 122233445789999987654
|
| >3gdg_A Probable NADP-dependent mannitol dehydrogenase; rossmann fold, beta-alpha-beta motifs, open twisted sheet, A NADP, oxidoreductase; 2.30A {Cladosporium herbarum} SCOP: c.2.1.0 PDB: 3gdf_A | Back alignment and structure |
|---|
Probab=97.14 E-value=0.001 Score=56.33 Aligned_cols=79 Identities=19% Similarity=0.275 Sum_probs=52.1
Q ss_pred CCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChhhH-----HHHHHHcCCCe---eEecCCchhH---HHHHHHH
Q 019332 152 QGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKI-----DLLKNKFGFDE---AFNYKEEPDL---NEALKRY 218 (342)
Q Consensus 152 ~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~~~-----~~~~~~~g~~~---v~~~~~~~~~---~~~i~~~ 218 (342)
.+.++||+||+ +++|.+.++.+...|++|++++++.++. +.+.+..+... ..|..+..++ .+.+.+.
T Consensus 19 ~~k~vlITGas~~~giG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~ 98 (267)
T 3gdg_A 19 KGKVVVVTGASGPKGMGIEAARGCAEMGAAVAITYASRAQGAEENVKELEKTYGIKAKAYKCQVDSYESCEKLVKDVVAD 98 (267)
T ss_dssp TTCEEEETTCCSSSSHHHHHHHHHHHTSCEEEECBSSSSSHHHHHHHHHHHHHCCCEECCBCCTTCHHHHHHHHHHHHHH
T ss_pred CCCEEEEECCCCCCChHHHHHHHHHHCCCeEEEEeCCcchhHHHHHHHHHHhcCCceeEEecCCCCHHHHHHHHHHHHHH
Confidence 46799999998 8999999988888899999998775432 22221334321 2344443222 2333333
Q ss_pred CCCCccEEEeCCC
Q 019332 219 FPEGIDIYFENVG 231 (342)
Q Consensus 219 ~~~~~d~vid~~g 231 (342)
. +.+|++++++|
T Consensus 99 ~-g~id~li~nAg 110 (267)
T 3gdg_A 99 F-GQIDAFIANAG 110 (267)
T ss_dssp T-SCCSEEEECCC
T ss_pred c-CCCCEEEECCC
Confidence 3 36999999988
|
| >3gk3_A Acetoacetyl-COA reductase; acetoacetyl-CO reductase, oxidoreductase, structural genomics; 2.10A {Burkholderia pseudomallei 1710B} | Back alignment and structure |
|---|
Probab=97.14 E-value=0.0011 Score=56.32 Aligned_cols=81 Identities=16% Similarity=0.268 Sum_probs=51.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHHH---cCCC-e--eEecCCchhHHHHHHHHCC--C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKNK---FGFD-E--AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~~---~g~~-~--v~~~~~~~~~~~~i~~~~~--~ 221 (342)
..+.++||+||++++|.+.++.+...|++|+++. ++.++.+...++ .+.. . ..|..+..++.+.+.+... +
T Consensus 23 ~~~k~vlITGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g 102 (269)
T 3gk3_A 23 QAKRVAFVTGGMGGLGAAISRRLHDAGMAVAVSHSERNDHVSTWLMHERDAGRDFKAYAVDVADFESCERCAEKVLADFG 102 (269)
T ss_dssp -CCCEEEETTTTSHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHHHHTTTCCCEEEECCTTCHHHHHHHHHHHHHHHS
T ss_pred hcCCEEEEECCCchHHHHHHHHHHHCCCEEEEEcCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHcC
Confidence 3567899999999999999999988999999988 444443332212 2321 1 2344444122222222211 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 103 ~id~li~nAg 112 (269)
T 3gk3_A 103 KVDVLINNAG 112 (269)
T ss_dssp CCSEEEECCC
T ss_pred CCCEEEECCC
Confidence 6999999988
|
| >2z1m_A GDP-D-mannose dehydratase; short-chain dehydrogenase/reductase, lyase, structural genom NPPSFA; HET: NDP GDP; 2.00A {Aquifex aeolicus} PDB: 2z95_A* | Back alignment and structure |
|---|
Probab=97.12 E-value=0.0018 Score=56.81 Aligned_cols=76 Identities=17% Similarity=0.268 Sum_probs=50.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHcCC--C-ee--EecCCchhHHHHHHHHCCCCccE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI--DLLKNKFGF--D-EA--FNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~--~~~~~~~g~--~-~v--~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
+.+|||+||+|.+|..+++.+...|++|++++++.++. +.+. .++. . .. .|..+...+.+.++.. ++|+
T Consensus 3 ~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~ 78 (345)
T 2z1m_A 3 GKRALITGIRGQDGAYLAKLLLEKGYEVYGADRRSGEFASWRLK-ELGIENDVKIIHMDLLEFSNIIRTIEKV---QPDE 78 (345)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEECSCCSTTTTHHHH-HTTCTTTEEECCCCTTCHHHHHHHHHHH---CCSE
T ss_pred CCEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcccccccHh-hccccCceeEEECCCCCHHHHHHHHHhc---CCCE
Confidence 56899999999999999988888899999999876542 2333 4421 1 11 2433331233333322 5899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
||+++|.
T Consensus 79 vih~A~~ 85 (345)
T 2z1m_A 79 VYNLAAQ 85 (345)
T ss_dssp EEECCCC
T ss_pred EEECCCC
Confidence 9999884
|
| >3un1_A Probable oxidoreductase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 2.45A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=97.12 E-value=0.00026 Score=60.00 Aligned_cols=76 Identities=18% Similarity=0.124 Sum_probs=50.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCC--CCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFP--EGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~--~~~d~vid 228 (342)
.+.++||+||+|++|.+.++.+...|++|++++++.++... ..+. ...|..+..++.+.+.+... +++|++++
T Consensus 27 ~~k~vlVTGas~gIG~aia~~l~~~G~~V~~~~r~~~~~~~----~~~~~~~~Dv~d~~~v~~~~~~~~~~~g~iD~lv~ 102 (260)
T 3un1_A 27 QQKVVVITGASQGIGAGLVRAYRDRNYRVVATSRSIKPSAD----PDIHTVAGDISKPETADRIVREGIERFGRIDSLVN 102 (260)
T ss_dssp TCCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSCCCCSS----TTEEEEESCTTSHHHHHHHHHHHHHHHSCCCEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChhhccc----CceEEEEccCCCHHHHHHHHHHHHHHCCCCCEEEE
Confidence 46799999999999999999988899999999987654221 1111 12344443122222322211 36999999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
++|
T Consensus 103 nAg 105 (260)
T 3un1_A 103 NAG 105 (260)
T ss_dssp CCC
T ss_pred CCC
Confidence 998
|
| >2x4g_A Nucleoside-diphosphate-sugar epimerase; isomerase; 2.65A {Pseudomonas aeruginosa} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.0023 Score=56.12 Aligned_cols=96 Identities=16% Similarity=0.105 Sum_probs=60.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
-+|||+||+|.+|..+++.+...|++|++++++..+.+.+. ..++.. ..|..+. +.+.+... ++|+||.+++.
T Consensus 14 M~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~l~-~~~~~~~~~Dl~d~----~~~~~~~~-~~d~vih~a~~ 87 (342)
T 2x4g_A 14 VKYAVLGATGLLGHHAARAIRAAGHDLVLIHRPSSQIQRLA-YLEPECRVAEMLDH----AGLERALR-GLDGVIFSAGY 87 (342)
T ss_dssp CEEEEESTTSHHHHHHHHHHHHTTCEEEEEECTTSCGGGGG-GGCCEEEECCTTCH----HHHHHHTT-TCSEEEEC---
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCEEEEEecChHhhhhhc-cCCeEEEEecCCCH----HHHHHHHc-CCCEEEECCcc
Confidence 37999999999999999988888999999999876544333 334422 1233332 33444443 49999999884
Q ss_pred hh----------------HHHHHHhhhh-C-CEEEEEceec
Q 019332 233 KM----------------LDAVLLNMKI-H-GRIAVCGMIS 255 (342)
Q Consensus 233 ~~----------------~~~~~~~l~~-~-G~~v~~g~~~ 255 (342)
.. ...+++.+.+ + +++|.+++..
T Consensus 88 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~~v~~SS~~ 128 (342)
T 2x4g_A 88 YPSRPRRWQEEVASALGQTNPFYAACLQARVPRILYVGSAY 128 (342)
T ss_dssp ---------CHHHHHHHHHHHHHHHHHHHTCSCEEEECCGG
T ss_pred CcCCCCCHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECCHH
Confidence 11 1233343333 3 6899887644
|
| >3d7l_A LIN1944 protein; APC89317, structural genomics, PS protein structure initiative, midwest center for structural genomics, MCSG; 2.06A {Listeria innocua} | Back alignment and structure |
|---|
Probab=97.09 E-value=0.002 Score=52.02 Aligned_cols=63 Identities=14% Similarity=0.236 Sum_probs=46.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++||+||+|++|.+.++.+. .|++|++++++.+ ....|..+...+.+.+.+. +.+|++++++|
T Consensus 5 ~vlVtGasg~iG~~~~~~l~-~g~~V~~~~r~~~-----------~~~~D~~~~~~~~~~~~~~--~~~d~vi~~ag 67 (202)
T 3d7l_A 5 KILLIGASGTLGSAVKERLE-KKAEVITAGRHSG-----------DVTVDITNIDSIKKMYEQV--GKVDAIVSATG 67 (202)
T ss_dssp EEEEETTTSHHHHHHHHHHT-TTSEEEEEESSSS-----------SEECCTTCHHHHHHHHHHH--CCEEEEEECCC
T ss_pred EEEEEcCCcHHHHHHHHHHH-CCCeEEEEecCcc-----------ceeeecCCHHHHHHHHHHh--CCCCEEEECCC
Confidence 79999999999999988888 8999999998754 1223444432333444443 46899999988
|
| >3sxp_A ADP-L-glycero-D-mannoheptose-6-epimerase; rossman fold, NAD binding, isomerase; HET: NAD; 2.55A {Helicobacter pylori} | Back alignment and structure |
|---|
Probab=97.08 E-value=0.003 Score=56.04 Aligned_cols=99 Identities=16% Similarity=0.184 Sum_probs=59.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHH--cCCEEEEEeCChhhHHH----------HHHHcCC-Cee--EecCCchhHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQFAKL--LGCYVVGSAGSKDKIDL----------LKNKFGF-DEA--FNYKEEPDLNEALK 216 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~--~ga~Vi~~~~s~~~~~~----------~~~~~g~-~~v--~~~~~~~~~~~~i~ 216 (342)
.+.+|||+||+|.+|..+++.+.. .|++|++++++...... ..+..+. ..+ .|..+. +.+.
T Consensus 9 ~~~~vlVTGatG~IG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~ 84 (362)
T 3sxp_A 9 ENQTILITGGAGFVGSNLAFHFQENHPKAKVVVLDKFRSNTLFSNNRPSSLGHFKNLIGFKGEVIAADINNP----LDLR 84 (362)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHHCTTSEEEEEECCCCC-------CCCCCCGGGGTTCCSEEEECCTTCH----HHHH
T ss_pred CCCEEEEECCCCHHHHHHHHHHHhhCCCCeEEEEECCCccccccccchhhhhhhhhccccCceEEECCCCCH----HHHH
Confidence 457999999999999998888887 89999999986541110 0001111 122 233333 3344
Q ss_pred HHCCCCccEEEeCCCh-hh---------------HHHHHHhhh-hCCEEEEEcee
Q 019332 217 RYFPEGIDIYFENVGG-KM---------------LDAVLLNMK-IHGRIAVCGMI 254 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~-~~---------------~~~~~~~l~-~~G~~v~~g~~ 254 (342)
+...+++|+||+++|. .. ...+++.++ .++++|.+++.
T Consensus 85 ~~~~~~~D~vih~A~~~~~~~~~~~~~~~~Nv~gt~~ll~aa~~~~~~~V~~SS~ 139 (362)
T 3sxp_A 85 RLEKLHFDYLFHQAAVSDTTMLNQELVMKTNYQAFLNLLEIARSKKAKVIYASSA 139 (362)
T ss_dssp HHTTSCCSEEEECCCCCGGGCCCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred HhhccCCCEEEECCccCCccccCHHHHHHHHHHHHHHHHHHHHHcCCcEEEeCcH
Confidence 4423479999999983 10 122333333 36688888763
|
| >3i4f_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, 3-oxoacyl-reductase, PSI-2; 2.39A {Bacillus thuringiensis serovar kurstakorganism_taxid} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0015 Score=55.17 Aligned_cols=80 Identities=18% Similarity=0.246 Sum_probs=51.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHHHc---CCC-e--eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKNKF---GFD-E--AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~~~---g~~-~--v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++.++++ ..+.+.+.+ +.. . ..|..+..++.+.+.+... ++
T Consensus 6 ~~k~vlVTGas~gIG~~~a~~l~~~G~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~~~~~v~~~~~~~~~~~g~ 85 (264)
T 3i4f_A 6 FVRHALITAGTKGLGKQVTEKLLAKGYSVTVTYHSDTTAMETMKETYKDVEERLQFVQADVTKKEDLHKIVEEAMSHFGK 85 (264)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHTGGGGGGEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred ccCEEEEeCCCchhHHHHHHHHHHCCCEEEEEcCCChHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 3578999999999999999988888999999876543 334443222 211 1 2344444233333332221 36
Q ss_pred ccEEEeCCC
Q 019332 223 IDIYFENVG 231 (342)
Q Consensus 223 ~d~vid~~g 231 (342)
+|++++++|
T Consensus 86 id~lv~~Ag 94 (264)
T 3i4f_A 86 IDFLINNAG 94 (264)
T ss_dssp CCEEECCCC
T ss_pred CCEEEECCc
Confidence 999999999
|
| >1xq6_A Unknown protein; structural genomics, protein structure initiative, CESG, AT5G02240, NADP, center for eukaryotic structural genomics; HET: NAP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1ybm_A* 2q46_A* 2q4b_A* | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0016 Score=54.32 Aligned_cols=74 Identities=20% Similarity=0.161 Sum_probs=50.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+|||+||+|.+|..+++.+... |++|+++++++++.+.+. .+... ..|..+. +.+.+... ++|++|+
T Consensus 3 ~~~~ilVtGasG~iG~~l~~~l~~~~~g~~V~~~~r~~~~~~~~~--~~~~~~~~D~~d~----~~~~~~~~-~~d~vi~ 75 (253)
T 1xq6_A 3 NLPTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDA----DSINPAFQ-GIDALVI 75 (253)
T ss_dssp SCCEEEEESTTSHHHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSH----HHHHHHHT-TCSEEEE
T ss_pred CCCEEEEEcCCcHHHHHHHHHHHhcCCCcEEEEEEcCCCchhhcC--CCeeEEEecCCCH----HHHHHHHc-CCCEEEE
Confidence 3578999999999999999888887 889999999876654321 12221 2344433 23333332 4899999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 76 ~a~~ 79 (253)
T 1xq6_A 76 LTSA 79 (253)
T ss_dssp CCCC
T ss_pred eccc
Confidence 8873
|
| >3jyo_A Quinate/shikimate dehydrogenase; enzyme-cofactor complex, amino-acid biosynthesis, aromatic A biosynthesis, NAD, oxidoreductase; HET: NAD; 1.00A {Corynebacterium glutamicum} PDB: 3jyp_A* 3jyq_A* 2nlo_A | Back alignment and structure |
|---|
Probab=97.08 E-value=0.0035 Score=53.62 Aligned_cols=75 Identities=12% Similarity=0.099 Sum_probs=53.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC----CeeEecCCchhHHHHHHHHCCCCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF----DEAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
-.+.+++|+|+ |++|.+++..+...|+ +|+++.|+.++.+.+.++++. ..+...... ++.+.+.+ +|+
T Consensus 125 l~~k~vlVlGa-GG~g~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~i~~~~~~-~l~~~l~~-----~Di 197 (283)
T 3jyo_A 125 AKLDSVVQVGA-GGVGNAVAYALVTHGVQKLQVADLDTSRAQALADVINNAVGREAVVGVDAR-GIEDVIAA-----ADG 197 (283)
T ss_dssp CCCSEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSSHHHHHHHHHHHHHHHTSCCEEEECST-THHHHHHH-----SSE
T ss_pred cCCCEEEEECC-cHHHHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEcCHH-HHHHHHhc-----CCE
Confidence 45789999997 9999999998888999 899999999887766434432 122122212 44444443 899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
|++|...
T Consensus 198 VInaTp~ 204 (283)
T 3jyo_A 198 VVNATPM 204 (283)
T ss_dssp EEECSST
T ss_pred EEECCCC
Confidence 9999873
|
| >3cbg_A O-methyltransferase; cyanobacterium; HET: SAH FER 4FE; 2.00A {Synechocystis SP} | Back alignment and structure |
|---|
Probab=97.03 E-value=0.0011 Score=55.12 Aligned_cols=101 Identities=13% Similarity=0.106 Sum_probs=68.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC---
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP--- 220 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~--- 220 (342)
...++.+||-.|. +.|..++.+++.. +.+|++++.+++..+.+++. .|....+..... +..+.+.++..
T Consensus 69 ~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~l~~l~~~~~ 145 (232)
T 3cbg_A 69 SLTGAKQVLEIGV--FRGYSALAMALQLPPDGQIIACDQDPNATAIAKKYWQKAGVAEKISLRLG-PALATLEQLTQGKP 145 (232)
T ss_dssp HHHTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHHHHHHTSSS
T ss_pred HhcCCCEEEEecC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcCC
Confidence 3456789999994 5899999999876 56999999999887777632 355322222222 44444444321
Q ss_pred -CCccEEE-eCCCh---hhHHHHHHhhhhCCEEEEEc
Q 019332 221 -EGIDIYF-ENVGG---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 221 -~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g 252 (342)
+.+|+|+ |+... ..+..+.+.|+++|.++.-.
T Consensus 146 ~~~fD~V~~d~~~~~~~~~l~~~~~~LkpgG~lv~~~ 182 (232)
T 3cbg_A 146 LPEFDLIFIDADKRNYPRYYEIGLNLLRRGGLMVIDN 182 (232)
T ss_dssp CCCEEEEEECSCGGGHHHHHHHHHHTEEEEEEEEEEC
T ss_pred CCCcCEEEECCCHHHHHHHHHHHHHHcCCCeEEEEeC
Confidence 4699988 43322 35788889999999998753
|
| >3m2p_A UDP-N-acetylglucosamine 4-epimerase; SGXNY, 11155J, isomerase, structural genomics, PSI-2, protein structure initiative; HET: UDP; 2.95A {Bacillus cereus} | Back alignment and structure |
|---|
Probab=97.02 E-value=0.0079 Score=52.03 Aligned_cols=92 Identities=13% Similarity=0.077 Sum_probs=60.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
.+|||+||+|.+|..+++.+...|.+|+++++++.+.+ +. +.. ++.. +- . .+.+.+... ++|+||++++..
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~-~~---~~~-~~~~-Dl-~-~~~~~~~~~-~~d~Vih~a~~~ 73 (311)
T 3m2p_A 3 LKIAVTGGTGFLGQYVVESIKNDGNTPIILTRSIGNKA-IN---DYE-YRVS-DY-T-LEDLINQLN-DVDAVVHLAATR 73 (311)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCCC---------CCE-EEEC-CC-C-HHHHHHHTT-TCSEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCEEEEEeCCCCccc-CC---ceE-EEEc-cc-c-HHHHHHhhc-CCCEEEEccccC
Confidence 58999999999999999999989999999999855544 33 332 2211 21 3 445555554 699999998841
Q ss_pred --------------hHHHHHHhhhhC--CEEEEEcee
Q 019332 234 --------------MLDAVLLNMKIH--GRIAVCGMI 254 (342)
Q Consensus 234 --------------~~~~~~~~l~~~--G~~v~~g~~ 254 (342)
....+++.++.. .++|.+++.
T Consensus 74 ~~~~~~~~~~~n~~~~~~ll~a~~~~~~~r~v~~SS~ 110 (311)
T 3m2p_A 74 GSQGKISEFHDNEILTQNLYDACYENNISNIVYASTI 110 (311)
T ss_dssp CSSSCGGGTHHHHHHHHHHHHHHHHTTCCEEEEEEEG
T ss_pred CCCChHHHHHHHHHHHHHHHHHHHHcCCCEEEEEccH
Confidence 123445555544 478887763
|
| >2nyu_A Putative ribosomal RNA methyltransferase 2; SAM, structural genomics, structural genomics consortium, SGC; HET: SAM; 1.76A {Homo sapiens} | Back alignment and structure |
|---|
Probab=97.01 E-value=0.004 Score=49.82 Aligned_cols=96 Identities=11% Similarity=0.079 Sum_probs=64.3
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcC----------CEEEEEeCChhhHHHHHHHcCCCeeE---ecCCchhHHHH
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLG----------CYVVGSAGSKDKIDLLKNKFGFDEAF---NYKEEPDLNEA 214 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~g----------a~Vi~~~~s~~~~~~~~~~~g~~~v~---~~~~~~~~~~~ 214 (342)
..++++++||-.|+ |+ |..+..+++..+ .+|++++.++.. .......+ |..+. +..+.
T Consensus 18 ~~~~~~~~vLDlGc-G~-G~~~~~la~~~~~~~~~~~~~~~~v~~vD~s~~~------~~~~~~~~~~~d~~~~-~~~~~ 88 (196)
T 2nyu_A 18 QILRPGLRVLDCGA-AP-GAWSQVAVQKVNAAGTDPSSPVGFVLGVDLLHIF------PLEGATFLCPADVTDP-RTSQR 88 (196)
T ss_dssp CCCCTTCEEEEETC-CS-CHHHHHHHHHTTTTCCCTTSCCCEEEEECSSCCC------CCTTCEEECSCCTTSH-HHHHH
T ss_pred CCCCCCCEEEEeCC-CC-CHHHHHHHHHhccccccccCCCceEEEEechhcc------cCCCCeEEEeccCCCH-HHHHH
Confidence 44788999999995 55 889999999876 789999988743 11111222 22222 34455
Q ss_pred HHHHCCC-CccEEEe-----CCCh-------------hhHHHHHHhhhhCCEEEEEc
Q 019332 215 LKRYFPE-GIDIYFE-----NVGG-------------KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 215 i~~~~~~-~~d~vid-----~~g~-------------~~~~~~~~~l~~~G~~v~~g 252 (342)
+.+...+ .+|+|+. +.+. ..+..+.+.|+++|+++...
T Consensus 89 ~~~~~~~~~fD~V~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~lv~~~ 145 (196)
T 2nyu_A 89 ILEVLPGRRADVILSDMAPNATGFRDLDHDRLISLCLTLLSVTPDILQPGGTFLCKT 145 (196)
T ss_dssp HHHHSGGGCEEEEEECCCCCCCSCHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred HHHhcCCCCCcEEEeCCCCCCCCCcccCHHHHHHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 5555554 7999984 3332 34567788999999998753
|
| >2hnk_A SAM-dependent O-methyltransferase; modified rossman fold; HET: SAH; 2.30A {Leptospira interrogans} | Back alignment and structure |
|---|
Probab=96.98 E-value=0.0015 Score=54.42 Aligned_cols=102 Identities=15% Similarity=0.138 Sum_probs=69.5
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC---
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF--- 219 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~--- 219 (342)
.+..++.+||-.|+ |.|..+..+++.. +.+|++++.+++..+.+++. .|....+..... +..+.+.+..
T Consensus 56 ~~~~~~~~VLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~v~~~~~-d~~~~~~~~~~~~ 132 (239)
T 2hnk_A 56 TKISGAKRIIEIGT--FTGYSSLCFASALPEDGKILCCDVSEEWTNVARKYWKENGLENKIFLKLG-SALETLQVLIDSK 132 (239)
T ss_dssp HHHHTCSEEEEECC--TTCHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHCS
T ss_pred HHhhCcCEEEEEeC--CCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCEEEEEC-CHHHHHHHHHhhc
Confidence 34567889999994 4799999999987 56999999999887777633 354321222222 3333333321
Q ss_pred -----------C-CCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 220 -----------P-EGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 -----------~-~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
. +.+|+|+...+. ..+..+.+.|+++|+++...
T Consensus 133 ~~~~~~~~f~~~~~~fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 181 (239)
T 2hnk_A 133 SAPSWASDFAFGPSSIDLFFLDADKENYPNYYPLILKLLKPGGLLIADN 181 (239)
T ss_dssp SCCGGGTTTCCSTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred ccccccccccCCCCCcCEEEEeCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 1 469999876554 35677889999999998753
|
| >1lss_A TRK system potassium uptake protein TRKA homolog; KTN domain, NAD, RCK domain, potassium transport, potassium channel, KTRA; HET: NAD; 2.30A {Methanocaldococcus jannaschii} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.97 E-value=0.017 Score=43.13 Aligned_cols=76 Identities=18% Similarity=0.142 Sum_probs=53.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-ecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-NYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+.+|+|.|+ |.+|...++.+...|.+|+++++++++.+.+.+.++...+. +..+. +.+.+..-.++|+++.|.+
T Consensus 4 ~m~i~IiG~-G~iG~~~a~~L~~~g~~v~~~d~~~~~~~~~~~~~~~~~~~~d~~~~----~~l~~~~~~~~d~vi~~~~ 78 (140)
T 1lss_A 4 GMYIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDALVINGDCTKI----KTLEDAGIEDADMYIAVTG 78 (140)
T ss_dssp -CEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSEEEESCTTSH----HHHHHTTTTTCSEEEECCS
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHhcCcEEEEcCCCCH----HHHHHcCcccCCEEEEeeC
Confidence 357999997 99999999988888999999999988877776345653221 22221 2233322236999999998
Q ss_pred hh
Q 019332 232 GK 233 (342)
Q Consensus 232 ~~ 233 (342)
..
T Consensus 79 ~~ 80 (140)
T 1lss_A 79 KE 80 (140)
T ss_dssp CH
T ss_pred Cc
Confidence 74
|
| >3hem_A Cyclopropane-fatty-acyl-phospholipid synthase 2; protein-ligand complex, cytoplasm, lipid synthesis, methyltransferase; HET: D22; 2.39A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kpi_A* | Back alignment and structure |
|---|
Probab=96.97 E-value=0.0034 Score=54.18 Aligned_cols=101 Identities=10% Similarity=0.062 Sum_probs=70.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
....++++.+||-.|. |.|..+..+++..|++|++++.+++..+.+++. .|...-+..... ++. +. .+.
T Consensus 66 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~-~~~ 137 (302)
T 3hem_A 66 DKLNLEPGMTLLDIGC--GWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GWE----EF-DEP 137 (302)
T ss_dssp HTTCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEECCHHHHHHHHHHHHHSCCSSCEEEEEC-CGG----GC-CCC
T ss_pred HHcCCCCcCEEEEeec--cCcHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-CHH----Hc-CCC
Confidence 4467889999999994 468999999999899999999999887777632 243211211111 221 12 457
Q ss_pred ccEEEeCCC----------------hhhHHHHHHhhhhCCEEEEEcee
Q 019332 223 IDIYFENVG----------------GKMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 223 ~d~vid~~g----------------~~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+|+|+-... ...+..+.++|+|+|+++.....
T Consensus 138 fD~v~~~~~~~~~~d~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~~ 185 (302)
T 3hem_A 138 VDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHTIT 185 (302)
T ss_dssp CSEEEEESCGGGTTCCSSCCCTTHHHHHHHHHHHSSCTTCEEEEEEEE
T ss_pred ccEEEEcchHHhcCccccccchhHHHHHHHHHHHhcCCCcEEEEEEEe
Confidence 999886432 13567888999999999876553
|
| >2gpy_A O-methyltransferase; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: MSE; 1.90A {Bacillus halodurans} | Back alignment and structure |
|---|
Probab=96.96 E-value=0.001 Score=55.21 Aligned_cols=102 Identities=12% Similarity=0.103 Sum_probs=68.4
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC-CCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF-PEG 222 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~-~~~ 222 (342)
....++.+||-.|+ |.|..++.+++.. +.+|++++.+++..+.+++. .|....+..... +..+.+.... .+.
T Consensus 50 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~~ 126 (233)
T 2gpy_A 50 LKMAAPARILEIGT--AIGYSAIRMAQALPEATIVSIERDERRYEEAHKHVKALGLESRIELLFG-DALQLGEKLELYPL 126 (233)
T ss_dssp HHHHCCSEEEEECC--TTSHHHHHHHHHCTTCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECS-CGGGSHHHHTTSCC
T ss_pred HhccCCCEEEEecC--CCcHHHHHHHHHCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEC-CHHHHHHhcccCCC
Confidence 44567889999995 4788899999887 67999999999888777643 254211222121 2222223332 236
Q ss_pred ccEEEeCCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+|+..... ..+..+.+.|+++|+++...
T Consensus 127 fD~I~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~ 160 (233)
T 2gpy_A 127 FDVLFIDAAKGQYRRFFDMYSPMVRPGGLILSDN 160 (233)
T ss_dssp EEEEEEEGGGSCHHHHHHHHGGGEEEEEEEEEET
T ss_pred ccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEEc
Confidence 9998865553 45677888999999998753
|
| >3mb5_A SAM-dependent methyltransferase; RNA methyltransferase, M1A, TRMI, intermolecular contacts, R specificity, tetramer, disulfide bond; HET: SAM; 1.60A {Pyrococcus abyssi} PDB: 3lga_A* 3lhd_C* | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0026 Score=53.44 Aligned_cols=101 Identities=17% Similarity=0.192 Sum_probs=71.8
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
...++.++++||-.|+ |.|..+..+++.. +.+|++++.+++..+.+++. .|....++.... ++. +...
T Consensus 87 ~~~~~~~~~~vldiG~--G~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~----~~~~ 159 (255)
T 3mb5_A 87 AYAGISPGDFIVEAGV--GSGALTLFLANIVGPEGRVVSYEIREDFAKLAWENIKWAGFDDRVTIKLK-DIY----EGIE 159 (255)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHTCTTTEEEECS-CGG----GCCC
T ss_pred HhhCCCCCCEEEEecC--CchHHHHHHHHHhCCCeEEEEEecCHHHHHHHHHHHHHcCCCCceEEEEC-chh----hccC
Confidence 4567899999999995 3488899999885 56999999999887777633 254321222222 222 1122
Q ss_pred C-CccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 221 E-GIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 ~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
. .+|+|+-.... ..+..+.+.|+++|+++.+..
T Consensus 160 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 195 (255)
T 3mb5_A 160 EENVDHVILDLPQPERVVEHAAKALKPGGFFVAYTP 195 (255)
T ss_dssp CCSEEEEEECSSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCEEEECCCCHHHHHHHHHHHcCCCCEEEEEEC
Confidence 3 69999876665 488999999999999987643
|
| >1nyt_A Shikimate 5-dehydrogenase; alpha/beta domains, WIDE cleft separation, oxidoreductase; HET: NAP; 1.50A {Escherichia coli} SCOP: c.2.1.7 c.58.1.5 | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0039 Score=52.99 Aligned_cols=94 Identities=13% Similarity=0.047 Sum_probs=61.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++.+++|+|+ |++|.++++.+...|++|++..++.++.+.+.++++....++..+. + .+.+ +++|++++|++
T Consensus 118 ~~k~vlViGa-Gg~g~a~a~~L~~~G~~V~v~~R~~~~~~~la~~~~~~~~~~~~~~-~---~~~~---~~~DivVn~t~ 189 (271)
T 1nyt_A 118 PGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D---ELEG---HEFDLIINATS 189 (271)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G---GGTT---CCCSEEEECCS
T ss_pred CCCEEEEECC-cHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHhhccCCeeEecH-H---Hhcc---CCCCEEEECCC
Confidence 5789999997 8999999999999999999999998887665546653111111111 1 1111 46999999999
Q ss_pred hhhHHH----HHHhhhhCCEEEEEce
Q 019332 232 GKMLDA----VLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~~~~~~----~~~~l~~~G~~v~~g~ 253 (342)
...... -...++++..++.+..
T Consensus 190 ~~~~~~~~~i~~~~l~~~~~v~D~~y 215 (271)
T 1nyt_A 190 SGISGDIPAIPSSLIHPGIYCYDMFY 215 (271)
T ss_dssp CGGGTCCCCCCGGGCCTTCEEEESCC
T ss_pred CCCCCCCCCCCHHHcCCCCEEEEecc
Confidence 633210 1123455555655543
|
| >2ydy_A Methionine adenosyltransferase 2 subunit beta; oxidoreductase; 2.25A {Homo sapiens} PDB: 2ydx_A | Back alignment and structure |
|---|
Probab=96.95 E-value=0.0042 Score=53.83 Aligned_cols=92 Identities=12% Similarity=0.158 Sum_probs=51.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+.+|||+||+|.+|..+++.+...|++|++++++..+ . . . ...|..+...+.+.++.. ++|+||+++|.
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~----~-~--~-~~~Dl~d~~~~~~~~~~~---~~d~vih~A~~ 70 (315)
T 2ydy_A 2 NRRVLVTGATGLLGRAVHKEFQQNNWHAVGCGFRRAR----P-K--F-EQVNLLDSNAVHHIIHDF---QPHVIVHCAAE 70 (315)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHTTTCEEEEEC--------------------------CHHHHHHH---CCSEEEECC--
T ss_pred CCeEEEECCCcHHHHHHHHHHHhCCCeEEEEccCCCC----C-C--e-EEecCCCHHHHHHHHHhh---CCCEEEECCcc
Confidence 4589999999999999999888889999999976543 1 1 0 112222221233333322 48999999884
Q ss_pred hh------------------HHHHHHh-hhhCCEEEEEceec
Q 019332 233 KM------------------LDAVLLN-MKIHGRIAVCGMIS 255 (342)
Q Consensus 233 ~~------------------~~~~~~~-l~~~G~~v~~g~~~ 255 (342)
.. ...+++. .+.++++|.+++..
T Consensus 71 ~~~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~~ 112 (315)
T 2ydy_A 71 RRPDVVENQPDAASQLNVDASGNLAKEAAAVGAFLIYISSDY 112 (315)
T ss_dssp -----------------CHHHHHHHHHHHHHTCEEEEEEEGG
T ss_pred cChhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchHH
Confidence 11 1123333 33467998887644
|
| >4iiu_A 3-oxoacyl-[acyl-carrier protein] reductase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAP; 2.10A {Escherichia coli} PDB: 4iiv_A* | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0024 Score=54.07 Aligned_cols=81 Identities=15% Similarity=0.101 Sum_probs=50.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHHH---cCCC-ee--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKNK---FGFD-EA--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~~---~g~~-~v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.+.++||+||+|++|.+.++.+...|++|+++. ++.++.+.+.++ .+.. .+ .|..+..++.+.+.+.. .+.
T Consensus 25 ~~k~vlVTGas~gIG~~la~~l~~~G~~v~i~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dl~~~~~~~~~~~~~~~~~g~ 104 (267)
T 4iiu_A 25 MSRSVLVTGASKGIGRAIARQLAADGFNIGVHYHRDAAGAQETLNAIVANGGNGRLLSFDVANREQCREVLEHEIAQHGA 104 (267)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHCC
T ss_pred CCCEEEEECCCChHHHHHHHHHHHCCCEEEEEeCCchHHHHHHHHHHHhcCCceEEEEecCCCHHHHHHHHHHHHHHhCC
Confidence 357899999999999999999989999987655 555544433322 2322 22 34444422333333221 136
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 105 id~li~nAg~ 114 (267)
T 4iiu_A 105 WYGVVSNAGI 114 (267)
T ss_dssp CSEEEECCCC
T ss_pred ccEEEECCCC
Confidence 9999999883
|
| >2wm3_A NMRA-like family domain containing protein 1; unknown function; HET: NAP NFL; 1.85A {Homo sapiens} PDB: 2wmd_A* 2exx_A* 3dxf_A 3e5m_A | Back alignment and structure |
|---|
Probab=96.94 E-value=0.0061 Score=52.42 Aligned_cols=95 Identities=14% Similarity=0.028 Sum_probs=61.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhH--HHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKI--DLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~--~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
..+|||+||+|.+|..+++.+...| .+|+++++++++. +.+. ..++.. ..|..+. +.+.+... ++|.||.
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~R~~~~~~~~~l~-~~~~~~~~~D~~d~----~~l~~~~~-~~d~vi~ 78 (299)
T 2wm3_A 5 KKLVVVFGGTGAQGGSVARTLLEDGTFKVRVVTRNPRKKAAKELR-LQGAEVVQGDQDDQ----VIMELALN-GAYATFI 78 (299)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHCSSEEEEEESCTTSHHHHHHH-HTTCEEEECCTTCH----HHHHHHHT-TCSEEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhcCCceEEEEEcCCCCHHHHHHH-HCCCEEEEecCCCH----HHHHHHHh-cCCEEEE
Confidence 4689999999999999988887778 8999999987653 2233 345532 2344443 23333333 4999999
Q ss_pred CCCh-h---------hHHHHHHhhhh-C-CEEEEEce
Q 019332 229 NVGG-K---------MLDAVLLNMKI-H-GRIAVCGM 253 (342)
Q Consensus 229 ~~g~-~---------~~~~~~~~l~~-~-G~~v~~g~ 253 (342)
+.+. . ....+++.++. + +++|..+.
T Consensus 79 ~a~~~~~~~~~~~~~~~~~~~~aa~~~gv~~iv~~S~ 115 (299)
T 2wm3_A 79 VTNYWESCSQEQEVKQGKLLADLARRLGLHYVVYSGL 115 (299)
T ss_dssp CCCHHHHTCHHHHHHHHHHHHHHHHHHTCSEEEECCC
T ss_pred eCCCCccccchHHHHHHHHHHHHHHHcCCCEEEEEcC
Confidence 9884 1 12234444443 3 57887554
|
| >3abi_A Putative uncharacterized protein PH1688; L-lysine dehydrogenase, oxidoreductase; HET: NAD; 2.44A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.93 E-value=0.0044 Score=55.16 Aligned_cols=92 Identities=13% Similarity=0.133 Sum_probs=65.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG- 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 232 (342)
-+|+|+|+ |.+|..+++.+.. ..+|.+.+++.++.+.++ +......+|..+. +.+.+... ++|+|++|++.
T Consensus 17 mkilvlGa-G~vG~~~~~~L~~-~~~v~~~~~~~~~~~~~~-~~~~~~~~d~~d~----~~l~~~~~-~~DvVi~~~p~~ 88 (365)
T 3abi_A 17 MKVLILGA-GNIGRAIAWDLKD-EFDVYIGDVNNENLEKVK-EFATPLKVDASNF----DKLVEVMK-EFELVIGALPGF 88 (365)
T ss_dssp CEEEEECC-SHHHHHHHHHHTT-TSEEEEEESCHHHHHHHT-TTSEEEECCTTCH----HHHHHHHT-TCSEEEECCCGG
T ss_pred cEEEEECC-CHHHHHHHHHHhc-CCCeEEEEcCHHHHHHHh-ccCCcEEEecCCH----HHHHHHHh-CCCEEEEecCCc
Confidence 37999998 9999988877743 468999999988887776 4332223454443 23333322 48999999998
Q ss_pred hhHHHHHHhhhhCCEEEEEce
Q 019332 233 KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 233 ~~~~~~~~~l~~~G~~v~~g~ 253 (342)
-....+-.|++.+-+++++..
T Consensus 89 ~~~~v~~~~~~~g~~yvD~s~ 109 (365)
T 3abi_A 89 LGFKSIKAAIKSKVDMVDVSF 109 (365)
T ss_dssp GHHHHHHHHHHHTCEEEECCC
T ss_pred ccchHHHHHHhcCcceEeeec
Confidence 455566678888889998764
|
| >3zu3_A Putative reductase YPO4104/Y4119/YP_4011; oxidoreductase, fatty acid biosynthesis II, short-chain dehydrogenase reductase superfamily; HET: NAI; 1.80A {Yersinia pestis} PDB: 3zu4_A* 3zu5_A* 3zu2_A* | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0032 Score=56.18 Aligned_cols=83 Identities=13% Similarity=0.067 Sum_probs=53.6
Q ss_pred cCC-CCCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChhh----------------HHHHHHHcCCCe-e--EecC
Q 019332 148 CSP-KQGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDK----------------IDLLKNKFGFDE-A--FNYK 206 (342)
Q Consensus 148 ~~~-~~~~~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~~----------------~~~~~~~~g~~~-v--~~~~ 206 (342)
..+ ..+.++||+||++|+|.+.+..+.. .|++|+++.++.++ .+.++ +.|... . .|-.
T Consensus 41 ~~~~~~gKvaLVTGas~GIG~AiA~~LA~g~GA~Vv~~~~~~~~~~~~~~~~gwyn~~~~~~~~~-~~G~~a~~i~~Dvt 119 (405)
T 3zu3_A 41 GPIANGPKRVLVIGASTGYGLAARITAAFGCGADTLGVFFERPGEEGKPGTSGWYNSAAFHKFAA-QKGLYAKSINGDAF 119 (405)
T ss_dssp CCCTTCCSEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCBTTBCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred CCcCCCCCEEEEeCcchHHHHHHHHHHHHhcCCEEEEEeCCchhhhhhcccccchhHHHHHHHHH-hcCCceEEEECCCC
Confidence 444 5678899999999999988877777 89999988765432 11333 455422 1 2333
Q ss_pred Cchh---HHHHHHHHCCCCccEEEeCCCh
Q 019332 207 EEPD---LNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 207 ~~~~---~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+... +.+.+.+.. |++|++++++|.
T Consensus 120 d~~~v~~~v~~i~~~~-G~IDiLVNNAG~ 147 (405)
T 3zu3_A 120 SDEIKQLTIDAIKQDL-GQVDQVIYSLAS 147 (405)
T ss_dssp SHHHHHHHHHHHHHHT-SCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEEcCcc
Confidence 3312 333333333 469999999875
|
| >2et6_A (3R)-hydroxyacyl-COA dehydrogenase; MFE-2, beta-oxidation, peroxisome, SDR, oxido; 2.22A {Candida tropicalis} | Back alignment and structure |
|---|
Probab=96.92 E-value=0.0077 Score=57.32 Aligned_cols=103 Identities=19% Similarity=0.193 Sum_probs=64.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hh-HHHHHHHcCCCeeEecCCc----hhHHHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DK-IDLLKNKFGFDEAFNYKEE----PDLNEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~-~~~~~~~~g~~~v~~~~~~----~~~~~~i~~~~~~~~d~ 225 (342)
.+.++||+||++|+|.+.++.+...|++|++.++.. ++ .+.++ +.|...+...-+- ..+.+.+.+.. |.+|+
T Consensus 321 ~gkvalVTGas~GIG~a~A~~la~~Ga~Vv~~~~~~~~~~~~~i~-~~g~~~~~~~~Dv~~~~~~~~~~~~~~~-G~iDi 398 (604)
T 2et6_A 321 KDKVVLITGAGAGLGKEYAKWFAKYGAKVVVNDFKDATKTVDEIK-AAGGEAWPDQHDVAKDSEAIIKNVIDKY-GTIDI 398 (604)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHHH-SCCCE
T ss_pred CCCeEEEECcchHHHHHHHHHHHHCCCEEEEEeCccHHHHHHHHH-hcCCeEEEEEcChHHHHHHHHHHHHHhc-CCCCE
Confidence 467899999999999999999999999999887432 22 23333 4454322222111 02223333322 36999
Q ss_pred EEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 226 YFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 226 vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
+++++|.. ....+++.++. +|++|.+++..+
T Consensus 399 LVnNAGi~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IVnisS~ag 457 (604)
T 2et6_A 399 LVNNAGILRDRSFAKMSKQEWDSVQQVHLIGTFNLSRLAWPYFVEKQFGRIINITSTSG 457 (604)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCHHH
T ss_pred EEECCCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHHHHHcCCCEEEEECChhh
Confidence 99999831 12345555643 589999987654
|
| >2yut_A Putative short-chain oxidoreductase; alpha and beta proteins (A/B), NAD(P)-binding rossmann-fold structural genomics, NPPSFA; HET: NAP; 2.20A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.002 Score=52.19 Aligned_cols=73 Identities=21% Similarity=0.269 Sum_probs=50.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
++||+||+|++|..+++.+... +|+++++++++.+.+.++++. .. .|..+...+.+.+.+ .+++|++++++|.
T Consensus 2 ~vlVtGasg~iG~~la~~l~~~--~V~~~~r~~~~~~~~~~~~~~-~~~~~D~~~~~~~~~~~~~--~~~id~vi~~ag~ 76 (207)
T 2yut_A 2 RVLITGATGGLGGAFARALKGH--DLLLSGRRAGALAELAREVGA-RALPADLADELEAKALLEE--AGPLDLLVHAVGK 76 (207)
T ss_dssp EEEEETTTSHHHHHHHHHTTTS--EEEEECSCHHHHHHHHHHHTC-EECCCCTTSHHHHHHHHHH--HCSEEEEEECCCC
T ss_pred EEEEEcCCcHHHHHHHHHHHhC--CEEEEECCHHHHHHHHHhccC-cEEEeeCCCHHHHHHHHHh--cCCCCEEEECCCc
Confidence 6899999999999877776555 999999998877766534443 22 344443133333333 2469999999883
|
| >1wwk_A Phosphoglycerate dehydrogenase; riken structural genomics/proteomics initiative, RSGI, structural genomics, oxidoreductase; HET: NAD; 1.90A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0062 Score=52.73 Aligned_cols=88 Identities=20% Similarity=0.190 Sum_probs=66.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|+|. |.+|...++.++.+|++|++..++.++ +.+. ++|+... ++.+.+++ .|+|+.+.
T Consensus 140 l~g~~vgIiG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~ 204 (307)
T 1wwk_A 140 LEGKTIGIIGF-GRIGYQVAKIANALGMNILLYDPYPNE-ERAK-EVNGKFV-------DLETLLKE-----SDVVTIHV 204 (307)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HTTCEEC-------CHHHHHHH-----CSEEEECC
T ss_pred cCCceEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCCCh-hhHh-hcCcccc-------CHHHHHhh-----CCEEEEec
Confidence 35789999996 999999999999999999999988776 5555 7776321 33333432 79999887
Q ss_pred Ch-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 231 GG-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
.. + .+ ...+..+++++.++.++.
T Consensus 205 p~~~~t~~li~~~~l~~mk~ga~lin~ar 233 (307)
T 1wwk_A 205 PLVESTYHLINEERLKLMKKTAILINTSR 233 (307)
T ss_dssp CCSTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred CCChHHhhhcCHHHHhcCCCCeEEEECCC
Confidence 74 2 12 456788999999998876
|
| >1ek6_A UDP-galactose 4-epimerase; short-chain dehydrogenase, galactosemia, isomerase; HET: NAI UPG; 1.50A {Homo sapiens} SCOP: c.2.1.2 PDB: 1ek5_A* 1hzj_A* 1i3k_A* 1i3l_A* 1i3m_A* 1i3n_A* | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0066 Score=53.36 Aligned_cols=76 Identities=16% Similarity=0.169 Sum_probs=48.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh----------hhHHHHHHHcCCC-ee--EecCCchhHHHHHHHHCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----------DKIDLLKNKFGFD-EA--FNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~----------~~~~~~~~~~g~~-~v--~~~~~~~~~~~~i~~~~~ 220 (342)
.+|||+||+|.+|..+++.+...|++|++++++. +..+.+.+..+.. .+ .|..+...+.+.+.+.
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~r~~~~~~~~~~~l~~~~~~~~~~~~~D~~~~~~~~~~~~~~-- 80 (348)
T 1ek6_A 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVIDNFHNAFRGGGSLPESLRRVQELTGRSVEFEEMDILDQGALQRLFKKY-- 80 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEECSSSSCBCSSSSBHHHHHHHHHHTCCCEEEECCTTCHHHHHHHHHHC--
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCcccccccccHHHHHHHHhccCCceEEEECCCCCHHHHHHHHHhc--
Confidence 5899999999999999988888899999998643 2233333112321 22 3444431233333321
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
++|+||+++|.
T Consensus 81 -~~d~vih~A~~ 91 (348)
T 1ek6_A 81 -SFMAVIHFAGL 91 (348)
T ss_dssp -CEEEEEECCSC
T ss_pred -CCCEEEECCCC
Confidence 59999999884
|
| >2gas_A Isoflavone reductase; NADPH-dependent reductase, oxidoreductase; 1.60A {Medicago sativa} | Back alignment and structure |
|---|
Probab=96.91 E-value=0.0044 Score=53.47 Aligned_cols=92 Identities=16% Similarity=0.184 Sum_probs=59.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-------hhHHHHHH--HcCCCe-eEecCCchhHHHHHHHHCCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-------DKIDLLKN--KFGFDE-AFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~i~~~~~~~ 222 (342)
+.+|||+||+|.+|...++.+...|.+|++++++. ++.+.+++ ..++.. ..|..+. +.+.+... +
T Consensus 2 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~----~~l~~~~~-~ 76 (307)
T 2gas_A 2 ENKILILGPTGAIGRHIVWASIKAGNPTYALVRKTITAANPETKEELIDNYQSLGVILLEGDINDH----ETLVKAIK-Q 76 (307)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHHTCCEEEEECCSCCSSCHHHHHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-T
T ss_pred CcEEEEECCCchHHHHHHHHHHhCCCcEEEEECCCcccCChHHHHHHHHHHHhCCCEEEEeCCCCH----HHHHHHHh-C
Confidence 35799999999999999988888899999999886 55443330 235432 2344443 23333333 4
Q ss_pred ccEEEeCCCh---hhHHHHHHhhhhC---CEEE
Q 019332 223 IDIYFENVGG---KMLDAVLLNMKIH---GRIA 249 (342)
Q Consensus 223 ~d~vid~~g~---~~~~~~~~~l~~~---G~~v 249 (342)
+|+||++++. .....+++.++.. ++++
T Consensus 77 ~d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 109 (307)
T 2gas_A 77 VDIVICAAGRLLIEDQVKIIKAIKEAGNVKKFF 109 (307)
T ss_dssp CSEEEECSSSSCGGGHHHHHHHHHHHCCCSEEE
T ss_pred CCEEEECCcccccccHHHHHHHHHhcCCceEEe
Confidence 9999999985 2334455555443 4666
|
| >3u0b_A Oxidoreductase, short chain dehydrogenase/reducta protein; structural genomics, ssgcid; 1.70A {Mycobacterium smegmatis} PDB: 3lls_A 3v1t_C 3v1u_A* 4fw8_A* 3q6i_A* 3m1l_A | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0059 Score=55.98 Aligned_cols=81 Identities=15% Similarity=0.249 Sum_probs=53.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCCe-eEecCCchh---HHHHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFDE-AFNYKEEPD---LNEALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~~-v~~~~~~~~---~~~~i~~~~~~~~d~ 225 (342)
++.++||+|++|++|.+.++.+...|++|+++.++... .+.+.++.+... ..|-.+... +.+.+.+..++.+|+
T Consensus 212 ~gk~~LVTGgsgGIG~aiA~~La~~Ga~Vvl~~r~~~~~~l~~~~~~~~~~~~~~Dvtd~~~v~~~~~~~~~~~g~~id~ 291 (454)
T 3u0b_A 212 DGKVAVVTGAARGIGATIAEVFARDGATVVAIDVDGAAEDLKRVADKVGGTALTLDVTADDAVDKITAHVTEHHGGKVDI 291 (454)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEECGGGHHHHHHHHHHHTCEEEECCTTSTTHHHHHHHHHHHHSTTCCSE
T ss_pred CCCEEEEeCCchHHHHHHHHHHHHCCCEEEEEeCCccHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHHcCCCceE
Confidence 57799999999999999888888889999999876432 222222555532 234444312 333333433335999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 292 lV~nAGv 298 (454)
T 3u0b_A 292 LVNNAGI 298 (454)
T ss_dssp EEECCCC
T ss_pred EEECCcc
Confidence 9999983
|
| >4ina_A Saccharopine dehydrogenase; structural genomics, PSI-biology, northeast structural genom consortium, NESG, oxidoreductas; 2.49A {Wolinella succinogenes} | Back alignment and structure |
|---|
Probab=96.90 E-value=0.0081 Score=54.22 Aligned_cols=95 Identities=12% Similarity=0.053 Sum_probs=66.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC---CEEEEEeCChhhHHHHHHHcC------CC-eeEecCCchhHHHHHHHHCCCCcc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKIDLLKNKFG------FD-EAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g---a~Vi~~~~s~~~~~~~~~~~g------~~-~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
+|+|+|+ |++|..+++.+...| .+|++.+++.++.+.+.++++ .. ..+|..+..++.+.+++. ++|
T Consensus 3 kVlIiGa-GgiG~~ia~~L~~~g~~~~~V~v~~r~~~~~~~la~~l~~~~~~~~~~~~~D~~d~~~l~~~l~~~---~~D 78 (405)
T 4ina_A 3 KVLQIGA-GGVGGVVAHKMAMNREVFSHITLASRTLSKCQEIAQSIKAKGYGEIDITTVDADSIEELVALINEV---KPQ 78 (405)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCTTTCCEEEEEESCHHHHHHHHHHHHHTTCCCCEEEECCTTCHHHHHHHHHHH---CCS
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCceEEEEEECCHHHHHHHHHHhhhhcCCceEEEEecCCCHHHHHHHHHhh---CCC
Confidence 7999998 999999998887777 499999999988776654543 21 123444432344444432 589
Q ss_pred EEEeCCCh-hhHHHHHHhhhhCCEEEEEce
Q 019332 225 IYFENVGG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 225 ~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|++|++. ........|++.+-.++.+..
T Consensus 79 vVin~ag~~~~~~v~~a~l~~g~~vvD~a~ 108 (405)
T 4ina_A 79 IVLNIALPYQDLTIMEACLRTGVPYLDTAN 108 (405)
T ss_dssp EEEECSCGGGHHHHHHHHHHHTCCEEESSC
T ss_pred EEEECCCcccChHHHHHHHHhCCCEEEecC
Confidence 99999997 445566678888888886543
|
| >1p91_A Ribosomal RNA large subunit methyltransferase A; RLMA, RRMA, 23S rRNA, NESG, structural genomics, PSI, protein structure initiative; HET: SAM; 2.80A {Escherichia coli} SCOP: c.66.1.33 | Back alignment and structure |
|---|
Probab=96.89 E-value=0.0021 Score=54.43 Aligned_cols=94 Identities=16% Similarity=0.069 Sum_probs=68.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.++.+||..|. |. |..+..+++.. +.+|++++.+++..+.++ +.+.. .++..+.. ++ ....+.+|+|+.
T Consensus 84 ~~~~~vLdiG~-G~-G~~~~~l~~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~d~~-~~-----~~~~~~fD~v~~ 154 (269)
T 1p91_A 84 DKATAVLDIGC-GE-GYYTHAFADALPEITTFGLDVSKVAIKAAA-KRYPQVTFCVASSH-RL-----PFSDTSMDAIIR 154 (269)
T ss_dssp TTCCEEEEETC-TT-STTHHHHHHTCTTSEEEEEESCHHHHHHHH-HHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred CCCCEEEEECC-CC-CHHHHHHHHhCCCCeEEEEeCCHHHHHHHH-HhCCCcEEEEcchh-hC-----CCCCCceeEEEE
Confidence 67889999995 55 99999999886 789999999999888888 54432 22222111 11 012236999996
Q ss_pred CCChhhHHHHHHhhhhCCEEEEEce
Q 019332 229 NVGGKMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G~~v~~g~ 253 (342)
......+..+.+.|+++|+++....
T Consensus 155 ~~~~~~l~~~~~~L~pgG~l~~~~~ 179 (269)
T 1p91_A 155 IYAPCKAEELARVVKPGGWVITATP 179 (269)
T ss_dssp ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred eCChhhHHHHHHhcCCCcEEEEEEc
Confidence 5555788999999999999987654
|
| >3i6i_A Putative leucoanthocyanidin reductase 1; rossmann fold, short chain dehydrogenase reductase, flavonoi oxidoreductase; HET: NDP; 1.75A {Vitis vinifera} PDB: 3i5m_A 3i52_A* 3i6q_A* | Back alignment and structure |
|---|
Probab=96.88 E-value=0.0033 Score=55.44 Aligned_cols=94 Identities=27% Similarity=0.226 Sum_probs=61.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh----hhHHHHHH--HcCCCe-eEecCCchhHHHHHHHHCCCCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKIDLLKN--KFGFDE-AFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~----~~~~~~~~--~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
.+|||+||+|.+|..+++.+...|.+|++++++. ++.+.+.. ..++.. ..|..+...+.+.+++ .++|+|
T Consensus 11 ~~IlVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~l~~~~v~~~~~Dl~d~~~l~~~~~~---~~~d~V 87 (346)
T 3i6i_A 11 GRVLIAGATGFIGQFVATASLDAHRPTYILARPGPRSPSKAKIFKALEDKGAIIVYGLINEQEAMEKILKE---HEIDIV 87 (346)
T ss_dssp CCEEEECTTSHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHHHHHHHHHTTCEEEECCTTCHHHHHHHHHH---TTCCEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCCCCEEEEECCCCCChhHHHHHHHHHhCCcEEEEeecCCHHHHHHHHhh---CCCCEE
Confidence 5799999999999999999888899999999876 44443331 234432 2344443233333332 159999
Q ss_pred EeCCChh---hHHHHHHhhhhCC---EEEE
Q 019332 227 FENVGGK---MLDAVLLNMKIHG---RIAV 250 (342)
Q Consensus 227 id~~g~~---~~~~~~~~l~~~G---~~v~ 250 (342)
|.+++.. ....+++.++..| +++.
T Consensus 88 i~~a~~~n~~~~~~l~~aa~~~g~v~~~v~ 117 (346)
T 3i6i_A 88 VSTVGGESILDQIALVKAMKAVGTIKRFLP 117 (346)
T ss_dssp EECCCGGGGGGHHHHHHHHHHHCCCSEEEC
T ss_pred EECCchhhHHHHHHHHHHHHHcCCceEEee
Confidence 9999962 3345556655544 5553
|
| >3slg_A PBGP3 protein; structural genomics, seattle structural genomics center for infectious disease, ssgcid, melioidosis, glanders; 2.10A {Burkholderia pseudomallei} | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0044 Score=55.14 Aligned_cols=75 Identities=15% Similarity=0.087 Sum_probs=50.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCe-eEecC-CchhHHHHHHHHCCCCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYK-EEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~-~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+.+|||+||+|.+|..+++.+... |.+|++++++.++...+.+..+... ..|.. +...+.+.++ ++|+||.+
T Consensus 24 ~~~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~v~~~~~Dl~~d~~~~~~~~~-----~~d~Vih~ 98 (372)
T 3slg_A 24 AKKVLILGVNGFIGHHLSKRILETTDWEVFGMDMQTDRLGDLVKHERMHFFEGDITINKEWVEYHVK-----KCDVILPL 98 (372)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHHSSCEEEEEESCCTTTGGGGGSTTEEEEECCTTTCHHHHHHHHH-----HCSEEEEC
T ss_pred CCEEEEECCCChHHHHHHHHHHhCCCCEEEEEeCChhhhhhhccCCCeEEEeCccCCCHHHHHHHhc-----cCCEEEEc
Confidence 468999999999999988888776 8999999998776544331122221 23444 3312222332 49999998
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
++.
T Consensus 99 A~~ 101 (372)
T 3slg_A 99 VAI 101 (372)
T ss_dssp BCC
T ss_pred Ccc
Confidence 884
|
| >3e05_A Precorrin-6Y C5,15-methyltransferase (decarboxyla; porphyrin metabolism, S-adenosyl-methionine; 1.80A {Geobacter metallireducens} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.87 E-value=0.0046 Score=49.92 Aligned_cols=100 Identities=15% Similarity=0.170 Sum_probs=69.2
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHH---cCCCe--eEecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNK---FGFDE--AFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~---~g~~~--v~~~~~~~~~~~~i~~~~ 219 (342)
...+++++++||-.|+ | .|..++.+++.. +.+|++++.+++..+.+++. .|.+. ++..+ ..+.+..
T Consensus 34 ~~l~~~~~~~vLDiG~-G-~G~~~~~la~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~d----~~~~~~~-- 105 (204)
T 3e05_A 34 SKLRLQDDLVMWDIGA-G-SASVSIEASNLMPNGRIFALERNPQYLGFIRDNLKKFVARNVTLVEAF----APEGLDD-- 105 (204)
T ss_dssp HHTTCCTTCEEEEETC-T-TCHHHHHHHHHCTTSEEEEEECCHHHHHHHHHHHHHHTCTTEEEEECC----TTTTCTT--
T ss_pred HHcCCCCCCEEEEECC-C-CCHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHHHHhCCCcEEEEeCC----hhhhhhc--
Confidence 4467889999999995 3 588899999886 36999999999888777632 34422 22221 1111111
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PEGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+|+|+..... ..+..+.+.|+++|+++....
T Consensus 106 ~~~~D~i~~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 143 (204)
T 3e05_A 106 LPDPDRVFIGGSGGMLEEIIDAVDRRLKSEGVIVLNAV 143 (204)
T ss_dssp SCCCSEEEESCCTTCHHHHHHHHHHHCCTTCEEEEEEC
T ss_pred CCCCCEEEECCCCcCHHHHHHHHHHhcCCCeEEEEEec
Confidence 1359999877652 577888999999999987643
|
| >1sb8_A WBPP; epimerase, 4-epimerase, UDP-galnac, UDP-GLCNAC, SDR, G SYK, UDP, N-acetylglucosamine, N- acetylgalactosamine, UDP-GLC, isomerase; HET: NAD UD2; 2.10A {Pseudomonas aeruginosa} SCOP: c.2.1.2 PDB: 1sb9_A* | Back alignment and structure |
|---|
Probab=96.86 E-value=0.019 Score=50.50 Aligned_cols=75 Identities=15% Similarity=0.170 Sum_probs=49.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh----hHHHHHHHc------CCCe-eEecCCchhHHHHHHHHCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD----KIDLLKNKF------GFDE-AFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~----~~~~~~~~~------g~~~-v~~~~~~~~~~~~i~~~~~~ 221 (342)
+.+|||+||+|.+|..+++.+...|.+|++++++.. +.+.+.+.+ +... ..|..+. +.+.+...
T Consensus 27 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Dl~d~----~~~~~~~~- 101 (352)
T 1sb8_A 27 PKVWLITGVAGFIGSNLLETLLKLDQKVVGLDNFATGHQRNLDEVRSLVSEKQWSNFKFIQGDIRNL----DDCNNACA- 101 (352)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCHHHHHHHHHHSCHHHHTTEEEEECCTTSH----HHHHHHHT-
T ss_pred CCeEEEECCCcHHHHHHHHHHHHCCCEEEEEeCCCccchhhHHHHhhhcccccCCceEEEECCCCCH----HHHHHHhc-
Confidence 468999999999999999988888999999998653 233332122 2111 1233332 23333332
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|+||+++|.
T Consensus 102 ~~d~vih~A~~ 112 (352)
T 1sb8_A 102 GVDYVLHQAAL 112 (352)
T ss_dssp TCSEEEECCSC
T ss_pred CCCEEEECCcc
Confidence 59999999984
|
| >1jtv_A 17 beta-hydroxysteroid dehydrogenase type 1; steroid hormones, alternative binding mode, oxidoreductase; HET: TES; 1.54A {Homo sapiens} SCOP: c.2.1.2 PDB: 1dht_A* 1equ_A* 1bhs_A* 1i5r_A* 1qyv_A* 1qyw_A* 1qyx_A* 3dey_X* 3dhe_A* 3hb4_X* 3hb5_X* 3klp_X* 3km0_A* 1iol_A* 1fds_A* 1fdt_A* 3klm_X* 1fdw_A* 1fdu_A* 1fdv_A* ... | Back alignment and structure |
|---|
Probab=96.86 E-value=0.001 Score=58.37 Aligned_cols=78 Identities=14% Similarity=0.142 Sum_probs=50.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH----HHHHHHcC------CC-e--eEecCCchhHHHHHHHHC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI----DLLKNKFG------FD-E--AFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~----~~~~~~~g------~~-~--v~~~~~~~~~~~~i~~~~ 219 (342)
+.++||+|++|++|.+++..+...|++|+.+.++.++. +.++ ..+ .. . ..|..+..++.+.+.+..
T Consensus 2 ~k~vlVTGas~GIG~ala~~L~~~G~~v~~v~r~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~Dv~d~~~v~~~~~~~~ 80 (327)
T 1jtv_A 2 RTVVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWE-AARALACPPGSLETLQLDVRDSKSVAAARERVT 80 (327)
T ss_dssp CEEEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHH-HHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCT
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCceEEEEeecCcHHHHHHHHH-HhhhccCCCCceEEEEecCCCHHHHHHHHHHHh
Confidence 56899999999999999999988999887776543321 2222 221 21 1 234444423444444443
Q ss_pred CCCccEEEeCCC
Q 019332 220 PEGIDIYFENVG 231 (342)
Q Consensus 220 ~~~~d~vid~~g 231 (342)
.+.+|++++++|
T Consensus 81 ~g~iD~lVnnAG 92 (327)
T 1jtv_A 81 EGRVDVLVCNAG 92 (327)
T ss_dssp TSCCSEEEECCC
T ss_pred cCCCCEEEECCC
Confidence 347999999987
|
| >4eue_A Putative reductase CA_C0462; TER, biofuel, synthetic biology, catalytic mechan substrate specificity, oxidoreductase; HET: NAI; 2.00A {Clostridium acetobutylicum} PDB: 4euf_A* 4euh_A* | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0049 Score=55.64 Aligned_cols=83 Identities=16% Similarity=0.133 Sum_probs=51.9
Q ss_pred cCCCCCCEEEEecCCcHHHHH--HHHHHHHcCCEEEEEeCChhh---------------HH-HHHHHcCCCe---eEecC
Q 019332 148 CSPKQGECVFISAASGAVGQL--VGQFAKLLGCYVVGSAGSKDK---------------ID-LLKNKFGFDE---AFNYK 206 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~--ai~la~~~ga~Vi~~~~s~~~---------------~~-~~~~~~g~~~---v~~~~ 206 (342)
..+..+.++||+||++|+|++ .+......|++|+++.++..+ .+ .++ +.|... ..|-.
T Consensus 55 ~~~~~gK~aLVTGassGIG~A~aia~ala~~Ga~Vi~~~r~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~~~~~~~~Dvt 133 (418)
T 4eue_A 55 IGFRGPKKVLIVGASSGFGLATRISVAFGGPEAHTIGVSYETGATDRRIGTAGWYNNIFFKEFAK-KKGLVAKNFIEDAF 133 (418)
T ss_dssp CCCCCCSEEEEESCSSHHHHHHHHHHHHSSSCCEEEEEECCCCCCSSCCCCHHHHHHHHHHHHHH-HTTCCEEEEESCTT
T ss_pred CcCCCCCEEEEECCCcHHHHHHHHHHHHHhCCCEEEEEecCcchhhhcccccccchHHHHHHHHH-HcCCcEEEEEeeCC
Confidence 445788999999999999998 444444559999999875421 22 223 455431 13444
Q ss_pred Cchh---HHHHHHHHCCCCccEEEeCCCh
Q 019332 207 EEPD---LNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 207 ~~~~---~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+... +.+.+.+.. |.+|++++++|.
T Consensus 134 d~~~v~~~v~~i~~~~-G~IDiLVnNAG~ 161 (418)
T 4eue_A 134 SNETKDKVIKYIKDEF-GKIDLFVYSLAA 161 (418)
T ss_dssp CHHHHHHHHHHHHHTT-CCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHHHc-CCCCEEEECCcc
Confidence 4312 233333322 469999998875
|
| >2q1w_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, sugar binding protein; HET: NAD; 2.19A {Bordetella bronchiseptica} | Back alignment and structure |
|---|
Probab=96.84 E-value=0.0022 Score=56.21 Aligned_cols=100 Identities=18% Similarity=0.159 Sum_probs=60.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHc-CCC-eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI-DLLKNKF-GFD-EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~-~~~~~~~-g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+|||+||+|.+|..+++.+...|++|++++++..+. +.+. .+ +.. ...|..+...+.+.++. +.+|+||+
T Consensus 20 ~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~---~~~D~vih 95 (333)
T 2q1w_A 20 HMKKVFITGICGQIGSHIAELLLERGDKVVGIDNFATGRREHLK-DHPNLTFVEGSIADHALVNQLIGD---LQPDAVVH 95 (333)
T ss_dssp -CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCGGGSC-CCTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred CCCEEEEeCCccHHHHHHHHHHHHCCCEEEEEECCCccchhhHh-hcCCceEEEEeCCCHHHHHHHHhc---cCCcEEEE
Confidence 356899999999999999998888899999999875421 1111 11 111 11244443122233322 15999999
Q ss_pred CCCh-hh--------------HHHHHHhhhh-C-CEEEEEceec
Q 019332 229 NVGG-KM--------------LDAVLLNMKI-H-GRIAVCGMIS 255 (342)
Q Consensus 229 ~~g~-~~--------------~~~~~~~l~~-~-G~~v~~g~~~ 255 (342)
++|. .. ...+++.+.+ + +++|.+++..
T Consensus 96 ~A~~~~~~~~~~~~~~~N~~~~~~l~~a~~~~~~~~iV~~SS~~ 139 (333)
T 2q1w_A 96 TAASYKDPDDWYNDTLTNCVGGSNVVQAAKKNNVGRFVYFQTAL 139 (333)
T ss_dssp CCCCCSCTTCHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEEGG
T ss_pred CceecCCCccCChHHHHHHHHHHHHHHHHHHhCCCEEEEECcHH
Confidence 9884 11 1233344433 3 5899888744
|
| >3cea_A MYO-inositol 2-dehydrogenase; NP_786804.1, oxidoreductase FA NAD-binding rossmann fold, structural genomics; HET: NAD; 2.40A {Lactobacillus plantarum WCFS1} | Back alignment and structure |
|---|
Probab=96.82 E-value=0.044 Score=48.17 Aligned_cols=87 Identities=16% Similarity=0.234 Sum_probs=58.9
Q ss_pred CEEEEecCCcHHHHHHHHHHH-H-cCCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAK-L-LGCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~-~-~ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-+|.|+|+ |.+|...++.++ . .+++++++ ++++++.+.+.+++|...+++ ++.+.+. ...+|+|+.|+
T Consensus 9 ~~v~iiG~-G~ig~~~~~~l~~~~~~~~~vav~d~~~~~~~~~a~~~g~~~~~~-----~~~~~l~---~~~~D~V~i~t 79 (346)
T 3cea_A 9 LRAAIIGL-GRLGERHARHLVNKIQGVKLVAACALDSNQLEWAKNELGVETTYT-----NYKDMID---TENIDAIFIVA 79 (346)
T ss_dssp EEEEEECC-STTHHHHHHHHHHTCSSEEEEEEECSCHHHHHHHHHTTCCSEEES-----CHHHHHT---TSCCSEEEECS
T ss_pred ceEEEEcC-CHHHHHHHHHHHhcCCCcEEEEEecCCHHHHHHHHHHhCCCcccC-----CHHHHhc---CCCCCEEEEeC
Confidence 47999997 999998777766 4 46776654 556667665553678754432 3333332 12699999999
Q ss_pred Ch-hhHHHHHHhhhhCCEEE
Q 019332 231 GG-KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 231 g~-~~~~~~~~~l~~~G~~v 249 (342)
.. ...+.+..+|+.+-.++
T Consensus 80 p~~~h~~~~~~al~~G~~v~ 99 (346)
T 3cea_A 80 PTPFHPEMTIYAMNAGLNVF 99 (346)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred ChHhHHHHHHHHHHCCCEEE
Confidence 98 56777888888765544
|
| >2fk8_A Methoxy mycolic acid synthase 4; S-adenosylmethionine-dependent methyltransferase fold, trans; HET: SAM; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 2fk7_A* 3ha3_A* 3ha5_A* 3ha7_A* | Back alignment and structure |
|---|
Probab=96.82 E-value=0.0041 Score=54.12 Aligned_cols=100 Identities=14% Similarity=0.159 Sum_probs=68.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
+...+.++.+||-.|. |.|..+..+++..|++|++++.+++..+.+++.+ |....+..... ++ .+. .+.
T Consensus 84 ~~~~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~----~~~-~~~ 155 (318)
T 2fk8_A 84 DKLDLKPGMTLLDIGC--GWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----EDF-AEP 155 (318)
T ss_dssp TTSCCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GGC-CCC
T ss_pred HhcCCCCcCEEEEEcc--cchHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCceEEEEC-Ch----HHC-CCC
Confidence 4456789999999995 4488889999888999999999998888777332 33211211111 21 111 246
Q ss_pred ccEEEeC-----CCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFEN-----VGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~-----~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+|+.. .+. ..+..+.++|+|+|+++....
T Consensus 156 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 195 (318)
T 2fk8_A 156 VDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQSS 195 (318)
T ss_dssp CSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred cCEEEEeChHHhcCHHHHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9999865 331 356788899999999987654
|
| >1rpn_A GDP-mannose 4,6-dehydratase; short-chain dehydrogenase/reductase, rossmann fold, lyase; HET: NDP GDP; 2.15A {Pseudomonas aeruginosa} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.81 E-value=0.002 Score=56.45 Aligned_cols=80 Identities=10% Similarity=0.120 Sum_probs=49.9
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHcC----CCe-eEecCCchhHHHHHHHHCCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI--DLLKNKFG----FDE-AFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~--~~~~~~~g----~~~-v~~~~~~~~~~~~i~~~~~~ 221 (342)
.-+++.+|||+||+|.+|..+++.+...|.+|++++++..+. ..+. .+. ... ..|..+...+.+.++..
T Consensus 10 ~~~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~--- 85 (335)
T 1rpn_A 10 HGSMTRSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA--- 85 (335)
T ss_dssp -----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---
T ss_pred ccccCCeEEEECCCChHHHHHHHHHHHCCCeEEEEeCCCccccccchh-hccccCceEEEECCCCCHHHHHHHHHHc---
Confidence 457889999999999999999998888899999999876531 2233 331 111 12433331233333322
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|+||.++|.
T Consensus 86 ~~d~Vih~A~~ 96 (335)
T 1rpn_A 86 QPQEVYNLAAQ 96 (335)
T ss_dssp CCSEEEECCSC
T ss_pred CCCEEEECccc
Confidence 58999999884
|
| >3lbf_A Protein-L-isoaspartate O-methyltransferase; modified rossman-type fold, S-adenosyl-L- methionine; HET: SAH; 1.80A {Escherichia coli} | Back alignment and structure |
|---|
Probab=96.81 E-value=0.0018 Score=52.57 Aligned_cols=100 Identities=11% Similarity=0.055 Sum_probs=67.3
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
....++++++||-.|+ |.|..+..+++. +.+|++++.+++..+.+++. .+... +..... +..+.... .+.
T Consensus 71 ~~l~~~~~~~vLdiG~--G~G~~~~~la~~-~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~~--~~~ 143 (210)
T 3lbf_A 71 ELLELTPQSRVLEIGT--GSGYQTAILAHL-VQHVCSVERIKGLQWQARRRLKNLDLHN-VSTRHG-DGWQGWQA--RAP 143 (210)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGGCCGG--GCC
T ss_pred HhcCCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEecCHHHHHHHHHHHHHcCCCc-eEEEEC-CcccCCcc--CCC
Confidence 4467889999999995 368888888888 78999999999888777643 24332 111111 11111111 236
Q ss_pred ccEEEeCCCh-hhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENVGG-KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+|+....- .....+.+.|+++|+++..-
T Consensus 144 ~D~i~~~~~~~~~~~~~~~~L~pgG~lv~~~ 174 (210)
T 3lbf_A 144 FDAIIVTAAPPEIPTALMTQLDEGGILVLPV 174 (210)
T ss_dssp EEEEEESSBCSSCCTHHHHTEEEEEEEEEEE
T ss_pred ccEEEEccchhhhhHHHHHhcccCcEEEEEE
Confidence 9999986654 34457889999999987653
|
| >2axq_A Saccharopine dehydrogenase; rossmann fold variant, saccharopine reductase fold (domain II), alpha/beta protein; 1.70A {Saccharomyces cerevisiae} | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0085 Score=55.03 Aligned_cols=95 Identities=14% Similarity=0.147 Sum_probs=63.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+.+|+|+|+ |++|.+++..+... +.+|++..++.++.+.+.+..+... .+|..+..++.+.+. ++|+|++|
T Consensus 22 ~~k~VlIiGA-GgiG~aia~~L~~~~g~~V~v~~R~~~ka~~la~~~~~~~~~~D~~d~~~l~~~l~-----~~DvVIn~ 95 (467)
T 2axq_A 22 MGKNVLLLGS-GFVAQPVIDTLAANDDINVTVACRTLANAQALAKPSGSKAISLDVTDDSALDKVLA-----DNDVVISL 95 (467)
T ss_dssp -CEEEEEECC-STTHHHHHHHHHTSTTEEEEEEESSHHHHHHHHGGGTCEEEECCTTCHHHHHHHHH-----TSSEEEEC
T ss_pred CCCEEEEECC-hHHHHHHHHHHHhCCCCeEEEEECCHHHHHHHHHhcCCcEEEEecCCHHHHHHHHc-----CCCEEEEC
Confidence 3568999997 99999988888776 6799999999888776652334321 234433212333332 48999999
Q ss_pred CChh-hHHHHHHhhhhCCEEEEEc
Q 019332 230 VGGK-MLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 230 ~g~~-~~~~~~~~l~~~G~~v~~g 252 (342)
++.. .......+++++-.++...
T Consensus 96 tp~~~~~~v~~a~l~~g~~vvd~~ 119 (467)
T 2axq_A 96 IPYTFHPNVVKSAIRTKTDVVTSS 119 (467)
T ss_dssp SCGGGHHHHHHHHHHHTCEEEECS
T ss_pred CchhhhHHHHHHHHhcCCEEEEee
Confidence 9974 3333455777777777653
|
| >1qyd_A Pinoresinol-lariciresinol reductase; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.50A {Thuja plicata} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.80 E-value=0.0079 Score=51.99 Aligned_cols=91 Identities=18% Similarity=0.224 Sum_probs=59.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-----hhhHHHHHH--HcCCCe-eEecCCchhHHHHHHHHCCCCccE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-----KDKIDLLKN--KFGFDE-AFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-----~~~~~~~~~--~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
.+|||+||+|.+|...++.+...|.+|++++++ +++.+.+.. ..++.. ..|..+. +.+.+... ++|+
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~----~~l~~~~~-~~d~ 79 (313)
T 1qyd_A 5 SRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPEVVSNIDKVQMLLYFKQLGAKLIEASLDDH----QRLVDALK-QVDV 79 (313)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSCCSSCHHHHHHHHHHHTTTCEEECCCSSCH----HHHHHHHT-TCSE
T ss_pred CEEEEEcCCcHHHHHHHHHHHhCCCcEEEEECCCcccchhHHHHHHHHHhCCeEEEeCCCCCH----HHHHHHHh-CCCE
Confidence 579999999999999999888889999999987 344443330 224321 2344443 23333333 4999
Q ss_pred EEeCCChh-------hHHHHHHhhhhCC---EEE
Q 019332 226 YFENVGGK-------MLDAVLLNMKIHG---RIA 249 (342)
Q Consensus 226 vid~~g~~-------~~~~~~~~l~~~G---~~v 249 (342)
||.+++.. ....+++.++..| ++|
T Consensus 80 vi~~a~~~~~~~~~~~~~~l~~aa~~~g~v~~~v 113 (313)
T 1qyd_A 80 VISALAGGVLSHHILEQLKLVEAIKEAGNIKRFL 113 (313)
T ss_dssp EEECCCCSSSSTTTTTHHHHHHHHHHSCCCSEEE
T ss_pred EEECCccccchhhHHHHHHHHHHHHhcCCCceEE
Confidence 99998742 3345556555544 776
|
| >1y1p_A ARII, aldehyde reductase II; rossmann fold, short chain dehydrogenase reductase, oxidoreductase; HET: NMN AMP; 1.60A {Sporidiobolus salmonicolor} SCOP: c.2.1.2 PDB: 1ujm_A* 1zze_A | Back alignment and structure |
|---|
Probab=96.79 E-value=0.0032 Score=55.20 Aligned_cols=100 Identities=18% Similarity=0.108 Sum_probs=64.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCC-ee---EecCCchhHHHHHHHHCCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFD-EA---FNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~-~v---~~~~~~~~~~~~i~~~~~~~ 222 (342)
.++.+|||+||+|.+|..+++.+...|++|++++++.++.+.+.+.+ +.. .+ .|..+. + .+.+... +
T Consensus 9 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~D~~d~-~---~~~~~~~-~ 83 (342)
T 1y1p_A 9 PEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQKRWDAKYPGRFETAVVEDMLKQ-G---AYDEVIK-G 83 (342)
T ss_dssp CTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHSTTTEEEEECSCTTST-T---TTTTTTT-T
T ss_pred CCCCEEEEECCccHHHHHHHHHHHHCCCEEEEEeCCcccHHHHHHHhhccCCCceEEEEecCCcCh-H---HHHHHHc-C
Confidence 45679999999999999999988888999999999887765544221 211 11 233332 1 2222222 5
Q ss_pred ccEEEeCCChh---------------hHHHHHHhhhh---CCEEEEEceec
Q 019332 223 IDIYFENVGGK---------------MLDAVLLNMKI---HGRIAVCGMIS 255 (342)
Q Consensus 223 ~d~vid~~g~~---------------~~~~~~~~l~~---~G~~v~~g~~~ 255 (342)
+|+||.+++.. ....+++.+.+ .+++|.+++..
T Consensus 84 ~d~vih~A~~~~~~~~~~~~~~~n~~g~~~ll~~~~~~~~~~~iv~~SS~~ 134 (342)
T 1y1p_A 84 AAGVAHIASVVSFSNKYDEVVTPAIGGTLNALRAAAATPSVKRFVLTSSTV 134 (342)
T ss_dssp CSEEEECCCCCSCCSCHHHHHHHHHHHHHHHHHHHHTCTTCCEEEEECCGG
T ss_pred CCEEEEeCCCCCCCCCHHHHHHHHHHHHHHHHHHHHhCCCCcEEEEeccHH
Confidence 99999998741 11233444432 37899888753
|
| >1sui_A Caffeoyl-COA O-methyltransferase; rossmann fold, protein-cofactor-substrate complex; HET: SAH FRE; 2.70A {Medicago sativa} SCOP: c.66.1.1 PDB: 1sus_A* | Back alignment and structure |
|---|
Probab=96.78 E-value=0.0078 Score=50.36 Aligned_cols=101 Identities=13% Similarity=0.095 Sum_probs=67.5
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC----
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF---- 219 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~---- 219 (342)
...++.+||-.| ++.|..++.+++.+ +.+|++++.+++..+.+++. .|....+..... +..+.+....
T Consensus 76 ~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~s~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~~ 152 (247)
T 1sui_A 76 KLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKDEK 152 (247)
T ss_dssp HHTTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHSGG
T ss_pred HhhCcCEEEEeC--CCcCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHHHHHHHHHhccC
Confidence 345678999998 57788899999886 67999999999877777632 354222222222 3333333331
Q ss_pred -CCCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 220 -PEGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 -~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
.+.||+||-.... ..+..+.+.|+++|.++.-.
T Consensus 153 ~~~~fD~V~~d~~~~~~~~~l~~~~~~LkpGG~lv~d~ 190 (247)
T 1sui_A 153 NHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 190 (247)
T ss_dssp GTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEEC
T ss_pred CCCCEEEEEEcCchHHHHHHHHHHHHhCCCCeEEEEec
Confidence 3469998743322 46778899999999988643
|
| >2yxe_A Protein-L-isoaspartate O-methyltransferase; rossman-type fold, alpha/beta/alpha sandwich structure, STRU genomics, NPPSFA; 2.00A {Methanocaldococcus jannaschii} | Back alignment and structure |
|---|
Probab=96.77 E-value=0.002 Score=52.60 Aligned_cols=100 Identities=18% Similarity=0.225 Sum_probs=68.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
....+.++++||..|+ | .|..+..+++..| .+|++++.+++..+.+++. .+... +..... +....+. ..
T Consensus 71 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~~~~--~~ 144 (215)
T 2yxe_A 71 ELLDLKPGMKVLEIGT-G-CGYHAAVTAEIVGEDGLVVSIERIPELAEKAERTLRKLGYDN-VIVIVG-DGTLGYE--PL 144 (215)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHTCTT-EEEEES-CGGGCCG--GG
T ss_pred HhhCCCCCCEEEEECC-C-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHcCCCC-eEEEEC-CcccCCC--CC
Confidence 4457889999999995 4 6899999999886 7999999999877777632 24322 111111 2111111 02
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.+|+|+.+..- .....+.++|+++|+++..
T Consensus 145 ~~fD~v~~~~~~~~~~~~~~~~L~pgG~lv~~ 176 (215)
T 2yxe_A 145 APYDRIYTTAAGPKIPEPLIRQLKDGGKLLMP 176 (215)
T ss_dssp CCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred CCeeEEEECCchHHHHHHHHHHcCCCcEEEEE
Confidence 369999987665 4446888999999998865
|
| >2egg_A AROE, shikimate 5-dehydrogenase; dimer, X-RAY diffraction, structural genomics, NPPSFA; 2.25A {Geobacillus kaustophilus} | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0073 Score=52.05 Aligned_cols=93 Identities=12% Similarity=0.026 Sum_probs=63.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+++|+|+ |++|.+++..+...|+ +|++..++.++.+.+.++++.. .+++ + +.+.+.. +++|+|++
T Consensus 140 ~~~~vlVlGa-Gg~g~aia~~L~~~G~~~V~v~nR~~~ka~~la~~~~~~~~~~~~------~-~~~~~~~-~~aDivIn 210 (297)
T 2egg_A 140 DGKRILVIGA-GGGARGIYFSLLSTAAERIDMANRTVEKAERLVREGDERRSAYFS------L-AEAETRL-AEYDIIIN 210 (297)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCSEEEEECSSHHHHHHHHHHSCSSSCCEEC------H-HHHHHTG-GGCSEEEE
T ss_pred CCCEEEEECc-HHHHHHHHHHHHHCCCCEEEEEeCCHHHHHHHHHHhhhccCceee------H-HHHHhhh-ccCCEEEE
Confidence 5789999997 9999999999999998 9999999988876665466652 2222 1 1232222 25899999
Q ss_pred CCChhhHH------HHHHhhhhCCEEEEEce
Q 019332 229 NVGGKMLD------AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 229 ~~g~~~~~------~~~~~l~~~G~~v~~g~ 253 (342)
|++..... ....+++++..++++..
T Consensus 211 ~t~~~~~~~~~~~~i~~~~l~~~~~v~D~~y 241 (297)
T 2egg_A 211 TTSVGMHPRVEVQPLSLERLRPGVIVSDIIY 241 (297)
T ss_dssp CSCTTCSSCCSCCSSCCTTCCTTCEEEECCC
T ss_pred CCCCCCCCCCCCCCCCHHHcCCCCEEEEcCC
Confidence 99863211 11235666666666654
|
| >1jg1_A PIMT;, protein-L-isoaspartate O-methyltransferase; rossmann methyltransferase, protein repair isomerization; HET: SAH; 1.20A {Pyrococcus furiosus} SCOP: c.66.1.7 PDB: 1jg2_A* 1jg3_A* 1jg4_A* | Back alignment and structure |
|---|
Probab=96.75 E-value=0.0014 Score=54.48 Aligned_cols=99 Identities=16% Similarity=0.280 Sum_probs=68.2
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCC-
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPE- 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~- 221 (342)
+...+.++++||-.|+ | .|..++.+++..+.+|++++.+++..+.+++. .|... +..... +... ....+
T Consensus 85 ~~l~~~~~~~vLdiG~-G-~G~~~~~la~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~-v~~~~~-d~~~---~~~~~~ 157 (235)
T 1jg1_A 85 EIANLKPGMNILEVGT-G-SGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKN-VHVILG-DGSK---GFPPKA 157 (235)
T ss_dssp HHHTCCTTCCEEEECC-T-TSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGG---CCGGGC
T ss_pred HhcCCCCCCEEEEEeC-C-cCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHHcCCCC-cEEEEC-Cccc---CCCCCC
Confidence 4457889999999995 4 78999999988778999999999877777632 34432 111111 2211 11112
Q ss_pred CccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 222 GIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 222 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
.+|+|+.+..- .....+.+.|+++|+++..
T Consensus 158 ~fD~Ii~~~~~~~~~~~~~~~L~pgG~lvi~ 188 (235)
T 1jg1_A 158 PYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP 188 (235)
T ss_dssp CEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred CccEEEECCcHHHHHHHHHHhcCCCcEEEEE
Confidence 49999977665 4556888999999998754
|
| >3c3y_A Pfomt, O-methyltransferase; plant secondary metabolism; HET: SAH; 1.37A {Mesembryanthemum crystallinum} | Back alignment and structure |
|---|
Probab=96.74 E-value=0.0053 Score=51.01 Aligned_cols=102 Identities=14% Similarity=0.079 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC---
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF--- 219 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~--- 219 (342)
....++.+||-.| ++.|..++.+++.+ +.+|+++..+++..+.+++. .|....+..... +..+.+....
T Consensus 66 ~~~~~~~~VLeiG--~G~G~~~~~la~~~~~~~~v~~iD~~~~~~~~a~~~~~~~g~~~~i~~~~g-da~~~l~~l~~~~ 142 (237)
T 3c3y_A 66 LKLVNAKKTIEVG--VFTGYSLLLTALSIPDDGKITAIDFDREAYEIGLPFIRKAGVEHKINFIES-DAMLALDNLLQGQ 142 (237)
T ss_dssp HHHTTCCEEEEEC--CTTSHHHHHHHHHSCTTCEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHST
T ss_pred HHhhCCCEEEEeC--CCCCHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcc
Confidence 3445678999998 56788888999886 57999999999887777632 355322222222 3333333331
Q ss_pred --CCCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 220 --PEGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 --~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
.+.+|+||-.... ..+..+.+.|+++|.++.-.
T Consensus 143 ~~~~~fD~I~~d~~~~~~~~~l~~~~~~L~pGG~lv~d~ 181 (237)
T 3c3y_A 143 ESEGSYDFGFVDADKPNYIKYHERLMKLVKVGGIVAYDN 181 (237)
T ss_dssp TCTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEEC
T ss_pred CCCCCcCEEEECCchHHHHHHHHHHHHhcCCCeEEEEec
Confidence 2469998754332 35778889999999987643
|
| >1xgk_A Nitrogen metabolite repression regulator NMRA; rossmann fold, transcriptional regulation, short chain dehyd reductase, NADP binding; 1.40A {Emericella nidulans} SCOP: c.2.1.2 PDB: 1k6x_A* 1k6j_A 1k6i_A* 1ti7_A* 2vus_A 2vut_A* 2vuu_A* | Back alignment and structure |
|---|
Probab=96.73 E-value=0.0094 Score=52.73 Aligned_cols=97 Identities=14% Similarity=0.130 Sum_probs=61.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH--HHHHHHc-CCCe-eEe-cCCchhHHHHHHHHCCCCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI--DLLKNKF-GFDE-AFN-YKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~--~~~~~~~-g~~~-v~~-~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
+.+|||+||+|.+|..+++.+...|.+|++++++.++. +.+. .. ++.. ..| ..+. +.+.+... ++|.||
T Consensus 5 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~l~-~~~~v~~v~~D~l~d~----~~l~~~~~-~~d~Vi 78 (352)
T 1xgk_A 5 KKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKGLIAEELQ-AIPNVTLFQGPLLNNV----PLMDTLFE-GAHLAF 78 (352)
T ss_dssp CCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCSHHHHHHH-TSTTEEEEESCCTTCH----HHHHHHHT-TCSEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCCChhhHHHHh-hcCCcEEEECCccCCH----HHHHHHHh-cCCEEE
Confidence 45799999999999999988888899999999887654 2333 22 2221 123 3333 23333332 489999
Q ss_pred eCCChh------hHHHHHHhhhh-C--CEEEEEceec
Q 019332 228 ENVGGK------MLDAVLLNMKI-H--GRIAVCGMIS 255 (342)
Q Consensus 228 d~~g~~------~~~~~~~~l~~-~--G~~v~~g~~~ 255 (342)
.+.+.. ....+++.++. + +++|.+++..
T Consensus 79 ~~a~~~~~~~~~~~~~l~~aa~~~g~v~~~V~~SS~~ 115 (352)
T 1xgk_A 79 INTTSQAGDEIAIGKDLADAAKRAGTIQHYIYSSMPD 115 (352)
T ss_dssp ECCCSTTSCHHHHHHHHHHHHHHHSCCSEEEEEECCC
T ss_pred EcCCCCCcHHHHHHHHHHHHHHHcCCccEEEEeCCcc
Confidence 776532 12334444443 3 5899887753
|
| >4id9_A Short-chain dehydrogenase/reductase; putative dehydrogenase, enzyme function initiative, EFI, STR genomics, oxidoreductase; HET: NAD; 1.60A {Agrobacterium fabrum} PDB: 4idg_A* | Back alignment and structure |
|---|
Probab=96.72 E-value=0.008 Score=52.83 Aligned_cols=91 Identities=15% Similarity=0.120 Sum_probs=58.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
..+.+|||+||+|.+|..+++.+...|++|+++++++.+ .+... ..|..+. + .+.+... ++|+||.+
T Consensus 17 ~~~~~vlVtGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-------~~~~~~~~Dl~d~-~---~~~~~~~-~~d~vih~ 84 (347)
T 4id9_A 17 RGSHMILVTGSAGRVGRAVVAALRTQGRTVRGFDLRPSG-------TGGEEVVGSLEDG-Q---ALSDAIM-GVSAVLHL 84 (347)
T ss_dssp ----CEEEETTTSHHHHHHHHHHHHTTCCEEEEESSCCS-------SCCSEEESCTTCH-H---HHHHHHT-TCSEEEEC
T ss_pred cCCCEEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCC-------CCccEEecCcCCH-H---HHHHHHh-CCCEEEEC
Confidence 455789999999999999999999999999999988654 12222 2344443 2 2222222 59999998
Q ss_pred CChh----------------hHHHHHHhhhhC--CEEEEEce
Q 019332 230 VGGK----------------MLDAVLLNMKIH--GRIAVCGM 253 (342)
Q Consensus 230 ~g~~----------------~~~~~~~~l~~~--G~~v~~g~ 253 (342)
++.. ....+++.++.. +++|.+++
T Consensus 85 A~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~V~~SS 126 (347)
T 4id9_A 85 GAFMSWAPADRDRMFAVNVEGTRRLLDAASAAGVRRFVFASS 126 (347)
T ss_dssp CCCCCSSGGGHHHHHHHHTHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred CcccCcchhhHHHHHHHHHHHHHHHHHHHHHcCCCeEEEECC
Confidence 8731 112344444443 48998887
|
| >1vl0_A DTDP-4-dehydrorhamnose reductase, RFBD ortholog; structural joint center for structural genomics, JCSG, protein structu initiative; HET: NAI UNL; 2.05A {Clostridium acetobutylicum} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.72 E-value=0.0077 Score=51.50 Aligned_cols=65 Identities=11% Similarity=0.133 Sum_probs=45.0
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-++..+|||+||+|.+|..+++.+...|++|++++++. .|..+...+.+.+++. ++|+||++
T Consensus 9 ~~~~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~Dl~d~~~~~~~~~~~---~~d~vih~ 70 (292)
T 1vl0_A 9 HHHHMKILITGANGQLGREIQKQLKGKNVEVIPTDVQD---------------LDITNVLAVNKFFNEK---KPNVVINC 70 (292)
T ss_dssp ---CEEEEEESTTSHHHHHHHHHHTTSSEEEEEECTTT---------------CCTTCHHHHHHHHHHH---CCSEEEEC
T ss_pred ccccceEEEECCCChHHHHHHHHHHhCCCeEEeccCcc---------------CCCCCHHHHHHHHHhc---CCCEEEEC
Confidence 35667999999999999999998888899999998751 2233321333333322 58999998
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
+|.
T Consensus 71 A~~ 73 (292)
T 1vl0_A 71 AAH 73 (292)
T ss_dssp CCC
T ss_pred Ccc
Confidence 874
|
| >2avd_A Catechol-O-methyltransferase; structural genomics, structural genomics consortium, SGC; HET: SAM; 1.70A {Homo sapiens} SCOP: c.66.1.1 | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0027 Score=52.34 Aligned_cols=103 Identities=14% Similarity=0.071 Sum_probs=68.6
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC--
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~-- 220 (342)
.+..++.+||-.|. |.|..++.+++.. +.+|++++.+++..+.+++. .|....+..... +..+.+.+...
T Consensus 65 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~g~~~~i~~~~~-d~~~~~~~~~~~~ 141 (229)
T 2avd_A 65 ARLIQAKKALDLGT--FTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLAAG 141 (229)
T ss_dssp HHHTTCCEEEEECC--TTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred HHhcCCCEEEEEcC--CccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHCCCCCeEEEEEc-CHHHHHHHHHhcC
Confidence 44567889999984 5889999999876 56999999999887777633 244211222222 33333333321
Q ss_pred --CCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 221 --EGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 --~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+.+|+|+-.... ..+..+.++|+++|.++....
T Consensus 142 ~~~~~D~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 180 (229)
T 2avd_A 142 EAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 180 (229)
T ss_dssp CTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHHcCCCeEEEEECC
Confidence 469997754332 367888899999999987543
|
| >2pk3_A GDP-6-deoxy-D-LYXO-4-hexulose reductase; SDR, short-chain dehydrogenase/reductase, rossmann fold, oxidoreductase; HET: A2R GDD; 1.82A {Aneurinibacillus thermoaerophilus} | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0076 Score=52.28 Aligned_cols=75 Identities=11% Similarity=0.177 Sum_probs=49.0
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
-++-.+|||+||+|.+|..+++.+...|++|++++++..+ + .++... ..|..+...+.+.++. +.+|+||.
T Consensus 9 ~~~~~~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~-~----~l~~~~~~~Dl~d~~~~~~~~~~---~~~d~vih 80 (321)
T 2pk3_A 9 HHGSMRALITGVAGFVGKYLANHLTEQNVEVFGTSRNNEA-K----LPNVEMISLDIMDSQRVKKVISD---IKPDYIFH 80 (321)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCTTC-C----CTTEEEEECCTTCHHHHHHHHHH---HCCSEEEE
T ss_pred ccCcceEEEECCCChHHHHHHHHHHHCCCEEEEEecCCcc-c----cceeeEEECCCCCHHHHHHHHHh---cCCCEEEE
Confidence 4566789999999999999999888889999999987654 2 122211 1244443123333332 25899999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 81 ~A~~ 84 (321)
T 2pk3_A 81 LAAK 84 (321)
T ss_dssp CCSC
T ss_pred cCcc
Confidence 9884
|
| >2nxc_A L11 mtase, ribosomal protein L11 methyltransferase; transferase S-adenosly-L-methionine dependent methyltransfer posttranslational modification; 1.59A {Thermus thermophilus} SCOP: c.66.1.39 PDB: 1ufk_A 2nxe_A* 2nxj_A 2nxn_A 2zbp_A* 2zbq_A* 2zbr_A* 3cjq_A* 3cjr_A* 3cju_A* 3egv_A* 3cjt_A* | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0063 Score=51.17 Aligned_cols=96 Identities=19% Similarity=0.179 Sum_probs=64.4
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCCccEE
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
+.++++||-.|. | .|..++.+++ .|++|++++.++...+.+++. .+.. +..... ++.+. ...+.+|+|
T Consensus 118 ~~~~~~VLDiGc-G-~G~l~~~la~-~g~~v~gvDi~~~~v~~a~~n~~~~~~~--v~~~~~-d~~~~---~~~~~fD~V 188 (254)
T 2nxc_A 118 LRPGDKVLDLGT-G-SGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVR--PRFLEG-SLEAA---LPFGPFDLL 188 (254)
T ss_dssp CCTTCEEEEETC-T-TSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCC--CEEEES-CHHHH---GGGCCEEEE
T ss_pred cCCCCEEEEecC-C-CcHHHHHHHH-hCCeEEEEECCHHHHHHHHHHHHHcCCc--EEEEEC-Chhhc---CcCCCCCEE
Confidence 678899999995 3 3777777776 477999999999877777632 2332 222222 33332 223469999
Q ss_pred EeCCCh----hhHHHHHHhhhhCCEEEEEcee
Q 019332 227 FENVGG----KMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 227 id~~g~----~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+...-. ..+..+.++|+++|+++..+..
T Consensus 189 v~n~~~~~~~~~l~~~~~~LkpgG~lils~~~ 220 (254)
T 2nxc_A 189 VANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EECCcHHHHHHHHHHHHHHcCCCCEEEEEeec
Confidence 865432 3567778899999999987653
|
| >2bll_A Protein YFBG; decarboxylase, short chain dehydrogenase, L-ARA4N biosynthes methyltransferase, transferase; 2.3A {Escherichia coli} SCOP: c.2.1.2 PDB: 1u9j_A 1z73_A 1z75_A 1z7b_A 1z74_A | Back alignment and structure |
|---|
Probab=96.71 E-value=0.0039 Score=54.69 Aligned_cols=73 Identities=18% Similarity=0.104 Sum_probs=47.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchh-HHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPD-LNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~-~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|.+|..+++.+... |++|++++++.++.+.+.+..+... ..|..+..+ +.+.++ ++|+||.++|
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~D~~~~~~~~~~~~~-----~~d~vih~A~ 76 (345)
T 2bll_A 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHFHFVEGDISIHSEWIEYHVK-----KCDVVLPLVA 76 (345)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTEEEEECCTTTCSHHHHHHHH-----HCSEEEECBC
T ss_pred eEEEECCCcHHHHHHHHHHHHhCCCEEEEEeCCcchHHHhhcCCCeEEEeccccCcHHHHHhhcc-----CCCEEEEccc
Confidence 6999999999999999888877 8999999998766433220112211 123333102 222332 4899999887
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 77 ~ 77 (345)
T 2bll_A 77 I 77 (345)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >3hm2_A Precorrin-6Y C5,15-methyltransferase; alpha-beta-sandwich, structural genomics, PSI-2, protein structure initiative; 2.21A {Corynebacterium diphtheriae} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.006 Score=47.85 Aligned_cols=102 Identities=16% Similarity=0.265 Sum_probs=69.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHH---cCCC-eeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNK---FGFD-EAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~i~~~~~ 220 (342)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++. .+.. .+ .... +..+.+.. ..
T Consensus 19 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~-~~~~--d~~~~~~~-~~ 92 (178)
T 3hm2_A 19 SALAPKPHETLWDIGG-G-SGSIAIEWLRSTPQTTAVCFEISEERRERILSNAINLGVSDRI-AVQQ--GAPRAFDD-VP 92 (178)
T ss_dssp HHHCCCTTEEEEEEST-T-TTHHHHHHHTTSSSEEEEEECSCHHHHHHHHHHHHTTTCTTSE-EEEC--CTTGGGGG-CC
T ss_pred HHhcccCCCeEEEeCC-C-CCHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHHHHHhCCCCCE-EEec--chHhhhhc-cC
Confidence 3456789999999995 4 589999999887 56999999999887777632 3443 33 2222 21112221 11
Q ss_pred CCccEEEeCCCh---hhHHHHHHhhhhCCEEEEEce
Q 019332 221 EGIDIYFENVGG---KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 ~~~d~vid~~g~---~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+.+|+|+..... ..+..+.+.|+++|+++....
T Consensus 93 ~~~D~i~~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 128 (178)
T 3hm2_A 93 DNPDVIFIGGGLTAPGVFAAAWKRLPVGGRLVANAV 128 (178)
T ss_dssp SCCSEEEECC-TTCTTHHHHHHHTCCTTCEEEEEEC
T ss_pred CCCCEEEECCcccHHHHHHHHHHhcCCCCEEEEEee
Confidence 469999865544 368899999999999986543
|
| >2yy7_A L-threonine dehydrogenase; thermolabIle, flavobacterium FRIG KUC-1, oxidoreductase; HET: PE8 NAD MES; 2.06A {Flavobacterium frigidimaris} | Back alignment and structure |
|---|
Probab=96.70 E-value=0.0045 Score=53.48 Aligned_cols=73 Identities=16% Similarity=0.078 Sum_probs=48.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.+|||+||+|.+|..+++.+... |.+|++++++..+.+... +... ..|..+...+.+.+++. ++|+||.++
T Consensus 3 ~~vlVtGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~---~~~~~~~D~~d~~~~~~~~~~~---~~d~vih~a 76 (312)
T 2yy7_A 3 PKILIIGACGQIGTELTQKLRKLYGTENVIASDIRKLNTDVVN---SGPFEVVNALDFNQIEHLVEVH---KITDIYLMA 76 (312)
T ss_dssp CCEEEETTTSHHHHHHHHHHHHHHCGGGEEEEESCCCSCHHHH---SSCEEECCTTCHHHHHHHHHHT---TCCEEEECC
T ss_pred ceEEEECCccHHHHHHHHHHHHhCCCCEEEEEcCCCccccccC---CCceEEecCCCHHHHHHHHhhc---CCCEEEECC
Confidence 46999999999999988877766 789999998766533222 2321 23444431233333321 599999998
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
+.
T Consensus 77 ~~ 78 (312)
T 2yy7_A 77 AL 78 (312)
T ss_dssp CC
T ss_pred cc
Confidence 84
|
| >3grz_A L11 mtase, ribosomal protein L11 methyltransferase; methylase, SAM-binding domain, PSI-2, nysgxrc; 2.00A {Lactobacillus delbrueckii subsp} | Back alignment and structure |
|---|
Probab=96.69 E-value=0.0016 Score=52.65 Aligned_cols=143 Identities=15% Similarity=0.213 Sum_probs=85.1
Q ss_pred CCCCCEEEeccccceeEe-ecCCcceeecCCCCCccchhhccCCchhhHHHhhhhh-cCCCCCCEEEEecCCcHHHHHHH
Q 019332 93 FKKGDLVWGMTGWEEYSL-VTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEV-CSPKQGECVFISAASGAVGQLVG 170 (342)
Q Consensus 93 ~~vGd~V~~~g~~~~~~~-v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai 170 (342)
+++|+.+.....|.+|.. .+....+.+ +.. +.+..+. ..+....+... ..+.++.+||-.|. | .|..+.
T Consensus 6 ~~~~~~~~~~p~w~~~~~~~~~~~~~~~-~~~--~~f~~~~----~~~~~~~~~~l~~~~~~~~~vLDiG~-G-~G~~~~ 76 (205)
T 3grz_A 6 INLSRHLAIVPEWEDYQPVFKDQEIIRL-DPG--LAFGTGN----HQTTQLAMLGIERAMVKPLTVADVGT-G-SGILAI 76 (205)
T ss_dssp EEEETTEEEEETTCCCCCSSTTCEEEEE-SCC-------CC----HHHHHHHHHHHHHHCSSCCEEEEETC-T-TSHHHH
T ss_pred EEECCcEEEeccccccccCCCCceeEEe-cCC--cccCCCC----CccHHHHHHHHHHhccCCCEEEEECC-C-CCHHHH
Confidence 456777777778888877 677777788 555 3331111 11111111111 12578899999985 3 377777
Q ss_pred HHHHHcCC-EEEEEeCChhhHHHHHHH---cCCC--eeEecCCchhHHHHHHHHCCCCccEEEeCCChhh----HHHHHH
Q 019332 171 QFAKLLGC-YVVGSAGSKDKIDLLKNK---FGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM----LDAVLL 240 (342)
Q Consensus 171 ~la~~~ga-~Vi~~~~s~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~----~~~~~~ 240 (342)
.+++. +. +|++++.+++..+.+++. .+.. .++.. ++.+ ...+.+|+|+-...... +..+.+
T Consensus 77 ~l~~~-~~~~v~~vD~s~~~~~~a~~~~~~~~~~~v~~~~~----d~~~----~~~~~fD~i~~~~~~~~~~~~l~~~~~ 147 (205)
T 3grz_A 77 AAHKL-GAKSVLATDISDESMTAAEENAALNGIYDIALQKT----SLLA----DVDGKFDLIVANILAEILLDLIPQLDS 147 (205)
T ss_dssp HHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCCCCEEEES----STTT----TCCSCEEEEEEESCHHHHHHHGGGSGG
T ss_pred HHHHC-CCCEEEEEECCHHHHHHHHHHHHHcCCCceEEEec----cccc----cCCCCceEEEECCcHHHHHHHHHHHHH
Confidence 77765 55 999999999877777632 2432 22222 2111 12247999987655433 345556
Q ss_pred hhhhCCEEEEEce
Q 019332 241 NMKIHGRIAVCGM 253 (342)
Q Consensus 241 ~l~~~G~~v~~g~ 253 (342)
.|+++|+++....
T Consensus 148 ~L~~gG~l~~~~~ 160 (205)
T 3grz_A 148 HLNEDGQVIFSGI 160 (205)
T ss_dssp GEEEEEEEEEEEE
T ss_pred hcCCCCEEEEEec
Confidence 7899999887544
|
| >3duw_A OMT, O-methyltransferase, putative; alternating of alpha and beta with complex SAH; HET: SAH; 1.20A {Bacillus cereus} PDB: 3dul_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.004 Score=51.06 Aligned_cols=103 Identities=14% Similarity=0.078 Sum_probs=67.8
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC---
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF--- 219 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~--- 219 (342)
....++.+||-.| .|.|..++.+++.. +.+|++++.+++..+.+++. .|....+..... +..+.+....
T Consensus 54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~ 130 (223)
T 3duw_A 54 VQIQGARNILEIG--TLGGYSTIWLARGLSSGGRVVTLEASEKHADIARSNIERANLNDRVEVRTG-LALDSLQQIENEK 130 (223)
T ss_dssp HHHHTCSEEEEEC--CTTSHHHHHHHTTCCSSCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHHTT
T ss_pred HHhhCCCEEEEec--CCccHHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHHHHcCCCCcEEEEEc-CHHHHHHHHHhcC
Confidence 4456788999998 46788899999887 57999999999877776632 354321222222 3333333321
Q ss_pred CCCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PEGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+|+|+-.... ..+..+.+.|+++|.++.-..
T Consensus 131 ~~~fD~v~~d~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 168 (223)
T 3duw_A 131 YEPFDFIFIDADKQNNPAYFEWALKLSRPGTVIIGDNV 168 (223)
T ss_dssp CCCCSEEEECSCGGGHHHHHHHHHHTCCTTCEEEEESC
T ss_pred CCCcCEEEEcCCcHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 1359998743322 357788899999998876543
|
| >1uay_A Type II 3-hydroxyacyl-COA dehydrogenase; beta oxidation, fatty acid, structural genomi structural genomics/proteomics initiative, RSGI; HET: ADN; 1.40A {Thermus thermophilus} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.68 E-value=0.0019 Score=53.63 Aligned_cols=73 Identities=14% Similarity=0.099 Sum_probs=48.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC-CCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF-PEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~-~~~~d~vid~~g 231 (342)
+.++||+||+|++|.+.++.+...|++|++++++++ .. ++- ....|..+...+.+.+.+.. .+++|++++++|
T Consensus 2 ~k~vlVtGasggiG~~la~~l~~~G~~V~~~~r~~~----~~-~~~-~~~~D~~~~~~~~~~~~~~~~~~~~d~li~~ag 75 (242)
T 1uay_A 2 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRRE----GE-DLI-YVEGDVTREEDVRRAVARAQEEAPLFAVVSAAG 75 (242)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCC----SS-SSE-EEECCTTCHHHHHHHHHHHHHHSCEEEEEECCC
T ss_pred CCEEEEeCCCChHHHHHHHHHHHCCCEEEEEccCcc----cc-ceE-EEeCCCCCHHHHHHHHHHHHhhCCceEEEEccc
Confidence 468999999999999998888888999999998765 11 110 01234444323333333330 126999999887
|
| >3mje_A AMPHB; rossmann fold, oxidoreductase; HET: NDP; 1.36A {Streptomyces nodosus} PDB: 3mjc_A* 3mjs_A* 3mjv_A* 3mjt_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.01 Score=54.87 Aligned_cols=82 Identities=16% Similarity=0.226 Sum_probs=54.0
Q ss_pred CCCC--CEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChh---hH----HHHHHHcCCCe---eEecCCchhHHHHHH
Q 019332 150 PKQG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD---KI----DLLKNKFGFDE---AFNYKEEPDLNEALK 216 (342)
Q Consensus 150 ~~~~--~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~---~~----~~~~~~~g~~~---v~~~~~~~~~~~~i~ 216 (342)
++++ .++||+|++|++|.+.++.+...|+ +|+.+.++.. +. +.++ +.|..- ..|-.+...+.+.+.
T Consensus 234 ~~~~~~~~vLITGgsgGIG~alA~~La~~Ga~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~ 312 (496)
T 3mje_A 234 KRPPVHGSVLVTGGTGGIGGRVARRLAEQGAAHLVLTSRRGADAPGAAELRAELE-QLGVRVTIAACDAADREALAALLA 312 (496)
T ss_dssp CCCCCCSEEEEETCSSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHH
T ss_pred CCCCCCCEEEEECCCCchHHHHHHHHHHCCCcEEEEEeCCCCChHHHHHHHHHHH-hcCCeEEEEEccCCCHHHHHHHHH
Confidence 3455 8999999999999998888888899 8888888632 12 2233 456532 134444423444444
Q ss_pred HHCCC-CccEEEeCCCh
Q 019332 217 RYFPE-GIDIYFENVGG 232 (342)
Q Consensus 217 ~~~~~-~~d~vid~~g~ 232 (342)
+.... .+|.+|+++|.
T Consensus 313 ~i~~~g~ld~vVh~AGv 329 (496)
T 3mje_A 313 ELPEDAPLTAVFHSAGV 329 (496)
T ss_dssp TCCTTSCEEEEEECCCC
T ss_pred HHHHhCCCeEEEECCcc
Confidence 43332 79999999884
|
| >3t4e_A Quinate/shikimate dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid; HET: NAD; 1.95A {Salmonella enterica subsp} PDB: 1npd_A* 1o9b_A* 1vi2_A* | Back alignment and structure |
|---|
Probab=96.68 E-value=0.014 Score=50.42 Aligned_cols=75 Identities=16% Similarity=0.189 Sum_probs=51.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC---hhhHHHHHHHcC----CC-eeEecCCchhHHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS---KDKIDLLKNKFG----FD-EAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s---~~~~~~~~~~~g----~~-~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
.+.++||+|+ |++|.+++..+...|+ +|+++.|+ .+|.+.+.++++ .. .+++..+...+.+.+.+
T Consensus 147 ~gk~~lVlGA-GGaaraia~~L~~~G~~~v~v~nRt~~~~~~a~~la~~~~~~~~~~v~~~~~~~l~~~~~~l~~----- 220 (312)
T 3t4e_A 147 RGKTMVLLGA-GGAATAIGAQAAIEGIKEIKLFNRKDDFFEKAVAFAKRVNENTDCVVTVTDLADQHAFTEALAS----- 220 (312)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTHHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHHH-----
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHcCCCEEEEEECCCchHHHHHHHHHHhhhccCcceEEechHhhhhhHhhccC-----
Confidence 5789999997 9999999999989999 89999999 666655443333 21 23344331011233332
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|+||+|.+.
T Consensus 221 ~DiIINaTp~ 230 (312)
T 3t4e_A 221 ADILTNGTKV 230 (312)
T ss_dssp CSEEEECSST
T ss_pred ceEEEECCcC
Confidence 8999998874
|
| >3ius_A Uncharacterized conserved protein; APC63810, silicibacter pomeroyi DSS, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.66A {Ruegeria pomeroyi dss-3} | Back alignment and structure |
|---|
Probab=96.67 E-value=0.014 Score=49.67 Aligned_cols=89 Identities=10% Similarity=0.188 Sum_probs=63.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
.+|||+|+ |.+|..+++.+...|.+|+++++++.+.+.+. ..+...+ .|..+. + ..++|+||.+++.
T Consensus 6 ~~ilVtGa-G~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~D~~d~-~---------~~~~d~vi~~a~~ 73 (286)
T 3ius_A 6 GTLLSFGH-GYTARVLSRALAPQGWRIIGTSRNPDQMEAIR-ASGAEPLLWPGEEP-S---------LDGVTHLLISTAP 73 (286)
T ss_dssp CEEEEETC-CHHHHHHHHHHGGGTCEEEEEESCGGGHHHHH-HTTEEEEESSSSCC-C---------CTTCCEEEECCCC
T ss_pred CcEEEECC-cHHHHHHHHHHHHCCCEEEEEEcChhhhhhHh-hCCCeEEEeccccc-c---------cCCCCEEEECCCc
Confidence 47999998 99999999999888999999999998877776 5554322 222221 1 2369999999974
Q ss_pred h-----hHHHHHHhhhh----CCEEEEEcee
Q 019332 233 K-----MLDAVLLNMKI----HGRIAVCGMI 254 (342)
Q Consensus 233 ~-----~~~~~~~~l~~----~G~~v~~g~~ 254 (342)
. ....+++.++. -.++|.+++.
T Consensus 74 ~~~~~~~~~~l~~a~~~~~~~~~~~v~~Ss~ 104 (286)
T 3ius_A 74 DSGGDPVLAALGDQIAARAAQFRWVGYLSTT 104 (286)
T ss_dssp BTTBCHHHHHHHHHHHHTGGGCSEEEEEEEG
T ss_pred cccccHHHHHHHHHHHhhcCCceEEEEeecc
Confidence 1 23445555544 2688887764
|
| >2ekl_A D-3-phosphoglycerate dehydrogenase; structural genomics, NPPSFA, national project on protein structural and functional analyses; HET: NAD; 1.77A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.01 Score=51.57 Aligned_cols=88 Identities=23% Similarity=0.172 Sum_probs=65.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|+|. |.+|...++.++..|++|++..++.++. .+. ++|+... ++.+.+++ .|+|+.+.
T Consensus 140 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~-~~g~~~~-------~l~ell~~-----aDvVvl~~ 204 (313)
T 2ekl_A 140 LAGKTIGIVGF-GRIGTKVGIIANAMGMKVLAYDILDIRE-KAE-KINAKAV-------SLEELLKN-----SDVISLHV 204 (313)
T ss_dssp CTTCEEEEESC-SHHHHHHHHHHHHTTCEEEEECSSCCHH-HHH-HTTCEEC-------CHHHHHHH-----CSEEEECC
T ss_pred CCCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCcchh-HHH-hcCceec-------CHHHHHhh-----CCEEEEec
Confidence 46789999996 9999999999999999999999887764 455 6776421 33333433 79999888
Q ss_pred Ch-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 231 GG-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
.. + .+ ...+..+++++.++.++.
T Consensus 205 P~~~~t~~li~~~~l~~mk~ga~lIn~ar 233 (313)
T 2ekl_A 205 TVSKDAKPIIDYPQFELMKDNVIIVNTSR 233 (313)
T ss_dssp CCCTTSCCSBCHHHHHHSCTTEEEEESSC
T ss_pred cCChHHHHhhCHHHHhcCCCCCEEEECCC
Confidence 74 2 12 466788899988888776
|
| >2pwy_A TRNA (adenine-N(1)-)-methyltransferase; mtase, adoMet, TRMI, tRNA-M1A58; HET: SAH; 1.70A {Thermus thermophilus} | Back alignment and structure |
|---|
Probab=96.66 E-value=0.0037 Score=52.46 Aligned_cols=102 Identities=15% Similarity=0.119 Sum_probs=70.3
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHc----CCCeeEecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKF----GFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++.+ |.+.+ ..... ++.+. ...
T Consensus 90 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~~D~~~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~~--~~~ 163 (258)
T 2pwy_A 90 TLLDLAPGMRVLEAGT-G-SGGLTLFLARAVGEKGLVESYEARPHHLAQAERNVRAFWQVENV-RFHLG-KLEEA--ELE 163 (258)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHHHHCCCCCE-EEEES-CGGGC--CCC
T ss_pred HHcCCCCCCEEEEECC-C-cCHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCE-EEEEC-chhhc--CCC
Confidence 4467899999999995 4 588899999885 569999999998888777432 53221 11111 21111 011
Q ss_pred CCCccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PEGIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+|+|+..... ..+..+.++|+++|+++.+..
T Consensus 164 ~~~~D~v~~~~~~~~~~l~~~~~~L~~gG~l~~~~~ 199 (258)
T 2pwy_A 164 EAAYDGVALDLMEPWKVLEKAALALKPDRFLVAYLP 199 (258)
T ss_dssp TTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCcCEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 2369998865554 578899999999999987643
|
| >2z5l_A Tylkr1, tylactone synthase starter module and modules 1 & 2; short-chain dehydrogenase/reductase, rossman fold; 1.95A {Streptomyces fradiae} | Back alignment and structure |
|---|
Probab=96.65 E-value=0.012 Score=54.78 Aligned_cols=79 Identities=16% Similarity=0.185 Sum_probs=53.7
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhh---HH----HHHHHcCCC-ee--EecCCchhHHHHHHHH
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK---ID----LLKNKFGFD-EA--FNYKEEPDLNEALKRY 218 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~---~~----~~~~~~g~~-~v--~~~~~~~~~~~~i~~~ 218 (342)
++++.++||+|++|++|...++.+...|+ +|+.+.++..+ .+ .++ +.|.. .+ .|..+...+.+.+.+
T Consensus 256 ~~~~~~vLITGgtGgIG~~lA~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dvtd~~~v~~~~~~- 333 (511)
T 2z5l_A 256 WQPSGTVLITGGMGAIGRRLARRLAAEGAERLVLTSRRGPEAPGAAELAEELR-GHGCEVVHAACDVAERDALAALVTA- 333 (511)
T ss_dssp CCCCSEEEEETTTSHHHHHHHHHHHHTTCSEEEEEESSGGGSTTHHHHHHHHH-TTTCEEEEEECCSSCHHHHHHHHHH-
T ss_pred cCCCCEEEEECCCCHHHHHHHHHHHhCCCcEEEEEecCCcccHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHhc-
Confidence 56789999999999999998888888899 79999887632 22 222 34542 11 344444233333333
Q ss_pred CCCCccEEEeCCCh
Q 019332 219 FPEGIDIYFENVGG 232 (342)
Q Consensus 219 ~~~~~d~vid~~g~ 232 (342)
+.+|.||++.|.
T Consensus 334 --~~ld~VVh~AGv 345 (511)
T 2z5l_A 334 --YPPNAVFHTAGI 345 (511)
T ss_dssp --SCCSEEEECCCC
T ss_pred --CCCcEEEECCcc
Confidence 469999999983
|
| >3d64_A Adenosylhomocysteinase; structural genomics, ssgcid, S-adenosyl-L-homocysteine hydro NAD, one-carbon metabolism; HET: NAD; 2.30A {Burkholderia pseudomallei} PDB: 3glq_A* | Back alignment and structure |
|---|
Probab=96.64 E-value=0.0053 Score=56.42 Aligned_cols=91 Identities=16% Similarity=0.172 Sum_probs=67.9
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
--.|.+|.|.|. |.+|..+++.++.+|++|++..++..+..... ..|.. +. ++.+.++ ..|+|+.+
T Consensus 274 ~L~GktVgIIG~-G~IG~~vA~~l~~~G~~V~v~d~~~~~~~~a~-~~G~~-~~------~l~ell~-----~aDiVi~~ 339 (494)
T 3d64_A 274 MIAGKIAVVAGY-GDVGKGCAQSLRGLGATVWVTEIDPICALQAA-MEGYR-VV------TMEYAAD-----KADIFVTA 339 (494)
T ss_dssp CCTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred ccCCCEEEEEcc-CHHHHHHHHHHHHCCCEEEEEeCChHhHHHHH-HcCCE-eC------CHHHHHh-----cCCEEEEC
Confidence 357889999996 99999999999999999999999887643333 45552 11 3333322 38999999
Q ss_pred CCh-hhH-HHHHHhhhhCCEEEEEcee
Q 019332 230 VGG-KML-DAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 230 ~g~-~~~-~~~~~~l~~~G~~v~~g~~ 254 (342)
.+. ..+ ...++.++++..+++++..
T Consensus 340 ~~t~~lI~~~~l~~MK~gAilINvgrg 366 (494)
T 3d64_A 340 TGNYHVINHDHMKAMRHNAIVCNIGHF 366 (494)
T ss_dssp SSSSCSBCHHHHHHCCTTEEEEECSSS
T ss_pred CCcccccCHHHHhhCCCCcEEEEcCCC
Confidence 865 333 4678899999999988863
|
| >3c1o_A Eugenol synthase; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, oxidoreductase; HET: NAP; 1.80A {Clarkia breweri} | Back alignment and structure |
|---|
Probab=96.63 E-value=0.0078 Score=52.28 Aligned_cols=91 Identities=14% Similarity=0.147 Sum_probs=59.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh------hhHHHHHH--HcCCCe-eEecCCchhHHHHHHHHCCCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK------DKIDLLKN--KFGFDE-AFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
.+|||+||+|.+|..+++.+...|.+|++++++. ++.+.+.. ..++.. ..|..+. +.+.+... ++|
T Consensus 5 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~~~R~~~~~~~~~~~~~l~~~~~~~v~~v~~D~~d~----~~l~~a~~-~~d 79 (321)
T 3c1o_A 5 EKIIIYGGTGYIGKFMVRASLSFSHPTFIYARPLTPDSTPSSVQLREEFRSMGVTIIEGEMEEH----EKMVSVLK-QVD 79 (321)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECCCCTTCCHHHHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-TCS
T ss_pred cEEEEEcCCchhHHHHHHHHHhCCCcEEEEECCcccccChHHHHHHHHhhcCCcEEEEecCCCH----HHHHHHHc-CCC
Confidence 4699999999999999998888899999999875 33333320 234432 2344443 23443333 499
Q ss_pred EEEeCCChh---hHHHHHHhhhhC---CEEE
Q 019332 225 IYFENVGGK---MLDAVLLNMKIH---GRIA 249 (342)
Q Consensus 225 ~vid~~g~~---~~~~~~~~l~~~---G~~v 249 (342)
+||.+++.. ....+++.++.. +++|
T Consensus 80 ~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (321)
T 3c1o_A 80 IVISALPFPMISSQIHIINAIKAAGNIKRFL 110 (321)
T ss_dssp EEEECCCGGGSGGGHHHHHHHHHHCCCCEEE
T ss_pred EEEECCCccchhhHHHHHHHHHHhCCccEEe
Confidence 999999852 334455555443 4776
|
| >1jay_A Coenzyme F420H2:NADP+ oxidoreductase (FNO); rossman fold, structural genomics; HET: NAP F42; 1.65A {Archaeoglobus fulgidus} SCOP: c.2.1.6 PDB: 1jax_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.029 Score=45.47 Aligned_cols=89 Identities=12% Similarity=0.064 Sum_probs=59.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC-----CCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG-----FDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g-----~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+|+|+|++|.+|...+..+...|.+|++..+++++.+.+.+.++ .+ +.. . ++.+.+++ +|+|+.|
T Consensus 2 ~i~iiGa~G~~G~~ia~~l~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~--~~~--~-~~~~~~~~-----~D~Vi~~ 71 (212)
T 1jay_A 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEYRRIAGDAS--ITG--M-KNEDAAEA-----CDIAVLT 71 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHHHHHHSSCC--EEE--E-EHHHHHHH-----CSEEEEC
T ss_pred eEEEEcCCCHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHhccccccCC--CCh--h-hHHHHHhc-----CCEEEEe
Confidence 68999977999999888888889999999999887776653344 11 111 1 44444432 8999999
Q ss_pred CChhhHHHHHHhhh---hCCEEEEEce
Q 019332 230 VGGKMLDAVLLNMK---IHGRIAVCGM 253 (342)
Q Consensus 230 ~g~~~~~~~~~~l~---~~G~~v~~g~ 253 (342)
+........+..+. ++..++.+..
T Consensus 72 ~~~~~~~~~~~~l~~~~~~~~vi~~~~ 98 (212)
T 1jay_A 72 IPWEHAIDTARDLKNILREKIVVSPLV 98 (212)
T ss_dssp SCHHHHHHHHHHTHHHHTTSEEEECCC
T ss_pred CChhhHHHHHHHHHHHcCCCEEEEcCC
Confidence 99755554443332 3445555443
|
| >3orh_A Guanidinoacetate N-methyltransferase; structura genomics, structural genomics consortium, SGC; HET: SAH; 1.86A {Homo sapiens} PDB: 1xcj_A* 1xcl_A* 1p1c_A* 1p1b_A* 1khh_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0015 Score=54.33 Aligned_cols=96 Identities=7% Similarity=-0.019 Sum_probs=65.7
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----C-eeEecCCchhHHHHHHHHCCCCcc
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----D-EAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~-~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
..+|.+||-+| .|.|..+..+++..+.+|+++..+++-.+.++ +... . .++. . +..+.+.....+.||
T Consensus 58 ~~~G~rVLdiG--~G~G~~~~~~~~~~~~~v~~id~~~~~~~~a~-~~~~~~~~~~~~~~---~-~a~~~~~~~~~~~FD 130 (236)
T 3orh_A 58 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLR-DWAPRQTHKVIPLK---G-LWEDVAPTLPDGHFD 130 (236)
T ss_dssp TTTCEEEEEEC--CTTSHHHHHHTTSCEEEEEEEECCHHHHHHHH-HHGGGCSSEEEEEE---S-CHHHHGGGSCTTCEE
T ss_pred ccCCCeEEEEC--CCccHHHHHHHHhCCcEEEEEeCCHHHHHHHH-HHHhhCCCceEEEe---e-hHHhhcccccccCCc
Confidence 46889999999 45788888888877789999999998888887 4322 1 1222 1 333333333334788
Q ss_pred EE-EeCCCh-----------hhHHHHHHhhhhCCEEEEEc
Q 019332 225 IY-FENVGG-----------KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 225 ~v-id~~g~-----------~~~~~~~~~l~~~G~~v~~g 252 (342)
.| +|+... ..+..+.++|+|||+++.+.
T Consensus 131 ~i~~D~~~~~~~~~~~~~~~~~~~e~~rvLkPGG~l~f~~ 170 (236)
T 3orh_A 131 GILYDTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 170 (236)
T ss_dssp EEEECCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred eEEEeeeecccchhhhcchhhhhhhhhheeCCCCEEEEEe
Confidence 77 565432 24567889999999998764
|
| >3ujc_A Phosphoethanolamine N-methyltransferase; parasite; HET: PC; 1.19A {Plasmodium falciparum} PDB: 3uj9_A* 3uj6_A* 3uj7_A* 3uj8_A* 3uja_A 3ujb_A* 4fgz_A* 3ujd_A* | Back alignment and structure |
|---|
Probab=96.60 E-value=0.0034 Score=52.89 Aligned_cols=99 Identities=8% Similarity=0.018 Sum_probs=69.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC----eeEecCCchhHHHHHHHHCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD----EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~----~v~~~~~~~~~~~~i~~~~~~ 221 (342)
....+.++.+||-.|. |.|..+..+++..+++|++++.+++..+.++ +.... .++..+-. ++ ....+
T Consensus 49 ~~~~~~~~~~vLdiG~--G~G~~~~~l~~~~~~~v~~vD~s~~~~~~a~-~~~~~~~~~~~~~~d~~-~~-----~~~~~ 119 (266)
T 3ujc_A 49 SDIELNENSKVLDIGS--GLGGGCMYINEKYGAHTHGIDICSNIVNMAN-ERVSGNNKIIFEANDIL-TK-----EFPEN 119 (266)
T ss_dssp TTCCCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHH-HTCCSCTTEEEEECCTT-TC-----CCCTT
T ss_pred HhcCCCCCCEEEEECC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHH-HHhhcCCCeEEEECccc-cC-----CCCCC
Confidence 4456789999999994 5788899999877999999999999888888 43321 12221111 11 11123
Q ss_pred CccEEEeCCCh---------hhHHHHHHhhhhCCEEEEEce
Q 019332 222 GIDIYFENVGG---------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 ~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+|+|+....- ..+..+.++|+|+|+++....
T Consensus 120 ~fD~v~~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 160 (266)
T 3ujc_A 120 NFDLIYSRDAILALSLENKNKLFQKCYKWLKPTGTLLITDY 160 (266)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cEEEEeHHHHHHhcChHHHHHHHHHHHHHcCCCCEEEEEEe
Confidence 79999875332 246788899999999987754
|
| >1qyc_A Phenylcoumaran benzylic ether reductase PT1; NADPH-dependent aromatic alcohol reductases, pcber, PLR, IFR, lignans, isoflavonoids, plant protein; 2.20A {Pinus taeda} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.59 E-value=0.011 Score=50.92 Aligned_cols=92 Identities=21% Similarity=0.246 Sum_probs=58.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh------hhHHHHHH--HcCCCe-eEecCCchhHHHHHHHHCCCCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK------DKIDLLKN--KFGFDE-AFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~------~~~~~~~~--~~g~~~-v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
..+|||+||+|.+|...++.+...|.+|++++++. ++.+.++. ..|+.. ..|..+...+.+.++ ++
T Consensus 4 ~~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~~~~~~l~~~~v~~v~~D~~d~~~l~~~~~-----~~ 78 (308)
T 1qyc_A 4 RSRILLIGATGYIGRHVAKASLDLGHPTFLLVRESTASSNSEKAQLLESFKASGANIVHGSIDDHASLVEAVK-----NV 78 (308)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCCTTTTHHHHHHHHHHHTTTCEEECCCTTCHHHHHHHHH-----TC
T ss_pred CCEEEEEcCCcHHHHHHHHHHHhCCCCEEEEECCcccccCHHHHHHHHHHHhCCCEEEEeccCCHHHHHHHHc-----CC
Confidence 35799999999999999998888899999999873 33333330 234422 234444312333332 49
Q ss_pred cEEEeCCChh---hHHHHHHhhhhC---CEEE
Q 019332 224 DIYFENVGGK---MLDAVLLNMKIH---GRIA 249 (342)
Q Consensus 224 d~vid~~g~~---~~~~~~~~l~~~---G~~v 249 (342)
|+||.+++.. ....+++.++.. ++++
T Consensus 79 d~vi~~a~~~~~~~~~~l~~aa~~~g~v~~~v 110 (308)
T 1qyc_A 79 DVVISTVGSLQIESQVNIIKAIKEVGTVKRFF 110 (308)
T ss_dssp SEEEECCCGGGSGGGHHHHHHHHHHCCCSEEE
T ss_pred CEEEECCcchhhhhHHHHHHHHHhcCCCceEe
Confidence 9999999852 233444544443 4676
|
| >1rkx_A CDP-glucose-4,6-dehydratase; SDR, lyase; HET: NAD; 1.80A {Yersinia pseudotuberculosis} SCOP: c.2.1.2 PDB: 1wvg_A* | Back alignment and structure |
|---|
Probab=96.58 E-value=0.0026 Score=56.24 Aligned_cols=76 Identities=18% Similarity=0.351 Sum_probs=50.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc----CCCe-eEecCCchhHHHHHHHHCCCCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF----GFDE-AFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~----g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
+.+|||+||+|.+|..+++.+...|++|++++++..+.+.+.+.+ +... ..|..+...+.+.++.. ++|+||
T Consensus 9 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi 85 (357)
T 1rkx_A 9 GKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQNKLLESIREF---QPEIVF 85 (357)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred CCEEEEECCCchHHHHHHHHHHhCCCeEEEEeCCCcccchhhHhhccCCceEEEEccccCHHHHHHHHHhc---CCCEEE
Confidence 468999999999999999988888999999998775443332122 1211 13444431233333322 589999
Q ss_pred eCCC
Q 019332 228 ENVG 231 (342)
Q Consensus 228 d~~g 231 (342)
.++|
T Consensus 86 h~A~ 89 (357)
T 1rkx_A 86 HMAA 89 (357)
T ss_dssp ECCS
T ss_pred ECCC
Confidence 9998
|
| >3tr6_A O-methyltransferase; cellular processes; HET: SAH; 2.70A {Coxiella burnetii} SCOP: c.66.1.0 | Back alignment and structure |
|---|
Probab=96.57 E-value=0.0046 Score=50.74 Aligned_cols=103 Identities=14% Similarity=0.110 Sum_probs=68.0
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC--
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~-- 220 (342)
....++.+||-.|. |.|..++.+++.+ +.+|++++.+++..+.+++. .|....+..... +..+.+.....
T Consensus 60 ~~~~~~~~vLdiG~--G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~~~~~~~~~ 136 (225)
T 3tr6_A 60 VKLMQAKKVIDIGT--FTGYSAIAMGLALPKDGTLITCDVDEKSTALAKEYWEKAGLSDKIGLRLS-PAKDTLAELIHAG 136 (225)
T ss_dssp HHHHTCSEEEEECC--TTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHTTT
T ss_pred HHhhCCCEEEEeCC--cchHHHHHHHHhCCCCCEEEEEeCCHHHHHHHHHHHHHCCCCCceEEEeC-CHHHHHHHhhhcc
Confidence 34457789999984 5688899999876 56999999999877777633 254321222222 33344433321
Q ss_pred --CCccEEEeCCCh----hhHHHHHHhhhhCCEEEEEce
Q 019332 221 --EGIDIYFENVGG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 --~~~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+.+|+|+-.... ..+..+.+.|+++|.++.-..
T Consensus 137 ~~~~fD~v~~~~~~~~~~~~l~~~~~~L~pgG~lv~~~~ 175 (225)
T 3tr6_A 137 QAWQYDLIYIDADKANTDLYYEESLKLLREGGLIAVDNV 175 (225)
T ss_dssp CTTCEEEEEECSCGGGHHHHHHHHHHHEEEEEEEEEECS
T ss_pred CCCCccEEEECCCHHHHHHHHHHHHHhcCCCcEEEEeCC
Confidence 469998844332 357788899999999986543
|
| >3rft_A Uronate dehydrogenase; apoenzyme, rossmann fold, NAD binding, oxidoreductase; 1.90A {Agrobacterium tumefaciens} PDB: 3rfv_A* 3rfx_A* | Back alignment and structure |
|---|
Probab=96.54 E-value=0.0026 Score=53.86 Aligned_cols=95 Identities=12% Similarity=0.075 Sum_probs=60.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+.+|||+||+|++|.++++.+...|++|+++++++.+.. ..+.. ...|..+. +.+.+... ++|++++++|
T Consensus 3 ~k~vlVTGasg~IG~~la~~L~~~G~~V~~~~r~~~~~~----~~~~~~~~~Dl~d~----~~~~~~~~-~~D~vi~~Ag 73 (267)
T 3rft_A 3 MKRLLVTGAAGQLGRVMRERLAPMAEILRLADLSPLDPA----GPNEECVQCDLADA----NAVNAMVA-GCDGIVHLGG 73 (267)
T ss_dssp EEEEEEESTTSHHHHHHHHHTGGGEEEEEEEESSCCCCC----CTTEEEEECCTTCH----HHHHHHHT-TCSEEEECCS
T ss_pred CCEEEEECCCCHHHHHHHHHHHhcCCEEEEEecCCcccc----CCCCEEEEcCCCCH----HHHHHHHc-CCCEEEECCC
Confidence 468999999999999999888888999999998876532 11111 12344443 23333332 5999999987
Q ss_pred h---hhHH-----------HHHHhhhh--CCEEEEEceecc
Q 019332 232 G---KMLD-----------AVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 232 ~---~~~~-----------~~~~~l~~--~G~~v~~g~~~~ 256 (342)
. ..+. .+++.+++ .+++|.+++...
T Consensus 74 ~~~~~~~~~~~~~N~~g~~~l~~a~~~~~~~~iv~~SS~~~ 114 (267)
T 3rft_A 74 ISVEKPFEQILQGNIIGLYNLYEAARAHGQPRIVFASSNHT 114 (267)
T ss_dssp CCSCCCHHHHHHHHTHHHHHHHHHHHHTTCCEEEEEEEGGG
T ss_pred CcCcCCHHHHHHHHHHHHHHHHHHHHHcCCCEEEEEcchHH
Confidence 4 1111 23333333 368998887543
|
| >2pzm_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NAD complex, protein-nucleotide comple binding protein; HET: NAD UDP; 2.00A {Bordetella bronchiseptica} PDB: 2pzl_A* 2pzk_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.0033 Score=55.01 Aligned_cols=77 Identities=9% Similarity=0.018 Sum_probs=50.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHH-HHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID-LLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~-~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+|||+||+|.+|..+++.+...|++|++++++..+.. .+. .+.--. ..|..+...+.+.+.+. ++|+||+
T Consensus 19 ~~~~vlVTGasG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~-~l~~v~~~~~Dl~d~~~~~~~~~~~---~~D~vih 94 (330)
T 2pzm_A 19 SHMRILITGGAGCLGSNLIEHWLPQGHEILVIDNFATGKREVLP-PVAGLSVIEGSVTDAGLLERAFDSF---KPTHVVH 94 (330)
T ss_dssp TCCEEEEETTTSHHHHHHHHHHGGGTCEEEEEECCSSSCGGGSC-SCTTEEEEECCTTCHHHHHHHHHHH---CCSEEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCccchhhhh-ccCCceEEEeeCCCHHHHHHHHhhc---CCCEEEE
Confidence 4568999999999999999988888999999998654321 111 221111 12444431233333332 5999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 95 ~A~~ 98 (330)
T 2pzm_A 95 SAAA 98 (330)
T ss_dssp CCCC
T ss_pred CCcc
Confidence 9984
|
| >1c1d_A L-phenylalanine dehydrogenase; amino acid dehydrogenase, oxidative deamination mechanism, oxidoreductase; HET: PHE NAD; 1.25A {Rhodococcus SP} SCOP: c.2.1.7 c.58.1.1 PDB: 1bw9_A* 1c1x_A* 1bw9_B* 1c1d_B* 1c1x_B* 1bxg_B* 1bxg_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.019 Score=50.47 Aligned_cols=96 Identities=13% Similarity=0.185 Sum_probs=62.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC--------------chhH-HHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE--------------EPDL-NEAL 215 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~--------------~~~~-~~~i 215 (342)
-+|.+|.|.|. |.||+.+++.++.+|++|++.+.+.++.++.+ ++++..+ +..+ ...+ .+.+
T Consensus 173 L~GktV~I~G~-GnVG~~~A~~l~~~GakVvvsD~~~~~~~~a~-~~ga~~v-~~~ell~~~~DIliP~A~~~~I~~~~~ 249 (355)
T 1c1d_A 173 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTAV-ALEDVLSTPCDVFAPCAMGGVITTEVA 249 (355)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEEC-CGGGGGGCCCSEEEECSCSCCBCHHHH
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEEeCCccHHHHHH-hcCCEEe-ChHHhhcCccceecHhHHHhhcCHHHH
Confidence 57899999996 99999999999999999998887776645555 6776322 1100 0000 1111
Q ss_pred HHHCCCCccEEEeCCChhhH-HHHHHhhhhCCEEEEEc
Q 019332 216 KRYFPEGIDIYFENVGGKML-DAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~~~~-~~~~~~l~~~G~~v~~g 252 (342)
..+ +.++|++++.++.. +.+.+.|..+|.++.-+
T Consensus 250 ~~l---k~~iVie~AN~p~t~~eA~~~L~~~gIlv~Pd 284 (355)
T 1c1d_A 250 RTL---DCSVVAGAANNVIADEAASDILHARGILYAPD 284 (355)
T ss_dssp HHC---CCSEECCSCTTCBCSHHHHHHHHHTTCEECCH
T ss_pred hhC---CCCEEEECCCCCCCCHHHHHHHHhCCEEEECC
Confidence 111 36777777776543 36677788877766533
|
| >2fr1_A Erythromycin synthase, eryai; short chain dehydrogenase/reductase, oxidoreductase; HET: NDP; 1.79A {Saccharopolyspora erythraea} SCOP: c.2.1.2 c.2.1.2 PDB: 2fr0_A* | Back alignment and structure |
|---|
Probab=96.53 E-value=0.014 Score=54.11 Aligned_cols=83 Identities=14% Similarity=0.173 Sum_probs=55.3
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChh---hH----HHHHHHcCCC-ee--EecCCchhHHHHHHH
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD---KI----DLLKNKFGFD-EA--FNYKEEPDLNEALKR 217 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~---~~----~~~~~~~g~~-~v--~~~~~~~~~~~~i~~ 217 (342)
.++++.++||+|++|++|...++.+...|+ +|+.+.++.. +. +.++ +.|.. .+ .|..+...+.+.+.+
T Consensus 222 ~~~~~~~vLITGgtGgIG~~la~~La~~G~~~vvl~~R~~~~~~~~~~l~~~l~-~~g~~v~~~~~Dv~d~~~v~~~~~~ 300 (486)
T 2fr1_A 222 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG 300 (486)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred CcCCCCEEEEECCCCHHHHHHHHHHHHcCCCEEEEEcCCCCCcHHHHHHHHHHH-hcCCEEEEEEeCCCCHHHHHHHHHH
Confidence 357889999999999999998888877799 6999998764 12 2233 44542 11 344444234444444
Q ss_pred HCC-CCccEEEeCCCh
Q 019332 218 YFP-EGIDIYFENVGG 232 (342)
Q Consensus 218 ~~~-~~~d~vid~~g~ 232 (342)
... +.+|.||+++|.
T Consensus 301 i~~~g~ld~VIh~AG~ 316 (486)
T 2fr1_A 301 IGDDVPLSAVFHAAAT 316 (486)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred HHhcCCCcEEEECCcc
Confidence 321 268999999983
|
| >1v8b_A Adenosylhomocysteinase; hydrolase; HET: NAD ADN; 2.40A {Plasmodium falciparum} SCOP: c.2.1.4 c.23.12.3 | Back alignment and structure |
|---|
Probab=96.51 E-value=0.0072 Score=55.33 Aligned_cols=91 Identities=23% Similarity=0.215 Sum_probs=67.9
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
--.|.+|+|.|. |.+|..+++.++.+|++|++..++..+...+. ..|+. +. ++.+.++ ..|+|+-+
T Consensus 254 ~l~GktVgIIG~-G~IG~~vA~~l~~~G~~Viv~d~~~~~~~~a~-~~g~~-~~------~l~ell~-----~aDiVi~~ 319 (479)
T 1v8b_A 254 LISGKIVVICGY-GDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGFN-VV------TLDEIVD-----KGDFFITC 319 (479)
T ss_dssp CCTTSEEEEECC-SHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTCE-EC------CHHHHTT-----TCSEEEEC
T ss_pred ccCCCEEEEEee-CHHHHHHHHHHHhCcCEEEEEeCChhhHHHHH-HcCCE-ec------CHHHHHh-----cCCEEEEC
Confidence 357889999996 99999999999999999999999887653444 45652 21 3333322 38999998
Q ss_pred CCh-hhH-HHHHHhhhhCCEEEEEcee
Q 019332 230 VGG-KML-DAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 230 ~g~-~~~-~~~~~~l~~~G~~v~~g~~ 254 (342)
.+. ..+ ...++.++++..++++|..
T Consensus 320 ~~t~~lI~~~~l~~MK~gailiNvgrg 346 (479)
T 1v8b_A 320 TGNVDVIKLEHLLKMKNNAVVGNIGHF 346 (479)
T ss_dssp CSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred CChhhhcCHHHHhhcCCCcEEEEeCCC
Confidence 766 333 4677889999999998863
|
| >2glx_A 1,5-anhydro-D-fructose reductase; NADP(H) dependent reductase, rossmann-fold, sugar metabolism, 1,5-anhydro-D-mannitol, oxidoreductase; HET: NDP; 2.20A {Ensifer adhaerens} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.09 Score=45.82 Aligned_cols=85 Identities=11% Similarity=0.097 Sum_probs=55.5
Q ss_pred EEEEecCCcHHHHHH-H-HHHHHcCCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLV-G-QFAKLLGCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~a-i-~la~~~ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|.|+|+ |.+|... + .+.+ .+++++++ ++++++.+.+.+++|...++ . ++.+.+. ...+|+|+.|+.
T Consensus 2 ~vgiiG~-G~~g~~~~~~~l~~-~~~~~vav~d~~~~~~~~~~~~~g~~~~~--~---~~~~~l~---~~~~D~V~i~tp 71 (332)
T 2glx_A 2 RWGLIGA-STIAREWVIGAIRA-TGGEVVSMMSTSAERGAAYATENGIGKSV--T---SVEELVG---DPDVDAVYVSTT 71 (332)
T ss_dssp EEEEESC-CHHHHHTHHHHHHH-TTCEEEEEECSCHHHHHHHHHHTTCSCCB--S---CHHHHHT---CTTCCEEEECSC
T ss_pred eEEEEcc-cHHHHHhhhHHhhc-CCCeEEEEECCCHHHHHHHHHHcCCCccc--C---CHHHHhc---CCCCCEEEEeCC
Confidence 5889996 9999875 5 4445 78887755 55666666555477764322 1 3333332 125999999999
Q ss_pred h-hhHHHHHHhhhhCCEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v 249 (342)
. ...+.+..+|+.+-.++
T Consensus 72 ~~~h~~~~~~al~~Gk~v~ 90 (332)
T 2glx_A 72 NELHREQTLAAIRAGKHVL 90 (332)
T ss_dssp GGGHHHHHHHHHHTTCEEE
T ss_pred hhHhHHHHHHHHHCCCeEE
Confidence 8 56667777887765544
|
| >2r6j_A Eugenol synthase 1; phenylpropene, PIP reductase, short-chain dehydrogenase/reductase, plant protein; HET: NDP; 1.50A {Ocimum basilicum} PDB: 2qys_A 2qx7_A* 2qzz_A* 2r2g_A* 3c3x_A* 2qw8_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.0092 Score=51.76 Aligned_cols=91 Identities=18% Similarity=0.153 Sum_probs=59.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHH--HHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLK--NKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~--~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+|||+||+|.+|..+++.+...|.+|++++++.+ +.+.+. ...++.. ..|..+. +.+.+... ++|+||.+
T Consensus 12 ~~ilVtGatG~iG~~l~~~L~~~g~~V~~l~R~~~~~~~~~~~l~~~~v~~v~~Dl~d~----~~l~~a~~-~~d~vi~~ 86 (318)
T 2r6j_A 12 SKILIFGGTGYIGNHMVKGSLKLGHPTYVFTRPNSSKTTLLDEFQSLGAIIVKGELDEH----EKLVELMK-KVDVVISA 86 (318)
T ss_dssp CCEEEETTTSTTHHHHHHHHHHTTCCEEEEECTTCSCHHHHHHHHHTTCEEEECCTTCH----HHHHHHHT-TCSEEEEC
T ss_pred CeEEEECCCchHHHHHHHHHHHCCCcEEEEECCCCchhhHHHHhhcCCCEEEEecCCCH----HHHHHHHc-CCCEEEEC
Confidence 46999999999999999988888999999998874 433332 0345432 2344443 23333333 49999999
Q ss_pred CChh---hHHHHHHhhhhC---CEEE
Q 019332 230 VGGK---MLDAVLLNMKIH---GRIA 249 (342)
Q Consensus 230 ~g~~---~~~~~~~~l~~~---G~~v 249 (342)
++.. ....+++.++.. ++++
T Consensus 87 a~~~~~~~~~~l~~aa~~~g~v~~~v 112 (318)
T 2r6j_A 87 LAFPQILDQFKILEAIKVAGNIKRFL 112 (318)
T ss_dssp CCGGGSTTHHHHHHHHHHHCCCCEEE
T ss_pred CchhhhHHHHHHHHHHHhcCCCCEEE
Confidence 9852 334455555443 3666
|
| >1kpg_A CFA synthase;, cyclopropane-fatty-acyl-phospholipid synthase 1; mixed alpha beta fold, structural genomics, PSI; HET: SAH 16A; 2.00A {Mycobacterium tuberculosis} SCOP: c.66.1.18 PDB: 1kp9_A* 1kph_A* 1tpy_A* 1l1e_A* | Back alignment and structure |
|---|
Probab=96.50 E-value=0.013 Score=50.03 Aligned_cols=100 Identities=11% Similarity=0.063 Sum_probs=67.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
+..++.++.+||-.|. |.|..+..+++..|++|++++.+++..+.+++.+ |...-+..... ++ .+.. +.
T Consensus 58 ~~~~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvd~s~~~~~~a~~~~~~~~~~~~~~~~~~-d~----~~~~-~~ 129 (287)
T 1kpg_A 58 GKLGLQPGMTLLDVGC--GWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQFD-EP 129 (287)
T ss_dssp TTTTCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GGCC-CC
T ss_pred HHcCCCCcCEEEEECC--cccHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCCCCeEEEEC-Ch----hhCC-CC
Confidence 4456789999999984 5588888999777999999999998887777432 32111111111 22 1111 46
Q ss_pred ccEEEeC-----CC--h--hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFEN-----VG--G--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~-----~g--~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+|+.. .+ . ..+..+.++|+|+|+++....
T Consensus 130 fD~v~~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~~ 169 (287)
T 1kpg_A 130 VDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHTI 169 (287)
T ss_dssp CSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEEE
T ss_pred eeEEEEeCchhhcChHHHHHHHHHHHHhcCCCCEEEEEEe
Confidence 9998754 22 1 457788899999999886554
|
| >4e4y_A Short chain dehydrogenase family protein; structural genomics, the center for structural genomics of I diseases, csgid, niaid; 1.80A {Francisella tularensis subsp} | Back alignment and structure |
|---|
Probab=96.50 E-value=0.002 Score=53.82 Aligned_cols=76 Identities=13% Similarity=0.104 Sum_probs=49.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChh-hHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKD-KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+.++||+||++++|.+.++.+.. .|++|+...++++ +.+ +.- ....|..+..++.+.+.....+++|+++++
T Consensus 3 ~~k~vlITGas~gIG~~~a~~l~~~~g~~v~~~~~~~~~~~~----~~~-~~~~Dv~~~~~v~~~~~~~~~~~id~lv~n 77 (244)
T 4e4y_A 3 AMANYLVTGGSKGIGKAVVELLLQNKNHTVINIDIQQSFSAE----NLK-FIKADLTKQQDITNVLDIIKNVSFDGIFLN 77 (244)
T ss_dssp CCEEEEEETTTSHHHHHHHHHHTTSTTEEEEEEESSCCCCCT----TEE-EEECCTTCHHHHHHHHHHTTTCCEEEEEEC
T ss_pred CCCeEEEeCCCChHHHHHHHHHHhcCCcEEEEeccccccccc----cce-EEecCcCCHHHHHHHHHHHHhCCCCEEEEC
Confidence 467899999999999988876655 7889999887654 211 110 012344444233344433333379999999
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
+|.
T Consensus 78 Ag~ 80 (244)
T 4e4y_A 78 AGI 80 (244)
T ss_dssp CCC
T ss_pred Ccc
Confidence 984
|
| >3qp9_A Type I polyketide synthase pikaii; rossmann fold, ketoreductase, epimerization, oxidoreductase; 1.88A {Streptomyces venezuelae} | Back alignment and structure |
|---|
Probab=96.49 E-value=0.011 Score=55.18 Aligned_cols=83 Identities=8% Similarity=0.002 Sum_probs=53.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEE-eCCh-------------hh----HHHHHHHcCCCe---eEecC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGS-AGSK-------------DK----IDLLKNKFGFDE---AFNYK 206 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~-~~s~-------------~~----~~~~~~~~g~~~---v~~~~ 206 (342)
.++++.++||+|++|++|...++.+...|++ |+.+ .++. ++ .+.++ +.|..- ..|-.
T Consensus 247 ~~~~~~~vLITGgsgGIG~~lA~~La~~G~~~vvl~~~R~~~~~~~~~~~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dvt 325 (525)
T 3qp9_A 247 WWQADGTVLVTGAEEPAAAEAARRLARDGAGHLLLHTTPSGSEGAEGTSGAAEDSGLAGLVAELA-DLGATATVVTCDLT 325 (525)
T ss_dssp SSCTTSEEEESSTTSHHHHHHHHHHHHHTCCEEEEEECCCC---------------CHHHHHHHH-HHTCEEEEEECCTT
T ss_pred eecCCCEEEEECCCCcHHHHHHHHHHHcCCCEEEEEeCCCCCCccccccccccCHHHHHHHHHHH-hcCCEEEEEECCCC
Confidence 3578899999999999999988887777985 6676 6662 22 22333 446531 23444
Q ss_pred CchhHHHHHHHHCC-CCccEEEeCCCh
Q 019332 207 EEPDLNEALKRYFP-EGIDIYFENVGG 232 (342)
Q Consensus 207 ~~~~~~~~i~~~~~-~~~d~vid~~g~ 232 (342)
+...+.+.+.+... +.+|.+|+++|.
T Consensus 326 d~~~v~~~~~~i~~~g~id~vVh~AGv 352 (525)
T 3qp9_A 326 DAEAAARLLAGVSDAHPLSAVLHLPPT 352 (525)
T ss_dssp SHHHHHHHHHTSCTTSCEEEEEECCCC
T ss_pred CHHHHHHHHHHHHhcCCCcEEEECCcC
Confidence 44234444444332 269999999983
|
| >1gy8_A UDP-galactose 4-epimerase; oxidoreductase; HET: NAD UDP; 2.0A {Trypanosoma brucei} SCOP: c.2.1.2 PDB: 2cnb_A* | Back alignment and structure |
|---|
Probab=96.49 E-value=0.028 Score=50.30 Aligned_cols=36 Identities=14% Similarity=0.015 Sum_probs=31.2
Q ss_pred CEEEEecCCcHHHHHHHHHHH-HcCCEEEEEeCChhh
Q 019332 154 ECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDK 189 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~-~~ga~Vi~~~~s~~~ 189 (342)
-+|||+||+|.+|..+++.+. ..|++|++++++..+
T Consensus 3 m~vlVTGatG~iG~~l~~~L~~~~g~~V~~~~r~~~~ 39 (397)
T 1gy8_A 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVDSLVGT 39 (397)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEECCTTT
T ss_pred CEEEEECCCCHHHHHHHHHHHHhCCCEEEEEecCCcc
Confidence 479999999999999988887 889999999876543
|
| >1jw9_B Molybdopterin biosynthesis MOEB protein; MOEB: modified rossmann fold, (2) Cys-X-X-Cys zinc-binding M MOAD: ubiquitin-like fold; 1.70A {Escherichia coli} SCOP: c.111.1.1 PDB: 1jwa_B* 1jwb_B* | Back alignment and structure |
|---|
Probab=96.47 E-value=0.0087 Score=50.13 Aligned_cols=34 Identities=18% Similarity=0.166 Sum_probs=29.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~ 187 (342)
+.+|+|.|+ |++|..+++.+...|+ ++++++++.
T Consensus 31 ~~~VlVvG~-Gg~G~~va~~La~~Gv~~i~lvD~d~ 65 (249)
T 1jw9_B 31 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFDT 65 (249)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCCB
T ss_pred CCeEEEEee-CHHHHHHHHHHHHcCCCeEEEEcCCC
Confidence 368999997 9999999999988998 888888776
|
| >1n7h_A GDP-D-mannose-4,6-dehydratase; rossmann fold, SDR, short-chain dehydrogenase/reductase, LYA; HET: NDP GDP; 1.80A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1n7g_A* | Back alignment and structure |
|---|
Probab=96.46 E-value=0.0064 Score=54.27 Aligned_cols=36 Identities=19% Similarity=0.256 Sum_probs=32.1
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
.+|||+||+|.+|..+++.+...|++|++++++..+
T Consensus 29 k~vlVtGatG~IG~~l~~~L~~~g~~V~~~~r~~~~ 64 (381)
T 1n7h_A 29 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRRSSN 64 (381)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSS
T ss_pred CeEEEEcCCchHHHHHHHHHHHCCCEEEEEecCCcc
Confidence 579999999999999999888889999999987653
|
| >2g76_A 3-PGDH, D-3-phosphoglycerate dehydrogenase; oxidoreductase, phosphoglycerate dehydrogenase deficiency, S metabolism, 2-hydroxyacid dehydrogenases; HET: NAD; 1.70A {Homo sapiens} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.009 Score=52.30 Aligned_cols=88 Identities=19% Similarity=0.237 Sum_probs=65.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|+|. |.+|...++.++.+|.+|++..++.++ +.+. ++|+... ++.+.++ ..|+|+.+.
T Consensus 163 l~g~tvgIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~-------~l~ell~-----~aDvV~l~~ 227 (335)
T 2g76_A 163 LNGKTLGILGL-GRIGREVATRMQSFGMKTIGYDPIISP-EVSA-SFGVQQL-------PLEEIWP-----LCDFITVHT 227 (335)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSSCH-HHHH-HTTCEEC-------CHHHHGG-----GCSEEEECC
T ss_pred CCcCEEEEEeE-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCceeC-------CHHHHHh-----cCCEEEEec
Confidence 35789999996 999999999999999999999987665 4455 6776321 3333332 379999887
Q ss_pred Ch-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 231 GG-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
.. + .+ ...++.+++++.+++++.
T Consensus 228 P~t~~t~~li~~~~l~~mk~gailIN~ar 256 (335)
T 2g76_A 228 PLLPSTTGLLNDNTFAQCKKGVRVVNCAR 256 (335)
T ss_dssp CCCTTTTTSBCHHHHTTSCTTEEEEECSC
T ss_pred CCCHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 65 2 12 467788899999888876
|
| >3eey_A Putative rRNA methylase; rRNA methylation, S-adenosyl-methionine, structural genomics structure initiative, PSI; HET: SAM; 2.20A {Clostridium thermocellum atcc 27405} | Back alignment and structure |
|---|
Probab=96.45 E-value=0.0069 Score=48.53 Aligned_cols=102 Identities=18% Similarity=0.194 Sum_probs=66.8
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
..++++++||-.|. |.|..+..+++..+ .+|++++.+++..+.+++. .|...-+..... ++. .+.....+.
T Consensus 18 ~~~~~~~~vLDlGc--G~G~~~~~l~~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~-~~~~~~~~~ 93 (197)
T 3eey_A 18 MFVKEGDTVVDATC--GNGNDTAFLASLVGENGRVFGFDIQDKAIANTTKKLTDLNLIDRVTLIKD-GHQ-NMDKYIDCP 93 (197)
T ss_dssp HHCCTTCEEEESCC--TTSHHHHHHHHHHCTTCEEEEECSCHHHHHHHHHHHHHTTCGGGEEEECS-CGG-GGGGTCCSC
T ss_pred hcCCCCCEEEEcCC--CCCHHHHHHHHHhCCCCEEEEEECCHHHHHHHHHHHHHcCCCCCeEEEEC-CHH-HHhhhccCC
Confidence 45788999999985 44888888998864 5999999999877777632 233111222111 211 111122347
Q ss_pred ccEEEeCCCh----------------hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFENVGG----------------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+|+-..+- ..+..+.+.|+++|+++....
T Consensus 94 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~Lk~gG~l~~~~~ 140 (197)
T 3eey_A 94 VKAVMFNLGYLPSGDHSISTRPETTIQALSKAMELLVTGGIITVVIY 140 (197)
T ss_dssp EEEEEEEESBCTTSCTTCBCCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred ceEEEEcCCcccCcccccccCcccHHHHHHHHHHhCcCCCEEEEEEc
Confidence 9998855421 467888999999999987643
|
| >1id1_A Putative potassium channel protein; RCK domain, E.coli potassium channel, BK channel, rossmann fold, membrane protein; 2.40A {Escherichia coli} SCOP: c.2.1.9 | Back alignment and structure |
|---|
Probab=96.44 E-value=0.045 Score=41.80 Aligned_cols=95 Identities=9% Similarity=0.022 Sum_probs=59.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHHHHc--CCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLKNKF--GFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~~~~--g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
..+++|.|+ |.+|...++.+...|.+|++++++ +++.+.+.+.+ |. .++.-+. .-.+.+++..-.++|.++-+
T Consensus 3 ~~~vlI~G~-G~vG~~la~~L~~~g~~V~vid~~~~~~~~~~~~~~~~~~-~~i~gd~--~~~~~l~~a~i~~ad~vi~~ 78 (153)
T 1id1_A 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGDS--NDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESCT--TSHHHHHHHTTTTCSEEEEC
T ss_pred CCcEEEECC-CHHHHHHHHHHHHCCCCEEEEECCChHHHHHHHHhhcCCC-eEEEcCC--CCHHHHHHcChhhCCEEEEe
Confidence 457999996 999999999999999999999987 45555554233 33 2332221 11234554433469999999
Q ss_pred CChhhHHH----HHHhhhhCCEEEEE
Q 019332 230 VGGKMLDA----VLLNMKIHGRIAVC 251 (342)
Q Consensus 230 ~g~~~~~~----~~~~l~~~G~~v~~ 251 (342)
.+.+..+. ..+.+.+..+++..
T Consensus 79 ~~~d~~n~~~~~~a~~~~~~~~ii~~ 104 (153)
T 1id1_A 79 SDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred cCChHHHHHHHHHHHHHCCCCEEEEE
Confidence 98743332 22333344566653
|
| >3vps_A TUNA, NAD-dependent epimerase/dehydratase; tunicamycins, biosynthesis, EXO-glycal, rossman transferase; HET: UD1 NAD; 1.90A {Streptomyces chartreusis} | Back alignment and structure |
|---|
Probab=96.42 E-value=0.002 Score=55.96 Aligned_cols=36 Identities=14% Similarity=0.119 Sum_probs=32.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
+.+|||+||+|.+|..+++.+...|.+|++++++..
T Consensus 7 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 42 (321)
T 3vps_A 7 KHRILITGGAGFIGGHLARALVASGEEVTVLDDLRV 42 (321)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCCEEEECCCSS
T ss_pred CCeEEEECCCChHHHHHHHHHHHCCCEEEEEecCCc
Confidence 568999999999999999999888999999998765
|
| >2dbq_A Glyoxylate reductase; D-3-phosphoglycerate dehydrogenase, ST genomics, NPPSFA; HET: NAP; 1.70A {Pyrococcus horikoshii} PDB: 2dbr_A* 2dbz_A* | Back alignment and structure |
|---|
Probab=96.42 E-value=0.021 Score=49.99 Aligned_cols=88 Identities=17% Similarity=0.209 Sum_probs=64.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.+.+|.|+|. |.+|...++.++..|.+|++..++.++ +.+. ++|... . ++.+.+++ .|+|+.++
T Consensus 148 l~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~~~l~~-----aDvVil~v 212 (334)
T 2dbq_A 148 VYGKTIGIIGL-GRIGQAIAKRAKGFNMRILYYSRTRKE-EVER-ELNAEF----K---PLEDLLRE-----SDFVVLAV 212 (334)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCH-HHHH-HHCCEE----C---CHHHHHHH-----CSEEEECC
T ss_pred CCCCEEEEEcc-CHHHHHHHHHHHhCCCEEEEECCCcch-hhHh-hcCccc----C---CHHHHHhh-----CCEEEECC
Confidence 35679999996 999999999999999999999988877 5555 667521 1 33334443 78998888
Q ss_pred Ch-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 231 GG-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
.. . .+ ...+..++++..++.++.
T Consensus 213 p~~~~t~~~i~~~~~~~mk~~ailIn~sr 241 (334)
T 2dbq_A 213 PLTRETYHLINEERLKLMKKTAILINIAR 241 (334)
T ss_dssp CCCTTTTTCBCHHHHHHSCTTCEEEECSC
T ss_pred CCChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 75 2 12 356677888888887764
|
| >3pwz_A Shikimate dehydrogenase 3; alpha-beta, oxidoreductase; 1.71A {Pseudomonas putida} | Back alignment and structure |
|---|
Probab=96.41 E-value=0.02 Score=48.57 Aligned_cols=90 Identities=13% Similarity=0.020 Sum_probs=61.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC--CeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF--DEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++. ..+..+. ++. . ..+|+|++
T Consensus 119 ~~k~~lvlGa-Gg~~~aia~~L~~~G~~~v~i~~R~~~~a~~la~~~~~~~~~~~~~~---~l~----~---~~~DivIn 187 (272)
T 3pwz_A 119 RNRRVLLLGA-GGAVRGALLPFLQAGPSELVIANRDMAKALALRNELDHSRLRISRYE---ALE----G---QSFDIVVN 187 (272)
T ss_dssp TTSEEEEECC-SHHHHHHHHHHHHTCCSEEEEECSCHHHHHHHHHHHCCTTEEEECSG---GGT----T---CCCSEEEE
T ss_pred cCCEEEEECc-cHHHHHHHHHHHHcCCCEEEEEeCCHHHHHHHHHHhccCCeeEeeHH---Hhc----c---cCCCEEEE
Confidence 5789999997 9999999988888997 999999999988766646653 1223222 211 1 35999999
Q ss_pred CCChhhHHH----HHHhhhhCCEEEEEc
Q 019332 229 NVGGKMLDA----VLLNMKIHGRIAVCG 252 (342)
Q Consensus 229 ~~g~~~~~~----~~~~l~~~G~~v~~g 252 (342)
|.+...... -.+.++++..++.+-
T Consensus 188 aTp~gm~~~~~~i~~~~l~~~~~V~Dlv 215 (272)
T 3pwz_A 188 ATSASLTADLPPLPADVLGEAALAYELA 215 (272)
T ss_dssp CSSGGGGTCCCCCCGGGGTTCSEEEESS
T ss_pred CCCCCCCCCCCCCCHHHhCcCCEEEEee
Confidence 987532110 123566666666553
|
| >3ko8_A NAD-dependent epimerase/dehydratase; isomerase, UDP-galactose 4-epimerase; HET: NAD; 1.80A {Pyrobaculum calidifontis} SCOP: c.2.1.0 PDB: 3icp_A* 3aw9_A* | Back alignment and structure |
|---|
Probab=96.41 E-value=0.0049 Score=53.31 Aligned_cols=69 Identities=14% Similarity=0.111 Sum_probs=46.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|.+|..+++.+...|++|++++++.++..... ..+... ..|..+. + +.+... + |+||++++
T Consensus 2 ~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~~~~~~~Dl~d~-~----~~~~~~-~-d~vih~A~ 71 (312)
T 3ko8_A 2 RIVVTGGAGFIGSHLVDKLVELGYEVVVVDNLSSGRREFV-NPSAELHVRDLKDY-S----WGAGIK-G-DVVFHFAA 71 (312)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEECCCSSCCGGGS-CTTSEEECCCTTST-T----TTTTCC-C-SEEEECCS
T ss_pred EEEEECCCChHHHHHHHHHHhCCCEEEEEeCCCCCchhhc-CCCceEEECccccH-H----HHhhcC-C-CEEEECCC
Confidence 6999999999999999999889999999998765432211 112211 1233332 1 333333 2 99999998
|
| >1i9g_A Hypothetical protein RV2118C; mtase, adoMet, crystal, structural genomics, protein structure initiative; HET: SAM; 1.98A {Mycobacterium tuberculosis} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.40 E-value=0.011 Score=50.31 Aligned_cols=102 Identities=19% Similarity=0.190 Sum_probs=69.6
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHc----C--CCeeEecCCchhHHHHHHH
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKF----G--FDEAFNYKEEPDLNEALKR 217 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~----g--~~~v~~~~~~~~~~~~i~~ 217 (342)
....+.++++||-.|+ | .|..+..+++.. +.+|++++.+++..+.+++.+ | ... +..... +..+. .
T Consensus 93 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~g~~~~~-v~~~~~-d~~~~--~ 166 (280)
T 1i9g_A 93 HEGDIFPGARVLEAGA-G-SGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDN-WRLVVS-DLADS--E 166 (280)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTT-EEEECS-CGGGC--C
T ss_pred HHcCCCCCCEEEEEcc-c-ccHHHHHHHHHhCCCCEEEEEeCCHHHHHHHHHHHHHhcCCCCCc-EEEEEC-chHhc--C
Confidence 4567899999999995 4 788889999875 569999999998877776332 4 222 111111 21111 0
Q ss_pred HCCCCccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 218 YFPEGIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 218 ~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
...+.+|+|+..... ..+..+.++|+++|+++.+..
T Consensus 167 ~~~~~~D~v~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 204 (280)
T 1i9g_A 167 LPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 204 (280)
T ss_dssp CCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred CCCCceeEEEECCcCHHHHHHHHHHhCCCCCEEEEEeC
Confidence 112369998865544 578899999999999987654
|
| >1l3i_A Precorrin-6Y methyltransferase/putative decarboxylase; structural genomics, beta barrel, rossmann fold, tetramer; HET: SAH; 1.95A {Methanothermobacterthermautotrophicus} SCOP: c.66.1.22 PDB: 1kxz_A 1l3b_A 1f38_A 1l3c_A* | Back alignment and structure |
|---|
Probab=96.40 E-value=0.013 Score=46.32 Aligned_cols=101 Identities=21% Similarity=0.250 Sum_probs=67.5
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
....+.++.+||-.|+ | .|..+..+++.. .+|++++.+++..+.+++. .+...-+..... ++.+.+... +.
T Consensus 27 ~~~~~~~~~~vldiG~-G-~G~~~~~l~~~~-~~v~~~D~~~~~~~~a~~~~~~~~~~~~~~~~~~-d~~~~~~~~--~~ 100 (192)
T 1l3i_A 27 CLAEPGKNDVAVDVGC-G-TGGVTLELAGRV-RRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCKI--PD 100 (192)
T ss_dssp HHHCCCTTCEEEEESC-T-TSHHHHHHHTTS-SEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTTS--CC
T ss_pred HhcCCCCCCEEEEECC-C-CCHHHHHHHHhc-CEEEEEECCHHHHHHHHHHHHHcCCCcceEEEec-CHHHhcccC--CC
Confidence 4457889999999995 4 388888888776 8999999999877777632 343111222222 333322211 36
Q ss_pred ccEEEeCCC----hhhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENVG----GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~g----~~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+|+.... ...+..+.+.|+++|+++...
T Consensus 101 ~D~v~~~~~~~~~~~~l~~~~~~l~~gG~l~~~~ 134 (192)
T 1l3i_A 101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (192)
T ss_dssp EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CCEEEECCchHHHHHHHHHHHHhcCCCcEEEEEe
Confidence 999986654 246777888999999988654
|
| >3mti_A RRNA methylase; SAM-dependent, PSI, MCSG, structural genomics, midwest cente structural genomics, protein structure initiative; 1.95A {Streptococcus thermophilus} PDB: 3lby_A* | Back alignment and structure |
|---|
Probab=96.38 E-value=0.012 Score=46.58 Aligned_cols=98 Identities=18% Similarity=0.215 Sum_probs=65.6
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC--eeEecCCchhHHHHHHHHCCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD--EAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~--~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
..++++++||=.|. |.|..+..+++. +.+|++++.+++-.+.+++. .|.. .++. .+. ..+.....+.
T Consensus 18 ~~~~~~~~vLDiGc--G~G~~~~~la~~-~~~v~~vD~s~~~l~~a~~~~~~~~~~~v~~~~-~~~----~~l~~~~~~~ 89 (185)
T 3mti_A 18 EVLDDESIVVDATM--GNGNDTAFLAGL-SKKVYAFDVQEQALGKTSQRLSDLGIENTELIL-DGH----ENLDHYVREP 89 (185)
T ss_dssp TTCCTTCEEEESCC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHHTCCCEEEEE-SCG----GGGGGTCCSC
T ss_pred HhCCCCCEEEEEcC--CCCHHHHHHHHh-CCEEEEEECCHHHHHHHHHHHHHcCCCcEEEEe-CcH----HHHHhhccCC
Confidence 46789999999884 568888888887 88999999999877776632 3432 2232 111 1122223346
Q ss_pred ccEEEeCCCh----------------hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFENVGG----------------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+|+-..+. ..+..+.+.|+|+|+++.+..
T Consensus 90 fD~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 136 (185)
T 3mti_A 90 IRAAIFNLGYLPSADKSVITKPHTTLEAIEKILDRLEVGGRLAIMIY 136 (185)
T ss_dssp EEEEEEEEC-----------CHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCEEEEeCCCCCCcchhcccChhhHHHHHHHHHHhcCCCcEEEEEEe
Confidence 9998755321 235778899999999987644
|
| >3sc6_A DTDP-4-dehydrorhamnose reductase; RFBD, structural genomics, infectious diseases, bacillus anthracis STR. AMES, rhamnose biosynthetic pathway; HET: NAP; 2.65A {Bacillus anthracis} SCOP: c.2.1.0 | Back alignment and structure |
|---|
Probab=96.38 E-value=0.011 Score=50.47 Aligned_cols=82 Identities=9% Similarity=0.063 Sum_probs=54.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|||+||+|.+|..+++.+...|++|+++++.. .|..+...+.+.+.+. ++|+||++++...
T Consensus 7 ~ilVtGatG~iG~~l~~~L~~~g~~V~~~~r~~---------------~D~~d~~~~~~~~~~~---~~d~vi~~a~~~~ 68 (287)
T 3sc6_A 7 RVIITGANGQLGKQLQEELNPEEYDIYPFDKKL---------------LDITNISQVQQVVQEI---RPHIIIHCAAYTK 68 (287)
T ss_dssp EEEEESTTSHHHHHHHHHSCTTTEEEEEECTTT---------------SCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEecccc---------------cCCCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence 799999999999999998888899999998721 2222321333333322 5899999887411
Q ss_pred ------------------HHHHHHhh-hhCCEEEEEcee
Q 019332 235 ------------------LDAVLLNM-KIHGRIAVCGMI 254 (342)
Q Consensus 235 ------------------~~~~~~~l-~~~G~~v~~g~~ 254 (342)
...+++.+ +.+.+++.+++.
T Consensus 69 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~~v~~SS~ 107 (287)
T 3sc6_A 69 VDQAEKERDLAYVINAIGARNVAVASQLVGAKLVYISTD 107 (287)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHHHHTCEEEEEEEG
T ss_pred hHHHhcCHHHHHHHHHHHHHHHHHHHHHcCCeEEEEchh
Confidence 12233333 336688888764
|
| >3phh_A Shikimate dehydrogenase; shikimate pathway, helicobacter PYL oxidoreductase, alpha/beta domain, rossmann fold; HET: SKM; 1.42A {Helicobacter pylori} PDB: 3phg_A* 3phi_A* 3phj_A* 4foo_A 4fpx_A 4fos_A* 4fr5_A* 4fq8_A* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.015 Score=49.03 Aligned_cols=86 Identities=15% Similarity=0.130 Sum_probs=63.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+.+++|+|+ |++|.+++..+...|.+|++..|+.+|.+.+. +++. ....+.+. . .+|+|++|...
T Consensus 118 ~k~vlvlGa-GGaaraia~~L~~~G~~v~V~nRt~~ka~~la-~~~~-~~~~~~~l-~-----------~~DiVInaTp~ 182 (269)
T 3phh_A 118 YQNALILGA-GGSAKALACELKKQGLQVSVLNRSSRGLDFFQ-RLGC-DCFMEPPK-S-----------AFDLIINATSA 182 (269)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCTTHHHHH-HHTC-EEESSCCS-S-----------CCSEEEECCTT
T ss_pred CCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHH-HCCC-eEecHHHh-c-----------cCCEEEEcccC
Confidence 789999997 99999999988888999999999999988887 7885 33333321 0 48999998764
Q ss_pred h-----hH--HHHHHhhhhCCEEEEEce
Q 019332 233 K-----ML--DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 233 ~-----~~--~~~~~~l~~~G~~v~~g~ 253 (342)
. .+ ..+...++++..++++..
T Consensus 183 Gm~~~~~l~~~~l~~~l~~~~~v~D~vY 210 (269)
T 3phh_A 183 SLHNELPLNKEVLKGYFKEGKLAYDLAY 210 (269)
T ss_dssp CCCCSCSSCHHHHHHHHHHCSEEEESCC
T ss_pred CCCCCCCCChHHHHhhCCCCCEEEEeCC
Confidence 2 12 122336778877776644
|
| >3o8q_A Shikimate 5-dehydrogenase I alpha; structural genomics, center for structural genomics of infec diseases, csgid; HET: EPE; 1.45A {Vibrio cholerae biovar el tor} PDB: 3sef_A* 3pgj_A* 3o8q_B* | Back alignment and structure |
|---|
Probab=96.36 E-value=0.019 Score=48.95 Aligned_cols=70 Identities=13% Similarity=0.117 Sum_probs=52.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC---CeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF---DEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
.+.+++|+|+ |++|.+++..+...|+ +|++..|+.++.+.+.++++. ..+.++.+ + . ..+|+|+
T Consensus 125 ~~k~vlvlGa-Gg~g~aia~~L~~~G~~~v~v~~R~~~~a~~la~~~~~~~~~~~~~~~~---l-------~-~~aDiII 192 (281)
T 3o8q_A 125 KGATILLIGA-GGAARGVLKPLLDQQPASITVTNRTFAKAEQLAELVAAYGEVKAQAFEQ---L-------K-QSYDVII 192 (281)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTCCSEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG---C-------C-SCEEEEE
T ss_pred cCCEEEEECc-hHHHHHHHHHHHhcCCCeEEEEECCHHHHHHHHHHhhccCCeeEeeHHH---h-------c-CCCCEEE
Confidence 5789999997 9999999988888997 999999999887766545553 12333321 1 1 3599999
Q ss_pred eCCChh
Q 019332 228 ENVGGK 233 (342)
Q Consensus 228 d~~g~~ 233 (342)
+|.+..
T Consensus 193 naTp~g 198 (281)
T 3o8q_A 193 NSTSAS 198 (281)
T ss_dssp ECSCCC
T ss_pred EcCcCC
Confidence 998753
|
| >1db3_A GDP-mannose 4,6-dehydratase; NADP, GDP-fucose, lyase; 2.30A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.35 E-value=0.0068 Score=53.83 Aligned_cols=36 Identities=19% Similarity=0.300 Sum_probs=29.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
.+|||+||+|.+|..+++.+...|++|++++++.++
T Consensus 2 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~ 37 (372)
T 1db3_A 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRASS 37 (372)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC----
T ss_pred CEEEEECCCChHHHHHHHHHHHCCCEEEEEECCCcc
Confidence 579999999999999999888889999999987653
|
| >2ggs_A 273AA long hypothetical DTDP-4-dehydrorhamnose reductase; alpha, beta, oxidoreductase; HET: NDP; 1.70A {Sulfolobus tokodaii} | Back alignment and structure |
|---|
Probab=96.35 E-value=0.013 Score=49.48 Aligned_cols=89 Identities=15% Similarity=0.146 Sum_probs=57.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|||+||+|.+|..+++.+.. |++|++++++++. + . + ...|..+...+.+.++.. .+|+||+++|...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~~-g~~V~~~~r~~~~-~--~---~--~~~Dl~~~~~~~~~~~~~---~~d~vi~~a~~~~ 69 (273)
T 2ggs_A 2 RTLITGASGQLGIELSRLLSE-RHEVIKVYNSSEI-Q--G---G--YKLDLTDFPRLEDFIIKK---RPDVIINAAAMTD 69 (273)
T ss_dssp CEEEETTTSHHHHHHHHHHTT-TSCEEEEESSSCC-T--T---C--EECCTTSHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred EEEEECCCChhHHHHHHHHhc-CCeEEEecCCCcC-C--C---C--ceeccCCHHHHHHHHHhc---CCCEEEECCcccC
Confidence 589999999999998888774 8999999987642 1 1 2 234444431333333322 5899999998411
Q ss_pred ------------------HHHHHHhh-hhCCEEEEEceec
Q 019332 235 ------------------LDAVLLNM-KIHGRIAVCGMIS 255 (342)
Q Consensus 235 ------------------~~~~~~~l-~~~G~~v~~g~~~ 255 (342)
...+++.+ +.+++++.+++..
T Consensus 70 ~~~~~~~~~~~~~~n~~~~~~l~~~~~~~~~~iv~~SS~~ 109 (273)
T 2ggs_A 70 VDKCEIEKEKAYKINAEAVRHIVRAGKVIDSYIVHISTDY 109 (273)
T ss_dssp HHHHHHCHHHHHHHHTHHHHHHHHHHHHTTCEEEEEEEGG
T ss_pred hhhhhhCHHHHHHHhHHHHHHHHHHHHHhCCeEEEEecce
Confidence 12233333 3457998887654
|
| >1oc2_A DTDP-glucose 4,6-dehydratase; lyase, NADH, rhamnose; HET: TDX NAD; 1.5A {Streptococcus suis} SCOP: c.2.1.2 PDB: 1ker_A* 1ket_A* 1kep_A* | Back alignment and structure |
|---|
Probab=96.35 E-value=0.014 Score=51.32 Aligned_cols=73 Identities=11% Similarity=0.044 Sum_probs=46.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChh--hHHHHHHHcCCC--ee--EecCCchhHHHHHHHHCCCCccE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKD--KIDLLKNKFGFD--EA--FNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~--~~~~~~~~~g~~--~v--~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
.+|||+||+|.+|..+++.+... |++|++++++.. ..+.+. ++... .+ .|..+. +.+.+... ++|+
T Consensus 5 ~~vlVTGatG~iG~~l~~~L~~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~----~~~~~~~~-~~d~ 78 (348)
T 1oc2_A 5 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLDKLTYAGNKANLE-AILGDRVELVVGDIADA----ELVDKLAA-KADA 78 (348)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEECCCTTCCGGGTG-GGCSSSEEEEECCTTCH----HHHHHHHT-TCSE
T ss_pred cEEEEeCCccHHHHHHHHHHHHhCCCCEEEEEeCCCCCCChhHHh-hhccCCeEEEECCCCCH----HHHHHHhh-cCCE
Confidence 47999999999999988877766 889999998642 112222 22111 11 233332 23333332 3799
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
||.++|.
T Consensus 79 vih~A~~ 85 (348)
T 1oc2_A 79 IVHYAAE 85 (348)
T ss_dssp EEECCSC
T ss_pred EEECCcc
Confidence 9999984
|
| >1ff9_A Saccharopine reductase; lysine biosynthesis, alpha-aminoadipate pathway, dehydrogenase, oxidoreductase; 2.00A {Magnaporthe grisea} SCOP: c.2.1.3 d.81.1.2 PDB: 1e5l_A* 1e5q_A | Back alignment and structure |
|---|
Probab=96.33 E-value=0.029 Score=51.27 Aligned_cols=93 Identities=11% Similarity=0.091 Sum_probs=60.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+.+|+|+| +|++|.+.++.+...|++|++..++.++.+.+.++++.... +|..+. +.+.+... ++|+|++|+
T Consensus 3 ~k~VlViG-aG~iG~~ia~~L~~~G~~V~v~~R~~~~a~~la~~~~~~~~~~~Dv~d~----~~l~~~l~-~~DvVIn~a 76 (450)
T 1ff9_A 3 TKSVLMLG-SGFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTPISLDVNDD----AALDAEVA-KHDLVISLI 76 (450)
T ss_dssp CCEEEEEC-CSTTHHHHHHHHHTTTCEEEEEESSHHHHHHTTTTCTTEEEEECCTTCH----HHHHHHHT-TSSEEEECC
T ss_pred CCEEEEEC-CCHHHHHHHHHHHhCcCEEEEEECCHHHHHHHHHhcCCceEEEeecCCH----HHHHHHHc-CCcEEEECC
Confidence 46899998 59999998888888899999999988776655423432111 233332 12222222 599999999
Q ss_pred Chh-hHHHHHHhhhhCCEEEEE
Q 019332 231 GGK-MLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 231 g~~-~~~~~~~~l~~~G~~v~~ 251 (342)
+.. .......++.++..+++.
T Consensus 77 ~~~~~~~i~~a~l~~g~~vvd~ 98 (450)
T 1ff9_A 77 PYTFHATVIKSAIRQKKHVVTT 98 (450)
T ss_dssp C--CHHHHHHHHHHHTCEEEES
T ss_pred ccccchHHHHHHHhCCCeEEEe
Confidence 863 333345667777776654
|
| >2q1s_A Putative nucleotide sugar epimerase/ dehydratase; rossman fold, protein-NADH complex, sugar binding protein; HET: NAI; 1.50A {Bordetella bronchiseptica} PDB: 2pzj_A* 2q1t_A* 2q1u_A* | Back alignment and structure |
|---|
Probab=96.33 E-value=0.016 Score=51.57 Aligned_cols=72 Identities=14% Similarity=0.009 Sum_probs=49.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHc--CCC-eeE--ecCCchhHHHHHHHHCCCCccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKF--GFD-EAF--NYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~--g~~-~v~--~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
+.+|||+||+|.+|..+++.+...| .+|++++++..+.. . .+ ... .++ |..+ .+.+.+... ++|+|
T Consensus 32 ~~~ilVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~--~-~l~~~~~v~~~~~Dl~d----~~~l~~~~~-~~d~V 103 (377)
T 2q1s_A 32 NTNVMVVGGAGFVGSNLVKRLLELGVNQVHVVDNLLSAEK--I-NVPDHPAVRFSETSITD----DALLASLQD-EYDYV 103 (377)
T ss_dssp TCEEEEETTTSHHHHHHHHHHHHTTCSEEEEECCCTTCCG--G-GSCCCTTEEEECSCTTC----HHHHHHCCS-CCSEE
T ss_pred CCEEEEECCccHHHHHHHHHHHHcCCceEEEEECCCCCch--h-hccCCCceEEEECCCCC----HHHHHHHhh-CCCEE
Confidence 4689999999999999999888889 99999998765321 1 12 111 122 3322 234444443 69999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|.+++.
T Consensus 104 ih~A~~ 109 (377)
T 2q1s_A 104 FHLATY 109 (377)
T ss_dssp EECCCC
T ss_pred EECCCc
Confidence 999884
|
| >1u7z_A Coenzyme A biosynthesis bifunctional protein coabc; ligase; HET: PMT; 2.30A {Escherichia coli} SCOP: c.72.3.1 PDB: 1u7w_A* 1u7u_A* 1u80_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.0088 Score=49.01 Aligned_cols=75 Identities=15% Similarity=0.157 Sum_probs=51.4
Q ss_pred CCCEEEEecC----------------CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 152 QGECVFISAA----------------SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 152 ~~~~vlI~ga----------------~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
.|.+|||+|| +|++|.+.++.+...|++|+.+.++.. .+. ..|. .+++.....++.+.+
T Consensus 7 ~gk~vlVTgG~T~E~iDpVR~itN~SSg~iG~aiA~~~~~~Ga~V~l~~~~~~-l~~---~~g~-~~~dv~~~~~~~~~v 81 (226)
T 1u7z_A 7 KHLNIMITAGPTREPLDPVRYISDHSSGKMGFAIAAAAARRGANVTLVSGPVS-LPT---PPFV-KRVDVMTALEMEAAV 81 (226)
T ss_dssp TTCEEEEEESBCEEESSSSEEEEECCCSHHHHHHHHHHHHTTCEEEEEECSCC-CCC---CTTE-EEEECCSHHHHHHHH
T ss_pred CCCEEEEECCCCCcccCceeeccCCCccHHHHHHHHHHHHCCCEEEEEECCcc-ccc---CCCC-eEEccCcHHHHHHHH
Confidence 5789999999 589999999999999999999876542 110 1122 345554432444444
Q ss_pred HHHCCCCccEEEeCCCh
Q 019332 216 KRYFPEGIDIYFENVGG 232 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~ 232 (342)
.+.. +.+|++++++|-
T Consensus 82 ~~~~-~~~Dili~~Aav 97 (226)
T 1u7z_A 82 NASV-QQQNIFIGCAAV 97 (226)
T ss_dssp HHHG-GGCSEEEECCBC
T ss_pred HHhc-CCCCEEEECCcc
Confidence 4433 359999999885
|
| >3q2i_A Dehydrogenase; rossmann fold, UDP-sugar binding, NAD binding oxidoreductase; HET: NAD HP7; 1.50A {Chromobacterium violaceum} PDB: 3q2k_A* | Back alignment and structure |
|---|
Probab=96.32 E-value=0.18 Score=44.45 Aligned_cols=87 Identities=7% Similarity=-0.028 Sum_probs=59.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc--CCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL--GCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-+|.|+|. |.+|...+...+.. +++++++ ++++++.+.+.+++|+ .++ . ++.+.+.+ ..+|+|+.|.
T Consensus 14 ~rvgiiG~-G~~g~~~~~~l~~~~~~~~lvav~d~~~~~~~~~~~~~~~-~~~--~---~~~~ll~~---~~~D~V~i~t 83 (354)
T 3q2i_A 14 IRFALVGC-GRIANNHFGALEKHADRAELIDVCDIDPAALKAAVERTGA-RGH--A---SLTDMLAQ---TDADIVILTT 83 (354)
T ss_dssp EEEEEECC-STTHHHHHHHHHHTTTTEEEEEEECSSHHHHHHHHHHHCC-EEE--S---CHHHHHHH---CCCSEEEECS
T ss_pred ceEEEEcC-cHHHHHHHHHHHhCCCCeEEEEEEcCCHHHHHHHHHHcCC-cee--C---CHHHHhcC---CCCCEEEECC
Confidence 47999996 99998777666655 7787755 4566666665547886 332 2 44444443 2599999999
Q ss_pred Ch-hhHHHHHHhhhhCCEEEE
Q 019332 231 GG-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 231 g~-~~~~~~~~~l~~~G~~v~ 250 (342)
.. ...+.+..++..+-.+++
T Consensus 84 p~~~h~~~~~~al~~gk~v~~ 104 (354)
T 3q2i_A 84 PSGLHPTQSIECSEAGFHVMT 104 (354)
T ss_dssp CGGGHHHHHHHHHHTTCEEEE
T ss_pred CcHHHHHHHHHHHHCCCCEEE
Confidence 98 566777788887766543
|
| >1kew_A RMLB;, DTDP-D-glucose 4,6-dehydratase; rossmann fold, lyase; HET: TYD NAD; 1.80A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1g1a_A* 1keu_A* 1bxk_A* | Back alignment and structure |
|---|
Probab=96.31 E-value=0.0075 Score=53.31 Aligned_cols=74 Identities=11% Similarity=0.106 Sum_probs=45.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCh--hhHHHHHHHc--CCC-ee--EecCCchhHHHHHHHHCCCCccEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSK--DKIDLLKNKF--GFD-EA--FNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~--~~~~~~~~~~--g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
+|||+||+|.+|..+++.+... |++|++++++. .+.+.+. ++ +.. .+ .|..+...+.+.+++ .++|+|
T Consensus 2 kvlVTGasG~iG~~l~~~L~~~~g~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~---~~~d~v 77 (361)
T 1kew_A 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNIDKLTYAGNLESLS-DISESNRYNFEHADICDSAEITRIFEQ---YQPDAV 77 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHH---HCCSEE
T ss_pred EEEEECCCchHhHHHHHHHHhcCCCeEEEEecCCCCCchhhhh-hhhcCCCeEEEECCCCCHHHHHHHHhh---cCCCEE
Confidence 5999999999999988777666 78999998754 2222222 22 111 11 244443123333322 259999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|+++|.
T Consensus 78 ih~A~~ 83 (361)
T 1kew_A 78 MHLAAE 83 (361)
T ss_dssp EECCSC
T ss_pred EECCCC
Confidence 999884
|
| >1t2a_A GDP-mannose 4,6 dehydratase; structural genomics consortium, rossman-fold, short-chain dehydrogenase/reductase, SDR, structural genomics,lyase; HET: NDP GDP; 1.84A {Homo sapiens} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.31 E-value=0.009 Score=53.18 Aligned_cols=35 Identities=20% Similarity=0.305 Sum_probs=31.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.+|||+||+|.+|..+++.+...|++|++++++.+
T Consensus 25 ~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~ 59 (375)
T 1t2a_A 25 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRSS 59 (375)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCS
T ss_pred cEEEEECCCchHHHHHHHHHHHCCCEEEEEECCcc
Confidence 57999999999999999988888999999998754
|
| >3l9w_A Glutathione-regulated potassium-efflux system Pro linker, ancillary protein KEFF; potassium channel regulation, domains, antiport; HET: FMN AMP GSH; 1.75A {Escherichia coli} PDB: 3eyw_A* 3l9x_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.051 Score=49.02 Aligned_cols=94 Identities=19% Similarity=0.263 Sum_probs=67.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-ecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-NYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
...|+|.|. |-+|+.+++.++..|..|++++.++++.+.++ +.|...++ |..+ .+.+++..-..+|+++-+.+
T Consensus 4 ~~~viIiG~-Gr~G~~va~~L~~~g~~vvvId~d~~~v~~~~-~~g~~vi~GDat~----~~~L~~agi~~A~~viv~~~ 77 (413)
T 3l9w_A 4 GMRVIIAGF-GRFGQITGRLLLSSGVKMVVLDHDPDHIETLR-KFGMKVFYGDATR----MDLLESAGAAKAEVLINAID 77 (413)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEECCHHHHHHHH-HTTCCCEESCTTC----HHHHHHTTTTTCSEEEECCS
T ss_pred CCeEEEECC-CHHHHHHHHHHHHCCCCEEEEECCHHHHHHHH-hCCCeEEEcCCCC----HHHHHhcCCCccCEEEECCC
Confidence 456999997 99999999999999999999999999999988 88874332 3333 23455443337999999999
Q ss_pred hhhH----HHHHHhhhhCCEEEEEc
Q 019332 232 GKML----DAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 232 ~~~~----~~~~~~l~~~G~~v~~g 252 (342)
.+.. ....+.+.+..+++.-.
T Consensus 78 ~~~~n~~i~~~ar~~~p~~~Iiara 102 (413)
T 3l9w_A 78 DPQTNLQLTEMVKEHFPHLQIIARA 102 (413)
T ss_dssp SHHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred ChHHHHHHHHHHHHhCCCCeEEEEE
Confidence 7322 23334455666666543
|
| >4hkt_A Inositol 2-dehydrogenase; structural genomics, nysgrc, PSI-biology, NEW YORK structura genomics research consortium, oxidoreductase; HET: MSE; 2.00A {Sinorhizobium meliloti} | Back alignment and structure |
|---|
Probab=96.26 E-value=0.23 Score=43.17 Aligned_cols=84 Identities=11% Similarity=0.081 Sum_probs=57.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|.|+|. |.+|...+..++.. +++++++ ++++++.+.+.+++|.. +. ++.+.+.+ ..+|+|+.|+..
T Consensus 5 ~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~----~~---~~~~~l~~---~~~D~V~i~tp~ 73 (331)
T 4hkt_A 5 RFGLLGA-GRIGKVHAKAVSGNADARLVAVADAFPAAAEAIAGAYGCE----VR---TIDAIEAA---ADIDAVVICTPT 73 (331)
T ss_dssp EEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCE----EC---CHHHHHHC---TTCCEEEECSCG
T ss_pred EEEEECC-CHHHHHHHHHHhhCCCcEEEEEECCCHHHHHHHHHHhCCC----cC---CHHHHhcC---CCCCEEEEeCCc
Confidence 6899996 99998777766654 7788754 55666666555477764 32 44444431 259999999998
Q ss_pred -hhHHHHHHhhhhCCEEE
Q 019332 233 -KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 233 -~~~~~~~~~l~~~G~~v 249 (342)
...+.+..++..+..++
T Consensus 74 ~~h~~~~~~al~~gk~v~ 91 (331)
T 4hkt_A 74 DTHADLIERFARAGKAIF 91 (331)
T ss_dssp GGHHHHHHHHHHTTCEEE
T ss_pred hhHHHHHHHHHHcCCcEE
Confidence 56777778887776644
|
| >2b25_A Hypothetical protein; structural genomics, methyl transferase, SAM, structural GEN consortium, SGC, transferase; HET: SAM; 2.50A {Homo sapiens} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.26 E-value=0.0045 Score=54.41 Aligned_cols=102 Identities=21% Similarity=0.211 Sum_probs=65.6
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHHcC--------------CC--eeEecCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNKFG--------------FD--EAFNYKE 207 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~~g--------------~~--~v~~~~~ 207 (342)
....+.++++||-.|. | .|..++.+++..| .+|++++.++...+.+++.+. .. .++..
T Consensus 99 ~~l~~~~g~~VLDiG~-G-~G~~~~~la~~~g~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~ln~~~~~~~~v~~~~~-- 174 (336)
T 2b25_A 99 SMMDINPGDTVLEAGS-G-SGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDNVDFIHK-- 174 (336)
T ss_dssp HHHTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCCEEEEES--
T ss_pred HhcCCCCCCEEEEeCC-C-cCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHHHHHhhcccccccccccCCceEEEEC--
Confidence 4457899999999994 3 4888888998866 699999999987777763221 11 12211
Q ss_pred chhHHHHHHHHCCCCccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 208 EPDLNEALKRYFPEGIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 208 ~~~~~~~i~~~~~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+..+....+..+.+|+|+-.... ..+..+.++|+++|+++.+..
T Consensus 175 --d~~~~~~~~~~~~fD~V~~~~~~~~~~l~~~~~~LkpgG~lv~~~~ 220 (336)
T 2b25_A 175 --DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 220 (336)
T ss_dssp --CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred --ChHHcccccCCCCeeEEEECCCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 11111111122359988755444 468889999999999986643
|
| >3vc1_A Geranyl diphosphate 2-C-methyltransferase; rossmann fold, methyltransferase fold, SAM-dependent methyltransferase; HET: SAH GST GOL; 1.82A {Streptomyces coelicolor} PDB: 3vc2_A* 4f84_A* 4f85_A 4f86_A* | Back alignment and structure |
|---|
Probab=96.26 E-value=0.017 Score=49.97 Aligned_cols=102 Identities=11% Similarity=0.105 Sum_probs=67.9
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCCccE
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
.++++++||-.|. |.|..+..+++..|++|++++.+++..+.+++. .|...-+..... ++.+ + ....+.+|+
T Consensus 114 ~~~~~~~vLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~-~-~~~~~~fD~ 188 (312)
T 3vc1_A 114 QAGPDDTLVDAGC--GRGGSMVMAHRRFGSRVEGVTLSAAQADFGNRRARELRIDDHVRSRVC-NMLD-T-PFDKGAVTA 188 (312)
T ss_dssp CCCTTCEEEEESC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEEC-CTTS-C-CCCTTCEEE
T ss_pred cCCCCCEEEEecC--CCCHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHHHcCCCCceEEEEC-Chhc-C-CCCCCCEeE
Confidence 3789999999984 568888899988799999999999877777632 343211111111 1110 0 011237999
Q ss_pred EEeCCC-----h-hhHHHHHHhhhhCCEEEEEceec
Q 019332 226 YFENVG-----G-KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 226 vid~~g-----~-~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|+.... - ..+..+.++|+|+|+++......
T Consensus 189 V~~~~~l~~~~~~~~l~~~~~~LkpgG~l~~~~~~~ 224 (312)
T 3vc1_A 189 SWNNESTMYVDLHDLFSEHSRFLKVGGRYVTITGCW 224 (312)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHEEEEEEEEEEEEEE
T ss_pred EEECCchhhCCHHHHHHHHHHHcCCCcEEEEEEccc
Confidence 976332 2 57788999999999998776543
|
| >3lt0_A Enoyl-ACP reductase; triclosan, triclosan variant, oxidoredu P.falciparum; HET: NAD FT1; 1.96A {Plasmodium falciparum} SCOP: c.2.1.2 PDB: 1v35_A* 3lsy_A* 1uh5_A* 3lt1_A* 3lt2_A* 3lt4_A* 3am4_A* 3am3_A* 3am5_A* 2o2y_A* 2oos_A* 2ol4_A* 2op0_A* 2op1_A* 1vrw_A* 1zsn_A* 1zw1_A* 1zxb_A* 1zxl_A* 2foi_A* ... | Back alignment and structure |
|---|
Probab=96.24 E-value=0.0017 Score=56.96 Aligned_cols=35 Identities=9% Similarity=0.026 Sum_probs=30.2
Q ss_pred CCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+.++||+|+++ |+|.+.++.+...|++|+++++++
T Consensus 2 ~k~~lITGas~~~GIG~aiA~~la~~G~~Vv~~~~~~ 38 (329)
T 3lt0_A 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPP 38 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECHH
T ss_pred CcEEEEECCCCCCchHHHHHHHHHHCCCEEEEEecCc
Confidence 57899999865 999999888888999999888654
|
| >4egb_A DTDP-glucose 4,6-dehydratase; rhamnose pathway, center for structural genomics of infectio diseases, csgid, niaid; HET: NAD SUC; 3.00A {Bacillus anthracis} | Back alignment and structure |
|---|
Probab=96.22 E-value=0.01 Score=52.15 Aligned_cols=99 Identities=7% Similarity=0.046 Sum_probs=58.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChh--hHHHHHHHcC----CCe-eEecCCchhHHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKD--KIDLLKNKFG----FDE-AFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~--~~~~~~~~~g----~~~-v~~~~~~~~~~~~i~~~~~~~ 222 (342)
.+.+|||+||+|.+|..+++.+...| .+|++..++.. ..+.+. .+. +.. ..|..+...+.+.++.. +
T Consensus 23 ~~~~vlVtGatG~iG~~l~~~L~~~g~~~~v~~~~~~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~ 98 (346)
T 4egb_A 23 NAMNILVTGGAGFIGSNFVHYMLQSYETYKIINFDALTYSGNLNNVK-SIQDHPNYYFVKGEIQNGELLEHVIKER---D 98 (346)
T ss_dssp -CEEEEEETTTSHHHHHHHHHHHHHCTTEEEEEEECCCTTCCGGGGT-TTTTCTTEEEEECCTTCHHHHHHHHHHH---T
T ss_pred CCCeEEEECCccHHHHHHHHHHHhhCCCcEEEEEeccccccchhhhh-hhccCCCeEEEEcCCCCHHHHHHHHhhc---C
Confidence 35689999999999999998888888 68888876542 212222 221 111 12444431222333221 5
Q ss_pred ccEEEeCCChhh------------------HHHHHHhhhhC--CEEEEEcee
Q 019332 223 IDIYFENVGGKM------------------LDAVLLNMKIH--GRIAVCGMI 254 (342)
Q Consensus 223 ~d~vid~~g~~~------------------~~~~~~~l~~~--G~~v~~g~~ 254 (342)
+|+||++++... ...+++.++.. +++|.+++.
T Consensus 99 ~d~Vih~A~~~~~~~~~~~~~~~~~~nv~~~~~ll~a~~~~~~~~~v~~SS~ 150 (346)
T 4egb_A 99 VQVIVNFAAESHVDRSIENPIPFYDTNVIGTVTLLELVKKYPHIKLVQVSTD 150 (346)
T ss_dssp CCEEEECCCCC---------CHHHHHHTHHHHHHHHHHHHSTTSEEEEEEEG
T ss_pred CCEEEECCcccchhhhhhCHHHHHHHHHHHHHHHHHHHHhcCCCEEEEeCch
Confidence 999999988411 13344445443 478888764
|
| >3ezy_A Dehydrogenase; structural genomics, unknown function, PSI-2, protein structure initiative; 2.04A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.21 E-value=0.21 Score=43.76 Aligned_cols=86 Identities=15% Similarity=0.274 Sum_probs=58.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|.|+|. |.+|...+..++.. +++++++ ++++++.+.+.+++|...+++ ++.+.+.+ ..+|+|+.|...
T Consensus 4 rvgiIG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~~---~~~D~V~i~tp~ 74 (344)
T 3ezy_A 4 RIGVIGL-GRIGTIHAENLKMIDDAILYAISDVREDRLREMKEKLGVEKAYK-----DPHELIED---PNVDAVLVCSST 74 (344)
T ss_dssp EEEEECC-SHHHHHHHHHGGGSTTEEEEEEECSCHHHHHHHHHHHTCSEEES-----SHHHHHHC---TTCCEEEECSCG
T ss_pred EEEEEcC-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHhCCCceeC-----CHHHHhcC---CCCCEEEEcCCC
Confidence 6899996 99998766655544 6788765 456666665554788654432 44444431 259999999998
Q ss_pred -hhHHHHHHhhhhCCEEE
Q 019332 233 -KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 233 -~~~~~~~~~l~~~G~~v 249 (342)
...+.+..++..+-.++
T Consensus 75 ~~h~~~~~~al~~gk~v~ 92 (344)
T 3ezy_A 75 NTHSELVIACAKAKKHVF 92 (344)
T ss_dssp GGHHHHHHHHHHTTCEEE
T ss_pred cchHHHHHHHHhcCCeEE
Confidence 56667777887776654
|
| >3rc1_A Sugar 3-ketoreductase; sugar biosynthesis, TDP binding, NADP binding binding protein; HET: TLO NAP; 1.71A {Actinomadura kijaniata} PDB: 3rbv_A* 3rc2_A* 3rcb_A* 3rc7_A* 3rc9_A* | Back alignment and structure |
|---|
Probab=96.21 E-value=0.27 Score=43.25 Aligned_cols=86 Identities=9% Similarity=0.050 Sum_probs=58.3
Q ss_pred CEEEEecCCcHHHH-HHHHHHHHc-CCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQ-LVGQFAKLL-GCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~-~ai~la~~~-ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-+|.|+|. |.+|. ..+..++.. +++++++ ++++++.+.+.+++|+..+ . ++.+.+.+ ..+|+|+.|.
T Consensus 28 ~rigiIG~-G~~g~~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~~~~-~-----~~~~ll~~---~~~D~V~i~t 97 (350)
T 3rc1_A 28 IRVGVIGC-ADIAWRRALPALEAEPLTEVTAIASRRWDRAKRFTERFGGEPV-E-----GYPALLER---DDVDAVYVPL 97 (350)
T ss_dssp EEEEEESC-CHHHHHTHHHHHHHCTTEEEEEEEESSHHHHHHHHHHHCSEEE-E-----SHHHHHTC---TTCSEEEECC
T ss_pred eEEEEEcC-cHHHHHHHHHHHHhCCCeEEEEEEcCCHHHHHHHHHHcCCCCc-C-----CHHHHhcC---CCCCEEEECC
Confidence 47999996 99997 555555555 7788755 5566666655547887432 1 44444321 2699999999
Q ss_pred Ch-hhHHHHHHhhhhCCEEE
Q 019332 231 GG-KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 231 g~-~~~~~~~~~l~~~G~~v 249 (342)
.. ...+.+..+|+.+-.++
T Consensus 98 p~~~h~~~~~~al~aGk~Vl 117 (350)
T 3rc1_A 98 PAVLHAEWIDRALRAGKHVL 117 (350)
T ss_dssp CGGGHHHHHHHHHHTTCEEE
T ss_pred CcHHHHHHHHHHHHCCCcEE
Confidence 98 56777788887776644
|
| >3e18_A Oxidoreductase; dehydrogenase, NAD-binding, structural genom protein structure initiative, PSI, NEW YORK structural GENO research consortium; HET: NAD; 1.95A {Listeria innocua} | Back alignment and structure |
|---|
Probab=96.18 E-value=0.14 Score=45.32 Aligned_cols=86 Identities=14% Similarity=0.147 Sum_probs=59.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc-CCEEEEEe-CChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSA-GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
-+|.|+|. |.+|...+..++.. ++++++++ +++++.+.++ ++|+. + |. ++.+.+.+ ..+|+|+.|..
T Consensus 6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~a~-~~g~~-~--~~---~~~~ll~~---~~~D~V~i~tp 74 (359)
T 3e18_A 6 YQLVIVGY-GGMGSYHVTLASAADNLEVHGVFDILAEKREAAA-QKGLK-I--YE---SYEAVLAD---EKVDAVLIATP 74 (359)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTSTTEEEEEEECSSHHHHHHHH-TTTCC-B--CS---CHHHHHHC---TTCCEEEECSC
T ss_pred CcEEEECc-CHHHHHHHHHHHhCCCcEEEEEEcCCHHHHHHHH-hcCCc-e--eC---CHHHHhcC---CCCCEEEEcCC
Confidence 47899996 99998777776655 67888664 5666666665 67763 2 22 44444432 25999999999
Q ss_pred h-hhHHHHHHhhhhCCEEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v~ 250 (342)
. ...+.+..+|+.+-.+++
T Consensus 75 ~~~h~~~~~~al~aGkhVl~ 94 (359)
T 3e18_A 75 NDSHKELAISALEAGKHVVC 94 (359)
T ss_dssp GGGHHHHHHHHHHTTCEEEE
T ss_pred cHHHHHHHHHHHHCCCCEEe
Confidence 8 677788888887766553
|
| >2gcg_A Glyoxylate reductase/hydroxypyruvate reductase; NAD(P) rossmann fold, formate/glycerate dehydrogenase substr binding domain, oxidoreductase; HET: NDP; 2.20A {Homo sapiens} PDB: 2wwr_A 2h1s_A 2q50_A | Back alignment and structure |
|---|
Probab=96.17 E-value=0.022 Score=49.86 Aligned_cols=88 Identities=15% Similarity=0.095 Sum_probs=62.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++..|.+|++..++.++.+.+. ++|.... ++.+.+++ .|+|+.++.
T Consensus 154 ~g~~vgIIG~-G~iG~~iA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~e~l~~-----aDvVi~~vp 219 (330)
T 2gcg_A 154 TQSTVGIIGL-GRIGQAIARRLKPFGVQRFLYTGRQPRPEEAA-EFQAEFV-------STPELAAQ-----SDFIVVACS 219 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCCEEEEESSSCCHHHHH-TTTCEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred CCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcchhHHH-hcCceeC-------CHHHHHhh-----CCEEEEeCC
Confidence 4679999997 99999999999999999999998776555555 5664321 22333332 788888876
Q ss_pred h-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 232 G-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
. . .+ ...++.++++..++.++.
T Consensus 220 ~~~~t~~~i~~~~~~~mk~gailIn~sr 247 (330)
T 2gcg_A 220 LTPATEGLCNKDFFQKMKETAVFINISR 247 (330)
T ss_dssp CCTTTTTCBSHHHHHHSCTTCEEEECSC
T ss_pred CChHHHHhhCHHHHhcCCCCcEEEECCC
Confidence 4 1 12 356677888877777654
|
| >4e5n_A Thermostable phosphite dehydrogenase; D-2-hydroxyacid dehydrogenase, oxidoreductase; HET: NAD; 1.70A {Pseudomonas stutzeri} PDB: 4e5k_A* 4ebf_A* 4e5p_A* 4e5m_A* | Back alignment and structure |
|---|
Probab=96.16 E-value=0.011 Score=51.76 Aligned_cols=88 Identities=10% Similarity=0.047 Sum_probs=62.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++.+|.+|++..++..+.+... ++|+... ++.+.+++ .|+|+-+..
T Consensus 144 ~g~tvGIIG~-G~IG~~vA~~l~~~G~~V~~~d~~~~~~~~~~-~~g~~~~-------~l~ell~~-----aDvV~l~~P 209 (330)
T 4e5n_A 144 DNATVGFLGM-GAIGLAMADRLQGWGATLQYHEAKALDTQTEQ-RLGLRQV-------ACSELFAS-----SDFILLALP 209 (330)
T ss_dssp TTCEEEEECC-SHHHHHHHHHTTTSCCEEEEECSSCCCHHHHH-HHTEEEC-------CHHHHHHH-----CSEEEECCC
T ss_pred CCCEEEEEee-CHHHHHHHHHHHHCCCEEEEECCCCCcHhHHH-hcCceeC-------CHHHHHhh-----CCEEEEcCC
Confidence 5789999996 99999999999999999999998875545555 6665221 33333433 678877765
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
. + .-...+..|+++..++.++.
T Consensus 210 ~t~~t~~li~~~~l~~mk~gailIN~ar 237 (330)
T 4e5n_A 210 LNADTLHLVNAELLALVRPGALLVNPCR 237 (330)
T ss_dssp CSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCHHHHHHhCHHHHhhCCCCcEEEECCC
Confidence 3 1 12356677777777777764
|
| >1yb2_A Hypothetical protein TA0852; structural genomics, methyltransferase, thermoplasma acidoph midwest center for structural genomics, MCSG; 2.01A {Thermoplasma acidophilum} SCOP: c.66.1.13 | Back alignment and structure |
|---|
Probab=96.16 E-value=0.014 Score=49.61 Aligned_cols=101 Identities=9% Similarity=0.083 Sum_probs=68.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHc----CCCeeEecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKF----GFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~----g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
....++++++||-.|+ |.|..+..+++.. +.+|++++.+++..+.+++.+ |.+.+ ..... ++.+ ...
T Consensus 104 ~~~~~~~~~~VLD~G~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~g~~~v-~~~~~-d~~~---~~~ 176 (275)
T 1yb2_A 104 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGNV-RTSRS-DIAD---FIS 176 (275)
T ss_dssp --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTTE-EEECS-CTTT---CCC
T ss_pred HHcCCCCcCEEEEecC--CCCHHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhcCCCCcE-EEEEC-chhc---cCc
Confidence 4467889999999985 4688888888873 679999999998887776433 53321 11111 2211 111
Q ss_pred CCCccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PEGIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+|+|+-.... ..+..+.+.|+++|+++....
T Consensus 177 ~~~fD~Vi~~~~~~~~~l~~~~~~LkpgG~l~i~~~ 212 (275)
T 1yb2_A 177 DQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 212 (275)
T ss_dssp SCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred CCCccEEEEcCcCHHHHHHHHHHHcCCCCEEEEEeC
Confidence 2369998865544 578899999999999887643
|
| >3p2o_A Bifunctional protein fold; structural genomics, center for structural genomics of infec diseases, csgid, alpha-beta-alpha sandwich; HET: NAD; 2.23A {Campylobacter jejuni subsp} | Back alignment and structure |
|---|
Probab=96.16 E-value=0.012 Score=49.79 Aligned_cols=91 Identities=18% Similarity=0.051 Sum_probs=62.6
Q ss_pred hhHHHh---hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHH
Q 019332 138 MTAYAG---FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEA 214 (342)
Q Consensus 138 ~ta~~a---l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~ 214 (342)
+|++.+ |.+...--.|.+++|.|+++.+|..+++++...|++|++..+... ++.+.
T Consensus 142 cTp~gv~~lL~~~~i~l~Gk~vvVvGrs~iVG~p~A~lL~~~gAtVtv~h~~t~---------------------~L~~~ 200 (285)
T 3p2o_A 142 CTPLGVMKLLKAYEIDLEGKDAVIIGASNIVGRPMATMLLNAGATVSVCHIKTK---------------------DLSLY 200 (285)
T ss_dssp HHHHHHHHHHHHTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHH
T ss_pred CCHHHHHHHHHHhCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHH
Confidence 455444 433333358899999998777999999999999999887764321 33333
Q ss_pred HHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceec
Q 019332 215 LKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 215 i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
++ .+|+++.++|...+ ---+.++++..++.+|...
T Consensus 201 ~~-----~ADIVI~Avg~p~~-I~~~~vk~GavVIDVgi~~ 235 (285)
T 3p2o_A 201 TR-----QADLIIVAAGCVNL-LRSDMVKEGVIVVDVGINR 235 (285)
T ss_dssp HT-----TCSEEEECSSCTTC-BCGGGSCTTEEEEECCCEE
T ss_pred hh-----cCCEEEECCCCCCc-CCHHHcCCCeEEEEeccCc
Confidence 33 28999999997422 1235678888888988754
|
| >4df3_A Fibrillarin-like rRNA/TRNA 2'-O-methyltransferase; NADP rossmann superfamily, S-adenosyl-L-M (SAM) binding, nucleolus; HET: SAM; 1.73A {Aeropyrum pernix} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.015 Score=47.92 Aligned_cols=100 Identities=14% Similarity=0.143 Sum_probs=65.6
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCC-C--eeEecCCchhHHHHHHHHCCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGF-D--EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~-~--~v~~~~~~~~~~~~i~~~~~~ 221 (342)
...++||++||=.|+ |.|..+..+|+..|- +|++++.+++-.+.+++.... . ..+..... +. +.. ....+
T Consensus 72 ~l~ikpG~~VldlG~--G~G~~~~~la~~VG~~G~V~avD~s~~~~~~l~~~a~~~~ni~~V~~d~~-~p-~~~-~~~~~ 146 (233)
T 4df3_A 72 ELPVKEGDRILYLGI--ASGTTASHMSDIIGPRGRIYGVEFAPRVMRDLLTVVRDRRNIFPILGDAR-FP-EKY-RHLVE 146 (233)
T ss_dssp CCCCCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEECCHHHHHHHHHHSTTCTTEEEEESCTT-CG-GGG-TTTCC
T ss_pred hcCCCCCCEEEEecC--cCCHHHHHHHHHhCCCceEEEEeCCHHHHHHHHHhhHhhcCeeEEEEecc-Cc-ccc-ccccc
Confidence 357899999999995 668899999998875 899999999887777633221 1 11211111 10 011 11123
Q ss_pred CccEEEeCCCh-----hhHHHHHHhhhhCCEEEEE
Q 019332 222 GIDIYFENVGG-----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 222 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~ 251 (342)
.+|+||....- ..+..+.+.|+|+|+++..
T Consensus 147 ~vDvVf~d~~~~~~~~~~l~~~~r~LKpGG~lvI~ 181 (233)
T 4df3_A 147 GVDGLYADVAQPEQAAIVVRNARFFLRDGGYMLMA 181 (233)
T ss_dssp CEEEEEECCCCTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred eEEEEEEeccCChhHHHHHHHHHHhccCCCEEEEE
Confidence 58988754442 2466778899999998864
|
| >3l4b_C TRKA K+ channel protien TM1088B; potassium channel, ring-gating complex, structural GEN PSI-2-2, protein structure initiative; HET: AMP; 3.45A {Thermotoga maritima} | Back alignment and structure |
|---|
Probab=96.15 E-value=0.057 Score=43.99 Aligned_cols=78 Identities=10% Similarity=-0.029 Sum_probs=56.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|+|.|+ |.+|..+++.+...|.+|+++++++++.+.+.+.++.. ++..+. .-.+.+++..-.++|+++-+.+.+.
T Consensus 2 ~iiIiG~-G~~G~~la~~L~~~g~~v~vid~~~~~~~~l~~~~~~~-~i~gd~--~~~~~l~~a~i~~ad~vi~~~~~d~ 77 (218)
T 3l4b_C 2 KVIIIGG-ETTAYYLARSMLSRKYGVVIINKDRELCEEFAKKLKAT-IIHGDG--SHKEILRDAEVSKNDVVVILTPRDE 77 (218)
T ss_dssp CEEEECC-HHHHHHHHHHHHHTTCCEEEEESCHHHHHHHHHHSSSE-EEESCT--TSHHHHHHHTCCTTCEEEECCSCHH
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCeEEEEECCHHHHHHHHHHcCCe-EEEcCC--CCHHHHHhcCcccCCEEEEecCCcH
Confidence 4889997 99999999999999999999999999888766356653 332222 1233455543347999999999854
Q ss_pred HH
Q 019332 235 LD 236 (342)
Q Consensus 235 ~~ 236 (342)
.+
T Consensus 78 ~n 79 (218)
T 3l4b_C 78 VN 79 (218)
T ss_dssp HH
T ss_pred HH
Confidence 33
|
| >1nkv_A Hypothetical protein YJHP; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 2.90A {Escherichia coli} SCOP: c.66.1.21 | Back alignment and structure |
|---|
Probab=96.15 E-value=0.0048 Score=51.71 Aligned_cols=99 Identities=15% Similarity=0.102 Sum_probs=67.0
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC---eeEecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD---EAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~ 219 (342)
....+.++.+||-.|. |.|..+..+++..|++|++++.+++-.+.+++. .|.. .++..+-. ++ ..
T Consensus 30 ~~~~~~~~~~VLDiGc--G~G~~~~~la~~~~~~v~gvD~s~~~l~~a~~~~~~~~~~~~v~~~~~d~~-~~------~~ 100 (256)
T 1nkv_A 30 RVLRMKPGTRILDLGS--GSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHNDAA-GY------VA 100 (256)
T ss_dssp HHTCCCTTCEEEEETC--TTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEESCCT-TC------CC
T ss_pred HhcCCCCCCEEEEECC--CCCHHHHHHHHhcCCeEEEEeCCHHHHHHHHHHHHhcCCCcceEEEECChH-hC------Cc
Confidence 4467889999999984 458888999998899999999999877766532 3432 12221111 11 01
Q ss_pred CCCccEEEeCCC-----h--hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PEGIDIYFENVG-----G--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.+|+|+-... . ..+..+.++|+|+|+++....
T Consensus 101 ~~~fD~V~~~~~~~~~~~~~~~l~~~~r~LkpgG~l~~~~~ 141 (256)
T 1nkv_A 101 NEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGEP 141 (256)
T ss_dssp SSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEEE
T ss_pred CCCCCEEEECCChHhcCCHHHHHHHHHHHcCCCeEEEEecC
Confidence 236999985221 1 357788889999999887643
|
| >2ph5_A Homospermidine synthase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative; HET: NAD; 2.50A {Legionella pneumophila subsp} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.018 Score=52.32 Aligned_cols=102 Identities=16% Similarity=0.119 Sum_probs=69.9
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHH-cCC---EEEEEeCChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKL-LGC---YVVGSAGSKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~-~ga---~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~ 222 (342)
.++....+|+|+|+ |+||..++.++.. .+. +|++++..+.+.+... ..|.... ..-+.. +..+.+..+..++
T Consensus 8 ~~~~~~~rVlIIGa-GgVG~~va~lla~~~dv~~~~I~vaD~~~~~~~~~~-~~g~~~~~~~Vdad-nv~~~l~aLl~~~ 84 (480)
T 2ph5_A 8 KKILFKNRFVILGF-GCVGQALMPLIFEKFDIKPSQVTIIAAEGTKVDVAQ-QYGVSFKLQQITPQ-NYLEVIGSTLEEN 84 (480)
T ss_dssp TCBCCCSCEEEECC-SHHHHHHHHHHHHHBCCCGGGEEEEESSCCSCCHHH-HHTCEEEECCCCTT-THHHHTGGGCCTT
T ss_pred ceecCCCCEEEECc-CHHHHHHHHHHHhCCCCceeEEEEeccchhhhhHHh-hcCCceeEEeccch-hHHHHHHHHhcCC
Confidence 34556678999996 9999998877754 454 6888877666545555 6675321 222233 5555566565554
Q ss_pred ccEEEeCCCh-hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFENVGG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
|+|+|++-. ..+..+-.|++.+-.++.+..
T Consensus 85 -DvVIN~s~~~~~l~Im~acleaGv~YlDTa~ 115 (480)
T 2ph5_A 85 -DFLIDVSIGISSLALIILCNQKGALYINAAT 115 (480)
T ss_dssp -CEEEECCSSSCHHHHHHHHHHHTCEEEESSC
T ss_pred -CEEEECCccccCHHHHHHHHHcCCCEEECCC
Confidence 999997766 566777778888989998764
|
| >3db2_A Putative NADPH-dependent oxidoreductase; two domain protein, rossman fold, putative dehydrogenase, ST genomics; 1.70A {Desulfitobacterium hafniense dcb-2} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.17 Score=44.59 Aligned_cols=87 Identities=14% Similarity=0.125 Sum_probs=59.9
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc-CCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL-GCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
-+|.|+|. |.+|...+...+.. +++++++ ++++++.+.+.+++|+.. +. ++.+.+.+ ..+|+|+.|..
T Consensus 6 ~~vgiiG~-G~~g~~~~~~l~~~~~~~lvav~d~~~~~~~~~~~~~g~~~---~~---~~~~~l~~---~~~D~V~i~tp 75 (354)
T 3db2_A 6 VGVAAIGL-GRWAYVMADAYTKSEKLKLVTCYSRTEDKREKFGKRYNCAG---DA---TMEALLAR---EDVEMVIITVP 75 (354)
T ss_dssp EEEEEECC-SHHHHHHHHHHTTCSSEEEEEEECSSHHHHHHHHHHHTCCC---CS---SHHHHHHC---SSCCEEEECSC
T ss_pred ceEEEEcc-CHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCCCC---cC---CHHHHhcC---CCCCEEEEeCC
Confidence 47999996 99998777766655 7787755 456666665554778643 22 44444431 26999999999
Q ss_pred h-hhHHHHHHhhhhCCEEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v~ 250 (342)
. ...+.+..++..+-.+++
T Consensus 76 ~~~h~~~~~~al~~gk~vl~ 95 (354)
T 3db2_A 76 NDKHAEVIEQCARSGKHIYV 95 (354)
T ss_dssp TTSHHHHHHHHHHTTCEEEE
T ss_pred hHHHHHHHHHHHHcCCEEEE
Confidence 8 567777888887766543
|
| >4f6c_A AUSA reductase domain protein; thioester reductase, oxidoreductase; 2.81A {Staphylococcus aureus} | Back alignment and structure |
|---|
Probab=96.14 E-value=0.031 Score=50.72 Aligned_cols=38 Identities=8% Similarity=0.071 Sum_probs=33.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.++.+|||+||+|.+|..+++.+...|++|++++++++
T Consensus 67 ~~~~~vlVTGatG~iG~~l~~~L~~~g~~V~~~~R~~~ 104 (427)
T 4f6c_A 67 RPLGNTLLTGATGFLGAYLIEALQGYSHRIYCFIRADN 104 (427)
T ss_dssp CCCEEEEEECTTSHHHHHHHHHHTTTEEEEEEEEECSS
T ss_pred CCCCEEEEecCCcHHHHHHHHHHHcCCCEEEEEECCCC
Confidence 45669999999999999988888777899999998876
|
| >3e9m_A Oxidoreductase, GFO/IDH/MOCA family; GFO/LDH/MOCA, PSI-II, dimeric dihydodiol dehydrogenase, structural genomics; 2.70A {Enterococcus faecalis} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.15 Score=44.43 Aligned_cols=88 Identities=15% Similarity=0.060 Sum_probs=59.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc-CCEEEEEe-CChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSA-GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
-+|.|+|. |.+|...+..++.. ++++++++ +++++.+.+.+++|...++ . ++.+.+.+ ..+|+|+.|+.
T Consensus 6 ~~igiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~~~~~~~~~~~--~---~~~~ll~~---~~~D~V~i~tp 76 (330)
T 3e9m_A 6 IRYGIMST-AQIVPRFVAGLRESAQAEVRGIASRRLENAQKMAKELAIPVAY--G---SYEELCKD---ETIDIIYIPTY 76 (330)
T ss_dssp EEEEECSC-CTTHHHHHHHHHHSSSEEEEEEBCSSSHHHHHHHHHTTCCCCB--S---SHHHHHHC---TTCSEEEECCC
T ss_pred EEEEEECc-hHHHHHHHHHHHhCCCcEEEEEEeCCHHHHHHHHHHcCCCcee--C---CHHHHhcC---CCCCEEEEcCC
Confidence 47899996 99998777776654 67888665 4556655555477764332 1 44444431 25999999999
Q ss_pred h-hhHHHHHHhhhhCCEEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v~ 250 (342)
. ...+.+..+++.+-.+++
T Consensus 77 ~~~h~~~~~~al~~gk~vl~ 96 (330)
T 3e9m_A 77 NQGHYSAAKLALSQGKPVLL 96 (330)
T ss_dssp GGGHHHHHHHHHHTTCCEEE
T ss_pred CHHHHHHHHHHHHCCCeEEE
Confidence 8 567777788887766543
|
| >4a5o_A Bifunctional protein fold; oxidoreductase, hydrolase; 2.20A {Pseudomonas aeruginosa PAO1} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.014 Score=49.26 Aligned_cols=78 Identities=22% Similarity=0.166 Sum_probs=58.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+++|.|.++-+|..+++++...|++|++..+... ++.+.+++ +|+++.++
T Consensus 159 l~Gk~vvVvGrs~iVG~plA~lL~~~gAtVtv~hs~T~---------------------~L~~~~~~-----ADIVI~Av 212 (286)
T 4a5o_A 159 LYGMDAVVVGASNIVGRPMALELLLGGCTVTVTHRFTR---------------------DLADHVSR-----ADLVVVAA 212 (286)
T ss_dssp CTTCEEEEECTTSTTHHHHHHHHHHTTCEEEEECTTCS---------------------CHHHHHHT-----CSEEEECC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCCc---------------------CHHHHhcc-----CCEEEECC
Confidence 57899999998777999999999999999887754211 33444443 79999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEceec
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|...+ ---+.++++..++.+|...
T Consensus 213 g~p~~-I~~~~vk~GavVIDvgi~~ 236 (286)
T 4a5o_A 213 GKPGL-VKGEWIKEGAIVIDVGINR 236 (286)
T ss_dssp CCTTC-BCGGGSCTTCEEEECCSCS
T ss_pred CCCCC-CCHHHcCCCeEEEEecccc
Confidence 97422 1225678898999998643
|
| >3gjy_A Spermidine synthase; APC62791, structural genomics, PSI-2, protein structure initiative; HET: MSE; 1.47A {Corynebacterium glutamicum atcc 13032} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.02 Score=49.61 Aligned_cols=95 Identities=9% Similarity=0.106 Sum_probs=64.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccEEEeC-C
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFEN-V 230 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid~-~ 230 (342)
+||++| +|.|..+..+++.+ +.+|+++..+++-.+.+++.++.. .-+..... |..+.+++...+.||+||-- .
T Consensus 92 rVLdIG--~G~G~la~~la~~~p~~~v~~VEidp~vi~~Ar~~~~~~~~~rv~v~~~-Da~~~l~~~~~~~fDvIi~D~~ 168 (317)
T 3gjy_A 92 RITHLG--GGACTMARYFADVYPQSRNTVVELDAELARLSREWFDIPRAPRVKIRVD-DARMVAESFTPASRDVIIRDVF 168 (317)
T ss_dssp EEEEES--CGGGHHHHHHHHHSTTCEEEEEESCHHHHHHHHHHSCCCCTTTEEEEES-CHHHHHHTCCTTCEEEEEECCS
T ss_pred EEEEEE--CCcCHHHHHHHHHCCCcEEEEEECCHHHHHHHHHhccccCCCceEEEEC-cHHHHHhhccCCCCCEEEECCC
Confidence 899999 56788888888854 779999999998888888556531 11122122 44444544333479988642 2
Q ss_pred C----------hhhHHHHHHhhhhCCEEEEEc
Q 019332 231 G----------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 231 g----------~~~~~~~~~~l~~~G~~v~~g 252 (342)
. .+.+..+.++|+++|.++...
T Consensus 169 ~~~~~~~~L~t~efl~~~~r~LkpgGvlv~~~ 200 (317)
T 3gjy_A 169 AGAITPQNFTTVEFFEHCHRGLAPGGLYVANC 200 (317)
T ss_dssp TTSCCCGGGSBHHHHHHHHHHEEEEEEEEEEE
T ss_pred CccccchhhhHHHHHHHHHHhcCCCcEEEEEe
Confidence 1 145788999999999987543
|
| >1mjf_A Spermidine synthase; spermidine synthetase, structural genomics, PSI, protein structure initiative; 1.80A {Pyrococcus furiosus} SCOP: c.66.1.17 PDB: 2e5w_A* 2zsu_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.01 Score=50.70 Aligned_cols=95 Identities=17% Similarity=0.153 Sum_probs=63.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc----CC--------CeeEecCCchhHHHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF----GF--------DEAFNYKEEPDLNEALKR 217 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~----g~--------~~v~~~~~~~~~~~~i~~ 217 (342)
.++.+||..|+ |.|..+..+++. +. +|+++..+++-.+.+++.+ +. +.-+..... +..+.+..
T Consensus 74 ~~~~~VLdiG~--G~G~~~~~l~~~-~~~~v~~vDid~~~i~~ar~~~~~~~~l~~~~~~~~~~~v~~~~~-D~~~~l~~ 149 (281)
T 1mjf_A 74 PKPKRVLVIGG--GDGGTVREVLQH-DVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN 149 (281)
T ss_dssp SCCCEEEEEEC--TTSHHHHHHTTS-CCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH
T ss_pred CCCCeEEEEcC--CcCHHHHHHHhC-CCCEEEEEECCHHHHHHHHHHHhhccccccccccCCCCcEEEEEC-chHHHhcc
Confidence 35679999994 557777888877 65 9999999998888887545 21 111222122 43444444
Q ss_pred HCCCCccEEEe-CCC----------hhhHHHHHHhhhhCCEEEEE
Q 019332 218 YFPEGIDIYFE-NVG----------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 218 ~~~~~~d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~ 251 (342)
.+.+|+|+- ... .+.+..+.+.|+++|.++..
T Consensus 150 --~~~fD~Ii~d~~~~~~~~~~l~~~~~l~~~~~~L~pgG~lv~~ 192 (281)
T 1mjf_A 150 --NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 192 (281)
T ss_dssp --CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred --cCCeeEEEECCCCCCCcchhhhHHHHHHHHHHhcCCCcEEEEE
Confidence 447998764 321 24578889999999998864
|
| >1n2s_A DTDP-4-, DTDP-glucose oxidoreductase; rossman-fold, sugar-nucleotide-binding domain; HET: NAD; 2.00A {Salmonella enterica subsp} SCOP: c.2.1.2 PDB: 1kc1_A* 1kc3_A* 1kbz_A* | Back alignment and structure |
|---|
Probab=96.13 E-value=0.03 Score=47.88 Aligned_cols=85 Identities=7% Similarity=0.075 Sum_probs=55.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|||+||+|.+|..+++.+. .|.+|++++++.. - ...|..+...+.+.++.. ++|+||++++...
T Consensus 2 ~ilVtGatG~iG~~l~~~L~-~g~~V~~~~r~~~-------~----~~~D~~d~~~~~~~~~~~---~~d~vih~a~~~~ 66 (299)
T 1n2s_A 2 NILLFGKTGQVGWELQRSLA-PVGNLIALDVHSK-------E----FCGDFSNPKGVAETVRKL---RPDVIVNAAAHTA 66 (299)
T ss_dssp EEEEECTTSHHHHHHHHHTT-TTSEEEEECTTCS-------S----SCCCTTCHHHHHHHHHHH---CCSEEEECCCCCC
T ss_pred eEEEECCCCHHHHHHHHHhh-cCCeEEEeccccc-------c----ccccCCCHHHHHHHHHhc---CCCEEEECcccCC
Confidence 69999999999999988888 7999999997652 1 112333331233333321 5899999987411
Q ss_pred ------------------HHHHHHhhhh-CCEEEEEcee
Q 019332 235 ------------------LDAVLLNMKI-HGRIAVCGMI 254 (342)
Q Consensus 235 ------------------~~~~~~~l~~-~G~~v~~g~~ 254 (342)
...+++.++. +.+++.+++.
T Consensus 67 ~~~~~~~~~~~~~~n~~~~~~l~~a~~~~~~~~v~~SS~ 105 (299)
T 1n2s_A 67 VDKAESEPELAQLLNATSVEAIAKAANETGAWVVHYSTD 105 (299)
T ss_dssp HHHHTTCHHHHHHHHTHHHHHHHHHHTTTTCEEEEEEEG
T ss_pred HhhhhcCHHHHHHHHHHHHHHHHHHHHHcCCcEEEEecc
Confidence 1234444444 4588887764
|
| >4a26_A Putative C-1-tetrahydrofolate synthase, cytoplasm; oxidoreductase, hydrolase, leishmaniasis; 2.70A {Leishmania major} | Back alignment and structure |
|---|
Probab=96.13 E-value=0.017 Score=49.30 Aligned_cols=87 Identities=14% Similarity=0.081 Sum_probs=60.8
Q ss_pred HHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH--HHHHHH
Q 019332 141 YAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN--EALKRY 218 (342)
Q Consensus 141 ~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~--~~i~~~ 218 (342)
...|.+..---.|.+++|.|.++-+|..+++++...|++|++..+... ++. +.+++
T Consensus 153 ~~lL~~~~i~l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~~~~T~---------------------~l~l~~~~~~- 210 (300)
T 4a26_A 153 IVLLKRCGIEMAGKRAVVLGRSNIVGAPVAALLMKENATVTIVHSGTS---------------------TEDMIDYLRT- 210 (300)
T ss_dssp HHHHHHHTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTSC---------------------HHHHHHHHHT-
T ss_pred HHHHHHcCCCCCCCEEEEECCCchHHHHHHHHHHHCCCeEEEEeCCCC---------------------Cchhhhhhcc-
Confidence 333433333458899999998667999999999999999888765322 222 23332
Q ss_pred CCCCccEEEeCCChh-hHHHHHHhhhhCCEEEEEceec
Q 019332 219 FPEGIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 219 ~~~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|+++.++|.. .+. -+.++++..++.+|...
T Consensus 211 ----ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 242 (300)
T 4a26_A 211 ----ADIVIAAMGQPGYVK--GEWIKEGAAVVDVGTTP 242 (300)
T ss_dssp ----CSEEEECSCCTTCBC--GGGSCTTCEEEECCCEE
T ss_pred ----CCEEEECCCCCCCCc--HHhcCCCcEEEEEeccC
Confidence 79999999974 322 24578888999998743
|
| >1i24_A Sulfolipid biosynthesis protein SQD1; SDR, short-chain dehydrogenase/reductase, rossmann fold, BIO protein; HET: NAD UPG; 1.20A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 1i2c_A* 1i2b_A* 1qrr_A* | Back alignment and structure |
|---|
Probab=96.12 E-value=0.019 Score=51.57 Aligned_cols=39 Identities=13% Similarity=0.044 Sum_probs=31.4
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
-+.+.+|||+||+|.+|..++..+...|++|+++++...
T Consensus 8 ~~~~~~vlVTG~tGfIG~~l~~~L~~~G~~V~~~~r~~~ 46 (404)
T 1i24_A 8 HHHGSRVMVIGGDGYCGWATALHLSKKNYEVCIVDNLVR 46 (404)
T ss_dssp ----CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCHH
T ss_pred ccCCCeEEEeCCCcHHHHHHHHHHHhCCCeEEEEEecCc
Confidence 467889999999999999999888888999999987643
|
| >3l07_A Bifunctional protein fold; structural genomics, IDP01849, methylenetetrahydrofolate dehydrogenase; 1.88A {Francisella tularensis} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=49.24 Aligned_cols=78 Identities=21% Similarity=0.170 Sum_probs=56.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+++|.|+++-+|..+++++...|++|++..+... ++.+.++ .+|+++.++
T Consensus 159 l~Gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t~---------------------~L~~~~~-----~ADIVI~Av 212 (285)
T 3l07_A 159 TEGAYAVVVGASNVVGKPVSQLLLNAKATVTTCHRFTT---------------------DLKSHTT-----KADILIVAV 212 (285)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCS---------------------SHHHHHT-----TCSEEEECC
T ss_pred CCCCEEEEECCCchhHHHHHHHHHHCCCeEEEEeCCch---------------------hHHHhcc-----cCCEEEECC
Confidence 57899999998666999999999999999877653211 3333333 289999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEceec
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|...+ ---+.++++..++.+|...
T Consensus 213 g~p~~-I~~~~vk~GavVIDvgi~~ 236 (285)
T 3l07_A 213 GKPNF-ITADMVKEGAVVIDVGINH 236 (285)
T ss_dssp CCTTC-BCGGGSCTTCEEEECCCEE
T ss_pred CCCCC-CCHHHcCCCcEEEEecccC
Confidence 97422 1225678888888888643
|
| >2gk4_A Conserved hypothetical protein; alpha-beta-alpha sandwich, flavoprotein, structural genomics protein structure initiative; 1.83A {Streptococcus pneumoniae} | Back alignment and structure |
|---|
Probab=96.11 E-value=0.027 Score=46.28 Aligned_cols=77 Identities=8% Similarity=0.103 Sum_probs=52.3
Q ss_pred CCCEEEEecC----------------CcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHH
Q 019332 152 QGECVFISAA----------------SGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEAL 215 (342)
Q Consensus 152 ~~~~vlI~ga----------------~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i 215 (342)
.|.+|||+|| +|.+|.+.++.+...|++|+.+.+..+-.... ..+. .+++.....++.+.+
T Consensus 2 ~gk~vlVTgG~T~E~IDpVR~ItN~SSG~mG~aiA~~~~~~Ga~V~lv~~~~~~~~~~--~~~~-~~~~v~s~~em~~~v 78 (232)
T 2gk4_A 2 NAMKILVTSGGTSEAIDSVRSITNHSTGHLGKIITETLLSAGYEVCLITTKRALKPEP--HPNL-SIREITNTKDLLIEM 78 (232)
T ss_dssp -CCEEEEECSBCEEESSSSEEEEECCCCHHHHHHHHHHHHTTCEEEEEECTTSCCCCC--CTTE-EEEECCSHHHHHHHH
T ss_pred CCCEEEEeCCCcccccCceeeccCCCCCHHHHHHHHHHHHCCCEEEEEeCCccccccC--CCCe-EEEEHhHHHHHHHHH
Confidence 5789999999 78899999999999999999999764310000 0122 344544332455555
Q ss_pred HHHCCCCccEEEeCCCh
Q 019332 216 KRYFPEGIDIYFENVGG 232 (342)
Q Consensus 216 ~~~~~~~~d~vid~~g~ 232 (342)
.+.. +++|+++.+++-
T Consensus 79 ~~~~-~~~Dili~aAAv 94 (232)
T 2gk4_A 79 QERV-QDYQVLIHSMAV 94 (232)
T ss_dssp HHHG-GGCSEEEECSBC
T ss_pred HHhc-CCCCEEEEcCcc
Confidence 5544 359999999884
|
| >3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.023 Score=63.21 Aligned_cols=82 Identities=13% Similarity=0.063 Sum_probs=57.5
Q ss_pred CCCCEEEEecCCcH-HHHHHHHHHHHcCCEEEEEeCChhh-----HHHHHHHcCCC--e----eEecCCchhHHHHHHHH
Q 019332 151 KQGECVFISAASGA-VGQLVGQFAKLLGCYVVGSAGSKDK-----IDLLKNKFGFD--E----AFNYKEEPDLNEALKRY 218 (342)
Q Consensus 151 ~~~~~vlI~ga~g~-vG~~ai~la~~~ga~Vi~~~~s~~~-----~~~~~~~~g~~--~----v~~~~~~~~~~~~i~~~ 218 (342)
-.|.++||+||++| ||.+.++.+...|++|++++++.++ .+.+.++++.. . ..|-.+..+....+.+.
T Consensus 2134 l~gKvaLVTGAs~GsIG~AiA~~La~~GA~Vvi~~r~~~~~~~~~~~~l~~~l~~~G~~~~~v~~Dvtd~~~v~~lv~~i 2213 (3089)
T 3zen_D 2134 XXDEVAVVTGASKGSIAASVVGQLLDGGATVIATTSRLDDDRLAFYKQLYRDHARFDATLWVVPANMASYSDIDKLVEWV 2213 (3089)
T ss_dssp CCCCEEEEESCCTTSHHHHHHHHHHHTTCEEEEEESCCSHHHHHHHHHHHHHHCCTTCEEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCEEEEeCCChhHHHHHHHHHHHHCCCEEEEEeCChhhhhhHHHHHHHHHHhhcCCeEEEEEecCCCHHHHHHHHHHH
Confidence 46889999999999 9999999999999999999987765 34333244431 1 13444442444444444
Q ss_pred CC------CCccEEEeCCCh
Q 019332 219 FP------EGIDIYFENVGG 232 (342)
Q Consensus 219 ~~------~~~d~vid~~g~ 232 (342)
.. |++|++++++|.
T Consensus 2214 ~~~~~~~fG~IDILVNNAGi 2233 (3089)
T 3zen_D 2214 GTEQTESLGPQSIHLKDAQT 2233 (3089)
T ss_dssp TSCCEEEESSSEEEECCCCC
T ss_pred HhhhhhhcCCCCEEEECCCc
Confidence 43 479999999884
|
| >1p9l_A Dihydrodipicolinate reductase; oxidoreductase, lysine biosynthesis, NADH binding specificity, TB structural genomics consortium; HET: NAD PDC PG4; 2.30A {Mycobacterium tuberculosis} SCOP: c.2.1.3 d.81.1.3 PDB: 1c3v_A* 1yl5_A 1yl7_A* 1yl6_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.07 Score=44.36 Aligned_cols=77 Identities=16% Similarity=0.147 Sum_probs=52.5
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|+|.|++|.+|...++.+... +.+++++....+..+.+. ..+++-++|+..+....+.+......+.++|+-+.|-
T Consensus 2 kV~V~Ga~G~mG~~i~~~~~~~~~~elva~~d~~~dl~~~~-~~~~DvvIDfT~p~a~~~~~~~a~~~g~~~VigTTG~ 79 (245)
T 1p9l_A 2 RVGVLGAKGKVGTTMVRAVAAADDLTLSAELDAGDPLSLLT-DGNTEVVIDFTHPDVVMGNLEFLIDNGIHAVVGTTGF 79 (245)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTCEEEEEECTTCCTHHHH-HTTCCEEEECSCTTTHHHHHHHHHHTTCEEEECCCCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEccCCCHHHHh-ccCCcEEEEccChHHHHHHHHHHHHcCCCEEEcCCCC
Confidence 6899999999999999988765 888887775544444443 3466778888776233333333223368888888775
|
| >2c29_D Dihydroflavonol 4-reductase; flavonoids, short dehydrogenase reductase, NADPH, dihydroquercetin, rossmann fold, oxidoreductase; HET: NAP DQH; 1.81A {Vitis vinifera} PDB: 2iod_A* 2nnl_D* 3bxx_A* 3c1t_A* | Back alignment and structure |
|---|
Probab=96.11 E-value=0.015 Score=50.82 Aligned_cols=38 Identities=24% Similarity=0.225 Sum_probs=32.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
.+.+|||+||+|.+|..+++.+...|++|++++++.++
T Consensus 4 ~~~~vlVTGatGfIG~~l~~~L~~~G~~V~~~~r~~~~ 41 (337)
T 2c29_D 4 QSETVCVTGASGFIGSWLVMRLLERGYTVRATVRDPTN 41 (337)
T ss_dssp --CEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCTTC
T ss_pred CCCEEEEECCchHHHHHHHHHHHHCCCEEEEEECCcch
Confidence 45789999999999999998888889999999887653
|
| >2d0i_A Dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; 1.95A {Pyrococcus horikoshii} | Back alignment and structure |
|---|
Probab=96.09 E-value=0.023 Score=49.71 Aligned_cols=86 Identities=16% Similarity=0.188 Sum_probs=58.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|+|. |.+|...++.++..|.+|++.+++.++ +... ++|+.. . ++.+.+++ .|+|+.++
T Consensus 144 l~g~~vgIIG~-G~iG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~----~---~l~e~l~~-----aDiVil~v 208 (333)
T 2d0i_A 144 LYGKKVGILGM-GAIGKAIARRLIPFGVKLYYWSRHRKV-NVEK-ELKARY----M---DIDELLEK-----SDIVILAL 208 (333)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCH-HHHH-HHTEEE----C---CHHHHHHH-----CSEEEECC
T ss_pred CCcCEEEEEcc-CHHHHHHHHHHHHCCCEEEEECCCcch-hhhh-hcCcee----c---CHHHHHhh-----CCEEEEcC
Confidence 35679999996 999999999999999999999988776 5454 556421 1 22333332 67777777
Q ss_pred Chh-----hH-HHHHHhhhhCCEEEEEc
Q 019332 231 GGK-----ML-DAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 231 g~~-----~~-~~~~~~l~~~G~~v~~g 252 (342)
... .+ ...++.++++ .++.++
T Consensus 209 p~~~~t~~~i~~~~~~~mk~g-ilin~s 235 (333)
T 2d0i_A 209 PLTRDTYHIINEERVKKLEGK-YLVNIG 235 (333)
T ss_dssp CCCTTTTTSBCHHHHHHTBTC-EEEECS
T ss_pred CCChHHHHHhCHHHHhhCCCC-EEEECC
Confidence 652 12 2345667777 666655
|
| >2pbf_A Protein-L-isoaspartate O-methyltransferase beta-A methyltransferase; protein repair, isoaspartyl formation, P. falciparum; HET: SAH; 2.00A {Plasmodium falciparum} | Back alignment and structure |
|---|
Probab=96.08 E-value=0.051 Score=44.45 Aligned_cols=100 Identities=16% Similarity=0.147 Sum_probs=67.3
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcC------CEEEEEeCChhhHHHHHHH---cC-----CC--eeEecCCchh-H
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLG------CYVVGSAGSKDKIDLLKNK---FG-----FD--EAFNYKEEPD-L 211 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~g------a~Vi~~~~s~~~~~~~~~~---~g-----~~--~v~~~~~~~~-~ 211 (342)
.++++++||-.|+ | .|..+..+++..+ .+|++++.+++..+.+++. .+ .. .++..+.. + +
T Consensus 77 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~d~~-~~~ 153 (227)
T 2pbf_A 77 VLKPGSRAIDVGS-G-SGYLTVCMAIKMNVLENKNSYVIGLERVKDLVNFSLENIKRDKPELLKIDNFKIIHKNIY-QVN 153 (227)
T ss_dssp TSCTTCEEEEESC-T-TSHHHHHHHHHTTTTTCTTCEEEEEESCHHHHHHHHHHHHHHCGGGGSSTTEEEEECCGG-GCC
T ss_pred hCCCCCEEEEECC-C-CCHHHHHHHHHhcccCCCCCEEEEEeCCHHHHHHHHHHHHHcCccccccCCEEEEECChH-hcc
Confidence 5789999999995 3 4888999998876 5999999999877777632 23 21 22222111 1 1
Q ss_pred HHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEce
Q 019332 212 NEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 212 ~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+.... .+.+|+|+..... ..+..+.+.|+++|+++..-.
T Consensus 154 ~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lv~~~~ 194 (227)
T 2pbf_A 154 EEEKKE--LGLFDAIHVGASASELPEILVDLLAENGKLIIPIE 194 (227)
T ss_dssp HHHHHH--HCCEEEEEECSBBSSCCHHHHHHEEEEEEEEEEEE
T ss_pred cccCcc--CCCcCEEEECCchHHHHHHHHHhcCCCcEEEEEEc
Confidence 000011 1369999877665 566888999999999886543
|
| >1orr_A CDP-tyvelose-2-epimerase; rossmann fold, short-chain dehydrogenase/reductase, isomeras; HET: NAD CDP; 1.50A {Salmonella typhi} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=96.08 E-value=0.02 Score=50.12 Aligned_cols=74 Identities=19% Similarity=0.314 Sum_probs=47.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh--hh---HHHHHHHcC-CCe-eEecCCchhHHHHHHHHCCCCccEEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DK---IDLLKNKFG-FDE-AFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~--~~---~~~~~~~~g-~~~-v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
+|||+||+|.+|..+++.+...|++|++++++. .. .+.+. ..+ ... ..|..+...+.+.++.. .+|+||
T Consensus 3 ~vlVTGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~~~~l~-~~~~~~~~~~Dl~d~~~~~~~~~~~---~~d~vi 78 (347)
T 1orr_A 3 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNKNDVTRLITKY---MPDSCF 78 (347)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCHHHHHHHHHHH---CCSEEE
T ss_pred EEEEeCCCchhHHHHHHHHHhCCCEEEEEeCCCccCchhhhhhhc-cCCceEEEEcCCCCHHHHHHHHhcc---CCCEEE
Confidence 699999999999999998888899999998642 11 12222 222 211 12444431233333321 599999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
.++|.
T Consensus 79 h~A~~ 83 (347)
T 1orr_A 79 HLAGQ 83 (347)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99984
|
| >4ggo_A Trans-2-enoyl-COA reductase; rossmann fold, oxidoreductase; 2.00A {Treponema denticola atcc 35405} PDB: 4ggp_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.019 Score=50.86 Aligned_cols=81 Identities=16% Similarity=0.111 Sum_probs=51.4
Q ss_pred CCCCCEEEEecCCcHHHHH-HHHHHHHcCCEEEEEeCChhh----------------HHHHHHHcCCCe-eEe--cCCch
Q 019332 150 PKQGECVFISAASGAVGQL-VGQFAKLLGCYVVGSAGSKDK----------------IDLLKNKFGFDE-AFN--YKEEP 209 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~-ai~la~~~ga~Vi~~~~s~~~----------------~~~~~~~~g~~~-v~~--~~~~~ 209 (342)
...+.++||+|+++|+|+| ++.+|...|+.++++....+. .+.++ +.|... .++ -.++.
T Consensus 47 ~~~pK~vLVtGaSsGiGlA~AialAf~~GA~vi~v~~~~~~~~~~~atag~~~~~a~~~~i~-~~G~~a~~i~~Dv~d~e 125 (401)
T 4ggo_A 47 AKAPKNVLVLGCSNGYGLASRITAAFGYGAATIGVSFEKAGSETKYGTPGWYNNLAFDEAAK-REGLYSVTIDGDAFSDE 125 (401)
T ss_dssp SCCCCEEEEESCSSHHHHHHHHHHHHHHCCEEEEEECCCCCCSSSCCCHHHHHHHHHHHHHH-HHTCCEEEEESCTTSHH
T ss_pred cCCCCEEEEECCCCcHHHHHHHHHHhhCCCCEEEEecCCcccccccccccchhHHHHHHHHH-HcCCCceeEeCCCCCHH
Confidence 3457899999999999997 556676789999888764421 12344 556532 232 22221
Q ss_pred ---hHHHHHHHHCCCCccEEEeCCCh
Q 019332 210 ---DLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 210 ---~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
...+.+++. .|++|+++.+++.
T Consensus 126 ~i~~vi~~i~~~-~G~IDiLVhS~A~ 150 (401)
T 4ggo_A 126 IKAQVIEEAKKK-GIKFDLIVYSLAS 150 (401)
T ss_dssp HHHHHHHHHHHT-TCCEEEEEECCCC
T ss_pred HHHHHHHHHHHh-cCCCCEEEEeccc
Confidence 233444443 3479999998884
|
| >1udb_A Epimerase, UDP-galactose-4-epimerase; isomerase; HET: NAD UFG; 1.65A {Escherichia coli} SCOP: c.2.1.2 PDB: 1lrj_A* 1nai_A* 1uda_A* 1nah_A* 1xel_A* 1kvq_A* 1kvs_A* 1udc_A* 2udp_A* 1a9z_A* 1kvt_A* 1kvr_A* 1lrk_A* 1lrl_A* 1kvu_A* 1a9y_A* | Back alignment and structure |
|---|
Probab=96.07 E-value=0.02 Score=50.06 Aligned_cols=74 Identities=18% Similarity=0.175 Sum_probs=47.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh----hhHHHHHHHc-CCC-ee--EecCCchhHHHHHHHHCCCCccEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK----DKIDLLKNKF-GFD-EA--FNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~----~~~~~~~~~~-g~~-~v--~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
+|||+||+|.+|..+++.+...|++|+++.+.. +..+.+. ++ +.. .. .|..+...+.+.+++ .++|+|
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~~~~~~~~~~~~---~~~D~v 77 (338)
T 1udb_A 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCEEEEEecCCCcchhHHHHHH-hhcCCcceEEEccCCCHHHHHHHhhc---cCCCEE
Confidence 689999999999999998888899999987532 2233333 22 321 22 244443123333332 159999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|+++|.
T Consensus 78 ih~A~~ 83 (338)
T 1udb_A 78 IHFAGL 83 (338)
T ss_dssp EECCSC
T ss_pred EECCcc
Confidence 999873
|
| >3ngx_A Bifunctional protein fold; methylenetetrahydrofolate dehydrogenase/cyclohydrolase; 2.30A {Thermoplasma acidophilum} PDB: 3ngl_A | Back alignment and structure |
|---|
Probab=96.07 E-value=0.018 Score=48.46 Aligned_cols=85 Identities=14% Similarity=0.037 Sum_probs=61.8
Q ss_pred HHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCC
Q 019332 141 YAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 141 ~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
...|.+.. -.|.+++|.|+++-+|..+++++...|++|++..+.. . ++.+.+++
T Consensus 140 ~~lL~~~~--l~Gk~vvVvG~s~iVG~plA~lL~~~gAtVtv~~~~t--------------------~-~L~~~~~~--- 193 (276)
T 3ngx_A 140 IDIMDYYG--YHENTVTIVNRSPVVGRPLSMMLLNRNYTVSVCHSKT--------------------K-DIGSMTRS--- 193 (276)
T ss_dssp HHHHHHHT--CCSCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTC--------------------S-CHHHHHHH---
T ss_pred HHHHHHhC--cCCCEEEEEcCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------c-cHHHhhcc---
Confidence 33443434 6889999999867799999999999999988776421 1 44455554
Q ss_pred CCccEEEeCCChh-hHHHHHHhhhhCCEEEEEceec
Q 019332 221 EGIDIYFENVGGK-MLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 221 ~~~d~vid~~g~~-~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+|+++.++|.. .+. -+.++++..++.+|...
T Consensus 194 --ADIVI~Avg~p~~I~--~~~vk~GavVIDvgi~~ 225 (276)
T 3ngx_A 194 --SKIVVVAVGRPGFLN--REMVTPGSVVIDVGINY 225 (276)
T ss_dssp --SSEEEECSSCTTCBC--GGGCCTTCEEEECCCEE
T ss_pred --CCEEEECCCCCcccc--HhhccCCcEEEEeccCc
Confidence 79999999974 322 24578888889988754
|
| >3euw_A MYO-inositol dehydrogenase; protein structure initiative II (PSI II), NYSGXRC, MYO-inosi dehydrogenase, oxidoreductase, tetramer; 2.30A {Corynebacterium glutamicum} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.25 Score=43.28 Aligned_cols=87 Identities=14% Similarity=0.030 Sum_probs=57.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc-CCEEEEE-eCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL-GCYVVGS-AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~-~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
-+|.|+|+ |.+|...+..++.. +++++++ ++++++.+.+.+++|. .++ . ++.+.+. ...+|+|+.|+.
T Consensus 5 ~rvgiiG~-G~~g~~~~~~l~~~~~~~l~av~d~~~~~~~~~a~~~g~-~~~--~---~~~~~l~---~~~~D~V~i~tp 74 (344)
T 3euw_A 5 LRIALFGA-GRIGHVHAANIAANPDLELVVIADPFIEGAQRLAEANGA-EAV--A---SPDEVFA---RDDIDGIVIGSP 74 (344)
T ss_dssp EEEEEECC-SHHHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHTTTC-EEE--S---SHHHHTT---CSCCCEEEECSC
T ss_pred eEEEEECC-cHHHHHHHHHHHhCCCcEEEEEECCCHHHHHHHHHHcCC-cee--C---CHHHHhc---CCCCCEEEEeCC
Confidence 37899997 99998877766655 6787755 4566665555436774 322 2 3333322 126999999999
Q ss_pred h-hhHHHHHHhhhhCCEEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v~ 250 (342)
. ...+.+..++..+..+++
T Consensus 75 ~~~h~~~~~~al~~gk~v~~ 94 (344)
T 3euw_A 75 TSTHVDLITRAVERGIPALC 94 (344)
T ss_dssp GGGHHHHHHHHHHTTCCEEE
T ss_pred chhhHHHHHHHHHcCCcEEE
Confidence 8 566777778877766543
|
| >3dli_A Methyltransferase; PSI-II, NYSGXRC, structural genomics, protein structure initiative; 2.46A {Archaeoglobus fulgidus} | Back alignment and structure |
|---|
Probab=96.06 E-value=0.024 Score=46.93 Aligned_cols=95 Identities=18% Similarity=0.090 Sum_probs=64.5
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
..++++.+||=.|. |.|..+..+++. |++|++++.+++..+.++ +. . .++ .. +..+.+.....+.+|+|+
T Consensus 37 ~~~~~~~~vLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~~~~a~-~~-~-~~~---~~-d~~~~~~~~~~~~fD~i~ 106 (240)
T 3dli_A 37 PYFKGCRRVLDIGC--GRGEFLELCKEE-GIESIGVDINEDMIKFCE-GK-F-NVV---KS-DAIEYLKSLPDKYLDGVM 106 (240)
T ss_dssp GGTTTCSCEEEETC--TTTHHHHHHHHH-TCCEEEECSCHHHHHHHH-TT-S-EEE---CS-CHHHHHHTSCTTCBSEEE
T ss_pred hhhcCCCeEEEEeC--CCCHHHHHHHhC-CCcEEEEECCHHHHHHHH-hh-c-cee---ec-cHHHHhhhcCCCCeeEEE
Confidence 34678899999984 566667777766 889999999998888877 33 2 222 22 333333333344799998
Q ss_pred eCCC---------hhhHHHHHHhhhhCCEEEEEc
Q 019332 228 ENVG---------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 228 d~~g---------~~~~~~~~~~l~~~G~~v~~g 252 (342)
-... ...+..+.++|+|+|+++...
T Consensus 107 ~~~~l~~~~~~~~~~~l~~~~~~LkpgG~l~~~~ 140 (240)
T 3dli_A 107 ISHFVEHLDPERLFELLSLCYSKMKYSSYIVIES 140 (240)
T ss_dssp EESCGGGSCGGGHHHHHHHHHHHBCTTCCEEEEE
T ss_pred ECCchhhCCcHHHHHHHHHHHHHcCCCcEEEEEe
Confidence 5322 135678889999999988653
|
| >3jtm_A Formate dehydrogenase, mitochondrial; mitochondrion, NAD, oxidoreductase, T peptide; 1.30A {Arabidopsis thaliana} PDB: 3n7u_A* 3naq_A | Back alignment and structure |
|---|
Probab=96.04 E-value=0.019 Score=50.63 Aligned_cols=90 Identities=24% Similarity=0.233 Sum_probs=64.3
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|+|. |.+|...++.++.+|.+|++..++..+.+.+. +.|+..+ + ++.+.++ ..|+|+.+.
T Consensus 162 l~gktvGIIG~-G~IG~~vA~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~~ 228 (351)
T 3jtm_A 162 LEGKTIGTVGA-GRIGKLLLQRLKPFGCNLLYHDRLQMAPELEK-ETGAKFV----E--DLNEMLP-----KCDVIVINM 228 (351)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHGGGCCEEEEECSSCCCHHHHH-HHCCEEC----S--CHHHHGG-----GCSEEEECS
T ss_pred ccCCEEeEEEe-CHHHHHHHHHHHHCCCEEEEeCCCccCHHHHH-hCCCeEc----C--CHHHHHh-----cCCEEEECC
Confidence 35789999996 99999999999999999999998776556666 6776322 1 3333332 278888776
Q ss_pred Ch-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 231 GG-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
.. + .-...+..|+++..+|+++.
T Consensus 229 Plt~~t~~li~~~~l~~mk~gailIN~aR 257 (351)
T 3jtm_A 229 PLTEKTRGMFNKELIGKLKKGVLIVNNAR 257 (351)
T ss_dssp CCCTTTTTCBSHHHHHHSCTTEEEEECSC
T ss_pred CCCHHHHHhhcHHHHhcCCCCCEEEECcC
Confidence 63 1 12456677888888877764
|
| >3u81_A Catechol O-methyltransferase; neurotransmitter degradation, transferase transferase inhibitor complex; HET: SAH; 1.13A {Rattus norvegicus} SCOP: c.66.1.1 PDB: 3nwe_A* 3oe5_A* 3ozr_A* 3oe4_A* 3ozt_A* 3ozs_A* 3r6t_A* 3hvi_A* 1jr4_A* 1vid_A* 1h1d_A* 2cl5_A* 3hvh_A* 3hvj_A* 3hvk_A* 3nw9_A* 3nwb_A* 3s68_A* 2zlb_A 2zth_A* ... | Back alignment and structure |
|---|
Probab=96.04 E-value=0.015 Score=47.53 Aligned_cols=102 Identities=11% Similarity=0.063 Sum_probs=63.9
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC--
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~-- 220 (342)
....++.+||=.| .+.|..++.+++.+ +.+|++++.+++..+.+++ ..|....+..... +..+.+.....
T Consensus 54 ~~~~~~~~vLdiG--~G~G~~~~~la~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~v~~~~~-d~~~~l~~~~~~~ 130 (221)
T 3u81_A 54 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEINPDCAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY 130 (221)
T ss_dssp HHHHCCSEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGTTTTS
T ss_pred HHhcCCCEEEEEC--CCCCHHHHHHHHhCCCCCEEEEEeCChHHHHHHHHHHHHcCCCCceEEEEC-CHHHHHHHHHHhc
Confidence 3445778999998 46688888888865 6799999999988777764 2354321222222 44444443332
Q ss_pred --CCccEEEeCCChhhHH---HHH---HhhhhCCEEEEEc
Q 019332 221 --EGIDIYFENVGGKMLD---AVL---LNMKIHGRIAVCG 252 (342)
Q Consensus 221 --~~~d~vid~~g~~~~~---~~~---~~l~~~G~~v~~g 252 (342)
+.+|+|+-......+. ..+ +.|+|+|.++.-.
T Consensus 131 ~~~~fD~V~~d~~~~~~~~~~~~~~~~~~LkpgG~lv~~~ 170 (221)
T 3u81_A 131 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLADN 170 (221)
T ss_dssp CCCCCSEEEECSCGGGHHHHHHHHHHTTCCCTTCEEEESC
T ss_pred CCCceEEEEEcCCcccchHHHHHHHhccccCCCeEEEEeC
Confidence 3699987544332211 111 6899999987643
|
| >1r18_A Protein-L-isoaspartate(D-aspartate)-O-methyltrans; methyltransferase, isomerization, protein repair, S-adenosyl homocysteine; HET: SAH; 2.20A {Drosophila melanogaster} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.03 E-value=0.0028 Score=52.26 Aligned_cols=95 Identities=14% Similarity=0.150 Sum_probs=64.6
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcC-------CEEEEEeCChhhHHHHHHHc---C-----CC--eeEecCCchhH
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLG-------CYVVGSAGSKDKIDLLKNKF---G-----FD--EAFNYKEEPDL 211 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~g-------a~Vi~~~~s~~~~~~~~~~~---g-----~~--~v~~~~~~~~~ 211 (342)
.++++++||-.|+ | .|..+..+++..+ .+|++++.+++..+.+++.+ + .. .++.. +.
T Consensus 81 ~~~~~~~VLdiG~-G-~G~~~~~la~~~~~~~~~~~~~v~~vD~~~~~~~~a~~~~~~~~~~~~~~~~v~~~~~----d~ 154 (227)
T 1r18_A 81 HLKPGARILDVGS-G-SGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG----DG 154 (227)
T ss_dssp TCCTTCEEEEESC-T-TSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES----CG
T ss_pred hCCCCCEEEEECC-C-ccHHHHHHHHhcccccCCccCEEEEEEcCHHHHHHHHHHHHhcCccccCCCceEEEEC----Cc
Confidence 5789999999995 4 4888888888766 49999999998777666322 1 11 22221 11
Q ss_pred HHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 212 NEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 212 ~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
.+.+.. .+.+|+|+..... .....+.+.|+++|+++..
T Consensus 155 ~~~~~~--~~~fD~I~~~~~~~~~~~~~~~~LkpgG~lvi~ 193 (227)
T 1r18_A 155 RKGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVP 193 (227)
T ss_dssp GGCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred ccCCCc--CCCccEEEECCchHHHHHHHHHHhcCCCEEEEE
Confidence 111111 1369999877665 5667889999999998764
|
| >2x6t_A ADP-L-glycero-D-manno-heptose-6-epimerase; isomerase, carbohydrate metabolism, stress response; HET: NAP ADP BMA; 2.36A {Escherichia coli} PDB: 2x86_A* | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0057 Score=54.06 Aligned_cols=74 Identities=14% Similarity=0.216 Sum_probs=47.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHc-CCCeeEecCCchhHHHHHHHHCCC----CccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKF-GFDEAFNYKEEPDLNEALKRYFPE----GIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~-g~~~v~~~~~~~~~~~~i~~~~~~----~~d~v 226 (342)
+.+|||+||+|.+|..+++.+...| .+|+++.++..+.. +. .+ +.....|..+. +.+.+...+ ++|+|
T Consensus 46 ~~~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~-~~-~~~~~~~~~d~~~~----~~~~~~~~~~~~~~~d~V 119 (357)
T 2x6t_A 46 GRMIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTK-FV-NLVDLNIADYMDKE----DFLIQIMAGEEFGDVEAI 119 (357)
T ss_dssp --CEEEETTTSHHHHHHHHHHHHTTCCCEEEEECCSSGGG-GG-GTTTSCCSEEEEHH----HHHHHHHTTCCCSSCCEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCCCcEEEEEecCCCcch-hh-cccCceEeeecCcH----HHHHHHHhhcccCCCCEE
Confidence 4679999999999999999888889 89999998765421 11 22 11111232222 223333222 69999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|+++|.
T Consensus 120 ih~A~~ 125 (357)
T 2x6t_A 120 FHEGAC 125 (357)
T ss_dssp EECCSC
T ss_pred EECCcc
Confidence 999884
|
| >1vbf_A 231AA long hypothetical protein-L-isoaspartate O- methyltransferase; trimeric coiled coil assembly; 2.80A {Sulfolobus tokodaii} SCOP: c.66.1.7 | Back alignment and structure |
|---|
Probab=96.02 E-value=0.0092 Score=49.13 Aligned_cols=98 Identities=12% Similarity=0.054 Sum_probs=66.6
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC---CeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF---DEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
....+.++++||-.|. | .|..+..+++.. .+|++++.+++..+.+++.+.. -.++.. +..+.+. ..+.
T Consensus 64 ~~~~~~~~~~vLdiG~-G-~G~~~~~l~~~~-~~v~~vD~~~~~~~~a~~~~~~~~~v~~~~~----d~~~~~~--~~~~ 134 (231)
T 1vbf_A 64 DELDLHKGQKVLEIGT-G-IGYYTALIAEIV-DKVVSVEINEKMYNYASKLLSYYNNIKLILG----DGTLGYE--EEKP 134 (231)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHS-SEEEEEESCHHHHHHHHHHHTTCSSEEEEES----CGGGCCG--GGCC
T ss_pred HhcCCCCCCEEEEEcC-C-CCHHHHHHHHHc-CEEEEEeCCHHHHHHHHHHHhhcCCeEEEEC----Ccccccc--cCCC
Confidence 4457789999999995 3 488888888874 8999999999888888744332 122222 1111111 1236
Q ss_pred ccEEEeCCCh-hhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENVGG-KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+|+....- .....+.+.|+++|+++..-
T Consensus 135 fD~v~~~~~~~~~~~~~~~~L~pgG~l~~~~ 165 (231)
T 1vbf_A 135 YDRVVVWATAPTLLCKPYEQLKEGGIMILPI 165 (231)
T ss_dssp EEEEEESSBBSSCCHHHHHTEEEEEEEEEEE
T ss_pred ccEEEECCcHHHHHHHHHHHcCCCcEEEEEE
Confidence 9999876554 34567889999999988653
|
| >3ou2_A SAM-dependent methyltransferase; O-methyltransferase, SAH; HET: SAH; 1.50A {Streptomyces luridus} PDB: 3ou6_A* 3ou7_A* | Back alignment and structure |
|---|
Probab=96.01 E-value=0.016 Score=47.04 Aligned_cols=97 Identities=16% Similarity=0.167 Sum_probs=65.9
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
..+.++.+||-.|+ |.|..+..+++. |++|++++.+++-.+.++ +.+...+ .+... ++.+ + ...+.+|+|+
T Consensus 42 ~~~~~~~~vLdiG~--G~G~~~~~l~~~-~~~v~~~D~s~~~~~~a~-~~~~~~~-~~~~~-d~~~-~--~~~~~~D~v~ 112 (218)
T 3ou2_A 42 RAGNIRGDVLELAS--GTGYWTRHLSGL-ADRVTALDGSAEMIAEAG-RHGLDNV-EFRQQ-DLFD-W--TPDRQWDAVF 112 (218)
T ss_dssp TTTTSCSEEEEESC--TTSHHHHHHHHH-SSEEEEEESCHHHHHHHG-GGCCTTE-EEEEC-CTTS-C--CCSSCEEEEE
T ss_pred hcCCCCCeEEEECC--CCCHHHHHHHhc-CCeEEEEeCCHHHHHHHH-hcCCCCe-EEEec-cccc-C--CCCCceeEEE
Confidence 45778889999984 457788888877 889999999998888887 5663221 11111 2111 1 1223799998
Q ss_pred eCCC---------hhhHHHHHHhhhhCCEEEEEce
Q 019332 228 ENVG---------GKMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 228 d~~g---------~~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.... ...+..+.+.|+++|+++....
T Consensus 113 ~~~~l~~~~~~~~~~~l~~~~~~L~pgG~l~~~~~ 147 (218)
T 3ou2_A 113 FAHWLAHVPDDRFEAFWESVRSAVAPGGVVEFVDV 147 (218)
T ss_dssp EESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EechhhcCCHHHHHHHHHHHHHHcCCCeEEEEEeC
Confidence 6443 1346778889999999987654
|
| >2b2c_A Spermidine synthase; beta-alpha, transferase; 2.50A {Caenorhabditis elegans} SCOP: c.66.1.17 | Back alignment and structure |
|---|
Probab=96.01 E-value=0.02 Score=49.70 Aligned_cols=96 Identities=17% Similarity=0.101 Sum_probs=63.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCC------CeeEecCCchhHHHHHHHHCCCCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGF------DEAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~------~~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
.+.+||+.| +|.|..+..+++..+ .+|+++..+++-.+.+++.+.. +.-+..... +..+.+.. ..+.+|
T Consensus 108 ~~~~VLdIG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~Ar~~~~~~~~~~~~~rv~~~~~-D~~~~l~~-~~~~fD 183 (314)
T 2b2c_A 108 DPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAKKFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEFD 183 (314)
T ss_dssp SCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHHHHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCEE
T ss_pred CCCEEEEEc--CCcCHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHHhccccCCCCEEEEEC-hHHHHHHh-cCCCce
Confidence 457999999 466778888887754 5999999999888888754421 111222222 44444443 334799
Q ss_pred EEEeCCC-----------hhhHHHHHHhhhhCCEEEEE
Q 019332 225 IYFENVG-----------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 225 ~vid~~g-----------~~~~~~~~~~l~~~G~~v~~ 251 (342)
+|+-... .+.+..+.++|+++|.++.-
T Consensus 184 ~Ii~d~~~~~~~~~~l~t~~~l~~~~~~LkpgG~lv~~ 221 (314)
T 2b2c_A 184 VIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQ 221 (314)
T ss_dssp EEEECCC-------------HHHHHHHHEEEEEEEEEE
T ss_pred EEEEcCCCCCCcchhhhHHHHHHHHHhhcCCCeEEEEE
Confidence 9874331 24577888999999998864
|
| >3gg9_A D-3-phosphoglycerate dehydrogenase oxidoreductase; structural genomics, PSI-2, P structure initiative; 1.90A {Ralstonia solanacearum} | Back alignment and structure |
|---|
Probab=96.00 E-value=0.032 Score=49.12 Aligned_cols=88 Identities=22% Similarity=0.251 Sum_probs=64.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++.+|.+|++..++... +.+. +.|+..+ + ++.+.+++ .|+|+-+..
T Consensus 159 ~g~tvGIIGl-G~IG~~vA~~l~~~G~~V~~~d~~~~~-~~~~-~~g~~~~----~--~l~ell~~-----aDiV~l~~P 224 (352)
T 3gg9_A 159 KGQTLGIFGY-GKIGQLVAGYGRAFGMNVLVWGRENSK-ERAR-ADGFAVA----E--SKDALFEQ-----SDVLSVHLR 224 (352)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSHHHH-HHHH-HTTCEEC----S--SHHHHHHH-----CSEEEECCC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEECCCCCH-HHHH-hcCceEe----C--CHHHHHhh-----CCEEEEecc
Confidence 5789999996 999999999999999999999977533 4455 6676321 1 34444443 789988775
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
. + .-...+..++++..+|+++.
T Consensus 225 lt~~t~~li~~~~l~~mk~gailIN~aR 252 (352)
T 3gg9_A 225 LNDETRSIITVADLTRMKPTALFVNTSR 252 (352)
T ss_dssp CSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred CcHHHHHhhCHHHHhhCCCCcEEEECCC
Confidence 3 2 12466788899999998874
|
| >2c5a_A GDP-mannose-3', 5'-epimerase; short chain dehydratase/reductase, GDP-gulose, GDP-galactose, keto intermediate, vitamin C, SDR; HET: GDC NAD BTB; 1.4A {Arabidopsis thaliana} SCOP: c.2.1.2 PDB: 2c59_A* 2c54_A* 2c5e_A* | Back alignment and structure |
|---|
Probab=95.99 E-value=0.01 Score=53.03 Aligned_cols=74 Identities=19% Similarity=0.174 Sum_probs=49.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+.+|||+||+|.+|..+++.+...|++|++++++..+..... ..+... ..|..+. +.+.+... ++|+||.+++
T Consensus 29 ~~~vlVtGatG~iG~~l~~~L~~~g~~V~~~~r~~~~~~~~~-~~~v~~~~~Dl~d~----~~~~~~~~-~~d~Vih~A~ 102 (379)
T 2c5a_A 29 NLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHMTED-MFCDEFHLVDLRVM----ENCLKVTE-GVDHVFNLAA 102 (379)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSSCGG-GTCSEEEECCTTSH----HHHHHHHT-TCSEEEECCC
T ss_pred CCeEEEECCccHHHHHHHHHHHHCCCeEEEEECCCccchhhc-cCCceEEECCCCCH----HHHHHHhC-CCCEEEECce
Confidence 468999999999999999988888999999998765432211 122221 1243333 22333222 5999999987
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 103 ~ 103 (379)
T 2c5a_A 103 D 103 (379)
T ss_dssp C
T ss_pred e
Confidence 3
|
| >1r6d_A TDP-glucose-4,6-dehydratase; rossmann fold, short-chain dehydrogenase/reductase, lyase; HET: NAD DAU; 1.35A {Streptomyces venezuelae} SCOP: c.2.1.2 PDB: 1r66_A* | Back alignment and structure |
|---|
Probab=95.98 E-value=0.058 Score=47.02 Aligned_cols=72 Identities=11% Similarity=0.040 Sum_probs=46.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHc---C---CEEEEEeCChh--hHHHHHHHcC--CC-ee--EecCCchhHHHHHHHHCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL---G---CYVVGSAGSKD--KIDLLKNKFG--FD-EA--FNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~---g---a~Vi~~~~s~~--~~~~~~~~~g--~~-~v--~~~~~~~~~~~~i~~~~~~ 221 (342)
+|||+||+|.+|..+++.+... | .+|++++++.. +.+.+. .+. .. .+ .|..+. +.+.+.. +
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~~~~g~~~~~V~~~~r~~~~~~~~~~~-~~~~~~~~~~~~~Dl~d~----~~~~~~~-~ 75 (337)
T 1r6d_A 2 RLLVTGGAGFIGSHFVRQLLAGAYPDVPADEVIVLDSLTYAGNRANLA-PVDADPRLRFVHGDIRDA----GLLAREL-R 75 (337)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCTTSCCSEEEEEECCCTTCCGGGGG-GGTTCTTEEEEECCTTCH----HHHHHHT-T
T ss_pred eEEEECCccHHHHHHHHHHHhhhcCCCCceEEEEEECCCccCchhhhh-hcccCCCeEEEEcCCCCH----HHHHHHh-c
Confidence 6999999999999988877775 7 89999987542 112222 221 11 12 233332 3344444 4
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|+||.++|.
T Consensus 76 ~~d~Vih~A~~ 86 (337)
T 1r6d_A 76 GVDAIVHFAAE 86 (337)
T ss_dssp TCCEEEECCSC
T ss_pred CCCEEEECCCc
Confidence 69999999984
|
| >3slk_A Polyketide synthase extender module 2; rossmann fold, NADPH, oxidoreductase; HET: NDP; 3.00A {Saccharopolyspora spinosa} | Back alignment and structure |
|---|
Probab=95.97 E-value=0.031 Score=54.96 Aligned_cols=82 Identities=17% Similarity=0.196 Sum_probs=55.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHH-HcCC-EEEEEeCCh---hhH----HHHHHHcCCCe---eEecCCchhHHHHHHH
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAK-LLGC-YVVGSAGSK---DKI----DLLKNKFGFDE---AFNYKEEPDLNEALKR 217 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~-~~ga-~Vi~~~~s~---~~~----~~~~~~~g~~~---v~~~~~~~~~~~~i~~ 217 (342)
+.++.++||+|++|++|.+.++.+. ..|+ +|+.+.++. ++. +.++ +.|..- ..|-.+..++.+.+.+
T Consensus 527 ~~~~~~~lItGg~~GlG~aiA~~la~~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~G~~v~~~~~Dvsd~~~v~~~~~~ 605 (795)
T 3slk_A 527 WDAAGTVLVTGGTGALGAEVARHLVIERGVRNLVLVSRRGPAASGAAELVAQLT-AYGAEVSLQACDVADRETLAKVLAS 605 (795)
T ss_dssp CCTTSEEEEETTTSHHHHHHHHHHHHTSSCCEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred cccccceeeccCCCCcHHHHHHHHHHHcCCcEEEEeccCccchHHHHHHHHHHH-hcCCcEEEEEeecCCHHHHHHHHHH
Confidence 4678999999999999998887775 7899 699999883 222 2233 446532 2344554244444554
Q ss_pred HCCC-CccEEEeCCCh
Q 019332 218 YFPE-GIDIYFENVGG 232 (342)
Q Consensus 218 ~~~~-~~d~vid~~g~ 232 (342)
.... .+|++++++|.
T Consensus 606 ~~~~~~id~lVnnAGv 621 (795)
T 3slk_A 606 IPDEHPLTAVVHAAGV 621 (795)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred HHHhCCCEEEEECCCc
Confidence 4333 79999999984
|
| >1nvm_B Acetaldehyde dehydrogenase (acylating), 4-hydroxy-2-oxovalerate aldolase; sequestered tunnel, substrate channeling; HET: NAD; 1.70A {Pseudomonas SP} SCOP: c.2.1.3 d.81.1.1 | Back alignment and structure |
|---|
Probab=95.97 E-value=0.04 Score=47.68 Aligned_cols=90 Identities=17% Similarity=0.136 Sum_probs=60.4
Q ss_pred CEEEEecCCcHHHHHHHHHH-H-HcCCEEEEEeC-Chhh--HHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEE
Q 019332 154 ECVFISAASGAVGQLVGQFA-K-LLGCYVVGSAG-SKDK--IDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYF 227 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la-~-~~ga~Vi~~~~-s~~~--~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vi 227 (342)
-+|.|+| +|.+|...+..+ + ..++++++++. ++++ .+.++ ++|.... + + ++ +.+.+.+.+ ++|+|+
T Consensus 5 irVaIIG-~G~iG~~~~~~l~~~~~~~elvav~d~~~~~~~~~~a~-~~g~~~~--~-~--~~-e~ll~~~~~~~iDvV~ 76 (312)
T 1nvm_B 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--Y-A--GV-EGLIKLPEFADIDFVF 76 (312)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--S-S--HH-HHHHHSGGGGGEEEEE
T ss_pred CEEEEEc-CcHHHHHHHHHHHhhCcCeEEEEEEeCChhhhHHHHHH-HcCCCcc--c-C--CH-HHHHhccCCCCCcEEE
Confidence 5799999 599999888877 4 34677766654 4344 34555 7886421 1 1 33 334333223 699999
Q ss_pred eCCCh-hhHHHHHHhhhh--CCEEEEE
Q 019332 228 ENVGG-KMLDAVLLNMKI--HGRIAVC 251 (342)
Q Consensus 228 d~~g~-~~~~~~~~~l~~--~G~~v~~ 251 (342)
+|++. ...+.+..+++. |.++++.
T Consensus 77 ~atp~~~h~~~a~~al~a~~Gk~Vi~e 103 (312)
T 1nvm_B 77 DATSASAHVQNEALLRQAKPGIRLIDL 103 (312)
T ss_dssp ECSCHHHHHHHHHHHHHHCTTCEEEEC
T ss_pred ECCChHHHHHHHHHHHHhCCCCEEEEc
Confidence 99998 566778888888 8887764
|
| >3ggo_A Prephenate dehydrogenase; TYRA, HPP, NADH, alpha-beta, oxidoreductase; HET: NAI ENO; 2.15A {Aquifex aeolicus} PDB: 3ggg_D* 3ggp_A* | Back alignment and structure |
|---|
Probab=95.96 E-value=0.052 Score=47.05 Aligned_cols=88 Identities=13% Similarity=0.112 Sum_probs=62.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHH-HHHHHCCCCccEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNE-ALKRYFPEGIDIYFEN 229 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~-~i~~~~~~~~d~vid~ 229 (342)
.+|.|+|. |.+|.+.++.++..|. +|++.++++++.+.+. +.|.. ...+ +..+ .+ .+.|+||.|
T Consensus 34 ~kI~IIG~-G~mG~slA~~l~~~G~~~~V~~~dr~~~~~~~a~-~~G~~~~~~~-----~~~~~~~-----~~aDvVila 101 (314)
T 3ggo_A 34 QNVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTT-----SIAKVED-----FSPDFVMLS 101 (314)
T ss_dssp SEEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEES-----CTTGGGG-----GCCSEEEEC
T ss_pred CEEEEEee-CHHHHHHHHHHHhCCCCCEEEEEECCHHHHHHHH-HCCCcchhcC-----CHHHHhh-----ccCCEEEEe
Confidence 58999995 9999999999999998 9999999999888888 78863 2221 1111 11 147999998
Q ss_pred CChhhHH----HHHHhhhhCCEEEEEce
Q 019332 230 VGGKMLD----AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~~~~~----~~~~~l~~~G~~v~~g~ 253 (342)
+...... ...+.++++..++.+++
T Consensus 102 vp~~~~~~vl~~l~~~l~~~~iv~d~~S 129 (314)
T 3ggo_A 102 SPVRTFREIAKKLSYILSEDATVTDQGS 129 (314)
T ss_dssp SCGGGHHHHHHHHHHHSCTTCEEEECCS
T ss_pred CCHHHHHHHHHHHhhccCCCcEEEECCC
Confidence 8874433 34445566666666554
|
| >4had_A Probable oxidoreductase protein; structural genomics, protein structure initiative, nysgrc, PSI-biology; 2.00A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.94 E-value=0.21 Score=43.86 Aligned_cols=137 Identities=16% Similarity=0.178 Sum_probs=79.7
Q ss_pred CEEEEecCCcHHHHH-HHHHHHH-cCCEEEEEeC-ChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQL-VGQFAKL-LGCYVVGSAG-SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~-ai~la~~-~ga~Vi~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
=++.|+|+ |.+|.. .+...+. -++++++++. ++++.+.+.+++|...+++ ++.+.+.+ ..+|+|+-|.
T Consensus 24 irigiIG~-G~ig~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~-----d~~ell~~---~~iDaV~I~t 94 (350)
T 4had_A 24 LRFGIIST-AKIGRDNVVPAIQDAENCVVTAIASRDLTRAREMADRFSVPHAFG-----SYEEMLAS---DVIDAVYIPL 94 (350)
T ss_dssp EEEEEESC-CHHHHHTHHHHHHHCSSEEEEEEECSSHHHHHHHHHHHTCSEEES-----SHHHHHHC---SSCSEEEECS
T ss_pred cEEEEEcC-hHHHHHHHHHHHHhCCCeEEEEEECCCHHHHHHHHHHcCCCeeeC-----CHHHHhcC---CCCCEEEEeC
Confidence 47999996 999974 4554444 4789887765 5566665555899866542 44444432 3699999999
Q ss_pred Ch-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceee-ecceecccccchHHHHHHHHHHHHcCCce
Q 019332 231 GG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRM-EGFLVRDYYHLYPKFLEMIIPHIKEGKIV 307 (342)
Q Consensus 231 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~ 307 (342)
.. ...+.+..+|+.+-.+ ++.-+-..+. ..........-.++..+ .++ ...+...+..+-+++.+|.+-
T Consensus 95 P~~~H~~~~~~al~aGkhV-l~EKPla~~~--~ea~~l~~~a~~~~~~l~v~~-----~~R~~p~~~~~k~~i~~G~iG 165 (350)
T 4had_A 95 PTSQHIEWSIKAADAGKHV-VCEKPLALKA--GDIDAVIAARDRNKVVVTEAY-----MITYSPVWQKVRSLIDEGAIG 165 (350)
T ss_dssp CGGGHHHHHHHHHHTTCEE-EECSCCCSSG--GGGHHHHHHHHHHTCCEEECC-----GGGGSHHHHHHHHHHHTTTTS
T ss_pred CCchhHHHHHHHHhcCCEE-EEeCCcccch--hhHHHHHHHHHHcCCceeEee-----eeecCHHHHHhhHhhhcCCCC
Confidence 88 6778888888876664 4443211100 01111111112223322 222 223345567777888888764
|
| >3a06_A 1-deoxy-D-xylulose 5-phosphate reductoisomerase; MEP pathway, isoprene biosynthesis, metal- NADP, oxidoreductase; HET: NDP; 2.00A {Thermotoga maritima} PDB: 3a14_A* | Back alignment and structure |
|---|
Probab=95.92 E-value=0.079 Score=46.30 Aligned_cols=97 Identities=18% Similarity=0.269 Sum_probs=64.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc-CCEEEEEe--CChhhHHHHHHHcCCCeeEecCCchhHH----------HHHHHHCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL-GCYVVGSA--GSKDKIDLLKNKFGFDEAFNYKEEPDLN----------EALKRYFP 220 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~----------~~i~~~~~ 220 (342)
.+|.|.|++|.||..++++.+.. +++|++.+ ++.+++....++|+...+.-.++. ++. +.+.++..
T Consensus 4 k~i~ILGsTGSIG~~tldVi~~~~~~~vvaL~a~~n~~~l~~q~~~f~p~~v~v~~~~-~~~~~l~~~~~G~~~l~el~~ 82 (376)
T 3a06_A 4 RTLVILGATGSIGTQTLDVLKKVKGIRLIGISFHSNLELAFKIVKEFNVKNVAITGDV-EFEDSSINVWKGSHSIEEMLE 82 (376)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHSCSEEEEEEEESSCHHHHHHHHHHHTCCEEEECSSC-CCCCSSSEEEESTTHHHHHHH
T ss_pred ceEEEECCCCHHHHHHHHHHHhCCCeEEEEEEccCCHHHHHHHHHHcCCCEEEEccHH-HHHHHHHHHccCHHHHHHHhc
Confidence 57999999999999999999887 46888663 455555444337888654322221 111 11112111
Q ss_pred -CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 221 -EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 -~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
..+|+|+.+.-+ ..+...+..++.|-++.+.
T Consensus 83 ~~~~D~Vv~AivG~aGL~ptlaAi~aGK~vaLA 115 (376)
T 3a06_A 83 ALKPDITMVAVSGFSGLRAVLASLEHSKRVCLA 115 (376)
T ss_dssp HHCCSEEEECCCSTTHHHHHHHHHHHCSEEEEC
T ss_pred CCCCCEEEEEeeCHHHHHHHHHHHHCCCEEEEe
Confidence 148999998877 7888888899888777663
|
| >1vpd_A Tartronate semialdehyde reductase; structural genomics, MCSG, protein structure initiative, PSI, midwest center for structural genomics; HET: MSE TLA; 1.65A {Salmonella typhimurium} SCOP: a.100.1.1 c.2.1.6 | Back alignment and structure |
|---|
Probab=95.92 E-value=0.061 Score=46.13 Aligned_cols=86 Identities=13% Similarity=0.043 Sum_probs=60.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-h
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-K 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~ 233 (342)
+|.|+|+ |.+|...+..+...|.+|++.++++++.+.+. +.|... .. ++.+.+.+ +|+|+.|+.. .
T Consensus 7 ~i~iiG~-G~~G~~~a~~l~~~g~~V~~~~~~~~~~~~~~-~~g~~~---~~---~~~~~~~~-----~D~vi~~v~~~~ 73 (299)
T 1vpd_A 7 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET---AS---TAKAIAEQ-----CDVIITMLPNSP 73 (299)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE---CS---SHHHHHHH-----CSEEEECCSSHH
T ss_pred eEEEECc-hHHHHHHHHHHHhCCCEEEEEeCCHHHHHHHH-HCCCee---cC---CHHHHHhC-----CCEEEEECCCHH
Confidence 7999995 99999988888888999999999998888777 556521 11 33333432 7999999984 4
Q ss_pred hHHHHH-------HhhhhCCEEEEEce
Q 019332 234 MLDAVL-------LNMKIHGRIAVCGM 253 (342)
Q Consensus 234 ~~~~~~-------~~l~~~G~~v~~g~ 253 (342)
.+...+ +.++++..++.++.
T Consensus 74 ~~~~~~~~~~~l~~~l~~~~~vv~~s~ 100 (299)
T 1vpd_A 74 HVKEVALGENGIIEGAKPGTVLIDMSS 100 (299)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECSC
T ss_pred HHHHHHhCcchHhhcCCCCCEEEECCC
Confidence 444444 45666666666543
|
| >3pef_A 6-phosphogluconate dehydrogenase, NAD-binding; gamma-hydroxybutyrate dehydrogenase, succinic semialdehyde R geobacter metallireducens; HET: NAP; 2.07A {Geobacter metallireducens} | Back alignment and structure |
|---|
Probab=95.91 E-value=0.067 Score=45.65 Aligned_cols=86 Identities=15% Similarity=0.124 Sum_probs=59.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG- 232 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 232 (342)
.+|.|+|. |.+|...++.+...|.+|++..+++++.+.+. +.|+... . ++.+.+.+ .|+||-|+..
T Consensus 2 ~~i~iIG~-G~mG~~~a~~l~~~G~~V~~~dr~~~~~~~~~-~~g~~~~---~---~~~~~~~~-----aDvvi~~vp~~ 68 (287)
T 3pef_A 2 QKFGFIGL-GIMGSAMAKNLVKAGCSVTIWNRSPEKAEELA-ALGAERA---A---TPCEVVES-----CPVTFAMLADP 68 (287)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSGGGGHHHH-HTTCEEC---S---SHHHHHHH-----CSEEEECCSSH
T ss_pred CEEEEEee-cHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-HCCCeec---C---CHHHHHhc-----CCEEEEEcCCH
Confidence 47899996 99999988888888999999999999888887 6665221 1 33334433 6888888874
Q ss_pred hhHHHHH-------HhhhhCCEEEEEc
Q 019332 233 KMLDAVL-------LNMKIHGRIAVCG 252 (342)
Q Consensus 233 ~~~~~~~-------~~l~~~G~~v~~g 252 (342)
..+...+ +.++++..++..+
T Consensus 69 ~~~~~v~~~~~~l~~~l~~~~~vi~~s 95 (287)
T 3pef_A 69 AAAEEVCFGKHGVLEGIGEGRGYVDMS 95 (287)
T ss_dssp HHHHHHHHSTTCHHHHCCTTCEEEECS
T ss_pred HHHHHHHcCcchHhhcCCCCCEEEeCC
Confidence 4444433 4455555555554
|
| >2j6i_A Formate dehydrogenase; oxidoreductase, D-specific-2- hydroxy acid dehydrogenase, cofactor regenerator, yeast, CBFDH; HET: PG4; 1.55A {Candida boidinii} PDB: 2fss_A | Back alignment and structure |
|---|
Probab=95.87 E-value=0.016 Score=51.45 Aligned_cols=90 Identities=17% Similarity=0.110 Sum_probs=63.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-.|.+|.|+|. |.+|...++.++.+|++ |++..++..+.+.+. ++|+..+ . ++.+.++ ..|+|+.+
T Consensus 162 l~g~tvgIIG~-G~IG~~vA~~l~~~G~~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~-----~aDvV~l~ 228 (364)
T 2j6i_A 162 IEGKTIATIGA-GRIGYRVLERLVPFNPKELLYYDYQALPKDAEE-KVGARRV----E--NIEELVA-----QADIVTVN 228 (364)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHGGGCCSEEEEECSSCCCHHHHH-HTTEEEC----S--SHHHHHH-----TCSEEEEC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHhCCCcEEEEECCCccchhHHH-hcCcEec----C--CHHHHHh-----cCCEEEEC
Confidence 36789999996 99999999999999996 999998776656565 6775321 1 3333333 27888887
Q ss_pred CChh-----hH-HHHHHhhhhCCEEEEEce
Q 019332 230 VGGK-----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~~-----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
+... .+ ...+..|++++.++.++.
T Consensus 229 ~P~t~~t~~li~~~~l~~mk~ga~lIn~ar 258 (364)
T 2j6i_A 229 APLHAGTKGLINKELLSKFKKGAWLVNTAR 258 (364)
T ss_dssp CCCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCCChHHHHHhCHHHHhhCCCCCEEEECCC
Confidence 7641 12 345677777777777764
|
| >1i1n_A Protein-L-isoaspartate O-methyltransferase; S-adenosyl homocysteine, protein repair; HET: SAH; 1.50A {Homo sapiens} SCOP: c.66.1.7 PDB: 1kr5_A* | Back alignment and structure |
|---|
Probab=95.86 E-value=0.0066 Score=49.84 Aligned_cols=97 Identities=18% Similarity=0.151 Sum_probs=64.6
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHH---cC-----CCeeEecCCchhHHHHHHHH
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNK---FG-----FDEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~---~g-----~~~v~~~~~~~~~~~~i~~~ 218 (342)
.++++++||-.|+ |.|..+..+++..| .+|++++.+++..+.+++. .+ ... +..... +..... .
T Consensus 74 ~~~~~~~vLDiG~--G~G~~~~~la~~~~~~~~v~~vD~s~~~~~~a~~~~~~~~~~~~~~~~-v~~~~~-d~~~~~--~ 147 (226)
T 1i1n_A 74 QLHEGAKALDVGS--GSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGR-VQLVVG-DGRMGY--A 147 (226)
T ss_dssp TSCTTCEEEEETC--TTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSS-EEEEES-CGGGCC--G
T ss_pred hCCCCCEEEEEcC--CcCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHhhcccccCCCc-EEEEEC-CcccCc--c
Confidence 4788999999985 34888888888776 5999999999887777632 22 111 111111 111000 0
Q ss_pred CCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 219 FPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 219 ~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
..+.+|+|+..... ..+..+.++|+++|+++..
T Consensus 148 ~~~~fD~i~~~~~~~~~~~~~~~~LkpgG~lv~~ 181 (226)
T 1i1n_A 148 EEAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP 181 (226)
T ss_dssp GGCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred cCCCcCEEEECCchHHHHHHHHHhcCCCcEEEEE
Confidence 12369999876665 5668889999999998865
|
| >4hy3_A Phosphoglycerate oxidoreductase; PSI-biology, structural genomics, protein structure initiati acid transport and metabolism, NAD binding domain.; 2.80A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.86 E-value=0.032 Score=49.30 Aligned_cols=86 Identities=13% Similarity=0.140 Sum_probs=61.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++.+|.+|++..++.. .+.+. +.|+.. . ++.+.+++ .|+|+-+..
T Consensus 175 ~gktvGIIGl-G~IG~~vA~~l~~fG~~V~~~d~~~~-~~~~~-~~g~~~----~---~l~ell~~-----aDvV~l~~P 239 (365)
T 4hy3_A 175 AGSEIGIVGF-GDLGKALRRVLSGFRARIRVFDPWLP-RSMLE-ENGVEP----A---SLEDVLTK-----SDFIFVVAA 239 (365)
T ss_dssp SSSEEEEECC-SHHHHHHHHHHTTSCCEEEEECSSSC-HHHHH-HTTCEE----C---CHHHHHHS-----CSEEEECSC
T ss_pred CCCEEEEecC-CcccHHHHHhhhhCCCEEEEECCCCC-HHHHh-hcCeee----C---CHHHHHhc-----CCEEEEcCc
Confidence 4789999996 99999999999999999999988753 34444 566532 1 34334432 788887665
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEc
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g 252 (342)
. + .-...+..+++++.+|+++
T Consensus 240 lt~~T~~li~~~~l~~mk~gailIN~a 266 (365)
T 4hy3_A 240 VTSENKRFLGAEAFSSMRRGAAFILLS 266 (365)
T ss_dssp SSCC---CCCHHHHHTSCTTCEEEECS
T ss_pred CCHHHHhhcCHHHHhcCCCCcEEEECc
Confidence 3 1 1246677888888888877
|
| >2p5y_A UDP-glucose 4-epimerase; TTHA0591, structural genomics, PSI; HET: NAD; 1.92A {Thermus thermophilus HB8} PDB: 2p5u_A* | Back alignment and structure |
|---|
Probab=95.84 E-value=0.031 Score=48.19 Aligned_cols=73 Identities=10% Similarity=0.059 Sum_probs=46.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|||+||+|.+|..+++.+...|++|+++++.... .+.+. -+... ..|..+...+.+.+++ .++|+|+.+++.
T Consensus 2 ~vlVTGatG~iG~~l~~~L~~~G~~V~~~~r~~~~~~~~~~--~~~~~~~~Dl~~~~~~~~~~~~---~~~d~vi~~a~~ 76 (311)
T 2p5y_A 2 RVLVTGGAGFIGSHIVEDLLARGLEVAVLDNLATGKRENVP--KGVPFFRVDLRDKEGVERAFRE---FRPTHVSHQAAQ 76 (311)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEECCCSSCCGGGSC--TTCCEECCCTTCHHHHHHHHHH---HCCSEEEECCSC
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCCcCchhhcc--cCeEEEECCCCCHHHHHHHHHh---cCCCEEEECccc
Confidence 69999999999999999888889999999874322 11110 12211 1244443123333332 158999998874
|
| >2nac_A NAD-dependent formate dehydrogenase; oxidoreductase(aldehyde(D),NAD+(A)); 1.80A {Pseudomonas SP} SCOP: c.2.1.4 c.23.12.1 PDB: 2nad_A* 2go1_A 2gug_A* 2gsd_A* 3fn4_A | Back alignment and structure |
|---|
Probab=95.84 E-value=0.021 Score=50.97 Aligned_cols=89 Identities=16% Similarity=0.025 Sum_probs=61.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|. |.+|...++.++.+|.+|++..++..+.+... ++|+... . ++.+.++ ..|+|+.+..
T Consensus 190 ~gktvGIIGl-G~IG~~vA~~l~a~G~~V~~~d~~~~~~~~~~-~~G~~~~----~--~l~ell~-----~aDvV~l~~P 256 (393)
T 2nac_A 190 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTWH----A--TREDMYP-----VCDVVTLNCP 256 (393)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHGG-----GCSEEEECSC
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHhCCCEEEEEcCCccchhhHh-hcCceec----C--CHHHHHh-----cCCEEEEecC
Confidence 5789999996 99999999999999999999998765555555 6776321 1 2322222 2677777766
Q ss_pred h-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 232 G-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
. + .+ ...+..|+++..+++++.
T Consensus 257 lt~~t~~li~~~~l~~mk~gailIN~aR 284 (393)
T 2nac_A 257 LHPETEHMINDETLKLFKRGAYIVNTAR 284 (393)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CchHHHHHhhHHHHhhCCCCCEEEECCC
Confidence 3 1 12 355667777777777664
|
| >4gek_A TRNA (CMO5U34)-methyltransferase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc, rossmann fold; HET: GEK; 1.50A {Escherichia coli} PDB: 1im8_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.019 Score=48.43 Aligned_cols=97 Identities=13% Similarity=0.207 Sum_probs=63.8
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHc---CCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCCc
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLL---GCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~---ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
+++|.+||=.| .|.|..+..+++.. |++|++++.|++-.+.+++.+ +...-+..... + +.++..+.+
T Consensus 68 ~~~~~~vLDlG--cGtG~~~~~la~~~~~~~~~v~gvD~s~~ml~~A~~~~~~~~~~~~v~~~~~-D----~~~~~~~~~ 140 (261)
T 4gek_A 68 VQPGTQVYDLG--CSLGAATLSVRRNIHHDNCKIIAIDNSPAMIERCRRHIDAYKAPTPVDVIEG-D----IRDIAIENA 140 (261)
T ss_dssp CCTTCEEEEET--CTTTHHHHHHHHTCCSSSCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-C----TTTCCCCSE
T ss_pred CCCCCEEEEEe--CCCCHHHHHHHHhcCCCCCEEEEEECCHHHHHHHHHHHHhhccCceEEEeec-c----ccccccccc
Confidence 78999999999 46688888888764 679999999998777776432 33211222111 1 112222357
Q ss_pred cEEEeCCC-----h----hhHHHHHHhhhhCCEEEEEce
Q 019332 224 DIYFENVG-----G----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 224 d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
|+|+-... . ..+..+.+.|+|||+++....
T Consensus 141 d~v~~~~~l~~~~~~~~~~~l~~i~~~LkpGG~lii~e~ 179 (261)
T 4gek_A 141 SMVVLNFTLQFLEPSERQALLDKIYQGLNPGGALVLSEK 179 (261)
T ss_dssp EEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccceeeeeeeecCchhHhHHHHHHHHHcCCCcEEEEEec
Confidence 88765332 1 246788899999999987643
|
| >2o07_A Spermidine synthase; structural genomics, structural genomics consortium, SGC, transferase; HET: SPD MTA; 1.89A {Homo sapiens} SCOP: c.66.1.17 PDB: 2o06_A* 2o05_A* 2o0l_A* 3rw9_A* | Back alignment and structure |
|---|
Probab=95.83 E-value=0.011 Score=51.12 Aligned_cols=98 Identities=17% Similarity=0.209 Sum_probs=63.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcC-----C-CeeEecCCchhHHHHHHHHCCCCc
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFG-----F-DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g-----~-~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
.++.+||+.| +|.|..+..+++..+ .+|+++..+++-.+.+++.+. . +.-+..... +..+.+.. ..+.+
T Consensus 94 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~ar~~~~~~~~~~~~~rv~v~~~-Da~~~l~~-~~~~f 169 (304)
T 2o07_A 94 PNPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSKKFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQDAF 169 (304)
T ss_dssp SSCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSSCE
T ss_pred CCCCEEEEEC--CCchHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHhh-CCCCc
Confidence 4568999999 466778888887754 599999999988777774331 1 111111112 33333433 23479
Q ss_pred cEEE-eCCC----------hhhHHHHHHhhhhCCEEEEEc
Q 019332 224 DIYF-ENVG----------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 224 d~vi-d~~g----------~~~~~~~~~~l~~~G~~v~~g 252 (342)
|+|+ |... .+.+..+.++|+++|.++.-.
T Consensus 170 D~Ii~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 209 (304)
T 2o07_A 170 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQG 209 (304)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCCCCcchhhhHHHHHHHHHhccCCCeEEEEec
Confidence 9987 4332 135788899999999988643
|
| >2w2k_A D-mandelate dehydrogenase; 2-hydroxyacid dehydrogenase, oxidoreductase; 1.85A {Rhodotorula graminis} PDB: 2w2l_A* 2w2l_D* 2w2k_B | Back alignment and structure |
|---|
Probab=95.82 E-value=0.044 Score=48.26 Aligned_cols=90 Identities=22% Similarity=0.219 Sum_probs=62.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHH-HcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAK-LLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~-~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-.|.+|.|+|. |.+|...++.++ ..|.+|++..++.++.+... ++|...+ . ++.+.+++ .|+|+.+
T Consensus 161 l~g~~vgIIG~-G~IG~~vA~~l~~~~G~~V~~~d~~~~~~~~~~-~~g~~~~----~--~l~ell~~-----aDvVil~ 227 (348)
T 2w2k_A 161 PRGHVLGAVGL-GAIQKEIARKAVHGLGMKLVYYDVAPADAETEK-ALGAERV----D--SLEELARR-----SDCVSVS 227 (348)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCCEEEEECSSCCCHHHHH-HHTCEEC----S--SHHHHHHH-----CSEEEEC
T ss_pred CCCCEEEEEEE-CHHHHHHHHHHHHhcCCEEEEECCCCcchhhHh-hcCcEEe----C--CHHHHhcc-----CCEEEEe
Confidence 45789999996 999999999999 99999999998876655555 6665321 1 33333332 6888777
Q ss_pred CCh-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 230 VGG-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
+.. . .+ ...++.++++..++.++.
T Consensus 228 vp~~~~t~~li~~~~l~~mk~gailin~sr 257 (348)
T 2w2k_A 228 VPYMKLTHHLIDEAFFAAMKPGSRIVNTAR 257 (348)
T ss_dssp CCCSGGGTTCBCHHHHHHSCTTEEEEECSC
T ss_pred CCCChHHHHHhhHHHHhcCCCCCEEEECCC
Confidence 654 2 11 345566777777766654
|
| >1xj5_A Spermidine synthase 1; structural genomics, protein structure initiative, CESG, AT1G23820, putrescine aminopropyl transferase, SPDS1; 2.70A {Arabidopsis thaliana} SCOP: c.66.1.17 PDB: 2q41_A | Back alignment and structure |
|---|
Probab=95.81 E-value=0.012 Score=51.53 Aligned_cols=99 Identities=18% Similarity=0.171 Sum_probs=65.0
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHc-----CC-CeeEecCCchhHHHHHHHHCCCC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKF-----GF-DEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~-----g~-~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
...+.+||..| +|.|..+..+++..+ .+|+++..+++-.+.+++.+ |. +.-+..... +..+.+.....+.
T Consensus 118 ~~~~~~VLdIG--~G~G~~a~~la~~~~~~~V~~VDis~~~l~~Ar~~~~~~~~gl~~~rv~~~~~-D~~~~l~~~~~~~ 194 (334)
T 1xj5_A 118 IPNPKKVLVIG--GGDGGVLREVARHASIEQIDMCEIDKMVVDVSKQFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGS 194 (334)
T ss_dssp SSCCCEEEEET--CSSSHHHHHHTTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTC
T ss_pred CCCCCEEEEEC--CCccHHHHHHHHcCCCCEEEEEECCHHHHHHHHHHHHhhccccCCCcEEEEEC-CHHHHHHhccCCC
Confidence 34568999999 456778888888764 59999999998877777433 11 111222222 4444444333347
Q ss_pred ccEEEe-CC---C-------hhhHHHHHHhhhhCCEEEEE
Q 019332 223 IDIYFE-NV---G-------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 223 ~d~vid-~~---g-------~~~~~~~~~~l~~~G~~v~~ 251 (342)
+|+|+- +. + ...+..+.+.|+++|.++.-
T Consensus 195 fDlIi~d~~~p~~~~~~l~~~~~l~~~~~~LkpgG~lv~~ 234 (334)
T 1xj5_A 195 YDAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 234 (334)
T ss_dssp EEEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred ccEEEECCCCccCcchhhhHHHHHHHHHHhcCCCcEEEEe
Confidence 998874 32 1 24677889999999999874
|
| >1dl5_A Protein-L-isoaspartate O-methyltransferase; isoaspartyl residues, protein repair, deamidation, post-translational modification; HET: SAH; 1.80A {Thermotoga maritima} SCOP: c.66.1.7 d.197.1.1 | Back alignment and structure |
|---|
Probab=95.80 E-value=0.011 Score=51.42 Aligned_cols=101 Identities=20% Similarity=0.236 Sum_probs=66.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
....++++++||-.|. | .|..+..+++..+ .+|++++.+++..+.+++. .|... +..... +..+... ..
T Consensus 69 ~~l~~~~~~~VLDiGc-G-~G~~~~~la~~~~~~~~v~gvD~s~~~~~~a~~~~~~~g~~~-v~~~~~-d~~~~~~--~~ 142 (317)
T 1dl5_A 69 EWVGLDKGMRVLEIGG-G-TGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIEN-VIFVCG-DGYYGVP--EF 142 (317)
T ss_dssp HHTTCCTTCEEEEECC-T-TSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCS-EEEEES-CGGGCCG--GG
T ss_pred HhcCCCCcCEEEEecC-C-chHHHHHHHHhcCCCCEEEEEECCHHHHHHHHHHHHHcCCCC-eEEEEC-Chhhccc--cC
Confidence 4567889999999995 4 3888888888754 4799999999888777633 24432 111111 2111111 11
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEc
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g 252 (342)
+.+|+|+....- .....+.+.|+|+|+++..-
T Consensus 143 ~~fD~Iv~~~~~~~~~~~~~~~LkpgG~lvi~~ 175 (317)
T 1dl5_A 143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVPI 175 (317)
T ss_dssp CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEEB
T ss_pred CCeEEEEEcCCHHHHHHHHHHhcCCCcEEEEEE
Confidence 369999876655 33467788999999987653
|
| >3bwc_A Spermidine synthase; SAM, SGPP, structura genomics, PSI, protein structure initiative, structural GEN pathogenic protozoa consortium; HET: MSE SAM; 2.30A {Trypanosoma cruzi} PDB: 3bwb_A* | Back alignment and structure |
|---|
Probab=95.79 E-value=0.015 Score=50.24 Aligned_cols=99 Identities=15% Similarity=0.074 Sum_probs=63.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcC------CCeeEecCCchhHHHHHHHHCCCCc
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFG------FDEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g------~~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
.++.+||+.| +|.|..+..+++..+ .+|+++..+++-.+.+++.+. .+.-+..... +..+.+.+...+.+
T Consensus 94 ~~~~~VLdiG--~G~G~~~~~l~~~~~~~~v~~vDid~~~i~~a~~~~~~~~~~~~~~~v~~~~~-D~~~~~~~~~~~~f 170 (304)
T 3bwc_A 94 PKPERVLIIG--GGDGGVLREVLRHGTVEHCDLVDIDGEVMEQSKQHFPQISRSLADPRATVRVG-DGLAFVRQTPDNTY 170 (304)
T ss_dssp SSCCEEEEEE--CTTSHHHHHHHTCTTCCEEEEEESCHHHHHHHHHHCHHHHGGGGCTTEEEEES-CHHHHHHSSCTTCE
T ss_pred CCCCeEEEEc--CCCCHHHHHHHhCCCCCEEEEEECCHHHHHHHHHHhHHhhcccCCCcEEEEEC-cHHHHHHhccCCce
Confidence 5678999999 456777888887654 599999999987777774331 0111111112 33333332223479
Q ss_pred cEEEeCCC-----------hhhHHHHHHhhhhCCEEEEEc
Q 019332 224 DIYFENVG-----------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 224 d~vid~~g-----------~~~~~~~~~~l~~~G~~v~~g 252 (342)
|+|+-... .+.+..+.++|+++|.++...
T Consensus 171 DvIi~d~~~~~~~~~~l~~~~~l~~~~~~LkpgG~lv~~~ 210 (304)
T 3bwc_A 171 DVVIIDTTDPAGPASKLFGEAFYKDVLRILKPDGICCNQG 210 (304)
T ss_dssp EEEEEECC---------CCHHHHHHHHHHEEEEEEEEEEE
T ss_pred eEEEECCCCccccchhhhHHHHHHHHHHhcCCCcEEEEec
Confidence 99875321 245778889999999998753
|
| >1gdh_A D-glycerate dehydrogenase; oxidoreductase(CHOH (D)-NAD(P)+ (A)); 2.40A {Hyphomicrobium methylovorum} SCOP: c.2.1.4 c.23.12.1 | Back alignment and structure |
|---|
Probab=95.79 E-value=0.043 Score=47.71 Aligned_cols=89 Identities=10% Similarity=0.057 Sum_probs=64.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC-ChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG-SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-.|.+|.|+|. |.+|...++.++.+|.+|++..+ +.++ ..+. ++|+.. .+ ++.+.+.+ .|+|+.+
T Consensus 144 l~g~~vgIIG~-G~IG~~~A~~l~~~G~~V~~~d~~~~~~-~~~~-~~g~~~----~~--~l~ell~~-----aDvVil~ 209 (320)
T 1gdh_A 144 LDNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASS-SDEA-SYQATF----HD--SLDSLLSV-----SQFFSLN 209 (320)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCH-HHHH-HHTCEE----CS--SHHHHHHH-----CSEEEEC
T ss_pred CCCCEEEEECc-CHHHHHHHHHHHHCCCEEEEECCCCcCh-hhhh-hcCcEE----cC--CHHHHHhh-----CCEEEEe
Confidence 35789999996 99999999999999999999998 7765 3455 677632 11 33333432 7888888
Q ss_pred CCh-h----hH-HHHHHhhhhCCEEEEEce
Q 019332 230 VGG-K----ML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 230 ~g~-~----~~-~~~~~~l~~~G~~v~~g~ 253 (342)
+.. + .+ ...++.++++..++.++.
T Consensus 210 ~p~~~~t~~~i~~~~l~~mk~gailIn~ar 239 (320)
T 1gdh_A 210 APSTPETRYFFNKATIKSLPQGAIVVNTAR 239 (320)
T ss_dssp CCCCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred ccCchHHHhhcCHHHHhhCCCCcEEEECCC
Confidence 764 2 12 346677888888888775
|
| >1eq2_A ADP-L-glycero-D-mannoheptose 6-epimerase; N-terminal domain rossmann fold, C-terminal mixed alpha/beta domain; HET: NAP ADQ; 2.00A {Escherichia coli} SCOP: c.2.1.2 | Back alignment and structure |
|---|
Probab=95.78 E-value=0.021 Score=49.12 Aligned_cols=71 Identities=13% Similarity=0.140 Sum_probs=47.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhH--HHHHHHcCCCeeEecCCchhHHHHHHHHCCC----CccEEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKI--DLLKNKFGFDEAFNYKEEPDLNEALKRYFPE----GIDIYF 227 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~--~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~----~~d~vi 227 (342)
+|||+||+|.+|..+++.+...| .+|+++.+++.+. ..+. ... ...|..+ .+.+.+...+ ++|+||
T Consensus 1 ~vlVtGatG~iG~~l~~~L~~~g~~~V~~~~r~~~~~~~~~~~-~~~--~~~d~~~----~~~~~~~~~~~~~~~~d~vi 73 (310)
T 1eq2_A 1 MIIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLN--IADYMDK----EDFLIQIMAGEEFGDVEAIF 73 (310)
T ss_dssp CEEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSC--CSEEEEH----HHHHHHHHTTCCCSSCCEEE
T ss_pred CEEEEcCccHHHHHHHHHHHHCCCcEEEEEccCCCCchhhhcC-cce--ecccccc----HHHHHHHHhccccCCCcEEE
Confidence 48999999999999999888889 7999999876542 2222 221 1123322 2233333333 699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
.+++.
T Consensus 74 ~~a~~ 78 (310)
T 1eq2_A 74 HEGAC 78 (310)
T ss_dssp ECCSC
T ss_pred ECccc
Confidence 99874
|
| >1b0a_A Protein (fold bifunctional protein); folate, dehydrogenase, cyclcohydrolase, channeling, oxidoreductase,hydrolase; 2.56A {Escherichia coli K12} SCOP: c.2.1.7 c.58.1.2 | Back alignment and structure |
|---|
Probab=95.77 E-value=0.022 Score=48.24 Aligned_cols=78 Identities=18% Similarity=0.151 Sum_probs=58.3
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+++|.|++..+|.-+++++...|++|++..+.. . ++.+.+++ +|+++.++
T Consensus 157 l~gk~vvVIG~s~iVG~p~A~lL~~~gAtVtv~hs~t--------------------~-~L~~~~~~-----ADIVI~Av 210 (288)
T 1b0a_A 157 TFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFT--------------------K-NLRHHVEN-----ADLLIVAV 210 (288)
T ss_dssp CTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSC--------------------S-CHHHHHHH-----CSEEEECS
T ss_pred CCCCEEEEECCChHHHHHHHHHHHHCCCeEEEEeCCc--------------------h-hHHHHhcc-----CCEEEECC
Confidence 4788999999866789999999999999998875332 1 44455554 79999999
Q ss_pred ChhhHHHHHHhhhhCCEEEEEceec
Q 019332 231 GGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 231 g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|...+ ---+.++++..++.+|...
T Consensus 211 g~p~l-I~~~~vk~GavVIDVgi~r 234 (288)
T 1b0a_A 211 GKPGF-IPGDWIKEGAIVIDVGINR 234 (288)
T ss_dssp CCTTC-BCTTTSCTTCEEEECCCEE
T ss_pred CCcCc-CCHHHcCCCcEEEEccCCc
Confidence 98532 1223478888999998753
|
| >2o57_A Putative sarcosine dimethylglycine methyltransferase; structural genomics, protein structure initiative, PSI-2; 1.95A {Galdieria sulphuraria} SCOP: c.66.1.18 | Back alignment and structure |
|---|
Probab=95.76 E-value=0.042 Score=47.05 Aligned_cols=98 Identities=9% Similarity=-0.013 Sum_probs=66.8
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC---eeEecCCchhHHHHHHHHCCCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD---EAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
.+.++.+||-.|. |.|..+..+++..|++|++++.++...+.+++. .|.. .++..+-. ++ ....+.
T Consensus 79 ~~~~~~~vLDiGc--G~G~~~~~l~~~~~~~v~gvD~s~~~~~~a~~~~~~~~~~~~~~~~~~d~~-~~-----~~~~~~ 150 (297)
T 2o57_A 79 VLQRQAKGLDLGA--GYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYGSFL-EI-----PCEDNS 150 (297)
T ss_dssp CCCTTCEEEEETC--TTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEECCTT-SC-----SSCTTC
T ss_pred CCCCCCEEEEeCC--CCCHHHHHHHHHhCCEEEEEeCCHHHHHHHHHHHHhcCCCcceEEEEcCcc-cC-----CCCCCC
Confidence 7789999999984 578888889988899999999999877766532 2331 12211111 10 011236
Q ss_pred ccEEEeCCCh-------hhHHHHHHhhhhCCEEEEEcee
Q 019332 223 IDIYFENVGG-------KMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 223 ~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+|+|+....- ..+..+.++|+|+|+++.....
T Consensus 151 fD~v~~~~~l~~~~~~~~~l~~~~~~LkpgG~l~~~~~~ 189 (297)
T 2o57_A 151 YDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPM 189 (297)
T ss_dssp EEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred EeEEEecchhhhcCCHHHHHHHHHHHcCCCeEEEEEEec
Confidence 9999864331 3578889999999999877543
|
| >4fb5_A Probable oxidoreductase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, GFO/IDH/MOCA family; 2.61A {Rhizobium etli} | Back alignment and structure |
|---|
Probab=95.75 E-value=0.43 Score=42.33 Aligned_cols=88 Identities=11% Similarity=0.087 Sum_probs=58.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHH--------cCCEEEEEeC-ChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKL--------LGCYVVGSAG-SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~--------~ga~Vi~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
=+|.|+|+ |.+|..-+...+. -++++++++. ++++.+.+.+++|...+++ ++.+.+.+ ..+|
T Consensus 26 irvgiIG~-G~ig~~H~~a~~~~~~~~~~~~~~~lvav~d~~~~~a~~~a~~~g~~~~y~-----d~~ell~~---~~iD 96 (393)
T 4fb5_A 26 LGIGLIGT-GYMGKCHALAWNAVKTVFGDVERPRLVHLAEANAGLAEARAGEFGFEKATA-----DWRALIAD---PEVD 96 (393)
T ss_dssp CEEEEECC-SHHHHHHHHHHTTHHHHHCSSCCCEEEEEECC--TTHHHHHHHHTCSEEES-----CHHHHHHC---TTCC
T ss_pred ccEEEEcC-CHHHHHHHHHHHhhhhhhccCCCcEEEEEECCCHHHHHHHHHHhCCCeecC-----CHHHHhcC---CCCc
Confidence 47999996 9999754332221 2578887765 4556665555899866542 44444442 2699
Q ss_pred EEEeCCCh-hhHHHHHHhhhhCCEEEE
Q 019332 225 IYFENVGG-KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 225 ~vid~~g~-~~~~~~~~~l~~~G~~v~ 250 (342)
+|+-|... ...+.+..+|+.+-.+.+
T Consensus 97 aV~IatP~~~H~~~a~~al~aGkhVl~ 123 (393)
T 4fb5_A 97 VVSVTTPNQFHAEMAIAALEAGKHVWC 123 (393)
T ss_dssp EEEECSCGGGHHHHHHHHHHTTCEEEE
T ss_pred EEEECCChHHHHHHHHHHHhcCCeEEE
Confidence 99999988 678888888887666543
|
Homologous Structure Domains
Structure Domains Detected by RPS-BLAST
Original result of RPS-BLAST against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
E-value |
| 342 | ||||
| d1vj1a2 | 187 | c.2.1.1 (A:125-311) Putative zinc-binding alcohol | 4e-36 | |
| d1v3va2 | 182 | c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehyd | 1e-32 | |
| d1v3va1 | 147 | b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hyd | 7e-30 | |
| d1vj1a1 | 166 | b.35.1.2 (A:-1-124,A:312-351) Putative zinc-bindin | 1e-26 | |
| d1gu7a2 | 189 | c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yea | 2e-21 | |
| d1pqwa_ | 183 | c.2.1.1 (A:) Putative enoyl reductase domain of po | 3e-18 | |
| d1tt7a2 | 167 | c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bac | 2e-17 | |
| d1o89a2 | 177 | c.2.1.1 (A:116-292) Hypothetical protein YhdH {Esc | 3e-17 | |
| d1qora2 | 179 | c.2.1.1 (A:113-291) Quinone oxidoreductase {Escher | 8e-17 | |
| d2fzwa2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 5e-16 | |
| d2jhfa2 | 176 | c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse ( | 8e-16 | |
| d1f8fa2 | 174 | c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase { | 1e-15 | |
| d1xa0a2 | 176 | c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Ba | 2e-15 | |
| d1vj0a2 | 182 | c.2.1.1 (A:156-337) Hypothetical protein TM0436 {T | 4e-14 | |
| d1cdoa2 | 175 | c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Ga | 5e-14 | |
| d1yb5a2 | 174 | c.2.1.1 (A:121-294) Quinone oxidoreductase {Human | 1e-12 | |
| d1h2ba2 | 172 | c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeo | 5e-12 | |
| d1o8ca2 | 77 | c.2.1.1 (A:116-192) Hypothetical protein YhdH {Esc | 6e-11 | |
| d1p0fa2 | 174 | c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog | 5e-10 | |
| d1iz0a2 | 171 | c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus | 2e-08 | |
| d1jqba2 | 174 | c.2.1.1 (A:1140-1313) Bacterial secondary alcohol | 7e-08 | |
| d1kola2 | 195 | c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Ps | 1e-06 | |
| d1e3ia2 | 174 | c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse ( | 4e-06 | |
| d1gu7a1 | 175 | b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA redu | 1e-05 | |
| d1d1ta2 | 176 | c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human ( | 6e-05 |
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 187 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 127 bits (319), Expect = 4e-36
Identities = 58/186 (31%), Positives = 86/186 (46%), Gaps = 6/186 (3%)
Query: 126 LSYYTGILGMPGMTAYAGFYEVCSPKQG--ECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
LSY+ G +GMPG+T+ G E G + + +S A+GA G L GQ LLGC V
Sbjct: 2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVG 61
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
+ L +A + ++ E L+ P G+D+YF+NVGG + + V+ M
Sbjct: 62 ICGTQEKCLFLTSELGFDAAVNYKTGNVAEQLREACPGGVDVYFDNVGGDISNTVISQMN 121
Query: 244 IHGRIAVCGMISQYNLD----RPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIP 299
+ I +CG ISQYN D P + + E F V +Y + + +
Sbjct: 122 ENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITRERFTVLNYKDKFEPGILQLSQ 181
Query: 300 HIKEGK 305
KEGK
Sbjct: 182 WFKEGK 187
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 118 bits (295), Expect = 1e-32
Identities = 87/183 (47%), Positives = 116/183 (63%), Gaps = 3/183 (1%)
Query: 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
+PLS G +GMPG+TAY G EVC K GE V +SAA+GAVG +VGQ AKL GC VVG+
Sbjct: 1 LPLSLALGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGA 60
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
AGS +KI LK FNYK L EALK+ P+G D YF+NVGG+ L+ VL MK
Sbjct: 61 AGSDEKIAYLKQIGFDAA-FNYKTVNSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMK 119
Query: 244 IHGRIAVCGMISQYN-LDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMIIPHI 301
G+IA+CG IS YN +D+ + ++ K++R+EGF+V + + K L ++ +
Sbjct: 120 DFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQGDVREKALRDLMKWV 179
Query: 302 KEG 304
EG
Sbjct: 180 LEG 182
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} Length = 147 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Score = 109 bits (273), Expect = 7e-30
Identities = 40/160 (25%), Positives = 63/160 (39%), Gaps = 17/160 (10%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNI 63
MV+ K LK + G P ++D + + P + VLL+ L+LS DPYMR
Sbjct: 1 MVKAKSWTLKKHFQGKPTQSDFELKTVELP---PLKNGEVLLEALFLSVDPYMRIASKR- 56
Query: 64 KGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQH-- 121
K G + G VA+V++S+N F G +V +GW + + L K+
Sbjct: 57 -------LKEGAVMMGQQVARVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKLLTEW 109
Query: 122 -TDVPLSYYTGILGMPGMT-AYAGFYEVCSPKQGECVFIS 159
+ G M A+ G+ V +
Sbjct: 110 PDKKIQYHEHVTKGFENMPAAFIEMLNG--ANLGKAVVTA 147
|
| >d1vj1a1 b.35.1.2 (A:-1-124,A:312-351) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} Length = 166 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Score = 101 bits (253), Expect = 1e-26
Identities = 38/162 (23%), Positives = 62/162 (38%), Gaps = 8/162 (4%)
Query: 7 NKQVILKD--YVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK 64
++V+L +G P + + E L V ++ LYLS DPYMR +M
Sbjct: 5 IQRVVLNSRPGKNGNPVAENFRVEE--FSLLDALNEGQVQVRTLYLSVDPYMRCKMNEDT 62
Query: 65 G-SYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTG-WEEYSLVTAPQLFKIQ-- 120
G Y+ ++ G G+ V +S++ + KGD V W+ +++ L K+
Sbjct: 63 GTDYLAPWQLAQVADGGGIGIVEESKHQKLAKGDFVTSFYWPWQTKAILDGNGLEKVDPQ 122
Query: 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAAS 162
D T G+ M + V IS S
Sbjct: 123 LVDGLKVKETVAKGLENMGVAFQSMMTGGNVGKQIVCISEDS 164
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 189 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 88.5 bits (218), Expect = 2e-21
Identities = 32/186 (17%), Positives = 59/186 (31%), Gaps = 18/186 (9%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFI-SAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
+ + +TAY G+ FI + + AVG+ Q KLL + + +D
Sbjct: 9 ISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLD 68
Query: 192 LL---KNKFGFDEAFNYKEE-----PDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMK 243
+ + G + + + + + VGGK + +
Sbjct: 69 EVVASLKELGATQVITEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLN 128
Query: 244 IHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKF----LEMIIP 299
+G + G +S + + K GF V + + L II
Sbjct: 129 NNGLMLTYGGMSFQPVT-----IPTSLYIFKNFTSAGFWVTELLKNNKELKTSTLNQIIA 183
Query: 300 HIKEGK 305
+EGK
Sbjct: 184 WYEEGK 189
|
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} Length = 183 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Score = 78.9 bits (193), Expect = 3e-18
Identities = 36/174 (20%), Positives = 70/174 (40%), Gaps = 2/174 (1%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
G+ +TA+ EV GE V I +A+G VG AK+ + + D
Sbjct: 6 FGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKM-IGARIYTTAGSDAKRE 64
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
+ ++ G + + + +E L+ G+D+ ++ G+ + + + GR G
Sbjct: 65 MLSRLGVEYVGDSRSVDFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELG 124
Query: 253 MISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI 306
Y D G+ L + V ++ Y + L+ I+ H+ +GK+
Sbjct: 125 KKDVYA-DASLGLAALAKSASFSVVDLDLNLKLQPARYRQLLQHILQHVADGKL 177
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} Length = 167 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Score = 76.2 bits (186), Expect = 2e-17
Identities = 33/156 (21%), Positives = 60/156 (38%), Gaps = 11/156 (7%)
Query: 134 GMPGMTAYAGFY---EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI 190
G G TA + + + V ++ A+G VG + G VV S G+++
Sbjct: 2 GTAGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAA 61
Query: 191 DLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAV 250
D L + G E + ++ D LK + + VGGK L ++L ++ G +AV
Sbjct: 62 DYL-KQLGASEVISREDVYD--GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAV 118
Query: 251 CGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY 286
G+ + + + + V + G
Sbjct: 119 SGLTGGGEVP-----ATVYPFILRGVSLLGIDSVYC 149
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 177 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 76.1 bits (186), Expect = 3e-17
Identities = 42/188 (22%), Positives = 65/188 (34%), Gaps = 23/188 (12%)
Query: 132 ILGMPGMTAYAGFY---EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188
I+G G TA + Q + ++ ASG VG LG VV +G +
Sbjct: 8 IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67
Query: 189 KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRI 248
+ LK G E + K + + VG K+L VL M G +
Sbjct: 68 THEYLK-SLGASRVLPRDEFAESRPLEK----QVWAGAIDTVGDKVLAKVLAQMNYGGCV 122
Query: 249 AVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKIVY 308
A CG+ + L +M + + VR++G D P+ +
Sbjct: 123 AACGLAGGFTLP-----TTVMPFILRNVRLQGV---DSVMTPPERRAQAWQRL------- 167
Query: 309 VEDMAEGL 316
V D+ E
Sbjct: 168 VADLPESF 175
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} Length = 179 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Score = 75.1 bits (183), Expect = 8e-17
Identities = 37/173 (21%), Positives = 68/173 (39%), Gaps = 4/173 (2%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
+ G+T Y + K E AA+G VG + Q+AK LG ++G+ G+ K
Sbjct: 9 SFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQS 68
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
K G + NY+EE + + + + + +++VG + L ++ G + G
Sbjct: 69 AL-KAGAWQVINYREEDLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFG 127
Query: 253 MISQYNLDRPEGVHNLMY-LVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEG 304
S G+ N L R ++G++ + + I G
Sbjct: 128 NSSGAVTGVNLGILNQKGSLYVTRPSLQGYITTR--EELTEASNELFSLIASG 178
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 73.1 bits (178), Expect = 5e-16
Identities = 28/175 (16%), Positives = 49/175 (28%), Gaps = 7/175 (4%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
+LG T Y + G + G ++ ++G +KDK
Sbjct: 8 LLGCGISTGYGAAVNTAKLEPGSVCAVFGLGGVGLAVIMGCKVAGASRIIGVDINKDKFA 67
Query: 192 LLKNKFGFDEAFNYKEEP-DLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAV 250
K +FG E N ++ + E L G+D FE +G + L G
Sbjct: 68 RAK-EFGATECINPQDFSKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVS 126
Query: 251 CGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
++ + + + F PK + K
Sbjct: 127 V-VVGVAASGEEIATRPFQLVTGRTWKGTAFGGWKSVESVPKLVSE----YMSKK 176
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Score = 72.3 bits (176), Expect = 8e-16
Identities = 23/174 (13%), Positives = 48/174 (27%), Gaps = 5/174 (2%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
++G T Y +V QG + G ++ ++G +KDK
Sbjct: 8 LIGCGFSTGYGSAVKVAKVTQGSTCAVFGLGGVGLSVIMGCKAAGAARIIGVDINKDKFA 67
Query: 192 LLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVC 251
K + + + E L G+D FE +G L+
Sbjct: 68 KAKEVGATECVNPQDYKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSV 127
Query: 252 GMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
+ + + L+ +G + + + ++ K
Sbjct: 128 IV---GVPPDSQNLSMNPMLLLSGRTWKGAIFGGF--KSKDSVPKLVADFMAKK 176
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Score = 71.5 bits (174), Expect = 1e-15
Identities = 37/183 (20%), Positives = 64/183 (34%), Gaps = 10/183 (5%)
Query: 124 VPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGS 183
VP+ G LG T A GAVG AK+ G ++ +
Sbjct: 1 VPIEL-LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIA 58
Query: 184 AGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK-MLDAVLLNM 242
+ L + G N K + D A+K G++ E+ G +L + +
Sbjct: 59 VDIVESRLELAKQLGATHVINSKTQ-DPVAAIKEITDGGVNFALESTGSPEILKQGVDAL 117
Query: 243 KIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIK 302
I G+IAV G + ++ L+ + G + KF+ ++ +
Sbjct: 118 GILGKIAVVGAPQLGTTAQ----FDVNDLLLGGKTILGVVEGSGS--PKKFIPELVRLYQ 171
Query: 303 EGK 305
+GK
Sbjct: 172 QGK 174
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Score = 71.0 bits (173), Expect = 2e-15
Identities = 32/152 (21%), Positives = 54/152 (35%), Gaps = 11/152 (7%)
Query: 132 ILGMPGMTAYAGFY---EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188
+G G TA + E + V ++ A+G VG L G V S G
Sbjct: 8 AIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAA 67
Query: 189 KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRI 248
+ D L+ E + E ++ + + VGG+ L VL M+ G +
Sbjct: 68 EHDYLRVLGAK---EVLAREDVMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAV 124
Query: 249 AVCGMISQYNLDRPEGVHNLMYLVTKRVRMEG 280
AV G+ + + + + V + G
Sbjct: 125 AVSGLTGGAEVP-----TTVHPFILRGVSLLG 151
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} Length = 182 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Score = 67.7 bits (164), Expect = 4e-14
Identities = 39/175 (22%), Positives = 58/175 (33%), Gaps = 9/175 (5%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
+ G TAY F E G+ V I A G +G A+ LG V
Sbjct: 8 MAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRL 66
Query: 192 LLKNKFGFDEAFNYKE---EPDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGR 247
L + G D N +E E + G D E G + L ++ G
Sbjct: 67 KLAEEIGADLTLNRRETSVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGF 126
Query: 248 IAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIK 302
+V G+ P +LV K +G V D H + K + + + +
Sbjct: 127 YSVAGVAVP---QDPVPFKVYEWLVLKNATFKGIWVSDTSH-FVKTVSITSRNYQ 177
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} Length = 175 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Score = 67.4 bits (163), Expect = 5e-14
Identities = 23/175 (13%), Positives = 49/175 (28%), Gaps = 8/175 (4%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
+LG T + + G + V ++ + DK +
Sbjct: 8 LLGCGVSTGFGAAVNTAKVEPGSTCAVFGLGAVGLAAVMGCHSAGAKRIIAVDLNPDKFE 67
Query: 192 LLKNKFGFDEAFNYKEEPDL-NEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAV 250
K FG + N + + ++ L + G+D E VG + L + G
Sbjct: 68 KAK-VFGATDFVNPNDHSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVS 126
Query: 251 CGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
+ D L+ +G + + + ++ + K
Sbjct: 127 VLVGWTDLHDVATRPIQLI----AGRTWKGSMFGGFK--GKDGVPKMVKAYLDKK 175
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Score = 63.5 bits (153), Expect = 1e-12
Identities = 41/173 (23%), Positives = 72/173 (41%), Gaps = 9/173 (5%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
+G+P TAY K GE V + ASG VG Q A+ G ++G+AG+++ +
Sbjct: 9 IGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKI 68
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
+ G E FN++E +++ K +GIDI E + L L + GR+ V G
Sbjct: 69 -VLQNGAHEVFNHREVNYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVG 127
Query: 253 MISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY-HLYPKFLEMIIPHIKEG 304
+ N + K + G + + ++ + ++ G
Sbjct: 128 SRGTIEI-------NPRDTMAKESSIIGVTLFSSTKEEFQQYAAALQAGMEIG 173
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} Length = 172 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Score = 61.5 bits (148), Expect = 5e-12
Identities = 30/174 (17%), Positives = 65/174 (37%), Gaps = 14/174 (8%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
L G+TAY + G +G + Q K++ V + K++
Sbjct: 12 LADAGITAYRAVKKAARTLYPGAYVAIVGVGGLGHIAVQLLKVMTPATVIALDVKEEKLK 71
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNM-KIHGRIAVC 251
L + G D + + +P + + ++ G+++ + VG + + GR+ +
Sbjct: 72 LAERLGADHVVDARRDP-VKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIV 130
Query: 252 GMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
G + + +++ V EG LV +Y L + + + +GK
Sbjct: 131 GYGGELR-------FPTIRVISSEVSFEGSLVGNYVEL-HELVTL----ALQGK 172
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} Length = 77 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Score = 55.7 bits (134), Expect = 6e-11
Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 3/67 (4%)
Query: 132 ILGMPGMTAYAGFYEV---CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188
I+G G TA + Q + ++ ASG VG LG VV +G +
Sbjct: 8 IIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRES 67
Query: 189 KIDLLKN 195
+ LK+
Sbjct: 68 THEYLKS 74
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Score = 55.6 bits (133), Expect = 5e-10
Identities = 28/177 (15%), Positives = 53/177 (29%), Gaps = 12/177 (6%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
++G T Y G + G VG K G + G+
Sbjct: 7 LIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKF 65
Query: 192 LLKNKFGFDEAFNYKEEPD-LNEALKRYFPEGIDIYFENVGGK--MLDAVLLNMKIHGRI 248
+ G E N K+ + E + G+D E G M++A+ G
Sbjct: 66 PKAIELGATECLNPKDYDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVT 125
Query: 249 AVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
V G+ E + L+ ++G + + + + ++ + K
Sbjct: 126 VVLGL-----ASPNERLPLDPLLLLTGRSLKGSVFGGF---KGEEVSRLVDDYMKKK 174
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} Length = 171 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Score = 50.8 bits (120), Expect = 2e-08
Identities = 34/175 (19%), Positives = 63/175 (36%), Gaps = 16/175 (9%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
+ +TAY + + GE V + AA+GA+G Q A+ +G V+ +A +K+ L
Sbjct: 9 FPVSFLTAYLAL-KRAQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLAL 67
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCG 252
+ A + R G V GK ++ L + GR+ G
Sbjct: 68 PLALGAEEAATYAEVPE-------RAKAWGGLDLVLEVRGKEVEESLGLLAHGGRLVYIG 120
Query: 253 MISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH---LYPKFLEMIIPHIKEG 304
+ L+ + + + GF + L + L ++P +
Sbjct: 121 AAEGEVAP-----IPPLRLMRRNLAVLGFWLTPLLREGALVEEALGFLLPRLGRE 170
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Score = 49.5 bits (117), Expect = 7e-08
Identities = 29/174 (16%), Positives = 54/174 (31%), Gaps = 9/174 (5%)
Query: 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDL 192
+ T + G E+ + G V + VG + AKL G + GS+
Sbjct: 9 ITDMMTTGFHGA-ELADIEMGSSVVVIGIGA-VGLMGIAGAKLRGAGRIIGVGSRPICVE 66
Query: 193 LKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM-LDAVLLNMKIHGRIAVC 251
+G + NYK ++ +K +G+D GG L + +K G I+
Sbjct: 67 AAKFYGATDILNYKNGHIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNI 126
Query: 252 GMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
+ V + K ++ E + + +
Sbjct: 127 NYHGSGDALLIPRVEWGCGMAHKTIKGGLCPGGRL------RAERLRDMVVYNR 174
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} Length = 195 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Score = 46.0 bits (108), Expect = 1e-06
Identities = 31/192 (16%), Positives = 57/192 (29%), Gaps = 30/192 (15%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
L T Y G G V+++ A G VG A+LLG VV
Sbjct: 6 CLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARL 63
Query: 192 LLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG----------------KML 235
GF+ A + P + +D + VG +L
Sbjct: 64 AHAKAQGFEIADLSLDTPLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVL 123
Query: 236 DAVLLNMKIHGRIAVCGMISQYNLDRPEGVHN---------LMYLVTKRVRMEGFLVRDY 286
++++ ++ G+I + G+ + + L + + V Y
Sbjct: 124 NSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSLSIRFGLGWAKSHSFHTGQTPVMKY 183
Query: 287 YHLYPKFLEMII 298
++ I+
Sbjct: 184 ---NRALMQAIM 192
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} Length = 174 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Score = 44.2 bits (103), Expect = 4e-06
Identities = 21/175 (12%), Positives = 48/175 (27%), Gaps = 9/175 (5%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
++G + Y G + G VG K+ G + + +
Sbjct: 8 LIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKF 66
Query: 192 LLKNKFGFDEAFNYKEEPD-LNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAV 250
G + N +E + + + G+D + G ++ + G +
Sbjct: 67 PKAKALGATDCLNPRELDKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSC 126
Query: 251 CGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305
+ ++ + V ++ G+ D P + K K
Sbjct: 127 TVVGAKVDEMTIPTVDVILGRSINGTFFGGWKSVDS---VPNLVSD----YKNKK 174
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} Length = 175 | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Score = 43.2 bits (100), Expect = 1e-05
Identities = 20/180 (11%), Positives = 45/180 (25%), Gaps = 16/180 (8%)
Query: 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPK-GSNGVLLKNLYLSCDPYMR----- 57
M+ + V+ + G PK+ + S E+ N V++K L +P
Sbjct: 1 MITAQAVLYTQH--GEPKDV---LFTQSFEIDDDNLAPNEVIVKTLGSPVNPSDINQIQG 55
Query: 58 --PRMTNIKGSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQ 115
P + + + + N + + + T
Sbjct: 56 VYPSKPAKTTGFGTTEPAAPCGNEGLFEVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHAL 115
Query: 116 LFKIQHTDVPLSYY--TGILGMPGMTAYAGFYEVCSPKQGECVFIS-AASGAVGQLVGQF 172
+P A + K ++ A+ G+ + +
Sbjct: 116 GNDDDFIKLPNPAQSKANGKPNGLTDAKSIETLYDGTKPLHELYQDGVANSKDGKQLITY 175
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} Length = 176 | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Score = 41.0 bits (95), Expect = 6e-05
Identities = 28/170 (16%), Positives = 47/170 (27%), Gaps = 11/170 (6%)
Query: 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191
++G T Y + K G + G VG V K G +
Sbjct: 9 LIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKF 67
Query: 192 LLKNKFGFDEAFNYKEEPDLNE-ALKRYFPEGIDIYFENVGGK--MLDAVLLNMKIHGRI 248
G E + K+ L + FE +G M+DA+ +G
Sbjct: 68 EKAMAVGATECISPKDSTKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTS 127
Query: 249 AVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHL--YPKFLEM 296
V G+ + + L+ +G + PK +
Sbjct: 128 VVVGVPPSA-----KMLTYDPMLLFTGRTWKGCVFGGLKSRDDVPKLVTE 172
|
Homologous Domains Detected by HHsearch
Original result of HHsearch against SCOP70(version1.75) database
| ID | Alignment Graph | Length |
Definition |
Probability |
| Query | 342 | |||
| d1pqwa_ | 183 | Putative enoyl reductase domain of polyketide synt | 99.97 | |
| d1v3va2 | 182 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.97 | |
| d1yb5a2 | 174 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1qora2 | 179 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.96 | |
| d1yb5a1 | 150 | Quinone oxidoreductase {Human (Homo sapiens) [TaxI | 99.96 | |
| d1vj1a2 | 187 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.96 | |
| d1xa0a2 | 176 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.95 | |
| d1f8fa2 | 174 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.95 | |
| d1qora1 | 147 | Quinone oxidoreductase {Escherichia coli [TaxId: 5 | 99.95 | |
| d1llua1 | 175 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.95 | |
| d1cdoa1 | 199 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.94 | |
| d1piwa1 | 192 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.94 | |
| d2fzwa1 | 197 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.94 | |
| d1xa0a1 | 152 | B. subtilis YhfP homologue {Bacillus stearothermop | 99.94 | |
| d1gu7a2 | 189 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.94 | |
| d1e3ja1 | 178 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.94 | |
| d1jvba2 | 170 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.94 | |
| d1iz0a2 | 171 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.94 | |
| d1gu7a1 | 175 | 2,4-dienoyl-CoA reductase {Yeast (Candida tropical | 99.94 | |
| d1h2ba1 | 171 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.94 | |
| d1vj0a2 | 182 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.93 | |
| d1llua2 | 166 | Alcohol dehydrogenase {Pseudomonas aeruginosa [Tax | 99.93 | |
| d1h2ba2 | 172 | Alcohol dehydrogenase {Archaeon Aeropyrum pernix [ | 99.93 | |
| d1rjwa1 | 171 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.93 | |
| d1rjwa2 | 168 | Alcohol dehydrogenase {Bacillus stearothermophilus | 99.93 | |
| d1jqba2 | 174 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.93 | |
| d1e3ia1 | 202 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.93 | |
| d1iz0a1 | 131 | Quinone oxidoreductase {Thermus thermophilus [TaxI | 99.93 | |
| d1f8fa1 | 194 | Benzyl alcohol dehydrogenase {Acinetobacter calcoa | 99.93 | |
| d1vj0a1 | 184 | Hypothetical protein TM0436 {Thermotoga maritima [ | 99.93 | |
| d1p0fa2 | 174 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.92 | |
| d2fzwa2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.92 | |
| d1e3ia2 | 174 | Alcohol dehydrogenase {Mouse (Mus musculus), class | 99.92 | |
| d1uufa2 | 168 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.92 | |
| d1piwa2 | 168 | Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeas | 99.92 | |
| d1e3ja2 | 170 | Ketose reductase (sorbitol dehydrogenase) {Silverl | 99.91 | |
| d1pl8a2 | 171 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.91 | |
| d1jvba1 | 177 | Alcohol dehydrogenase {Archaeon Sulfolobus solfata | 99.91 | |
| d1tt7a2 | 167 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.91 | |
| d1pl8a1 | 185 | Ketose reductase (sorbitol dehydrogenase) {Human ( | 99.91 | |
| d1o89a2 | 177 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.91 | |
| d2jhfa2 | 176 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.91 | |
| d1d1ta2 | 176 | Alcohol dehydrogenase {Human (Homo sapiens), diffe | 99.9 | |
| d1cdoa2 | 175 | Alcohol dehydrogenase {Cod (Gadus callarias) [TaxI | 99.9 | |
| d1kola1 | 201 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.9 | |
| d1kola2 | 195 | Formaldehyde dehydrogenase {Pseudomonas putida [Ta | 99.9 | |
| d1o89a1 | 146 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.89 | |
| d1tt7a1 | 162 | Hypothetical protein YhfP {Bacillus subtilis [TaxI | 99.89 | |
| d2jhfa1 | 198 | Alcohol dehydrogenase {Horse (Equus caballus) [Tax | 99.89 | |
| d1uufa1 | 179 | Hypothetical protein YahK {Escherichia coli [TaxId | 99.88 | |
| d1p0fa1 | 198 | Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: | 99.88 | |
| d1vj1a1 | 166 | Putative zinc-binding alcohol dehydrogenase {Mouse | 99.88 | |
| d1jqba1 | 177 | Bacterial secondary alcohol dehydrogenase {Clostri | 99.86 | |
| d1v3va1 | 147 | Leukotriene b4 12-hydroxydehydrogenase/prostagland | 99.84 | |
| d1o8ca2 | 77 | Hypothetical protein YhdH {Escherichia coli [TaxId | 99.59 | |
| d1q7ba_ | 243 | beta-keto acyl carrier protein reductase {Escheric | 98.42 | |
| d1hdca_ | 254 | 3-alpha,20-beta-hydroxysteroid dehydrogenase {Stre | 98.3 | |
| d2d1ya1 | 248 | Hypothetical protein TTHA0369 {Thermus thermophilu | 98.3 | |
| d1hxha_ | 253 | 3beta/17beta hydroxysteroid dehydrogenase {Comamon | 98.3 | |
| d1ulsa_ | 242 | beta-keto acyl carrier protein reductase {Thermus | 98.22 | |
| d1yb1a_ | 244 | 17-beta-hydroxysteroid dehydrogenase type XI {Huma | 98.2 | |
| d1pr9a_ | 244 | Carbonyl reductase {Human (Homo sapiens) [TaxId: 9 | 98.19 | |
| d1zema1 | 260 | Xylitol dehydrogenase {Gluconobacter oxydans [TaxI | 98.19 | |
| d1xq1a_ | 259 | Tropinone reductase {Thale cress (Arabidopsis thal | 98.18 | |
| d2gdza1 | 254 | 15-hydroxyprostaglandin dehydrogenase, PGDH {Human | 98.16 | |
| d1pjca1 | 168 | L-alanine dehydrogenase {Phormidium lapideum [TaxI | 98.15 | |
| d1vl8a_ | 251 | Gluconate 5-dehydrogenase {Thermotoga maritima [Ta | 98.15 | |
| d1nffa_ | 244 | Putative oxidoreductase Rv2002 {Mycobacterium tube | 98.13 | |
| d1cyda_ | 242 | Carbonyl reductase {Mouse (Mus musculus) [TaxId: 1 | 98.13 | |
| d1xg5a_ | 257 | Putative dehydrogenase ARPG836 (MGC4172) {Human (H | 98.13 | |
| d1k2wa_ | 256 | Sorbitol dehydrogenase {Rhodobacter sphaeroides [T | 98.11 | |
| d1luaa1 | 191 | Methylene-tetrahydromethanopterin dehydrogenase {M | 98.11 | |
| d1wmaa1 | 275 | Carbonyl reductase/20beta-hydroxysteroid dehydroge | 98.1 | |
| d1ydea1 | 250 | Retinal dehydrogenase/reductase 3 {Human (Homo sap | 98.1 | |
| d2c07a1 | 251 | beta-keto acyl carrier protein reductase {Malaria | 98.09 | |
| d1bdba_ | 276 | Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Ps | 98.09 | |
| d2bgka1 | 268 | Rhizome secoisolariciresinol dehydrogenase {Mayapp | 98.03 | |
| d1ae1a_ | 258 | Tropinone reductase {Jimsonweed (Datura stramonium | 98.02 | |
| d2ag5a1 | 245 | Dehydrogenase/reductase SDR family member 6, DHRS6 | 98.02 | |
| d1zk4a1 | 251 | R-specific alcohol dehydrogenase {Lactobacillus br | 98.0 | |
| d1dhra_ | 236 | Dihydropteridin reductase (pteridine reductase) {R | 97.99 | |
| d2a4ka1 | 241 | beta-keto acyl carrier protein reductase {Thermus | 97.99 | |
| d2ae2a_ | 259 | Tropinone reductase {Jimsonweed (Datura stramonium | 97.96 | |
| d1xu9a_ | 269 | 11-beta-hydroxysteroid dehydrogenase 1 {Human (Hom | 97.96 | |
| d1x1ta1 | 260 | D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas | 97.92 | |
| d1xkqa_ | 272 | Hypothetical protein R05D8.7 {Caenorhabditis elega | 97.91 | |
| d1zmta1 | 252 | Halohydrin dehalogenase HheC {Agrobacterium tumefa | 97.89 | |
| d1ja9a_ | 259 | 1,3,6,8-tetrahydroxynaphthalene reductase {Rice bl | 97.88 | |
| d1g0oa_ | 272 | 1,3,8-trihydroxynaphtalene reductase (THNR, naphto | 97.88 | |
| d1fmca_ | 255 | 7-alpha-hydroxysteroid dehydrogenase {Escherichia | 97.87 | |
| d1iy8a_ | 258 | Levodione reductase {Corynebacterium aquaticum [Ta | 97.87 | |
| d1gz6a_ | 302 | (3R)-hydroxyacyl-CoA dehydrogenase domain of estra | 97.86 | |
| d1ooea_ | 235 | Dihydropteridin reductase (pteridine reductase) {N | 97.86 | |
| d1l7da1 | 183 | Nicotinamide nucleotide transhydrogenase dI compon | 97.85 | |
| d1xhla_ | 274 | Hypothetical protein F25D1.5 {Caenorhabditis elega | 97.83 | |
| d1spxa_ | 264 | Glucose dehydrogenase (5l265) {Nematode (Caenorhab | 97.83 | |
| d1yxma1 | 297 | Peroxisomal trans 2-enoyl CoA reductase {Human (Ho | 97.82 | |
| d1gpja2 | 159 | Glutamyl tRNA-reductase middle domain {Archaeon Me | 97.82 | |
| d1jg1a_ | 215 | Protein-L-isoaspartyl O-methyltransferase {Archaeo | 97.82 | |
| d1yo6a1 | 250 | Putative carbonyl reductase sniffer {Caenorhabditi | 97.82 | |
| d1o54a_ | 266 | Hypothetical protein TM0748 {Thermotoga maritima [ | 97.81 | |
| d1h5qa_ | 260 | Mannitol dehydrogenase {Mushroom (Agaricus bisporu | 97.8 | |
| d2rhca1 | 257 | beta-keto acyl carrier protein reductase {Streptom | 97.8 | |
| d1o5ia_ | 234 | beta-keto acyl carrier protein reductase {Thermoto | 97.77 | |
| d1w6ua_ | 294 | 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {H | 97.76 | |
| d1geea_ | 261 | Glucose dehydrogenase {Bacillus megaterium [TaxId: | 97.73 | |
| d1edoa_ | 244 | beta-keto acyl carrier protein reductase {Oil seed | 97.72 | |
| d2ew8a1 | 247 | (s)-1-phenylethanol dehydrogenase {Azoarcus sp. eb | 97.7 | |
| d2bd0a1 | 240 | Bacterial sepiapterin reductase {Chlorobium tepidu | 97.7 | |
| d1vbfa_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Sulfolo | 97.67 | |
| d1gega_ | 255 | meso-2,3-butanediol dehydrogenase {Klebsiella pneu | 97.65 | |
| d1sbya1 | 254 | Drosophila alcohol dehydrogenase {Fly (Drosophila | 97.6 | |
| d1dl5a1 | 213 | Protein-L-isoaspartyl O-methyltransferase {Thermot | 97.57 | |
| d1npya1 | 167 | Shikimate 5-dehydrogenase-like protein HI0607 {Hae | 97.57 | |
| d1uzma1 | 237 | beta-keto acyl carrier protein reductase {Mycobact | 97.5 | |
| d1kpia_ | 291 | CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.47 | |
| d1jtva_ | 285 | Human estrogenic 17beta-hydroxysteroid dehydrogena | 97.46 | |
| d1nyta1 | 170 | Shikimate 5-dehydrogenase AroE {Escherichia coli [ | 97.46 | |
| d2o23a1 | 248 | Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Ho | 97.42 | |
| d2fr1a1 | 259 | Erythromycin synthase, eryAI, 1st ketoreductase mo | 97.41 | |
| d1snya_ | 248 | Carbonyl reductase sniffer {Fruit fly (Drosophila | 97.4 | |
| d1kpga_ | 285 | CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | 97.36 | |
| d1yb2a1 | 250 | Hypothetical protein Ta0852 {Thermoplasma acidophi | 97.35 | |
| d1ulua_ | 256 | Enoyl-ACP reductase {Thermus thermophilus [TaxId: | 97.34 | |
| d1hdoa_ | 205 | Biliverdin IX beta reductase {Human (Homo sapiens) | 97.3 | |
| d1r18a_ | 223 | Protein-L-isoaspartyl O-methyltransferase {Fruit f | 97.21 | |
| d1i1na_ | 224 | Protein-L-isoaspartyl O-methyltransferase {Human ( | 97.2 | |
| d1e5qa1 | 182 | Saccharopine reductase {Rice blast fungus (Magnapo | 97.19 | |
| d2fk8a1 | 280 | Methoxy mycolic acid synthase 4, Mma4 {Mycobacteri | 97.13 | |
| d2pd4a1 | 274 | Enoyl-ACP reductase {Helicobacter pylori [TaxId: 2 | 97.12 | |
| d1nkva_ | 245 | Hypothetical Protein YjhP {Escherichia coli [TaxId | 97.11 | |
| d1vi2a1 | 182 | Putative shikimate dehydrogenase YdiB {Escherichia | 96.99 | |
| d1mxha_ | 266 | Dihydropteridin reductase (pteridine reductase) {T | 96.98 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 96.97 | |
| d1oaaa_ | 259 | Sepiapterin reductase {Mouse (Mus musculus) [TaxId | 96.94 | |
| d2h7ma1 | 268 | Enoyl-ACP reductase {Mycobacterium tuberculosis, T | 96.9 | |
| d1pjqa1 | 113 | Siroheme synthase CysG, domain 1 {Salmonella typhi | 96.88 | |
| d1susa1 | 227 | Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicag | 96.87 | |
| d1bg6a2 | 184 | N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {A | 96.84 | |
| d1qsga_ | 258 | Enoyl-ACP reductase {Escherichia coli [TaxId: 562] | 96.84 | |
| d2b25a1 | 324 | Hypothetical protein FLJ20628 {Human (Homo sapiens | 96.82 | |
| d1l3ia_ | 186 | Precorrin-6Y methyltransferase (CbiT) {Archaeon Me | 96.77 | |
| d1pjza_ | 201 | Thiopurine S-methyltransferase {Pseudomonas syring | 96.72 | |
| d1r0ka2 | 150 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Z | 96.71 | |
| d2o57a1 | 282 | Putative sarcosine dimethylglycine methyltransfera | 96.69 | |
| d1p77a1 | 171 | Shikimate 5-dehydrogenase AroE {Haemophilus influe | 96.69 | |
| d1zx0a1 | 229 | Guanidinoacetate methyltransferase {Human (Homo sa | 96.67 | |
| d2q46a1 | 252 | Hypothetical protein At5g02240 (T7H20_290) {Thale | 96.65 | |
| d1xxla_ | 234 | Hypothetical protein YcgJ {Bacillus subtilis [TaxI | 96.63 | |
| d1i9ga_ | 264 | Probable methyltransferase Rv2118c {Mycobacterium | 96.62 | |
| d2avna1 | 246 | Hypothetical methyltransferase TM1389 {Thermotoga | 96.59 | |
| d1li4a1 | 163 | S-adenosylhomocystein hydrolase {Human (Homo sapie | 96.54 | |
| d1q0qa2 | 151 | 1-deoxy-D-xylulose-5-phosphate reductoisomerase {E | 96.49 | |
| d2nxca1 | 254 | PrmA-like protein TTHA0656 (TT0836) {Thermus therm | 96.48 | |
| d2jfga1 | 93 | UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase | 96.46 | |
| d2f1ka2 | 165 | Prephenate dehydrogenase TyrA {Synechocystis sp. p | 96.43 | |
| d1e7wa_ | 284 | Dihydropteridin reductase (pteridine reductase) {L | 96.42 | |
| d1d7oa_ | 297 | Enoyl-ACP reductase {Oil seed rape (Brassica napus | 96.41 | |
| d1vl5a_ | 231 | Hypothetical protein BH2331 {Bacillus halodurans [ | 96.36 | |
| d1yqga2 | 152 | Pyrroline-5-carboxylate reductase ProC {Neisseria | 96.35 | |
| d1y1pa1 | 342 | Aldehyde reductase II {Sporobolomyces salmonicolor | 96.28 | |
| d2ahra2 | 152 | Pyrroline-5-carboxylate reductase ProC {Streptococ | 96.25 | |
| d1rkxa_ | 356 | CDP-glucose-4,6-dehydratase {Yersinia pseudotuberc | 96.24 | |
| d1orra_ | 338 | CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: | 96.09 | |
| d1uaya_ | 241 | Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus t | 96.08 | |
| d1uh5a_ | 329 | Enoyl-ACP reductase {Malaria parasite (Plasmodium | 96.03 | |
| d2bzga1 | 229 | Thiopurine S-methyltransferase {Human (Homo sapien | 95.99 | |
| d1i24a_ | 393 | Sulfolipid biosynthesis protein SQD1 {Thale cress | 95.99 | |
| d1u2za_ | 406 | Catalytic, N-terminal domain of histone methyltran | 95.98 | |
| d1ygya1 | 184 | Phosphoglycerate dehydrogenase {Mycobacterium tube | 95.9 | |
| d1ydwa1 | 184 | Probable oxidoreductase At4g09670 {Thale cress (Ar | 95.85 | |
| d1jaya_ | 212 | Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archae | 95.83 | |
| d2avda1 | 219 | COMT domain-containing protein 1, COMTD1 {Human (H | 95.75 | |
| d2czca2 | 172 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 95.69 | |
| d1udca_ | 338 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 95.68 | |
| d1nw3a_ | 328 | Catalytic, N-terminal domain of histone methyltran | 95.61 | |
| d1db3a_ | 357 | GDP-mannose 4,6-dehydratase {Escherichia coli [Tax | 95.59 | |
| d1j4aa1 | 197 | D-lactate dehydrogenase {Lactobacillus helveticus | 95.55 | |
| d2bkaa1 | 232 | TAT-interacting protein TIP30 {Human (Homo sapiens | 95.53 | |
| d1n7ha_ | 339 | GDP-mannose 4,6-dehydratase {Thale-cress (Arabidop | 95.44 | |
| d1vl0a_ | 281 | DTDP-4-dehydrorhamnose reductase RfbD {Clostridium | 95.39 | |
| d1fjha_ | 257 | 3-alpha-hydroxysteroid dehydrogenase {Comamonas te | 95.39 | |
| d1nvmb1 | 157 | Acetaldehyde dehydrogenase (acylating) {Pseudomona | 95.39 | |
| d2frna1 | 260 | Hypothetical protein PH0793 {Pyrococcus horikoshii | 95.38 | |
| d2hmva1 | 134 | Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | 95.38 | |
| d1vpda2 | 161 | Hydroxyisobutyrate dehydrogenase {Salmonella typhi | 95.3 | |
| d1yl7a1 | 135 | Dihydrodipicolinate reductase {Mycobacterium tuber | 95.24 | |
| d1ve3a1 | 226 | Hypothetical protein PH0226 {Archaeon Pyrococcus h | 95.22 | |
| d1mx3a1 | 193 | Transcription corepressor CtbP {Human (Homo sapien | 95.18 | |
| d1v8ba1 | 163 | S-adenosylhomocystein hydrolase {Plasmodium falcip | 95.14 | |
| d2b69a1 | 312 | UDP-glucuronate decarboxylase 1 {Human (Homo sapie | 95.08 | |
| d2g5ca2 | 171 | Prephenate dehydrogenase TyrA {Aquifex aeolicus [T | 95.04 | |
| d1c1da1 | 201 | Phenylalanine dehydrogenase {Rhodococcus sp., M4 [ | 94.98 | |
| d1wdka3 | 186 | Fatty oxidation complex alpha subunit, middle doma | 94.98 | |
| d1g8aa_ | 227 | Fibrillarin homologue {Archaeon Pyrococcus horikos | 94.95 | |
| d1qyda_ | 312 | Pinoresinol-lariciresinol reductase {Giant arborvi | 94.9 | |
| d2as0a2 | 324 | Hypothetical protein PH1915, middle and C-terminal | 94.88 | |
| d2pv7a2 | 152 | Prephenate dehydrogenase TyrA {Haemophilus influen | 94.84 | |
| d1rpna_ | 321 | GDP-mannose 4,6-dehydratase {Pseudomonas aeruginos | 94.79 | |
| d2c5aa1 | 363 | GDP-mannose-3', 5'-epimerase {Thale cress (Arabido | 94.78 | |
| d1nt2a_ | 209 | Fibrillarin homologue {Archaeon Archaeoglobus fulg | 94.75 | |
| d1ks9a2 | 167 | Ketopantoate reductase PanE {Escherichia coli [Tax | 94.73 | |
| d1wzna1 | 251 | Hypothetical methyltransferase PH1305 {Archaeon Py | 94.71 | |
| d1gdha1 | 191 | D-glycerate dehydrogenase {Hyphomicrobium methylov | 94.68 | |
| d1onfa2 | 117 | Glutathione reductase {Plasmodium falciparum [TaxI | 94.67 | |
| d1xgka_ | 350 | Negative transcriptional regulator NmrA {Aspergill | 94.64 | |
| d1b7go1 | 178 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.63 | |
| d1cf2o1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 94.61 | |
| d1n1ea2 | 189 | Glycerol-3- phosphate dehydrogenase {Trypanosome ( | 94.58 | |
| d1vm6a3 | 128 | Dihydrodipicolinate reductase {Thermotoga maritima | 94.53 | |
| d1g8sa_ | 230 | Fibrillarin homologue {Archaeon Methanococcus jann | 94.43 | |
| d1p91a_ | 268 | rRNA methyltransferase RlmA {Escherichia coli [Tax | 94.39 | |
| d2a35a1 | 212 | Hypothetical protein PA4017 {Pseudomonas aeruginos | 94.38 | |
| d1nvta1 | 177 | Shikimate 5-dehydrogenase AroE {Archaeon Methanoco | 94.33 | |
| d1zh8a1 | 181 | Hypothetical protein TM0312 {Thermotoga maritima [ | 94.27 | |
| d1j5pa4 | 132 | Hypothetical protein TM1643 {Thermotoga maritima [ | 94.23 | |
| d2gz1a1 | 154 | Aspartate beta-semialdehyde dehydrogenase {Strepto | 94.18 | |
| d2naca1 | 188 | Formate dehydrogenase {Pseudomonas sp., strain 101 | 94.18 | |
| d3cuma2 | 162 | Hydroxyisobutyrate dehydrogenase {Pseudomonas aeru | 94.17 | |
| d1qp8a1 | 181 | Putative formate dehydrogenase {Archaeon Pyrobacul | 94.16 | |
| d1leha1 | 230 | Leucine dehydrogenase {Bacillus sphaericus [TaxId: | 94.07 | |
| d1mlda1 | 144 | Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 982 | 94.06 | |
| d1xvaa_ | 292 | Glycine N-methyltransferase {Rat (Rattus norvegicu | 94.05 | |
| d1z45a2 | 347 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 94.01 | |
| d1dxya1 | 199 | D-2-hydroxyisocaproate dehydrogenase {Lactobacillu | 93.99 | |
| d1dusa_ | 194 | Hypothetical protein MJ0882 {Archaeon Methanococcu | 93.99 | |
| d2blla1 | 342 | Polymyxin resistance protein ArnA (PrmI) {Escheric | 93.94 | |
| d1xtpa_ | 254 | Hypothetical protein Lmaj004091aaa (LmjF30.0810) { | 93.72 | |
| d1p3da1 | 96 | UDP-N-acetylmuramate-alanine ligase MurC {Haemophi | 93.72 | |
| d1kjqa2 | 111 | Glycinamide ribonucleotide transformylase PurT, N- | 93.62 | |
| d1mo9a2 | 121 | NADH-dependent 2-ketopropyl coenzyme M oxidoreduct | 93.51 | |
| d1h6da1 | 221 | Glucose-fructose oxidoreductase, N-terminal domain | 93.42 | |
| d1h6va2 | 122 | Mammalian thioredoxin reductase {Rat (Rattus norve | 93.29 | |
| d1xj5a_ | 290 | Spermidine synthase {Thale cress (Arabidopsis thal | 93.25 | |
| d2cl5a1 | 214 | Catechol O-methyltransferase, COMT {Rat (Rattus no | 93.25 | |
| d1im8a_ | 225 | Hypothetical protein HI0319 (YecO) {Haemophilus in | 93.18 | |
| d2i6ga1 | 198 | Putative methyltransferase TehB {Salmonella typhim | 93.13 | |
| d1b26a1 | 234 | Glutamate dehydrogenase {Thermotoga maritima [TaxI | 93.11 | |
| d1xeaa1 | 167 | Putative oxidoreductase VCA1048 {Vibrio cholerae [ | 93.09 | |
| d2bhsa1 | 292 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 92.98 | |
| d2b2ca1 | 312 | Spermidine synthase {Caenorhabditis elegans [TaxId | 92.87 | |
| d1txga2 | 180 | Glycerol-3- phosphate dehydrogenase {Archaeoglobus | 92.81 | |
| d1t4ba1 | 146 | Aspartate beta-semialdehyde dehydrogenase {Escheri | 92.76 | |
| d1qyca_ | 307 | Phenylcoumaran benzylic ether reductase {Loblolly | 92.64 | |
| d1ebda2 | 117 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 92.61 | |
| d1j6ua1 | 89 | UDP-N-acetylmuramate-alanine ligase MurC {Thermoto | 92.56 | |
| d2pgda2 | 176 | 6-phosphogluconate dehydrogenase {Sheep (Ovis orie | 92.51 | |
| d1id1a_ | 153 | Rck domain from putative potassium channel Kch {Es | 92.41 | |
| d1ek6a_ | 346 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 92.3 | |
| d1jbqa_ | 355 | Cystathionine beta-synthase {Human (Homo sapiens) | 92.23 | |
| d1gtea4 | 196 | Dihydropyrimidine dehydrogenase, domain 2 {Pig (Su | 92.22 | |
| d1b0aa1 | 166 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 92.15 | |
| d1nhpa2 | 123 | NADH peroxidase {Enterococcus faecalis [TaxId: 135 | 92.14 | |
| d1sc6a1 | 188 | Phosphoglycerate dehydrogenase {Escherichia coli [ | 92.06 | |
| d1ps9a3 | 179 | 2,4-dienoyl-CoA reductase, middle domain {Escheric | 92.04 | |
| d1wxxa2 | 318 | Hypothetical protein TTHA1280, middle and C-termin | 92.04 | |
| d3etja2 | 78 | N5-carboxyaminoimidazole ribonucleotide synthetase | 91.73 | |
| d2voua1 | 265 | Dihydroxypyridine hydroxylase DhpH {Arthrobacter n | 91.65 | |
| d1uira_ | 312 | Spermidine synthase {Thermus thermophilus [TaxId: | 91.64 | |
| d1d7ya2 | 121 | NADH-dependent ferredoxin reductase, BphA4 {Pseudo | 91.63 | |
| d1iy9a_ | 274 | Spermidine synthase {Bacillus subtilis [TaxId: 142 | 91.61 | |
| d2o07a1 | 285 | Spermidine synthase {Human (Homo sapiens) [TaxId: | 91.57 | |
| d1f0ya2 | 192 | Short chain L-3-hydroxyacyl CoA dehydrogenase {Hum | 91.53 | |
| d1diha1 | 162 | Dihydrodipicolinate reductase {Escherichia coli [T | 91.46 | |
| d1ws6a1 | 171 | Methyltransferase TTHA0928 {Thermus thermophilus [ | 91.43 | |
| d1tlta1 | 164 | Virulence factor MviM {Escherichia coli [TaxId: 56 | 91.38 | |
| d2ex4a1 | 222 | Adrenal gland protein AD-003 (C9orf32) {Human (Hom | 91.35 | |
| d1v9la1 | 242 | Glutamate dehydrogenase {Pyrobaculum islandicum [T | 91.32 | |
| d1mjfa_ | 276 | Putative spermidine synthetase PF0127 (SpeE) {Arch | 91.28 | |
| d1v59a2 | 122 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 91.26 | |
| d2cvoa1 | 183 | Putative semialdehyde dehydrogenase {Rice (Oryza s | 91.25 | |
| d3lada2 | 119 | Dihydrolipoamide dehydrogenase {Azotobacter vinela | 91.12 | |
| d1gesa2 | 116 | Glutathione reductase {Escherichia coli [TaxId: 56 | 91.05 | |
| d2dula1 | 375 | N(2),N(2)-dimethylguanosine tRNA methyltransferase | 91.01 | |
| d2gh1a1 | 281 | Methyltransferase BC2162 {Bacillus cereus [TaxId: | 90.99 | |
| d2g82a1 | 168 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 90.76 | |
| d1kyqa1 | 150 | Bifunctional dehydrogenase/ferrochelatase Met8p, N | 90.73 | |
| d1kewa_ | 361 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 90.69 | |
| d1z7wa1 | 320 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 90.57 | |
| d1dxla2 | 123 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 90.53 | |
| d1tw3a2 | 253 | Carminomycin 4-O-methyltransferase {Streptomyces p | 90.5 | |
| d1t2aa_ | 347 | GDP-mannose 4,6-dehydratase {Human (Homo sapiens) | 90.41 | |
| d1n2sa_ | 298 | dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {S | 90.39 | |
| d1sb8a_ | 341 | UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomo | 90.32 | |
| d1a4ia1 | 170 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 90.15 | |
| d1lvla2 | 115 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 90.11 | |
| d1seza1 | 373 | Protoporphyrinogen oxidase {Tobacco (Nicotiana tab | 90.04 | |
| d2fyta1 | 311 | Protein arginine N-methyltransferase 3, PRMT3 {Hum | 89.98 | |
| d1q1ra2 | 133 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 89.95 | |
| d3grsa2 | 125 | Glutathione reductase {Human (Homo sapiens) [TaxId | 89.94 | |
| d2hjsa1 | 144 | Usg-1 protein homolog PA3116 {Pseudomonas aerugino | 89.94 | |
| d2fcaa1 | 204 | tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacil | 89.86 | |
| d1ri5a_ | 252 | mRNA cap (Guanine N-7) methyltransferase {Fungus ( | 89.85 | |
| d1djqa3 | 233 | Trimethylamine dehydrogenase, middle domain {Methy | 89.84 | |
| d1ojta2 | 125 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 89.71 | |
| d1dssg1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.68 | |
| d1y7la1 | 310 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 89.66 | |
| d1eq2a_ | 307 | ADP-L-glycero-D-mannoheptose 6-epimerase {Escheric | 89.6 | |
| d1obfo1 | 173 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 89.38 | |
| d1bgva1 | 255 | Glutamate dehydrogenase {Clostridium symbiosum [Ta | 89.21 | |
| d1y8ca_ | 246 | Putative methyltransferase CAC2371 {Clostridium ac | 89.08 | |
| d2p7ia1 | 225 | Hypothetical protein ECA1738 {Erwinia carotovora [ | 89.0 | |
| d1jqea_ | 280 | Histamine methyltransferase {Human (Homo sapiens) | 88.99 | |
| d1gado1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.84 | |
| d1jw9b_ | 247 | Molybdenum cofactor biosynthesis protein MoeB {Esc | 88.79 | |
| d1gy8a_ | 383 | Uridine diphosphogalactose-4-epimerase (UDP-galact | 88.63 | |
| d1inla_ | 295 | Spermidine synthase {Thermotoga maritima [TaxId: 2 | 88.58 | |
| d1m6ya2 | 192 | TM0872, methyltransferase domain {Thermotoga marit | 88.4 | |
| d1u8fo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 88.38 | |
| d1mb4a1 | 147 | Aspartate beta-semialdehyde dehydrogenase {Vibrio | 88.26 | |
| d1oria_ | 316 | Protein arginine N-methyltransferase 1, PRMT1 {Rat | 88.14 | |
| d1hwxa1 | 293 | Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: | 87.93 | |
| d1qzza2 | 256 | Aclacinomycin-10-hydroxylase RdmB {Streptomyces pu | 87.87 | |
| d2i76a2 | 153 | Hypothetical protein TM1727 {Thermotoga maritima [ | 87.8 | |
| d2iida1 | 370 | L-aminoacid oxidase {Malayan pit viper (Calloselas | 87.71 | |
| d1lssa_ | 132 | Ktn Mja218 {Archaeon Methanococcus jannaschii [Tax | 87.66 | |
| d1ldna1 | 148 | Lactate dehydrogenase {Bacillus stearothermophilus | 87.56 | |
| d1vkna1 | 176 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 87.54 | |
| d3cmco1 | 171 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.25 | |
| d1hdgo1 | 169 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 87.23 | |
| d1o58a_ | 293 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 87.02 | |
| d1fcja_ | 302 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 86.99 | |
| d1xhca2 | 122 | NADH oxidase /nitrite reductase {Pyrococcus furios | 86.98 | |
| d1k0ia1 | 292 | p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas a | 86.78 | |
| d1feca2 | 117 | Trypanothione reductase {Crithidia fasciculata [Ta | 86.41 | |
| d2b78a2 | 317 | Hypothetical protein SMu776, middle and C-terminal | 86.32 | |
| d1c0pa1 | 268 | D-aminoacid oxidase, N-terminal domain {Rhodotorul | 85.98 | |
| d1e6ua_ | 315 | GDP-4-keto-6-deoxy-d-mannose epimerase/reductase ( | 85.92 | |
| d2b4ro1 | 166 | Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) { | 85.76 | |
| d1fl2a1 | 184 | Alkyl hydroperoxide reductase subunit F (AhpF), C- | 85.68 | |
| d1djqa2 | 156 | Trimethylamine dehydrogenase, C-terminal domain {M | 85.44 | |
| d3c96a1 | 288 | Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: | 85.35 | |
| d1trba1 | 190 | Thioredoxin reductase {Escherichia coli [TaxId: 56 | 85.32 | |
| d2fy8a1 | 129 | Potassium channel-related protein MthK {Archaeon M | 85.27 | |
| d1dxla1 | 221 | Dihydrolipoamide dehydrogenase {Garden pea (Pisum | 85.17 | |
| d1fcda1 | 186 | Flavocytochrome c sulfide dehydrogenase, FCSD, fla | 85.17 | |
| d1g6q1_ | 328 | Arginine methyltransferase, HMT1 {Baker's yeast (S | 85.1 | |
| d1q1ra1 | 185 | Putidaredoxin reductase {Pseudomonas putida [TaxId | 84.79 | |
| d1sqga2 | 284 | Ribosomal RNA small subunit methyltransferase B, R | 84.76 | |
| d1edza1 | 171 | Methylenetetrahydrofolate dehydrogenase/cyclohydro | 84.7 | |
| d1i36a2 | 152 | Conserved hypothetical protein MTH1747 {Archaeon M | 84.65 | |
| d2gqfa1 | 253 | Hypothetical protein HI0933 {Haemophilus influenza | 84.53 | |
| d1f06a1 | 170 | Diaminopimelic acid dehydrogenase (DAPDH) {Coryneb | 84.5 | |
| d2bi7a1 | 314 | UDP-galactopyranose mutase, N-terminal domain {Kle | 84.37 | |
| d1tdja1 | 331 | Threonine deaminase {Escherichia coli [TaxId: 562] | 84.33 | |
| d1euca1 | 130 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 84.25 | |
| d2g17a1 | 179 | N-acetyl-gamma-glutamyl-phosphate reductase ArgC { | 84.23 | |
| d2i0za1 | 251 | Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396] | 84.19 | |
| d1gtea3 | 153 | Dihydropyrimidine dehydrogenase, domain 3 {Pig (Su | 83.74 | |
| d1r6da_ | 322 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces | 83.71 | |
| d1aoga2 | 117 | Trypanothione reductase {Trypanosoma cruzi [TaxId: | 83.16 | |
| d1b5qa1 | 347 | Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | 82.47 | |
| d1u8xx1 | 167 | Maltose-6'-phosphate glucosidase GlvA {Bacillus su | 82.46 | |
| d2dw4a2 | 449 | Lysine-specific histone demethylase 1, LSD1 {Human | 82.23 | |
| d1gesa1 | 217 | Glutathione reductase {Escherichia coli [TaxId: 56 | 82.22 | |
| d1pgja2 | 178 | 6-phosphogluconate dehydrogenase {Trypanosoma bruc | 82.2 | |
| d2a14a1 | 257 | Indolethylamine N-methyltransferase, INMT {Human ( | 82.13 | |
| d1wkva1 | 382 | O-acetylserine sulfhydrylase (Cysteine synthase) { | 81.77 | |
| d2ivda1 | 347 | Protoporphyrinogen oxidase {Myxococcus xanthus [Ta | 81.65 | |
| d1oc2a_ | 346 | dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus | 81.37 | |
| d1lvla1 | 220 | Dihydrolipoamide dehydrogenase {Pseudomonas putida | 81.26 | |
| d1v59a1 | 233 | Dihydrolipoamide dehydrogenase {Baker's yeast (Sac | 81.25 | |
| d1ebda1 | 223 | Dihydrolipoamide dehydrogenase {Bacillus stearothe | 81.24 | |
| d1p5ja_ | 319 | L-serine dehydratase {Human (Homo sapiens) [TaxId: | 80.96 | |
| d2cmda1 | 145 | Malate dehydrogenase {Escherichia coli [TaxId: 562 | 80.76 | |
| d1mv8a2 | 202 | GDP-mannose 6-dehydrogenase {Pseudomonas aeruginos | 80.69 | |
| d1zn7a1 | 178 | Adenine PRTase {Human (Homo sapiens) [TaxId: 9606] | 80.67 | |
| d1ojta1 | 229 | Dihydrolipoamide dehydrogenase {Neisseria meningit | 80.52 | |
| d1oi7a1 | 121 | Succinyl-CoA synthetase, alpha-chain, N-terminal ( | 80.04 |
| >d1pqwa_ c.2.1.1 (A:) Putative enoyl reductase domain of polyketide synthase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative enoyl reductase domain of polyketide synthase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=99.97 E-value=9.3e-31 Score=211.61 Aligned_cols=175 Identities=21% Similarity=0.341 Sum_probs=153.0
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
|||+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+..|++|+++++++++.+.++ ++|+++++++++.
T Consensus 2 eAA~l~~~~~TA~~al~~~~~~~~g~~VlI~ga~g~vG~~~iqla~~~g~~vi~~~~~~~~~~~l~-~~Ga~~vi~~~~~ 80 (183)
T d1pqwa_ 2 EAATFGVAYLTAWHSLCEVGRLSPGERVLIHSATGGVGMAAVSIAKMIGARIYTTAGSDAKREMLS-RLGVEYVGDSRSV 80 (183)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCTTCEEEETTTTSHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-TTCCSEEEETTCS
T ss_pred chhhhhHHHHHHHHHHHHHhCCCCCCEEEEECCCCCcccccchhhccccccceeeecccccccccc-cccccccccCCcc
Confidence 588999999999999989899999999999999999999999999999999999999999999999 9999999999998
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc-
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY- 286 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 286 (342)
++.+++++.+++ ++|++|||+|++.++.++++|+++|+++.+|..+.. .........+.+++++.++.....
T Consensus 81 -~~~~~v~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~ 154 (183)
T d1pqwa_ 81 -DFADEILELTDGYGVDVVLNSLAGEAIQRGVQILAPGGRFIELGKKDVY-----ADASLGLAALAKSASFSVVDLDLNL 154 (183)
T ss_dssp -THHHHHHHHTTTCCEEEEEECCCTHHHHHHHHTEEEEEEEEECSCGGGT-----TTCEEEGGGGTTTCEEEECCHHHHH
T ss_pred -CHHHHHHHHhCCCCEEEEEecccchHHHHHHHHhcCCCEEEEEccCCCC-----CCcccchHHHhCCcEEEEEEcccee
Confidence 999999999988 999999999999999999999999999999876543 122233445567888877765433
Q ss_pred ---ccchHHHHHHHHHHHHcCCceeee
Q 019332 287 ---YHLYPKFLEMIIPHIKEGKIVYVE 310 (342)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~g~~~~~~ 310 (342)
+...++.++++++++.+|+++|.|
T Consensus 155 ~~~~~~~~~~~~~v~~~i~~G~i~p~P 181 (183)
T d1pqwa_ 155 KLQPARYRQLLQHILQHVADGKLEVLP 181 (183)
T ss_dssp HHCHHHHHHHHHHHHHHHHTTSSCCCC
T ss_pred ccCHHHHHHHHHHHHHHHHCCCCceeC
Confidence 345567899999999999999854
|
| >d1v3va2 c.2.1.1 (A:113-294) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.97 E-value=1.1e-29 Score=204.80 Aligned_cols=173 Identities=47% Similarity=0.766 Sum_probs=150.0
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
.++++++++|||++|.+.+++++||+|||+||+|++|++++|+|+..|++||++++++++.++++ ++|+++++++++.
T Consensus 7 l~~lg~~glTA~~al~~~~~v~~G~~VlV~ga~ggvG~~aiqlak~~Ga~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~- 84 (182)
T d1v3va2 7 LGTIGMPGLTAYFGLLEVCGVKGGETVLVSAAAGAVGSVVGQIAKLKGCKVVGAAGSDEKIAYLK-QIGFDAAFNYKTV- 84 (182)
T ss_dssp GTTTSHHHHHHHHHHHTTTCCCSSCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTSC-
T ss_pred HHHHhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchhHHHHHHHHccCCEEEEeCCCHHHHHHHH-hhhhhhhcccccc-
Confidence 56888999999999999999999999999999999999999999999999999999999999999 9999999999988
Q ss_pred hHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCC-ccccchHHHHhcceeeecceeccc-
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRP-EGVHNLMYLVTKRVRMEGFLVRDY- 286 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~- 286 (342)
++.+.+.+.+.+ ++|+||||+|++.++.++++++++|+++.+|..+..+...+ ........++.+++++.++....+
T Consensus 85 ~~~~~~~~~~~~~Gvd~v~D~vG~~~~~~~~~~l~~~G~~v~~G~~~~~~~~~~~~~~~~~~~l~~k~~ti~g~~~~~~~ 164 (182)
T d1v3va2 85 NSLEEALKKASPDGYDCYFDNVGGEFLNTVLSQMKDFGKIAICGAISVYNRMDQLPPGPSPESIIYKQLRIEGFIVYRWQ 164 (182)
T ss_dssp SCHHHHHHHHCTTCEEEEEESSCHHHHHHHGGGEEEEEEEEECCCGGGTTCTTSCCBCCCHHHHHHTTCEEEECCGGGCC
T ss_pred cHHHHHHHHhhcCCCceeEEecCchhhhhhhhhccCCCeEEeecceeeccccccCCCCcchHHHhhcCcEEEEEEEeccC
Confidence 888887777666 99999999999999999999999999999997665433222 223456778899999999887766
Q ss_pred ccchHHHHHHHHHHHHcC
Q 019332 287 YHLYPKFLEMIIPHIKEG 304 (342)
Q Consensus 287 ~~~~~~~~~~~~~~~~~g 304 (342)
.+..++.++++++++.+|
T Consensus 165 ~~~~~~~~~~l~~~i~~G 182 (182)
T d1v3va2 165 GDVREKALRDLMKWVLEG 182 (182)
T ss_dssp HHHHHHHHHHHHHHHHTT
T ss_pred hHHHHHHHHHHHHHHhCc
Confidence 344567789999999876
|
| >d1yb5a2 c.2.1.1 (A:121-294) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=2.7e-29 Score=200.97 Aligned_cols=163 Identities=26% Similarity=0.362 Sum_probs=142.0
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++|+++++++|||++|.+.+++++|++|||+|++|++|++++|+|+..|++|++++++++|.++++ ++|+++++|+++.
T Consensus 5 ~AA~l~~~~~TA~~al~~~~~~~~g~~VlV~Ga~G~vG~~aiq~a~~~G~~vi~~~~~~~~~~~~~-~~Ga~~vi~~~~~ 83 (174)
T d1yb5a2 5 QGAAIGIPYFTAYRALIHSACVKAGESVLVHGASGGVGLAACQIARAYGLKILGTAGTEEGQKIVL-QNGAHEVFNHREV 83 (174)
T ss_dssp HHTTTHHHHHHHHHHHHTTSCCCTTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH-HTTCSEEEETTST
T ss_pred HHHHhHHHHHHHHHHHHHHhCCCCCCEEEEEeccccccccccccccccCccccccccccccccccc-ccCcccccccccc
Confidence 388999999999999988899999999999999999999999999999999999999999999999 9999999999998
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
++.+.+++.+++ ++|++|||+|++.++.++++++++|+++.+|.... ...+...++.+++++.++.+...
T Consensus 84 -~~~~~i~~~t~~~g~d~v~d~~g~~~~~~~~~~l~~~G~iv~~G~~~~-------~~~~~~~~~~k~~~i~g~~~~~~- 154 (174)
T d1yb5a2 84 -NYIDKIKKYVGEKGIDIIIEMLANVNLSKDLSLLSHGGRVIVVGSRGT-------IEINPRDTMAKESSIIGVTLFSS- 154 (174)
T ss_dssp -THHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHEEEEEEEEECCCCSC-------EEECTHHHHTTTCEEEECCGGGC-
T ss_pred -cHHHHhhhhhccCCceEEeecccHHHHHHHHhccCCCCEEEEEecCCC-------CCCCHHHHHHCCCEEEEEEecCC-
Confidence 999999999988 89999999999999999999999999999986433 23456778889999999865542
Q ss_pred cchHHHHHHHHHHHHc
Q 019332 288 HLYPKFLEMIIPHIKE 303 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~ 303 (342)
.++.++++.+++.+
T Consensus 155 --~~~~~~~~~~~l~~ 168 (174)
T d1yb5a2 155 --TKEEFQQYAAALQA 168 (174)
T ss_dssp --CHHHHHHHHHHHHH
T ss_pred --CHHHHHHHHHHHHH
Confidence 23445555555543
|
| >d1qora2 c.2.1.1 (A:113-291) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.96 E-value=1.1e-28 Score=198.48 Aligned_cols=169 Identities=24% Similarity=0.287 Sum_probs=140.7
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++|+++++++|||++|.+.+++++|++|||+||+|++|++++|+|+..|++|++++++++|.++++ ++|+++++|++++
T Consensus 5 ~AA~~~~~~~TA~~al~~~~~l~~g~~Vlv~ga~g~vG~~~iqlak~~Ga~Vi~~~~s~~k~~~~~-~lGa~~vi~~~~~ 83 (179)
T d1qora2 5 QAAASFLKGLTVYYLLRKTYEIKPDEQFLFHAAAGGVGLIACQWAKALGAKLIGTVGTAQKAQSAL-KAGAWQVINYREE 83 (179)
T ss_dssp HHHHHHHHHHHHHHHHHTTSCCCTTCEEEESSTTBHHHHHHHHHHHHHTCEEEEEESSHHHHHHHH-HHTCSEEEETTTS
T ss_pred HHHHHHHHHHHHHHHHHHHhCCCCCCEEEEEccccccchHHHHHHHHhCCeEeecccchHHHHHHH-hcCCeEEEECCCC
Confidence 388999999999999988899999999999999999999999999999999999999999999999 9999999999998
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHh-cceeeecceeccc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVT-KRVRMEGFLVRDY 286 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~ 286 (342)
++.++++++|++ ++|+++|++|++.+..++++++++|+++.++...... ...+...+.. ..+.+....+..+
T Consensus 84 -d~~~~v~~~t~g~g~d~v~d~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~-----~~~~~~~~~~~~~~~~~~~~l~~~ 157 (179)
T d1qora2 84 -DLVERLKEITGGKKVRVVYDSVGRDTWERSLDCLQRRGLMVSFGNSSGAV-----TGVNLGILNQKGSLYVTRPSLQGY 157 (179)
T ss_dssp -CHHHHHHHHTTTCCEEEEEECSCGGGHHHHHHTEEEEEEEEECCCTTCCC-----CCBCTHHHHHTTSCEEECCCHHHH
T ss_pred -CHHHHHHHHhCCCCeEEEEeCccHHHHHHHHHHHhcCCeeeecccccCCc-----cccchhhhhccceEEEEeeEEeee
Confidence 999999999988 9999999999999999999999999999998766542 2223333332 2344433333222
Q ss_pred ---ccchHHHHHHHHHHHHcC
Q 019332 287 ---YHLYPKFLEMIIPHIKEG 304 (342)
Q Consensus 287 ---~~~~~~~~~~~~~~~~~g 304 (342)
++...+.++++++++++|
T Consensus 158 ~~~~~~~~~~~~~l~~lv~~G 178 (179)
T d1qora2 158 ITTREELTEASNELFSLIASG 178 (179)
T ss_dssp CCSHHHHHHHHHHHHHHHHTT
T ss_pred cCCHHHHHHHHHHHHHHHHCc
Confidence 334456677888888887
|
| >d1yb5a1 b.35.1.2 (A:6-120,A:295-329) Quinone oxidoreductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.96 E-value=7.5e-29 Score=192.52 Aligned_cols=144 Identities=17% Similarity=0.265 Sum_probs=124.7
Q ss_pred cccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEE
Q 019332 6 RNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 6 ~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~ 84 (342)
.|||++++++ |+| +.++++. +.|.| .++++||||||++++||++|++.+.|.+. ...+|.++|||++| +|+
T Consensus 2 ~MkAv~~~~~--G~p--~~l~~~~-~~~~P-~~~~~eVlVkv~a~~i~~~D~~~~~g~~~~~~~~p~i~G~e~~G--~V~ 73 (150)
T d1yb5a1 2 LMRAVRVFEF--GGP--EVLKLRS-DIAVP-IPKDHQVLIKVHACGVNPVETYIRSGTYSRKPLLPYTPGSDVAG--VIE 73 (150)
T ss_dssp EEEEEEESSC--SSG--GGEEEEE-EEECC-CCCTTEEEEEEEEEECCHHHHHHHHTCSSCCCCSSBCCCSCEEE--EEE
T ss_pred ceeEEEEEcc--CCc--ceEEEEe-ecCCC-CCCCCeEEEEEEEecCcccchhhhcCCcCccccccccCccceee--eeE
Confidence 4799999999 988 5666653 35666 45899999999999999999999988763 34678999999776 999
Q ss_pred EecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 85 VLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
++|+++++|++||||++. |+|+||+.++++.++++ |++++.. ++|++++.++|+++++...+..+.|+++||+
T Consensus 74 ~vG~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~~g~~~~G~~vliL 150 (150)
T d1yb5a1 74 AVGDNASAFKKGDRVFTSSTISGGYAEYALAADHTVYKL-PEKLKPV-IGSQYPLEKVAEAHENIIHGSGATGKMILLL 150 (150)
T ss_dssp EECTTCTTCCTTCEEEESCCSSCSSBSEEEEEGGGEEEC-CTTCCCC-EEEEEEGGGHHHHHHHHHHSSCCSSEEEEEC
T ss_pred eecceeeccccCccccccccccccccccccccccccccc-cCCCCHH-HHHHhhhhhhhehhhheEEcCcccCCEEEEC
Confidence 999999999999999987 79999999999999999 9995554 3888999999999999888999999999984
|
| >d1vj1a2 c.2.1.1 (A:125-311) Putative zinc-binding alcohol dehydrogenase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Putative zinc-binding alcohol dehydrogenase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=99.96 E-value=2.2e-28 Score=197.67 Aligned_cols=179 Identities=38% Similarity=0.663 Sum_probs=144.4
Q ss_pred ccchhhccCCchhhHHHhhhhhcCCCCC--CEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCee
Q 019332 126 LSYYTGILGMPGMTAYAGFYEVCSPKQG--ECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEA 202 (342)
Q Consensus 126 ~~~~~a~l~~~~~ta~~al~~~~~~~~~--~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v 202 (342)
+++...+++++++|||++|.+.+++++| ++|||+||+|++|++++|+|+..|+ .|+++++++++...+.+++|++.+
T Consensus 2 ~~~~~galg~~glTA~~~l~~~~~~~~G~~etVLI~gaaGgVG~~aiQlak~~Ga~~vi~~~~~~e~~~~l~~~~gad~v 81 (187)
T d1vj1a2 2 LSYFLGAIGMPGLTSLIGVQEKGHISAGSNQTMVVSGAAGACGSLAGQIGHLLGCSRVVGICGTQEKCLFLTSELGFDAA 81 (187)
T ss_dssp GGGGGTTTSHHHHHHHHHHHHHSCCCTTSCCEEEESSTTSTTGGGHHHHHHHTTCSEEEEEESSHHHHHHHHHHSCCSEE
T ss_pred ccHHHHHhhcHHHHHHHHHHHHhCCCCCCCCEEEEECCCchhhHHHHHHHHHcCCcceecccchHHHHhhhhhcccceEE
Confidence 4555667889999999999999999987 8999999999999999999999999 566677777766656548999999
Q ss_pred EecCCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCC----ccccchHHHHhcceee
Q 019332 203 FNYKEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRP----EGVHNLMYLVTKRVRM 278 (342)
Q Consensus 203 ~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~ 278 (342)
+|++++ ++.+.+++.++.|+|++||++|++.++.++++++++|+++.+|..++.+...+ ........+..+++++
T Consensus 82 i~~~~~-~~~~~~~~~~~~GvDvv~D~vGg~~~~~~~~~l~~~G~iv~~G~~s~~~~~~~~~~~~~~~~~~~~~~k~i~~ 160 (187)
T d1vj1a2 82 VNYKTG-NVAEQLREACPGGVDVYFDNVGGDISNTVISQMNENSHIILCGQISQYNKDVPYPPPLPPAVEAIRKERNITR 160 (187)
T ss_dssp EETTSS-CHHHHHHHHCTTCEEEEEESSCHHHHHHHHTTEEEEEEEEEC------------CCCCCHHHHHHHHHTTCEE
T ss_pred eeccch-hHHHHHHHHhccCceEEEecCCchhHHHHhhhccccccEEEeccccccccccccCCchHHHHHHHHHhcceEE
Confidence 999998 99999999997799999999999999999999999999999997655322221 1112234566789999
Q ss_pred ecceecccccchHHHHHHHHHHHHcCC
Q 019332 279 EGFLVRDYYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~g~ 305 (342)
.++.+.++.+.+.+.++++.+++.+|+
T Consensus 161 ~g~~~~~~~~~~~e~~~~l~~~i~~Gk 187 (187)
T d1vj1a2 161 ERFTVLNYKDKFEPGILQLSQWFKEGK 187 (187)
T ss_dssp EECCGGGCGGGHHHHHHHHHHHHHHTS
T ss_pred EEeEecchHHHHHHHHHHHHHHHHCcC
Confidence 988777777777888999999999885
|
| >d1xa0a2 c.2.1.1 (A:119-294) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.95 E-value=1.1e-28 Score=195.81 Aligned_cols=168 Identities=21% Similarity=0.256 Sum_probs=133.5
Q ss_pred hhhccCCchhhHHHhhh---hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEec
Q 019332 129 YTGILGMPGMTAYAGFY---EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNY 205 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~---~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~ 205 (342)
++|+++++++|||+++. +.++.++|++|||+||+|++|.+++|+|+..|++|++++++++|.++++ ++|+++++||
T Consensus 5 eAAal~~aglTA~~a~~~L~~~g~~~~g~~VLI~gaaGGVG~~aiQlak~~Ga~Viat~~s~~k~~~~~-~lGa~~vi~~ 83 (176)
T d1xa0a2 5 EAMAIGTAGFTAALSIHRLEEHGLTPERGPVLVTGATGGVGSLAVSMLAKRGYTVEASTGKAAEHDYLR-VLGAKEVLAR 83 (176)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCCEEESSTTSHHHHHHHHHHHHTTCCEEEEESCTTCHHHHH-HTTCSEEEEC
T ss_pred HHHHhhhHHHHHHHHHHHHHHhCCCCCCCEEEEEeccchHHHHHHHHHHHcCCceEEecCchHHHHHHH-hcccceeeec
Confidence 49999999999997754 4588899999999999999999999999999999999999999999999 9999999998
Q ss_pred CCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 206 KEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
++ .+.+.++...++++|+|||++|++.+..++++|+++|+++.+|...+. ....+...++.|++++.|.....
T Consensus 84 ~~--~~~~~~~~~~~~gvD~vid~vgg~~~~~~l~~l~~~Griv~~G~~~g~-----~~~~~~~~~~~k~~~i~Gv~~~~ 156 (176)
T d1xa0a2 84 ED--VMAERIRPLDKQRWAAAVDPVGGRTLATVLSRMRYGGAVAVSGLTGGA-----EVPTTVHPFILRGVSLLGIDSVY 156 (176)
T ss_dssp C-----------CCSCCEEEEEECSTTTTHHHHHHTEEEEEEEEECSCCSSS-----CCCCCSHHHHHTTCEEEECCSSS
T ss_pred ch--hHHHHHHHhhccCcCEEEEcCCchhHHHHHHHhCCCceEEEeecccCc-----ccCCCHHHHHHCCcEEEEEeCCc
Confidence 75 444555444444999999999999999999999999999999987664 34567888899999999965433
Q ss_pred cccchHHHHHHHHHHHHcCCcee
Q 019332 286 YYHLYPKFLEMIIPHIKEGKIVY 308 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~~~~ 308 (342)
.+ .+....+++.+. +.++|
T Consensus 157 ~~---~~~~~~~~~~la-g~lkP 175 (176)
T d1xa0a2 157 CP---MDLRLRIWERLA-GDLKP 175 (176)
T ss_dssp CC---HHHHHHHHHHHH-TTTCC
T ss_pred CC---HHHHHHHHHHHh-cccCC
Confidence 21 333444555553 66665
|
| >d1f8fa2 c.2.1.1 (A:163-336) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.95 E-value=5.7e-27 Score=187.09 Aligned_cols=167 Identities=22% Similarity=0.255 Sum_probs=146.2
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++.++|.+.|||+++.+.+++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|+++++|++++
T Consensus 6 aapl~ca~~Ta~~a~~~~~~~~~g~~VlI~G~-G~iG~~~~~~ak~~g~~~v~~~~~~~~k~~~a~-~~Ga~~~i~~~~~ 83 (174)
T d1f8fa2 6 LGPLGCGIQTGAGACINALKVTPASSFVTWGA-GAVGLSALLAAKVCGASIIIAVDIVESRLELAK-QLGATHVINSKTQ 83 (174)
T ss_dssp TGGGGTHHHHHHHHHHTTTCCCTTCEEEEESC-SHHHHHHHHHHHHHTCSEEEEEESCHHHHHHHH-HHTCSEEEETTTS
T ss_pred HHHHhhHHHHHHHHHHHhhCCCCCCEEEEeCC-CHHHhhhhhcccccccceeeeeccHHHHHHHHH-HcCCeEEEeCCCc
Confidence 88999999999999888899999999999997 9999999999999999 6677888999999999 9999999999998
Q ss_pred hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccc
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYY 287 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 287 (342)
++.+++++++++++|++|||+|+ ..++.++++++++|+++.+|..... .....+...++.+++++.|+...+..
T Consensus 84 -~~~~~i~~~t~gg~D~vid~~G~~~~~~~~~~~~~~~G~i~~~G~~~~~----~~~~~~~~~~~~k~~~i~Gs~~g~~~ 158 (174)
T d1f8fa2 84 -DPVAAIKEITDGGVNFALESTGSPEILKQGVDALGILGKIAVVGAPQLG----TTAQFDVNDLLLGGKTILGVVEGSGS 158 (174)
T ss_dssp -CHHHHHHHHTTSCEEEEEECSCCHHHHHHHHHTEEEEEEEEECCCCSTT----CCCCCCHHHHHHTTCEEEECSGGGSC
T ss_pred -CHHHHHHHHcCCCCcEEEEcCCcHHHHHHHHhcccCceEEEEEeecCCC----cccccCHHHHHHCCCEEEEEEecCCC
Confidence 99999999998899999999998 7889999999999999999875432 12345677889999999998655432
Q ss_pred cchHHHHHHHHHHHHcCC
Q 019332 288 HLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 288 ~~~~~~~~~~~~~~~~g~ 305 (342)
.+++++++++++++|+
T Consensus 159 --~~~~~~~~~~l~~~Gk 174 (174)
T d1f8fa2 159 --PKKFIPELVRLYQQGK 174 (174)
T ss_dssp --HHHHHHHHHHHHHTTS
T ss_pred --hHHHHHHHHHHHHcCC
Confidence 2567899999999885
|
| >d1qora1 b.35.1.2 (A:2-112,A:292-327) Quinone oxidoreductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Escherichia coli [TaxId: 562]
Probab=99.95 E-value=6.8e-28 Score=186.75 Aligned_cols=140 Identities=12% Similarity=0.092 Sum_probs=119.2
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEec
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVLD 87 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~vG 87 (342)
+.+.|.++ |+| +.|++++ .|.| .++++||+|||.|+++|++|++++.|.++...+|.++|||++| +|+++|
T Consensus 2 ~~i~~~~~--G~p--e~l~~~e--~~~P-~p~~~eVlVkv~a~~in~~D~~~~~G~~~~~~~p~~~G~e~~G--~V~~vG 72 (147)
T d1qora1 2 TRIEFHKH--GGP--EVLQAVE--FTPA-DPAENEIQVENKAIGINFIDTYIRSGLYPPPSLPSGLGTEAAG--IVSKVG 72 (147)
T ss_dssp EEEEBSSC--CSG--GGCEEEE--CCCC-CCCTTEEEEEEEEEECCHHHHHHHHTSSCCSSSSBCCCSCEEE--EEEEEC
T ss_pred eEEEEccc--CCC--ceeEEEE--ecCC-CCCCCEEEEEEEEecccceeeeeecCCCCCCcceeeecccccc--ceeeee
Confidence 46788888 988 5677766 4445 4589999999999999999999999988777789999999776 999999
Q ss_pred CCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccch-hhccCCchhhHHHhhhhhcCCCCCCEEEE
Q 019332 88 SENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYY-TGILGMPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 88 ~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~-~a~l~~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
+++++|++||||+.. |+|+||+.++.+.++++ |++++++.. +++++....++++++.+ .++++|++|||
T Consensus 73 ~~v~~~~vGdrV~~~~~~~G~~ae~~~v~~~~~~~~-P~~~~~~~a~a~~~~~~~~~~~~~l~~-~~~~~G~~VLI 146 (147)
T d1qora1 73 SGVKHIKAGDRVVYAQSALGAYSSVHNIIADKAAIL-PAAIKVDVAEQQKYPLKDAQRAHEILE-SRATQGSSLLI 146 (147)
T ss_dssp TTCCSCCTTCEEEESCCSSCCSBSEEEEEGGGEEEC-CTTSCCCCCGGGEEEGGGHHHHHHHHH-TTCCCBCCEEE
T ss_pred eecccccccceeeeeccccccceeEEEEehHHeEEc-CcccchHHHHHHHHHHHHHHHHHHHHH-hCCCCCCEEEe
Confidence 999999999999854 78999999999999999 998666642 45667777888888855 68999999998
|
| >d1llua1 b.35.1.2 (A:2-143,A:310-342) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.95 E-value=1.3e-27 Score=190.98 Aligned_cols=143 Identities=17% Similarity=0.080 Sum_probs=119.5
Q ss_pred CccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCccccc
Q 019332 2 PEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGY 80 (342)
Q Consensus 2 ~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~ 80 (342)
++|.+|||+++.++ |+| +++++.++| .++++||||||.++|||++|++.+.|.++ ...+|.++|||++|
T Consensus 1 ~~P~tMkA~v~~~~--g~p----l~l~evp~P---~~~~~evlVkv~a~gic~~D~~~~~G~~~~~~~~P~i~GhE~~G- 70 (175)
T d1llua1 1 TLPQTMKAAVVHAY--GAP----LRIEEVKVP---LPGPGQVLVKIEASGVCHTDLHAAEGDWPVKPPLPFIPGHEGVG- 70 (175)
T ss_dssp CCCSEEEEEEBCST--TSC----CEEEEEECC---CCCTTCEEEEEEEEECCHHHHHHHHTCSSSCCCSSBCCCSCEEE-
T ss_pred CcchhcEEEEEEeC--CCC----CEEEEeECC---CCCCCEEEEEEEEecCcccchhhhccCccccccCCcCCCCcceE-
Confidence 36789999999999 877 678765554 55899999999999999999999998764 45679999999766
Q ss_pred EEEEEecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccch
Q 019332 81 GVAKVLDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYY 129 (342)
Q Consensus 81 g~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~ 129 (342)
+|+++|++++++++||||+.. |+|+||++++++.++++ |++++...
T Consensus 71 -~V~~~G~~v~~~~~GdrV~~~~~~~~~g~~~~~~~g~~~~~~~~~~~G~~~~gg~aey~~v~~~~~~~i-Pd~l~~~~- 147 (175)
T d1llua1 71 -YVAAVGSGVTRVKEGDRVGIPWLYTACGCCEHCLTGWETLCESQQNTGYSVNGGYAEYVLADPNYVGIL-PKNVKATI- 147 (175)
T ss_dssp -EEEEECTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEECTTTSEEC-CTTCCCCE-
T ss_pred -EEEEeCCCccccccCCEEEeccccccCCccccccCCcccccccccccccccccccceEEEechHHEEEC-CCCCChhH-
Confidence 999999999999999999742 58999999999999999 99954432
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
++++..++.|+++++ +.+ ..+|++|||.
T Consensus 148 a~~~~~~~~t~~~~~-~~g-~~~G~~VLVl 175 (175)
T d1llua1 148 HPGKLDDINQILDQM-RAG-QIEGRIVLEM 175 (175)
T ss_dssp EEECGGGHHHHHHHH-HTT-CCSSEEEEEC
T ss_pred HHHHHhHHHHHHHHH-HhC-CCCCCEEEeC
Confidence 666778888888887 434 4479999984
|
| >d1cdoa1 b.35.1.2 (A:1-164,A:340-374) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.94 E-value=1.4e-27 Score=194.30 Aligned_cols=143 Identities=15% Similarity=0.114 Sum_probs=126.1
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
+|++||+++.++ +.| +++++.++| .++++||||||.++|||++|++.+.+......+|.++|||++| +|
T Consensus 6 ~~~~kAav~~~~--~~p----l~i~ev~~P---~p~~~eVlIkv~a~giCgsD~~~~~g~~~~~~~p~i~GhE~~G--~v 74 (199)
T d1cdoa1 6 VIKCKAAVAWEA--NKP----LVIEEIEVD---VPHANEIRIKIIATGVCHTDLYHLFEGKHKDGFPVVLGHEGAG--IV 74 (199)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHHTTCCTTSCSEECCCCEEE--EE
T ss_pred ceEEEEEEEecC--CCC----cEEEEEECC---CCCCCEEEEEEEEEEEecchhhhhhhcccccccccccccccce--EE
Confidence 578899999999 877 788876666 5589999999999999999999999877666789999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeec
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVT 112 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~ 112 (342)
+++|++++++++||||+.. |+|+||++++
T Consensus 75 ~~vG~~v~~~~~GdrV~~~~~~~cg~c~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~Ggfaey~~v~ 154 (199)
T d1cdoa1 75 ESVGPGVTEFQPGEKVIPLFISQCGECRFCQSPKTNQCVKGWANESPDVMSPKETRFTCKGRKVLQFLGTSTFSQYTVVN 154 (199)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCSCSGGGTCTTTTSCSCCCEEETTEEEEEGGGTCCSBSEEEEE
T ss_pred EEEcCCCceecCCCEEEEeeeccccccccccCCCcccccccccccccccccCcccceeeccceeecccccCCceEEEEEc
Confidence 9999999999999999742 6799999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
++.++++ |+++++. ++|++.+++.|+++++...+..+.|++|||+
T Consensus 155 ~~~~~~i-P~~~~~~-~aa~l~~~l~t~~~av~~~~~~~~G~tVlv~ 199 (199)
T d1cdoa1 155 QIAVAKI-DPSVKLD-EFITHRMPLESVNDAIDLMKHGKCIRTVLSL 199 (199)
T ss_dssp GGGEEEC-CTTSCCG-GGEEEEEEGGGHHHHHHHHHTTCCSEEEEEC
T ss_pred hHHEEEC-CCCCCHH-HHHHHHHHHHHHHHHHHHhCCCCCCCEEEeC
Confidence 9999999 9995554 3789999999999999888889999999984
|
| >d1piwa1 b.35.1.2 (A:1-152,A:321-360) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.94 E-value=1e-27 Score=193.16 Aligned_cols=147 Identities=14% Similarity=-0.002 Sum_probs=122.2
Q ss_pred CCccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCccccc
Q 019332 1 MPEMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGY 80 (342)
Q Consensus 1 m~~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~ 80 (342)
|+.|.++||+.+.++ +.. ..+++.+.+. .+++++||||||.|+|||++|++.+.|.++...+|+++|||++|
T Consensus 1 m~~P~~~ka~~~~~~--~~~--~~~~~~~~~p---~p~~~~eVlVkv~a~giC~sDl~~~~g~~~~~~~P~i~GHE~~G- 72 (192)
T d1piwa1 1 MSYPEKFEGIAIQSH--EDW--KNPKKTKYDP---KPFYDHDIDIKIEACGVCGSDIHCAAGHWGNMKMPLVVGHEIVG- 72 (192)
T ss_dssp CCTTTCEEEEEECCS--SST--TSCEEEEECC---CCCCTTEEEEEEEEEEECHHHHHHHTTTTSCCCSSEECCCCEEE-
T ss_pred CCCCceeEEEEEeCC--CcC--CcceEeeccC---CCCCCCeEEEEEeeeCCCcchHHHHcCCCCCCCCCcCccccccc-
Confidence 899999999999988 544 3456655443 26799999999999999999999999887777889999999776
Q ss_pred EEEEEecCCC-CCCCCCCEEEe--------------------------------------ccccceeEeecCCcceeecC
Q 019332 81 GVAKVLDSEN-PEFKKGDLVWG--------------------------------------MTGWEEYSLVTAPQLFKIQH 121 (342)
Q Consensus 81 g~v~~vG~~v-~~~~vGd~V~~--------------------------------------~g~~~~~~~v~~~~~~~i~p 121 (342)
+|+++|+++ +.+++||||.. .|+|+||++++++.++++ |
T Consensus 73 -~Vv~vG~~v~~~~k~GdrV~~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~G~~~~Ggfaey~~v~~~~~~~i-P 150 (192)
T d1piwa1 73 -KVVKLGPKSNSGLKVGQRVGVGAQVFSCLECDRCKNDNEPYCTKFVTTYSQPYEDGYVSQGGYANYVRVHEHFVVPI-P 150 (192)
T ss_dssp -EEEEECTTCCSSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEESSSCBCTTSCBCCCSSBSEEEEEGGGEEEC-C
T ss_pred -chhhcccccccccCCCCeeeEeeeccCCCCchhhhcCCcccccccccccccccccccccccceeeEEEeehHHeEEC-C
Confidence 999999987 67999999951 168999999999999999 9
Q ss_pred CCCCccchhhccCCc-hhhHHHhhhhhcCCCCCCEEEEec
Q 019332 122 TDVPLSYYTGILGMP-GMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 122 ~~~~~~~~~a~l~~~-~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
+++ +.+.|++.+. +.|||+++ +.++++++++|||..
T Consensus 151 ~~l--~~e~Aal~~~~~~ta~~~l-~~~~vk~g~~Vvv~~ 187 (192)
T d1piwa1 151 ENI--WVETLPVGEAGVHEAFERM-EKGDVRYRFTLVGYD 187 (192)
T ss_dssp TTC--CEEEEESSHHHHHHHHHHH-HHTCCSSEEEEECCH
T ss_pred CCC--CHHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEC
Confidence 995 4445556555 66899999 568999999999864
|
| >d2fzwa1 b.35.1.2 (A:1-162,A:339-373) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.94 E-value=2.9e-27 Score=191.75 Aligned_cols=144 Identities=16% Similarity=0.141 Sum_probs=124.5
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
.+|+|||++++++ |+| +++++.++| .++++||||||.++|||++|++++.|.+....+|+++|||++| +
T Consensus 3 ~~~~~kAav~~~~--g~~----l~i~evp~P---~p~~~eVLVkv~a~gic~sD~~~~~G~~~~~~~p~v~GhE~~G--~ 71 (197)
T d2fzwa1 3 EVIKCKAAVAWEA--GKP----LSIEEIEVA---PPKAHEVRIKIIATAVCHTDAYTLSGADPEGCFPVILGHLGAG--I 71 (197)
T ss_dssp CCEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHHTCCTTCCSSBCCCCEEEE--E
T ss_pred CceEEEEEEEccC--CCC----CEEEEEECC---CCCCCEEEEEEEEecCCCCcHHHHcCCcccccccccCCcceee--E
Confidence 3588999999999 888 788775555 5589999999999999999999999987767789999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEee
Q 019332 83 AKVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLV 111 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v 111 (342)
|+++|++|+.+++||+|+.. |+|+||+++
T Consensus 72 V~~vG~~V~~~~~GdrV~v~~~~~cg~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~g~GgfAey~vv 151 (197)
T d2fzwa1 72 VESVGEGVTKLKAGDTVIPLYIPQCGECKFCLNPKTNLCQKIRVTQGKGLMPDGTSRFTCKGKTILHYMGTSTFSEYTVV 151 (197)
T ss_dssp EEEECTTCCSCCTTCEEEECSSCCCSCSHHHHCTTCCCCCTTHHHHHTTCCTTSCCSEEETTEEEBCCTTTCCSBSEEEE
T ss_pred EEeecCCceecCCCCEEEEccccccccccccccCccccCccccccccccccCCccceeccCCcceecccccccceeEEEe
Confidence 99999999999999999741 589999999
Q ss_pred cCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 112 TAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 112 ~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
++..++++ |+++++. ++|++.+++.|++.++.....-+.+++|||+
T Consensus 152 p~~~~~~v-p~~l~~~-~aa~~~~~~~t~~~a~~~~~~g~~~~tvvvi 197 (197)
T d2fzwa1 152 ADISVAKI-DPLIKVD-EFVTHNLSFDEINKAFELMHSGKSIRTVVKI 197 (197)
T ss_dssp EGGGEEEC-CTTSCSG-GGEEEEEEGGGHHHHHHHHHHTCCSEEEEEC
T ss_pred chHHEEEC-CCCCCHH-HHhhhhhHHHHHHHHHHhccCCCcCCEEEeC
Confidence 99999999 9996555 3788999999999998665556788999884
|
| >d1xa0a1 b.35.1.2 (A:1-118,A:295-328) B. subtilis YhfP homologue {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: B. subtilis YhfP homologue species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.94 E-value=4.5e-27 Score=183.06 Aligned_cols=142 Identities=18% Similarity=0.204 Sum_probs=118.0
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGV 82 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~ 82 (342)
|.++||++++++ +++ +.++.+++|.| .++++||||||+++|||++|++.+.|.++ ...+|+++|+|++| +
T Consensus 1 m~~~KA~v~~~~--~~~----~~~~i~~v~~P-~~~~~eVlVkV~a~gin~~D~~~~~g~~~~~~~~p~v~g~e~~G--~ 71 (152)
T d1xa0a1 1 MSAFQAFVVNKT--ETE----FTAGVQTISMD-DLPEGDVLVRVHYSSVNYKDGLASIPDGKIVKTYPFVPGIDLAG--V 71 (152)
T ss_dssp CCEEEEEEEEEE--TTE----EEEEEEEEEGG-GSCSCSEEEEEEEEECCHHHHHHTSGGGSSCCSSSBCCCSEEEE--E
T ss_pred CCceEEEEEEec--CCc----eEEEEEEccCC-CCCCCEEEEEEEEeCCChHHHHHHhhcccccccccceeeeeeee--e
Confidence 356799999999 777 34444455555 45899999999999999999998888764 34678999999666 7
Q ss_pred EEEecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCC
Q 019332 83 AKVLDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQG 153 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~ 153 (342)
|++ ..++.+++||+|+.. |+|+||+.++++.++++ |++ ++.++|+++++++||+.++...++++ |
T Consensus 72 v~~--~~~~~~~~g~~v~~~~~~~~~~~~G~~aEy~~v~~~~~~~i-P~~--l~~~aa~l~~a~~ta~~~~~~~~~~~-G 145 (152)
T d1xa0a1 72 VVS--SQHPRFREGDEVIATGYEIGVTHFGGYSEYARLHGEWLVPL-PKG--LERIAQEISLAELPQALKRILRGELR-G 145 (152)
T ss_dssp EEE--CCSSSCCTTCEEEEESTTBTTTBCCSSBSEEEECGGGCEEC-CTT--HHHHEEEEEGGGHHHHHHHHHHTCCC-S
T ss_pred eec--cCCCccccCCEEEEecCccccccCCCcceeeeehhhccccC-CCC--CCHHHHHHHHHHHHHHHHHHHhcCCC-C
Confidence 765 667889999999875 78999999999999999 999 56567889999999999988888876 9
Q ss_pred CEEEEec
Q 019332 154 ECVFISA 160 (342)
Q Consensus 154 ~~vlI~g 160 (342)
++|||+|
T Consensus 146 ~tVL~l~ 152 (152)
T d1xa0a1 146 RTVVRLA 152 (152)
T ss_dssp EEEEECC
T ss_pred CEEEEcC
Confidence 9999976
|
| >d1gu7a2 c.2.1.1 (A:161-349) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.94 E-value=7.8e-27 Score=188.86 Aligned_cols=171 Identities=20% Similarity=0.291 Sum_probs=139.3
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEe-cCCcHHHHHHHHHHHHcCCEEEEEeCChh----hHHHHHHHcCCCeeE
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFIS-AASGAVGQLVGQFAKLLGCYVVGSAGSKD----KIDLLKNKFGFDEAF 203 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~-ga~g~vG~~ai~la~~~ga~Vi~~~~s~~----~~~~~~~~~g~~~v~ 203 (342)
++|+++++++|||++|.+.+++++|++|+|+ ||+|++|++++|+||.+|++||+++++.+ +.+.++ ++|+++++
T Consensus 5 ~AA~l~~~~~TA~~~l~~~~~~~~g~~vli~~ga~g~vG~~aiqlAk~~Ga~vI~~v~~~~~~~~~~~~~~-~lGad~vi 83 (189)
T d1gu7a2 5 QGATISVNPLTAYLMLTHYVKLTPGKDWFIQNGGTSAVGKYASQIGKLLNFNSISVIRDRPNLDEVVASLK-ELGATQVI 83 (189)
T ss_dssp HHHTCTTHHHHHHHHHHSSSCCCTTTCEEEESCTTSHHHHHHHHHHHHHTCEEEEEECCCTTHHHHHHHHH-HHTCSEEE
T ss_pred HHHHhhhHHHHHHHHHHHHhCCCCCCEEEEEeCCCchHHHHHHHHHhhcCCeEEEEEecccccchHHhhhh-hccccEEE
Confidence 4999999999999999888999999988886 78899999999999999999999986654 445667 89999999
Q ss_pred ecCCc--hhHHHHHHHHC---CCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceee
Q 019332 204 NYKEE--PDLNEALKRYF---PEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRM 278 (342)
Q Consensus 204 ~~~~~--~~~~~~i~~~~---~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 278 (342)
++++. .++.+.+++.+ ++++|++|||+|++.+..++++|+++|+++.+|..++. ....+...++.+++++
T Consensus 84 ~~~~~~~~~~~~~v~~~~~~~g~~vdvv~D~vg~~~~~~~~~~l~~~G~~v~~G~~~~~-----~~~~~~~~l~~k~~~i 158 (189)
T d1gu7a2 84 TEDQNNSREFGPTIKEWIKQSGGEAKLALNCVGGKSSTGIARKLNNNGLMLTYGGMSFQ-----PVTIPTSLYIFKNFTS 158 (189)
T ss_dssp EHHHHHCGGGHHHHHHHHHHHTCCEEEEEESSCHHHHHHHHHTSCTTCEEEECCCCSSC-----CEEECHHHHHHSCCEE
T ss_pred eccccchhHHHHHHHHHHhhccCCceEEEECCCcchhhhhhhhhcCCcEEEEECCccCC-----CccCcHHHHHHCCcEE
Confidence 88543 13444555543 34799999999999999999999999999999976654 3345677788899999
Q ss_pred ecceeccc----ccchHHHHHHHHHHHHcCC
Q 019332 279 EGFLVRDY----YHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 279 ~~~~~~~~----~~~~~~~~~~~~~~~~~g~ 305 (342)
.|+++..+ ++...+.++++++++++|+
T Consensus 159 ~G~~~~~~~~~~~~~~~~~~~~l~~l~~~Gk 189 (189)
T d1gu7a2 159 AGFWVTELLKNNKELKTSTLNQIIAWYEEGK 189 (189)
T ss_dssp EECCHHHHHTTCHHHHHHHHHHHHHHHHHTC
T ss_pred EEEEehHhhhhCHHHHHHHHHHHHHHHHcCC
Confidence 99877554 3444577889999998875
|
| >d1e3ja1 b.35.1.2 (A:4-142,A:313-351) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.94 E-value=1.3e-27 Score=191.51 Aligned_cols=131 Identities=15% Similarity=0.097 Sum_probs=110.3
Q ss_pred ceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC---CCccccCCCCCcccccEEEEEecCCCCCCCCCCEEE
Q 019332 24 DMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK---GSYVESFKPGMPISGYGVAKVLDSENPEFKKGDLVW 100 (342)
Q Consensus 24 ~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~g~v~~vG~~v~~~~vGd~V~ 100 (342)
++++++ +|.| +++++|||||+.++|||++|++.+.+.. ....+|+++|||++| +|+++|+++++|++||||+
T Consensus 12 ~l~~~e--~~~P-~~~~~evlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G--~Vv~vG~~v~~~~~GdrV~ 86 (178)
T d1e3ja1 12 DLRLEQ--RPIP-EPKEDEVLLQMAYVGICGSDVHYYEHGRIADFIVKDPMVIGHEASG--TVVKVGKNVKHLKKGDRVA 86 (178)
T ss_dssp EEEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSBSSSCBCCSCEECCCEEEE--EEEEECTTCCSCCTTCEEE
T ss_pred cEEEEE--eECC-CCCCCEEEEEEEEEcccCchhhhhccCccccccccCCeeeccccce--EEEecCcccCCCCCCCEEE
Confidence 466665 5555 5589999999999999999998887654 233568899999665 9999999999999999997
Q ss_pred ec-------------------------------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcC
Q 019332 101 GM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCS 149 (342)
Q Consensus 101 ~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~ 149 (342)
.. |+|+||++++++.++++ |++++.. +++++++++.|||+++ +.++
T Consensus 87 ~~~~~~~~~c~~c~~g~~~~c~~~~~~~~~~~~G~~aey~~v~~~~~~~i-P~~~~~~-~aa~~~~~~~ta~~a~-~~~~ 163 (178)
T d1e3ja1 87 VEPGVPCRRCQFCKEGKYNLCPDLTFCATPPDDGNLARYYVHAADFCHKL-PDNCNVK-QLVTHSFKLEQTVDAF-EAAR 163 (178)
T ss_dssp ECCEECCSSSHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTTCCCG-GGEEEEEEGGGHHHHH-HHHH
T ss_pred ECcccccCCccccccCCccccccccceeccccccccceeeeecccceeeC-CCCCCHH-HHHHHHhHHHHHHHHH-HHhC
Confidence 42 68999999999999999 9995444 3788889999999998 5689
Q ss_pred CCCCCEEEEecCC
Q 019332 150 PKQGECVFISAAS 162 (342)
Q Consensus 150 ~~~~~~vlI~ga~ 162 (342)
+++|++|+|+||.
T Consensus 164 ~~~g~~VlVig~C 176 (178)
T d1e3ja1 164 KKADNTIKVMISC 176 (178)
T ss_dssp HCCTTCSEEEEEC
T ss_pred CCCCCEEEEEccc
Confidence 9999999999863
|
| >d1jvba2 c.2.1.1 (A:144-313) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.94 E-value=2.2e-26 Score=183.32 Aligned_cols=163 Identities=18% Similarity=0.273 Sum_probs=146.3
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCC
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKE 207 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~ 207 (342)
++|++++++.|||+++ +..+++++++|+|+|++|++|++++|+++..|+ +|+++.++++|+++++ ++|+++++++++
T Consensus 5 eAA~l~c~~~Ta~~al-~~~~~~~g~~vlV~G~~G~vG~~~~~~~~~~g~~~V~~~~~~~~~~~~~~-~~Ga~~~i~~~~ 82 (170)
T d1jvba2 5 EAAPLTCSGITTYRAV-RKASLDPTKTLLVVGAGGGLGTMAVQIAKAVSGATIIGVDVREEAVEAAK-RAGADYVINASM 82 (170)
T ss_dssp HHGGGGTHHHHHHHHH-HHTTCCTTCEEEEETTTSHHHHHHHHHHHHHTCCEEEEEESSHHHHHHHH-HHTCSEEEETTT
T ss_pred HHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEeccccceeeeeecccccccccccccccchhhHHHHH-HcCCceeeccCC
Confidence 5899999999999999 558999999999999889999999999999996 9999999999999999 999999999998
Q ss_pred chhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 208 EPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 208 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
. ++.+++++.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...+ ...++...++.+++++.|++..+
T Consensus 83 ~-~~~~~~~~~~~~~~~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~Gs~~~~ 155 (170)
T d1jvba2 83 Q-DPLAEIRRITESKGVDAVIDLNNSEKTLSVYPKALAKQGKYVMVGLFGA------DLHYHAPLITLSEIQFVGSLVGN 155 (170)
T ss_dssp S-CHHHHHHHHTTTSCEEEEEESCCCHHHHTTGGGGEEEEEEEEECCSSCC------CCCCCHHHHHHHTCEEEECCSCC
T ss_pred c-CHHHHHHHHhhcccchhhhcccccchHHHhhhhhcccCCEEEEeccccC------ccccCHHHHHhCCcEEEEEecCC
Confidence 8 999999999877 89999999998 678999999999999999997543 23456777888999999987766
Q ss_pred cccchHHHHHHHHHHHHcCC
Q 019332 286 YYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~ 305 (342)
+++++++++++++|+
T Consensus 156 -----~~d~~~~l~lv~~GK 170 (170)
T d1jvba2 156 -----QSDFLGIMRLAEAGK 170 (170)
T ss_dssp -----HHHHHHHHHHHHTTS
T ss_pred -----HHHHHHHHHHHHcCC
Confidence 677999999999885
|
| >d1iz0a2 c.2.1.1 (A:99-269) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.94 E-value=2.4e-27 Score=188.60 Aligned_cols=144 Identities=25% Similarity=0.336 Sum_probs=119.7
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++|+++++++|||++|.+ +++++|++|||+||+|++|++++|+|+..|++|++++++++|++.++ ++|+++++|+.+.
T Consensus 5 eAA~l~~~~~TA~~al~~-~~~~~g~~VlI~ga~G~vG~~aiqlak~~G~~vi~~~~~~~~~~~~~-~lGa~~~i~~~~~ 82 (171)
T d1iz0a2 5 EAAAFPVSFLTAYLALKR-AQARPGEKVLVQAAAGALGTAAVQVARAMGLRVLAAASRPEKLALPL-ALGAEEAATYAEV 82 (171)
T ss_dssp HHHTSHHHHHHHHHHHHH-TTCCTTCEEEESSTTBHHHHHHHHHHHHTTCEEEEEESSGGGSHHHH-HTTCSEEEEGGGH
T ss_pred HHHHHHHHHHHHHHHHHH-hCCCCCCEEEEEeccccchhhhhhhhccccccccccccccccccccc-ccccceeeehhhh
Confidence 488999999999999954 89999999999999999999999999999999999999999999999 9999999998642
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY 286 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (342)
.+. .+.+ ++|++|||+| +.++.++++++++|+++.+|..++. ....+...++.+++++.++++..+
T Consensus 83 ---~~~---~~~~~g~D~v~d~~G-~~~~~~~~~l~~~G~~v~~G~~~g~-----~~~~~~~~~~~k~~~i~g~~~~~~ 149 (171)
T d1iz0a2 83 ---PER---AKAWGGLDLVLEVRG-KEVEESLGLLAHGGRLVYIGAAEGE-----VAPIPPLRLMRRNLAVLGFWLTPL 149 (171)
T ss_dssp ---HHH---HHHTTSEEEEEECSC-TTHHHHHTTEEEEEEEEEC------------CCCCTTHHHHTTCEEEECCHHHH
T ss_pred ---hhh---hhccccccccccccc-hhHHHHHHHHhcCCcEEEEeCCCCC-----CCCccHHHHHHCCcEEEEEeCcCh
Confidence 223 3334 8999999988 5789999999999999999986553 234556778899999999887664
|
| >d1gu7a1 b.35.1.2 (A:23-160,A:350-386) 2,4-dienoyl-CoA reductase {Yeast (Candida tropicalis) [TaxId: 5482]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: 2,4-dienoyl-CoA reductase species: Yeast (Candida tropicalis) [TaxId: 5482]
Probab=99.94 E-value=1.8e-29 Score=202.41 Aligned_cols=158 Identities=15% Similarity=0.124 Sum_probs=134.4
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC----------CccccCCC
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG----------SYVESFKP 73 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~----------~~~~p~~~ 73 (342)
|+++||+++.++ |+|+ +.+++++.++|.|. ++++||||||++++||++|++++.|.++ ...+|.++
T Consensus 1 m~t~kA~v~~~~--G~p~-~~l~l~~~~~p~p~-~~~~eVlVkv~a~~i~~~D~~~~~G~~~~~~~~~~~~~~~~~~~v~ 76 (175)
T d1gu7a1 1 MITAQAVLYTQH--GEPK-DVLFTQSFEIDDDN-LAPNEVIVKTLGSPVNPSDINQIQGVYPSKPAKTTGFGTTEPAAPC 76 (175)
T ss_dssp CEEEEEEEESSC--SCHH-HHCEEEEEEECTTS-CCTTEEEEEEEEEEECHHHHHHHHTCSSCCCCCBSTTCCSSCBEEC
T ss_pred CceeEEEEEccC--CCcc-cccEEEEEECCCCC-CCcCEEEEEEEEeccCcceeEEEecCcccccccccccCCCCCCccc
Confidence 468899999999 9885 66888888898884 4999999999999999999999887652 12457889
Q ss_pred CCcccccEEEEEecCCCCCCCCCCEEEec----cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhh-hc
Q 019332 74 GMPISGYGVAKVLDSENPEFKKGDLVWGM----TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYE-VC 148 (342)
Q Consensus 74 G~e~~G~g~v~~vG~~v~~~~vGd~V~~~----g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~-~~ 148 (342)
|+|++| +|+++|.++..+++||+|+.. |+|+||++++++.++++ |++ ++. .+++++..+|||+++.. .+
T Consensus 77 G~e~~g--~V~~~~~~~~~~~~g~~v~~~~~~~g~~aey~~v~~~~~~~i-P~~--~~~-~~a~~~~~~ta~~~l~~~~~ 150 (175)
T d1gu7a1 77 GNEGLF--EVIKVGSNVSSLEAGDWVIPSHVNFGTWRTHALGNDDDFIKL-PNP--AQS-KANGKPNGLTDAKSIETLYD 150 (175)
T ss_dssp CSCCEE--EEEEECTTCCSCCTTCEEEESSSCCCCSBSEEEEEGGGEEEE-CCH--HHH-HHTTCSCCCCCCCCEEEECC
T ss_pred cccccc--ccccccccccccccccceeccccccccccceeeehhhhccCC-Ccc--chh-hhhccchHHHHHHHHHHHhc
Confidence 999665 999999999999999999875 78999999999999999 997 664 45556788899999864 46
Q ss_pred CCCCCCEEEEec-CCcHHHHHHHH
Q 019332 149 SPKQGECVFISA-ASGAVGQLVGQ 171 (342)
Q Consensus 149 ~~~~~~~vlI~g-a~g~vG~~ai~ 171 (342)
++++|++|||+| |+|++|++++|
T Consensus 151 ~~~~g~~vli~gaa~~gvG~~~iQ 174 (175)
T d1gu7a1 151 GTKPLHELYQDGVANSKDGKQLIT 174 (175)
T ss_dssp SSSCHHHHHHHHHHTGGGSCEEEE
T ss_pred CCCCCCEEEEECccchhhhheEEe
Confidence 799999999998 55789998876
|
| >d1h2ba1 b.35.1.2 (A:17-154,A:327-359) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.94 E-value=7.2e-27 Score=185.44 Aligned_cols=137 Identities=15% Similarity=0.125 Sum_probs=115.8
Q ss_pred cEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC---CccccCCCCCcccccEEEE
Q 019332 8 KQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG---SYVESFKPGMPISGYGVAK 84 (342)
Q Consensus 8 ~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~---~~~~p~~~G~e~~G~g~v~ 84 (342)
||+++.++ |+| |++++ +|.|.+++++||||||.+++||++|++.+.|.++ ...+|+++|||++| +|+
T Consensus 1 kA~~~~~~--g~p----l~i~~--v~~P~~~~~~eVlVkv~a~gic~sD~~~~~g~~~~~~~~~~P~v~GhE~~G--~V~ 70 (171)
T d1h2ba1 1 KAARLHEY--NKP----LRIED--VDYPRLEGRFDVIVRIAGAGVCHTDLHLVQGMWHELLQPKLPYTLGHENVG--YIE 70 (171)
T ss_dssp CEEEESST--TSC----CEEEC--CCCCCCBTTBCEEEEEEEEECCHHHHHHHHTTTHHHHCCCSSEECCCCEEE--EEE
T ss_pred CEEEEEeC--CCC----CEEEE--eeCCCCCCCCEEEEEEEecccceeeehccCCCcccccCCccccccceeeee--eee
Confidence 78999999 888 67765 5555434789999999999999999999888662 34568999999666 999
Q ss_pred EecCCCCCCCCCCEEEec------------------------------cccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 85 VLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 85 ~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
++|++++++++||||++. |+|+||+.++.+.++++ |+++++. .++++.
T Consensus 71 ~vG~~v~~~~~GdrV~~~~~~~cg~~~~c~~g~~~~c~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~~~e-~aa~~~ 148 (171)
T d1h2ba1 71 EVAEGVEGLEKGDPVILHPAVTDGTCLACRAGEDMHCENLEFPGLNIDGGFAEFMRTSHRSVIKL-PKDVRVE-VDIHKL 148 (171)
T ss_dssp EECTTCCSCCTTCEEEECSCBCCSCSHHHHTTCGGGCTTCBCBTTTBCCSSBSEEEECGGGEEEC-CTTCCCC-EEEEEG
T ss_pred cccCCCCcCCCCCEEEEcCccCCCCcccccccccccccccccceeecccccceeeeehhhcceec-CCCCCHH-HHHHHH
Confidence 999999999999999852 68999999999999999 9995443 277788
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEE
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
+++.||++++ +.+++ .|++|||
T Consensus 149 ~~~~ta~~al-~~~~~-~G~~VlI 170 (171)
T d1h2ba1 149 DEINDVLERL-EKGEV-LGRAVLI 170 (171)
T ss_dssp GGHHHHHHHH-HTTCC-SSEEEEE
T ss_pred hHHHHHHHHH-HhcCC-CCCEEEe
Confidence 9999999999 45788 8999998
|
| >d1vj0a2 c.2.1.1 (A:156-337) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=1.3e-25 Score=180.67 Aligned_cols=166 Identities=24% Similarity=0.313 Sum_probs=138.2
Q ss_pred ccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEe
Q 019332 126 LSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFN 204 (342)
Q Consensus 126 ~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~ 204 (342)
++. +|.+.|+++|||+++.+.+++++|++|||+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|+++++|
T Consensus 3 ~~~-~a~~~c~~~ta~~al~~~~~~~~G~~VlV~Ga-G~iG~~~~~~ak~~Ga~~Vi~~~~~~~~~~~a~-~lGa~~vi~ 79 (182)
T d1vj0a2 3 LDV-LAMAMCSGATAYHAFDEYPESFAGKTVVIQGA-GPLGLFGVVIARSLGAENVIVIAGSPNRLKLAE-EIGADLTLN 79 (182)
T ss_dssp HHH-HHHHTTHHHHHHHHHHTCSSCCBTCEEEEECC-SHHHHHHHHHHHHTTBSEEEEEESCHHHHHHHH-HTTCSEEEE
T ss_pred HHH-HHHhhcHHHHHHHHHHHHhCCCCCCEEEEECC-Cccchhheecccccccccccccccccccccccc-cccceEEEe
Confidence 443 78889999999999988889999999999997 9999999999999999 8999999999999999 999999999
Q ss_pred cCCchhH---HHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccc-hHHHHhcceee
Q 019332 205 YKEEPDL---NEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHN-LMYLVTKRVRM 278 (342)
Q Consensus 205 ~~~~~~~---~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~-~~~~~~~~~~~ 278 (342)
+++. ++ .+.+.+.+++ ++|+||||+|+ ..++.++++++++|+++.+|..... ...... ...++.+++++
T Consensus 80 ~~~~-~~~~~~~~i~~~~~~~g~Dvvid~vG~~~~~~~a~~~l~~~G~iv~~G~~~~~----~~~~~~~~~~l~~k~l~i 154 (182)
T d1vj0a2 80 RRET-SVEERRKAIMDITHGRGADFILEATGDSRALLEGSELLRRGGFYSVAGVAVPQ----DPVPFKVYEWLVLKNATF 154 (182)
T ss_dssp TTTS-CHHHHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCSCC----CCEEECHHHHTTTTTCEE
T ss_pred cccc-chHHHHHHHHHhhCCCCceEEeecCCchhHHHHHHHHhcCCCEEEEEeecCCC----CccccccHHHHHHCCcEE
Confidence 9876 54 4557777877 89999999998 6789999999999999999964432 111222 34467899999
Q ss_pred ecceecccccchHHHHHHHHHHHHcC
Q 019332 279 EGFLVRDYYHLYPKFLEMIIPHIKEG 304 (342)
Q Consensus 279 ~~~~~~~~~~~~~~~~~~~~~~~~~g 304 (342)
.|++..+ .+.+++++++++++
T Consensus 155 ~G~~~~~-----~~~~~~~~~~i~~~ 175 (182)
T d1vj0a2 155 KGIWVSD-----TSHFVKTVSITSRN 175 (182)
T ss_dssp EECCCCC-----HHHHHHHHHHHHTC
T ss_pred EEEEeCC-----HHHHHHHHHHHHHC
Confidence 9987766 56677777777754
|
| >d1llua2 c.2.1.1 (A:144-309) Alcohol dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=99.93 E-value=1.2e-25 Score=178.22 Aligned_cols=162 Identities=22% Similarity=0.310 Sum_probs=139.4
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++|+++++++|||+++. .+++++|++|+|+|+ |++|++++|+|+..|++|++++++++|++.++ ++|+++++|+++.
T Consensus 5 ~aA~l~ca~~Ta~~al~-~~~~~~g~~VlV~Ga-G~vG~~~~~~ak~~G~~Vi~~~~~~~~~~~a~-~~Ga~~~i~~~~~ 81 (166)
T d1llua2 5 EIAPILCAGVTVYKGLK-QTNARPGQWVAISGI-GGLGHVAVQYARAMGLHVAAIDIDDAKLELAR-KLGASLTVNARQE 81 (166)
T ss_dssp HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEETTTS
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-cccHHHHHHHHHHcCCccceecchhhHHHhhh-ccCccccccccch
Confidence 38899999999999995 589999999999996 99999999999999999999999999999999 9999999999988
Q ss_pred hhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
++.+.+++.+.+..++++++.+++.++.++++++++|+++.+|.+.+ ....+...++.+++++.|+...+
T Consensus 82 -~~~~~~~~~~~g~~~~i~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~------~~~~~~~~~~~k~~~i~Gs~~~~--- 151 (166)
T d1llua2 82 -DPVEAIQRDIGGAHGVLVTAVSNSAFGQAIGMARRGGTIALVGLPPG------DFPTPIFDVVLKGLHIAGSIVGT--- 151 (166)
T ss_dssp -CHHHHHHHHHSSEEEEEECCSCHHHHHHHHTTEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred -hHHHHHHHhhcCCcccccccccchHHHHHHHHhcCCcEEEEEEecCC------CccCCHHHHHhCCcEEEEEeecC---
Confidence 88888888766544455544455899999999999999999997543 23567788899999999987766
Q ss_pred chHHHHHHHHHHHHcCC
Q 019332 289 LYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~ 305 (342)
+++++++++++.+|.
T Consensus 152 --~~d~~e~l~l~~~Gl 166 (166)
T d1llua2 152 --RADLQEALDFAGEGL 166 (166)
T ss_dssp --HHHHHHHHHHHHTTS
T ss_pred --HHHHHHHHHHHHCcC
Confidence 667889999998873
|
| >d1h2ba2 c.2.1.1 (A:155-326) Alcohol dehydrogenase {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=99.93 E-value=1.8e-25 Score=178.05 Aligned_cols=161 Identities=20% Similarity=0.298 Sum_probs=139.6
Q ss_pred hhhccCCchhhHHHhhhhhc-CCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecC
Q 019332 129 YTGILGMPGMTAYAGFYEVC-SPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYK 206 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~-~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~ 206 (342)
++|+++++++|||++|.+.. .+++|++|||+|+ |++|++++|+++..|+ +|++++++++|++.++ ++|++++++++
T Consensus 8 eaA~l~~~~~Ta~~al~~~~~~~~~g~~vli~Ga-G~vG~~~~~~a~~~g~~~vv~~~~~~~k~~~~~-~~ga~~~i~~~ 85 (172)
T d1h2ba2 8 EMAPLADAGITAYRAVKKAARTLYPGAYVAIVGV-GGLGHIAVQLLKVMTPATVIALDVKEEKLKLAE-RLGADHVVDAR 85 (172)
T ss_dssp HTGGGGTHHHHHHHHHHHHHTTCCTTCEEEEECC-SHHHHHHHHHHHHHCCCEEEEEESSHHHHHHHH-HTTCSEEEETT
T ss_pred HHhHHHhHHHHHHHHHHHhhhccCCCCEEEEeCC-ChHHHHHHHHHHhhcCcccccccchhHHHHHHh-hcccceeecCc
Confidence 48899999999999997765 5899999999996 9999999999999998 8888899999999999 99999999998
Q ss_pred CchhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 207 EEPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 207 ~~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
+. ..+.+.+.+.+ ++|++|||+|+ ..++.++++++++|+++.+|...+ ...+...++.+++++.|++..
T Consensus 86 ~~--~~~~~~~~~~~~g~d~vid~~g~~~~~~~a~~~l~~~G~iv~~G~~~~-------~~~~~~~l~~k~~~i~Gs~~~ 156 (172)
T d1h2ba2 86 RD--PVKQVMELTRGRGVNVAMDFVGSQATVDYTPYLLGRMGRLIIVGYGGE-------LRFPTIRVISSEVSFEGSLVG 156 (172)
T ss_dssp SC--HHHHHHHHTTTCCEEEEEESSCCHHHHHHGGGGEEEEEEEEECCCSSC-------CCCCHHHHHHTTCEEEECCSC
T ss_pred cc--HHHHHHHhhCCCCceEEEEecCcchHHHHHHHHHhCCCEEEEEeCccc-------ccCCHHHHHhCCcEEEEEEec
Confidence 74 45556667777 89999999999 679999999999999999996332 245677888999999999877
Q ss_pred ccccchHHHHHHHHHHHHcCC
Q 019332 285 DYYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~ 305 (342)
+ .++++++++++.+|+
T Consensus 157 ~-----~~d~~~~l~l~~~GK 172 (172)
T d1h2ba2 157 N-----YVELHELVTLALQGK 172 (172)
T ss_dssp C-----HHHHHHHHHHHHTTS
T ss_pred C-----HHHHHHHHHHHHcCC
Confidence 6 667889999999885
|
| >d1rjwa1 b.35.1.2 (A:1-137,A:306-339) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=4.2e-26 Score=181.62 Aligned_cols=138 Identities=16% Similarity=0.112 Sum_probs=112.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC-CCccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK-GSYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~-~~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||++++++ |+| +++++ +|.| .++++||||||+++|||++|++.+.+.. ....+|.++|||++| +|++
T Consensus 1 MkA~v~~~~--g~p----l~i~~--v~~P-~~~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~p~v~GhE~~G--~Vv~ 69 (171)
T d1rjwa1 1 MKAAVVEQF--KEP----LKIKE--VEKP-TISYGEVLVRIKACGVCHTDLHAAHGDWPVKPKLPLIPGHEGVG--IVEE 69 (171)
T ss_dssp CEEEEBSST--TSC----CEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCSCEEE--EEEE
T ss_pred CeEEEEecC--CCC----cEEEE--eECC-CCCCCeEEEEEEEeeccccceeeeecccccccccccccCCEEEE--EEEE
Confidence 699999999 877 67766 5555 4589999999999999999998887654 455678999999776 9999
Q ss_pred ecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccchhhccC
Q 019332 86 LDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILG 134 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~ 134 (342)
+|++++++++||||+.. |+|+||+++++++++++ |+++ ++++|++.
T Consensus 70 vG~~v~~~~vGdrV~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~G~~aey~~v~~~~~~~i-P~~~--~~e~A~l~ 146 (171)
T d1rjwa1 70 VGPGVTHLKVGDRVGIPWLYSACGHCDYCLSGQETLCEHQKNAGYSVDGGYAEYCRAAADYVVKI-PDNT--IIEVQPLE 146 (171)
T ss_dssp ECTTCCSCCTTCEEEECSEEECCSCSHHHHTTCGGGCTTCEEBTTTBCCSSBSEEEEEGGGCEEC-CTTC--CEEEEEGG
T ss_pred ecccccCceeeeEEeeccccccccccccccCCCccccccccccceeccCccccceEecHHHEEEC-CCCC--CHHHHHHH
Confidence 99999999999999731 68999999999999999 9994 44455553
Q ss_pred CchhhHHHhhhhhcCCCCCCEEEEecC
Q 019332 135 MPGMTAYAGFYEVCSPKQGECVFISAA 161 (342)
Q Consensus 135 ~~~~ta~~al~~~~~~~~~~~vlI~ga 161 (342)
...++++++.+ +.+ +|++|||.|-
T Consensus 147 -~~~~~~~~~~~-~~~-~G~tVlViG~ 170 (171)
T d1rjwa1 147 -KINEVFDRMLK-GQI-NGRVVLTLED 170 (171)
T ss_dssp -GHHHHHHHHHT-TCC-SSEEEEECCC
T ss_pred -HHHHHHHHHHh-cCC-CCCEEEEeCC
Confidence 45677777643 555 5999999983
|
| >d1rjwa2 c.2.1.1 (A:138-305) Alcohol dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=99.93 E-value=1.7e-25 Score=177.83 Aligned_cols=164 Identities=23% Similarity=0.292 Sum_probs=144.4
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++|+++++++|||+++. ..++++|++|||+|+ |++|++++|+++..|++|++++++++|+++++ ++|++.++++++.
T Consensus 5 eAA~l~~~~~Ta~~al~-~~~~~~g~~vlv~G~-G~iG~~a~~~a~~~g~~v~~~~~~~~r~~~~k-~~Ga~~~~~~~~~ 81 (168)
T d1rjwa2 5 EAAPIFCAGVTTYKALK-VTGAKPGEWVAIYGI-GGLGHVAVQYAKAMGLNVVAVDIGDEKLELAK-ELGADLVVNPLKE 81 (168)
T ss_dssp HHGGGGTHHHHHHHHHH-HHTCCTTCEEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCSEEECTTTS
T ss_pred HHHHHHHHHHHHHHHHH-HhCCCCCCEEEEeec-ccchhhhhHHHhcCCCeEeccCCCHHHhhhhh-hcCcceecccccc
Confidence 38899999999999995 578999999999986 99999999999999999999999999999999 9999999999998
Q ss_pred hhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
++.+.+++.+.+..|+++++.+...++.++++++++|+++.+|...+ ....+...++.+++++.++....
T Consensus 82 -~~~~~~~~~~~~~~~~v~~~~~~~~~~~a~~~l~~~G~i~~~g~~~~------~~~~~~~~~~~~~~~i~gs~~~~--- 151 (168)
T d1rjwa2 82 -DAAKFMKEKVGGVHAAVVTAVSKPAFQSAYNSIRRGGACVLVGLPPE------EMPIPIFDTVLNGIKIIGSIVGT--- 151 (168)
T ss_dssp -CHHHHHHHHHSSEEEEEESSCCHHHHHHHHHHEEEEEEEEECCCCSS------EEEEEHHHHHHTTCEEEECCSCC---
T ss_pred -hhhhhcccccCCCceEEeecCCHHHHHHHHHHhccCCceEecccccC------CCCCCHHHHHHCCcEEEEEeeCC---
Confidence 99999999887766666666555889999999999999999987554 33567788899999999987665
Q ss_pred chHHHHHHHHHHHHcCCce
Q 019332 289 LYPKFLEMIIPHIKEGKIV 307 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~~ 307 (342)
+++++++++++.+|+++
T Consensus 152 --~~~~~~~l~l~~~Gkik 168 (168)
T d1rjwa2 152 --RKDLQEALQFAAEGKVK 168 (168)
T ss_dssp --HHHHHHHHHHHHTTSCC
T ss_pred --HHHHHHHHHHHHhCCCC
Confidence 67899999999999875
|
| >d1jqba2 c.2.1.1 (A:1140-1313) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.93 E-value=1.2e-25 Score=178.77 Aligned_cols=166 Identities=18% Similarity=0.156 Sum_probs=135.0
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
++.++++++|||+++ +.+++++|++|+|+|+ |++|++++|+|+.+|+ +|++++++++|++.++ ++|+++++|+++.
T Consensus 6 A~~l~~~~~ta~~a~-~~a~~~~g~~VlI~Ga-G~vGl~~~q~ak~~Ga~~Vi~~d~~~~r~~~a~-~lGa~~~i~~~~~ 82 (174)
T d1jqba2 6 AVMITDMMTTGFHGA-ELADIEMGSSVVVIGI-GAVGLMGIAGAKLRGAGRIIGVGSRPICVEAAK-FYGATDILNYKNG 82 (174)
T ss_dssp HHTTTTHHHHHHHHH-HHTTCCTTCCEEEECC-SHHHHHHHHHHHTTTCSCEEEECCCHHHHHHHH-HHTCSEEECGGGS
T ss_pred HHHhhhHHHHHHHHH-HHhCCCCCCEEEEEcC-CcchhhhhhhhhcccccccccccchhhhHHHHH-hhCccccccccch
Confidence 667889999999998 5689999999999986 9999999999999998 8999999999999999 9999999999987
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY 286 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (342)
++.+.+++.+++ |+|++|||+|+ ..++.++++++++|+++.+|.+..... .......+....++.++.+.....
T Consensus 83 -~~~~~v~~~t~g~G~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~~~~--~~~~~~~~~~~~~~~~i~g~~~~~- 158 (174)
T d1jqba2 83 -HIEDQVMKLTNGKGVDRVIMAGGGSETLSQAVKMVKPGGIISNINYHGSGDA--LLIPRVEWGCGMAHKTIKGGLCPG- 158 (174)
T ss_dssp -CHHHHHHHHTTTSCEEEEEECSSCTTHHHHHHHHEEEEEEEEECCCCCSSSE--EEEETTTTGGGTBCCEEEEBCCCC-
T ss_pred -hHHHHHHHHhhccCcceEEEccCCHHHHHHHHHHHhcCCEEEEEeecCCCCc--CcCcHhHHHHHhCccEEEEecCCC-
Confidence 899999999988 89999999998 678999999999999999997543210 011111223344566776654432
Q ss_pred ccchHHHHHHHHHHHHcCC
Q 019332 287 YHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 287 ~~~~~~~~~~~~~~~~~g~ 305 (342)
.+..++.+.+++..|+
T Consensus 159 ---~r~~~e~l~~li~~gk 174 (174)
T d1jqba2 159 ---GRLRAERLRDMVVYNR 174 (174)
T ss_dssp ---HHHHHHHHHHHHHTTS
T ss_pred ---CcccHHHHHHHHHcCC
Confidence 2345677888888764
|
| >d1e3ia1 b.35.1.2 (A:1-167,A:342-376) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.93 E-value=1.6e-26 Score=188.76 Aligned_cols=140 Identities=16% Similarity=0.226 Sum_probs=118.2
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
+|||||++++++ |+| +++++.++| .++++||||||.++|||++|++.+.|..+ ..+|+++|||++| +|
T Consensus 6 ~~~~KAaV~~~~--g~p----l~i~evp~P---~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~v~GHE~~G--~V 73 (202)
T d1e3ia1 6 VIKCKAAIAWKT--GSP----LCIEEIEVS---PPKACEVRIQVIATCVCPTDINATDPKKK-ALFPVVLGHECAG--IV 73 (202)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHTTCTTSC-CCSSBCCCCEEEE--EE
T ss_pred eEEEEEEEEccC--CCC----CEEEEEECC---CCCCCEEEEEEEEEEEeccccceeeeecc-cccccccccccce--EE
Confidence 579999999999 887 678775555 45899999999999999999999998654 4568999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec-------------------------------------------------------ccccee
Q 019332 84 KVLDSENPEFKKGDLVWGM-------------------------------------------------------TGWEEY 108 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~-------------------------------------------------------g~~~~~ 108 (342)
+++|++|+++++||||++. |+|+||
T Consensus 74 ~~vG~~V~~~~~GdrV~~~~~~~c~~c~~c~~g~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~g~~v~~~~~~G~faey 153 (202)
T d1e3ia1 74 ESVGPGVTNFKPGDKVIPFFAPQCKRCKLCLSPLTNLCGKLRNFKYPTIDQELMEDRTSRFTCKGRSIYHFMGVSSFSQY 153 (202)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCCCSSCGGGSSCSCTTSCCSEEETTEEEBCCTTTCCSBSE
T ss_pred eeecCCceeccCCCEEEEEeeccccccccccCCcccccccccccccCccceecccccccccccCceeeecccccCCceEE
Confidence 9999999999999999742 679999
Q ss_pred EeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 109 SLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 109 ~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
+++++..++++ |+++++. .++++.+++.+++.++.. +++|++|.|..
T Consensus 154 ~~v~~~~l~~l-P~~~~~~-~~~~~~~~~~~~~~a~~~---~k~G~~V~vi~ 200 (202)
T d1e3ia1 154 TVVSEANLARV-DDEFDLD-LLVTHALPFESINDAIDL---MKEGKSIRTIL 200 (202)
T ss_dssp EEEEGGGEEEC-CTTSCGG-GGEEEEEEGGGHHHHHHH---HHTTCCSEEEE
T ss_pred EEEehhhEEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh---CCCCCEEEEEE
Confidence 99999999999 9995554 277888888888888843 57899987764
|
| >d1iz0a1 b.35.1.2 (A:1-98,A:270-302) Quinone oxidoreductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Quinone oxidoreductase species: Thermus thermophilus [TaxId: 274]
Probab=99.93 E-value=3.8e-26 Score=172.17 Aligned_cols=127 Identities=17% Similarity=0.150 Sum_probs=107.4
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
||||++.++ |+| +++++. |.| .++++||+||++++|||++|++.+.|.+. ...+|+++|||++| +|
T Consensus 1 MkA~~~~~~--G~~----l~~~e~--~~p-~p~~~eVlVkv~a~gin~~D~~~~~G~~~~~~~~P~v~G~E~~G--~V-- 67 (131)
T d1iz0a1 1 MKAWVLKRL--GGP----LELVDL--PEP-EAEEGEVVLRVEAVGLNFADHLMRLGAYLTRLHPPFIPGMEVVG--VV-- 67 (131)
T ss_dssp CEEEEECST--TSC----EEEEEC--CCC-CCCTTEEEEEEEEEEECHHHHHHHHTCSSSCCCSSBCCCCEEEE--EE--
T ss_pred CcEEEEccC--CCC----CEEEEc--cCC-CCCCCEEEEEEEEEeccccccccccccccccccceeEeeeeeEE--ee--
Confidence 699999999 877 677654 445 45899999999999999999999998764 34689999999766 77
Q ss_pred ecCCCCCCCCCCEEEec---cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEe
Q 019332 86 LDSENPEFKKGDLVWGM---TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFIS 159 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ 159 (342)
+||+|+++ |+|+||+.++++.++++ |++++.. ++|++++.+.|||++|.+.+ +.|++||+.
T Consensus 68 ---------vGd~V~~~~~~G~~aey~~v~~~~~~~~-P~~~~~~-~aa~~~~~~~Ta~~al~~~g--~~g~tvl~l 131 (131)
T d1iz0a1 68 ---------EGRRYAALVPQGGLAERVAVPKGALLPL-PEGRPVV-GPVFPFAEAEAAFRALLDRG--HTGKVVVRL 131 (131)
T ss_dssp ---------TTEEEEEECSSCCSBSEEEEEGGGCEEC-CTTCCCE-EEEEEGGGHHHHHHHTTCTT--CCBEEEEEC
T ss_pred ---------ccceEEEEeccCccceeeeeCHHHeEEc-cCCCCHH-HHHHHHHHHHHHHHHHHhcc--cCCCEEEEC
Confidence 49999988 89999999999999999 9995554 38889999999999997655 569999873
|
| >d1f8fa1 b.35.1.2 (A:4-162,A:337-371) Benzyl alcohol dehydrogenase {Acinetobacter calcoaceticus [TaxId: 471]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Benzyl alcohol dehydrogenase species: Acinetobacter calcoaceticus [TaxId: 471]
Probab=99.93 E-value=1.1e-25 Score=181.78 Aligned_cols=140 Identities=14% Similarity=0.049 Sum_probs=109.6
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|++|+|.++.+. ++| |++++.++| .++++||||||.++|||++|++.+.|.++ ..+|+++|||++| +|
T Consensus 1 ~k~~~Aav~~~~--g~~----l~l~~v~~P---~p~~geVlVkv~a~gic~sD~~~~~G~~~-~~~P~i~GHE~~G--~V 68 (194)
T d1f8fa1 1 LKDIIAAVTPCK--GAD----FELQALKIR---QPQGDEVLVKVVATGMCHTDLIVRDQKYP-VPLPAVLGHEGSG--II 68 (194)
T ss_dssp CEEEEEEEBCST--TCC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCEEEE--EE
T ss_pred CceeEEEEEcCC--CCC----cEEEEeeCC---CCCCCEEEEEEEEEEecCchHhhhhhccc-ccCCcccccceEE--Ee
Confidence 467899999998 777 788776665 55899999999999999999999998764 4579999999777 99
Q ss_pred EEecCCCCCCCCCCEEEec----------------------------------------------------cccceeEee
Q 019332 84 KVLDSENPEFKKGDLVWGM----------------------------------------------------TGWEEYSLV 111 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~----------------------------------------------------g~~~~~~~v 111 (342)
+++|+++++|++||||+.. |+|+||+++
T Consensus 69 ~~vG~~v~~~~vGDrVv~~~~~Cg~C~~C~~g~~~~C~~~~~~~~~g~~~dg~~~~~~~~~~~~~~~~~~~g~fae~~~v 148 (194)
T d1f8fa1 69 EAIGPNVTELQVGDHVVLSYGYCGKCTQCNTGNPAYCSEFFGRNFSGADSEGNHALCTHDQGVVNDHFFAQSSFATYALS 148 (194)
T ss_dssp EEECTTCCSCCTTCEEEECCCCCSSSHHHHTTCGGGCTTHHHHSSSSSCSSSCCSBC------CBCCGGGTCCSBSEEEE
T ss_pred eecCccceeEccCceeeeecccccCChhhhCCCcccccccccceeccccccceeeeecCCceeeccccccccccceeEEE
Confidence 9999999999999999642 245666666
Q ss_pred cCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCE-EEEE
Q 019332 112 TAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCY-VVGS 183 (342)
Q Consensus 112 ~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~ 183 (342)
+...++++ |+++ + .++.+++.| +|++|++++|+++.+|++ |+++
T Consensus 149 ~~~~~~~i-p~~i--~------------------------~~~~~~i~g-~g~~g~~aiq~a~~~g~~~iiaV 193 (194)
T d1f8fa1 149 RENNTVKV-TKDF--P------------------------FDQLVKFYA-FDEINQAAIDSRKGITLKPIIKI 193 (194)
T ss_dssp EGGGEEEE-CTTC--C------------------------GGGGEEEEE-GGGHHHHHHHHHHTSCSEEEEEC
T ss_pred ehHHEEEC-CCCC--C------------------------cccEEEEeC-cHHHHHHHHHHHHHcCCCEEEEe
Confidence 66666666 5552 2 123344555 599999999999999995 5443
|
| >d1vj0a1 b.35.1.2 (A:2-155,A:338-367) Hypothetical protein TM0436 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0436 species: Thermotoga maritima [TaxId: 2336]
Probab=99.93 E-value=9.6e-26 Score=179.99 Aligned_cols=138 Identities=13% Similarity=0.144 Sum_probs=114.0
Q ss_pred ccccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 3 EMVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 3 ~~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
|.+++||+++.++ ++| +++++.++| .++++||||||.++|||++|++.+.|..+...+|+++|||++| +
T Consensus 1 m~~k~kA~v~~~~--~~p----l~i~ev~~P---~~~~~evlVkv~a~gIC~sD~~~~~G~~~~~~~P~vlGHE~~G--~ 69 (184)
T d1vj0a1 1 MGLKAHAMVLEKF--NQP----LVYKEFEIS---DIPRGSILVEILSAGVCGSDVHMFRGEDPRVPLPIILGHEGAG--R 69 (184)
T ss_dssp CCEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTCEEEEEEEEEECHHHHHHHTTCCTTCCSSBCCCCEEEE--E
T ss_pred CCceEEEEEEecC--CCC----cEEEEeeCC---CCCCCEEEEEEEEECCCCCchhheeccCCccccccccceeeee--e
Confidence 3458899999999 877 688765555 5589999999999999999999999987666789999999666 9
Q ss_pred EEEecCCCC-----CCCCCCEEEe---------------------------------------ccccceeEeec-CCcce
Q 019332 83 AKVLDSENP-----EFKKGDLVWG---------------------------------------MTGWEEYSLVT-APQLF 117 (342)
Q Consensus 83 v~~vG~~v~-----~~~vGd~V~~---------------------------------------~g~~~~~~~v~-~~~~~ 117 (342)
|+++|++|+ ++++||+|+. .|+|+||++++ ...++
T Consensus 70 V~~vG~~v~~~~~~~~~~Gd~V~~~~~~~Cg~C~~C~~g~~~~~c~~~~~~G~~~~~~~~~~~~Gg~ae~~~v~~~~~v~ 149 (184)
T d1vj0a1 70 VVEVNGEKRDLNGELLKPGDLIVWNRGITCGECYWCKVSKEPYLCPNRKVYGINRGCSEYPHLRGCYSSHIVLDPETDVL 149 (184)
T ss_dssp EEEESSCCBCTTSCBCCTTCEEEECSEECCSSSHHHHTSCCGGGCTTCEETTTTCCSSSTTCCCSSSBSEEEECTTCCEE
T ss_pred eeEEeccccccccccccceeeeEeccccccccChhHhCccccccCCCceeeccCCCCCCCCCcceeCcCcEEechhHcEE
Confidence 999999986 4689999973 15899999996 46899
Q ss_pred eecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 118 KIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 118 ~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
++ |++ ++++ .++.+|++++ +.+++++|++|||+.
T Consensus 150 ~i-p~~--l~~~-----~pl~~A~~a~-~~~~~~~G~~VlI~~ 183 (184)
T d1vj0a1 150 KV-SEK--ITHR-----LPLKEANKAL-ELMESREALKVILYP 183 (184)
T ss_dssp EE-CTT--CCEE-----EEGGGHHHHH-HHHHHTSCSCEEEEC
T ss_pred EC-CCC--CCHH-----HHHHHHHHHH-HHhCCCcCCEEEEee
Confidence 99 998 4432 1456888888 568899999999974
|
| >d1p0fa2 c.2.1.1 (A:1164-1337) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.92 E-value=2.3e-24 Score=171.47 Aligned_cols=167 Identities=18% Similarity=0.198 Sum_probs=133.3
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCC
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKE 207 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~ 207 (342)
++|.+.|.+.|||+++.+.+++++|++|||+|+ |++|++++|+|++.|+ +|++++++++|+++++ ++|+++++|+++
T Consensus 4 eaa~lgCa~~Ta~~a~~~~a~~~~G~~VlV~Ga-GgvGl~a~~~ak~~G~~~Vi~~d~~~~kl~~a~-~lGa~~~i~~~~ 81 (174)
T d1p0fa2 4 ESCLIGCGFATGYGAAVNTAKVTPGSTCAVFGL-GGVGFSAIVGCKAAGASRIIGVGTHKDKFPKAI-ELGATECLNPKD 81 (174)
T ss_dssp GGGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred HHHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceeeccCChHHHHHHHH-HcCCcEEEcCCC
Confidence 488999999999999888899999999999996 9999999999999998 8999999999999999 999999999876
Q ss_pred chh-HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhh-CCEEEEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 208 EPD-LNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKI-HGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 208 ~~~-~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~-~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
..+ ..+..+..+++++|++|||+|+ ..+..++..+++ +|+++.+|..... .....+.. .+.++.++.|+.+.
T Consensus 82 ~d~~~~~~~~~~~~~G~d~vid~~g~~~~~~~~~~~~~~~~G~~v~vG~~~~~----~~~~~~~~-~~~~~~~i~Gs~~G 156 (174)
T d1p0fa2 82 YDKPIYEVICEKTNGGVDYAVECAGRIETMMNALQSTYCGSGVTVVLGLASPN----ERLPLDPL-LLLTGRSLKGSVFG 156 (174)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECCCCCTT----CCEEECTH-HHHTTCEEEECSGG
T ss_pred chhHHHHHHHHhcCCCCcEEEEcCCCchHHHHHHHHHHHhcCceEEEEEecCc----cccccCHH-HHhCCCEEEEEEeC
Confidence 412 4445555555699999999999 678888888876 5999999975432 11122223 34467888888765
Q ss_pred ccccchHHHHHHHHHHHHcCC
Q 019332 285 DYYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~ 305 (342)
+.. .+++.++++++.+|+
T Consensus 157 ~~~---~~d~~~lidl~~~gK 174 (174)
T d1p0fa2 157 GFK---GEEVSRLVDDYMKKK 174 (174)
T ss_dssp GCC---GGGHHHHHHHHHTTS
T ss_pred CCC---HHHHHHHHHHHHcCC
Confidence 532 346788888888875
|
| >d2fzwa2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.92 E-value=2.9e-24 Score=171.90 Aligned_cols=168 Identities=20% Similarity=0.239 Sum_probs=134.6
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
+|.++|++.|||+++.+.+++++|++|||+|+ |++|++++|+++.+|+ +|++++++++|+++++ ++|+++++|+.+.
T Consensus 6 aa~l~ca~~Tay~al~~~~~~~~G~tVlI~Ga-GGvG~~aiq~ak~~G~~~vi~~~~~~~k~~~ak-~lGa~~~i~~~~~ 83 (176)
T d2fzwa2 6 VCLLGCGISTGYGAAVNTAKLEPGSVCAVFGL-GGVGLAVIMGCKVAGASRIIGVDINKDKFARAK-EFGATECINPQDF 83 (176)
T ss_dssp HGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGC
T ss_pred HhHhhcHHHHHHHHHHHhhCCCCCCEEEEecc-hhHHHHHHHHHHHHhcCceEEEcccHHHHHHHH-HhCCcEEEeCCch
Confidence 88999999999999988899999999999997 8999999999999997 8889999999999999 9999999988642
Q ss_pred -hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc
Q 019332 209 -PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY 286 (342)
Q Consensus 209 -~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (342)
.+..+.+++.+++++|++||++|+ ..++.+..+++++|+++.++..... ..........+.++.++.|+...+.
T Consensus 84 ~~~~~~~~~~~~~~g~D~vid~~G~~~~~~~~~~~~~~g~~~~~v~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~~ 159 (176)
T d2fzwa2 84 SKPIQEVLIEMTDGGVDYSFECIGNVKVMRAALEACHKGWGVSVVVGVAAS----GEEIATRPFQLVTGRTWKGTAFGGW 159 (176)
T ss_dssp SSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGGC
T ss_pred hhHHHHHHHHHcCCCCcEeeecCCCHHHHHHHHHhhcCCceeEEEEeeccc----cccccccHHHHHCCCEEEEEeeeCC
Confidence 145566666666699999999998 6778888999999888776543322 1122233344557788888876553
Q ss_pred ccchHHHHHHHHHHHHcCC
Q 019332 287 YHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 287 ~~~~~~~~~~~~~~~~~g~ 305 (342)
.. .+++.++++++++|+
T Consensus 160 ~~--~~d~~~li~l~~~GK 176 (176)
T d2fzwa2 160 KS--VESVPKLVSEYMSKK 176 (176)
T ss_dssp CH--HHHHHHHHHHHHTTS
T ss_pred cH--HHHHHHHHHHHHcCC
Confidence 22 567888999998875
|
| >d1e3ia2 c.2.1.1 (A:168-341) Alcohol dehydrogenase {Mouse (Mus musculus), class II [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Mouse (Mus musculus), class II [TaxId: 10090]
Probab=99.92 E-value=1.6e-24 Score=171.98 Aligned_cols=165 Identities=15% Similarity=0.168 Sum_probs=132.1
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
+|.+.|.+.|+|+++.+.+++++|++|+|+|+ |++|++++|+++..|+ +|++++.+++|+++++ ++|++++++++..
T Consensus 6 aa~l~Ca~~T~~~a~~~~a~v~~G~~VlV~G~-G~iGl~a~~~ak~~Ga~~Vi~~d~~~~r~~~a~-~~Ga~~~i~~~~~ 83 (174)
T d1e3ia2 6 VCLIGCGFSSGYGAAINTAKVTPGSTCAVFGL-GCVGLSAIIGCKIAGASRIIAIDINGEKFPKAK-ALGATDCLNPREL 83 (174)
T ss_dssp HGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGGC
T ss_pred HHHhhhHHHHHHHHHHHhhCCCCCCEEEEECC-ChHHHHHHHHHHHhCCceeeeeccchHHHHHHH-HhCCCcccCCccc
Confidence 88999999999999988899999999999986 9999999999999999 7999999999999999 9999999987643
Q ss_pred hhHHHHHHHHC-CCCccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 209 PDLNEALKRYF-PEGIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 209 ~~~~~~i~~~~-~~~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
.+..+.+.+.+ ++++|++|||+|. ..++.++++++++ |+++.+|.+.+. ...+...++. +.++.|+...+
T Consensus 84 ~~~~~~~~~~~~~~G~d~vie~~G~~~~~~~a~~~~~~g~G~~v~vG~~~~~------~~i~~~~~~~-~k~i~Gs~~Gs 156 (174)
T d1e3ia2 84 DKPVQDVITELTAGGVDYSLDCAGTAQTLKAAVDCTVLGWGSCTVVGAKVDE------MTIPTVDVIL-GRSINGTFFGG 156 (174)
T ss_dssp SSCHHHHHHHHHTSCBSEEEESSCCHHHHHHHHHTBCTTTCEEEECCCSSSE------EEEEHHHHHT-TCEEEECSGGG
T ss_pred hhhhhhhHhhhhcCCCcEEEEecccchHHHHHHHHhhcCCeEEEecCCCCCc------cccchHHHhc-cCEEEEEEeeC
Confidence 13444444444 4499999999999 7899999999996 999999975442 2334444433 45676665544
Q ss_pred cccchHHHHHHHHHHHHcCC
Q 019332 286 YYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~ 305 (342)
+. ..+++.++++++++|+
T Consensus 157 ~~--~~~d~p~li~l~~~GK 174 (174)
T d1e3ia2 157 WK--SVDSVPNLVSDYKNKK 174 (174)
T ss_dssp CC--HHHHHHHHHHHHHTTS
T ss_pred CC--hHHHHHHHHHHHHCcC
Confidence 32 2567888888888875
|
| >d1uufa2 c.2.1.1 (A:145-312) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.92 E-value=1.1e-24 Score=172.75 Aligned_cols=159 Identities=21% Similarity=0.277 Sum_probs=131.9
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
+|++.|++.|+|++| +.+++++|++|+|+|+ |++|++++|+|+.+|+++++++++++|+++++ ++|++.++|+.+.
T Consensus 9 ~Apl~Cag~Tay~al-~~~~~~~G~~VlI~Ga-G~vG~~a~qlak~~Ga~~i~~~~~~~~~~~a~-~lGad~~i~~~~~- 84 (168)
T d1uufa2 9 VAPLLCAGITTYSPL-RHWQAGPGKKVGVVGI-GGLGHMGIKLAHAMGAHVVAFTTSEAKREAAK-ALGADEVVNSRNA- 84 (168)
T ss_dssp HGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSGGGHHHHH-HHTCSEEEETTCH-
T ss_pred HHHHHhHHHHHHHHH-HHhCCCCCCEEEEecc-chHHHHHHHHhhcccccchhhccchhHHHHHh-ccCCcEEEECchh-
Confidence 778899999999999 5689999999999996 99999999999999999999999999999999 9999999999875
Q ss_pred hHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccccc
Q 019332 210 DLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYH 288 (342)
Q Consensus 210 ~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 288 (342)
+.... ..+++|++|||+|+ ..+..++++++++|+++.+|...+. ........++.+++++.|+....
T Consensus 85 ~~~~~----~~~~~D~vid~~g~~~~~~~~~~~l~~~G~iv~~G~~~~~-----~~~~~~~~l~~k~~~i~Gs~~~~--- 152 (168)
T d1uufa2 85 DEMAA----HLKSFDFILNTVAAPHNLDDFTTLLKRDGTMTLVGAPATP-----HKSPEVFNLIMKRRAIAGSMIGG--- 152 (168)
T ss_dssp HHHHT----TTTCEEEEEECCSSCCCHHHHHTTEEEEEEEEECCCC------------CHHHHHTTTCEEEECCSCC---
T ss_pred hHHHH----hcCCCceeeeeeecchhHHHHHHHHhcCCEEEEeccCCCC-----cccccHHHHHHCCcEEEEEeecC---
Confidence 33221 12379999999998 6799999999999999999975543 23446677788999999987766
Q ss_pred chHHHHHHHHHHHHcCCc
Q 019332 289 LYPKFLEMIIPHIKEGKI 306 (342)
Q Consensus 289 ~~~~~~~~~~~~~~~g~~ 306 (342)
.++++++++++.++++
T Consensus 153 --~~d~~e~l~l~a~~~I 168 (168)
T d1uufa2 153 --IPETQEMLDFCAEHGI 168 (168)
T ss_dssp --HHHHHHHHHHHHHHTC
T ss_pred --HHHHHHHHHHHHHcCC
Confidence 6778889998887653
|
| >d1piwa2 c.2.1.1 (A:153-320) Cinnamyl alcohol dehydrogenase, ADH6 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Cinnamyl alcohol dehydrogenase, ADH6 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=99.92 E-value=3.5e-25 Score=175.62 Aligned_cols=160 Identities=21% Similarity=0.177 Sum_probs=134.5
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCch
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEP 209 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~ 209 (342)
+|++.|++.|||+++. .+++++|++|+|+|+ |++|++++|+|+.+|++|++++++++|++.++ ++|+++++++.+..
T Consensus 6 AApl~cag~Ta~~al~-~~~~~~g~~vlI~Ga-G~vG~~a~q~ak~~G~~vi~~~~~~~k~~~a~-~lGa~~~i~~~~~~ 82 (168)
T d1piwa2 6 AAPLLCGGLTVYSPLV-RNGCGPGKKVGIVGL-GGIGSMGTLISKAMGAETYVISRSSRKREDAM-KMGADHYIATLEEG 82 (168)
T ss_dssp HGGGGTHHHHHHHHHH-HTTCSTTCEEEEECC-SHHHHHHHHHHHHHTCEEEEEESSSTTHHHHH-HHTCSEEEEGGGTS
T ss_pred HHHHHHHHHHHHHHHH-HhCcCCCCEEEEECC-CCcchhHHHHhhhccccccccccchhHHHHhh-ccCCcEEeeccchH
Confidence 7899999999999995 579999999999997 99999999999999999999999999999999 99999999986541
Q ss_pred hHHHHHHHHCCCCccEEEeCCChh---hHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceeccc
Q 019332 210 DLNEALKRYFPEGIDIYFENVGGK---MLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDY 286 (342)
Q Consensus 210 ~~~~~i~~~~~~~~d~vid~~g~~---~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 286 (342)
++. +...+++|.++||+++. .+..++++++++|+++.+|...+. ...+...++.+++++.|+...+
T Consensus 83 ~~~----~~~~~~~d~vi~~~~~~~~~~~~~~~~~l~~~G~iv~~G~~~~~------~~~~~~~~~~k~~~i~Gs~~g~- 151 (168)
T d1piwa2 83 DWG----EKYFDTFDLIVVCASSLTDIDFNIMPKAMKVGGRIVSISIPEQH------EMLSLKPYGLKAVSISYSALGS- 151 (168)
T ss_dssp CHH----HHSCSCEEEEEECCSCSTTCCTTTGGGGEEEEEEEEECCCCCSS------CCEEECGGGCBSCEEEECCCCC-
T ss_pred HHH----HhhhcccceEEEEecCCccchHHHHHHHhhccceEEEecccccc------ccccHHHHHhCCcEEEEEeeCC-
Confidence 332 23334799999998863 467899999999999999975442 2345566788999999987766
Q ss_pred ccchHHHHHHHHHHHHcCCce
Q 019332 287 YHLYPKFLEMIIPHIKEGKIV 307 (342)
Q Consensus 287 ~~~~~~~~~~~~~~~~~g~~~ 307 (342)
++.++++++++.+|+++
T Consensus 152 ----~~~~~e~l~li~~gkIk 168 (168)
T d1piwa2 152 ----IKELNQLLKLVSEKDIK 168 (168)
T ss_dssp ----HHHHHHHHHHHHHTTCC
T ss_pred ----HHHHHHHHHHHHhCCCC
Confidence 67889999999999875
|
| >d1e3ja2 c.2.1.1 (A:143-312) Ketose reductase (sorbitol dehydrogenase) {Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Silverleaf whitefly (Bemisia argentifolii) [TaxId: 77855]
Probab=99.91 E-value=7.7e-24 Score=168.38 Aligned_cols=164 Identities=18% Similarity=0.231 Sum_probs=132.7
Q ss_pred cchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecC
Q 019332 127 SYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYK 206 (342)
Q Consensus 127 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~ 206 (342)
+++.|++..++++||+++ +.+++++|++|+|+|+ |++|++++|+|+..|++|++++++++|++.++ ++|++.+++++
T Consensus 2 S~e~Aal~ePla~a~~a~-~~~~~~~g~~vlV~G~-G~vG~~~~~~ak~~Ga~vi~v~~~~~r~~~a~-~~ga~~~~~~~ 78 (170)
T d1e3ja2 2 SLEEGALLEPLSVGVHAC-RRAGVQLGTTVLVIGA-GPIGLVSVLAAKAYGAFVVCTARSPRRLEVAK-NCGADVTLVVD 78 (170)
T ss_dssp CHHHHHTHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHH-HTTCSEEEECC
T ss_pred CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEEcc-cccchhhHhhHhhhcccccccchHHHHHHHHH-HcCCcEEEecc
Confidence 345566777899999999 5578999999999984 99999999999999999999999999999999 99998766554
Q ss_pred Cc----hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecc
Q 019332 207 EE----PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGF 281 (342)
Q Consensus 207 ~~----~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
.. .+..+.+++..++++|++|||+|+ ..++.++++++++|+++.+|.+.+ ....+...++.+++++.++
T Consensus 79 ~~~~~~~~~~~~~~~~~g~g~D~vid~~g~~~~~~~a~~~~~~~G~iv~~G~~~~------~~~~~~~~~~~k~i~i~gs 152 (170)
T d1e3ja2 79 PAKEEESSIIERIRSAIGDLPNVTIDCSGNEKCITIGINITRTGGTLMLVGMGSQ------MVTVPLVNACAREIDIKSV 152 (170)
T ss_dssp TTTSCHHHHHHHHHHHSSSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCSS------CCCCCHHHHHTTTCEEEEC
T ss_pred ccccccchhhhhhhcccccCCceeeecCCChHHHHHHHHHHhcCCceEEEecCCC------CCCcCHHHHHHCCCEEEEE
Confidence 31 134455666666689999999999 678999999999999999997654 2345677888999999987
Q ss_pred eecccccchHHHHHHHHHHHHcCC
Q 019332 282 LVRDYYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~g~ 305 (342)
+... +.++++++++++|+
T Consensus 153 ~~~~------~~~~~ai~li~~Gk 170 (170)
T d1e3ja2 153 FRYC------NDYPIALEMVASGR 170 (170)
T ss_dssp CSCS------SCHHHHHHHHHTTS
T ss_pred ECCH------HHHHHHHHHHHcCC
Confidence 5332 24667788888875
|
| >d1pl8a2 c.2.1.1 (A:146-316) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=2.9e-24 Score=170.92 Aligned_cols=165 Identities=18% Similarity=0.230 Sum_probs=136.8
Q ss_pred cchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEec
Q 019332 127 SYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNY 205 (342)
Q Consensus 127 ~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~ 205 (342)
+++.|++..++++||+++ +.+++++|++|+|+|+ |++|++++|+|+..|+ +|++++++++|+++++ ++|+++++++
T Consensus 2 S~e~Aal~epla~a~~a~-~~~~~~~gd~VlI~G~-G~iG~~~~~~a~~~G~~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~ 78 (171)
T d1pl8a2 2 TFEEGALIEPLSVGIHAC-RRGGVTLGHKVLVCGA-GPIGMVTLLVAKAMGAAQVVVTDLSATRLSKAK-EIGADLVLQI 78 (171)
T ss_dssp CHHHHHHHHHHHHHHHHH-HHHTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCSEEEEC
T ss_pred CHHHHHHHHHHHHHHHHH-HHhCCCCCCEEEEECC-CccHHHHHHHHHHcCCceEEeccCCHHHHHHHH-HhCCcccccc
Confidence 345566778899999999 4589999999999997 9999999999999999 8999999999999999 9999999988
Q ss_pred CCchhHHHHHHHH---CCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecc
Q 019332 206 KEEPDLNEALKRY---FPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGF 281 (342)
Q Consensus 206 ~~~~~~~~~i~~~---~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 281 (342)
.+. +..+..+.. .+.++|++|||+|+ ..++.++++++++|+++.+|.+... ...+...++.+++++.|+
T Consensus 79 ~~~-~~~~~~~~~~~~~g~g~Dvvid~~G~~~~~~~a~~~~~~gG~iv~~G~~~~~------~~~~~~~~~~k~l~i~Gs 151 (171)
T d1pl8a2 79 SKE-SPQEIARKVEGQLGCKPEVTIECTGAEASIQAGIYATRSGGTLVLVGLGSEM------TTVPLLHAAIREVDIKGV 151 (171)
T ss_dssp SSC-CHHHHHHHHHHHHTSCCSEEEECSCCHHHHHHHHHHSCTTCEEEECSCCCSC------CCCCHHHHHHTTCEEEEC
T ss_pred ccc-ccccccccccccCCCCceEEEeccCCchhHHHHHHHhcCCCEEEEEecCCCC------CccCHHHHHHCCcEEEEE
Confidence 776 655444433 23389999999998 6789999999999999999976542 345678888999999987
Q ss_pred eecccccchHHHHHHHHHHHHcCCce
Q 019332 282 LVRDYYHLYPKFLEMIIPHIKEGKIV 307 (342)
Q Consensus 282 ~~~~~~~~~~~~~~~~~~~~~~g~~~ 307 (342)
+.. .+.++++++++++|++.
T Consensus 152 ~~~------~~~~~~al~li~~gkid 171 (171)
T d1pl8a2 152 FRY------CNTWPVAISMLASKSVN 171 (171)
T ss_dssp CSC------SSCHHHHHHHHHTTSCC
T ss_pred eCC------HhHHHHHHHHHHcCCCC
Confidence 532 23467889999999873
|
| >d1jvba1 b.35.1.2 (A:1-143,A:314-347) Alcohol dehydrogenase {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=99.91 E-value=1.5e-24 Score=173.31 Aligned_cols=136 Identities=21% Similarity=0.179 Sum_probs=108.7
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC--------CccccCCCCCccc
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG--------SYVESFKPGMPIS 78 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~--------~~~~p~~~G~e~~ 78 (342)
|||+++.++ |+| +++++. |.| .++++|||||+.++|||++|++++.|.++ ...+|+++|||++
T Consensus 1 MKA~~~~~~--G~p----l~i~dv--~~P-~p~~~eVlVkv~a~gic~~D~~~~~G~~~~~~~~~~~~~~~P~v~GhE~~ 71 (177)
T d1jvba1 1 MRAVRLVEI--GKP----LSLQEI--GVP-KPKGPQVLIKVEAAGVCHSDVHMRQGRFGNLRIVEDLGVKLPVTLGHEIA 71 (177)
T ss_dssp CEEEEECST--TSC----CEEEEC--CCC-CCCTTCEEEEEEEEEECTHHHHHTTTEETTEETTTTTCCCSCEECCCEEE
T ss_pred CeEEEEEeC--CCC----CEEEEe--eCC-CCCCCEEEEEEEEEecccceeeeecCcccccccccccccCCCccccceEE
Confidence 699999999 888 677664 445 45899999999999999999999998642 2357899999977
Q ss_pred ccEEEEEecCCCCCCCCCCEEEec------------------------------cccceeEeecCCc-ceeecCCCCCcc
Q 019332 79 GYGVAKVLDSENPEFKKGDLVWGM------------------------------TGWEEYSLVTAPQ-LFKIQHTDVPLS 127 (342)
Q Consensus 79 G~g~v~~vG~~v~~~~vGd~V~~~------------------------------g~~~~~~~v~~~~-~~~i~p~~~~~~ 127 (342)
| +|+++|++++++++||+|++. |+|+||+.++... ++++ |+. ..
T Consensus 72 G--~V~~~g~~v~~~~~GdrV~~~~~~~c~~c~~~~~g~~~~c~~~~~~g~~~~G~~aey~~vp~~~~~~~~-~~~--~~ 146 (177)
T d1jvba1 72 G--KIEEVGDEVVGYSKGDLVAVNPWQGEGNCYYCRIGEEHLCDSPRWLGINFDGAYAEYVIVPHYKYMYKL-RRV--KP 146 (177)
T ss_dssp E--EEEEECTTCCSCCTTCEEEECCEECCSSSHHHHTTCGGGCSSCEEBTTTBCCSSBSEEEESCGGGEEEC-SSS--CC
T ss_pred E--EEeeeccCccccccCceEeeeeccccccccccccccccccCCcceeeeccccccccEEEEEhHHeEEEC-CCC--Ch
Confidence 6 999999999999999999752 6899999998776 5555 664 22
Q ss_pred chhh-ccCCchhhHHHhhhhhcCCCCCCEEEE
Q 019332 128 YYTG-ILGMPGMTAYAGFYEVCSPKQGECVFI 158 (342)
Q Consensus 128 ~~~a-~l~~~~~ta~~al~~~~~~~~~~~vlI 158 (342)
.+++ .+..++.+|++++ +..++ .|++|||
T Consensus 147 ~~~a~~~~~~~~~a~~~~-~~~~~-~G~~VlI 176 (177)
T d1jvba1 147 MITKTMKLEEANEAIDNL-ENFKA-IGRQVLI 176 (177)
T ss_dssp CCEEEEEGGGHHHHHHHH-HTTCC-CSEEEEE
T ss_pred HHHHHHHHHHHHHHHHHH-Hhhcc-cCCceEC
Confidence 2344 4456888999998 44565 5899987
|
| >d1tt7a2 c.2.1.1 (A:128-294) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.91 E-value=1.8e-25 Score=175.81 Aligned_cols=142 Identities=23% Similarity=0.319 Sum_probs=117.0
Q ss_pred chhhHHHh---hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 136 PGMTAYAG---FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 136 ~~~ta~~a---l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
+++|||.+ |.+.+...++++|||+||+|++|.+++|+|+.+|++|++++++++|.++++ ++|++.++++++ ...
T Consensus 4 aGlTA~~a~~~L~~~g~~~~~~~VLV~gaaGgVG~~avQlAk~~Ga~Viat~~s~~k~~~~~-~lGad~vi~~~~--~~~ 80 (167)
T d1tt7a2 4 AGFTAALSVHRLEQNGLSPEKGSVLVTGATGGVGGIAVSMLNKRGYDVVASTGNREAADYLK-QLGASEVISRED--VYD 80 (167)
T ss_dssp HHHHHHHHHHHHHHTTCCGGGCCEEEESTTSHHHHHHHHHHHHHTCCEEEEESSSSTHHHHH-HHTCSEEEEHHH--HCS
T ss_pred hHHHHHHHHHHHHHhcCCCCCCEEEEeCCcchHHHHHHHHHHHcCCceEEEecCHHHHHHHH-hhcccceEeccc--hhc
Confidence 45677654 545566778889999999999999999999999999999999999999999 999999988753 222
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 213 EALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
+.++...++++|++||++|++.+..++++|+++|+++.+|..++. ....+...++.+++++.|.....
T Consensus 81 ~~~~~~~~~gvd~vid~vgg~~~~~~~~~l~~~G~iv~~G~~~g~-----~~~~~~~~l~~k~~~i~G~~~~~ 148 (167)
T d1tt7a2 81 GTLKALSKQQWQGAVDPVGGKQLASLLSKIQYGGSVAVSGLTGGG-----EVPATVYPFILRGVSLLGIDSVY 148 (167)
T ss_dssp SCCCSSCCCCEEEEEESCCTHHHHHHHTTEEEEEEEEECCCSSCS-----CEEECSHHHHTSCCEEEECCSSS
T ss_pred hhhhcccCCCceEEEecCcHHHHHHHHHHhccCceEEEeeccCCC-----cccCCHHHHHHCCcEEEEEecCC
Confidence 233333334899999999999999999999999999999987764 34567788899999999975543
|
| >d1pl8a1 b.35.1.2 (A:1-145,A:317-356) Ketose reductase (sorbitol dehydrogenase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Ketose reductase (sorbitol dehydrogenase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=99.91 E-value=1.2e-24 Score=174.95 Aligned_cols=140 Identities=16% Similarity=0.110 Sum_probs=110.5
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCC---CCccccCCCCCcccccE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIK---GSYVESFKPGMPISGYG 81 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~---~~~~~p~~~G~e~~G~g 81 (342)
..++|++++.+ +++++++ +|.| .++++||||||.++|||++|++.+.+.. ....+|+++|||++|
T Consensus 6 p~~~a~V~~gp-------~~l~l~e--vp~P-~p~~~eVlVkv~a~gic~sD~~~~~~~~~~~~~~~~p~i~GhE~~G-- 73 (185)
T d1pl8a1 6 PNNLSLVVHGP-------GDLRLEN--YPIP-EPGPNEVLLRMHSVGICGSDVHYWEYGRIGNFIVKKPMVLGHEASG-- 73 (185)
T ss_dssp CCCEEEEEEET-------TEEEEEE--CCCC-CCCTTEEEEEEEEEEECHHHHHHHHHSEETTEECSSCEECCCEEEE--
T ss_pred CCCEEEEEeCC-------CeEEEEE--eECC-CCCCCEEEEEEEEEEeeCchhhhhccccccccCCCCCeeeeeeeee--
Confidence 35689999976 3456655 5556 4589999999999999999999887643 234568899999776
Q ss_pred EEEEecCCCCCCCCCCEEEec-------------------------------cccceeEeecCCcceeecCCCCCccchh
Q 019332 82 VAKVLDSENPEFKKGDLVWGM-------------------------------TGWEEYSLVTAPQLFKIQHTDVPLSYYT 130 (342)
Q Consensus 82 ~v~~vG~~v~~~~vGd~V~~~-------------------------------g~~~~~~~v~~~~~~~i~p~~~~~~~~~ 130 (342)
+|+++|+++++|++||||+.. |+|+||++++.++++++ |++ ++++.
T Consensus 74 ~V~~vG~~v~~~~~GdrV~~~~~~~cg~c~~c~~G~~~~c~~~~~~g~~~~~G~~aey~~~~~~~~~~l-P~~--~~~~~ 150 (185)
T d1pl8a1 74 TVEKVGSSVKHLKPGDRVAIEPGAPRENDEFCKMGRYNLSPSIFFCATPPDDGNLCRFYKHNAAFCYKL-PDN--VKPLV 150 (185)
T ss_dssp EEEEECTTCCSCCTTCEEEECSEECSSCCHHHHTTCGGGCTTCEETTBTTBCCSCBSEEEEEGGGEEEC-CTT--CGGGE
T ss_pred eEEEeccceeeecccccceecceeccccchhhccchhchhccceeeecccccccceEEEEEchHHEEEC-CCC--CCHHH
Confidence 999999999999999999742 56999999999999999 999 45443
Q ss_pred hccCCchhhHHHhhhhhcCCCCCCEEEEecC
Q 019332 131 GILGMPGMTAYAGFYEVCSPKQGECVFISAA 161 (342)
Q Consensus 131 a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga 161 (342)
+++ .++.+|++++ +..+++.|++|||..+
T Consensus 151 aa~-~pl~~a~~a~-~~~~~~~G~~VlIg~G 179 (185)
T d1pl8a1 151 THR-FPLEKALEAF-ETFKKGLGLKIMLKCD 179 (185)
T ss_dssp EEE-EEGGGHHHHH-HHHHTTCCSEEEEECC
T ss_pred HHH-HHHHHHHHHH-HHhCCCCCCEEEEEeC
Confidence 322 3566788887 4567899999999443
|
| >d1o89a2 c.2.1.1 (A:116-292) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.91 E-value=3e-25 Score=176.25 Aligned_cols=162 Identities=22% Similarity=0.287 Sum_probs=128.3
Q ss_pred hhhccCCchhhHHHhhh---hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEec
Q 019332 129 YTGILGMPGMTAYAGFY---EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNY 205 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~---~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~ 205 (342)
++|+++++++|||++++ +.+....+++|||+||+|++|.+++|+||.+|++||+++++++|.+.++ ++|+++++||
T Consensus 5 ~Aa~lg~aGlTA~~a~~~l~~~g~~~~~~~vlV~gasGGVG~~aiQlAk~~Ga~Via~~~~~~k~~~~~-~lGad~vi~~ 83 (177)
T d1o89a2 5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGASRVLPR 83 (177)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTEEEEEEG
T ss_pred HHHHcccHHHHHHHHHHHHHHhCCCCCCCcEEEEEccccchHHHHHHHHHcCCCeEEEecchhHHHHHH-hhcccccccc
Confidence 48999999999998764 3344456679999999999999999999999999999999999999999 9999999999
Q ss_pred CCchhHHHHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 206 KEEPDLNEALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
++. ++.+. +.+...|.++|++|++.+..++++++++|+++.+|..++. ....+...++.+++++.|+....
T Consensus 84 ~~~-~~~~~---l~~~~~~~vvD~Vgg~~~~~~l~~l~~~Griv~~G~~~~~-----~~~~~~~~~~~k~~~i~G~~~~~ 154 (177)
T d1o89a2 84 DEF-AESRP---LEKQVWAGAIDTVGDKVLAKVLAQMNYGGCVAACGLAGGF-----TLPTTVMPFILRNVRLQGVDSVM 154 (177)
T ss_dssp GGS-SSCCS---SCCCCEEEEEESSCHHHHHHHHHTEEEEEEEEECCCTTCS-----CCCCCSHHHHHHCCEEEECCSSS
T ss_pred ccH-HHHHH---HHhhcCCeeEEEcchHHHHHHHHHhccccceEeecccCCc-----cccccHHHHHHCCCeEEEEeccc
Confidence 875 44322 2333689999999999999999999999999999987664 23445677888999999975543
Q ss_pred c-ccchHHHHHHHHHH
Q 019332 286 Y-YHLYPKFLEMIIPH 300 (342)
Q Consensus 286 ~-~~~~~~~~~~~~~~ 300 (342)
. ++...+.++++.+.
T Consensus 155 ~~~~~~~~~~~~L~~~ 170 (177)
T d1o89a2 155 TPPERRAQAWQRLVAD 170 (177)
T ss_dssp CCHHHHHHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHh
Confidence 2 33333344444433
|
| >d2jhfa2 c.2.1.1 (A:164-339) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.91 E-value=2.1e-23 Score=166.71 Aligned_cols=169 Identities=19% Similarity=0.204 Sum_probs=132.2
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCC
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKE 207 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~ 207 (342)
++|.++|+++|||+++.+.+++++|++|||+|+ |++|++++++++..|+ +|++++++++|.+.++ ++|+++++++.+
T Consensus 5 ~aa~l~ca~~Tay~al~~~~~vk~GdtVlV~Ga-GG~G~~~~~~~~~~g~~~Vi~~~~~~~k~~~a~-~~Ga~~~i~~~~ 82 (176)
T d2jhfa2 5 KVCLIGCGFSTGYGSAVKVAKVTQGSTCAVFGL-GGVGLSVIMGCKAAGAARIIGVDINKDKFAKAK-EVGATECVNPQD 82 (176)
T ss_dssp HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCSEEECGGG
T ss_pred HHhHhhcHHHHHHHHHHHhhCCCCCCEEEEECC-CCcHHHHHHHHHHcCCceEEeecCcHHHHHHHH-HhCCeeEEecCC
Confidence 389999999999999988899999999999998 8999999999999987 9999999999999999 999999888754
Q ss_pred chh-HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 208 EPD-LNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 208 ~~~-~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
..+ ..+.++...++++|++||++|. ..++.++.+++++|..+.++..... ..........+.++.++.|+...+
T Consensus 83 ~~~~~~~~~~~~~~~G~D~vid~~G~~~~~~~a~~~~~~~~g~~~~~~~~~~----~~~~~~~~~~~~~~~~i~Gs~~G~ 158 (176)
T d2jhfa2 83 YKKPIQEVLTEMSNGGVDFSFEVIGRLDTMVTALSCCQEAYGVSVIVGVPPD----SQNLSMNPMLLLSGRTWKGAIFGG 158 (176)
T ss_dssp CSSCHHHHHHHHTTSCBSEEEECSCCHHHHHHHHHHBCTTTCEEEECSCCCT----TCCEEECTHHHHTTCEEEECSGGG
T ss_pred chhHHHHHHHHHhcCCCCEEEecCCchhHHHHHHHHHhcCCcceEEecCCCC----cccccccHHHHhCCCEEEEEEEeC
Confidence 313 4444555555599999999998 6778889999887555544443221 122223345666899999987654
Q ss_pred cccchHHHHHHHHHHHHcCC
Q 019332 286 YYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~g~ 305 (342)
+ ..++++.++++++.+|+
T Consensus 159 ~--~~~~~~~~li~~~~~GK 176 (176)
T d2jhfa2 159 F--KSKDSVPKLVADFMAKK 176 (176)
T ss_dssp C--CHHHHHHHHHHHHHTTS
T ss_pred C--CHHHHHHHHHHHHHCcC
Confidence 3 22567888889988875
|
| >d1d1ta2 c.2.1.1 (A:163-338) Alcohol dehydrogenase {Human (Homo sapiens), different isozymes [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Human (Homo sapiens), different isozymes [TaxId: 9606]
Probab=99.90 E-value=2.4e-23 Score=165.69 Aligned_cols=165 Identities=17% Similarity=0.177 Sum_probs=130.1
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
+|.++|.+.|+|+++.+.+++++|++|+|+|+ |++|+.++|+++.+|+ +|++++.+++|+++++ ++|+++++|+++.
T Consensus 7 aa~l~Ca~~T~~~Av~~~~~~~~g~tVlI~G~-GgvGl~ai~~ak~~G~~~Vi~vd~~~~kl~~Ak-~~GA~~~in~~~~ 84 (176)
T d1d1ta2 7 VCLIGCGFSTGYGAAVKTGKVKPGSTCVVFGL-GGVGLSVIMGCKSAGASRIIGIDLNKDKFEKAM-AVGATECISPKDS 84 (176)
T ss_dssp HGGGGTHHHHHHHHHHTTSCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HHTCSEEECGGGC
T ss_pred HHhhhhHHHHHHHHHHHhhCCCCCCEEEEECC-CchhHHHHHHHHHcCCceEEEecCcHHHHHHHH-hcCCcEEECcccc
Confidence 88999999999999988899999999999997 9999999999999997 9999999999999999 9999999998765
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhC-CEEEEEceeccccCCCCccccchHHHHhcceeeecceecc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIH-GRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRD 285 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~-G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 285 (342)
.+..+.+.+.+.+ |+|++||++|+ ..+..++.++.++ |+++.+|.+... .....+.. .+.++.++.|+...+
T Consensus 85 ~~~~~~~~~~~~g~G~d~vi~~~g~~~~~~~a~~~~~~~~G~~v~vG~~~~~----~~~~~~~~-~~~~~~~i~Gs~~G~ 159 (176)
T d1d1ta2 85 TKPISEVLSEMTGNNVGYTFEVIGHLETMIDALASCHMNYGTSVVVGVPPSA----KMLTYDPM-LLFTGRTWKGCVFGG 159 (176)
T ss_dssp SSCHHHHHHHHHTSCCCEEEECSCCHHHHHHHHTTSCTTTCEEEECSCCCTT----CCEEECTH-HHHTTCEEEECSGGG
T ss_pred chHHHHHHHHhccccceEEEEeCCchHHHHHHHHHhhcCCeEEEEEEccccc----cccCCCHH-HHhCCCEEEEEEEeC
Confidence 2345666666655 99999999999 5677777777665 999999975442 11122223 344577888876654
Q ss_pred cccchHHHHHHHHHHHHc
Q 019332 286 YYHLYPKFLEMIIPHIKE 303 (342)
Q Consensus 286 ~~~~~~~~~~~~~~~~~~ 303 (342)
.. .++++.++++++.+
T Consensus 160 ~~--~~~dip~li~~~~~ 175 (176)
T d1d1ta2 160 LK--SRDDVPKLVTEFLA 175 (176)
T ss_dssp CC--HHHHHHHHHHHHTT
T ss_pred CC--cHHHHHHHHHHHhC
Confidence 32 15667777766543
|
| >d1cdoa2 c.2.1.1 (A:165-339) Alcohol dehydrogenase {Cod (Gadus callarias) [TaxId: 8053]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Alcohol dehydrogenase species: Cod (Gadus callarias) [TaxId: 8053]
Probab=99.90 E-value=4.2e-23 Score=164.83 Aligned_cols=167 Identities=15% Similarity=0.157 Sum_probs=132.9
Q ss_pred hhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCC
Q 019332 129 YTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKE 207 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~ 207 (342)
++|.++|++.|+|+++.+.+++++|++|+|+|+ |++|+.++++++..|+ +|++++++++|++.++ ++|+++++|+++
T Consensus 5 ~aa~l~ca~~Tay~a~~~~a~~k~g~~VlI~G~-Gg~g~~~~~~~~~~g~~~Vi~~~~~~~rl~~a~-~~GAd~~in~~~ 82 (175)
T d1cdoa2 5 TVCLLGCGVSTGFGAAVNTAKVEPGSTCAVFGL-GAVGLAAVMGCHSAGAKRIIAVDLNPDKFEKAK-VFGATDFVNPND 82 (175)
T ss_dssp HHGGGGTHHHHHHHHHHTTTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEECSCGGGHHHHH-HTTCCEEECGGG
T ss_pred HHHHhhcHHHHHHHHHHHhhCCCCCCEEEEEec-CCccchHHHHHHHHhhchheeecchHHHHHHHH-HcCCcEEEcCCC
Confidence 388999999999999988899999999999996 9999999999998888 8999999999999999 999999999876
Q ss_pred chhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEE-EEEceeccccCCCCccccchHHHHhcceeeecceec
Q 019332 208 EPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRI-AVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVR 284 (342)
Q Consensus 208 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~-v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 284 (342)
..+..+++++.+.+ ++|++||++|+ ..+..+..+++++|.+ +..+.... .........+.++.++.|+...
T Consensus 83 ~~~~~~~~~~~~~~~G~d~vid~~G~~~~~~~a~~~~~~g~~~~~~~g~~~~------~~~~~~~~~~~~~~~i~Gs~~G 156 (175)
T d1cdoa2 83 HSEPISQVLSKMTNGGVDFSLECVGNVGVMRNALESCLKGWGVSVLVGWTDL------HDVATRPIQLIAGRTWKGSMFG 156 (175)
T ss_dssp CSSCHHHHHHHHHTSCBSEEEECSCCHHHHHHHHHTBCTTTCEEEECSCCSS------SCEEECHHHHHTTCEEEECSGG
T ss_pred cchhHHHHHHhhccCCcceeeeecCCHHHHHHHHHHhhCCCcceeEEEecCC------cccCccHHHHHCCcEEEEEEEe
Confidence 52445566666555 99999999998 6778888888777554 44544332 2233445556678889888665
Q ss_pred ccccchHHHHHHHHHHHHcCC
Q 019332 285 DYYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 285 ~~~~~~~~~~~~~~~~~~~g~ 305 (342)
++. .++++.++++++.+|+
T Consensus 157 ~~~--~~~d~~~~i~l~~~gK 175 (175)
T d1cdoa2 157 GFK--GKDGVPKMVKAYLDKK 175 (175)
T ss_dssp GCC--HHHHHHHHHHHHHTTS
T ss_pred CCc--HHHHHHHHHHHHHcCC
Confidence 532 3678888999998875
|
| >d1kola1 b.35.1.2 (A:2-160,A:356-397) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.90 E-value=1.6e-26 Score=187.46 Aligned_cols=154 Identities=18% Similarity=0.107 Sum_probs=120.1
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccC----CCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQV----PKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGV 82 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~----~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~ 82 (342)
+||++++.+ + ++++++.+.|... .++++||+|||.+++||++|++++.|..+ ..+|+++|||++| +
T Consensus 2 ~kA~v~~~~--~-----~le~~e~~~P~~~~p~~~p~~~eVlVkv~a~giC~sDl~~~~G~~~-~~~P~v~GHE~~G--~ 71 (201)
T d1kola1 2 NRGVVYLGS--G-----KVEVQKIDYPKMQDPRGKKIEHGVILKVVSTNICGSDQHMVRGRTT-AQVGLVLGHEITG--E 71 (201)
T ss_dssp EEEEEEEET--T-----EEEEEEECCCCSBCTTSCBCSSCEEEEEEEEECCHHHHHHHTTCSC-CCTTCBCCCCEEE--E
T ss_pred cEEEEEeCC--C-----ceEEEEecCCcccCCCCCCCCCEEEEEEEEEEEcchhhhhhcCCcc-cccceeccceeee--e
Confidence 689999988 3 4677666555321 12579999999999999999999998754 4578999999776 9
Q ss_pred EEEecCCCCCCCCCCEEEec----------------------------------------cccceeEeecCC--cceeec
Q 019332 83 AKVLDSENPEFKKGDLVWGM----------------------------------------TGWEEYSLVTAP--QLFKIQ 120 (342)
Q Consensus 83 v~~vG~~v~~~~vGd~V~~~----------------------------------------g~~~~~~~v~~~--~~~~i~ 120 (342)
|+++|++|++|++||||... |+|+||+++|.. .++++
T Consensus 72 Vv~vG~~V~~~~vGdrV~v~~~~~Cg~C~~C~~g~~~~~~~~~~~~~~~~~g~~~~~~~~Gg~aeyv~vp~~~~~l~~i- 150 (201)
T d1kola1 72 VIEKGRDVENLQIGDLVSVPFNVACGRCRSCKEMHTGVCLTVNPARAGGAYGYVDMGDWTGGQAEYVLVPYADFNLLKL- 150 (201)
T ss_dssp EEEECTTCCSCCTTCEEECCSEECCSSSHHHHTTCGGGCSSSCSSSSCEEBTCTTSCCBCCCSBSEEEESSHHHHCEEC-
T ss_pred eeccccccccccccceeEEeeeeeccCChhhhCCCcccccccccccccccccccCCCccccccccEEEeehHHCeEEEC-
Confidence 99999999999999999621 689999999864 59999
Q ss_pred CCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC
Q 019332 121 HTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC 178 (342)
Q Consensus 121 p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga 178 (342)
|++. ++.+++++..++.++++++.. .+.+.++ +| +|++|++++|.||++||
T Consensus 151 Pd~~-~~~~~~~~~~~~~~~~~a~~~-~~~~~g~----~g-~G~vG~~~i~~ak~~GA 201 (201)
T d1kola1 151 PDRD-KAMEKINIAEVVGVQVISLDD-APRGYGE----FD-AGVPKKFVIDPHKTFSA 201 (201)
T ss_dssp SCHH-HHHHTCCHHHHHTEEEECGGG-HHHHHHH----HH-HTCSCEEEECTTCSSCC
T ss_pred CCCC-ChHHHHHHHHHHHHHHHHHHh-CCCCCeE----Ee-eCHHHHHHHHHHHHcCC
Confidence 9862 232466677777888888743 4444443 46 49999999999999886
|
| >d1kola2 c.2.1.1 (A:161-355) Formaldehyde dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Formaldehyde dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=99.90 E-value=8e-23 Score=165.21 Aligned_cols=167 Identities=19% Similarity=0.197 Sum_probs=136.0
Q ss_pred hhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCc
Q 019332 130 TGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEE 208 (342)
Q Consensus 130 ~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~ 208 (342)
.++|+..+.|||+++ +.+++++|++|||+|+ |++|++++++|+..|+ +|++++++++|++.++ ++|+++++++.+.
T Consensus 4 ~~~l~d~~~ta~~a~-~~a~v~~G~tVlV~Ga-G~vGl~a~~~ak~~ga~~Vi~~d~~~~rl~~a~-~~Ga~~~~~~~~~ 80 (195)
T d1kola2 4 LTCLSDILPTGYHGA-VTAGVGPGSTVYVAGA-GPVGLAAAASARLLGAAVVIVGDLNPARLAHAK-AQGFEIADLSLDT 80 (195)
T ss_dssp HGGGGTHHHHHHHHH-HHTTCCTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEESCHHHHHHHH-HTTCEEEETTSSS
T ss_pred HHhcccHHHHHHHHH-HHhCCCCCCEEEEECc-CHHHHHHHHHHHhhcccceeeecccchhhHhhh-hccccEEEeCCCc
Confidence 678889999999998 5689999999999996 9999999999999999 8999999999999999 9999999999888
Q ss_pred hhHHHHHHHHCCC-CccEEEeCCCh----------------hhHHHHHHhhhhCCEEEEEceeccccCC-------CCcc
Q 019332 209 PDLNEALKRYFPE-GIDIYFENVGG----------------KMLDAVLLNMKIHGRIAVCGMISQYNLD-------RPEG 264 (342)
Q Consensus 209 ~~~~~~i~~~~~~-~~d~vid~~g~----------------~~~~~~~~~l~~~G~~v~~g~~~~~~~~-------~~~~ 264 (342)
++.+.+.+++++ ++|++|||+|. +.++.++++++++|+++.+|.+.+.... ....
T Consensus 81 -~~~~~i~~~t~g~g~D~vid~vG~~~~~~~~~~~~~~~~~~~l~~~~~~~r~gG~v~~~G~~~~~~~~~~~~~~~~~~~ 159 (195)
T d1kola2 81 -PLHEQIAALLGEPEVDCAVDAVGFEARGHGHEGAKHEAPATVLNSLMQVTRVAGKIGIPGLYVTEDPGAVDAAAKIGSL 159 (195)
T ss_dssp -CHHHHHHHHHSSSCEEEEEECCCTTCBCSSTTGGGSBCTTHHHHHHHHHEEEEEEEEECSCCCSCCTTCSSHHHHTTCC
T ss_pred -CHHHHHHHHhCCCCcEEEEECccccccCCcccceeecCcHHHHHHHHHHHhcCCEEEEeeecCCCcccchhhhhhcCce
Confidence 999999999988 99999999984 4789999999999999999975432110 0111
Q ss_pred ccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCC
Q 019332 265 VHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGK 305 (342)
Q Consensus 265 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~ 305 (342)
...+..++.+++++.+... ..+++++++++++.+++
T Consensus 160 ~~~~~~~~~k~~~i~~g~~-----~v~~~~~~Ll~~I~~~k 195 (195)
T d1kola2 160 SIRFGLGWAKSHSFHTGQT-----PVMKYNRALMQAIMWDR 195 (195)
T ss_dssp CCCHHHHHHTTCEEEESSC-----CHHHHHHHHHHHHHTTS
T ss_pred eeeHHHHHhhcceeccCCC-----chHHHHHHHHHHHHcCC
Confidence 2334456677777654222 22566788888887764
|
| >d1o89a1 b.35.1.2 (A:1-115,A:293-323) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.89 E-value=2.1e-23 Score=160.29 Aligned_cols=125 Identities=14% Similarity=0.093 Sum_probs=100.8
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEEEE
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVAKV 85 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v~~ 85 (342)
|||+++.++ +++ ..+++++ ++.| +++++||+|||.|+|||++|.....|.++ ...+|+++|+|++| +|++
T Consensus 1 MkA~v~~~~--~~~--~~l~i~~--v~~p-~~~~geVlVkV~a~gin~~D~~~~~G~~~~~~~~p~v~G~e~~G--~V~~ 71 (146)
T d1o89a1 1 LQALLLEQQ--DGK--TLASVQT--LDES-RLPEGDVTVDVHWSSLNYKDALAITGKGKIIRNFPMIPGIDFAG--TVRT 71 (146)
T ss_dssp CEEEEEECC-------CEEEEEE--CCGG-GSCSCSEEEEEEEEECCHHHHHHHHTCSSCCCSSSBCCCSEEEE--EEEE
T ss_pred CeEEEEEcC--CCc--eEEEEEE--cCCC-CCCCCEEEEEEeeccCccceeeEEEeecccccccceeccccccc--ccee
Confidence 699999999 877 3445554 5555 55899999999999999999998888763 34678999999666 9988
Q ss_pred ecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhh
Q 019332 86 LDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGF 144 (342)
Q Consensus 86 vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al 144 (342)
+|. +.+++||+|+.. |+|+||+.++++.++++ |+++++. ++|+++++++||+.++
T Consensus 72 ~~~--~~~~~g~~v~~~~~~~g~~~~G~~Aey~~v~~~~vv~l-P~~ls~~-eAA~l~~a~~tA~~~~ 135 (146)
T d1o89a1 72 SED--PRFHAGQEVLLTGWGVGENHWGGLAEQARVKGDWLVAM-PQGQAAK-EISLSEAPNFAEAIIN 135 (146)
T ss_dssp ECS--TTCCTTCEEEEECTTBTTTBCCSSBSEEEECGGGCEEC-CTTSCCE-EECGGGHHHHHHHHHT
T ss_pred ecc--CCccceeeEEeecccceecCCCcceeeeeeeeeeEEEC-CCCCCHH-HHHHHHHHHHHHHHHH
Confidence 766 479999999863 78999999999999999 9995555 3888988888887666
|
| >d1tt7a1 b.35.1.2 (A:2-127,A:295-330) Hypothetical protein YhfP {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YhfP species: Bacillus subtilis [TaxId: 1423]
Probab=99.89 E-value=3.4e-25 Score=174.21 Aligned_cols=147 Identities=16% Similarity=0.142 Sum_probs=119.0
Q ss_pred ccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCC-CccccCCCCCcccccEEE
Q 019332 5 VRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKG-SYVESFKPGMPISGYGVA 83 (342)
Q Consensus 5 ~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~-~~~~p~~~G~e~~G~g~v 83 (342)
.++||++++++ |.+ ..+++++ ++.| .++++||||||+|+|||++|++.+.|.++ ...+|.++|+|++| +|
T Consensus 2 ~~~ka~~~~~~--g~~--~~l~~~~--v~~p-~l~~~eVLVkV~a~gin~~D~~~~~g~~~~~~~~~~~~g~e~~G--~v 72 (162)
T d1tt7a1 2 TLFQALQAEKN--ADD--VSVHVKT--ISTE-DLPKDGVLIKVAYSGINYKDGLAGKAGGNIVREYPLILGIDAAG--TV 72 (162)
T ss_dssp CEEEEEEECCG--GGS--CCCEEEE--EESS-SSCSSSEEEEECCEEECHHHHHHTSTTCTTCSSCSEECCSEEEE--EE
T ss_pred CcEEEEEEEec--CCC--eEEEEEE--cCCC-CCCCCEEEEEEEEecccchhhheeeecccccccceeeeeeeccc--cc
Confidence 46899999999 766 3456655 5555 55899999999999999999998888764 34567899999776 77
Q ss_pred EEecCCCCCCCCCCEEEec---------cccceeEeecCCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCC
Q 019332 84 KVLDSENPEFKKGDLVWGM---------TGWEEYSLVTAPQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGE 154 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------g~~~~~~~v~~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~ 154 (342)
.+ +.++++++||+|+.. |+|+||+.++++.++++ |+++++. +||+++..++|||.++.. .+...++
T Consensus 73 ~~--~~~~~~~~g~~v~~~~~~~g~~~~G~~aey~~v~~~~l~~i-P~~ls~~-~Aa~~~~~~~ta~~~~~~-~~~~~~~ 147 (162)
T d1tt7a1 73 VS--SNDPRFAEGDEVIATSYELGVSRDGGLSEYASVPGDWLVPL-PQNLSLK-EAMVDQLLTIVDREVSLE-ETPGALK 147 (162)
T ss_dssp EE--CSSTTCCTTCEEEEESTTBTTTBCCSSBSSEEECGGGEEEC-CTTCCHH-HHHHSCSTTSEEEEECST-THHHHHH
T ss_pred cc--ccccccccceeeEeeeccceeccccccceEEEecHHHEEEC-CCCCCHH-HHHHHHHHHHHHHHHHHh-cCCCCCC
Confidence 55 667889999999864 79999999999999999 9995444 388999999999988744 4456668
Q ss_pred EEEEecCCcHH
Q 019332 155 CVFISAASGAV 165 (342)
Q Consensus 155 ~vlI~ga~g~v 165 (342)
+|||+|++|++
T Consensus 148 ~Vli~ga~G~v 158 (162)
T d1tt7a1 148 DILQNRIQGRV 158 (162)
T ss_dssp HTTTTCCSSEE
T ss_pred EEEEECCcceE
Confidence 89999987754
|
| >d2jhfa1 b.35.1.2 (A:1-163,A:340-374) Alcohol dehydrogenase {Horse (Equus caballus) [TaxId: 9796]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Horse (Equus caballus) [TaxId: 9796]
Probab=99.89 E-value=1.2e-23 Score=171.03 Aligned_cols=140 Identities=15% Similarity=0.158 Sum_probs=110.2
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
.++|||+++.++ ++| +++++.+.| .++++||||||.++|||++|++.+.|.++ ..+|+++|||++| +|
T Consensus 6 ~~k~KAavl~~~--~~~----l~i~ev~~P---~p~~~eVlVkV~a~giC~sDl~~~~G~~~-~~~P~i~GHE~~G--~V 73 (198)
T d2jhfa1 6 VIKCKAAVLWEE--KKP----FSIEEVEVA---PPKAHEVRIKMVATGICRSDDHVVSGTLV-TPLPVIAGHEAAG--IV 73 (198)
T ss_dssp CEEEEEEEBCST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHHTSSC-CCSSBCCCCSEEE--EE
T ss_pred ceEEEEEEEecC--CCC----CEEEEEECC---CCCCCEEEEEEEEEecccccceeecCCcc-cccceecccceeE--EE
Confidence 478999999998 777 788876666 55899999999999999999999998754 4578999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeec
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVT 112 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~ 112 (342)
+++|++++++++||||.+. |+|+||++++
T Consensus 74 v~vG~~v~~~~vGdrV~v~~~~~c~~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~g~~~~~~~~~G~fAEy~~v~ 153 (198)
T d2jhfa1 74 ESIGEGVTTVRPGDKVIPLFTPQCGKCRVCKHPEGNFCLKNDLSMPRGTMQDGTSRFTCRGKPIHHFLGTSTFSQYTVVD 153 (198)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSCSHHHHSTTCCCCTTCSSSSCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred EecCccccCcCCCCEEEEeeeecccccccccCCccceeccccccccCccccCccccccccCceeccCCCCCcccCeEEeC
Confidence 9999999999999999741 5799999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEec
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISA 160 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~g 160 (342)
..+++++ |+++++.. +++...++.+...+ ...+++|++|+|..
T Consensus 154 ~~~~~~~-p~~~~~e~-l~~~~~~~~~v~~g---~~~l~~G~~VaVi~ 196 (198)
T d2jhfa1 154 EISVAKI-DAAFALDP-LITHVLPFEKINEG---FDLLRSGESIRTIL 196 (198)
T ss_dssp GGGEEEC-CTTSCCGG-GEEEEEEGGGHHHH---HHHHHTTCCSEEEE
T ss_pred HHHeEEC-CCCCCHHH-HHHHHHHHHhhhhC---CceeeCCCEEEEEE
Confidence 9999999 99855543 33333333322222 13467889888763
|
| >d1uufa1 b.35.1.2 (A:3-144,A:313-349) Hypothetical protein YahK {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Hypothetical protein YahK species: Escherichia coli [TaxId: 562]
Probab=99.88 E-value=5.6e-23 Score=163.46 Aligned_cols=129 Identities=18% Similarity=0.121 Sum_probs=103.9
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+...++ ++| |++++. |.| .++++||||||.++|||++|++.+.|.+....+|+++|||++| +|+++
T Consensus 1 m~a~~~~~~--~~p----l~i~ev--~~P-~pg~geVlVkv~a~gic~sDl~~~~g~~~~~~~P~i~GhE~~G--~V~~v 69 (179)
T d1uufa1 1 IKAVGAYSA--KQP----LEPMDI--TRR-EPGPNDVKIEIAYCGVCHSDLHQVRSEWAGTVYPCVPGHEIVG--RVVAV 69 (179)
T ss_dssp CEEEEBSST--TSC----CEEEEC--CCC-CCCTTEEEEEEEEEECCHHHHHHHHCTTSCCCSSBCCCCCEEE--EEEEE
T ss_pred CeEEEEccC--CCC----CEEEEe--cCC-CCCCCEEEEEEEEECCCCCcceeeeeeeccccccccccccccc--cchhh
Confidence 589888888 877 677665 545 4599999999999999999999999987667789999999777 99999
Q ss_pred cCCCCCCCCCCEEEe---------------------------------------ccccceeEeecCCcceeecCCCCCcc
Q 019332 87 DSENPEFKKGDLVWG---------------------------------------MTGWEEYSLVTAPQLFKIQHTDVPLS 127 (342)
Q Consensus 87 G~~v~~~~vGd~V~~---------------------------------------~g~~~~~~~v~~~~~~~i~p~~~~~~ 127 (342)
|++|+++++||+|.. .|+|+||++++++.++++ |+. ..
T Consensus 70 G~~V~~~~vGdrV~v~~~~~~cg~C~~C~~g~~~~C~~~~~~~~~~~~~~~~~~~GgfaEy~~v~~~~~~~i-p~~--~~ 146 (179)
T d1uufa1 70 GDQVEKYAPGDLVGVGCIVDSCKHCEECEDGLENYCDHMTGTYNSPTPDEPGHTLGGYSQQIVVHERYVLRI-RVA--DI 146 (179)
T ss_dssp CTTCCSCCTTCEEEECSEEECCSSSHHHHTTCGGGCTTCEETTTSBCSSTTSBCCCSSBSEEEEEGGGCEEC-CCC--CE
T ss_pred ccccccCCCCCEEEEcccccccCccccccCcccccCCCccccccccCCCCCcccccccceEEEechHHEEEC-CCC--Cc
Confidence 999999999999952 167999999999999999 765 22
Q ss_pred chhhccCCchhhHHHhhhhhcCCCC
Q 019332 128 YYTGILGMPGMTAYAGFYEVCSPKQ 152 (342)
Q Consensus 128 ~~~a~l~~~~~ta~~al~~~~~~~~ 152 (342)
. +.+..++.++++++.+ +.++-
T Consensus 147 ~--~~~a~~l~~a~~a~~~-a~v~~ 168 (179)
T d1uufa1 147 E--MIRADQINEAYERMLR-GDVKY 168 (179)
T ss_dssp E--EECGGGHHHHHHHHHT-TCSSS
T ss_pred C--hhHhchhHHHHHHHHH-hCccc
Confidence 1 2233466788888843 55443
|
| >d1p0fa1 b.35.1.2 (A:1001-1163,A:1338-1372) Alcohol dehydrogenase {Frog (Rana perezi) [TaxId: 8403]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Alcohol dehydrogenase species: Frog (Rana perezi) [TaxId: 8403]
Probab=99.88 E-value=1.2e-23 Score=170.44 Aligned_cols=139 Identities=15% Similarity=0.140 Sum_probs=109.8
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
.+||||++++++ ++| +++++.+.| .++++||||||.|+|||++|++.+.|.++ ..+|+++|||++| +|
T Consensus 6 ~~~~KAav~~~~--g~~----l~i~ev~~P---~p~~~eVlVkv~a~gICgsDlh~~~G~~~-~~~P~i~GHE~~G--~V 73 (198)
T d1p0fa1 6 DITCKAAVAWEP--HKP----LSLETITVA---PPKAHEVRIKILASGICGSDSSVLKEIIP-SKFPVILGHEAVG--VV 73 (198)
T ss_dssp CEEEEEEEBSST--TSC----CEEEEEEEC---CCCTTEEEEEEEEEECCHHHHHHHTTSSC-CCSSBCCCCCEEE--EE
T ss_pred ceEEEEEEEccC--CCC----CEEEEEECC---CCCCCEEEEEEEEEEEecccceeeeeccc-cccccccceeeee--ee
Confidence 368999999998 877 788876665 55899999999999999999999998764 3679999999776 99
Q ss_pred EEecCCCCCCCCCCEEEec---------------------------------------------------cccceeEeec
Q 019332 84 KVLDSENPEFKKGDLVWGM---------------------------------------------------TGWEEYSLVT 112 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~---------------------------------------------------g~~~~~~~v~ 112 (342)
+++|++++++++||||+.. |+|+||+.++
T Consensus 74 v~~G~~v~~~~~GdrV~~~~~~~Cg~c~~c~~g~~~~C~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~g~faey~~v~ 153 (198)
T d1p0fa1 74 ESIGAGVTCVKPGDKVIPLFVPQCGSCRACKSSNSNFCEKNDMGAKTGLMADMTSRFTCRGKPIYNLMGTSTFTEYTVVA 153 (198)
T ss_dssp EEECTTCCSCCTTCEEEECSSCCCSSSHHHHCTTCCCCTTCSTTTCCCSCTTSCCSEEETTEEEBCSTTTCCSBSEEEEE
T ss_pred eecCcccccCcCCCEEEEEeeccccccccccccccccchhhhccccccccCCCceeEeeCCeeccccCCCccceeeEEec
Confidence 9999999999999999841 4689999999
Q ss_pred CCcceeecCCCCCccchhhccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHH
Q 019332 113 APQLFKIQHTDVPLSYYTGILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQ 167 (342)
Q Consensus 113 ~~~~~~i~p~~~~~~~~~a~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~ 167 (342)
+..++++ |++++.+. ++...+. ...+.++++|||.|+ |++|+
T Consensus 154 ~~~~~ki-p~~~~~~~-~~~~~~~----------~~~v~~~~~vlv~G~-G~iGl 195 (198)
T d1p0fa1 154 DIAVAKI-DPKINVNF-LVSTKLT----------LDQINKAFELLSSGQ-GVRSI 195 (198)
T ss_dssp TTSEEEE-CTTSCGGG-GEEEEEC----------GGGHHHHHHHTTTSS-CSEEE
T ss_pred HHHEEEC-CCCCCHHH-HHHhhcc----------hhhcCCCCEEEEECC-CcceE
Confidence 9999999 88855443 2222111 122344556888885 87765
|
| >d1jqba1 b.35.1.2 (A:1001-1139,A:1314-1351) Bacterial secondary alcohol dehydrogenase {Clostridium beijerinckii [TaxId: 1520]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Bacterial secondary alcohol dehydrogenase species: Clostridium beijerinckii [TaxId: 1520]
Probab=99.86 E-value=3.8e-22 Score=158.14 Aligned_cols=107 Identities=21% Similarity=0.120 Sum_probs=88.6
Q ss_pred ccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEEEEe
Q 019332 7 NKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVAKVL 86 (342)
Q Consensus 7 ~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v~~v 86 (342)
|||+++.++ + ++++++ +|.| .++++|||||++++|||++|++.+.+......+|+++|||++| +|+++
T Consensus 1 MKa~v~~~~--~-----~l~i~e--~p~P-~~~~~eVlIkv~a~gic~sD~~~~~~~~~~~~~P~i~GhE~~G--~V~~v 68 (177)
T d1jqba1 1 MKGFAMLGI--N-----KLGWIE--KERP-VAGSYDAIVRPLAVSPCTSDIHTVFEGALGDRKNMILGHEAVG--EVVEV 68 (177)
T ss_dssp CEEEEEEET--T-----EEEEEE--CCCC-CCCTTCEEEEEEEECCCHHHHHHHHHCTTCCCSSEECCCCEEE--EEEEE
T ss_pred CeEEEEEeC--C-----CeEEEE--eeCC-CCCCCEEEEEEEEEecCCCcccccccCCCCCCCCccCcceeeE--Eeeec
Confidence 699999988 3 356655 5555 4599999999999999999998877665556779999999776 99999
Q ss_pred cCCCCCCCCCCEEEec---------------------------------cccceeEeecCC--cceeecCCCCCc
Q 019332 87 DSENPEFKKGDLVWGM---------------------------------TGWEEYSLVTAP--QLFKIQHTDVPL 126 (342)
Q Consensus 87 G~~v~~~~vGd~V~~~---------------------------------g~~~~~~~v~~~--~~~~i~p~~~~~ 126 (342)
|+++++|++||||... |+|+||+++|.. .++++ |++++.
T Consensus 69 G~~v~~~~vGdrV~v~~~~~cg~c~~C~~g~~~~c~~~~~~~~~g~~~~G~~aEy~~vp~a~~~l~~i-P~~~~~ 142 (177)
T d1jqba1 69 GSEVKDFKPGDRVIVPCTTPDWRSLEVQAGFQQHSNGMLAGWKFSNFKDGVFGEYFHVNDADMNLAIL-PKDVDL 142 (177)
T ss_dssp CTTCCSCCTTCEEEECSCCCCSSSHHHHTTCGGGTTSTTTTCCBTTTBCCSSBSSEEESSHHHHCEEC-CTTSCG
T ss_pred ccccceecCCCcEEEeeeeccccccchhhhhhcccccccccccccCCCChhcCeeEEEEhhhCeEEEC-CCCcch
Confidence 9999999999999731 689999999963 58999 998443
|
| >d1v3va1 b.35.1.2 (A:1-112,A:295-329) Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase {Guinea pig (Cavia porcellus) [TaxId: 10141]} | Back information, alignment and structure |
|---|
class: All beta proteins fold: GroES-like superfamily: GroES-like family: Alcohol dehydrogenase-like, N-terminal domain domain: Leukotriene b4 12-hydroxydehydrogenase/prostaglandin 15-keto reductase species: Guinea pig (Cavia porcellus) [TaxId: 10141]
Probab=99.84 E-value=3.3e-20 Score=141.58 Aligned_cols=141 Identities=30% Similarity=0.474 Sum_probs=110.2
Q ss_pred cccccEEEEecccCCCCCCCceEEEEeeccccCCCCCCcEEEEEEeeecCcccccccccCCCCccccCCCCCcccccEEE
Q 019332 4 MVRNKQVILKDYVSGFPKETDMYMTESSIELQVPKGSNGVLLKNLYLSCDPYMRPRMTNIKGSYVESFKPGMPISGYGVA 83 (342)
Q Consensus 4 ~~~~~a~~~~~~~~g~p~~~~~~~~~~~~~~p~~~~~~~VlIkv~~~~i~~~d~~~~~~~~~~~~~p~~~G~e~~G~g~v 83 (342)
|+++|+|++.+++.|.|++++|++++.++| .++++|||||++|.++++..+.. ..+..+|.-+.|.|+.
T Consensus 1 M~~~k~~vl~~~P~G~P~~~~f~l~e~~ip---~~~~gevLvk~~~~svDp~~R~~--------~~~~~~g~~~~g~~vg 69 (147)
T d1v3va1 1 MVKAKSWTLKKHFQGKPTQSDFELKTVELP---PLKNGEVLLEALFLSVDPYMRIA--------SKRLKEGAVMMGQQVA 69 (147)
T ss_dssp CCEEEEEEESSCCCSSCCGGGEEEEEEECC---CCCTTCEEEEEEEEECCTHHHHH--------GGGSCTTSBCCCCEEE
T ss_pred CcccEEEEEccCCCCCCcccceEEEEEECC---CCCCCEEEEEEEEEeEccccccc--------ccccccCCccccceEE
Confidence 467899999999899999899999998777 66899999999999998865432 2233445555566677
Q ss_pred EEecCCCCCCCCCCEEEeccccceeEeecCCcceeecCCCCCc---cc-hhhccCCchhhHHH-hhhhhcCCCCCCEEEE
Q 019332 84 KVLDSENPEFKKGDLVWGMTGWEEYSLVTAPQLFKIQHTDVPL---SY-YTGILGMPGMTAYA-GFYEVCSPKQGECVFI 158 (342)
Q Consensus 84 ~~vG~~v~~~~vGd~V~~~g~~~~~~~v~~~~~~~i~p~~~~~---~~-~~a~l~~~~~ta~~-al~~~~~~~~~~~vlI 158 (342)
+.++++.++|++||+|++.++|+||++++.+.+.++ |++.+. .. +.+++...++||++ .|. ...+.|++||+
T Consensus 70 ~Vv~S~~~~f~~GD~V~g~~gw~ey~v~~~~~l~kv-~~~~~~~~~~~~~~~~lG~~Gmtaay~gl~--~~~k~Getvv~ 146 (147)
T d1v3va1 70 RVVESKNSAFPAGSIVLAQSGWTTHFISDGKGLEKL-LTEWPDKKIQYHEHVTKGFENMPAAFIEML--NGANLGKAVVT 146 (147)
T ss_dssp EEEEESCTTSCTTCEEEECCCSBSEEEECSSSCEEC-CTTCCTTSSCCCEEEEECGGGHHHHHHHHH--TTCCSSEEEEE
T ss_pred EEEEeCCCcccCCCEEEEccCCEeEEEeccceeeEc-cccccccccchhhhHhccccchHHHHHHhh--CCCCCCCEEEe
Confidence 778899999999999999999999999999999999 654321 11 25577778888544 553 44577999986
|
| >d1o8ca2 c.2.1.1 (A:116-192) Hypothetical protein YhdH {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Alcohol dehydrogenase-like, C-terminal domain domain: Hypothetical protein YhdH species: Escherichia coli [TaxId: 562]
Probab=99.59 E-value=5.3e-16 Score=103.25 Aligned_cols=70 Identities=27% Similarity=0.359 Sum_probs=63.7
Q ss_pred hhhccCCchhhHHHhhhh---hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC
Q 019332 129 YTGILGMPGMTAYAGFYE---VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF 199 (342)
Q Consensus 129 ~~a~l~~~~~ta~~al~~---~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~ 199 (342)
++++++++++|||++++. ....+++++|||+|++|++|.+++|+++..|++|+++++++++.++++ ++|+
T Consensus 5 eAa~lg~aGlTA~~al~~~~~~~~~~~~~~vlI~gasGgVG~~aiQlak~~G~~Vi~~t~s~~k~~~~~-~lGA 77 (77)
T d1o8ca2 5 KAMIIGTAGFTAMLCVMALEDAGVRPQDGEIVVTGASGGVGSTAVALLHKLGYQVVAVSGRESTHEYLK-SLGA 77 (77)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTTCCGGGCEEEESSTTSHHHHHHHHHHHHTTCCEEEEESCGGGHHHHH-HHTE
T ss_pred HHHHhhhHHHHHHHHHHHHHhhhhccCCCcEEEEeCCCcHHHHHHHHHHHcCCeEEEEECCHHHHHHHH-HCCC
Confidence 488999999999988753 456789999999999999999999999999999999999999999999 8885
|
| >d1q7ba_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Escherichia coli [TaxId: 562]
Probab=98.42 E-value=7.5e-07 Score=72.96 Aligned_cols=105 Identities=23% Similarity=0.392 Sum_probs=74.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHC--CCCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYF--PEGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~--~~~~d~v 226 (342)
+|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++.. ...|-.+..+..+.+.+.. .|++|++
T Consensus 3 ~gK~alITGas~GIG~a~a~~l~~~G~~Vv~~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 82 (243)
T d1q7ba_ 3 EGKIALVTGASRGIGRAIAETLAARGAKVIGTATSENGAQAISDYLGANGKGLMLNVTDPASIESVLEKIRAEFGEVDIL 82 (243)
T ss_dssp TTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHTCSCSEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHhCCCCcEEEEEecCHHHhhhhhhhhhcccCCccee
Confidence 4789999999999999999999999999999999999888777677653 2344444423333333222 2469999
Q ss_pred EeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 227 FENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 227 id~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
++++|.. ....+++.|++ +|++|.+++...
T Consensus 83 VnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~II~isS~~~ 140 (243)
T d1q7ba_ 83 VNNAGITRDNLLMRMKDEEWNDIIETNLSSVFRLSKAVMRAMMKKRHGRIITIGSVVG 140 (243)
T ss_dssp EECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred hhhhhhccccccccccccccccccceeechhhhhHHHHHHHHHHcCCCEeeeecchhh
Confidence 9998831 12345566533 689999987554
|
| >d1hdca_ c.2.1.2 (A:) 3-alpha,20-beta-hydroxysteroid dehydrogenase {Streptomyces hydrogenans [TaxId: 1905]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha,20-beta-hydroxysteroid dehydrogenase species: Streptomyces hydrogenans [TaxId: 1905]
Probab=98.30 E-value=2.1e-06 Score=70.59 Aligned_cols=106 Identities=18% Similarity=0.167 Sum_probs=73.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
+|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++.. ...|-.+..++.+.+.+... |.+|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iDil 83 (254)
T d1hdca_ 4 SGKTVIITGGARGLGAEAARQAVAAGARVVLADVLDEEGAATARELGDAARYQHLDVTIEEDWQRVVAYAREEFGSVDGL 83 (254)
T ss_dssp CCSEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEcccCCHHHHHHHHHHHHHHcCCccEE
Confidence 5789999999999999999999899999999999999888776567642 12344444233333322221 369999
Q ss_pred EeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceeccc
Q 019332 227 FENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 227 id~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
++++|.. ....+++.++. +|++|.+++....
T Consensus 84 VnnAg~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~~p~m~~~~~G~II~isS~~~~ 142 (254)
T d1hdca_ 84 VNNAGISTGMFLETESVERFRKVVEINLTGVFIGMKTVIPAMKDAGGGSIVNISSAAGL 142 (254)
T ss_dssp EECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EecCccccccccccccccccchhhhHHhhHHHHHHHHHHHHHhhcCCCeecccccchhc
Confidence 9999831 12334444433 6999999986653
|
| >d2d1ya1 c.2.1.2 (A:2-249) Hypothetical protein TTHA0369 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein TTHA0369 species: Thermus thermophilus [TaxId: 274]
Probab=98.30 E-value=2.6e-06 Score=69.80 Aligned_cols=106 Identities=12% Similarity=0.137 Sum_probs=74.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCC--CCccEEE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFP--EGIDIYF 227 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~--~~~d~vi 227 (342)
-.|.++||+||++++|.+.++.+...|++|+++.+++++.+.++ +.+... ..|-.+..+..+.+.+... |++|+++
T Consensus 3 l~GK~alITGas~GIG~aia~~la~~G~~V~~~~~~~~~~~~~~-~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G~iDiLV 81 (248)
T d2d1ya1 3 FAGKGVLVTGGARGIGRAIAQAFAREGALVALCDLRPEGKEVAE-AIGGAFFQVDLEDERERVRFVEEAAYALGRVDVLV 81 (248)
T ss_dssp TTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSTTHHHHHH-HHTCEEEECCTTCHHHHHHHHHHHHHHHSCCCEEE
T ss_pred cCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCeEEEEeCCCHHHHHHHHHHHHHhcCCCCeEE
Confidence 36789999999999999999999999999999999988877776 777642 2344444222322332221 3699999
Q ss_pred eCCChh--------------------------hHHHHHHhhhh--CCEEEEEceeccc
Q 019332 228 ENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 228 d~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
+++|.. ....+++.|++ +|++|.+++....
T Consensus 82 nnAG~~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~Ii~isS~~~~ 139 (248)
T d2d1ya1 82 NNAAIAAPGSALTVRLPEWRRVLEVNLTAPMHLSALAAREMRKVGGGAIVNVASVQGL 139 (248)
T ss_dssp ECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred EeCcCCCCCChhhCCHHHHHHHHHhhhhhHhhhhhhhccccccccccccccccccccc
Confidence 998831 12345566654 5899999876653
|
| >d1hxha_ c.2.1.2 (A:) 3beta/17beta hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3beta/17beta hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=98.30 E-value=2.2e-06 Score=70.55 Aligned_cols=105 Identities=20% Similarity=0.224 Sum_probs=75.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee---EecCCchhHH---HHHHHHCCCCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA---FNYKEEPDLN---EALKRYFPEGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v---~~~~~~~~~~---~~i~~~~~~~~d~ 225 (342)
+|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.++++.... .|..+..+.. +.+.+.. |.+|+
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~-g~iDi 83 (253)
T d1hxha_ 5 QGKVALVTGGASGVGLEVVKLLLGEGAKVAFSDINEAAGQQLAAELGERSMFVRHDVSSEADWTLVMAAVQRRL-GTLNV 83 (253)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCTTEEEECCCTTCHHHHHHHHHHHHHHH-CSCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCeEEEEeecCCHHHHHHHHHHHHHHh-CCCCe
Confidence 578999999999999999999999999999999999988877767876432 2333331222 3332222 36999
Q ss_pred EEeCCChh--------------------------hHHHHHHhhh-hCCEEEEEceeccc
Q 019332 226 YFENVGGK--------------------------MLDAVLLNMK-IHGRIAVCGMISQY 257 (342)
Q Consensus 226 vid~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~~ 257 (342)
+++++|.. ....+++.|+ .+|++|.+++....
T Consensus 84 lVnnAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~G~Iv~isS~~~~ 142 (253)
T d1hxha_ 84 LVNNAGILLPGDMETGRLEDFSRLLKINTESVFIGCQQGIAAMKETGGSIINMASVSSW 142 (253)
T ss_dssp EEECCCCCCCBCTTTCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTTCEEEEEECCGGGT
T ss_pred EEecccccCCCCcccCCHHHHHHHHHHhhhHHHHHHHHHHHHHHhcCCceecccchhhh
Confidence 99999831 1234555665 47999999886653
|
| >d1ulsa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus [TaxId: 274]
Probab=98.22 E-value=2.1e-06 Score=70.20 Aligned_cols=80 Identities=11% Similarity=0.147 Sum_probs=60.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHH---HHHHHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNE---ALKRYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~---~i~~~~~~~~d~vi 227 (342)
.|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.+++++.. ..|-.+..++.+ ++.+.. |++|+++
T Consensus 4 ~gK~~lITGas~GIG~aia~~l~~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDilV 82 (242)
T d1ulsa_ 4 KDKAVLITGAAHGIGRATLELFAKEGARLVACDIEEGPLREAAEAVGAHPVVMDVADPASVERGFAEALAHL-GRLDGVV 82 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTTTCEEEECCTTCHHHHHHHHHHHHHHH-SSCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCeEEEEecCCHHHHHHHHHHHHHhc-CCceEEE
Confidence 47899999999999999999999999999999999998888775677632 345555423332 333322 3699999
Q ss_pred eCCCh
Q 019332 228 ENVGG 232 (342)
Q Consensus 228 d~~g~ 232 (342)
+++|.
T Consensus 83 nnAG~ 87 (242)
T d1ulsa_ 83 HYAGI 87 (242)
T ss_dssp ECCCC
T ss_pred ECCcc
Confidence 99883
|
| >d1yb1a_ c.2.1.2 (A:) 17-beta-hydroxysteroid dehydrogenase type XI {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 17-beta-hydroxysteroid dehydrogenase type XI species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.20 E-value=3.9e-06 Score=68.55 Aligned_cols=105 Identities=22% Similarity=0.234 Sum_probs=72.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC---eeEecCCchhHHHHHHHHC--CCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD---EAFNYKEEPDLNEALKRYF--PEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~--~~~~ 223 (342)
.|.++||+||++|+|.+.+..+...|++|+.+++++++.+.+.++ .|.. ...|..+..+..+.+++.. .|.+
T Consensus 6 ~Gkv~lITGas~GIG~~ia~~la~~G~~V~l~~r~~~~l~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~g~i 85 (244)
T d1yb1a_ 6 TGEIVLITGAGHGIGRLTAYEFAKLKSKLVLWDINKHGLEETAAKCKGLGAKVHTFVVDCSNREDIYSSAKKVKAEIGDV 85 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCC
Confidence 578999999999999998888888899999999999888766543 3332 2345555423333333222 2369
Q ss_pred cEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 224 DIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 224 d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
|++++++|.. ....+++.+.. .|+++.+++...
T Consensus 86 dilinnag~~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~~~G~Iv~isS~~~ 146 (244)
T d1yb1a_ 86 SILVNNAGVVYTSDLFATQDPQIEKTFEVNVLAHFWTTKAFLPAMTKNNHGHIVTVASAAG 146 (244)
T ss_dssp SEEEECCCCCCCCCCGGGHHHHHHHHHHHHTHHHHHHHHHHHHHHHHTTCEEEEEECCCC-
T ss_pred ceeEeeccccccccccccchhHHHhhcceeeeccHHHHHHHhhhHHhcCCceEEEeecchh
Confidence 9999999941 12335555655 478998887655
|
| >d1pr9a_ c.2.1.2 (A:) Carbonyl reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.19 E-value=4.8e-06 Score=68.05 Aligned_cols=80 Identities=16% Similarity=0.153 Sum_probs=60.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
-.|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++.. ..+|-.+. +-.+++.+.. |.+|++++
T Consensus 5 L~GK~~lITGas~GIG~aia~~la~~G~~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~d~-~~v~~~~~~~-g~iDilVn 82 (244)
T d1pr9a_ 5 LAGRRVLVTGAGKGIGRGTVQALHATGARVVAVSRTQADLDSLVRECPGIEPVCVDLGDW-EATERALGSV-GPVDLLVN 82 (244)
T ss_dssp CTTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCCEEEE
T ss_pred CCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHh-CCceEEEe
Confidence 36889999999999999999999999999999999999888776566542 23455554 3333333322 36999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 83 nAg~ 86 (244)
T d1pr9a_ 83 NAAV 86 (244)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9883
|
| >d1zema1 c.2.1.2 (A:3-262) Xylitol dehydrogenase {Gluconobacter oxydans [TaxId: 442]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Xylitol dehydrogenase species: Gluconobacter oxydans [TaxId: 442]
Probab=98.19 E-value=5.2e-06 Score=68.52 Aligned_cols=105 Identities=18% Similarity=0.255 Sum_probs=71.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHHHHHHHCC--CCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNEALKRYFP--EGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~~i~~~~~--~~~ 223 (342)
.|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ |.. ...|-.+..++.+.+.+... |++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~i 83 (260)
T d1zema1 4 NGKVCLVTGAGGNIGLATALRLAEEGTAIALLDMNREALEKAEASVREKGVEARSYVCDVTSEEAVIGTVDSVVRDFGKI 83 (260)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTSCEEEEECCTTCHHHHHHHHHHHHHHHSCC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999998877665443 332 12344443233333332221 369
Q ss_pred cEEEeCCCh-h--------------------------hHHHHHHhh--hhCCEEEEEceecc
Q 019332 224 DIYFENVGG-K--------------------------MLDAVLLNM--KIHGRIAVCGMISQ 256 (342)
Q Consensus 224 d~vid~~g~-~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 256 (342)
|++++++|. . ....+++.+ +.+|++|.+++...
T Consensus 84 DilVnnaG~~~~~~~~~~~~~~~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~II~isS~~~ 145 (260)
T d1zema1 84 DFLFNNAGYQGAFAPVQDYPSDDFARVLTINVTGAFHVLKAVSRQMITQNYGRIVNTASMAG 145 (260)
T ss_dssp CEEEECCCCCCCCBCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred CeehhhhccccccCccccccHHHHHhhccccccccccchhhHHhhhhhhcCCCCCeeechhh
Confidence 999998883 1 023344444 34799999987654
|
| >d1xq1a_ c.2.1.2 (A:) Tropinone reductase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=98.18 E-value=5.7e-06 Score=68.21 Aligned_cols=105 Identities=17% Similarity=0.306 Sum_probs=69.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchh---HHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPD---LNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~---~~~~i~~~~~~~ 222 (342)
+|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.+++ +.. ...|..+..+ +.+.+.+..+|.
T Consensus 7 kgK~alVTGas~GIG~aiA~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~~g~ 86 (259)
T d1xq1a_ 7 KAKTVLVTGGTKGIGHAIVEEFAGFGAVIHTCARNEYELNECLSKWQKKGFQVTGSVCDASLRPEREKLMQTVSSMFGGK 86 (259)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHHTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCceEEEeccCCCHHHHHHHHHHHHHHhCCC
Confidence 5789999999999999999999999999999999998877665343 221 1234444312 333333333456
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 223 IDIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
+|++++++|.. ....+++.++. +|+++.+++...
T Consensus 87 idilvnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~ 148 (259)
T d1xq1a_ 87 LDILINNLGAIRSKPTLDYTAEDFSFHISTNLESAYHLSQLAHPLLKASGCGNIIFMSSIAG 148 (259)
T ss_dssp CSEEEEECCC------CCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSSCEEEEEC----
T ss_pred cccccccccccCCCchhhCCHHHHHHHHHHHhhhheeeehhhhhcccccccccccccccccc
Confidence 99999999841 12334455543 589999887554
|
| >d2gdza1 c.2.1.2 (A:3-256) 15-hydroxyprostaglandin dehydrogenase, PGDH {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 15-hydroxyprostaglandin dehydrogenase, PGDH species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.16 E-value=8.2e-06 Score=67.07 Aligned_cols=106 Identities=15% Similarity=0.154 Sum_probs=71.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC----Ce----eEecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF----DE----AFNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~----~~----v~~~~~~~~~~~~i~~~~~--~ 221 (342)
.|.++||+||++|+|.+.++.+...|++|+.++++.++.+.+.+++.. .. ..|-.+..++.+.+++... |
T Consensus 2 ~GKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~G 81 (254)
T d2gdza1 2 NGKVALVTGAAQGIGRAFAEALLLKGAKVALVDWNLEAGVQCKAALHEQFEPQKTLFIQCDVADQQQLRDTFRKVVDHFG 81 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHTTTSCGGGEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHhcCCCcEEEEEeecCCHHHHHHHHHHHHHHcC
Confidence 478999999999999999999999999999999999887766544421 11 2344444233333333222 3
Q ss_pred CccEEEeCCChh------------------hHHHHHHhhhh-----CCEEEEEceeccc
Q 019332 222 GIDIYFENVGGK------------------MLDAVLLNMKI-----HGRIAVCGMISQY 257 (342)
Q Consensus 222 ~~d~vid~~g~~------------------~~~~~~~~l~~-----~G~~v~~g~~~~~ 257 (342)
++|++++++|.. ....+++.|++ +|+++.+++....
T Consensus 82 ~iDilVnnAg~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~~~~~~g~Iv~isS~~~~ 140 (254)
T d2gdza1 82 RLDILVNNAGVNNEKNWEKTLQINLVSVISGTYLGLDYMSKQNGGEGGIIINMSSLAGL 140 (254)
T ss_dssp CCCEEEECCCCCCSSSHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred CcCeecccccccccccchheeeeehhhHHHHHHHHHHHHHHhhcCCCcEEEeeccHhhc
Confidence 699999999941 12234455543 4889999876653
|
| >d1pjca1 c.2.1.4 (A:136-303) L-alanine dehydrogenase {Phormidium lapideum [TaxId: 32060]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: L-alanine dehydrogenase species: Phormidium lapideum [TaxId: 32060]
Probab=98.15 E-value=1.2e-05 Score=60.55 Aligned_cols=100 Identities=18% Similarity=0.170 Sum_probs=76.3
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.-+|+|.|+ |.+|+.|++.|+.+|++|.+.+.+.++++.++..++.. .....++. .+.+.+++ .|+||.++=
T Consensus 32 pa~V~ViGa-GvaG~~A~~~A~~lGA~V~~~D~~~~~l~~l~~~~~~~~~~~~~~~~-~l~~~~~~-----aDivI~aal 104 (168)
T d1pjca1 32 PGKVVILGG-GVVGTEAAKMAVGLGAQVQIFDINVERLSYLETLFGSRVELLYSNSA-EIETAVAE-----ADLLIGAVL 104 (168)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGSEEEECCHH-HHHHHHHT-----CSEEEECCC
T ss_pred CcEEEEECC-ChHHHHHHHHHhhCCCEEEEEeCcHHHHHHHHHhhcccceeehhhhh-hHHHhhcc-----CcEEEEeee
Confidence 468999997 99999999999999999999999999999988444432 33333333 55555553 899998765
Q ss_pred hh-------hHHHHHHhhhhCCEEEEEceeccccC
Q 019332 232 GK-------MLDAVLLNMKIHGRIAVCGMISQYNL 259 (342)
Q Consensus 232 ~~-------~~~~~~~~l~~~G~~v~~g~~~~~~~ 259 (342)
-+ .-+..++.++++.-+|++....+-+.
T Consensus 105 ipG~~aP~lIt~~mv~~Mk~GSVIVDvaidqGG~~ 139 (168)
T d1pjca1 105 VPGRRAPILVPASLVEQMRTGSVIVDVAVDQGGCV 139 (168)
T ss_dssp CTTSSCCCCBCHHHHTTSCTTCEEEETTCTTCCSB
T ss_pred cCCcccCeeecHHHHhhcCCCcEEEEeecCCCCcc
Confidence 21 34678899999999999987555444
|
| >d1vl8a_ c.2.1.2 (A:) Gluconate 5-dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Gluconate 5-dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=98.15 E-value=1e-05 Score=66.34 Aligned_cols=105 Identities=14% Similarity=0.221 Sum_probs=71.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH----HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN----KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~----~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+ +.|... ..|-.++.++.+.+.+... |+
T Consensus 4 ~gK~~lITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~ 83 (251)
T d1vl8a_ 4 RGRVALVTGGSRGLGFGIAQGLAEAGCSVVVASRNLEEASEAAQKLTEKYGVETMAFRCDVSNYEEVKKLLEAVKEKFGK 83 (251)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHCCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCcEEEEEccCCCHHHHHHHHHHHHHHcCC
Confidence 47899999999999999999999999999999999887654432 445432 2344444233323332221 36
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 223 IDIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
+|++++++|.. ....+++.|+. +|+++.+++...
T Consensus 84 iDiLVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~i~S~~~ 145 (251)
T d1vl8a_ 84 LDTVVNAAGINRRHPAEEFPLDEFRQVIEVNLFGTYYVCREAFSLLRESDNPSIINIGSLTV 145 (251)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHTTCSSCEEEEECCGGG
T ss_pred CCEEEECCCCCCCCChhhCCHHHHHHHHHhhhhhhhhhhhhhhhcccccccccccccccchh
Confidence 99999999831 12445566644 579999987543
|
| >d1nffa_ c.2.1.2 (A:) Putative oxidoreductase Rv2002 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative oxidoreductase Rv2002 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=98.13 E-value=3.6e-06 Score=68.74 Aligned_cols=106 Identities=16% Similarity=0.172 Sum_probs=73.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++... ..|-.+..++.+.+++... +++|++
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~idil 84 (244)
T d1nffa_ 5 TGKVALVSGGARGMGASHVRAMVAEGAKVVFGDILDEEGKAMAAELADAARYVHLDVTQPAQWKAAVDTAVTAFGGLHVL 84 (244)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHTGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhhCcceEEEeecCCHHHHHHHHHHHHHHhCCCeEE
Confidence 57899999999999999999999999999999999998887775665421 2344444233333333222 369999
Q ss_pred EeCCChh-----------h---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 227 FENVGGK-----------M---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 227 id~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
++++|.. . ...+.+.++. +|++|.+++....
T Consensus 85 innAG~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 143 (244)
T d1nffa_ 85 VNNAGILNIGTIEDYALTEWQRILDVNLTGVFLGIRAVVKPMKEAGRGSIINISSIEGL 143 (244)
T ss_dssp EECCCCCCCBCTTTSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred EECCcccCCCchhhCCHHHHhHHhhcccchhhHHHHHHHhHHHhcCcceEEeccccccc
Confidence 9999841 1 1234444433 6899999886653
|
| >d1cyda_ c.2.1.2 (A:) Carbonyl reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=98.13 E-value=7.4e-06 Score=66.79 Aligned_cols=79 Identities=15% Similarity=0.126 Sum_probs=58.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++... .+|-.+. +-.+++-+.. |++|+++++
T Consensus 4 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~Dv~~~-~~v~~~~~~~-g~iDilVnn 81 (242)
T d1cyda_ 4 SGLRALVTGAGKGIGRDTVKALHASGAKVVAVTRTNSDLVSLAKECPGIEPVCVDLGDW-DATEKALGGI-GPVDLLVNN 81 (242)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHSTTCEEEECCTTCH-HHHHHHHTTC-CCCSEEEEC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEEeCCCH-HHHHHHHHHc-CCCeEEEEC
Confidence 57899999999999999999999999999999999988877765654422 3455554 3333332222 369999999
Q ss_pred CCh
Q 019332 230 VGG 232 (342)
Q Consensus 230 ~g~ 232 (342)
+|.
T Consensus 82 Ag~ 84 (242)
T d1cyda_ 82 AAL 84 (242)
T ss_dssp CCC
T ss_pred Ccc
Confidence 883
|
| >d1xg5a_ c.2.1.2 (A:) Putative dehydrogenase ARPG836 (MGC4172) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative dehydrogenase ARPG836 (MGC4172) species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.13 E-value=8.2e-06 Score=67.18 Aligned_cols=80 Identities=26% Similarity=0.432 Sum_probs=57.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC-Cee----EecCCchh---HHHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF-DEA----FNYKEEPD---LNEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~-~~v----~~~~~~~~---~~~~i~~~~~ 220 (342)
+|.++||+||++++|.+.++.+...|++|+.+.+++++.+.+.+++ +. ..+ .|-.++.+ +.+.+.+..
T Consensus 9 k~Kv~lITGas~GIG~aiA~~la~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dls~~~~v~~~v~~~~~~~- 87 (257)
T d1xg5a_ 9 RDRLALVTGASGGIGAAVARALVQQGLKVVGCARTVGNIEELAAECKSAGYPGTLIPYRCDLSNEEDILSMFSAIRSQH- 87 (257)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCSSEEEEEECCTTCHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEEEccCCCHHHHHHHHHHHHHhc-
Confidence 4689999999999999999999999999999999998877654333 32 122 24444423 333333333
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
|++|++++++|.
T Consensus 88 g~iD~lVnnAg~ 99 (257)
T d1xg5a_ 88 SGVDICINNAGL 99 (257)
T ss_dssp CCCSEEEECCCC
T ss_pred CCCCEEEecccc
Confidence 369999999984
|
| >d1k2wa_ c.2.1.2 (A:) Sorbitol dehydrogenase {Rhodobacter sphaeroides [TaxId: 1063]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sorbitol dehydrogenase species: Rhodobacter sphaeroides [TaxId: 1063]
Probab=98.11 E-value=3.9e-06 Score=69.15 Aligned_cols=81 Identities=14% Similarity=0.225 Sum_probs=60.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
+|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.+++|... ..|-.++.++.+.+.+... |++|++
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~g~iDil 83 (256)
T d1k2wa_ 4 DGKTALITGSARGIGRAFAEAYVREGARVAIADINLEAARATAAEIGPAACAIALDVTDQASIDRCVAELLDRWGSIDIL 83 (256)
T ss_dssp TTEEEEEETCSSHHHHHHHHHHHHTTEEEEEEESCHHHHHHHHHHHCTTEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCceEEEEeeCCCHHHHHHHHHHHHHHhCCccEE
Confidence 47899999999999999999999999999999999998887776887642 2344454233333333221 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 84 VnnAg~ 89 (256)
T d1k2wa_ 84 VNNAAL 89 (256)
T ss_dssp EECCCC
T ss_pred Eeeccc
Confidence 999983
|
| >d1luaa1 c.2.1.7 (A:98-288) Methylene-tetrahydromethanopterin dehydrogenase {Methylobacterium extorquens [TaxId: 408]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylene-tetrahydromethanopterin dehydrogenase species: Methylobacterium extorquens [TaxId: 408]
Probab=98.11 E-value=8.4e-06 Score=63.91 Aligned_cols=78 Identities=17% Similarity=0.147 Sum_probs=58.7
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC----C-CeeEecCCchhHHHHHHHHCCCCcc
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG----F-DEAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g----~-~~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
--+|.++||+||+|++|.++++.+...|++|+.++++.++.+.+.+++. . ....|..+. +.+++.. +++|
T Consensus 20 ~l~gK~vlItGasgGIG~~ia~~la~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~d~~~~----~~~~~~~-~~iD 94 (191)
T d1luaa1 20 SVKGKKAVVLAGTGPVGMRSAALLAGEGAEVVLCGRKLDKAQAAADSVNKRFKVNVTAAETADD----ASRAEAV-KGAH 94 (191)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHHHHHHHHHTCCCEEEECCSH----HHHHHHT-TTCS
T ss_pred CCCCCEEEEECCCHHHHHHHHHHHHhhccchhhcccchHHHHHHHHHHHhccchhhhhhhcccH----HHHHHHh-cCcC
Confidence 3578999999999999999999999999999999999988876654432 2 223454443 2344443 3599
Q ss_pred EEEeCCCh
Q 019332 225 IYFENVGG 232 (342)
Q Consensus 225 ~vid~~g~ 232 (342)
++|++.|.
T Consensus 95 ilin~Ag~ 102 (191)
T d1luaa1 95 FVFTAGAI 102 (191)
T ss_dssp EEEECCCT
T ss_pred eeeecCcc
Confidence 99999884
|
| >d1wmaa1 c.2.1.2 (A:2-276) Carbonyl reductase/20beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase/20beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.10 E-value=2.6e-06 Score=71.03 Aligned_cols=102 Identities=19% Similarity=0.339 Sum_probs=68.5
Q ss_pred CCEE-EEecCCcHHHHHHHH-HHHHcCCEEEEEeCChhhHHHHHHHc---CCC-e--eEecCCch---hHHHHHHHHCCC
Q 019332 153 GECV-FISAASGAVGQLVGQ-FAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEP---DLNEALKRYFPE 221 (342)
Q Consensus 153 ~~~v-lI~ga~g~vG~~ai~-la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~---~~~~~i~~~~~~ 221 (342)
|.+| ||+||++|||+++++ |++..|++|+.+++++++.+.+.+++ +.. . .+|-.+.. .+.+.+.+.. +
T Consensus 2 g~rVAlVTGas~GIG~a~A~~la~~~g~~Vi~~~r~~~~~~~~~~~l~~~~~~~~~~~~Dvs~~~sv~~~~~~~~~~~-g 80 (275)
T d1wmaa1 2 GIHVALVTGGNKGIGLAIVRDLCRLFSGDVVLTARDVTRGQAAVQQLQAEGLSPRFHQLDIDDLQSIRALRDFLRKEY-G 80 (275)
T ss_dssp CCCEEEESSCSSHHHHHHHHHHHHHSSSEEEEEESSHHHHHHHHHHHHHTTCCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCeEEEECCCCCHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEEecCCHHHHHHHHHHHHHhc-C
Confidence 5566 899999999998765 56667999999999999887665444 332 2 23444431 2334444433 3
Q ss_pred CccEEEeCCChh--------------------------hHHHHHHhhhhCCEEEEEceec
Q 019332 222 GIDIYFENVGGK--------------------------MLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 222 ~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
.+|++++++|-. ....+++.|++.|+++.+++..
T Consensus 81 ~iDiLVnNAGi~~~~~~~~~~~~~~~~~~~vN~~g~~~l~~~~lp~m~~~g~ivnisS~~ 140 (275)
T d1wmaa1 81 GLDVLVNNAGIAFKVADPTPFHIQAEVTMKTNFFGTRDVCTELLPLIKPQGRVVNVSSIM 140 (275)
T ss_dssp SEEEEEECCCCCCCTTCCSCHHHHHHHHHHHHTHHHHHHHHHHGGGEEEEEEEEEECCHH
T ss_pred CcEEEEEcCCcCCCCCcccCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccccc
Confidence 699999999831 1233455667889999988643
|
| >d1ydea1 c.2.1.2 (A:4-253) Retinal dehydrogenase/reductase 3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Retinal dehydrogenase/reductase 3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.10 E-value=5.8e-06 Score=67.74 Aligned_cols=105 Identities=13% Similarity=0.154 Sum_probs=73.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCC--CCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFP--EGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~--~~~d~vi 227 (342)
.|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++... ..|-.+..+..+.+.+... |++|+++
T Consensus 5 ~GK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~g~iDilV 84 (250)
T d1ydea1 5 AGKVVVVTGGGRGIGAGIVRAFVNSGARVVICDKDESGGRALEQELPGAVFILCDVTQEDDVKTLVSETIRRFGRLDCVV 84 (250)
T ss_dssp TTCEEEEETCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCTTEEEEECCTTSHHHHHHHHHHHHHHHSCCCEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHhcCCCeEEEccCCCHHHHHHHHHHHHHhcCCCCEEE
Confidence 57899999999999999999999999999999999999888875555422 2344444233332332221 3699999
Q ss_pred eCCCh-h--------------------------hHHHHHHhhhh-CCEEEEEceecc
Q 019332 228 ENVGG-K--------------------------MLDAVLLNMKI-HGRIAVCGMISQ 256 (342)
Q Consensus 228 d~~g~-~--------------------------~~~~~~~~l~~-~G~~v~~g~~~~ 256 (342)
+++|. . ....+++.|+. +|+++.+++...
T Consensus 85 nnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~p~m~~~~G~Ii~isS~~~ 141 (250)
T d1ydea1 85 NNAGHHPPPQRPEETSAQGFRQLLELNLLGTYTLTKLALPYLRKSQGNVINISSLVG 141 (250)
T ss_dssp ECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEECCHHH
T ss_pred ecccccccccccccccHHHHHHHHHHhhhhHHHHHHHhhHHHHhCCCCCcccccccc
Confidence 99883 1 12334455544 689999987554
|
| >d2c07a1 c.2.1.2 (A:54-304) beta-keto acyl carrier protein reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=98.09 E-value=7.6e-06 Score=67.13 Aligned_cols=104 Identities=15% Similarity=0.245 Sum_probs=70.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC---eeEecCCchhHHH---HHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD---EAFNYKEEPDLNE---ALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~---~v~~~~~~~~~~~---~i~~~~~~~ 222 (342)
.+..+||+||++|+|.+.++.+...|++|+++.+++++.+.+.+++ |.. ...|-.+..++.+ ++.+.. |+
T Consensus 9 enKvalITGas~GIG~a~a~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~-g~ 87 (251)
T d2c07a1 9 ENKVALVTGAGRGIGREIAKMLAKSVSHVICISRTQKSCDSVVDEIKSFGYESSGYAGDVSKKEEISEVINKILTEH-KN 87 (251)
T ss_dssp SSCEEEEESTTSHHHHHHHHHHTTTSSEEEEEESSHHHHHHHHHHHHTTTCCEEEEECCTTCHHHHHHHHHHHHHHC-SC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHhc-CC
Confidence 4788999999999999999988899999999999998876655333 332 1234444423333 333332 46
Q ss_pred ccEEEeCCChh-----------h---------------HHHHHHhhh--hCCEEEEEceecc
Q 019332 223 IDIYFENVGGK-----------M---------------LDAVLLNMK--IHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~ 256 (342)
+|++++++|.. . ...+++.++ .+|++|.+++...
T Consensus 88 iDilvnnag~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~ 149 (251)
T d2c07a1 88 VDILVNNAGITRDNLFLRMKNDEWEDVLRTNLNSLFYITQPISKRMINNRYGRIINISSIVG 149 (251)
T ss_dssp CCEEEECCCCCCCCCTTTCCHHHHHHHHHHHTTHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred ceeeeeccccccccccccccHHHHhhhheeeehhhhhhhhhcCcccccCCCeEEEEECCHHh
Confidence 99999988831 1 233444443 3599999987554
|
| >d1bdba_ c.2.1.2 (A:) Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase {Pseudomonas sp., lb400 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Cis-biphenyl-2,3-dihydrodiol-2,3-dehydrogenase species: Pseudomonas sp., lb400 [TaxId: 306]
Probab=98.09 E-value=4.3e-06 Score=69.71 Aligned_cols=80 Identities=21% Similarity=0.270 Sum_probs=59.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++++... ..|..+..+..+.+.+... +.+|++
T Consensus 4 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~~~g~idil 83 (276)
T d1bdba_ 4 KGEAVLITGGASGLGRALVDRFVAEGAKVAVLDKSAERLAELETDHGDNVLGIVGDVRSLEDQKQAASRCVARFGKIDTL 83 (276)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHGGGEEEEECCTTCHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeeEEecccccHHHHHHHHHHHHHHhCCcccc
Confidence 57899999999999999999999999999999999998877775776532 2344444222222222221 369999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
++++|
T Consensus 84 vnnAG 88 (276)
T d1bdba_ 84 IPNAG 88 (276)
T ss_dssp ECCCC
T ss_pred ccccc
Confidence 99987
|
| >d2bgka1 c.2.1.2 (A:11-278) Rhizome secoisolariciresinol dehydrogenase {Mayapple (Podophyllum peltatum) [TaxId: 35933]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Rhizome secoisolariciresinol dehydrogenase species: Mayapple (Podophyllum peltatum) [TaxId: 35933]
Probab=98.03 E-value=8.7e-06 Score=67.47 Aligned_cols=80 Identities=21% Similarity=0.338 Sum_probs=58.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---e--eEecCCchhHHHHHHHHCC--CCcc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---E--AFNYKEEPDLNEALKRYFP--EGID 224 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~--v~~~~~~~~~~~~i~~~~~--~~~d 224 (342)
.|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.++++.. . ..|-.+..++.+.+.+... |.+|
T Consensus 5 ~gKvalITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~l~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~g~iD 84 (268)
T d2bgka1 5 QDKVAIITGGAGGIGETTAKLFVRYGAKVVIADIADDHGQKVCNNIGSPDVISFVHCDVTKDEDVRNLVDTTIAKHGKLD 84 (268)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHHSCCC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhcCCCceEEEEccCCCHHHHHHHHHHHHHHcCCcc
Confidence 5789999999999999999999999999999999999888777566542 1 1244443233333322221 3699
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++++++|
T Consensus 85 ~lVnnAG 91 (268)
T d2bgka1 85 IMFGNVG 91 (268)
T ss_dssp EEEECCC
T ss_pred eeccccc
Confidence 9999988
|
| >d1ae1a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), I [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), I [TaxId: 4076]
Probab=98.02 E-value=1.2e-05 Score=66.21 Aligned_cols=81 Identities=16% Similarity=0.267 Sum_probs=59.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe---eEecCCchh---HHHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE---AFNYKEEPD---LNEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~---~~~~i~~~~~~~ 222 (342)
+|.++||+||++++|.+.++.+...|++|+.+++++++.+.+.++ .+... ..|-.+..+ +.+++.+..++.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~D~s~~~~~~~~~~~~~~~~~g~ 84 (258)
T d1ae1a_ 5 KGTTALVTGGSKGIGYAIVEELAGLGARVYTCSRNEKELDECLEIWREKGLNVEGSVCDLLSRTERDKLMQTVAHVFDGK 84 (258)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHTTSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeecCCHHHHHHHHHHHHHHhCCC
Confidence 688999999999999999999999999999999999877655433 34322 234444412 334455555557
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 85 idilinnag~ 94 (258)
T d1ae1a_ 85 LNILVNNAGV 94 (258)
T ss_dssp CCEEEECCCC
T ss_pred cEEEeccccc
Confidence 9999999884
|
| >d2ag5a1 c.2.1.2 (A:1-245) Dehydrogenase/reductase SDR family member 6, DHRS6 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dehydrogenase/reductase SDR family member 6, DHRS6 species: Human (Homo sapiens) [TaxId: 9606]
Probab=98.02 E-value=6.4e-06 Score=67.33 Aligned_cols=79 Identities=18% Similarity=0.302 Sum_probs=60.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+..+.. .+.|.... +..+...+.. +++|+++++.
T Consensus 5 ~gK~alITGas~GIG~aia~~la~~G~~Vi~~~r~~~~l~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~-~~id~lVn~a 82 (245)
T d2ag5a1 5 DGKVIILTAAAQGIGQAAALAFAREGAKVIATDINESKLQELEKYPGIQTRVLDVTKK-KQIDQFANEV-ERLDVLFNVA 82 (245)
T ss_dssp TTCEEEESSTTSHHHHHHHHHHHHTTCEEEEEESCHHHHGGGGGSTTEEEEECCTTCH-HHHHHHHHHC-SCCSEEEECC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHhccCCceeeeecccc-cccccccccc-ccceeEEecc
Confidence 5789999999999999999999999999999999998887776344442 33444444 5555555543 3699999998
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
|.
T Consensus 83 g~ 84 (245)
T d2ag5a1 83 GF 84 (245)
T ss_dssp CC
T ss_pred cc
Confidence 83
|
| >d1zk4a1 c.2.1.2 (A:1-251) R-specific alcohol dehydrogenase {Lactobacillus brevis [TaxId: 1580]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: R-specific alcohol dehydrogenase species: Lactobacillus brevis [TaxId: 1580]
Probab=98.00 E-value=9.6e-06 Score=66.50 Aligned_cols=80 Identities=16% Similarity=0.204 Sum_probs=59.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-e----eEecCCchh---HHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-E----AFNYKEEPD---LNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~----v~~~~~~~~---~~~~i~~~~~~~~ 223 (342)
.|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.++++.. . ..|-.+..+ +.+.+.+.. |++
T Consensus 5 ~gK~alVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~-G~i 83 (251)
T d1zk4a1 5 DGKVAIITGGTLGIGLAIATKFVEEGAKVMITGRHSDVGEKAAKSVGTPDQIQFFQHDSSDEDGWTKLFDATEKAF-GPV 83 (251)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCCTTTEEEEECCTTCHHHHHHHHHHHHHHH-SSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHhCCCCcEEEEEccCCCHHHHHHHHHHHHHHh-CCc
Confidence 5789999999999999999999999999999999999888777566541 1 124444312 333333332 469
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 84 DiLVnnAg~ 92 (251)
T d1zk4a1 84 STLVNNAGI 92 (251)
T ss_dssp CEEEECCCC
T ss_pred eEEEecccc
Confidence 999999984
|
| >d1dhra_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.99 E-value=1.8e-06 Score=70.30 Aligned_cols=100 Identities=12% Similarity=0.169 Sum_probs=65.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCC--c---hhHHHHHHHHCCC-CccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKE--E---PDLNEALKRYFPE-GIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~--~---~~~~~~i~~~~~~-~~d~ 225 (342)
+|.+|||+||++++|.+.++.+...|++|+.+.+++++... ....+.... . ..+...+.+..+. ++|+
T Consensus 1 egK~vlITGas~GIG~a~a~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~iD~ 74 (236)
T d1dhra_ 1 EARRVLVYGGRGALGSRCVQAFRARNWWVASIDVVENEEAS------ASVIVKMTDSFTEQADQVTAEVGKLLGDQKVDA 74 (236)
T ss_dssp CCCEEEEETTTSHHHHHHHHHHHTTTCEEEEEESSCCTTSS------EEEECCCCSCHHHHHHHHHHHHHHHHTTCCEEE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEeCCcccccc------ccceeecccCcHHHHHHHHHHHHHHhCCCCceE
Confidence 47899999999999999999999999999999876543211 111111111 1 0223333343333 7999
Q ss_pred EEeCCCh-h-----------h---------------HHHHHHhhhhCCEEEEEceeccc
Q 019332 226 YFENVGG-K-----------M---------------LDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 226 vid~~g~-~-----------~---------------~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
+++++|. . . ...+++.++++|+++.+++....
T Consensus 75 lInnAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~G~Iv~isS~~~~ 133 (236)
T d1dhra_ 75 ILCVAGGWAGGNAKSKSLFKNCDLMWKQSIWTSTISSHLATKHLKEGGLLTLAGAKAAL 133 (236)
T ss_dssp EEECCCCCCCBCTTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred EEECCcccccccchhcCCHHHHHHHHHHcchHHHHHHHHHHHhcccccceeEEccHHHc
Confidence 9999883 1 0 13345667889999999886553
|
| >d2a4ka1 c.2.1.2 (A:2-242) beta-keto acyl carrier protein reductase {Thermus thermophilus, TTHB020 [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermus thermophilus, TTHB020 [TaxId: 274]
Probab=97.99 E-value=9.2e-06 Score=66.17 Aligned_cols=81 Identities=7% Similarity=0.113 Sum_probs=60.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDIY 226 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~v 226 (342)
.|.++||+||++++|.+.++-+...|++|+.+.++.++.+.+.++++... ..|-.++.++.+.+.+... |++|++
T Consensus 4 ~gK~alItGas~GIG~aia~~l~~~G~~V~~~~r~~~~~~~~~~~~~~~~~~~~~Dls~~~~i~~~~~~i~~~~g~iDiL 83 (241)
T d2a4ka1 4 SGKTILVTGAASGIGRAALDLFAREGASLVAVDREERLLAEAVAALEAEAIAVVADVSDPKAVEAVFAEALEEFGRLHGV 83 (241)
T ss_dssp TTCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHTCCSSEEEEECCTTSHHHHHHHHHHHHHHHSCCCEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCceEEEEecCCCHHHHHHHHHHHHHHhCCccEe
Confidence 57899999999999999999999999999999999998877776777532 2344444233333333322 369999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
++++|.
T Consensus 84 innAg~ 89 (241)
T d2a4ka1 84 AHFAGV 89 (241)
T ss_dssp EEGGGG
T ss_pred cccccc
Confidence 998874
|
| >d2ae2a_ c.2.1.2 (A:) Tropinone reductase {Jimsonweed (Datura stramonium), II [TaxId: 4076]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Tropinone reductase species: Jimsonweed (Datura stramonium), II [TaxId: 4076]
Probab=97.96 E-value=1.8e-05 Score=65.11 Aligned_cols=106 Identities=14% Similarity=0.195 Sum_probs=72.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCe---eEecCCchhH---HHHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDE---AFNYKEEPDL---NEALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~---v~~~~~~~~~---~~~i~~~~~~~ 222 (342)
.|.++||+||++++|.+.++.+...|++|++.++++++.+.+.+++ |... ..|-.+..+. .+.+.+..++.
T Consensus 7 ~GK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~~~~ 86 (259)
T d2ae2a_ 7 EGCTALVTGGSRGIGYGIVEELASLGASVYTCSRNQKELNDCLTQWRSKGFKVEASVCDLSSRSERQELMNTVANHFHGK 86 (259)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCEEEEEECCTTCHHHHHHHHHHHHHHTTTC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCceEEEeeCCCHHHHHHHHHHHHHHhCCC
Confidence 6789999999999999999999999999999999998876655343 3321 2344443222 23333333446
Q ss_pred ccEEEeCCChh-----------h---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 223 IDIYFENVGGK-----------M---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 223 ~d~vid~~g~~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
+|++++++|.. . ...+.+.++. +|+++.+++....
T Consensus 87 idilvnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 149 (259)
T d2ae2a_ 87 LNILVNNAGIVIYKEAKDYTVEDYSLIMSINFEAAYHLSVLAHPFLKASERGNVVFISSVSGA 149 (259)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHTSSEEEEEECCGGGT
T ss_pred ceEEEECCceeccCccccCCHHHHHHHHhcccceeEEEEeeccchhhhhcccccccccccccc
Confidence 99999999831 1 1334455543 6899999886553
|
| >d1xu9a_ c.2.1.2 (A:) 11-beta-hydroxysteroid dehydrogenase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 11-beta-hydroxysteroid dehydrogenase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.96 E-value=2.3e-05 Score=64.90 Aligned_cols=106 Identities=21% Similarity=0.214 Sum_probs=69.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH----cCCC-ee--EecCCchhHHHHH-HHHC--C
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK----FGFD-EA--FNYKEEPDLNEAL-KRYF--P 220 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~----~g~~-~v--~~~~~~~~~~~~i-~~~~--~ 220 (342)
-+|.++||+||++|+|++.+..+...|++|+++++++++++.+.++ .+.. .. .+..+. ...+.+ .... .
T Consensus 12 L~GK~alITGassGIG~aiA~~la~~G~~Vil~~r~~~~l~~~~~~~~~~~~~~~~~~~~d~~~~-~~~~~~~~~~~~~~ 90 (269)
T d1xu9a_ 12 LQGKKVIVTGASKGIGREMAYHLAKMGAHVVVTARSKETLQKVVSHCLELGAASAHYIAGTMEDM-TFAEQFVAQAGKLM 90 (269)
T ss_dssp GTTCEEEESSCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHTCSEEEEEECCTTCH-HHHHHHHHHHHHHH
T ss_pred cCCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHhhhhcccchhhhhhhhhH-HHHHHHHHHHHHHh
Confidence 4688999999999999999999988999999999999988766533 2221 11 122222 222221 1111 2
Q ss_pred CCccEEEeCCChh--------------------------hHHHHHHhhh-hCCEEEEEceeccc
Q 019332 221 EGIDIYFENVGGK--------------------------MLDAVLLNMK-IHGRIAVCGMISQY 257 (342)
Q Consensus 221 ~~~d~vid~~g~~--------------------------~~~~~~~~l~-~~G~~v~~g~~~~~ 257 (342)
+..|+++++.|.. ....+++.++ .+|+++.+++..+.
T Consensus 91 g~~~~li~nag~~~~~~~~~~~~~~~~~~~~vN~~~~~~~~~~~lp~m~~~~G~ii~isS~~~~ 154 (269)
T d1xu9a_ 91 GGLDMLILNHITNTSLNLFHDDIHHVRKSMEVNFLSYVVLTVAALPMLKQSNGSIVVVSSLAGK 154 (269)
T ss_dssp TSCSEEEECCCCCCCCCCCCSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEGGGT
T ss_pred CCccccccccccccccccccCCHHHhhhheeeehhhHHHHHHHHHHHHHhcCCcceEeccchhc
Confidence 3689998877731 1223444444 47899998876653
|
| >d1x1ta1 c.2.1.2 (A:1-260) D(-)-3-hydroxybutyrate dehydrogenase {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: D(-)-3-hydroxybutyrate dehydrogenase species: Pseudomonas fragi [TaxId: 296]
Probab=97.92 E-value=3.8e-05 Score=63.15 Aligned_cols=105 Identities=18% Similarity=0.250 Sum_probs=68.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHH----HcCCCe---eEecCCchhHH---HHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKN----KFGFDE---AFNYKEEPDLN---EALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~----~~g~~~---v~~~~~~~~~~---~~i~~~~~ 220 (342)
+|.++||+||++|+|.+.++.+...|++|+++.+++ ++.+.+.+ +.|... ..|-.+..++. +++.+..
T Consensus 3 ~gK~alITGas~GIG~aiA~~la~~Ga~V~~~~r~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~- 81 (260)
T d1x1ta1 3 KGKVAVVTGSTSGIGLGIATALAAQGADIVLNGFGDAAEIEKVRAGLAAQHGVKVLYDGADLSKGEAVRGLVDNAVRQM- 81 (260)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEECCSCHHHHHHHHHHHHHHHTSCEEEECCCTTSHHHHHHHHHHHHHHH-
T ss_pred CcCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHHhcCCcEEEEECCCCCHHHHHHHHHHHHHHh-
Confidence 678999999999999999999999999999999874 44443332 334422 13444432222 3333322
Q ss_pred CCccEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceeccc
Q 019332 221 EGIDIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 221 ~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
|++|++++++|.. ....+++.+++ +|++|.+++....
T Consensus 82 G~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Iv~isS~~~~ 146 (260)
T d1x1ta1 82 GRIDILVNNAGIQHTALIEDFPTEKWDAILALNLSAVFHGTAAALPHMKKQGFGRIINIASAHGL 146 (260)
T ss_dssp SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred CCCcEEEeecccccCCchhhhhHHhhhhhhhccccccccccchhhhhHhhcCCceEeecccccce
Confidence 3699999999831 12334555554 5899999886654
|
| >d1xkqa_ c.2.1.2 (A:) Hypothetical protein R05D8.7 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein R05D8.7 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.91 E-value=1.4e-05 Score=66.37 Aligned_cols=81 Identities=16% Similarity=0.304 Sum_probs=57.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC--Ce----eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF--DE----AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~--~~----v~~~~~~~~~~~~i~~~~~-- 220 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +. .. ..|-.+..++.+.+.+...
T Consensus 4 ~gK~alVTGas~GIG~aia~~la~~Ga~V~l~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~~~~~ 83 (272)
T d1xkqa_ 4 SNKTVIITGSSNGIGRTTAILFAQEGANVTITGRSSERLEETRQIILKSGVSEKQVNSVVADVTTEDGQDQIINSTLKQF 83 (272)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHTTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCCCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 4789999999999999999999999999999999998877665433 22 11 2344444233222332221
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
|++|++++++|.
T Consensus 84 g~iDilvnnAG~ 95 (272)
T d1xkqa_ 84 GKIDVLVNNAGA 95 (272)
T ss_dssp SCCCEEEECCCC
T ss_pred CCceEEEeCCcc
Confidence 369999999873
|
| >d1zmta1 c.2.1.2 (A:2-253) Halohydrin dehalogenase HheC {Agrobacterium tumefaciens [TaxId: 358]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Halohydrin dehalogenase HheC species: Agrobacterium tumefaciens [TaxId: 358]
Probab=97.89 E-value=2.1e-05 Score=64.49 Aligned_cols=102 Identities=19% Similarity=0.138 Sum_probs=68.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC----CCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG----FDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g----~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.|.||+||++++|++.+..+...|++|++.+++.++.+.++ +.+ ...+.+..+..++.+.+.+.. |++|+++++
T Consensus 1 ~TAlVTGas~GiG~aiA~~la~~Ga~V~i~~r~~~~~~~~~-~~~~~~~~~dv~~~~~~~~~~~~~~~~~-G~iDiLVnN 78 (252)
T d1zmta1 1 STAIVTNVKHFGGMGSALRLSEAGHTVACHDESFKQKDELE-AFAETYPQLKPMSEQEPAELIEAVTSAY-GQVDVLVSN 78 (252)
T ss_dssp CEEEESSTTSTTHHHHHHHHHHTTCEEEECCGGGGSHHHHH-HHHHHCTTSEECCCCSHHHHHHHHHHHH-SCCCEEEEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-hhhCcEEEeccCCHHHHHHHHHHHHHHc-CCCCEEEEC
Confidence 37899999999999999888889999999998888777665 332 223333333223444444433 369999987
Q ss_pred CCh-h-----------h---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 230 VGG-K-----------M---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 230 ~g~-~-----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
+|. . . ...+++.|+. +|++|.+++....
T Consensus 79 Ag~~~~~~~~~~~~~e~~~~~~~vnl~~~~~~~~~~~~~m~~~~~G~IV~isS~~~~ 135 (252)
T d1zmta1 79 DIFAPEFQPIDKYAVEDYRGAVEALQIRPFALVNAVASQMKKRKSGHIIFITSATPF 135 (252)
T ss_dssp CCCCCCCCCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCSTTT
T ss_pred CcCCCCCCChhhCCHHHHHHHHHHHhHHHHHHHHHHHHhhcccccceeecccccccc
Confidence 662 1 1 1234445543 6999999886553
|
| >d1ja9a_ c.2.1.2 (A:) 1,3,6,8-tetrahydroxynaphthalene reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,6,8-tetrahydroxynaphthalene reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.88 E-value=2.9e-05 Score=63.88 Aligned_cols=107 Identities=19% Similarity=0.273 Sum_probs=69.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~-- 220 (342)
.-.|.++||+||++++|.+.++.+...|++|+++++++ +..+.+.+ +.|... ..|..+..+..+.+.+...
T Consensus 3 ~L~GK~alITGas~GIG~aia~~la~~G~~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~ 82 (259)
T d1ja9a_ 3 PLAGKVALTTGAGRGIGRGIAIELGRRGASVVVNYGSSSKAAEEVVAELKKLGAQGVAIQADISKPSEVVALFDKAVSHF 82 (259)
T ss_dssp TTTTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEcCCChHHHHHHHHHHHHcCCCceEecCCCCCHHHHHHHHHHHHHHc
Confidence 34689999999999999999999999999999876544 33343332 455532 2344443233332332221
Q ss_pred CCccEEEeCCChh--------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 221 EGIDIYFENVGGK--------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 221 ~~~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
|++|++++++|.. ....+++.++++|+++.+.+...
T Consensus 83 g~idilinnag~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~~iii~s~~~ 144 (259)
T d1ja9a_ 83 GGLDFVMSNSGMEVWCDELEVTQELFDKVFNLNTRGQFFVAQQGLKHCRRGGRIILTSSIAA 144 (259)
T ss_dssp SCEEEEECCCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHEEEEEEEEEECCGGG
T ss_pred CCCcEEEeccccccccccccchHHHHHHHHhhccceeeeehhhhhhhhhcCCcccccccccc
Confidence 3699999999941 13456667788888877765443
|
| >d1g0oa_ c.2.1.2 (A:) 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 1,3,8-trihydroxynaphtalene reductase (THNR, naphtol reductase) species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.88 E-value=4.7e-05 Score=63.04 Aligned_cols=105 Identities=19% Similarity=0.288 Sum_probs=70.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh-hhHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK-DKIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~-~~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
+|.++||+||++++|.+.++.+...|++|++++++. +..+.+.+ +.|.+. ..|-.++.++.+.+.+... |+
T Consensus 17 ~gK~~lITGas~GIG~aia~~la~~Ga~Vvi~~~~~~~~~~~~~~~~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 96 (272)
T d1g0oa_ 17 EGKVALVTGAGRGIGREMAMELGRRGCKVIVNYANSTESAEEVVAAIKKNGSDAACVKANVGVVEDIVRMFEEAVKIFGK 96 (272)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchHHHHHHHHHHHhhCCceeeEeCCCCCHHHHHHHHHHHHHHhCC
Confidence 478999999999999999999999999999988764 33333321 445432 2344443233333333322 36
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhhCCEEEEEceecc
Q 019332 223 IDIYFENVGGK--------------------------MLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 223 ~d~vid~~g~~--------------------------~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+|+++++.|.. ....+.+.|...|+.+.++....
T Consensus 97 idilV~nag~~~~~~~~~~~~~~~~~~~~~nl~~~~~~~~~~~~~m~~~g~~i~i~s~~~ 156 (272)
T d1g0oa_ 97 LDIVCSNSGVVSFGHVKDVTPEEFDRVFTINTRGQFFVAREAYKHLEIGGRLILMGSITG 156 (272)
T ss_dssp CCEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHSCTTCEEEEECCGGG
T ss_pred CCccccccccchhhhhhhhhhhHHHHHhhhccceeeeecccccccccccccccccccccc
Confidence 99999988831 13456677788899888876543
|
| >d1fmca_ c.2.1.2 (A:) 7-alpha-hydroxysteroid dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 7-alpha-hydroxysteroid dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=97.87 E-value=1.1e-05 Score=66.18 Aligned_cols=80 Identities=23% Similarity=0.369 Sum_probs=56.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe---eEecCCchhHH---HHHHHHCCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE---AFNYKEEPDLN---EALKRYFPEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~---~~i~~~~~~~ 222 (342)
.|.++||+||++++|.+.++.+...|++|+++++++++.+.+.++ .|... ..|-.++.++. +.+.+.. |+
T Consensus 10 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~~~l~~~g~~~~~~~~Dvs~~~~~~~~~~~~~~~~-g~ 88 (255)
T d1fmca_ 10 DGKCAIITGAGAGIGKEIAITFATAGASVVVSDINADAANHVVDEIQQLGGQAFACRCDITSEQELSALADFAISKL-GK 88 (255)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHTTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHH-SS
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCcEEEEEccCCCHHHHHHHHHHHHHHc-CC
Confidence 678999999999999999999999999999999998877655433 34321 23444431222 2233222 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 89 iDilvnnAG~ 98 (255)
T d1fmca_ 89 VDILVNNAGG 98 (255)
T ss_dssp CCEEEECCCC
T ss_pred CCEeeeCCcC
Confidence 9999999884
|
| >d1iy8a_ c.2.1.2 (A:) Levodione reductase {Corynebacterium aquaticum [TaxId: 144185]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Levodione reductase species: Corynebacterium aquaticum [TaxId: 144185]
Probab=97.87 E-value=2.2e-05 Score=64.53 Aligned_cols=106 Identities=17% Similarity=0.183 Sum_probs=70.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC-Cee----EecCCchhHHHHHHHHCC--C
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF-DEA----FNYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~-~~v----~~~~~~~~~~~~i~~~~~--~ 221 (342)
.|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.+++ +. ..+ .|-.+..++.+.+.+... |
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~G 82 (258)
T d1iy8a_ 3 TDRVVLITGGGSGLGRATAVRLAAEGAKLSLVDVSSEGLEASKAAVLETAPDAEVLTTVADVSDEAQVEAYVTATTERFG 82 (258)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHCTTCCEEEEECCTTSHHHHHHHHHHHHHHHS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhCCCCeEEEEeccCCCHHHHHHHHHHHHHHhC
Confidence 4689999999999999999999999999999999998876554332 22 122 244444233333332221 3
Q ss_pred CccEEEeCCCh-h-----------h---------------HHHHHHhhh--hCCEEEEEceeccc
Q 019332 222 GIDIYFENVGG-K-----------M---------------LDAVLLNMK--IHGRIAVCGMISQY 257 (342)
Q Consensus 222 ~~d~vid~~g~-~-----------~---------------~~~~~~~l~--~~G~~v~~g~~~~~ 257 (342)
++|++++++|. . . ...+.+.++ .+|++|.+++....
T Consensus 83 ~iDiLVnnAG~~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 147 (258)
T d1iy8a_ 83 RIDGFFNNAGIEGKQNPTESFTAAEFDKVVSINLRGVFLGLEKVLKIMREQGSGMVVNTASVGGI 147 (258)
T ss_dssp CCSEEEECCCCCCCCBCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCCEEEEECCGGGT
T ss_pred CCCEEEECCcccccCCchhhhhhhHHHHHhhhhccchhhhhhhhHhhhhhhcCCCCcccccHhhc
Confidence 69999999872 1 0 123444443 46899999886653
|
| >d1gz6a_ c.2.1.2 (A:) (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (3R)-hydroxyacyl-CoA dehydrogenase domain of estradiol 17 beta-Dehydrogenase 4 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=97.86 E-value=6.8e-05 Score=62.98 Aligned_cols=105 Identities=23% Similarity=0.226 Sum_probs=68.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC---------hhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---------KDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s---------~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
.|.++||+||++|+|.+.++.+...|++|++++++ .++.+.+.++ .+.....+..+..+..+.+.+..
T Consensus 6 ~gKvalITGas~GIG~aiA~~la~~Ga~Vvi~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~v~~~~ 85 (302)
T d1gz6a_ 6 DGRVVLVTGAGGGLGRAYALAFAERGALVVVNDLGGDFKGVGKGSSAADKVVEEIRRRGGKAVANYDSVEAGEKLVKTAL 85 (302)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEECCCBCTTSCBCCSHHHHHHHHHHHHTTCEEEEECCCGGGHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCchhhhhhhhHHHHHHHHHHHhhcccccccccchHHHHHHHHHHHH
Confidence 47899999999999999999999999999998654 2333332222 23334455555423333333222
Q ss_pred --CCCccEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceecc
Q 019332 220 --PEGIDIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQ 256 (342)
Q Consensus 220 --~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~ 256 (342)
.|++|++++++|.. ....+++.|+. +|++|.+++...
T Consensus 86 ~~~G~iDiLVnNAGi~~~~~~~~~~~e~~~~~~~vNl~g~~~~~~~~~p~m~~~~~G~IV~isS~~~ 152 (302)
T d1gz6a_ 86 DTFGRIDVVVNNAGILRDRSFSRISDEDWDIIQRVHLRGSFQVTRAAWDHMKKQNYGRIIMTASASG 152 (302)
T ss_dssp HHTSCCCEEEECCCCCCCCCGGGCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCEEEEEECCHHH
T ss_pred HHcCCCCEEEECCccCCCCChhhCCHHHHhhhhceeehhhHHHHHHhHHHHHhCCCcEEEEeCChhh
Confidence 24699999999831 12345555643 589999987654
|
| >d1ooea_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.86 E-value=2.7e-06 Score=69.23 Aligned_cols=99 Identities=17% Similarity=0.154 Sum_probs=64.0
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCc-----hhHHHHHHHH-CCCCccEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEE-----PDLNEALKRY-FPEGIDIY 226 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~-----~~~~~~i~~~-~~~~~d~v 226 (342)
+.+|||+||++++|.+.++.+...|++|+.+++++++... ....+..... ....+.+... ..+.+|++
T Consensus 2 ~gkVlITGas~GIG~aia~~l~~~G~~V~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~iD~l 75 (235)
T d1ooea_ 2 SGKVIVYGGKGALGSAILEFFKKNGYTVLNIDLSANDQAD------SNILVDGNKNWTEQEQSILEQTASSLQGSQVDGV 75 (235)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCCTTSS------EEEECCTTSCHHHHHHHHHHHHHHHHTTCCEEEE
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCchhccc------ccceeccccCchhHHHHHHHHHHHHhcCCCeeEE
Confidence 3579999999999999999999999999999987654211 0011111110 0122223332 23479999
Q ss_pred EeCCCh-h--------------------------hHHHHHHhhhhCCEEEEEceeccc
Q 019332 227 FENVGG-K--------------------------MLDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 227 id~~g~-~--------------------------~~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
++++|. . .....++.|+++|+++.+++....
T Consensus 76 innAG~~~~~~~~~~~~~~~~~~~~~~n~~~~~~~~~~~~~~m~~~g~Iv~isS~~~~ 133 (235)
T d1ooea_ 76 FCVAGGWAGGSASSKDFVKNADLMIKQSVWSSAIAAKLATTHLKPGGLLQLTGAAAAM 133 (235)
T ss_dssp EECCCCCCCBCTTSTTHHHHHHHHHHHHHHHHHHHHHHHHHHEEEEEEEEEECCGGGG
T ss_pred EECCcccccccccccCcHHHHhhHhhhHHHHHHHHhhhcccccccceEEEEeccHHhc
Confidence 999883 1 013345667888999999876543
|
| >d1l7da1 c.2.1.4 (A:144-326) Nicotinamide nucleotide transhydrogenase dI component {Rhodospirillum rubrum [TaxId: 1085]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Nicotinamide nucleotide transhydrogenase dI component species: Rhodospirillum rubrum [TaxId: 1085]
Probab=97.85 E-value=7.3e-05 Score=56.91 Aligned_cols=104 Identities=16% Similarity=0.084 Sum_probs=74.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-ecCCc------------------hhHHH
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-NYKEE------------------PDLNE 213 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~------------------~~~~~ 213 (342)
.-+|+|+|+ |.+|+.|++.|+.+||+|.+.+.+.++++.++ +++...+- ++... ....+
T Consensus 29 pa~VvViGa-GvaG~~Aa~~A~~lGA~V~v~D~~~~~~~~l~-~l~~~~i~~~~~~~~~~~~~~gyA~~~s~~~~~~~~~ 106 (183)
T d1l7da1 29 PARVLVFGV-GVAGLQAIATAKRLGAVVMATDVRAATKEQVE-SLGGKFITVDDEAMKTAETAGGYAKEMGEEFRKKQAE 106 (183)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCSTTHHHHH-HTTCEECCC-----------------------CCHHH
T ss_pred CcEEEEEcC-cHHHHHHHHHHHHcCCEEEEEeccHHHHHHHH-HhhcceEEEeccccccccccccchhhcCHHHHHHHHH
Confidence 357999997 99999999999999999999999999999999 88764321 00000 01122
Q ss_pred HHHHHCCCCccEEEeCCCh---h----hHHHHHHhhhhCCEEEEEceeccccC
Q 019332 214 ALKRYFPEGIDIYFENVGG---K----MLDAVLLNMKIHGRIAVCGMISQYNL 259 (342)
Q Consensus 214 ~i~~~~~~~~d~vid~~g~---~----~~~~~~~~l~~~G~~v~~g~~~~~~~ 259 (342)
.+.+... ..|+||-++=- . .-+...+.++++..+|++....+-+.
T Consensus 107 ~l~~~l~-~aDlVI~talipG~~aP~lit~~mv~~Mk~GSVIVDvaidqGGn~ 158 (183)
T d1l7da1 107 AVLKELV-KTDIAITTALIPGKPAPVLITEEMVTKMKPGSVIIDLAVEAGGNC 158 (183)
T ss_dssp HHHHHHT-TCSEEEECCCCTTSCCCCCSCHHHHTTSCTTCEEEETTGGGTCSS
T ss_pred HHHHHHH-hhhhheeeeecCCcccceeehHHHHHhcCCCcEEEEEeecCCCcc
Confidence 2333222 38999976542 1 34678899999999999987666544
|
| >d1xhla_ c.2.1.2 (A:) Hypothetical protein F25D1.5 {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein F25D1.5 species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.83 E-value=1.7e-05 Score=65.80 Aligned_cols=80 Identities=20% Similarity=0.373 Sum_probs=56.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC--Ce----eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF--DE----AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~--~~----v~~~~~~~~~~~~i~~~~~-- 220 (342)
.|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.+++ +. .. ..|-.+..+..+.+.+...
T Consensus 3 ~gK~alITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~~~~~~~~~~~~~Dv~~~~~v~~~~~~~~~~~ 82 (274)
T d1xhla_ 3 SGKSVIITGSSNGIGRSAAVIFAKEGAQVTITGRNEDRLEETKQQILKAGVPAEKINAVVADVTEASGQDDIINTTLAKF 82 (274)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHcCCCCcceEEEEeeCCCHHHHHHHHHHHHHHc
Confidence 5789999999999999999999999999999999998877655333 32 11 2344444223333332221
Q ss_pred CCccEEEeCCC
Q 019332 221 EGIDIYFENVG 231 (342)
Q Consensus 221 ~~~d~vid~~g 231 (342)
|.+|++++++|
T Consensus 83 G~iDilVnnAG 93 (274)
T d1xhla_ 83 GKIDILVNNAG 93 (274)
T ss_dssp SCCCEEEECCC
T ss_pred CCceEEEeecc
Confidence 36999999987
|
| >d1spxa_ c.2.1.2 (A:) Glucose dehydrogenase (5l265) {Nematode (Caenorhabditis elegans) [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase (5l265) species: Nematode (Caenorhabditis elegans) [TaxId: 6239]
Probab=97.83 E-value=1.9e-05 Score=65.21 Aligned_cols=81 Identities=15% Similarity=0.288 Sum_probs=56.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CC--Ce----eEecCCchhHHHHHHHHCC--
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GF--DE----AFNYKEEPDLNEALKRYFP-- 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~--~~----v~~~~~~~~~~~~i~~~~~-- 220 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++.+.+.+++ +. .. ..|..+..+..+.+.+...
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~~Dvt~~~~v~~~~~~~~~~~ 83 (264)
T d1spxa_ 4 AEKVAIITGSSNGIGRATAVLFAREGAKVTITGRHAERLEETRQQILAAGVSEQNVNSVVADVTTDAGQDEILSTTLGKF 83 (264)
T ss_dssp TTCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCGGGEEEEECCTTSHHHHHHHHHHHHHHH
T ss_pred CCCEEEEeCcCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCCcCceEEEEccCCCHHHHHHHHHHHHHHh
Confidence 5789999999999999999999999999999999998877665333 22 11 2344444233333332221
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
|++|++++++|.
T Consensus 84 g~iDilvnnAG~ 95 (264)
T d1spxa_ 84 GKLDILVNNAGA 95 (264)
T ss_dssp SCCCEEEECCC-
T ss_pred CCCCEeeccccc
Confidence 369999999873
|
| >d1yxma1 c.2.1.2 (A:7-303) Peroxisomal trans 2-enoyl CoA reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Peroxisomal trans 2-enoyl CoA reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.82 E-value=2.1e-05 Score=66.00 Aligned_cols=83 Identities=18% Similarity=0.290 Sum_probs=57.6
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc--------CCCe---eEecCCchhHHHHHHHH
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF--------GFDE---AFNYKEEPDLNEALKRY 218 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~--------g~~~---v~~~~~~~~~~~~i~~~ 218 (342)
.-+|.++||+||++++|.+.++.+...|++|++++++.++.+.+.+++ +... ..|-.+..++.+.+.+.
T Consensus 9 ~L~gKvalITGas~GIG~aia~~la~~Ga~Vvi~~r~~~~l~~~~~el~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~~ 88 (297)
T d1yxma1 9 LLQGQVAIVTGGATGIGKAIVKELLELGSNVVIASRKLERLKSAADELQANLPPTKQARVIPIQCNIRNEEEVNNLVKST 88 (297)
T ss_dssp TTTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTSCTTCCCCEEEEECCTTCHHHHHHHHHHH
T ss_pred CCCCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhhhccccCceEEEEeccCCCHHHHHHHHHHH
Confidence 357899999999999999999999999999999999988776554333 1111 12444442333333332
Q ss_pred CC--CCccEEEeCCCh
Q 019332 219 FP--EGIDIYFENVGG 232 (342)
Q Consensus 219 ~~--~~~d~vid~~g~ 232 (342)
.. |++|++++++|.
T Consensus 89 ~~~~G~iDiLVnnAg~ 104 (297)
T d1yxma1 89 LDTFGKINFLVNNGGG 104 (297)
T ss_dssp HHHHSCCCEEEECCCC
T ss_pred HHHhCCeEEEEeeccc
Confidence 21 369999999883
|
| >d1gpja2 c.2.1.7 (A:144-302) Glutamyl tRNA-reductase middle domain {Archaeon Methanopyrus kandleri [TaxId: 2320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamyl tRNA-reductase middle domain species: Archaeon Methanopyrus kandleri [TaxId: 2320]
Probab=97.82 E-value=0.00022 Score=53.63 Aligned_cols=73 Identities=21% Similarity=0.289 Sum_probs=57.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-.+.+|||.|+ |.+|..+++.+...|+ +++++.|+.+|.+.+.+++|. .+.++. ++.+.+.+ +|+||.|
T Consensus 22 l~~~~ilviGa-G~~g~~v~~~L~~~g~~~i~v~nRt~~ka~~l~~~~~~-~~~~~~---~~~~~l~~-----~Divi~a 91 (159)
T d1gpja2 22 LHDKTVLVVGA-GEMGKTVAKSLVDRGVRAVLVANRTYERAVELARDLGG-EAVRFD---ELVDHLAR-----SDVVVSA 91 (159)
T ss_dssp CTTCEEEEESC-CHHHHHHHHHHHHHCCSEEEEECSSHHHHHHHHHHHTC-EECCGG---GHHHHHHT-----CSEEEEC
T ss_pred cccCeEEEECC-CHHHHHHHHHHHhcCCcEEEEEcCcHHHHHHHHHhhhc-ccccch---hHHHHhcc-----CCEEEEe
Confidence 46678999997 9999999999988998 799999998887766658886 344443 45555543 9999999
Q ss_pred CChh
Q 019332 230 VGGK 233 (342)
Q Consensus 230 ~g~~ 233 (342)
+++.
T Consensus 92 tss~ 95 (159)
T d1gpja2 92 TAAP 95 (159)
T ss_dssp CSSS
T ss_pred cCCC
Confidence 9873
|
| >d1jg1a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=97.82 E-value=9.9e-06 Score=64.44 Aligned_cols=112 Identities=15% Similarity=0.238 Sum_probs=75.0
Q ss_pred ccCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCc
Q 019332 132 ILGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEE 208 (342)
Q Consensus 132 ~l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~ 208 (342)
+++.+...|. .+ +..++++|++||..| +|.|+.++-+++..|.+|+++..+++-.+.+++ ++|.+.+.....
T Consensus 60 ~is~P~~~a~-ml-~~L~l~~g~~VLeIG--sGsGY~taila~l~g~~V~~ie~~~~l~~~a~~~l~~~g~~nv~~~~g- 134 (215)
T d1jg1a_ 60 TVSAPHMVAI-ML-EIANLKPGMNILEVG--TGSGWNAALISEIVKTDVYTIERIPELVEFAKRNLERAGVKNVHVILG- 134 (215)
T ss_dssp EECCHHHHHH-HH-HHHTCCTTCCEEEEC--CTTSHHHHHHHHHHCSCEEEEESCHHHHHHHHHHHHHTTCCSEEEEES-
T ss_pred hhhhhhhHHH-HH-HhhccCccceEEEec--CCCChhHHHHHHhhCceeEEEeccHHHHHHHHHHHHHcCCceeEEEEC-
Confidence 4444544443 33 567899999999999 678999999999889899999988764444432 567654322222
Q ss_pred hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+..+-..+ .+.||.|+-+.+- ..-...++.|+++|+++..
T Consensus 135 -d~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qL~~gGrLv~p 175 (215)
T d1jg1a_ 135 -DGSKGFPP--KAPYDVIIVTAGAPKIPEPLIEQLKIGGKLIIP 175 (215)
T ss_dssp -CGGGCCGG--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred -ccccCCcc--cCcceeEEeecccccCCHHHHHhcCCCCEEEEE
Confidence 11111111 1269999876665 4456788999999999863
|
| >d1yo6a1 c.2.1.2 (A:1-250) Putative carbonyl reductase sniffer {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Putative carbonyl reductase sniffer species: Caenorhabditis elegans [TaxId: 6239]
Probab=97.82 E-value=2.7e-05 Score=63.74 Aligned_cols=80 Identities=14% Similarity=0.125 Sum_probs=56.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCC-e--eEecCCch---hHHHHHHHHCCC-Cc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFD-E--AFNYKEEP---DLNEALKRYFPE-GI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~-~--v~~~~~~~---~~~~~i~~~~~~-~~ 223 (342)
..+|||+||++|+|.+.++.+...|+ +|+.++++.++.+.+++..+.. . .+|..+.. .+.+.+.+..+. ++
T Consensus 3 ~KtilITGassGIG~a~a~~la~~G~~~~Vi~~~R~~~~~~~l~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~~i 82 (250)
T d1yo6a1 3 PGSVVVTGANRGIGLGLVQQLVKDKNIRHIIATARDVEKATELKSIKDSRVHVLPLTVTCDKSLDTFVSKVGEIVGSDGL 82 (250)
T ss_dssp CSEEEESSCSSHHHHHHHHHHHTCTTCCEEEEEESSGGGCHHHHTCCCTTEEEEECCTTCHHHHHHHHHHHHHHHGGGCC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCCCEEEEEeCCHHHHHHHHHhhCCceEEEEEecCCHHHHHHHHHHHHHHhCCCCe
Confidence 37899999999999998888777786 7999999999888887333332 2 23444431 234444444444 69
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 83 dilinnAG~ 91 (250)
T d1yo6a1 83 SLLINNAGV 91 (250)
T ss_dssp CEEEECCCC
T ss_pred EEEEEcCcc
Confidence 999999983
|
| >d1o54a_ c.66.1.13 (A:) Hypothetical protein TM0748 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein TM0748 species: Thermotoga maritima [TaxId: 2336]
Probab=97.81 E-value=4.2e-05 Score=62.91 Aligned_cols=101 Identities=22% Similarity=0.315 Sum_probs=71.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
...++++|++||=.|+ |.|..++.+|+..| .+|++++.+++..+.+++ ++|....+..... +. .....
T Consensus 97 ~~l~i~pG~~VLDiG~--GsG~lt~~lA~~~~~~G~V~~vD~~~~~~~~A~~~~~~~g~~~~v~~~~~-d~----~~~~~ 169 (266)
T d1o54a_ 97 MMLDVKEGDRIIDTGV--GSGAMCAVLARAVGSSGKVFAYEKREEFAKLAESNLTKWGLIERVTIKVR-DI----SEGFD 169 (266)
T ss_dssp HHTTCCTTCEEEEECC--TTSHHHHHHHHHTTTTCEEEEECCCHHHHHHHHHHHHHTTCGGGEEEECC-CG----GGCCS
T ss_pred HhhCCCCCCEEEECCC--CCCHHHHHHHHHhCCCcEEEEEeCCHHHHHHHHHHHHHhccccCcEEEec-cc----ccccc
Confidence 5589999999999984 55888889999875 599999999988877764 3454222222221 21 11222
Q ss_pred C-CccEEEeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 221 E-GIDIYFENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 221 ~-~~d~vid~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
. .+|.|+--... ..++.+.++|+|+|+++.+..
T Consensus 170 ~~~~D~V~~d~p~p~~~l~~~~~~LKpGG~lv~~~P 205 (266)
T d1o54a_ 170 EKDVDALFLDVPDPWNYIDKCWEALKGGGRFATVCP 205 (266)
T ss_dssp CCSEEEEEECCSCGGGTHHHHHHHEEEEEEEEEEES
T ss_pred ccceeeeEecCCCHHHHHHHHHhhcCCCCEEEEEeC
Confidence 3 68876554554 688999999999999987643
|
| >d1h5qa_ c.2.1.2 (A:) Mannitol dehydrogenase {Mushroom (Agaricus bisporus) [TaxId: 5341]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Mannitol dehydrogenase species: Mushroom (Agaricus bisporus) [TaxId: 5341]
Probab=97.80 E-value=2.2e-05 Score=64.62 Aligned_cols=79 Identities=11% Similarity=0.137 Sum_probs=56.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH----HcCCC---eeEecCCchhH---HHHHHHHCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN----KFGFD---EAFNYKEEPDL---NEALKRYFPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~----~~g~~---~v~~~~~~~~~---~~~i~~~~~~ 221 (342)
.|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.+ +.|.. ...|-.+..+. .+++.+.. |
T Consensus 8 ~gK~alITGas~GIG~aia~~la~~Ga~V~i~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g 86 (260)
T d1h5qa_ 8 VNKTIIVTGGNRGIGLAFTRAVAAAGANVAVIYRSAADAVEVTEKVGKEFGVKTKAYQCDVSNTDIVTKTIQQIDADL-G 86 (260)
T ss_dssp TTEEEEEETTTSHHHHHHHHHHHHTTEEEEEEESSCTTHHHHHHHHHHHHTCCEEEEECCTTCHHHHHHHHHHHHHHS-C
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHHHhCCceEEEEccCCCHHHHHHHHHHHHHHh-C
Confidence 47899999999999999999999999999999998876654332 34543 12344454233 33333332 4
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
++|++++++|
T Consensus 87 ~iDilVnnAg 96 (260)
T d1h5qa_ 87 PISGLIANAG 96 (260)
T ss_dssp SEEEEEECCC
T ss_pred CCcEeccccc
Confidence 6999999988
|
| >d2rhca1 c.2.1.2 (A:5-261) beta-keto acyl carrier protein reductase {Streptomyces coelicolor [TaxId: 1902]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Streptomyces coelicolor [TaxId: 1902]
Probab=97.80 E-value=2.4e-05 Score=64.29 Aligned_cols=79 Identities=15% Similarity=0.306 Sum_probs=55.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe---eEecCCchhHH---HHHHHHCCCCc
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE---AFNYKEEPDLN---EALKRYFPEGI 223 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~~~---~~i~~~~~~~~ 223 (342)
|..+||+||++|+|.+.++.+...|++|+++++++++.+.+.++ .|... ..|-.+..++. +.+.+.. |++
T Consensus 2 gKValITGas~GIG~aia~~la~~Ga~V~i~~r~~~~l~~~~~~l~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~-g~i 80 (257)
T d2rhca1 2 SEVALVTGATSGIGLEIARRLGKEGLRVFVCARGEEGLRTTLKELREAGVEADGRTCDVRSVPEIEALVAAVVERY-GPV 80 (257)
T ss_dssp CCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHT-CSC
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeecCCHHHHHHHHHHHHHHh-CCC
Confidence 55679999999999999999999999999999998877655433 34321 23444442333 3333333 469
Q ss_pred cEEEeCCCh
Q 019332 224 DIYFENVGG 232 (342)
Q Consensus 224 d~vid~~g~ 232 (342)
|++++++|.
T Consensus 81 DilVnnAG~ 89 (257)
T d2rhca1 81 DVLVNNAGR 89 (257)
T ss_dssp SEEEECCCC
T ss_pred CEEEecccc
Confidence 999999883
|
| >d1o5ia_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Thermotoga maritima [TaxId: 2336]
Probab=97.77 E-value=7.2e-05 Score=60.40 Aligned_cols=73 Identities=25% Similarity=0.341 Sum_probs=53.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+|.++||+||++++|.+.++.+...|++|+++++++++. + +.+... ..|.++ . .+.+.+.. +.+|++++++
T Consensus 3 kgK~~lVTGas~GIG~aia~~l~~~Ga~V~~~~r~~~~l---~-~~~~~~~~~Dv~~--~-~~~~~~~~-g~iD~lVnnA 74 (234)
T d1o5ia_ 3 RDKGVLVLAASRGIGRAVADVLSQEGAEVTICARNEELL---K-RSGHRYVVCDLRK--D-LDLLFEKV-KEVDILVLNA 74 (234)
T ss_dssp TTCEEEEESCSSHHHHHHHHHHHHTTCEEEEEESCHHHH---H-HTCSEEEECCTTT--C-HHHHHHHS-CCCSEEEECC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEECCHHHH---H-hcCCcEEEcchHH--H-HHHHHHHh-CCCcEEEecc
Confidence 578999999999999999999999999999999987654 3 455432 223332 2 33344433 3599999998
Q ss_pred Ch
Q 019332 231 GG 232 (342)
Q Consensus 231 g~ 232 (342)
|.
T Consensus 75 G~ 76 (234)
T d1o5ia_ 75 GG 76 (234)
T ss_dssp CC
T ss_pred cc
Confidence 83
|
| >d1w6ua_ c.2.1.2 (A:) 2,4-dienoyl-CoA reductase, mitochondrial (DECR) {Human (Homo sapiens), [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 2,4-dienoyl-CoA reductase, mitochondrial (DECR) species: Human (Homo sapiens), [TaxId: 9606]
Probab=97.76 E-value=2.8e-05 Score=65.20 Aligned_cols=81 Identities=17% Similarity=0.279 Sum_probs=56.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH----HcCCCe-e--EecCCchhHHHHHHHHC--CCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN----KFGFDE-A--FNYKEEPDLNEALKRYF--PEG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~----~~g~~~-v--~~~~~~~~~~~~i~~~~--~~~ 222 (342)
.|.++||+||++++|.+.++.+...|++|+++.+++++.+.+.+ +.|... . .|..+.......+.... .++
T Consensus 24 ~gK~alITGas~GIG~aiA~~la~~Ga~Vii~~r~~~~l~~~~~~l~~~~g~~~~~~~~D~~~~~~v~~~~~~~~~~~g~ 103 (294)
T d1w6ua_ 24 QGKVAFITGGGTGLGKGMTTLLSSLGAQCVIASRKMDVLKATAEQISSQTGNKVHAIQCDVRDPDMVQNTVSELIKVAGH 103 (294)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHHHSSCEEEEECCTTCHHHHHHHHHHHHHHTCS
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHcCCEEEEEECCHHHHHHHHHHHHHhcCCceEEEEecccChHHHHHHhhhhhhhccc
Confidence 56899999999999999999999999999999999887654432 334422 2 24444312222222221 247
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 104 iDilvnnAg~ 113 (294)
T d1w6ua_ 104 PNIVINNAAG 113 (294)
T ss_dssp CSEEEECCCC
T ss_pred cchhhhhhhh
Confidence 9999999984
|
| >d1geea_ c.2.1.2 (A:) Glucose dehydrogenase {Bacillus megaterium [TaxId: 1404]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Glucose dehydrogenase species: Bacillus megaterium [TaxId: 1404]
Probab=97.73 E-value=4.5e-05 Score=62.68 Aligned_cols=81 Identities=20% Similarity=0.223 Sum_probs=54.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh-hHHHHHH---HcCCCe---eEecCCchhHHHHHHHHCC--CC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD-KIDLLKN---KFGFDE---AFNYKEEPDLNEALKRYFP--EG 222 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~-~~~~~~~---~~g~~~---v~~~~~~~~~~~~i~~~~~--~~ 222 (342)
.|.++||+||++++|.+.++.+...|++|+++.++.+ +.+.+.+ +.|... ..|-.+..+..+.+++... |+
T Consensus 6 ~gK~alITGas~GIG~aia~~la~~G~~Vv~~~r~~~~~~~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~~G~ 85 (261)
T d1geea_ 6 EGKVVVITGSSTGLGKSMAIRFATEKAKVVVNYRSKEDEANSVLEEIKKVGGEAIAVKGDVTVESDVINLVQSAIKEFGK 85 (261)
T ss_dssp TTCEEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHTTCEEEEEECCTTSHHHHHHHHHHHHHHHSC
T ss_pred CCCEEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCcHHHHHHHHHHHHhcCCcEEEEEccCCCHHHHHHHHHHHHHHhCC
Confidence 5789999999999999999988899999999998754 3333321 445421 2344444233222332221 36
Q ss_pred ccEEEeCCCh
Q 019332 223 IDIYFENVGG 232 (342)
Q Consensus 223 ~d~vid~~g~ 232 (342)
+|++++++|.
T Consensus 86 iDiLVnnAG~ 95 (261)
T d1geea_ 86 LDVMINNAGL 95 (261)
T ss_dssp CCEEEECCCC
T ss_pred CCEeecccee
Confidence 9999999884
|
| >d1edoa_ c.2.1.2 (A:) beta-keto acyl carrier protein reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=97.72 E-value=9.4e-05 Score=60.06 Aligned_cols=101 Identities=21% Similarity=0.243 Sum_probs=66.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEe-CChhhHHHHHH---HcCCC---eeEecCCchh---HHHHHHHHCCCCcc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSA-GSKDKIDLLKN---KFGFD---EAFNYKEEPD---LNEALKRYFPEGID 224 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~-~s~~~~~~~~~---~~g~~---~v~~~~~~~~---~~~~i~~~~~~~~d 224 (342)
.+||+||++++|.+.++.+...|++|++++ +++++.+.+.+ +.|.. ...|-.+..+ +.+.+.+.. |++|
T Consensus 3 V~lITGas~GIG~a~a~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iD 81 (244)
T d1edoa_ 3 VVVVTGASRGIGKAIALSLGKAGCKVLVNYARSAKAAEEVSKQIEAYGGQAITFGGDVSKEADVEAMMKTAIDAW-GTID 81 (244)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHHHHHHHHTCEEEEEECCTTSHHHHHHHHHHHHHHS-SCCS
T ss_pred EEEEeCCCcHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHHHHHcCCcEEEEeCCCCCHHHHHHHHHHHHHHc-CCCC
Confidence 579999999999999999999999998875 45555554432 34542 1234444422 333333333 4699
Q ss_pred EEEeCCChh--------------------------hHHHHHHhh--hhCCEEEEEceecc
Q 019332 225 IYFENVGGK--------------------------MLDAVLLNM--KIHGRIAVCGMISQ 256 (342)
Q Consensus 225 ~vid~~g~~--------------------------~~~~~~~~l--~~~G~~v~~g~~~~ 256 (342)
++++++|.. ....+++.| +.+|++|.+++...
T Consensus 82 iLVnnAg~~~~~~~~~~~~~~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~IVnisS~~~ 141 (244)
T d1edoa_ 82 VVVNNAGITRDTLLIRMKKSQWDEVIDLNLTGVFLCTQAATKIMMKKRKGRIINIASVVG 141 (244)
T ss_dssp EEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCTHH
T ss_pred ccccccccccccchhccchHHHHHHHhhhhhhHHHHHHHHHHHHHHcCCcEEEEEcChhh
Confidence 999999831 123455555 34799999987554
|
| >d2ew8a1 c.2.1.2 (A:3-249) (s)-1-phenylethanol dehydrogenase {Azoarcus sp. ebn1 [TaxId: 76114]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: (s)-1-phenylethanol dehydrogenase species: Azoarcus sp. ebn1 [TaxId: 76114]
Probab=97.70 E-value=7e-05 Score=61.01 Aligned_cols=106 Identities=15% Similarity=0.163 Sum_probs=69.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh-HHHHHHHcCCCe---eEecCCchhHHHHHHHHCC--CCccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK-IDLLKNKFGFDE---AFNYKEEPDLNEALKRYFP--EGIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~-~~~~~~~~g~~~---v~~~~~~~~~~~~i~~~~~--~~~d~ 225 (342)
+|.++||+||++++|.+.++.+...|++|+++.+++++ .+...++.|... ..|-.+..++.+.+.+... |++|+
T Consensus 4 ~gKvalVTGas~GIG~aia~~la~~Ga~V~~~~~~~~~~~~~~~~~~g~~~~~~~~Dvs~~~~v~~~~~~~~~~~G~iDi 83 (247)
T d2ew8a1 4 KDKLAVITGGANGIGRAIAERFAVEGADIAIADLVPAPEAEAAIRNLGRRVLTVKCDVSQPGDVEAFGKQVISTFGRCDI 83 (247)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCHHHHHHHHHTTCCEEEEECCTTCHHHHHHHHHHHHHHHSCCCE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchHHHHHHHHHcCCcEEEEEeeCCCHHHHHHHHHHHHHHcCCCCE
Confidence 47899999999999999999999999999999987643 222222666532 2344444233333322221 36999
Q ss_pred EEeCCCh-h----------h---------------HHHHHHhhhh--CCEEEEEceeccc
Q 019332 226 YFENVGG-K----------M---------------LDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 226 vid~~g~-~----------~---------------~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
+++++|. . . ...+++.++. +|++|.+++....
T Consensus 84 lVnnAG~~~~~~~~~~~~e~~~~~~~vNl~~~~~~~~~~~~~m~~~~~G~Iv~isS~~~~ 143 (247)
T d2ew8a1 84 LVNNAGIYPLIPFDELTFEQWKKTFEINVDSGFLMAKAFVPGMKRNGWGRIINLTSTTYW 143 (247)
T ss_dssp EEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGG
T ss_pred EEECCCCCCCCChHhCCHHHhhhhheeehhhhhHHHHHHHhHHHhcCCCCccccccchhc
Confidence 9999984 1 1 2334455543 5899999876553
|
| >d2bd0a1 c.2.1.2 (A:2-241) Bacterial sepiapterin reductase {Chlorobium tepidum [TaxId: 1097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Bacterial sepiapterin reductase species: Chlorobium tepidum [TaxId: 1097]
Probab=97.70 E-value=7.8e-05 Score=60.41 Aligned_cols=102 Identities=16% Similarity=0.203 Sum_probs=67.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCE-------EEEEeCChhhHHHHHHHc---CCC-e--eEecCCchh---HHHHHHHH
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCY-------VVGSAGSKDKIDLLKNKF---GFD-E--AFNYKEEPD---LNEALKRY 218 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~-------Vi~~~~s~~~~~~~~~~~---g~~-~--v~~~~~~~~---~~~~i~~~ 218 (342)
-|||+||++|+|.+.+..+...|++ |+...+++++.+.+.+++ |.. . ..|-.+..+ +.+.+.+.
T Consensus 3 VvlITGas~GIG~aia~~la~~G~~~~~~~~~v~~~~r~~~~l~~~~~~~~~~g~~~~~~~~Dvt~~~~v~~~~~~~~~~ 82 (240)
T d2bd0a1 3 ILLITGAGKGIGRAIALEFARAARHHPDFEPVLVLSSRTAADLEKISLECRAEGALTDTITADISDMADVRRLTTHIVER 82 (240)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHTTTCTTCCEEEEEEESCHHHHHHHHHHHHTTTCEEEEEECCTTSHHHHHHHHHHHHHH
T ss_pred EEEEccCCCHHHHHHHHHHHHhCccccccCcEEEEEeCCHHHHHHHHHHHHhcCCcEEEEEecCCCHHHHHHHHHHHHHH
Confidence 4799999999999988888888887 889999988877665333 332 1 234444422 23333333
Q ss_pred CCCCccEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceeccc
Q 019332 219 FPEGIDIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 219 ~~~~~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
. |.+|++++++|.. ....+++.|+. +|+++.+++....
T Consensus 83 ~-g~iDilvnnAg~~~~~~~~~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~G~Ii~isS~~~~ 148 (240)
T d2bd0a1 83 Y-GHIDCLVNNAGVGRFGALSDLTEEDFDYTMNTNLKGTFFLTQALFALMERQHSGHIFFITSVAAT 148 (240)
T ss_dssp T-SCCSEEEECCCCCCCCCGGGCCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEECCGGGT
T ss_pred c-CCcceeecccccccCCccccCCHHHHhhcCCEeehHHHHHHHHHhHHHHhcCCCceEEEechhhc
Confidence 3 3699999999831 12345556643 6899999876553
|
| >d1vbfa_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Sulfolobus tokodaii [TaxId: 111955]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Sulfolobus tokodaii [TaxId: 111955]
Probab=97.67 E-value=2.9e-05 Score=62.10 Aligned_cols=107 Identities=10% Similarity=0.058 Sum_probs=70.5
Q ss_pred CCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC-C--eeEecCCchh
Q 019332 134 GMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF-D--EAFNYKEEPD 210 (342)
Q Consensus 134 ~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~-~--~v~~~~~~~~ 210 (342)
..+...|. .+ +..++++|++||-.| +|.|+.++.+++. +.+|+++..+++-.+.+++.+.. . .++.. +
T Consensus 54 ~~p~~~a~-ml-~~L~l~~g~~VLdIG--~GsGy~ta~La~l-~~~V~aiE~~~~~~~~A~~~~~~~~nv~~~~~----d 124 (224)
T d1vbfa_ 54 TALNLGIF-ML-DELDLHKGQKVLEIG--TGIGYYTALIAEI-VDKVVSVEINEKMYNYASKLLSYYNNIKLILG----D 124 (224)
T ss_dssp CCHHHHHH-HH-HHTTCCTTCEEEEEC--CTTSHHHHHHHHH-SSEEEEEESCHHHHHHHHHHHTTCSSEEEEES----C
T ss_pred ehhhhHHH-HH-HHhhhcccceEEEec--CCCCHHHHHHHHH-hcccccccccHHHHHHHHHHHhcccccccccC----c
Confidence 33444443 33 567899999999999 4678888888876 67999999999887777743332 1 12221 1
Q ss_pred HHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 211 LNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 211 ~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
......+ .+.||.|+-+.+- ......++.|++||++|..
T Consensus 125 ~~~g~~~--~~pfD~Iiv~~a~~~ip~~l~~qLk~GGrLV~p 164 (224)
T d1vbfa_ 125 GTLGYEE--EKPYDRVVVWATAPTLLCKPYEQLKEGGIMILP 164 (224)
T ss_dssp GGGCCGG--GCCEEEEEESSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred hhhcchh--hhhHHHHHhhcchhhhhHHHHHhcCCCCEEEEE
Confidence 1111111 1359998866655 4556778999999999874
|
| >d1gega_ c.2.1.2 (A:) meso-2,3-butanediol dehydrogenase {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: meso-2,3-butanediol dehydrogenase species: Klebsiella pneumoniae [TaxId: 573]
Probab=97.65 E-value=5.1e-05 Score=62.19 Aligned_cols=77 Identities=13% Similarity=0.184 Sum_probs=54.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCe---eEecCCchh---HHHHHHHHCCCCccE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDE---AFNYKEEPD---LNEALKRYFPEGIDI 225 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~---v~~~~~~~~---~~~~i~~~~~~~~d~ 225 (342)
.+||+||++|+|.+.++.+...|++|+++++++++.+.+.++ .|... ..|-.+..+ +.+.+.+.. |++|+
T Consensus 3 ValITGas~GIG~aia~~la~~Ga~V~~~~r~~~~l~~~~~~i~~~g~~~~~~~~Dv~~~~~v~~~~~~~~~~~-g~iDi 81 (255)
T d1gega_ 3 VALVTGAGQGIGKAIALRLVKDGFAVAIADYNDATAKAVASEINQAGGHAVAVKVDVSDRDQVFAAVEQARKTL-GGFDV 81 (255)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHHHTTCCEEEEECCTTSHHHHHHHHHHHHHHT-TCCCE
T ss_pred EEEEcCCccHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHHHhcCCcEEEEEeeCCCHHHHHHHHHHHHHHh-CCccE
Confidence 469999999999999888888899999999999887665433 34321 234444422 233333332 46999
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
+++++|.
T Consensus 82 lVnnAG~ 88 (255)
T d1gega_ 82 IVNNAGV 88 (255)
T ss_dssp EEECCCC
T ss_pred EEecccc
Confidence 9999883
|
| >d1sbya1 c.2.1.2 (A:1-254) Drosophila alcohol dehydrogenase {Fly (Drosophila lebanonensis) [TaxId: 7225]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Drosophila alcohol dehydrogenase species: Fly (Drosophila lebanonensis) [TaxId: 7225]
Probab=97.60 E-value=3.3e-05 Score=63.30 Aligned_cols=105 Identities=13% Similarity=0.051 Sum_probs=66.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe----eEecC-CchhH---HHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE----AFNYK-EEPDL---NEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~----v~~~~-~~~~~---~~~i~~~~~ 220 (342)
.|.+|||+||++|+|.+.+......|++|++++++.++.+.+.+ ..+-.. ..|.. +...+ .+.+.+..
T Consensus 4 ~gK~vlITGgs~GIG~~~A~~la~~G~~vii~~r~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~- 82 (254)
T d1sbya1 4 TNKNVIFVAALGGIGLDTSRELVKRNLKNFVILDRVENPTALAELKAINPKVNITFHTYDVTVPVAESKKLLKKIFDQL- 82 (254)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTCCSEEEEEESSCCHHHHHHHHHHCTTSEEEEEECCTTSCHHHHHHHHHHHHHHH-
T ss_pred CCCEEEEecCCCHHHHHHHHHHHHCCCEEEEEECCcccHHHHHHHHhhCCCCCEEEEEeecCCCHHHHHHHHHHHHHHc-
Confidence 47899999999999999999888899999998877665444431 222222 22332 21122 23333322
Q ss_pred CCccEEEeCCCh-h--h---------------HHHHHHhhh-----hCCEEEEEceeccc
Q 019332 221 EGIDIYFENVGG-K--M---------------LDAVLLNMK-----IHGRIAVCGMISQY 257 (342)
Q Consensus 221 ~~~d~vid~~g~-~--~---------------~~~~~~~l~-----~~G~~v~~g~~~~~ 257 (342)
|++|++++++|. + . ...+++.+. ++|+++.+++....
T Consensus 83 g~iDilvnnAG~~~~~~~~~~~~vNl~g~~~~~~~~~~~m~~~~~~~~g~Ii~isS~~~~ 142 (254)
T d1sbya1 83 KTVDILINGAGILDDHQIERTIAINFTGLVNTTTAILDFWDKRKGGPGGIIANICSVTGF 142 (254)
T ss_dssp SCCCEEEECCCCCCTTCHHHHHHHHTHHHHHHHHHHHHHHCGGGTCCCEEEEEECCGGGT
T ss_pred CCCCEEEeCCCCCCHHHHHHHHHHHhHHHHHHHHHHHHHhhhcccCCCceEEEEechhhc
Confidence 369999999995 1 1 223344442 25889988876653
|
| >d1dl5a1 c.66.1.7 (A:1-213) Protein-L-isoaspartyl O-methyltransferase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Thermotoga maritima [TaxId: 2336]
Probab=97.57 E-value=6.5e-05 Score=59.68 Aligned_cols=100 Identities=20% Similarity=0.242 Sum_probs=68.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
+..++++|++||-.| +|.|..++.+|+..| .+|+++..+++..+.+++. .+...+.-... +..+... ..
T Consensus 69 ~~l~l~~g~~VLdiG--~GtG~~s~~la~~~~~~g~V~~id~~~~~~~~a~~~~~~~~~~n~~~~~~--d~~~~~~--~~ 142 (213)
T d1dl5a1 69 EWVGLDKGMRVLEIG--GGTGYNAAVMSRVVGEKGLVVSVEYSRKICEIAKRNVERLGIENVIFVCG--DGYYGVP--EF 142 (213)
T ss_dssp HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHTTCCSEEEEES--CGGGCCG--GG
T ss_pred HhhhccccceEEEec--CccchhHHHHHHHhCCCCcEEEeecchhhHHHhhhhHhhhcccccccccC--chHHccc--cc
Confidence 567899999999999 456888999999876 4899999999877777643 23432211111 1110000 11
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.||+|+.+.+- ...+..++.|+|+|+++..
T Consensus 143 ~~fD~I~~~~~~~~~p~~l~~~LkpGG~lv~p 174 (213)
T d1dl5a1 143 SPYDVIFVTVGVDEVPETWFTQLKEGGRVIVP 174 (213)
T ss_dssp CCEEEEEECSBBSCCCHHHHHHEEEEEEEEEE
T ss_pred cchhhhhhhccHHHhHHHHHHhcCCCcEEEEE
Confidence 259999987766 4446788999999999863
|
| >d1npya1 c.2.1.7 (A:103-269) Shikimate 5-dehydrogenase-like protein HI0607 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase-like protein HI0607 species: Haemophilus influenzae [TaxId: 727]
Probab=97.57 E-value=0.00017 Score=54.75 Aligned_cols=72 Identities=18% Similarity=0.141 Sum_probs=55.6
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCcc
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
+..++.++.+|||.|+ ||.+.+++..++..|+ ++.++.|+.+|.+.+.+.++...+ +... ...+|
T Consensus 10 ~~~~~~~~~~vlIlGa-GGaarai~~aL~~~g~~~I~I~nR~~~ka~~L~~~~~~~~~-~~~~------------~~~~D 75 (167)
T d1npya1 10 EKYHLNKNAKVIVHGS-GGMAKAVVAAFKNSGFEKLKIYARNVKTGQYLAALYGYAYI-NSLE------------NQQAD 75 (167)
T ss_dssp HHTTCCTTSCEEEECS-STTHHHHHHHHHHTTCCCEEEECSCHHHHHHHHHHHTCEEE-SCCT------------TCCCS
T ss_pred HHcCCCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEecccHHHHHHHHHhhhhhhh-hccc------------ccchh
Confidence 4456667889999997 9999999999999998 899999999998887756765432 2111 12489
Q ss_pred EEEeCCC
Q 019332 225 IYFENVG 231 (342)
Q Consensus 225 ~vid~~g 231 (342)
++++|..
T Consensus 76 liINaTp 82 (167)
T d1npya1 76 ILVNVTS 82 (167)
T ss_dssp EEEECSS
T ss_pred hheeccc
Confidence 9999875
|
| >d1uzma1 c.2.1.2 (A:9-245) beta-keto acyl carrier protein reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: beta-keto acyl carrier protein reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.50 E-value=2.7e-05 Score=63.08 Aligned_cols=75 Identities=12% Similarity=0.139 Sum_probs=52.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH---HHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN---EALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~---~~i~~~~~~~~d~vid 228 (342)
.|.++||+||++++|.+.++.+...|++|+++.+++++.+.+. ....|..+..+.. +.+.+.. |++|++++
T Consensus 6 ~gK~~lITGas~GIG~aia~~la~~Ga~V~~~~r~~~~~~~~~-----~~~~Dv~~~~~v~~~~~~~~~~~-g~iDiLVn 79 (237)
T d1uzma1 6 VSRSVLVTGGNRGIGLAIAQRLAADGHKVAVTHRGSGAPKGLF-----GVEVDVTDSDAVDRAFTAVEEHQ-GPVEVLVS 79 (237)
T ss_dssp CCCEEEETTTTSHHHHHHHHHHHHTTCEEEEEESSSCCCTTSE-----EEECCTTCHHHHHHHHHHHHHHH-SSCSEEEE
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCcchhcCce-----EEEEecCCHHHHHHHHHHHHHhc-CCceEEEe
Confidence 5789999999999999999999999999999999876543221 1224444442222 3333322 36999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
++|.
T Consensus 80 nAG~ 83 (237)
T d1uzma1 80 NAGL 83 (237)
T ss_dssp ECSC
T ss_pred eecc
Confidence 9883
|
| >d1kpia_ c.66.1.18 (A:) CmaA2 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA2 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.47 E-value=0.00037 Score=57.84 Aligned_cols=101 Identities=11% Similarity=0.068 Sum_probs=69.8
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
+.+..++++|++||=+| .|.|-.+..+|+..|++|++++.|+++.+.+++ +.|....+..... ++ ....
T Consensus 53 ~~~~l~l~~G~~VLDiG--CG~G~~~~~~a~~~g~~v~git~s~~q~~~a~~~~~~~~l~~~v~~~~~-d~-----~~~~ 124 (291)
T d1kpia_ 53 ALDKLNLEPGMTLLDIG--CGWGSTMRHAVAEYDVNVIGLTLSENQYAHDKAMFDEVDSPRRKEVRIQ-GW-----EEFD 124 (291)
T ss_dssp HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHSCCSSCEEEEEC-CG-----GGCC
T ss_pred HHHhcCCCCCCEEEEec--CcchHHHHHHHHhcCcceeeccchHHHHHHHHHHHHhhccchhhhhhhh-cc-----cccc
Confidence 44668899999999999 577778899999999999999999987666542 3455332222111 21 1123
Q ss_pred CCccEEEe-----CCCh-----------hhHHHHHHhhhhCCEEEEEc
Q 019332 221 EGIDIYFE-----NVGG-----------KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 221 ~~~d~vid-----~~g~-----------~~~~~~~~~l~~~G~~v~~g 252 (342)
+.||.|+. .++. ..+..+.++|+|+|+++.-.
T Consensus 125 ~~fD~i~sie~~eH~~~~~~~~~~~~~~~~f~~i~~~LkpgG~~~l~~ 172 (291)
T d1kpia_ 125 EPVDRIVSLGAFEHFADGAGDAGFERYDTFFKKFYNLTPDDGRMLLHT 172 (291)
T ss_dssp CCCSEEEEESCGGGTTCCSSCCSTTHHHHHHHHHHHTSCTTCEEEEEE
T ss_pred cccceEeechhHHhcchhhhhhHHHHHHHHHHHHHHhCCCCCceEEEE
Confidence 46998764 2221 24778889999999988543
|
| >d1jtva_ c.2.1.2 (A:) Human estrogenic 17beta-hydroxysteroid dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Human estrogenic 17beta-hydroxysteroid dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.46 E-value=0.00038 Score=57.72 Aligned_cols=103 Identities=19% Similarity=0.226 Sum_probs=63.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEE---EEeCChhhHHHHH---HHcCC---C---eeEecCCchhHHHHHHHHCCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVV---GSAGSKDKIDLLK---NKFGF---D---EAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi---~~~~s~~~~~~~~---~~~g~---~---~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
.|||+||++|+|.+.+..+...|++|+ .+.++.++.+.+. +++.. . ..+|..+..+..+.+.+...+.
T Consensus 4 VvlITGassGIG~a~A~~la~~Ga~v~~v~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~Dv~~~~~~~~~~~~~~~g~ 83 (285)
T d1jtva_ 4 VVLITGCSSGIGLHLAVRLASDPSQSFKVYATLRDLKTQGRLWEAARALACPPGSLETLQLDVRDSKSVAAARERVTEGR 83 (285)
T ss_dssp EEEESCCSSHHHHHHHHHHHTCTTCCEEEEEEESCGGGTHHHHHHHHHTTCCTTSEEEEECCTTCHHHHHHHHHTCTTSC
T ss_pred EEEEccCCCHHHHHHHHHHHHCCCCeEEEEEecCChhhhHHHHHHHHHHhccCCceEEEeccccchHhhhhhhhhccccc
Confidence 468999999999999988888898644 4455444332222 13322 1 1245555523444444444458
Q ss_pred ccEEEeCCChh--------------------------hHHHHHHhhhh--CCEEEEEceeccc
Q 019332 223 IDIYFENVGGK--------------------------MLDAVLLNMKI--HGRIAVCGMISQY 257 (342)
Q Consensus 223 ~d~vid~~g~~--------------------------~~~~~~~~l~~--~G~~v~~g~~~~~ 257 (342)
+|+++++.|.. ....+++.|+. +|++|.+++..+.
T Consensus 84 idilvnnag~~~~~~~~~~~~e~~~~~~~vN~~g~~~~~~~~lp~m~~~~~G~Iv~isS~~g~ 146 (285)
T d1jtva_ 84 VDVLVCNAGLGLLGPLEALGEDAVASVLDVNVVGTVRMLQAFLPDMKRRGSGRVLVTGSVGGL 146 (285)
T ss_dssp CSEEEECCCCCCCSCGGGSCHHHHHHHHHHHTHHHHHHHHHHHHHHHHHTCEEEEEEEEGGGT
T ss_pred hhhhhhcccccccccccchhHhhhhhhhhcchhHHHHHHHHHHHHHHHcCCCceEEEechhhc
Confidence 99999988831 12334455543 5899999886653
|
| >d1nyta1 c.2.1.7 (A:102-271) Shikimate 5-dehydrogenase AroE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Escherichia coli [TaxId: 562]
Probab=97.46 E-value=0.00046 Score=52.47 Aligned_cols=83 Identities=13% Similarity=0.135 Sum_probs=56.7
Q ss_pred HhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC
Q 019332 142 AGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 142 ~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
.+|.+..-..+|.+|||.|+ ||.+.+++..+...|++|+++.|+.+|.+.+.+.+.....+..-.. + +....
T Consensus 7 ~~l~~~~~~~~~k~vlIlGa-GGaarai~~al~~~g~~i~I~nRt~~ka~~l~~~~~~~~~~~~~~~-~------~~~~~ 78 (170)
T d1nyta1 7 SDLERLSFIRPGLRILLIGA-GGASRGVLLPLLSLDCAVTITNRTVSRAEELAKLFAHTGSIQALSM-D------ELEGH 78 (170)
T ss_dssp HHHHHHTCCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSHHHHHHHHHHTGGGSSEEECCS-G------GGTTC
T ss_pred HHHHHcCCCCCCCEEEEECC-cHHHHHHHHHhcccceEEEeccchHHHHHHHHHHHhhccccccccc-c------ccccc
Confidence 34544444467899999997 9999999998889999999999999988777645443111111111 1 01112
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
.+|++++|...
T Consensus 79 ~~dliIN~Tp~ 89 (170)
T d1nyta1 79 EFDLIINATSS 89 (170)
T ss_dssp CCSEEEECCSC
T ss_pred ccceeeccccc
Confidence 58999999864
|
| >d2o23a1 c.2.1.2 (A:6-253) Type II 3-hydroxyacyl-CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.42 E-value=0.00024 Score=57.65 Aligned_cols=49 Identities=14% Similarity=0.101 Sum_probs=43.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD 200 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~ 200 (342)
+|.++||+||++|+|.+.++.+...|++|+++++++++.+.+.++++..
T Consensus 4 kGKvalITGas~GIG~aia~~la~~G~~V~~~~r~~~~~~~~~~~l~~~ 52 (248)
T d2o23a1 4 KGLVAVITGGASGLGLATAERLVGQGASAVLLDLPNSGGEAQAKKLGNN 52 (248)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEECTTSSHHHHHHHHCTT
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEeCChHHHHHHHHHhCCC
Confidence 6889999999999999999999999999999999998887776577653
|
| >d2fr1a1 c.2.1.2 (A:1657-1915) Erythromycin synthase, eryAI, 1st ketoreductase module {Saccharopolyspora erythraea [TaxId: 1836]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Erythromycin synthase, eryAI, 1st ketoreductase module species: Saccharopolyspora erythraea [TaxId: 1836]
Probab=97.41 E-value=0.00045 Score=56.40 Aligned_cols=83 Identities=16% Similarity=0.207 Sum_probs=54.6
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhh---H----HHHHHHcCCCe---eEecCCchhHHHHHHH
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDK---I----DLLKNKFGFDE---AFNYKEEPDLNEALKR 217 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~---~----~~~~~~~g~~~---v~~~~~~~~~~~~i~~ 217 (342)
.++|+.++||+||++++|++.++.+...|+ +|+.+.++..+ . +.++ +.|..- ..|-.+.....+.+.+
T Consensus 5 ~~~p~gt~lVTGgs~GIG~a~a~~la~~Ga~~vvl~~R~~~~~~~~~~~~~~l~-~~g~~v~~~~~Dv~d~~~~~~~~~~ 83 (259)
T d2fr1a1 5 EWKPTGTVLVTGGTGGVGGQIARWLARRGAPHLLLVSRSGPDADGAGELVAELE-ALGARTTVAACDVTDRESVRELLGG 83 (259)
T ss_dssp CCCCCSEEEEETTTSHHHHHHHHHHHHHTCSEEEEEESSGGGSTTHHHHHHHHH-HTTCEEEEEECCTTCHHHHHHHHHT
T ss_pred ccCCcCEEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCccCHHHHHHHHHHHH-hccccccccccccchHHHHHHhhcc
Confidence 578999999999999999998888888898 68888776422 1 2223 455521 2344554233333333
Q ss_pred HCCC-CccEEEeCCCh
Q 019332 218 YFPE-GIDIYFENVGG 232 (342)
Q Consensus 218 ~~~~-~~d~vid~~g~ 232 (342)
.... .+|.++++.|.
T Consensus 84 i~~~~~i~~vv~~ag~ 99 (259)
T d2fr1a1 84 IGDDVPLSAVFHAAAT 99 (259)
T ss_dssp SCTTSCEEEEEECCCC
T ss_pred cccccccccccccccc
Confidence 3333 68999998883
|
| >d1snya_ c.2.1.2 (A:) Carbonyl reductase sniffer {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Carbonyl reductase sniffer species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.40 E-value=0.00012 Score=59.65 Aligned_cols=78 Identities=12% Similarity=0.213 Sum_probs=51.8
Q ss_pred CEEEEecCCcHHHHHHHHHHH---HcCCEEEEEeCChhhHHHHHH--HcCCC-e--eEecCCchh---HHHHHHHHCC-C
Q 019332 154 ECVFISAASGAVGQLVGQFAK---LLGCYVVGSAGSKDKIDLLKN--KFGFD-E--AFNYKEEPD---LNEALKRYFP-E 221 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~---~~ga~Vi~~~~s~~~~~~~~~--~~g~~-~--v~~~~~~~~---~~~~i~~~~~-~ 221 (342)
.+|||+||++|+|.+.++.+. ..|++|+++++++++.+.+++ +.+.. . .+|..+..+ +.+.+++... +
T Consensus 3 KtilITGas~GIG~a~a~~l~~~a~~g~~V~~~~r~~~~~~~~~~~~~~~~~~~~~~~Dvs~~~~v~~~~~~i~~~~~~~ 82 (248)
T d1snya_ 3 NSILITGCNRGLGLGLVKALLNLPQPPQHLFTTCRNREQAKELEDLAKNHSNIHILEIDLRNFDAYDKLVADIEGVTKDQ 82 (248)
T ss_dssp SEEEESCCSSHHHHHHHHHHHTSSSCCSEEEEEESCTTSCHHHHHHHHHCTTEEEEECCTTCGGGHHHHHHHHHHHHGGG
T ss_pred CEEEEeCCCCHHHHHHHHHHHHHHhCCCEEEEEECCHHHHHHHHHHHhcCCcEEEEEEEeccHHHHHHHHhhhHHHhhcC
Confidence 479999999999998776553 458899999999987765542 11221 1 234444422 3344443333 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
.+|++++++|
T Consensus 83 ~iDiLvnNAg 92 (248)
T d1snya_ 83 GLNVLFNNAG 92 (248)
T ss_dssp CCSEEEECCC
T ss_pred CcceEEeecc
Confidence 7999999887
|
| >d1kpga_ c.66.1.18 (A:) CmaA1 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: CmaA1 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.36 E-value=0.00052 Score=56.75 Aligned_cols=101 Identities=12% Similarity=0.059 Sum_probs=69.2
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCC
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
+.+..++++|++||=+| .|.|..++.+|+..|++|+++..|+++.+.+++. .|....+..... ++ ++ .+
T Consensus 54 ~~~~l~l~~G~~VLDiG--CG~G~~a~~~a~~~g~~v~git~s~~Q~~~a~~~~~~~g~~~~v~~~~~-d~----~~-~~ 125 (285)
T d1kpga_ 54 ALGKLGLQPGMTLLDVG--CGWGATMMRAVEKYDVNVVGLTLSKNQANHVQQLVANSENLRSKRVLLA-GW----EQ-FD 125 (285)
T ss_dssp HHTTTTCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTCCCCSCEEEEES-CG----GG-CC
T ss_pred HHHHcCCCCCCEEEEec--CcchHHHHHHHhcCCcceEEEeccHHHHHHHHHHHHhhhhhhhhHHHHh-hh----hc-cc
Confidence 44567899999999999 5888999999999999999999999988877632 232111111111 11 11 12
Q ss_pred CCccEEEe-----CCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 221 EGIDIYFE-----NVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 221 ~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
+.+|.++- .++. ..+..+.++|+|+|+++.-.
T Consensus 126 ~~fD~i~si~~~eh~~~~~~~~~~~~~~r~LkpgG~~~l~~ 166 (285)
T d1kpga_ 126 EPVDRIVSIGAFEHFGHERYDAFFSLAHRLLPADGVMLLHT 166 (285)
T ss_dssp CCCSEEEEESCGGGTCTTTHHHHHHHHHHHSCTTCEEEEEE
T ss_pred ccccceeeehhhhhcCchhHHHHHHHHHhhcCCCCcEEEEE
Confidence 45787653 3332 25677889999999987533
|
| >d1yb2a1 c.66.1.13 (A:6-255) Hypothetical protein Ta0852 {Thermoplasma acidophilum [TaxId: 2303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein Ta0852 species: Thermoplasma acidophilum [TaxId: 2303]
Probab=97.35 E-value=0.00018 Score=58.30 Aligned_cols=100 Identities=9% Similarity=0.072 Sum_probs=69.4
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHHc---CC-CeeEecCCchhHHHHHHHHC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNKF---GF-DEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~~---g~-~~v~~~~~~~~~~~~i~~~~ 219 (342)
...++++|++||=.|+ |.|..+..+|+..| .+|+++..+++..+.+++.+ +. .. ++.... ++. +..
T Consensus 79 ~~l~i~pG~rVLEiG~--GsG~lt~~la~~v~~~g~V~~vD~~e~~~~~A~~n~~~~~~~~n-v~~~~~-Di~----~~~ 150 (250)
T d1yb2a1 79 MRCGLRPGMDILEVGV--GSGNMSSYILYALNGKGTLTVVERDEDNLKKAMDNLSEFYDIGN-VRTSRS-DIA----DFI 150 (250)
T ss_dssp --CCCCTTCEEEEECC--TTSHHHHHHHHHHTTSSEEEEECSCHHHHHHHHHHHHTTSCCTT-EEEECS-CTT----TCC
T ss_pred HHcCCCCcCEEEEeee--eCcHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHHHHHhcCCCc-eEEEEe-eee----ccc
Confidence 3478999999999984 55788888898765 48999999998888877433 22 22 222222 322 222
Q ss_pred CC-CccEEE-eCCCh-hhHHHHHHhhhhCCEEEEEce
Q 019332 220 PE-GIDIYF-ENVGG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 220 ~~-~~d~vi-d~~g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+ .+|.|+ |.... ..+..+.++|+|+|+++++..
T Consensus 151 ~~~~fD~V~ld~p~p~~~l~~~~~~LKpGG~lv~~~P 187 (250)
T d1yb2a1 151 SDQMYDAVIADIPDPWNHVQKIASMMKPGSVATFYLP 187 (250)
T ss_dssp CSCCEEEEEECCSCGGGSHHHHHHTEEEEEEEEEEES
T ss_pred ccceeeeeeecCCchHHHHHHHHHhcCCCceEEEEeC
Confidence 23 689876 54444 688999999999999988643
|
| >d1ulua_ c.2.1.2 (A:) Enoyl-ACP reductase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Thermus thermophilus [TaxId: 274]
Probab=97.34 E-value=0.00019 Score=58.63 Aligned_cols=80 Identities=16% Similarity=0.206 Sum_probs=53.0
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeE--ecCCchhH---HHHHHHHCCC
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAF--NYKEEPDL---NEALKRYFPE 221 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~--~~~~~~~~---~~~i~~~~~~ 221 (342)
+|.++||+||+| |+|.+.++.+...|++|+++.++++..+.+++ ..+....+ |..+..+. .+.+.+.. |
T Consensus 7 ~gK~alITGas~~~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~D~~~~~~v~~~~~~~~~~~-g 85 (256)
T d1ulua_ 7 SGKKALVMGVTNQRSLGFAIAAKLKEAGAEVALSYQAERLRPEAEKLAEALGGALLFRADVTQDEELDALFAGVKEAF-G 85 (256)
T ss_dssp TTCEEEEESCCCSSSHHHHHHHHHHHTTCEEEEEESSGGGHHHHHHHHHHTTCCEEEECCTTCHHHHHHHHHHHHHHH-S
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCcHHHHHHHHHhhhccCcccccccccCCHHHHHHHHHHHHHhc-C
Confidence 578999999987 89999999888889999999988765444431 22332222 33343122 22233322 3
Q ss_pred CccEEEeCCCh
Q 019332 222 GIDIYFENVGG 232 (342)
Q Consensus 222 ~~d~vid~~g~ 232 (342)
++|++++++|.
T Consensus 86 ~iDilVnnag~ 96 (256)
T d1ulua_ 86 GLDYLVHAIAF 96 (256)
T ss_dssp SEEEEEECCCC
T ss_pred CceEEEecccc
Confidence 69999998873
|
| >d1hdoa_ c.2.1.2 (A:) Biliverdin IX beta reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Biliverdin IX beta reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.30 E-value=0.00026 Score=55.65 Aligned_cols=96 Identities=16% Similarity=0.132 Sum_probs=64.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-EecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-FNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
..+|+|+||+|.+|..++..+...|.+|++++|++++..... ..++..+ .|..+. +.+.+... ++|+||.++|
T Consensus 3 ~kkIlV~GatG~iG~~v~~~Ll~~g~~V~~~~R~~~~~~~~~-~~~~~~~~gD~~d~----~~l~~al~-~~d~vi~~~g 76 (205)
T d1hdoa_ 3 VKKIAIFGATGQTGLTTLAQAVQAGYEVTVLVRDSSRLPSEG-PRPAHVVVGDVLQA----ADVDKTVA-GQDAVIVLLG 76 (205)
T ss_dssp CCEEEEESTTSHHHHHHHHHHHHTTCEEEEEESCGGGSCSSS-CCCSEEEESCTTSH----HHHHHHHT-TCSEEEECCC
T ss_pred CCEEEEECCCCHHHHHHHHHHHHCcCEEEEEEcChhhccccc-ccccccccccccch----hhHHHHhc-CCCEEEEEec
Confidence 468999999999999999988888999999999988754333 3333221 233333 23333332 4899999998
Q ss_pred hh-----------hHHHHHHhhhhCC--EEEEEcee
Q 019332 232 GK-----------MLDAVLLNMKIHG--RIAVCGMI 254 (342)
Q Consensus 232 ~~-----------~~~~~~~~l~~~G--~~v~~g~~ 254 (342)
.. ....+++.++..| +++.++..
T Consensus 77 ~~~~~~~~~~~~~~~~~l~~aa~~~~v~r~i~~ss~ 112 (205)
T d1hdoa_ 77 TRNDLSPTTVMSEGARNIVAAMKAHGVDKVVACTSA 112 (205)
T ss_dssp CTTCCSCCCHHHHHHHHHHHHHHHHTCCEEEEECCG
T ss_pred cCCchhhhhhhHHHHHHHHHHHHhcCCCeEEEEeee
Confidence 52 1234555555543 78877653
|
| >d1r18a_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]
Probab=97.21 E-value=0.00011 Score=58.69 Aligned_cols=98 Identities=12% Similarity=0.130 Sum_probs=61.2
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcC-------CEEEEEeCChhhHHHHHHHc--------CCCeeEecCCchhHH
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLG-------CYVVGSAGSKDKIDLLKNKF--------GFDEAFNYKEEPDLN 212 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~g-------a~Vi~~~~s~~~~~~~~~~~--------g~~~v~~~~~~~~~~ 212 (342)
.+++++++||..| +|.|+.++.+++..| .+|+.+..+++-.+.+++.+ +...+..... +..
T Consensus 76 ~~l~~g~~VLeIG--tGsGY~ta~la~l~g~~g~~~~~~V~~iE~~~~l~~~a~~~l~~~~~~~~~~~nv~~~~~--d~~ 151 (223)
T d1r18a_ 76 DHLKPGARILDVG--SGSGYLTACFYRYIKAKGVDADTRIVGIEHQAELVRRSKANLNTDDRSMLDSGQLLIVEG--DGR 151 (223)
T ss_dssp TTCCTTCEEEEES--CTTSHHHHHHHHHHHHSCCCTTCEEEEEESCHHHHHHHHHHHHHHHHHHHHHTSEEEEES--CGG
T ss_pred hccCCCCeEEEec--CCCCHHHHHHHHHhhhccCCcccEEEEEecCHHHHHHHHHhhhhcchhhcCccEEEEEec--ccc
Confidence 4799999999999 566777777776653 38999998886555554211 2222211111 111
Q ss_pred HHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 213 EALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+...+ .+.||.|+-+.+- ..-...++.|+++|++|..
T Consensus 152 ~~~~~--~~~fD~Iiv~~a~~~~p~~l~~~Lk~gG~lV~p 189 (223)
T d1r18a_ 152 KGYPP--NAPYNAIHVGAAAPDTPTELINQLASGGRLIVP 189 (223)
T ss_dssp GCCGG--GCSEEEEEECSCBSSCCHHHHHTEEEEEEEEEE
T ss_pred ccccc--ccceeeEEEEeechhchHHHHHhcCCCcEEEEE
Confidence 11110 1269988776665 4556788999999999863
|
| >d1i1na_ c.66.1.7 (A:) Protein-L-isoaspartyl O-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Protein-L-isoaspartyl O-methyltransferase domain: Protein-L-isoaspartyl O-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=97.20 E-value=0.00026 Score=56.53 Aligned_cols=97 Identities=16% Similarity=0.169 Sum_probs=65.1
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCChhhHHHHHHHc---CC-----Cee-EecCCchhHHHHHH
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSKDKIDLLKNKF---GF-----DEA-FNYKEEPDLNEALK 216 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~~~~~~~~~~~---g~-----~~v-~~~~~~~~~~~~i~ 216 (342)
.++++|++||-.| +|.|+.++.+|+..| .+|+++..+++-.+.+++.+ +. ..+ +-..+ ......
T Consensus 72 ~~l~~g~~VLdiG--~GsGy~ta~la~l~~~~g~V~~ie~~~~l~~~a~~~l~~~~~~~~~~~~~~~~~gD---~~~~~~ 146 (224)
T d1i1na_ 72 DQLHEGAKALDVG--SGSGILTACFARMVGCTGKVIGIDHIKELVDDSVNNVRKDDPTLLSSGRVQLVVGD---GRMGYA 146 (224)
T ss_dssp TTSCTTCEEEEET--CTTSHHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHHHHHCTHHHHTSSEEEEESC---GGGCCG
T ss_pred hccCCCCeEEEec--CCCCHHHHHHHHHhCCCceEEEEcCCHHHHHHHHHhccccCcccccccceEEEEee---cccccc
Confidence 3789999999999 577899999999876 39999999987666654322 22 111 11111 000000
Q ss_pred HHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 217 RYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 217 ~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+ .+.||.|+-+.+- ......++.|++||++|..
T Consensus 147 ~--~~~fD~I~~~~~~~~ip~~l~~~LkpGG~LV~p 180 (224)
T d1i1na_ 147 E--EAPYDAIHVGAAAPVVPQALIDQLKPGGRLILP 180 (224)
T ss_dssp G--GCCEEEEEECSBBSSCCHHHHHTEEEEEEEEEE
T ss_pred h--hhhhhhhhhhcchhhcCHHHHhhcCCCcEEEEE
Confidence 0 1259999877665 5557789999999999873
|
| >d1e5qa1 c.2.1.3 (A:2-124,A:392-450) Saccharopine reductase {Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Saccharopine reductase species: Rice blast fungus (Magnaporthe grisea) [TaxId: 148305]
Probab=97.19 E-value=0.0026 Score=48.24 Aligned_cols=97 Identities=9% Similarity=0.020 Sum_probs=64.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+.+|||.|| |.+|..+++.+...|.+|+++.++.++.+.+.++++...+ ..... .......... ...|.++.+...
T Consensus 2 ~K~IliiGa-G~~G~~~a~~L~~~g~~V~v~dr~~~~a~~l~~~~~~~~~-~~~~~-~~~~~~~~~i-~~~~~~i~~~~~ 77 (182)
T d1e5qa1 2 TKSVLMLGS-GFVTRPTLDVLTDSGIKVTVACRTLESAKKLSAGVQHSTP-ISLDV-NDDAALDAEV-AKHDLVISLIPY 77 (182)
T ss_dssp CCEEEEECC-STTHHHHHHHHHTTTCEEEEEESCHHHHHHHHTTCTTEEE-EECCT-TCHHHHHHHH-TTSSEEEECSCG
T ss_pred CCEEEEECC-CHHHHHHHHHHHhCCCEEEEEECChHHHHHHHhccccccc-ccccc-cchhhhHhhh-hccceeEeeccc
Confidence 578999997 9999999999888899999999999999888744544222 22221 1122222211 136888887776
Q ss_pred -hhHHHHHHhhhhCCEEEEEce
Q 019332 233 -KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 233 -~~~~~~~~~l~~~G~~v~~g~ 253 (342)
........+++.+..++....
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~ 99 (182)
T d1e5qa1 78 TFHATVIKSAIRQKKHVVTTSY 99 (182)
T ss_dssp GGHHHHHHHHHHHTCEEECSSC
T ss_pred hhhhHHHHHHHhhccceeeccc
Confidence 444455556666667766543
|
| >d2fk8a1 c.66.1.18 (A:22-301) Methoxy mycolic acid synthase 4, Mma4 {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Methoxy mycolic acid synthase 4, Mma4 species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=97.13 E-value=0.00083 Score=55.41 Aligned_cols=101 Identities=15% Similarity=0.144 Sum_probs=67.9
Q ss_pred hhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHC
Q 019332 143 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 143 al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
.+.+..++++|++||=+| .|.|..+..+++..|++|++++.|++..+.+++. .|....+..... ++ ++ .
T Consensus 43 ~~~~~l~l~~g~~VLDiG--CG~G~~a~~~a~~~g~~v~gi~ls~~q~~~a~~~~~~~~l~~~~~~~~~-d~----~~-~ 114 (280)
T d2fk8a1 43 LNLDKLDLKPGMTLLDIG--CGWGTTMRRAVERFDVNVIGLTLSKNQHARCEQVLASIDTNRSRQVLLQ-GW----ED-F 114 (280)
T ss_dssp HHHTTSCCCTTCEEEEES--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHTSCCSSCEEEEES-CG----GG-C
T ss_pred HHHHHcCCCCCCEEEEec--CCchHHHHHHHHhCceeEEEecchHHHHHHHHHHHHhhccccchhhhhh-hh----hh-h
Confidence 344557899999999999 4566677888999999999999999988877632 343211111111 11 11 2
Q ss_pred CCCccEEEe-----CCCh----hhHHHHHHhhhhCCEEEEE
Q 019332 220 PEGIDIYFE-----NVGG----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 220 ~~~~d~vid-----~~g~----~~~~~~~~~l~~~G~~v~~ 251 (342)
.+.+|.|+- .++. ..+..+.++|+|+|+++.-
T Consensus 115 ~~~fD~i~si~~~eh~~~~~~~~~f~~i~~~LkpgG~~~i~ 155 (280)
T d2fk8a1 115 AEPVDRIVSIEAFEHFGHENYDDFFKRCFNIMPADGRMTVQ 155 (280)
T ss_dssp CCCCSEEEEESCGGGTCGGGHHHHHHHHHHHSCTTCEEEEE
T ss_pred ccchhhhhHhhHHHHhhhhhHHHHHHHHHhccCCCceEEEE
Confidence 346887743 3332 2477888999999998763
|
| >d2pd4a1 c.2.1.2 (A:2-275) Enoyl-ACP reductase {Helicobacter pylori [TaxId: 210]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Helicobacter pylori [TaxId: 210]
Probab=97.12 E-value=0.00067 Score=55.78 Aligned_cols=81 Identities=10% Similarity=0.095 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhHHHH---HHHcCCCee--EecCCchhHH---HHHHHHCC
Q 019332 151 KQGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKIDLL---KNKFGFDEA--FNYKEEPDLN---EALKRYFP 220 (342)
Q Consensus 151 ~~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~---~~~~g~~~v--~~~~~~~~~~---~~i~~~~~ 220 (342)
-+|.++||+||+| |||.+.++.+...|++|+.+.++++..+.+ .++.+...+ .+..+..+.. +++.+..
T Consensus 3 L~gK~alITGaag~~GIG~AiA~~la~~Ga~V~i~~r~~~~~~~~~~l~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~- 81 (274)
T d2pd4a1 3 LKGKKGLIVGVANNKSIAYGIAQSCFNQGATLAFTYLNESLEKRVRPIAQELNSPYVYELDVSKEEHFKSLYNSVKKDL- 81 (274)
T ss_dssp TTTCEEEEECCCSTTSHHHHHHHHHHTTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHHHT-
T ss_pred CCCCEEEEECCCCCcHHHHHHHHHHHHCCCEEEEEeCCHHHHHHHHHHHhhCCceeEeeecccchhhHHHHHHHHHHHc-
Confidence 3588999999876 899999999999999999999886433333 312222222 2333331222 3333332
Q ss_pred CCccEEEeCCCh
Q 019332 221 EGIDIYFENVGG 232 (342)
Q Consensus 221 ~~~d~vid~~g~ 232 (342)
+.+|+++++.|.
T Consensus 82 g~id~lV~nag~ 93 (274)
T d2pd4a1 82 GSLDFIVHSVAF 93 (274)
T ss_dssp SCEEEEEECCCC
T ss_pred CCCCeEEeeccc
Confidence 369999998883
|
| >d1nkva_ c.66.1.21 (A:) Hypothetical Protein YjhP {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical Protein YjhP domain: Hypothetical Protein YjhP species: Escherichia coli [TaxId: 562]
Probab=97.11 E-value=0.0003 Score=56.99 Aligned_cols=106 Identities=17% Similarity=0.135 Sum_probs=71.1
Q ss_pred HHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHH
Q 019332 141 YAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKR 217 (342)
Q Consensus 141 ~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~ 217 (342)
+..|....++++|++||=+| .|.|..+..+++..|++|++++.|++..+.+++ +.|....++.... +..+ +
T Consensus 22 ~~~l~~~~~l~pg~~VLDiG--CG~G~~~~~la~~~~~~v~GvD~s~~~~~~ar~~~~~~gl~~~v~~~~~-d~~~-~-- 95 (245)
T d1nkva_ 22 YATLGRVLRMKPGTRILDLG--SGSGEMLCTWARDHGITGTGIDMSSLFTAQAKRRAEELGVSERVHFIHN-DAAG-Y-- 95 (245)
T ss_dssp HHHHHHHTCCCTTCEEEEET--CTTCHHHHHHHHHTCCEEEEEESCHHHHHHHHHHHHHTTCTTTEEEEES-CCTT-C--
T ss_pred HHHHHHHcCCCCCCEEEEEc--CCCCHHHHHHHHhcCCEEEEEecccchhhHHHHHHHHhhccccchhhhh-HHhh-c--
Confidence 44566778999999999998 466777888888889999999999987766652 3454321222111 2111 1
Q ss_pred HCCCCccEEEeCCC-------hhhHHHHHHhhhhCCEEEEEc
Q 019332 218 YFPEGIDIYFENVG-------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 218 ~~~~~~d~vid~~g-------~~~~~~~~~~l~~~G~~v~~g 252 (342)
...+.+|.|+-... ...+..+.+.|+|+|+++...
T Consensus 96 ~~~~~fD~v~~~~~~~~~~d~~~~l~~~~r~LkPGG~l~i~~ 137 (245)
T d1nkva_ 96 VANEKCDVAACVGATWIAGGFAGAEELLAQSLKPGGIMLIGE 137 (245)
T ss_dssp CCSSCEEEEEEESCGGGTSSSHHHHHHHTTSEEEEEEEEEEE
T ss_pred cccCceeEEEEEehhhccCCHHHHHHHHHHHcCcCcEEEEEe
Confidence 12237998874322 136777888999999988654
|
| >d1vi2a1 c.2.1.7 (A:107-288) Putative shikimate dehydrogenase YdiB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Putative shikimate dehydrogenase YdiB species: Escherichia coli [TaxId: 562]
Probab=96.99 E-value=0.0039 Score=47.62 Aligned_cols=96 Identities=15% Similarity=0.142 Sum_probs=59.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHH---HHcC----C-CeeEecCCchhHHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLK---NKFG----F-DEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~---~~~g----~-~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
-.+.+|+|.|+ ||.|.+++..+...|+ +++++.|++++.+.+. ++++ . ..+.+..+...+.+.+.
T Consensus 16 l~~k~vlIlGa-GGaarai~~al~~~g~~~i~i~nR~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 89 (182)
T d1vi2a1 16 IKGKTMVLLGA-GGASTAIGAQGAIEGLKEIKLFNRRDEFFDKALAFAQRVNENTDCVVTVTDLADQQAFAEALA----- 89 (182)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCSEEEEEECSSTTHHHHHHHHHHHHHHSSCEEEEEETTCHHHHHHHHH-----
T ss_pred cCCCEEEEECC-cHHHHHHHHHHhhcCCceEeeeccchHHHHHHHHHHHHHHhhcCcceEeeecccccchhhhhc-----
Confidence 36689999997 9999999888888898 8888888876554332 1222 2 12344444313333332
Q ss_pred CccEEEeCCChhh-------HHHHHHhhhhCCEEEEEc
Q 019332 222 GIDIYFENVGGKM-------LDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 222 ~~d~vid~~g~~~-------~~~~~~~l~~~G~~v~~g 252 (342)
.+|+++||..-.. +..-...++++..++.+-
T Consensus 90 ~~diiIN~Tp~G~~~~~~~~~~~~~~~~~~~~~v~Di~ 127 (182)
T d1vi2a1 90 SADILTNGTKVGMKPLENESLVNDISLLHPGLLVTECV 127 (182)
T ss_dssp TCSEEEECSSTTSTTSCSCCSCCCGGGSCTTCEEEECC
T ss_pred ccceeccccCCccccccchhhhhHHHhhhcchhhHHhh
Confidence 3899999976311 111124566677777664
|
| >d1mxha_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Trypanosoma cruzi [TaxId: 5693]
Probab=96.98 E-value=0.0023 Score=52.07 Aligned_cols=35 Identities=14% Similarity=0.156 Sum_probs=31.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
+.||+||++|+|.+.++.+...|++|+.+.++.++
T Consensus 3 vAlVTGas~GIG~aia~~la~~G~~Vvi~~r~~~~ 37 (266)
T d1mxha_ 3 AAVITGGARRIGHSIAVRLHQQGFRVVVHYRHSEG 37 (266)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCchH
Confidence 56999999999999999999999999999988654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=96.97 E-value=0.0075 Score=43.23 Aligned_cols=76 Identities=18% Similarity=0.108 Sum_probs=56.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|+|.|+ |.+|...++.+...|.+|++++.++++.+.+.++++.. ++..+. .-.+.+++..-..+|.++-+...+.
T Consensus 2 ~IvI~G~-G~~G~~la~~L~~~g~~v~vid~d~~~~~~~~~~~~~~-vi~Gd~--~~~~~l~~~~i~~a~~vv~~t~~d~ 77 (132)
T d1lssa_ 2 YIIIAGI-GRVGYTLAKSLSEKGHDIVLIDIDKDICKKASAEIDAL-VINGDC--TKIKTLEDAGIEDADMYIAVTGKEE 77 (132)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEEESCHHHHHHHHHHCSSE-EEESCT--TSHHHHHHTTTTTCSEEEECCSCHH
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCCcceecCChhhhhhhhhhhhhh-hccCcc--cchhhhhhcChhhhhhhcccCCcHH
Confidence 5899997 99999999999999999999999999988887456653 443222 2233444443346899998888753
|
| >d1oaaa_ c.2.1.2 (A:) Sepiapterin reductase {Mouse (Mus musculus) [TaxId: 10090]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sepiapterin reductase species: Mouse (Mus musculus) [TaxId: 10090]
Probab=96.94 E-value=0.0012 Score=53.77 Aligned_cols=80 Identities=20% Similarity=0.234 Sum_probs=51.9
Q ss_pred CCCEEEEecCCcHHHHHHHH-HHHH--cCCEEEEEeCChhhHHHHHHHcC---C-Cee----EecCCchh---HHHHHHH
Q 019332 152 QGECVFISAASGAVGQLVGQ-FAKL--LGCYVVGSAGSKDKIDLLKNKFG---F-DEA----FNYKEEPD---LNEALKR 217 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~-la~~--~ga~Vi~~~~s~~~~~~~~~~~g---~-~~v----~~~~~~~~---~~~~i~~ 217 (342)
.|..++|+||++|+|.+.++ ||+. .|++|+.+++++++++.+.+++. . .++ .|-.+..+ +.+.+.+
T Consensus 5 ~gKvalITGas~GIG~aiA~~lA~~~~~G~~Vv~~~r~~~~l~~~~~~l~~~~~~~~~~~~~~Dvs~~~~v~~l~~~~~~ 84 (259)
T d1oaaa_ 5 GCAVCVLTGASRGFGRALAPQLARLLSPGSVMLVSARSESMLRQLKEELGAQQPDLKVVLAAADLGTEAGVQRLLSAVRE 84 (259)
T ss_dssp BSEEEEESSCSSHHHHHHHHHHHTTBCTTCEEEEEESCHHHHHHHHHHHHHHCTTSEEEEEECCTTSHHHHHHHHHHHHH
T ss_pred CCCEEEEeCCCCHHHHHHHHHHHhcccCCCEEEEEECCHHHHHHHHHHHHhhcCCceEEEEEccCCCHHHHHHHHHHHHH
Confidence 46788999999999998665 5553 68999999999998877654432 1 122 34444412 2333333
Q ss_pred HC--CC-CccEEEeCCC
Q 019332 218 YF--PE-GIDIYFENVG 231 (342)
Q Consensus 218 ~~--~~-~~d~vid~~g 231 (342)
.. .+ ..|++++++|
T Consensus 85 ~~~~~~~~~~~lvnnag 101 (259)
T d1oaaa_ 85 LPRPEGLQRLLLINNAA 101 (259)
T ss_dssp SCCCTTCCEEEEEECCC
T ss_pred hhhhccCceEEEEeccc
Confidence 32 22 5788888766
|
| >d2h7ma1 c.2.1.2 (A:2-269) Enoyl-ACP reductase {Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Mycobacterium tuberculosis, TB, gene InhA [TaxId: 1773]
Probab=96.90 E-value=0.0023 Score=52.13 Aligned_cols=82 Identities=11% Similarity=0.217 Sum_probs=55.4
Q ss_pred CCCCCEEEEecCC--cHHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHHHcCCCe---eEecCCc---hhHHHHHHHHCC
Q 019332 150 PKQGECVFISAAS--GAVGQLVGQFAKLLGCYVVGSAGSKDKI-DLLKNKFGFDE---AFNYKEE---PDLNEALKRYFP 220 (342)
Q Consensus 150 ~~~~~~vlI~ga~--g~vG~~ai~la~~~ga~Vi~~~~s~~~~-~~~~~~~g~~~---v~~~~~~---~~~~~~i~~~~~ 220 (342)
+-.|.++||+||+ .|+|.+.++-+...|++|+.+.+++++. +.+.++++... ..|..+. .++.+.+.+...
T Consensus 3 ~l~gK~~lItGaag~~GIG~aiA~~la~~Ga~Vil~~~~~~~~~~~~~~~~~~~~~~~~~dv~~~~~~~~~~~~v~~~~~ 82 (268)
T d2h7ma1 3 LLDGKRILVSGIITDSSIAFHIARVAQEQGAQLVLTGFDRLRLIQRITDRLPAKAPLLELDVQNEEHLASLAGRVTEAIG 82 (268)
T ss_dssp TTTTCEEEECCCSSTTCHHHHHHHHHHHTTCEEEEEECSCHHHHHHHHTTSSSCCCEEECCTTCHHHHHHHHHHHHHHHC
T ss_pred CCCCCEEEEECCCCCCHHHHHHHHHHHHcCCEEEEEeCChHHHHHHHHHHcCCceeeEeeecccccccccccchhhhccc
Confidence 4567899999964 4799999998999999999999887765 33443555421 2233332 134444544333
Q ss_pred --CCccEEEeCCC
Q 019332 221 --EGIDIYFENVG 231 (342)
Q Consensus 221 --~~~d~vid~~g 231 (342)
+.+|++++++|
T Consensus 83 ~~~~ld~~i~~ag 95 (268)
T d2h7ma1 83 AGNKLDGVVHSIG 95 (268)
T ss_dssp TTCCEEEEEECCC
T ss_pred cCCCcceeeeccc
Confidence 26899999988
|
| >d1pjqa1 c.2.1.11 (A:1-113) Siroheme synthase CysG, domain 1 {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Siroheme synthase CysG, domain 1 species: Salmonella typhimurium [TaxId: 90371]
Probab=96.88 E-value=0.006 Score=42.50 Aligned_cols=89 Identities=9% Similarity=-0.031 Sum_probs=61.0
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCCeeEe--cCCchhHHHHHHHHCCCCccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFDEAFN--YKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~~v~~--~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
.|.+|||.|+ |.+|..-++.+...|++|++++..... ..++. +-+. .... +.+. ++ .++++++
T Consensus 11 ~~k~vlVvG~-G~va~~ka~~ll~~ga~v~v~~~~~~~~~~~~~~-~~~i-~~~~~~~~~~-dl---------~~~~lv~ 77 (113)
T d1pjqa1 11 RDRDCLIVGG-GDVAERKARLLLEAGARLTVNALTFIPQFTVWAN-EGML-TLVEGPFDET-LL---------DSCWLAI 77 (113)
T ss_dssp BTCEEEEECC-SHHHHHHHHHHHHTTBEEEEEESSCCHHHHHHHT-TTSC-EEEESSCCGG-GG---------TTCSEEE
T ss_pred CCCEEEEECC-CHHHHHHHHHHHHCCCeEEEEeccCChHHHHHHh-cCCc-eeeccCCCHH-Hh---------CCCcEEe
Confidence 4679999997 999999999999999999888764432 12222 2122 2221 1111 11 2589999
Q ss_pred eCCChhhH-HHHHHhhhhCCEEEEEce
Q 019332 228 ENVGGKML-DAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 228 d~~g~~~~-~~~~~~l~~~G~~v~~g~ 253 (342)
-+.+...+ .......++.|.+|++..
T Consensus 78 ~at~d~~~n~~i~~~a~~~~ilVNv~D 104 (113)
T d1pjqa1 78 AATDDDTVNQRVSDAAESRRIFCNVVD 104 (113)
T ss_dssp ECCSCHHHHHHHHHHHHHTTCEEEETT
T ss_pred ecCCCHHHHHHHHHHHHHcCCEEEeCC
Confidence 99988544 577788889999998754
|
| >d1susa1 c.66.1.1 (A:21-247) Caffeoyl-CoA O-methyltransferase {Alfalfa (Medicago sativa) [TaxId: 3879]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Caffeoyl-CoA O-methyltransferase species: Alfalfa (Medicago sativa) [TaxId: 3879]
Probab=96.87 E-value=0.0027 Score=50.38 Aligned_cols=103 Identities=14% Similarity=0.094 Sum_probs=71.8
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHH---
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRY--- 218 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~--- 218 (342)
..+.....+||-+| +++|+.++.+|+.+ +.+|+.+..+++..+.+++ +.|....+..... +..+.+.++
T Consensus 54 L~~~~~~k~iLEiG--T~~GyStl~la~al~~~g~v~tie~~~~~~~~A~~~~~~~g~~~~i~~~~g-~a~~~L~~l~~~ 130 (227)
T d1susa1 54 LLKLINAKNTMEIG--VYTGYSLLATALAIPEDGKILAMDINKENYELGLPVIKKAGVDHKIDFREG-PALPVLDEMIKD 130 (227)
T ss_dssp HHHHHTCCEEEEEC--CGGGHHHHHHHHHSCTTCEEEEEESCCHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHC
T ss_pred HHHhcCCCcEEEec--chhhhhHHHHHhhCCCCcEEEEEeccchhHHHHHHHHHHhccccceeeeeh-HHHHHHHHHHhc
Confidence 34556678999999 78899999999877 4699999999987776663 3466433333333 444444443
Q ss_pred --CCCCccEEE-eCCCh---hhHHHHHHhhhhCCEEEEEc
Q 019332 219 --FPEGIDIYF-ENVGG---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 219 --~~~~~d~vi-d~~g~---~~~~~~~~~l~~~G~~v~~g 252 (342)
..+.||+|| |+--. ..++.+++.|++||.++.=.
T Consensus 131 ~~~~~~fD~iFiDa~k~~y~~~~e~~~~ll~~gGiii~DN 170 (227)
T d1susa1 131 EKNHGSYDFIFVDADKDNYLNYHKRLIDLVKVGGVIGYDN 170 (227)
T ss_dssp GGGTTCBSEEEECSCSTTHHHHHHHHHHHBCTTCCEEEET
T ss_pred cccCCceeEEEeccchhhhHHHHHHHHhhcCCCcEEEEcc
Confidence 233699875 54443 46788999999999988643
|
| >d1bg6a2 c.2.1.6 (A:4-187) N-(1-D-carboxylethyl)-L-norvaline dehydrogenase {Arthrobacter, strain 1c [TaxId: 1663]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: N-(1-D-carboxylethyl)-L-norvaline dehydrogenase species: Arthrobacter, strain 1c [TaxId: 1663]
Probab=96.84 E-value=0.0058 Score=46.45 Aligned_cols=84 Identities=17% Similarity=0.146 Sum_probs=59.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-------EecCC--chhHHHHHHHHCCCCcc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-------FNYKE--EPDLNEALKRYFPEGID 224 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-------~~~~~--~~~~~~~i~~~~~~~~d 224 (342)
.++.|.|+ |.+|.+.+..+...|.+|++.++++++.+.++ +.+.... ..... ..+..+.++ .+|
T Consensus 2 k~iaIiGa-G~~G~~~A~~l~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~e~~~-----~aD 74 (184)
T d1bg6a2 2 KTYAVLGL-GNGGHAFAAYLALKGQSVLAWDIDAQRIKEIQ-DRGAIIAEGPGLAGTAHPDLLTSDIGLAVK-----DAD 74 (184)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HHTSEEEESSSCCEEECCSEEESCHHHHHT-----TCS
T ss_pred CEEEEECc-cHHHHHHHHHHHHCCCEEEEEECCHHHHHHHH-HcCCCchhhhhhhhhhhhhhhhhhhHhHhc-----CCC
Confidence 58999997 99999999999999999999999999988887 5543110 00000 002333333 389
Q ss_pred EEEeCCChhhHHHHHHhhhh
Q 019332 225 IYFENVGGKMLDAVLLNMKI 244 (342)
Q Consensus 225 ~vid~~g~~~~~~~~~~l~~ 244 (342)
++|-|+........++.+++
T Consensus 75 ~iii~v~~~~~~~~~~~i~~ 94 (184)
T d1bg6a2 75 VILIVVPAIHHASIAANIAS 94 (184)
T ss_dssp EEEECSCGGGHHHHHHHHGG
T ss_pred EEEEEEchhHHHHHHHHhhh
Confidence 99999998666666655554
|
| >d1qsga_ c.2.1.2 (A:) Enoyl-ACP reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Escherichia coli [TaxId: 562]
Probab=96.84 E-value=0.0016 Score=52.94 Aligned_cols=81 Identities=10% Similarity=0.196 Sum_probs=52.6
Q ss_pred CCCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeE--ecCCchhHHHHHHHHCC--C
Q 019332 151 KQGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAF--NYKEEPDLNEALKRYFP--E 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~--~~~~~~~~~~~i~~~~~--~ 221 (342)
-+|.++||+||+| |+|.+.+..+...|++|+.+.++++..+.+.+ ..+....+ +..+..+..+...+... +
T Consensus 3 L~gK~~lITGass~~GIG~aiA~~l~~~G~~V~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (258)
T d1qsga_ 3 LSGKRILVTGVASKLSIAYGIAQAMHREGAELAFTYQNDKLKGRVEEFAAQLGSDIVLQCDVAEDASIDTMFAELGKVWP 82 (258)
T ss_dssp TTTCEEEECCCCSTTSHHHHHHHHHHHTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEECCTTCHHHHHHHHHHHHTTCS
T ss_pred CCCCEEEEECCCCchhHHHHHHHHHHHcCCEEEEEeCCHHHHHHHHHHHhhcCCcceeecccchHHHHHHHHHHhhhccc
Confidence 4688999999988 79999999999999999999998765554432 23333222 22222122233333222 3
Q ss_pred CccEEEeCCC
Q 019332 222 GIDIYFENVG 231 (342)
Q Consensus 222 ~~d~vid~~g 231 (342)
..|+.+++++
T Consensus 83 ~~d~~v~~a~ 92 (258)
T d1qsga_ 83 KFDGFVHSIG 92 (258)
T ss_dssp SEEEEEECCC
T ss_pred ccceEEEeec
Confidence 6899998765
|
| >d2b25a1 c.66.1.13 (A:6-329) Hypothetical protein FLJ20628 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Hypothetical protein FLJ20628 species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.82 E-value=0.00064 Score=57.16 Aligned_cols=104 Identities=19% Similarity=0.229 Sum_probs=66.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcC--------------CCeeEecCCch
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFG--------------FDEAFNYKEEP 209 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g--------------~~~v~~~~~~~ 209 (342)
...++++|++||=.| .|.|.+++.+|+..|. +|+.+..+++..+.+++.+. .+. ++....
T Consensus 92 ~~l~i~pG~rVLE~G--tGsG~lt~~LAr~vg~~G~V~t~E~~~~~~~~A~~n~~~~~~~~~~~~~~~~~~n-v~~~~~- 167 (324)
T d2b25a1 92 SMMDINPGDTVLEAG--SGSGGMSLFLSKAVGSQGRVISFEVRKDHHDLAKKNYKHWRDSWKLSHVEEWPDN-VDFIHK- 167 (324)
T ss_dssp HHHTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTCEEEEEESSHHHHHHHHHHHHHHHHHHTTTCSSCCCCC-EEEEES-
T ss_pred HHhCCCCCCEEEEec--ccccHHHHHHHHHhCCCcEEEEecCCHHHHHHHHHHHHHhhhhhhhhhhhccccc-eeEEec-
Confidence 457899999999888 4669999999998875 89999999988877764321 011 111111
Q ss_pred hHHHHHHHHCCCCccEEE-eCCCh-hhHHHHHHhhhhCCEEEEEce
Q 019332 210 DLNEALKRYFPEGIDIYF-ENVGG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 210 ~~~~~i~~~~~~~~d~vi-d~~g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
++.+.......+.+|.|| |-... ..+..+.++|+|||+++.+..
T Consensus 168 di~~~~~~~~~~~fD~V~LD~p~P~~~l~~~~~~LKpGG~lv~~~P 213 (324)
T d2b25a1 168 DISGATEDIKSLTFDAVALDMLNPHVTLPVFYPHLKHGGVCAVYVV 213 (324)
T ss_dssp CTTCCC-------EEEEEECSSSTTTTHHHHGGGEEEEEEEEEEES
T ss_pred chhhcccccCCCCcceEeecCcCHHHHHHHHHHhccCCCEEEEEeC
Confidence 111111111112578665 44333 578999999999999998753
|
| >d1l3ia_ c.66.1.22 (A:) Precorrin-6Y methyltransferase (CbiT) {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Precorrin-6Y methyltransferase (CbiT) domain: Precorrin-6Y methyltransferase (CbiT) species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=96.77 E-value=0.0023 Score=49.11 Aligned_cols=101 Identities=21% Similarity=0.238 Sum_probs=65.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
...++++|++||=.|. |.|..++.+|+. +.+|++++.+++..+.+++ ++|...-+..... +..+.... .+.
T Consensus 27 ~~l~~~~g~~VLDiGc--GsG~~s~~lA~~-~~~V~avD~~~~~l~~a~~n~~~~gl~~~v~~~~g-da~~~~~~--~~~ 100 (186)
T d1l3ia_ 27 CLAEPGKNDVAVDVGC--GTGGVTLELAGR-VRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEG-DAPEALCK--IPD 100 (186)
T ss_dssp HHHCCCTTCEEEEESC--TTSHHHHHHHTT-SSEEEEEESCHHHHHHHHHHHHHTTCCTTEEEEES-CHHHHHTT--SCC
T ss_pred HhcCCCCCCEEEEEEC--CeEccccccccc-ceEEEEecCCHHHHHHHHHHHHHcCCCcceEEEEC-chhhcccc--cCC
Confidence 3468899999998884 556666777764 5699999999987777764 3555211222122 33222211 126
Q ss_pred ccEEEeCCCh----hhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENVGG----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~g~----~~~~~~~~~l~~~G~~v~~g 252 (342)
+|.++-..+. +.+..+.+.|+++|+++...
T Consensus 101 ~D~v~~~~~~~~~~~~~~~~~~~LkpgG~lvi~~ 134 (186)
T d1l3ia_ 101 IDIAVVGGSGGELQEILRIIKDKLKPGGRIIVTA 134 (186)
T ss_dssp EEEEEESCCTTCHHHHHHHHHHTEEEEEEEEEEE
T ss_pred cCEEEEeCccccchHHHHHHHHHhCcCCEEEEEe
Confidence 8988755442 35677888999999988653
|
| >d1pjza_ c.66.1.36 (A:) Thiopurine S-methyltransferase {Pseudomonas syringae [TaxId: 317]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Pseudomonas syringae [TaxId: 317]
Probab=96.72 E-value=0.0034 Score=48.27 Aligned_cols=97 Identities=11% Similarity=0.027 Sum_probs=64.7
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee-----------------EecCCchh
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA-----------------FNYKEEPD 210 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v-----------------~~~~~~~~ 210 (342)
..+.+|.+||..| .|.|..++.+|+. |++|++++.|++-.+.+++..+.... +..+-. +
T Consensus 16 l~~~~~~rvLd~G--CG~G~~a~~la~~-G~~V~gvD~S~~~i~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~-~ 91 (201)
T d1pjza_ 16 LNVVPGARVLVPL--CGKSQDMSWLSGQ-GYHVVGAELSEAAVERYFTERGEQPHITSQGDFKVYAAPGIEIWCGDFF-A 91 (201)
T ss_dssp HCCCTTCEEEETT--TCCSHHHHHHHHH-CCEEEEEEECHHHHHHHHHHHCSCSEEEEETTEEEEECSSSEEEEECCS-S
T ss_pred cCCCCCCEEEEec--CcCCHHHHHHHHc-CCceEeecccHHHHHHHHHHhccccchhhhhhhhhccccccceeccccc-c
Confidence 4688999999999 4678889999875 99999999999988888854432110 000000 1
Q ss_pred HHHHHHHHCCCCccEEEeCCCh---------hhHHHHHHhhhhCCEEEEEc
Q 019332 211 LNEALKRYFPEGIDIYFENVGG---------KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 211 ~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g 252 (342)
+..... +.+|.|++...- ..+..+.++|+++|+++...
T Consensus 92 l~~~~~----~~~D~i~~~~~l~~l~~~~~~~~~~~i~~~LkpgG~l~l~~ 138 (201)
T d1pjza_ 92 LTARDI----GHCAAFYDRAAMIALPADMRERYVQHLEALMPQACSGLLIT 138 (201)
T ss_dssp STHHHH----HSEEEEEEESCGGGSCHHHHHHHHHHHHHHSCSEEEEEEEE
T ss_pred cccccc----cceeEEEEEeeeEecchhhhHHHHHHHHHhcCCCcEEEEEE
Confidence 111111 147888874441 24567888999999976543
|
| >d1r0ka2 c.2.1.3 (A:3-126,A:265-290) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Zymomonas mobilis [TaxId: 542]
Probab=96.71 E-value=0.016 Score=42.38 Aligned_cols=96 Identities=17% Similarity=0.168 Sum_probs=63.2
Q ss_pred CEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCCh--hhHHHHHHHcCCCeeEecCCchhHHHHHHH------------
Q 019332 154 ECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSK--DKIDLLKNKFGFDEAFNYKEEPDLNEALKR------------ 217 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~--~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~------------ 217 (342)
.+|.|.|+||.||..++++.+.. .++|++.+-.. +++....++|....++-.++. ..+.+.+
T Consensus 3 K~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~lsa~~N~~~L~~q~~ef~Pk~v~i~d~~--~~~~l~~~~~~~~~~v~~g 80 (150)
T d1r0ka2 3 RTVTVLGATGSIGHSTLDLIERNLDRYQVIALTANRNVKDLADAAKRTNAKRAVIADPS--LYNDLKEALAGSSVEAAAG 80 (150)
T ss_dssp EEEEEETTTSHHHHHHHHHHHHTGGGEEEEEEEESSCHHHHHHHHHHTTCSEEEESCGG--GHHHHHHHTTTCSSEEEES
T ss_pred cEEEEECCCcHHHHHHHHHHHcCCCCcEEEEEEeCCCHHHHHHHHHhhccccceeccHH--HHHHHHHHhhhcccccccC
Confidence 68999999999999999999876 46877665433 333322227777665433322 1222222
Q ss_pred ------HCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 218 ------YFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 218 ------~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
.....+|+++.+..+ ..+...+.+++.+-++...
T Consensus 81 ~~~l~~~~~~~~D~vv~Ai~G~~GL~~tl~ai~~gk~iaLA 121 (150)
T d1r0ka2 81 ADALVEAAMMGADWTMAAIIGCAGLKATLAAIRKGKTVALA 121 (150)
T ss_dssp HHHHHHHHTSCCSEEEECCCSGGGHHHHHHHHHTTSEEEEC
T ss_pred ccchheecccccceeeeecCchhHHHHHHHHHhcCCEEEEe
Confidence 111247999998766 8888888898888776543
|
| >d2o57a1 c.66.1.18 (A:16-297) Putative sarcosine dimethylglycine methyltransferase {Red algae (Galdieria sulphuraria) [TaxId: 130081]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Mycolic acid cyclopropane synthase domain: Putative sarcosine dimethylglycine methyltransferase species: Red algae (Galdieria sulphuraria) [TaxId: 130081]
Probab=96.69 E-value=0.0015 Score=53.86 Aligned_cols=108 Identities=8% Similarity=0.047 Sum_probs=70.2
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
|.....+.++.+||=.| .|.|..+..+++..|++|++++.++...+.+++ ..|...-+..... ++. .+ ....
T Consensus 59 l~~~~~l~~~~~vLDiG--cG~G~~~~~la~~~~~~v~gvD~s~~~i~~a~~~~~~~gl~~~v~~~~~-d~~-~l-~~~~ 133 (282)
T d2o57a1 59 LAMTGVLQRQAKGLDLG--AGYGGAARFLVRKFGVSIDCLNIAPVQNKRNEEYNNQAGLADNITVKYG-SFL-EI-PCED 133 (282)
T ss_dssp HHHTTCCCTTCEEEEET--CTTSHHHHHHHHHHCCEEEEEESCHHHHHHHHHHHHHHTCTTTEEEEEC-CTT-SC-SSCT
T ss_pred HHHhcCCCCCCEEEEeC--CCCcHHHhhhhccCCcEEEEEeccchhhhhhhccccccccccccccccc-ccc-cc-cccc
Confidence 33456789999999998 457788888998889999999999987666653 2344211111111 110 01 1112
Q ss_pred CCccEEEeCCC-----h--hhHHHHHHhhhhCCEEEEEceecc
Q 019332 221 EGIDIYFENVG-----G--KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 221 ~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+.+|+|+-... . ..+..+.++|+|+|+++.......
T Consensus 134 ~sfD~V~~~~~l~h~~d~~~~l~~~~~~LkpgG~l~~~~~~~~ 176 (282)
T d2o57a1 134 NSYDFIWSQDAFLHSPDKLKVFQECARVLKPRGVMAITDPMKE 176 (282)
T ss_dssp TCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEEEEC
T ss_pred cccchhhccchhhhccCHHHHHHHHHHhcCCCcEEEEEEeecC
Confidence 36999875322 1 357888999999999987765433
|
| >d1p77a1 c.2.1.7 (A:102-272) Shikimate 5-dehydrogenase AroE {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Haemophilus influenzae [TaxId: 727]
Probab=96.69 E-value=0.0033 Score=47.55 Aligned_cols=99 Identities=12% Similarity=0.006 Sum_probs=62.7
Q ss_pred hhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC---eeEecCCchhHHHHHHHHC
Q 019332 143 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD---EAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 143 al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~---~v~~~~~~~~~~~~i~~~~ 219 (342)
+|.+.....++.+|+|.|+ ||.+.+++..+...+.+|+++.|+.++.+.+.+.++.. ..+.... ..
T Consensus 8 ~l~~~~~~~~~k~vlIlGa-GGaarai~~aL~~~~~~i~I~nR~~~~a~~l~~~~~~~~~~~~~~~~~----------~~ 76 (171)
T d1p77a1 8 DLQRLNWLRPNQHVLILGA-GGATKGVLLPLLQAQQNIVLANRTFSKTKELAERFQPYGNIQAVSMDS----------IP 76 (171)
T ss_dssp HHHHTTCCCTTCEEEEECC-SHHHHTTHHHHHHTTCEEEEEESSHHHHHHHHHHHGGGSCEEEEEGGG----------CC
T ss_pred HHHHcCCCCCCCEEEEECC-cHHHHHHHHHHcccCceeeeccchHHHHHHHHHHHhhccccchhhhcc----------cc
Confidence 3433333457889999997 99999988877776779999999999888776555431 1222111 11
Q ss_pred CCCccEEEeCCChhhHH----HHHHhhhhCCEEEEEc
Q 019332 220 PEGIDIYFENVGGKMLD----AVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 ~~~~d~vid~~g~~~~~----~~~~~l~~~G~~v~~g 252 (342)
...+|++++|+...... ...+.++++..++.+-
T Consensus 77 ~~~~diiIN~tp~g~~~~~~~~~~~~~~~~~~~~D~v 113 (171)
T d1p77a1 77 LQTYDLVINATSAGLSGGTASVDAEILKLGSAFYDMQ 113 (171)
T ss_dssp CSCCSEEEECCCC-------CCCHHHHHHCSCEEESC
T ss_pred ccccceeeecccccccccccchhhhhhcccceeeeee
Confidence 13589999998752211 1223456666666553
|
| >d1zx0a1 c.66.1.16 (A:8-236) Guanidinoacetate methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Guanidinoacetate methyltransferase domain: Guanidinoacetate methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.67 E-value=0.00088 Score=53.53 Aligned_cols=100 Identities=7% Similarity=-0.074 Sum_probs=65.4
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC-CeeEecCCchhHHHHHHHHCCCCccEE-E
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF-DEAFNYKEEPDLNEALKRYFPEGIDIY-F 227 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~i~~~~~~~~d~v-i 227 (342)
..+|.+||-+| .|.|..+..+++..+.+|+++..++.-.+.+++.... ...+..... +..........+.+|.+ +
T Consensus 51 ~~~g~~VLdIG--cG~G~~a~~~a~~~~~~v~~id~s~~~~~~a~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~fD~i~f 127 (229)
T d1zx0a1 51 SSKGGRVLEVG--FGMAIAASKVQEAPIDEHWIIECNDGVFQRLRDWAPRQTHKVIPLKG-LWEDVAPTLPDGHFDGILY 127 (229)
T ss_dssp TTTCEEEEEEC--CTTSHHHHHHHTSCEEEEEEEECCHHHHHHHHHHGGGCSSEEEEEES-CHHHHGGGSCTTCEEEEEE
T ss_pred ccCCCeEEEee--ccchHHHHHHHHcCCCeEEEeCCCHHHHHHHHHHhhhcccccccccc-cccccccccccccccceee
Confidence 36788999999 5778888899887777999999999888888743321 111111111 23333333334478887 5
Q ss_pred eCCCh-----------hhHHHHHHhhhhCCEEEEEc
Q 019332 228 ENVGG-----------KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 228 d~~g~-----------~~~~~~~~~l~~~G~~v~~g 252 (342)
|.... ..+..+.+.|+|||+++...
T Consensus 128 D~~~~~~~~~~~~~~~~~~~~~~r~LkpGG~~~~~~ 163 (229)
T d1zx0a1 128 DTYPLSEETWHTHQFNFIKNHAFRLLKPGGVLTYCN 163 (229)
T ss_dssp CCCCCBGGGTTTHHHHHHHHTHHHHEEEEEEEEECC
T ss_pred cccccccccccccCHHHHHHHHHHHcCCCcEEEEEe
Confidence 65543 14566888999999987643
|
| >d2q46a1 c.2.1.2 (A:2-253) Hypothetical protein At5g02240 (T7H20_290) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein At5g02240 (T7H20 290) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=96.65 E-value=0.0019 Score=51.30 Aligned_cols=71 Identities=21% Similarity=0.179 Sum_probs=46.9
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
.||||+||+|.+|..+++.+...|. .|+...+++++.+.+. -+... ..|..+. +.+.+... ++|.|+.++
T Consensus 4 ~tVlVtGatG~iG~~l~~~Ll~~g~~v~v~~~~R~~~~~~~~~--~~~~~~~~d~~~~----~~~~~~~~-~~d~vi~~a 76 (252)
T d2q46a1 4 PTVLVTGASGRTGQIVYKKLKEGSDKFVAKGLVRSAQGKEKIG--GEADVFIGDITDA----DSINPAFQ-GIDALVILT 76 (252)
T ss_dssp CEEEEESTTSTTHHHHHHHHHHTTTTCEEEEEESCHHHHHHTT--CCTTEEECCTTSH----HHHHHHHT-TCSEEEECC
T ss_pred CEEEEECCccHHHHHHHHHHHHCCCcEEEEEEcCCHHHHHhcc--CCcEEEEeeeccc----cccccccc-cceeeEEEE
Confidence 5899999999999999999988885 5777788877655432 12222 1233332 22333222 489999887
Q ss_pred C
Q 019332 231 G 231 (342)
Q Consensus 231 g 231 (342)
+
T Consensus 77 ~ 77 (252)
T d2q46a1 77 S 77 (252)
T ss_dssp C
T ss_pred e
Confidence 6
|
| >d1xxla_ c.66.1.41 (A:) Hypothetical protein YcgJ {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein YcgJ species: Bacillus subtilis [TaxId: 1423]
Probab=96.63 E-value=0.0016 Score=52.02 Aligned_cols=103 Identities=14% Similarity=0.219 Sum_probs=67.8
Q ss_pred hhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHC
Q 019332 143 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 143 al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~ 219 (342)
.|.+.+++++|++||=.| .|.|..+..+++. +++|++++.|+.-.+.+++ +.+.+.+ ..... +.. .+ ...
T Consensus 7 ~l~~~~~~~~~~rILDiG--cGtG~~~~~la~~-~~~v~gvD~S~~~l~~A~~~~~~~~~~~~-~~~~~-d~~-~~-~~~ 79 (234)
T d1xxla_ 7 LMIKTAECRAEHRVLDIG--AGAGHTALAFSPY-VQECIGVDATKEMVEVASSFAQEKGVENV-RFQQG-TAE-SL-PFP 79 (234)
T ss_dssp HHHHHHTCCTTCEEEEES--CTTSHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHHTCCSE-EEEEC-BTT-BC-CSC
T ss_pred HHHHHhCCCCCCEEEEeC--CcCcHHHHHHHHh-CCeEEEEeCChhhhhhhhhhhcccccccc-ccccc-ccc-cc-ccc
Confidence 355678999999999999 4678888888875 6899999999887666653 2333221 11110 110 00 112
Q ss_pred CCCccEEEeCCCh-------hhHHHHHHhhhhCCEEEEEc
Q 019332 220 PEGIDIYFENVGG-------KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 220 ~~~~d~vid~~g~-------~~~~~~~~~l~~~G~~v~~g 252 (342)
++.+|+|+-+..- ..+..+.+.|+|+|+++...
T Consensus 80 ~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~~~~~~ 119 (234)
T d1xxla_ 80 DDSFDIITCRYAAHHFSDVRKAVREVARVLKQDGRFLLVD 119 (234)
T ss_dssp TTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ccccceeeeeceeecccCHHHHHHHHHHeeCCCcEEEEEE
Confidence 2369998864332 35788889999999988753
|
| >d1i9ga_ c.66.1.13 (A:) Probable methyltransferase Rv2118c {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: tRNA(1-methyladenosine) methyltransferase-like domain: Probable methyltransferase Rv2118c species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=96.62 E-value=0.0047 Score=50.04 Aligned_cols=101 Identities=18% Similarity=0.178 Sum_probs=69.8
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHc----C--CCee-EecCCchhHHHHHH
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKF----G--FDEA-FNYKEEPDLNEALK 216 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~----g--~~~v-~~~~~~~~~~~~i~ 216 (342)
...+++||++||=.| .|.|.+++.+|+..|- +|+.+..+++..+.+++.+ + .+.+ +... +..+.
T Consensus 90 ~~l~i~PG~~VLE~G--~GsG~lt~~La~~vgp~G~V~~~d~~~~~~~~Ar~n~~~~~~~~~~nv~~~~~---d~~~~-- 162 (264)
T d1i9ga_ 90 HEGDIFPGARVLEAG--AGSGALTLSLLRAVGPAGQVISYEQRADHAEHARRNVSGCYGQPPDNWRLVVS---DLADS-- 162 (264)
T ss_dssp HHTTCCTTCEEEEEC--CTTSHHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHHHTSCCTTEEEECS---CGGGC--
T ss_pred HHhCCCCCCEEEecC--cCCcHHHHHHHHhhCCCcEEEEecCCHHHHHHHHHhhhhhccCCCceEEEEec---ccccc--
Confidence 457899999999988 5779999999998864 9999999999888877422 1 1221 1111 11110
Q ss_pred HHCCCCccEEE-eCCCh-hhHHHHHHhhhhCCEEEEEce
Q 019332 217 RYFPEGIDIYF-ENVGG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 217 ~~~~~~~d~vi-d~~g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
....+.+|.|| |.-.. ..+..+.++|+|+|+++++..
T Consensus 163 ~~~~~~fDaV~ldlp~P~~~l~~~~~~LkpGG~lv~~~P 201 (264)
T d1i9ga_ 163 ELPDGSVDRAVLDMLAPWEVLDAVSRLLVAGGVLMVYVA 201 (264)
T ss_dssp CCCTTCEEEEEEESSCGGGGHHHHHHHEEEEEEEEEEES
T ss_pred cccCCCcceEEEecCCHHHHHHHHHhccCCCCEEEEEeC
Confidence 11123689655 44433 688999999999999988753
|
| >d2avna1 c.66.1.41 (A:1-246) Hypothetical methyltransferase TM1389 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical methyltransferase TM1389 species: Thermotoga maritima [TaxId: 2336]
Probab=96.59 E-value=0.0032 Score=50.36 Aligned_cols=92 Identities=17% Similarity=0.153 Sum_probs=66.1
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+.++.+||=.| .|.|..+..+++. |++|++++.|++-.+.++ +.+....+..... ++ ....+.+|+|+..
T Consensus 40 ~~~~~~vLDiG--cG~G~~~~~l~~~-~~~v~giD~s~~~l~~a~-~~~~~~~~~~~~~-~l-----~~~~~~fD~ii~~ 109 (246)
T d2avna1 40 LKNPCRVLDLG--GGTGKWSLFLQER-GFEVVLVDPSKEMLEVAR-EKGVKNVVEAKAE-DL-----PFPSGAFEAVLAL 109 (246)
T ss_dssp CCSCCEEEEET--CTTCHHHHHHHTT-TCEEEEEESCHHHHHHHH-HHTCSCEEECCTT-SC-----CSCTTCEEEEEEC
T ss_pred cCCCCEEEEEC--CCCchhccccccc-ceEEEEeecccccccccc-ccccccccccccc-cc-----ccccccccceeee
Confidence 55778999888 4688888888864 899999999999999888 6565554544332 21 1112469998865
Q ss_pred CCh--------hhHHHHHHhhhhCCEEEEE
Q 019332 230 VGG--------KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 230 ~g~--------~~~~~~~~~l~~~G~~v~~ 251 (342)
... ..+..+.++|+|||.++..
T Consensus 110 ~~~~~~~~d~~~~l~~i~r~Lk~gG~~ii~ 139 (246)
T d2avna1 110 GDVLSYVENKDKAFSEIRRVLVPDGLLIAT 139 (246)
T ss_dssp SSHHHHCSCHHHHHHHHHHHEEEEEEEEEE
T ss_pred cchhhhhhhHHHHHHHHHhhcCcCcEEEEE
Confidence 442 2467888999999998754
|
| >d1li4a1 c.2.1.4 (A:190-352) S-adenosylhomocystein hydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=96.54 E-value=0.0098 Score=43.99 Aligned_cols=101 Identities=18% Similarity=0.185 Sum_probs=72.4
Q ss_pred HHHhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHH
Q 019332 140 AYAGFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 140 a~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~ 218 (342)
.+.++.+. ...-.|.+++|.| .|-+|...++.++.+|++|+++...+.+.-.+. --|. .+. .+.+.+.
T Consensus 10 ~~~~~~r~t~~~l~Gk~v~V~G-yG~iG~g~A~~~rg~G~~V~v~e~dp~~al~A~-~dG~-~v~------~~~~a~~-- 78 (163)
T d1li4a1 10 LIDGIKRATDVMIAGKVAVVAG-YGDVGKGCAQALRGFGARVIITEIDPINALQAA-MEGY-EVT------TMDEACQ-- 78 (163)
T ss_dssp HHHHHHHHHCCCCTTCEEEEEC-CSHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTC-EEC------CHHHHTT--
T ss_pred HHHHHHHHhCceecCCEEEEec-cccccHHHHHHHHhCCCeeEeeecccchhHHhh-cCce-Eee------ehhhhhh--
Confidence 44444443 3456899999999 599999999999999999999999887643333 3343 221 2222222
Q ss_pred CCCCccEEEeCCCh-h-hHHHHHHhhhhCCEEEEEcee
Q 019332 219 FPEGIDIYFENVGG-K-MLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 219 ~~~~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g~~ 254 (342)
..|+++-+.|. . .-..-++.|+++..+..+|..
T Consensus 79 ---~adivvtaTGn~~vI~~eh~~~MKdgaIL~N~Ghf 113 (163)
T d1li4a1 79 ---EGNIFVTTTGCIDIILGRHFEQMKDDAIVCNIGHF 113 (163)
T ss_dssp ---TCSEEEECSSCSCSBCHHHHTTCCTTEEEEECSSS
T ss_pred ---hccEEEecCCCccchhHHHHHhccCCeEEEEeccc
Confidence 37999999997 3 345778899999888888764
|
| >d1q0qa2 c.2.1.3 (A:1-125,A:275-300) 1-deoxy-D-xylulose-5-phosphate reductoisomerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: 1-deoxy-D-xylulose-5-phosphate reductoisomerase species: Escherichia coli [TaxId: 562]
Probab=96.49 E-value=0.038 Score=40.22 Aligned_cols=96 Identities=16% Similarity=0.078 Sum_probs=63.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCCh--hhHHHHHHHcCCCeeEecCCchhH---HH--------------
Q 019332 155 CVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSK--DKIDLLKNKFGFDEAFNYKEEPDL---NE-------------- 213 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~--~~~~~~~~~~g~~~v~~~~~~~~~---~~-------------- 213 (342)
+|.|.|+||.||..++.+.+.. .++|++.+-.. +++....++|....++-.++. .. .+
T Consensus 3 ~I~IlGsTGSIG~~tL~Vi~~~~d~f~v~~Lsa~~N~~~L~~q~~~f~pk~v~i~d~~-~~~~l~~~l~~~~~~~~~~~g 81 (151)
T d1q0qa2 3 QLTILGSTGSIGCSTLDVVRHNPEHFRVVALVAGKNVTRMVEQCLEFSPRYAVMDDEA-SAKLLKTMLQQQGSRTEVLSG 81 (151)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTTEEEEEEEESSCHHHHHHHHHHHCCSEEEESSHH-HHHHHHHHHHHTTCCCEEEES
T ss_pred eEEEEcCCcHHHHHHHHHHHhCCCCcEEEEEEecCcHHHHHHHHHHHhhcccccccHH-HHHHHHHHhhhhccccccccC
Confidence 6899999999999999999877 35777655333 333322227777665544332 11 11
Q ss_pred --HHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEE
Q 019332 214 --ALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 214 --~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
.+.++... .+|+|+.+..+ ..+...+..++.+-++.+.
T Consensus 82 ~~~l~~~~~~~~~D~vi~AI~G~aGL~~t~~aik~gk~iaLA 123 (151)
T d1q0qa2 82 QQAACDMAALEDVDQVMAAIVGAAGLLPTLAAIRAGKTILLA 123 (151)
T ss_dssp HHHHHHHHTCTTCCEEEECCSSGGGHHHHHHHHHTTCEEEEC
T ss_pred hHHHHHHhcCCCCCEEEEecCcccHHHHHHHHHhcCCeEEEE
Confidence 12222222 68999998888 8888899999888775543
|
| >d2nxca1 c.66.1.39 (A:1-254) PrmA-like protein TTHA0656 (TT0836) {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Ribosomal protein L11 methyltransferase PrmA domain: PrmA-like protein TTHA0656 (TT0836) species: Thermus thermophilus [TaxId: 274]
Probab=96.48 E-value=0.013 Score=47.14 Aligned_cols=96 Identities=17% Similarity=0.151 Sum_probs=63.7
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-eeEecCCchhHHHHHHHHCCCCcc
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-EAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
..++|++||=.|. |.|..++.+++ .|++|++++.+++-.+.+++ ..|.. .++.. +..+. ...+.+|
T Consensus 117 ~~~~g~~VLDiGc--GsG~l~i~aa~-~g~~V~gvDis~~av~~A~~na~~n~~~~~~~~~----d~~~~---~~~~~fD 186 (254)
T d2nxca1 117 HLRPGDKVLDLGT--GSGVLAIAAEK-LGGKALGVDIDPMVLPQAEANAKRNGVRPRFLEG----SLEAA---LPFGPFD 186 (254)
T ss_dssp HCCTTCEEEEETC--TTSHHHHHHHH-TTCEEEEEESCGGGHHHHHHHHHHTTCCCEEEES----CHHHH---GGGCCEE
T ss_pred hcCccCEEEEccc--chhHHHHHHHh-cCCEEEEEECChHHHHHHHHHHHHcCCceeEEec----ccccc---ccccccc
Confidence 3689999999984 34666665554 68999999999987776663 23443 22221 22222 1224699
Q ss_pred EEEeCCChh----hHHHHHHhhhhCCEEEEEcee
Q 019332 225 IYFENVGGK----MLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 225 ~vid~~g~~----~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+|+-..... .+..+.++|+|+|+++..|..
T Consensus 187 ~V~ani~~~~l~~l~~~~~~~LkpGG~lilSgil 220 (254)
T d2nxca1 187 LLVANLYAELHAALAPRYREALVPGGRALLTGIL 220 (254)
T ss_dssp EEEEECCHHHHHHHHHHHHHHEEEEEEEEEEEEE
T ss_pred hhhhccccccHHHHHHHHHHhcCCCcEEEEEecc
Confidence 988655432 445677899999999987653
|
| >d2jfga1 c.5.1.1 (A:1-93) UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase MurD species: Escherichia coli [TaxId: 562]
Probab=96.46 E-value=0.0039 Score=41.80 Aligned_cols=36 Identities=22% Similarity=0.113 Sum_probs=31.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.|.+|+|.|. |..|+++++++...|++|++.+.+.+
T Consensus 4 ~~K~v~ViGl-G~sG~s~a~~L~~~g~~v~~~D~~~~ 39 (93)
T d2jfga1 4 QGKNVVIIGL-GLTGLSCVDFFLARGVTPRVMDTRMT 39 (93)
T ss_dssp TTCCEEEECC-SHHHHHHHHHHHHTTCCCEEEESSSS
T ss_pred CCCEEEEEeE-CHHHHHHHHHHHHCCCEEEEeeCCcC
Confidence 4578999997 99999999999999999999997554
|
| >d2f1ka2 c.2.1.6 (A:1-165) Prephenate dehydrogenase TyrA {Synechocystis sp. pcc 6803 [TaxId: 1148]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Synechocystis sp. pcc 6803 [TaxId: 1148]
Probab=96.43 E-value=0.016 Score=43.08 Aligned_cols=86 Identities=14% Similarity=0.128 Sum_probs=59.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC-CeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF-DEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|.|.|. |-+|...+..++..|.+|++.++++++.+.++ +.|. +...+.. +.+ ...|+||-|+-..
T Consensus 2 kI~iIG~-G~mG~~lA~~l~~~g~~V~~~d~~~~~~~~a~-~~~~~~~~~~~~------~~~-----~~~DiIilavp~~ 68 (165)
T d2f1ka2 2 KIGVVGL-GLIGASLAGDLRRRGHYLIGVSRQQSTCEKAV-ERQLVDEAGQDL------SLL-----QTAKIIFLCTPIQ 68 (165)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTSCSEEESCG------GGG-----TTCSEEEECSCHH
T ss_pred EEEEEee-cHHHHHHHHHHHHCCCEEEEEECCchHHHHHH-Hhhccceeeeec------ccc-----cccccccccCcHh
Confidence 5889996 99999888888889999999999999888888 7775 3332211 111 2489999888765
Q ss_pred hHHHHHHhh----hhCCEEEEEce
Q 019332 234 MLDAVLLNM----KIHGRIAVCGM 253 (342)
Q Consensus 234 ~~~~~~~~l----~~~G~~v~~g~ 253 (342)
.....++-+ +++-.++.++.
T Consensus 69 ~~~~vl~~l~~~l~~~~iv~~~~s 92 (165)
T d2f1ka2 69 LILPTLEKLIPHLSPTAIVTDVAS 92 (165)
T ss_dssp HHHHHHHHHGGGSCTTCEEEECCS
T ss_pred hhhhhhhhhhhhcccccceeeccc
Confidence 554444444 44445555543
|
| >d1e7wa_ c.2.1.2 (A:) Dihydropteridin reductase (pteridine reductase) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Dihydropteridin reductase (pteridine reductase) species: Leishmania major [TaxId: 5664]
Probab=96.42 E-value=0.0029 Score=51.98 Aligned_cols=40 Identities=13% Similarity=0.135 Sum_probs=31.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC-hhhHHHHH
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS-KDKIDLLK 194 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s-~~~~~~~~ 194 (342)
.+||+||++|+|.+.++.+...|++|+++.++ +++.+.+.
T Consensus 4 VAlITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~~~~~~~ 44 (284)
T d1e7wa_ 4 VALVTGAAKRLGRSIAEGLHAEGYAVCLHYHRSAAEANALS 44 (284)
T ss_dssp EEEETTCSSHHHHHHHHHHHHTTCEEEEEESSCHHHHHHHH
T ss_pred EEEEeCCCCHHHHHHHHHHHHcCCEEEEEeCCCHHHHHHHH
Confidence 35899999999999999999999999987764 44444333
|
| >d1d7oa_ c.2.1.2 (A:) Enoyl-ACP reductase {Oil seed rape (Brassica napus) [TaxId: 3708]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Oil seed rape (Brassica napus) [TaxId: 3708]
Probab=96.41 E-value=0.0043 Score=51.32 Aligned_cols=37 Identities=16% Similarity=0.200 Sum_probs=32.7
Q ss_pred CCCEEEEecCCc--HHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 152 QGECVFISAASG--AVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 152 ~~~~vlI~ga~g--~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
+|.++||+||+| |+|.+.++.+...|++|+.+.+++.
T Consensus 7 ~gK~alVTGass~~GIG~aiA~~la~~Ga~Vvi~~~~~~ 45 (297)
T d1d7oa_ 7 RGKRAFIAGIADDNGYGWAVAKSLAAAGAEILVGTWVPA 45 (297)
T ss_dssp TTCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEEEHHH
T ss_pred CCCEEEEECCCCCchHHHHHHHHHHHCCCEEEEEeCchh
Confidence 678999999876 8999999999999999999887654
|
| >d1vl5a_ c.66.1.41 (A:) Hypothetical protein BH2331 {Bacillus halodurans [TaxId: 86665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein BH2331 species: Bacillus halodurans [TaxId: 86665]
Probab=96.36 E-value=0.0048 Score=48.81 Aligned_cols=101 Identities=16% Similarity=0.200 Sum_probs=67.2
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe--eEecCCchhHHHHHHHH
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE--AFNYKEEPDLNEALKRY 218 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~i~~~ 218 (342)
|.+.++++++++||=.|. |.|..+..+++. |++|++++.|++-.+.+++ +.+... ++..+.. + + ..
T Consensus 7 ll~~~~l~~~~rVLDiGc--G~G~~~~~l~~~-~~~v~gvD~s~~~i~~A~~~~~~~~~~~i~~~~~d~~-~----l-~~ 77 (231)
T d1vl5a_ 7 LMQIAALKGNEEVLDVAT--GGGHVANAFAPF-VKKVVAFDLTEDILKVARAFIEGNGHQQVEYVQGDAE-Q----M-PF 77 (231)
T ss_dssp HHHHHTCCSCCEEEEETC--TTCHHHHHHGGG-SSEEEEEESCHHHHHHHHHHHHHTTCCSEEEEECCC--C----C-CS
T ss_pred HHHhcCCCCcCEEEEecc--cCcHHHHHHHHh-CCEEEEEECCHHHHhhhhhcccccccccccccccccc-c----c-cc
Confidence 346688999999999994 577777777755 7899999999876666552 234432 2222111 1 1 11
Q ss_pred CCCCccEEEeCCC-----h--hhHHHHHHhhhhCCEEEEEce
Q 019332 219 FPEGIDIYFENVG-----G--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 219 ~~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
..+.+|+|+-... . ..+..+.++|+|||+++....
T Consensus 78 ~~~~fD~v~~~~~l~~~~d~~~~l~~~~r~LkpgG~l~i~~~ 119 (231)
T d1vl5a_ 78 TDERFHIVTCRIAAHHFPNPASFVSEAYRVLKKGGQLLLVDN 119 (231)
T ss_dssp CTTCEEEEEEESCGGGCSCHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred cccccccccccccccccCCHHHHHHHHHHhcCCCcEEEEEeC
Confidence 2236999975433 1 367889999999999887543
|
| >d1yqga2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Neisseria meningitidis, serogroup B [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Neisseria meningitidis, serogroup B [TaxId: 487]
Probab=96.35 E-value=0.018 Score=42.27 Aligned_cols=82 Identities=17% Similarity=0.264 Sum_probs=57.9
Q ss_pred EEEEecCCcHHHHHHHH-HHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQ-FAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~-la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|.+.|+ |.+|.+.++ |.+..+.+|++..+++++.+.+.+++|.. +.+..+ . + ...|+||=|+-..
T Consensus 2 kI~fIG~-G~MG~ai~~~l~~~~~~~i~v~~r~~~~~~~l~~~~~~~-~~~~~~--~----v-----~~~Div~lavkP~ 68 (152)
T d1yqga2 2 NVYFLGG-GNMAAAVAGGLVKQGGYRIYIANRGAEKRERLEKELGVE-TSATLP--E----L-----HSDDVLILAVKPQ 68 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSCEEEEECSSHHHHHHHHHHTCCE-EESSCC--C----C-----CTTSEEEECSCHH
T ss_pred EEEEEcC-cHHHHHHHHHHHHCCCCcEEEEeCChhHHHHhhhhcccc-cccccc--c----c-----cccceEEEecCHH
Confidence 5788996 999998777 55554479999999999988887567763 222211 1 1 1378998888776
Q ss_pred hHHHHHHhhhhCCEEE
Q 019332 234 MLDAVLLNMKIHGRIA 249 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v 249 (342)
.+...++-+++.++++
T Consensus 69 ~~~~v~~~l~~~~~~v 84 (152)
T d1yqga2 69 DMEAACKNIRTNGALV 84 (152)
T ss_dssp HHHHHHTTCCCTTCEE
T ss_pred HHHHhHHHHhhcccEE
Confidence 6777777777666654
|
| >d1y1pa1 c.2.1.2 (A:2-343) Aldehyde reductase II {Sporobolomyces salmonicolor [TaxId: 5005]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Aldehyde reductase II species: Sporobolomyces salmonicolor [TaxId: 5005]
Probab=96.28 E-value=0.0044 Score=52.39 Aligned_cols=47 Identities=28% Similarity=0.289 Sum_probs=40.5
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
.-+.+|.+|||+||+|-+|...++.+...|++|++++++.++...++
T Consensus 6 ~~~~~gk~VlVTG~sGfIGs~l~~~Ll~~G~~V~~~vR~~~~~~~~~ 52 (342)
T d1y1pa1 6 AVLPEGSLVLVTGANGFVASHVVEQLLEHGYKVRGTARSASKLANLQ 52 (342)
T ss_dssp CSSCTTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSHHHHHHHH
T ss_pred CCCCCcCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCchhHHHHH
Confidence 44678999999999999999999888888999999999887766554
|
| >d2ahra2 c.2.1.6 (A:1-152) Pyrroline-5-carboxylate reductase ProC {Streptococcus pyogenes [TaxId: 1314]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Pyrroline-5-carboxylate reductase ProC species: Streptococcus pyogenes [TaxId: 1314]
Probab=96.25 E-value=0.015 Score=42.78 Aligned_cols=86 Identities=12% Similarity=0.153 Sum_probs=64.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|.+.|. |-+|.+.+.-....|.++++..++.++.+.+.+++|...+- +..+.++ ..|+||-|+-...
T Consensus 2 kIg~IG~-G~mG~al~~~l~~~~~~i~v~~r~~~~~~~l~~~~g~~~~~------~~~~~~~-----~~dvIilavkp~~ 69 (152)
T d2ahra2 2 KIGIIGV-GKMASAIIKGLKQTPHELIISGSSLERSKEIAEQLALPYAM------SHQDLID-----QVDLVILGIKPQL 69 (152)
T ss_dssp EEEEECC-SHHHHHHHHHHTTSSCEEEEECSSHHHHHHHHHHHTCCBCS------SHHHHHH-----TCSEEEECSCGGG
T ss_pred EEEEEec-cHHHHHHHHHHHhCCCeEEEEcChHHhHHhhccccceeeec------hhhhhhh-----ccceeeeecchHh
Confidence 5788896 99999888866677889999999999888776578864321 2333333 3799999998778
Q ss_pred HHHHHHhhhhCCEEEEEc
Q 019332 235 LDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 235 ~~~~~~~l~~~G~~v~~g 252 (342)
+...++.++++..++.+.
T Consensus 70 ~~~vl~~l~~~~~iis~~ 87 (152)
T d2ahra2 70 FETVLKPLHFKQPIISMA 87 (152)
T ss_dssp HHHHHTTSCCCSCEEECC
T ss_pred HHHHhhhcccceeEeccc
Confidence 888888888877766543
|
| >d1rkxa_ c.2.1.2 (A:) CDP-glucose-4,6-dehydratase {Yersinia pseudotuberculosis [TaxId: 633]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-glucose-4,6-dehydratase species: Yersinia pseudotuberculosis [TaxId: 633]
Probab=96.24 E-value=0.0018 Score=54.99 Aligned_cols=77 Identities=18% Similarity=0.277 Sum_probs=50.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcC----CCe-eEecCCchhHHHHHHHHCCC-CccE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFG----FDE-AFNYKEEPDLNEALKRYFPE-GIDI 225 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g----~~~-v~~~~~~~~~~~~i~~~~~~-~~d~ 225 (342)
.|.+|||+||+|-+|..+++.+...|.+|++++++..+...+.+... ... ..|-.+. + .+.+...+ .+|+
T Consensus 7 ~~KkILVTG~tGfIGs~lv~~Ll~~g~~V~~~~r~~~~~~~~~~~~~~~~~i~~~~~Dl~d~-~---~l~~~~~~~~~~~ 82 (356)
T d1rkxa_ 7 QGKRVFVTGHTGFKGGWLSLWLQTMGATVKGYSLTAPTVPSLFETARVADGMQSEIGDIRDQ-N---KLLESIREFQPEI 82 (356)
T ss_dssp TTCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCSSSSCHHHHTTTTTTSEEEECCTTCH-H---HHHHHHHHHCCSE
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCCCEEEEEECCCCccHHHHhhhhcccCCeEEEeeccCh-H---hhhhhhhhchhhh
Confidence 46899999999999999999999999999999987654322211221 111 1233333 2 22222223 5789
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
++.+++.
T Consensus 83 v~~~aa~ 89 (356)
T d1rkxa_ 83 VFHMAAQ 89 (356)
T ss_dssp EEECCSC
T ss_pred hhhhhcc
Confidence 9998874
|
| >d1orra_ c.2.1.2 (A:) CDP-tyvelose-2-epimerase {Salmonella typhi [TaxId: 90370]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: CDP-tyvelose-2-epimerase species: Salmonella typhi [TaxId: 90370]
Probab=96.09 E-value=0.0072 Score=50.58 Aligned_cols=73 Identities=19% Similarity=0.272 Sum_probs=46.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeC--Chhh---HHHHHHHcCCCeeE--ecCCchhHHHHHHHHCCC-CccEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAG--SKDK---IDLLKNKFGFDEAF--NYKEEPDLNEALKRYFPE-GIDIY 226 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~--s~~~---~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~~~-~~d~v 226 (342)
+|||+||+|-+|...+..+...|.+|+++++ ...+ ...+. ..+--.++ |..+. +.+.+...+ .+|+|
T Consensus 2 KILVTGatGfIGs~lv~~Ll~~g~~V~~id~~~~~~~~~~~~~~~-~~~~~~~i~~Di~~~----~~l~~~~~~~~~d~V 76 (338)
T d1orra_ 2 KLLITGGCGFLGSNLASFALSQGIDLIVFDNLSRKGATDNLHWLS-SLGNFEFVHGDIRNK----NDVTRLITKYMPDSC 76 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSTTHHHHHHHHH-TTCCCEEEECCTTCH----HHHHHHHHHHCCSEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCcCEEEEEECCCcccchhHHHHhh-ccCCcEEEEcccCCH----HHHHHHHHhcCCceE
Confidence 6999999999999999988888999999863 1222 22333 22221222 33332 223333323 58999
Q ss_pred EeCCCh
Q 019332 227 FENVGG 232 (342)
Q Consensus 227 id~~g~ 232 (342)
|.+++.
T Consensus 77 ih~aa~ 82 (338)
T d1orra_ 77 FHLAGQ 82 (338)
T ss_dssp EECCCC
T ss_pred Eeeccc
Confidence 998873
|
| >d1uaya_ c.2.1.2 (A:) Type II 3-hydroxyacyl-CoA dehydrogenase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Type II 3-hydroxyacyl-CoA dehydrogenase species: Thermus thermophilus [TaxId: 274]
Probab=96.08 E-value=0.0029 Score=50.61 Aligned_cols=37 Identities=14% Similarity=0.169 Sum_probs=33.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
+.++||+||++++|.+.++.+...|++|+++++++++
T Consensus 1 DK~alITGas~GIG~aiA~~la~~Ga~V~i~~~~~~~ 37 (241)
T d1uaya_ 1 ERSALVTGGASGLGRAAALALKARGYRVVVLDLRREG 37 (241)
T ss_dssp CCEEEEETTTSHHHHHHHHHHHHHTCEEEEEESSCCS
T ss_pred CCEEEEeCCCCHHHHHHHHHHHHCCCEEEEEECCccc
Confidence 3578999999999999999999999999999987764
|
| >d1uh5a_ c.2.1.2 (A:) Enoyl-ACP reductase {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Enoyl-ACP reductase species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=96.03 E-value=0.017 Score=48.47 Aligned_cols=39 Identities=8% Similarity=-0.063 Sum_probs=31.8
Q ss_pred CCEEEEecC--CcHHHHHHHHHHHHcCCEEEEEeCChhhHH
Q 019332 153 GECVFISAA--SGAVGQLVGQFAKLLGCYVVGSAGSKDKID 191 (342)
Q Consensus 153 ~~~vlI~ga--~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~ 191 (342)
++..||+|+ +.|+|.+.++.+...|++|+.+.++.....
T Consensus 2 ~kVAlITGaa~s~GIG~aiA~~la~~GA~V~i~~~~~~~~~ 42 (329)
T d1uh5a_ 2 EDICFIAGIGDTNGYGWGIAKELSKRNVKIIFGIWPPVYNI 42 (329)
T ss_dssp CCEEEEECCSSSSSHHHHHHHHHHHTTCEEEEEECGGGHHH
T ss_pred CcEEEEeCCCCCChHHHHHHHHHHHcCCEEEEEeCchhhhh
Confidence 466799994 469999999999999999999887765433
|
| >d2bzga1 c.66.1.36 (A:17-245) Thiopurine S-methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Thiopurine S-methyltransferase domain: Thiopurine S-methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.99 E-value=0.012 Score=46.57 Aligned_cols=102 Identities=18% Similarity=0.122 Sum_probs=66.3
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCee------------E-------ecCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEA------------F-------NYKE 207 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v------------~-------~~~~ 207 (342)
...+.++.+||..|. |.|..+..+|+ .|++|++++.|++-.+.++++.+.... . +...
T Consensus 40 ~l~~~~~~rvLd~GC--G~G~~a~~LA~-~G~~V~gvD~S~~ai~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~ 116 (229)
T d2bzga1 40 FLKGKSGLRVFFPLC--GKAVEMKWFAD-RGHSVVGVEISELGIQEFFTEQNLSYSEEPITEIPGTKVFKSSSGNISLYC 116 (229)
T ss_dssp HHTTCCSCEEEETTC--TTCTHHHHHHH-TTCEEEEECSCHHHHHHHHHHTTCCEEEEECTTSTTCEEEEETTSSEEEEE
T ss_pred hcCCCCCCEEEEeCC--CCcHHHHHHHh-CCCcEEEEeCCHHHHHHHHHHhhccccccchhcccccceeeecCCcEEEEE
Confidence 346788999999984 56888888887 599999999999887777744432110 0 0000
Q ss_pred chhHHHHHHHHCCCCccEEEeCCCh---------hhHHHHHHhhhhCCEEEEEce
Q 019332 208 EPDLNEALKRYFPEGIDIYFENVGG---------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 208 ~~~~~~~i~~~~~~~~d~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
. ++. .+.....+.+|.|+++..- ..+..+.++|+|+|+++....
T Consensus 117 ~-d~~-~l~~~~~~~fd~i~~~~~l~~~~~~~r~~~~~~~~~~LkpgG~~~l~~~ 169 (229)
T d2bzga1 117 C-SIF-DLPRTNIGKFDMIWDRGALVAINPGDRKCYADTMFSLLGKKFQYLLCVL 169 (229)
T ss_dssp S-CGG-GGGGSCCCCEEEEEESSSTTTSCGGGHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred c-chh-hccccccCceeEEEEEEEEEeccchhhHHHHHHHHhhcCCcceEEEEEc
Confidence 0 110 1111112368999986541 256788899999999876554
|
| >d1i24a_ c.2.1.2 (A:) Sulfolipid biosynthesis protein SQD1 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Sulfolipid biosynthesis protein SQD1 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.99 E-value=0.0086 Score=51.52 Aligned_cols=32 Identities=16% Similarity=0.084 Sum_probs=29.1
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSA 184 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~ 184 (342)
|.+|||+||+|-+|..+++.+...|.+|++++
T Consensus 1 g~kILVTGatGfiG~~lv~~Ll~~g~~V~~iD 32 (393)
T d1i24a_ 1 GSRVMVIGGDGYCGWATALHLSKKNYEVCIVD 32 (393)
T ss_dssp -CEEEEETTTSHHHHHHHHHHHHTTCEEEEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHHCcCEEEEEe
Confidence 57899999999999999999999999999986
|
| >d1u2za_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=95.98 E-value=0.03 Score=48.07 Aligned_cols=109 Identities=22% Similarity=0.271 Sum_probs=67.5
Q ss_pred HHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHH---c-------CC--C-eeEec
Q 019332 140 AYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNK---F-------GF--D-EAFNY 205 (342)
Q Consensus 140 a~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~---~-------g~--~-~v~~~ 205 (342)
....+ +..++++|+++|=+| .|+|..++++|+..|+ +|+++..++...+.+++. + |. . ..+..
T Consensus 205 i~~Il-~~l~Lkpgd~fLDLG--CG~G~~vl~aA~~~g~~~v~GIDiS~~~i~~Ak~~~~e~~~~~~~~g~~~~~~~~~~ 281 (406)
T d1u2za_ 205 LSDVY-QQCQLKKGDTFMDLG--SGVGNCVVQAALECGCALSFGCEIMDDASDLTILQYEELKKRCKLYGMRLNNVEFSL 281 (406)
T ss_dssp HHHHH-HHTTCCTTCEEEEES--CTTSHHHHHHHHHHCCSEEEEEECCHHHHHHHHHHHHHHHHHHHHTTBCCCCEEEEE
T ss_pred HHHHH-HHhCCCCCCEEEeCC--CCCcHHHHHHHHHcCCCeEEEEeCCHHHHHHHHHHHHHHhhhhhhhccccccceeee
Confidence 34444 567899999998888 7899999999999987 899999998766666521 1 11 0 11111
Q ss_pred CCchhHHHHHHHHCCCCccEEEeC-CC--h---hhHHHHHHhhhhCCEEEEEc
Q 019332 206 KEEPDLNEALKRYFPEGIDIYFEN-VG--G---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 206 ~~~~~~~~~i~~~~~~~~d~vid~-~g--~---~~~~~~~~~l~~~G~~v~~g 252 (342)
.......+...... ..+|+++-. .- . ..+...++.|+|||++|..-
T Consensus 282 ~~~f~~~~~~d~~~-~~adVV~inn~~f~~~l~~~L~ei~r~LKPGGrIVs~~ 333 (406)
T d1u2za_ 282 KKSFVDNNRVAELI-PQCDVILVNNFLFDEDLNKKVEKILQTAKVGCKIISLK 333 (406)
T ss_dssp SSCSTTCHHHHHHG-GGCSEEEECCTTCCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred eechhhcccccccc-ccceEEEEecccCchHHHHHHHHHHHhcCCCcEEEEec
Confidence 11000011111111 136777642 21 1 24667888999999998754
|
| >d1ygya1 c.2.1.4 (A:99-282) Phosphoglycerate dehydrogenase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.90 E-value=0.021 Score=43.46 Aligned_cols=88 Identities=23% Similarity=0.233 Sum_probs=62.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.+.++.|.|. |.+|...+++++.+|.+|++..+...+.. .. ..+... . ++.+.+++ .|+|.-+.
T Consensus 42 l~~k~vgiiG~-G~IG~~va~~~~~fg~~v~~~d~~~~~~~-~~-~~~~~~----~---~l~ell~~-----sDiv~~~~ 106 (184)
T d1ygya1 42 IFGKTVGVVGL-GRIGQLVAQRIAAFGAYVVAYDPYVSPAR-AA-QLGIEL----L---SLDDLLAR-----ADFISVHL 106 (184)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCHHH-HH-HHTCEE----C---CHHHHHHH-----CSEEEECC
T ss_pred ccceeeeeccc-cchhHHHHHHhhhccceEEeecCCCChhH-Hh-hcCcee----c---cHHHHHhh-----CCEEEEcC
Confidence 35789999996 99999999999999999999987665433 33 344321 1 44444544 78887765
Q ss_pred Ch-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 231 GG-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
.- + .-...++.++++..+|.++-
T Consensus 107 Plt~~T~~lin~~~l~~mk~~a~lIN~sR 135 (184)
T d1ygya1 107 PKTPETAGLIDKEALAKTKPGVIIVNAAR 135 (184)
T ss_dssp CCSTTTTTCBCHHHHTTSCTTEEEEECSC
T ss_pred CCCchhhhhhhHHHHhhhCCCceEEEecc
Confidence 53 2 12467778888888888764
|
| >d1ydwa1 c.2.1.3 (A:6-133,A:305-360) Probable oxidoreductase At4g09670 {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Probable oxidoreductase At4g09670 species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.85 E-value=0.22 Score=37.26 Aligned_cols=88 Identities=13% Similarity=0.111 Sum_probs=58.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEe-CChhhHHHHHHHcCCCe-eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSA-GSKDKIDLLKNKFGFDE-AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~-~s~~~~~~~~~~~g~~~-v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
++.|.|. |.+|...++..+.. ++++++++ .++++.+.+.++++... .-.++ ++.+.+.+ ..+|+|+-|..
T Consensus 3 ki~iIG~-G~~g~~~~~~l~~~~~~~i~ai~d~~~~~~~~~~~~~~~~~~~~~~~---~~~~ll~~---~~iD~v~I~tp 75 (184)
T d1ydwa1 3 RIGVMGC-ADIARKVSRAIHLAPNATISGVASRSLEKAKAFATANNYPESTKIHG---SYESLLED---PEIDALYVPLP 75 (184)
T ss_dssp EEEEESC-CTTHHHHHHHHHHCTTEEEEEEECSSHHHHHHHHHHTTCCTTCEEES---SHHHHHHC---TTCCEEEECCC
T ss_pred EEEEEcC-CHHHHHHHHHHHhCCCCEEEEEEeCCccccccchhccccccceeecC---cHHHhhhc---cccceeeeccc
Confidence 5889995 89998877777766 66888765 45566555544777531 11122 44444432 25999999988
Q ss_pred h-hhHHHHHHhhhhCCEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v 249 (342)
. ..++.+..++..+-.++
T Consensus 76 ~~~h~~~~~~~l~~g~~v~ 94 (184)
T d1ydwa1 76 TSLHVEWAIKAAEKGKHIL 94 (184)
T ss_dssp GGGHHHHHHHHHTTTCEEE
T ss_pred chhhcchhhhhhhccceee
Confidence 8 67888888888775544
|
| >d1jaya_ c.2.1.6 (A:) Coenzyme F420H2:NADP+ oxidoreductase (FNO) {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Coenzyme F420H2:NADP+ oxidoreductase (FNO) species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=95.83 E-value=0.008 Score=46.00 Aligned_cols=43 Identities=16% Similarity=0.234 Sum_probs=37.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~ 197 (342)
+|.|+||+|++|.+.++.+...|++|++..|++++.+.+.+++
T Consensus 2 ki~vigGaG~iG~alA~~la~~G~~V~l~~R~~e~~~~l~~~i 44 (212)
T d1jaya_ 2 RVALLGGTGNLGKGLALRLATLGHEIVVGSRREEKAEAKAAEY 44 (212)
T ss_dssp EEEEETTTSHHHHHHHHHHHTTTCEEEEEESSHHHHHHHHHHH
T ss_pred EEEEEeCCcHHHHHHHHHHHHCCCEEEEEECCHHHHHHHHHHH
Confidence 5888877899999999999999999999999998877665333
|
| >d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1, COMTD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: COMT domain-containing protein 1, COMTD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.75 E-value=0.015 Score=45.57 Aligned_cols=105 Identities=13% Similarity=0.066 Sum_probs=70.7
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHH--
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRY-- 218 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~-- 218 (342)
...+.....+||=+| ++.|+.++.+|+.+ +.+|+.+..+++..+.+++ +.|....+..... +..+.+.+.
T Consensus 53 ~L~~~~~~k~vLEiG--t~~GyStl~~a~al~~~g~i~tie~~~~~~~~A~~~~~~ag~~~~i~~~~G-da~e~l~~~~~ 129 (219)
T d2avda1 53 NLARLIQAKKALDLG--TFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLK-PALETLDELLA 129 (219)
T ss_dssp HHHHHTTCCEEEEEC--CTTSHHHHHHHTTSCTTCEEEEEESCSHHHHHHHHHHHHTTCTTTEEEEES-CHHHHHHHHHH
T ss_pred HHHHccCCCeEEEEe--chhhHHHHHHHHhCCCCceEEEEeechhHHHHHHHHHHhcCccceEEEEEe-ehhhcchhhhh
Confidence 345566778999999 78899999999876 4699999999987666653 3455433333333 434444332
Q ss_pred --CCCCccEEEeCCC-h---hhHHHHHHhhhhCCEEEEEce
Q 019332 219 --FPEGIDIYFENVG-G---KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 219 --~~~~~d~vid~~g-~---~~~~~~~~~l~~~G~~v~~g~ 253 (342)
..+.+|+||--.. . ..++.+++.|++||.++.=..
T Consensus 130 ~~~~~~fD~ifiD~dk~~y~~~~~~~~~lL~~GGvii~Dn~ 170 (219)
T d2avda1 130 AGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAVLRV 170 (219)
T ss_dssp TTCTTCEEEEEECSCSTTHHHHHHHHHHHEEEEEEEEEECC
T ss_pred hcccCCccEEEEeCCHHHHHHHHHHHHHHhcCCcEEEEeCC
Confidence 2336898764333 2 357789999999999886433
|
| >d2czca2 c.2.1.3 (A:1-139,A:302-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.69 E-value=0.11 Score=38.74 Aligned_cols=97 Identities=16% Similarity=0.050 Sum_probs=62.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeC--ChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC----------CC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAG--SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF----------PE 221 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~--s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~----------~~ 221 (342)
+|.|.|- |-||...++.+.... .+++++.. .+.....+. +++.+... .... . .....+.. ..
T Consensus 4 rIaINGf-GRIGR~v~Ral~~~~dieiVaINd~~~~~~~~~l~-~~~~~~~~-~~~~-~-~~~~~~~~~~~~~~~~~~~~ 78 (172)
T d2czca2 4 KVGVNGY-GTIGKRVAYAVTKQDDMELIGITKTKPDFEAYRAK-ELGIPVYA-ASEE-F-IPRFEKEGFEVAGTLNDLLE 78 (172)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCTTEEEEEEEESSCSHHHHHHH-HTTCCEEE-SSGG-G-HHHHHHHTCCCSCBHHHHHT
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCceEEEEecCCChHHHHHhh-hcCceeec-cccc-c-eeeecccCccccchhhhhhc
Confidence 6899996 999998888776544 57776653 233444555 66654322 1111 1 11111110 02
Q ss_pred CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 222 GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 222 ~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
++|+|+||.|. ...+.+..++..+-+.|..+.+..
T Consensus 79 ~vDvViEcTG~f~~~~~~~~hl~~G~k~Vi~s~~~~ 114 (172)
T d2czca2 79 KVDIIVDATPGGIGAKNKPLYEKAGVKAIFQGGEKA 114 (172)
T ss_dssp TCSEEEECCSTTHHHHHHHHHHHHTCEEEECTTSCG
T ss_pred cCCEEEECCCCCCCHHHHHHHHHcCCCEEEECCCCc
Confidence 59999999998 777888899999999998887544
|
| >d1udca_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Escherichia coli [TaxId: 562]
Probab=95.68 E-value=0.022 Score=47.70 Aligned_cols=73 Identities=16% Similarity=0.185 Sum_probs=46.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeC----ChhhHHHHHHHc---CCCe-eEecCCchhHHHHHHHHCCCCccEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAG----SKDKIDLLKNKF---GFDE-AFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~----s~~~~~~~~~~~---g~~~-v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
+|||+||+|-+|...+..+...|.+|+++++ ..+...... .+ ++.. ..|-.+...+.+.+++ .++|+|
T Consensus 2 KiLItG~tGfIG~~l~~~L~~~g~~V~~~d~~~~~~~~~~~~~~-~~~~~~~~~~~~Dl~d~~~l~~~~~~---~~~d~V 77 (338)
T d1udca_ 2 RVLVTGGSGYIGSHTCVQLLQNGHDVIILDNLCNSKRSVLPVIE-RLGGKHPTFVEGDIRNEALMTEILHD---HAIDTV 77 (338)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEECCSSCCTTHHHHHH-HHHTSCCEEEECCTTCHHHHHHHHHH---TTCSEE
T ss_pred EEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcchhhHHHHH-hhcCCCCEEEEeecCCHHHHHHHHhc---cCCCEE
Confidence 5999999999999999999889999999864 222223222 22 2221 1233333123333332 259999
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
|.+++
T Consensus 78 iHlAa 82 (338)
T d1udca_ 78 IHFAG 82 (338)
T ss_dssp EECCS
T ss_pred EECCC
Confidence 99886
|
| >d1nw3a_ c.66.1.31 (A:) Catalytic, N-terminal domain of histone methyltransferase Dot1l {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Catalytic, N-terminal domain of histone methyltransferase Dot1l domain: Catalytic, N-terminal domain of histone methyltransferase Dot1l species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.61 E-value=0.1 Score=43.41 Aligned_cols=101 Identities=20% Similarity=0.235 Sum_probs=67.1
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHH----------HcCC--C--eeE--ecC
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKN----------KFGF--D--EAF--NYK 206 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~----------~~g~--~--~v~--~~~ 206 (342)
+.+..+++++++||=.| .|.|..+.++|+..++ +++++..+++-.+.+++ .+|. . .++ |..
T Consensus 143 ~~~~~~l~~~~~vlD~G--cG~G~~~~~~a~~~~~~~~~Gid~s~~~~~~a~~~~~~~~~~~~~~g~~~~~i~~~~gd~~ 220 (328)
T d1nw3a_ 143 MIDEIKMTDDDLFVDLG--SGVGQVVLQVAAATNCKHHYGVEKADIPAKYAETMDREFRKWMKWYGKKHAEYTLERGDFL 220 (328)
T ss_dssp HHHHSCCCTTCEEEEET--CTTSHHHHHHHHHCCCSEEEEEECSHHHHHHHHHHHHHHHHHHHHHTCCCCCEEEEECCTT
T ss_pred HHHHcCCCCCCEEEEcC--CCCCHHHHHHHHHhCCCeEEEEeCCHHHHHHHHHHHHHHHHHhhhccccCCceEEEECccc
Confidence 33667899999999888 6889999999999888 89999999876655542 1222 1 122 222
Q ss_pred CchhHHHHHHHHCCCCccEEEeC-CC--h---hhHHHHHHhhhhCCEEEEEc
Q 019332 207 EEPDLNEALKRYFPEGIDIYFEN-VG--G---KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 207 ~~~~~~~~i~~~~~~~~d~vid~-~g--~---~~~~~~~~~l~~~G~~v~~g 252 (342)
+. ++.+.+.+ +|+|+-. .. . ..+...++.|+|||++|+.-
T Consensus 221 ~~-~~~~~~~~-----advi~~~~~~f~~~~~~~l~e~~r~LKpGg~iv~~~ 266 (328)
T d1nw3a_ 221 SE-EWRERIAN-----TSVIFVNNFAFGPEVDHQLKERFANMKEGGRIVSSK 266 (328)
T ss_dssp SH-HHHHHHHH-----CSEEEECCTTTCHHHHHHHHHHHTTCCTTCEEEESS
T ss_pred cc-ccccccCc-----ceEEEEcceecchHHHHHHHHHHHhCCCCcEEEEec
Confidence 22 34443332 6777632 21 1 24566778899999998754
|
| >d1db3a_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Escherichia coli [TaxId: 562]
Probab=95.59 E-value=0.0093 Score=50.67 Aligned_cols=34 Identities=21% Similarity=0.311 Sum_probs=29.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
..|||+||+|-+|..++..+...|.+|+++++..
T Consensus 2 K~vLITGatGfiGs~lv~~Ll~~g~~V~~~~r~~ 35 (357)
T d1db3a_ 2 KVALITGVTGQDGSYLAEFLLEKGYEVHGIKRRA 35 (357)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEECC--
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 4689999999999999999988899999999743
|
| >d1j4aa1 c.2.1.4 (A:104-300) D-lactate dehydrogenase {Lactobacillus helveticus [TaxId: 1587]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-lactate dehydrogenase species: Lactobacillus helveticus [TaxId: 1587]
Probab=95.55 E-value=0.035 Score=42.60 Aligned_cols=86 Identities=20% Similarity=0.205 Sum_probs=60.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.+|.|+|- |.||...+++++.+|++|++.++..+... . ..+. . . . ++.+.+++ .|++..+..
T Consensus 42 ~gk~vgIiG~-G~IG~~va~~l~~fg~~V~~~d~~~~~~~-~--~~~~-~---~--~-~l~~~l~~-----sDii~~~~p 105 (197)
T d1j4aa1 42 RDQVVGVVGT-GHIGQVFMQIMEGFGAKVITYDIFRNPEL-E--KKGY-Y---V--D-SLDDLYKQ-----ADVISLHVP 105 (197)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCHHH-H--HTTC-B---C--S-CHHHHHHH-----CSEEEECSC
T ss_pred cCCeEEEecc-cccchhHHHhHhhhcccccccCccccccc-c--ccee-e---e--c-cccccccc-----cccccccCC
Confidence 5789999996 99999999999999999999986654322 1 2222 1 1 1 44555554 788887765
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
. + .-...++.|+++..+|.++-
T Consensus 106 lt~~T~~li~~~~l~~mk~~a~lIN~sR 133 (197)
T d1j4aa1 106 DVPANVHMINDESIAKMKQDVVIVNVSR 133 (197)
T ss_dssp CCGGGTTCBSHHHHHHSCTTEEEEECSC
T ss_pred ccccccccccHHHHhhhCCccEEEecCc
Confidence 3 2 22567788888888888764
|
| >d2bkaa1 c.2.1.2 (A:5-236) TAT-interacting protein TIP30 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: TAT-interacting protein TIP30 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.53 E-value=0.0025 Score=50.82 Aligned_cols=75 Identities=24% Similarity=0.253 Sum_probs=47.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
.+.+|||+||+|-+|...++.+...|. +|+++.|++.+...-. .-... .+.|..+. +.+.+... ++|+++.
T Consensus 13 ~~k~IlItGaTG~iG~~l~~~Ll~~g~~~~v~~~~R~~~~~~~~~-~~~i~~~~~D~~~~----~~~~~~~~-~~d~vi~ 86 (232)
T d2bkaa1 13 QNKSVFILGASGETGRVLLKEILEQGLFSKVTLIGRRKLTFDEEA-YKNVNQEVVDFEKL----DDYASAFQ-GHDVGFC 86 (232)
T ss_dssp TCCEEEEECTTSHHHHHHHHHHHHHTCCSEEEEEESSCCCCCSGG-GGGCEEEECCGGGG----GGGGGGGS-SCSEEEE
T ss_pred CCCEEEEECCCcHHHHHHHHHHHhCCCCCEEEEEecChhhhcccc-cceeeeeeeccccc----cccccccc-ccccccc
Confidence 346899999999999999998877775 8999998764322111 11111 12233221 22332222 5999999
Q ss_pred CCCh
Q 019332 229 NVGG 232 (342)
Q Consensus 229 ~~g~ 232 (342)
|+|.
T Consensus 87 ~~~~ 90 (232)
T d2bkaa1 87 CLGT 90 (232)
T ss_dssp CCCC
T ss_pred cccc
Confidence 9985
|
| >d1n7ha_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Thale-cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Thale-cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=95.44 E-value=0.013 Score=48.98 Aligned_cols=33 Identities=21% Similarity=0.265 Sum_probs=30.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
.++||+||+|-+|..++..+...|.+|+++++.
T Consensus 2 k~~LVTGatGfiG~~lv~~Ll~~g~~V~~~~r~ 34 (339)
T d1n7ha_ 2 KIALITGITGQDGSYLTEFLLGKGYEVHGLIRR 34 (339)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECC
T ss_pred CEEEEeCCccHHHHHHHHHHHHCcCEEEEEECC
Confidence 479999999999999999999899999999974
|
| >d1vl0a_ c.2.1.2 (A:) DTDP-4-dehydrorhamnose reductase RfbD {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: DTDP-4-dehydrorhamnose reductase RfbD species: Clostridium acetobutylicum [TaxId: 1488]
Probab=95.39 E-value=0.018 Score=46.62 Aligned_cols=32 Identities=19% Similarity=0.234 Sum_probs=29.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
+|||+||+|-+|..++..++..|.+|++++++
T Consensus 3 KIlItGasGfiG~~l~~~L~~~g~~Vi~~~r~ 34 (281)
T d1vl0a_ 3 KILITGANGQLGREIQKQLKGKNVEVIPTDVQ 34 (281)
T ss_dssp EEEEESTTSHHHHHHHHHHTTSSEEEEEECTT
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCEEEEeech
Confidence 59999999999999999999999999999865
|
| >d1fjha_ c.2.1.2 (A:) 3-alpha-hydroxysteroid dehydrogenase {Comamonas testosteroni [TaxId: 285]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: 3-alpha-hydroxysteroid dehydrogenase species: Comamonas testosteroni [TaxId: 285]
Probab=95.39 E-value=0.0085 Score=48.24 Aligned_cols=34 Identities=18% Similarity=0.261 Sum_probs=30.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.|||+||++++|.+.++.+...|++|++++++++
T Consensus 3 VvlITGas~GIG~aiA~~la~~Ga~V~~~~~~~~ 36 (257)
T d1fjha_ 3 IIVISGCATGIGAATRKVLEAAGHQIVGIDIRDA 36 (257)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEESSSS
T ss_pred EEEEeCCCCHHHHHHHHHHHHCCCEEEEEECChH
Confidence 5799999999999999999999999999998754
|
| >d1nvmb1 c.2.1.3 (B:1-131,B:287-312) Acetaldehyde dehydrogenase (acylating) {Pseudomonas sp. [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Acetaldehyde dehydrogenase (acylating) species: Pseudomonas sp. [TaxId: 306]
Probab=95.39 E-value=0.11 Score=38.14 Aligned_cols=92 Identities=20% Similarity=0.185 Sum_probs=55.7
Q ss_pred CEEEEecCCcHHHH-HHHHHHHHcCC-EEEEEeCCh-h--hHHHHHHHcCCCeeEecCCchhHHHHHHHHCC-CCccEEE
Q 019332 154 ECVFISAASGAVGQ-LVGQFAKLLGC-YVVGSAGSK-D--KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP-EGIDIYF 227 (342)
Q Consensus 154 ~~vlI~ga~g~vG~-~ai~la~~~ga-~Vi~~~~s~-~--~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vi 227 (342)
-+|.|.| +|.+|. ..+++.+.... +++++++.+ + +..+++ ++|.... + ...+.+.+... .++|+||
T Consensus 5 irvaIIG-aG~ig~~~~~~~l~~~~~~el~avas~~~~~~~~~~a~-~~~i~~~--~----~~~d~l~~~~~~~~iDiVf 76 (157)
T d1nvmb1 5 LKVAIIG-SGNIGTDLMIKVLRNAKYLEMGAMVGIDAASDGLARAQ-RMGVTTT--Y----AGVEGLIKLPEFADIDFVF 76 (157)
T ss_dssp EEEEEEC-CSHHHHHHHHHHHHHCSSEEEEEEECSCTTCHHHHHHH-HTTCCEE--S----SHHHHHHHSGGGGGEEEEE
T ss_pred cEEEEEc-CcHHHHHHHHHHHhhCCcceEEEEEecchhccchhhhh-hcCCccc--c----cceeeeeecccccccCEEE
Confidence 4789999 699987 56778776654 888887533 2 335566 7776432 2 11233333222 2699999
Q ss_pred eCCCh-hhHH--HHHHhhhhCCEEEEEce
Q 019332 228 ENVGG-KMLD--AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 228 d~~g~-~~~~--~~~~~l~~~G~~v~~g~ 253 (342)
++... .... ...+.++.|-.+++...
T Consensus 77 ~ATpag~h~~~~~~~~aa~~G~~VID~s~ 105 (157)
T d1nvmb1 77 DATSASAHVQNEALLRQAKPGIRLIDLTP 105 (157)
T ss_dssp ECSCHHHHHHHHHHHHHHCTTCEEEECST
T ss_pred EcCCchhHHHhHHHHHHHHcCCEEEEccc
Confidence 98875 4444 33445655666666544
|
| >d2frna1 c.66.1.47 (A:19-278) Hypothetical protein PH0793 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Met-10+ protein-like domain: Hypothetical protein PH0793 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=95.38 E-value=0.026 Score=45.47 Aligned_cols=95 Identities=18% Similarity=0.107 Sum_probs=64.1
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC---eeEecCCchhHHHHHHHHCCC-
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD---EAFNYKEEPDLNEALKRYFPE- 221 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~---~v~~~~~~~~~~~~i~~~~~~- 221 (342)
.+++|++||-.++ |+|..++.+|+..+++|++++.+++..+.+++. .|.. .+++.+. ++....
T Consensus 104 ~~~~g~~VlD~~a--G~G~~~l~~a~~~~~~V~avd~n~~a~~~~~~N~~~n~l~~~v~~~~~D~--------~~~~~~~ 173 (260)
T d2frna1 104 VAKPDELVVDMFA--GIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDN--------RDFPGEN 173 (260)
T ss_dssp HCCTTCEEEETTC--TTTTTHHHHHHHTCCEEEEECCCHHHHHHHHHHHHHTTCTTTEEEECSCT--------TTCCCCS
T ss_pred hcCCccEEEECcc--eEcHHHHHHHHhCCcEEEEecCCHHHHHHHHHHHHHhCCCceEEEEEcch--------HHhccCC
Confidence 3689999999884 667777788877556999999999887777642 2442 2232221 122223
Q ss_pred CccEE-EeCC-Ch-hhHHHHHHhhhhCCEEEEEce
Q 019332 222 GIDIY-FENV-GG-KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 ~~d~v-id~~-g~-~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+|.| ++.. .+ ..+..+++.++++|.+.....
T Consensus 174 ~~D~Ii~~~p~~~~~~l~~a~~~l~~gG~lh~~~~ 208 (260)
T d2frna1 174 IADRILMGYVVRTHEFIPKALSIAKDGAIIHYHNT 208 (260)
T ss_dssp CEEEEEECCCSSGGGGHHHHHHHEEEEEEEEEEEE
T ss_pred CCCEEEECCCCchHHHHHHHHhhcCCCCEEEEEec
Confidence 58855 5433 23 688899999999998766554
|
| >d2hmva1 c.2.1.9 (A:7-140) Ktn bsu222 {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn bsu222 species: Bacillus subtilis [TaxId: 1423]
Probab=95.38 E-value=0.028 Score=40.10 Aligned_cols=72 Identities=14% Similarity=0.182 Sum_probs=52.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeE-ecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAF-NYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~-~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+++|.|. |-+|..+++.+...|.+|++++.++++.+.++ +.+...++ |..++ + .+++..-..+|.++-+.+.
T Consensus 2 ~~iIiG~-G~~G~~la~~L~~~g~~vvvid~d~~~~~~~~-~~~~~~~~gd~~~~-~---~l~~a~i~~a~~vi~~~~~ 74 (134)
T d2hmva1 2 QFAVIGL-GRFGGSIVKELHRMGHEVLAVDINEEKVNAYA-SYATHAVIANATEE-N---ELLSLGIRNFEYVIVAIGA 74 (134)
T ss_dssp CEEEECC-SHHHHHHHHHHHHTTCCCEEEESCHHHHHHTT-TTCSEEEECCTTCT-T---HHHHHTGGGCSEEEECCCS
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCeEEEecCcHHHHHHHH-HhCCcceeeecccc-h---hhhccCCccccEEEEEcCc
Confidence 4778886 99999999999999999999999999988887 66653322 33333 2 3344322258888888876
|
| >d1vpda2 c.2.1.6 (A:3-163) Hydroxyisobutyrate dehydrogenase {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Salmonella typhimurium [TaxId: 90371]
Probab=95.30 E-value=0.1 Score=38.30 Aligned_cols=87 Identities=14% Similarity=0.075 Sum_probs=61.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-h
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-K 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~ 233 (342)
+|.|.|. |.+|...++-+...|.+|++..+++++.+.+. +.+... .+ +..+.+++ .|++|-|+.. +
T Consensus 2 kIgiIGl-G~MG~~~A~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~-~~-----~~~e~~~~-----~d~ii~~v~~~~ 68 (161)
T d1vpda2 2 KVGFIGL-GIMGKPMSKNLLKAGYSLVVSDRNPEAIADVI-AAGAET-AS-----TAKAIAEQ-----CDVIITMLPNSP 68 (161)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CS-----SHHHHHHH-----CSEEEECCSSHH
T ss_pred EEEEEeh-hHHHHHHHHHHHHCCCeEEEEeCCcchhHHHH-Hhhhhh-cc-----cHHHHHhC-----CCeEEEEcCCHH
Confidence 4788896 99999888877778999999999999988888 777632 11 33334443 7999999875 4
Q ss_pred hHHHH-------HHhhhhCCEEEEEcee
Q 019332 234 MLDAV-------LLNMKIHGRIAVCGMI 254 (342)
Q Consensus 234 ~~~~~-------~~~l~~~G~~v~~g~~ 254 (342)
..... ...++++-.++..++.
T Consensus 69 ~v~~v~~~~~~~~~~~~~g~iiid~sT~ 96 (161)
T d1vpda2 69 HVKEVALGENGIIEGAKPGTVLIDMSSI 96 (161)
T ss_dssp HHHHHHHSTTCHHHHCCTTCEEEECSCC
T ss_pred HHHHHHhCCcchhhccCCCCEEEECCCC
Confidence 44443 3445566677776653
|
| >d1yl7a1 c.2.1.3 (A:2-105,A:215-245) Dihydrodipicolinate reductase {Mycobacterium tuberculosis [TaxId: 1773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Mycobacterium tuberculosis [TaxId: 1773]
Probab=95.24 E-value=0.16 Score=36.12 Aligned_cols=75 Identities=17% Similarity=0.134 Sum_probs=47.1
Q ss_pred EEEEecCCcHHHHHHHHHHHH-cCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKL-LGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~-~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|.|.|++|-+|.+.++.... .+.++.+.....+...... . .++|+++|+.-.+
T Consensus 1 kI~v~Ga~GrMG~~i~~~i~~~~~~~l~~~~d~~~~~~~~~-~------------------------~~~DvvIDFS~p~ 55 (135)
T d1yl7a1 1 RVGVLGAKGKVGATMVRAVAAADDLTLSAELDAGDPLSLLT-D------------------------GNTEVVIDFTHPD 55 (135)
T ss_dssp EEEEETTTSHHHHHHHHHHHHSTTSEEEEEECTTCCTHHHH-T------------------------TTCSEEEECCCTT
T ss_pred CEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecCCchhhhc-c------------------------ccCCEEEEcccHH
Confidence 589999999999998888754 4668776654322222111 1 2367777777766
Q ss_pred hHHHHHHhhhhCCEEEEEcee
Q 019332 234 MLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 234 ~~~~~~~~l~~~G~~v~~g~~ 254 (342)
.....++.+...|.=+.+|++
T Consensus 56 ~~~~~~~~~~~~~~~~ViGTT 76 (135)
T d1yl7a1 56 VVMGNLEFLIDNGIHAVVGTT 76 (135)
T ss_dssp THHHHHHHHHHTTCEEEECCC
T ss_pred HHHHHHHHHHhcCCCEEEecc
Confidence 555555555555554555654
|
| >d1ve3a1 c.66.1.43 (A:2-227) Hypothetical protein PH0226 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical protein PH0226 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=95.22 E-value=0.035 Score=43.20 Aligned_cols=94 Identities=19% Similarity=0.113 Sum_probs=61.3
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-eeEecCCchhHHHHHHHHCCCCcc
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-EAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
.+.++++||=+|. |.|..+..+++. |++|++++.|++-.+.+++. .+.. ..+..... ++ ....+.+|
T Consensus 34 ~l~~~~~ILDiGc--G~G~~~~~la~~-~~~v~giD~S~~~i~~ak~~~~~~~~~~~~~~~d~~-~l-----~~~~~~fD 104 (226)
T d1ve3a1 34 YMKKRGKVLDLAC--GVGGFSFLLEDY-GFEVVGVDISEDMIRKAREYAKSRESNVEFIVGDAR-KL-----SFEDKTFD 104 (226)
T ss_dssp SCCSCCEEEEETC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCCCEEEECCTT-SC-----CSCTTCEE
T ss_pred hcCCCCEEEEECC--CcchhhhhHhhh-hcccccccccccchhhhhhhhccccccccccccccc-cc-----cccCcCce
Confidence 4678899999995 557788888874 88999999999877777632 2321 22222111 11 01123689
Q ss_pred EEEeCCC-----h----hhHHHHHHhhhhCCEEEEE
Q 019332 225 IYFENVG-----G----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 225 ~vid~~g-----~----~~~~~~~~~l~~~G~~v~~ 251 (342)
+|+-... . ..+..+.+.|+|||+++..
T Consensus 105 ~I~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~lii~ 140 (226)
T d1ve3a1 105 YVIFIDSIVHFEPLELNQVFKEVRRVLKPSGKFIMY 140 (226)
T ss_dssp EEEEESCGGGCCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred EEEEecchhhCChhHHHHHHHHHHHHcCcCcEEEEE
Confidence 8875333 1 2467788999999998754
|
| >d1mx3a1 c.2.1.4 (A:126-318) Transcription corepressor CtbP {Human (Homo sapiens), Ctbp1 [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Transcription corepressor CtbP species: Human (Homo sapiens), Ctbp1 [TaxId: 9606]
Probab=95.18 E-value=0.038 Score=42.24 Aligned_cols=89 Identities=21% Similarity=0.195 Sum_probs=60.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|.|. |.||...+++++.+|++|++.++...+ +... ..+.... . ++.+.+++ .|+|.-+.
T Consensus 47 L~gktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~-~~~~-~~~~~~~----~--~l~~ll~~-----sD~i~~~~ 112 (193)
T d1mx3a1 47 IRGETLGIIGL-GRVGQAVALRAKAFGFNVLFYDPYLSD-GVER-ALGLQRV----S--TLQDLLFH-----SDCVTLHC 112 (193)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECTTSCT-THHH-HHTCEEC----S--SHHHHHHH-----CSEEEECC
T ss_pred eeCceEEEecc-ccccccceeeeeccccceeeccCcccc-cchh-hhccccc----c--chhhcccc-----CCEEEEee
Confidence 46789999996 999999999999999999999876543 2222 3444221 1 44444544 68876655
Q ss_pred Ch-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 231 GG-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
.. + .-...+..++++..+|.++-
T Consensus 113 plt~~T~~li~~~~l~~mk~~a~lIN~sR 141 (193)
T d1mx3a1 113 GLNEHNHHLINDFTVKQMRQGAFLVNTAR 141 (193)
T ss_dssp CCCTTCTTSBSHHHHTTSCTTEEEEECSC
T ss_pred cccccchhhhhHHHHhccCCCCeEEecCC
Confidence 53 2 12356778888888887754
|
| >d1v8ba1 c.2.1.4 (A:235-397) S-adenosylhomocystein hydrolase {Plasmodium falciparum, isolate 3D7 [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: S-adenosylhomocystein hydrolase species: Plasmodium falciparum, isolate 3D7 [TaxId: 5833]
Probab=95.14 E-value=0.099 Score=38.26 Aligned_cols=99 Identities=22% Similarity=0.189 Sum_probs=71.8
Q ss_pred Hhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCC
Q 019332 142 AGFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 142 ~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~ 220 (342)
.++.+. .-+-.|.+++|.| -|-+|.-.++-++.+|++|+++..++-+.-.+. --|. ++. ...+.++
T Consensus 11 d~i~r~t~~~laGk~vvV~G-YG~vGrG~A~~~rg~Ga~V~V~E~DPi~alqA~-mdGf-~v~------~~~~a~~---- 77 (163)
T d1v8ba1 11 DGLMRATDFLISGKIVVICG-YGDVGKGCASSMKGLGARVYITEIDPICAIQAV-MEGF-NVV------TLDEIVD---- 77 (163)
T ss_dssp HHHHHHHCCCCTTSEEEEEC-CSHHHHHHHHHHHHHTCEEEEECSCHHHHHHHH-TTTC-EEC------CHHHHTT----
T ss_pred HHHHHHhCceecCCEEEEec-ccccchhHHHHHHhCCCEEEEEecCchhhHHHH-hcCC-ccC------chhHccc----
Confidence 344343 3357899999999 499999999999999999999999986643333 2233 232 2222332
Q ss_pred CCccEEEeCCCh-h-hHHHHHHhhhhCCEEEEEcee
Q 019332 221 EGIDIYFENVGG-K-MLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 221 ~~~d~vid~~g~-~-~~~~~~~~l~~~G~~v~~g~~ 254 (342)
..|+++-+.|. . .-..-++.||.+..+...|..
T Consensus 78 -~aDi~vTaTGn~~vI~~~h~~~MKdgaIl~N~GHf 112 (163)
T d1v8ba1 78 -KGDFFITCTGNVDVIKLEHLLKMKNNAVVGNIGHF 112 (163)
T ss_dssp -TCSEEEECCSSSSSBCHHHHTTCCTTCEEEECSST
T ss_pred -cCcEEEEcCCCCccccHHHHHHhhCCeEEEecccc
Confidence 37999999998 3 345778899999999988864
|
| >d2b69a1 c.2.1.2 (A:4-315) UDP-glucuronate decarboxylase 1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-glucuronate decarboxylase 1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=95.08 E-value=0.0064 Score=50.64 Aligned_cols=32 Identities=19% Similarity=0.216 Sum_probs=29.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
.+|||+||+|-+|..++..+...|.+|+++++
T Consensus 2 KKIlVtG~sGfiG~~lv~~L~~~g~~V~~~d~ 33 (312)
T d2b69a1 2 KRILITGGAGFVGSHLTDKLMMDGHEVTVVDN 33 (312)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCcCEEEEEeC
Confidence 47999999999999999888888999999875
|
| >d2g5ca2 c.2.1.6 (A:30-200) Prephenate dehydrogenase TyrA {Aquifex aeolicus [TaxId: 63363]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Aquifex aeolicus [TaxId: 63363]
Probab=95.04 E-value=0.11 Score=38.49 Aligned_cols=88 Identities=14% Similarity=0.096 Sum_probs=59.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCC-CeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGF-DEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~-~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|+|.|. |-+|...+..++..|. +|++.+++++..+.++ +.+. +......+. ......|+++-|+.
T Consensus 3 ~I~IIG~-G~mG~sla~~L~~~g~~~~I~~~D~~~~~~~~a~-~~~~~~~~~~~~~~---------~~~~~~dlIila~p 71 (171)
T d2g5ca2 3 NVLIVGV-GFMGGSFAKSLRRSGFKGKIYGYDINPESISKAV-DLGIIDEGTTSIAK---------VEDFSPDFVMLSSP 71 (171)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCCSEEEEECSCHHHHHHHH-HTTSCSEEESCGGG---------GGGTCCSEEEECSC
T ss_pred EEEEEcc-CHHHHHHHHHHHhcCCCeEEEEEECChHHHHHHH-Hhhcchhhhhhhhh---------hhccccccccccCC
Confidence 6899996 9999998888888775 8999999999999998 7776 333221111 00113688887777
Q ss_pred hhh----HHHHHHhhhhCCEEEEEce
Q 019332 232 GKM----LDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~~~----~~~~~~~l~~~G~~v~~g~ 253 (342)
... +....+.++++..++.++.
T Consensus 72 ~~~~~~vl~~l~~~~~~~~ii~d~~s 97 (171)
T d2g5ca2 72 VRTFREIAKKLSYILSEDATVTDQGS 97 (171)
T ss_dssp HHHHHHHHHHHHHHSCTTCEEEECCS
T ss_pred chhhhhhhhhhhcccccccccccccc
Confidence 543 3334445555666666654
|
| >d1c1da1 c.2.1.7 (A:149-349) Phenylalanine dehydrogenase {Rhodococcus sp., M4 [TaxId: 1831]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Phenylalanine dehydrogenase species: Rhodococcus sp., M4 [TaxId: 1831]
Probab=94.98 E-value=0.032 Score=42.91 Aligned_cols=79 Identities=16% Similarity=0.274 Sum_probs=55.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|+|.|. |.+|..+++++...|++|++.+.+.++..... .+|... ++.. + +..-.+|+.+=|.
T Consensus 25 L~gk~v~IqG~-G~VG~~~A~~L~~~Gakvvv~d~d~~~~~~~~-~~g~~~-~~~~---~-------~~~~~~DI~iPcA 91 (201)
T d1c1da1 25 LDGLTVLVQGL-GAVGGSLASLAAEAGAQLLVADTDTERVAHAV-ALGHTA-VALE---D-------VLSTPCDVFAPCA 91 (201)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH-HTTCEE-CCGG---G-------GGGCCCSEEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEecchHHHHHHHH-hhcccc-cCcc---c-------cccccceeeeccc
Confidence 46789999996 99999999999999999999998888888777 777643 2221 1 1112478877666
Q ss_pred Ch-hhHHHHHHhh
Q 019332 231 GG-KMLDAVLLNM 242 (342)
Q Consensus 231 g~-~~~~~~~~~l 242 (342)
.+ ..-....+.+
T Consensus 92 ~~~~I~~~~a~~i 104 (201)
T d1c1da1 92 MGGVITTEVARTL 104 (201)
T ss_dssp CSCCBCHHHHHHC
T ss_pred ccccccHHHHhhh
Confidence 55 3333344444
|
| >d1wdka3 c.2.1.6 (A:311-496) Fatty oxidation complex alpha subunit, middle domain {Pseudomonas fragi [TaxId: 296]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Fatty oxidation complex alpha subunit, middle domain species: Pseudomonas fragi [TaxId: 296]
Probab=94.98 E-value=0.061 Score=40.79 Aligned_cols=40 Identities=13% Similarity=0.041 Sum_probs=34.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
.+|.|.|+ |.+|...+.++...|.+|+..+.+++..+...
T Consensus 5 ~~vaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~~~ 44 (186)
T d1wdka3 5 KQAAVLGA-GIMGGGIAYQSASKGTPILMKDINEHGIEQGL 44 (186)
T ss_dssp SSEEEECC-HHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH
T ss_pred CEEEEECc-CHHHHHHHHHHHhCCCeEEEEECCHHHHhhhh
Confidence 56999997 99999888888888999999999987665543
|
| >d1g8aa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.95 E-value=0.018 Score=45.45 Aligned_cols=100 Identities=17% Similarity=0.169 Sum_probs=65.5
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCC---CeeEecCCchhHHHHHHHHCCC
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGF---DEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
...++||++||=.|+ |.|..+..+++..|- +|++++.+++..+.+++.... ...+..+.. ..+.... ...
T Consensus 68 ~l~i~pG~~VLDlGa--GsG~~t~~la~~VG~~G~V~aVD~s~~~l~~a~~~a~~~~~~~~i~~d~~--~~~~~~~-~~~ 142 (227)
T d1g8aa_ 68 NFPIKPGKSVLYLGI--ASGTTASHVSDIVGWEGKIFGIEFSPRVLRELVPIVEERRNIVPILGDAT--KPEEYRA-LVP 142 (227)
T ss_dssp CCCCCTTCEEEEETT--TSTTHHHHHHHHHCTTSEEEEEESCHHHHHHHHHHHSSCTTEEEEECCTT--CGGGGTT-TCC
T ss_pred ccccCCCCEEEEecc--CCCHHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHHhcCCceEEEEECC--Ccccccc-ccc
Confidence 357899999999995 668889999998763 999999999888777633221 111212111 1111111 112
Q ss_pred CccEEEeCCCh-----hhHHHHHHhhhhCCEEEEE
Q 019332 222 GIDIYFENVGG-----KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 222 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~ 251 (342)
.+|+++..... ..+..+.+.|+++|+++..
T Consensus 143 ~vD~i~~d~~~~~~~~~~l~~~~~~LkpgG~lvi~ 177 (227)
T d1g8aa_ 143 KVDVIFEDVAQPTQAKILIDNAEVYLKRGGYGMIA 177 (227)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEE
T ss_pred ceEEEEEEccccchHHHHHHHHHHhcccCCeEEEE
Confidence 57877654432 2577788899999998764
|
| >d1qyda_ c.2.1.2 (A:) Pinoresinol-lariciresinol reductase {Giant arborvitae (Thuja plicata) [TaxId: 3316]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Pinoresinol-lariciresinol reductase species: Giant arborvitae (Thuja plicata) [TaxId: 3316]
Probab=94.90 E-value=0.061 Score=43.86 Aligned_cols=35 Identities=17% Similarity=0.138 Sum_probs=31.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
-.+|||+||+|-+|..++..+...|.+|++++|+.
T Consensus 3 k~KILVtGatG~iG~~l~~~L~~~G~~V~~~~R~~ 37 (312)
T d1qyda_ 3 KSRVLIVGGTGYIGKRIVNASISLGHPTYVLFRPE 37 (312)
T ss_dssp CCCEEEESTTSTTHHHHHHHHHHTTCCEEEECCSC
T ss_pred CCEEEEECCCCHHHHHHHHHHHhCCCEEEEEECCC
Confidence 35799999999999999998888899999999864
|
| >d2as0a2 c.66.1.51 (A:73-396) Hypothetical protein PH1915, middle and C-terminal domains {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein PH1915, middle and C-terminal domains species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.88 E-value=0.031 Score=46.62 Aligned_cols=101 Identities=20% Similarity=0.168 Sum_probs=63.0
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHH--CCCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRY--FPEG 222 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~--~~~~ 222 (342)
.+++|++||=.++ ++|..++.+|+. |+ +|++++.+++..+.+++ ..|....+..... +..+.+... .++.
T Consensus 142 ~~~~g~~VLDl~~--g~G~~si~~a~~-ga~~V~~vD~s~~al~~a~~N~~~ngl~~~~~~~~~-d~~~~~~~~~~~~~~ 217 (324)
T d2as0a2 142 WVQPGDRVLDVFT--YTGGFAIHAAIA-GADEVIGIDKSPRAIETAKENAKLNGVEDRMKFIVG-SAFEEMEKLQKKGEK 217 (324)
T ss_dssp GCCTTCEEEETTC--TTTHHHHHHHHT-TCSEEEEEESCHHHHHHHHHHHHHTTCGGGEEEEES-CHHHHHHHHHHTTCC
T ss_pred hcCCCCeeecccC--cccchhhhhhhc-CCcEEEeecCCHHHHHHHHHHHHHcCCCccceeeec-hhhhhhHHHHhccCC
Confidence 3678999987774 555556665654 66 89999999988777764 2354321222222 433444332 2237
Q ss_pred ccEEEe-CCC--h-------------hhHHHHHHhhhhCCEEEEEce
Q 019332 223 IDIYFE-NVG--G-------------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 223 ~d~vid-~~g--~-------------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
||+|+- .-. . ..+..++++|+|||.++.+..
T Consensus 218 fD~Vi~DpP~~~~~~~~~~~~~~~y~~l~~~a~~ll~pGG~lv~~s~ 264 (324)
T d2as0a2 218 FDIVVLDPPAFVQHEKDLKAGLRAYFNVNFAGLNLVKDGGILVTCSC 264 (324)
T ss_dssp EEEEEECCCCSCSSGGGHHHHHHHHHHHHHHHHTTEEEEEEEEEEEC
T ss_pred CCchhcCCccccCCHHHHHHHHHHHHHHHHHHHHHcCCCcEEEEEeC
Confidence 998864 221 1 145667889999999988755
|
| >d2pv7a2 c.2.1.6 (A:92-243) Prephenate dehydrogenase TyrA {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Prephenate dehydrogenase TyrA species: Haemophilus influenzae [TaxId: 727]
Probab=94.84 E-value=0.28 Score=35.38 Aligned_cols=78 Identities=12% Similarity=-0.003 Sum_probs=53.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC--CccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE--GIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~--~~d~vid~~g 231 (342)
.+|.|+|+.|.+|...+..++..|.+|.+.+++.+...... ..+++.++.........+.+.+.... .=.+++|+.+
T Consensus 10 ~kI~iIGg~G~mG~~la~~L~~~G~~V~~~d~~~~~~~~~~-~~~~~~v~~~~~~~~~~~v~~~~~~~~~~~~iiiD~~S 88 (152)
T d2pv7a2 10 HKIVIVGGYGKLGGLFARYLRASGYPISILDREDWAVAESI-LANADVVIVSVPINLTLETIERLKPYLTENMLLADLTS 88 (152)
T ss_dssp CCEEEETTTSHHHHHHHHHHHTTTCCEEEECTTCGGGHHHH-HTTCSEEEECSCGGGHHHHHHHHGGGCCTTSEEEECCS
T ss_pred CeEEEEcCCCHHHHHHHHHHHHcCCCcEecccccccccchh-hhhccccccccchhhheeeeecccccccCCceEEEecc
Confidence 47999997799999999999999999999998876655444 45666655444432344444444322 1247888877
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 89 v 89 (152)
T d2pv7a2 89 V 89 (152)
T ss_dssp C
T ss_pred c
Confidence 5
|
| >d1rpna_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.79 E-value=0.017 Score=47.86 Aligned_cols=74 Identities=11% Similarity=0.174 Sum_probs=46.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh--hHHHHHHHcCCCe-----eEecCCchhHHHHHHHHCCCCccEE
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD--KIDLLKNKFGFDE-----AFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~--~~~~~~~~~g~~~-----v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
.+|||+||+|-+|..++..+...|++|+++++... ..+.++ .++... ..|-.+...+.+.+... ..+++
T Consensus 1 k~vLItG~tGfiG~~l~~~Ll~~g~~V~~~~r~~~~~~~~~l~-~~~~~~~~~~~~~Dl~d~~~~~~~~~~~---~~~~~ 76 (321)
T d1rpna_ 1 RSALVTGITGQDGAYLAKLLLEKGYRVHGLVARRSSDTRWRLR-ELGIEGDIQYEDGDMADACSVQRAVIKA---QPQEV 76 (321)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCCSSCCCHHHH-HTTCGGGEEEEECCTTCHHHHHHHHHHH---CCSEE
T ss_pred CEEEEECCCCHHHHHHHHHHHHCcCEEEEEECCCCcccHHHHH-HhcccCCcEEEEccccChHHhhhhhccc---ccccc
Confidence 37999999999999999988888999999987542 234444 454421 12333331222223222 35677
Q ss_pred EeCCC
Q 019332 227 FENVG 231 (342)
Q Consensus 227 id~~g 231 (342)
+.+.+
T Consensus 77 ~~~a~ 81 (321)
T d1rpna_ 77 YNLAA 81 (321)
T ss_dssp EECCS
T ss_pred ccccc
Confidence 77665
|
| >d2c5aa1 c.2.1.2 (A:13-375) GDP-mannose-3', 5'-epimerase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose-3', 5'-epimerase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=94.78 E-value=0.043 Score=46.33 Aligned_cols=73 Identities=21% Similarity=0.253 Sum_probs=47.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
.+-+|||+||+|-+|...+..+...|.+|+++++...+.. .. ...... ..|.. +.. .+.+.. .++|.|+.+
T Consensus 14 ~nMKILVTGgsGfIGs~lv~~L~~~g~~V~~~d~~~~~~~-~~-~~~~~~~~~~D~~---~~~-~~~~~~-~~~d~Vih~ 86 (363)
T d2c5aa1 14 ENLKISITGAGGFIASHIARRLKHEGHYVIASDWKKNEHM-TE-DMFCDEFHLVDLR---VME-NCLKVT-EGVDHVFNL 86 (363)
T ss_dssp SCCEEEEETTTSHHHHHHHHHHHHTTCEEEEEESSCCSSS-CG-GGTCSEEEECCTT---SHH-HHHHHH-TTCSEEEEC
T ss_pred CCCEEEEECCCCHHHHHHHHHHHHCcCEEEEEeCCCccch-hh-hcccCcEEEeech---hHH-HHHHHh-hcCCeEeec
Confidence 5678999999999999999999999999999876543211 11 122222 22322 222 233322 258999998
Q ss_pred CC
Q 019332 230 VG 231 (342)
Q Consensus 230 ~g 231 (342)
++
T Consensus 87 a~ 88 (363)
T d2c5aa1 87 AA 88 (363)
T ss_dssp CC
T ss_pred cc
Confidence 75
|
| >d1nt2a_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Archaeoglobus fulgidus [TaxId: 2234]
Probab=94.75 E-value=0.02 Score=44.55 Aligned_cols=100 Identities=13% Similarity=0.124 Sum_probs=62.4
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHH---cCCCeeEecCCchhHHHHHHHHCCCCc
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNK---FGFDEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~---~g~~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
..++||++||=.|+ |.|..+..+++..+. +|++++.+++..+.+++. .+....+..+.. +. ... ......+
T Consensus 52 l~lkpg~~VLDlGc--G~G~~~~~la~~v~~g~V~gvDis~~~i~~a~~~a~~~~ni~~i~~d~~-~~-~~~-~~~~~~v 126 (209)
T d1nt2a_ 52 LKLRGDERVLYLGA--ASGTTVSHLADIVDEGIIYAVEYSAKPFEKLLELVRERNNIIPLLFDAS-KP-WKY-SGIVEKV 126 (209)
T ss_dssp CCCCSSCEEEEETC--TTSHHHHHHHHHTTTSEEEEECCCHHHHHHHHHHHHHCSSEEEECSCTT-CG-GGT-TTTCCCE
T ss_pred CCCCCCCEEEEeCC--cCCHHHHHHHHhccCCeEEEEeCCHHHHHHHHHHhhccCCceEEEeecc-Cc-ccc-ccccceE
Confidence 56899999999996 456678888887754 999999999877766532 232112211111 10 000 0111247
Q ss_pred cEEEeCCCh-----hhHHHHHHhhhhCCEEEEEc
Q 019332 224 DIYFENVGG-----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 224 d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g 252 (342)
|+++....- ..+..+.+.|+++|+++..-
T Consensus 127 d~v~~~~~~~~~~~~~l~~~~~~LkpgG~l~i~~ 160 (209)
T d1nt2a_ 127 DLIYQDIAQKNQIEILKANAEFFLKEKGEVVIMV 160 (209)
T ss_dssp EEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred EEEEecccChhhHHHHHHHHHHHhccCCeEEEEE
Confidence 777654321 25677888999999987653
|
| >d1ks9a2 c.2.1.6 (A:1-167) Ketopantoate reductase PanE {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Ketopantoate reductase PanE species: Escherichia coli [TaxId: 562]
Probab=94.73 E-value=0.012 Score=43.68 Aligned_cols=86 Identities=15% Similarity=0.120 Sum_probs=55.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-----eeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-----EAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-----~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+|+|+|+ |.+|.+....+...|.+|..+++++++..... ..+.+ ..+.... .+.+. .+|++|-+
T Consensus 2 kI~IiGa-G~iG~~~a~~L~~~G~~V~~~~r~~~~~~~~~-~~~~~~~~~~~~~~~~~----~~~~~-----~~D~iii~ 70 (167)
T d1ks9a2 2 KITVLGC-GALGQLWLTALCKQGHEVQGWLRVPQPYCSVN-LVETDGSIFNESLTAND----PDFLA-----TSDLLLVT 70 (167)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSEEEEE-EECTTSCEEEEEEEESC----HHHHH-----TCSEEEEC
T ss_pred EEEEECc-CHHHHHHHHHHHHCCCceEEEEcCHHHhhhhc-cccCCccccccccccch----hhhhc-----ccceEEEe
Confidence 6899997 99999888888888999999999886543322 22321 1111111 22222 48999999
Q ss_pred CChhhHHHHHHhh----hhCCEEEEE
Q 019332 230 VGGKMLDAVLLNM----KIHGRIAVC 251 (342)
Q Consensus 230 ~g~~~~~~~~~~l----~~~G~~v~~ 251 (342)
+-......+.+.+ .++..++.+
T Consensus 71 vka~~~~~~~~~l~~~~~~~~~Iv~~ 96 (167)
T d1ks9a2 71 LKAWQVSDAVKSLASTLPVTTPILLI 96 (167)
T ss_dssp SCGGGHHHHHHHHHTTSCTTSCEEEE
T ss_pred ecccchHHHHHhhccccCcccEEeec
Confidence 9986555555544 445556554
|
| >d1wzna1 c.66.1.43 (A:1-251) Hypothetical methyltransferase PH1305 {Archaeon Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Hypothetical methyltransferase PH1305 species: Archaeon Pyrococcus horikoshii [TaxId: 53953]
Probab=94.71 E-value=0.029 Score=44.68 Aligned_cols=94 Identities=16% Similarity=0.101 Sum_probs=62.0
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-eeEecCCchhHHHHHHHHCC-
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-EAFNYKEEPDLNEALKRYFP- 220 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~i~~~~~- 220 (342)
......++.+||=.|. |.|..+..+++ .|++|++++.|++-.+.+++++ +.. .++..+ +.++..
T Consensus 35 ~~~~~~~~~~iLDiGc--GtG~~~~~l~~-~~~~v~gvD~s~~mi~~a~~~~~~~~~~i~~~~~d--------~~~l~~~ 103 (251)
T d1wzna1 35 KEDAKREVRRVLDLAC--GTGIPTLELAE-RGYEVVGLDLHEEMLRVARRKAKERNLKIEFLQGD--------VLEIAFK 103 (251)
T ss_dssp HHTCSSCCCEEEEETC--TTCHHHHHHHH-TTCEEEEEESCHHHHHHHHHHHHHTTCCCEEEESC--------GGGCCCC
T ss_pred HHhcCCCCCEEEEeCC--CCCccchhhcc-cceEEEEEeeccccccccccccccccccchheehh--------hhhcccc
Confidence 3345667789999995 45888888877 5889999999998777766432 321 222221 122222
Q ss_pred CCccEEEeCCCh----------hhHHHHHHhhhhCCEEEE
Q 019332 221 EGIDIYFENVGG----------KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 221 ~~~d~vid~~g~----------~~~~~~~~~l~~~G~~v~ 250 (342)
+.+|.|+...+. ..+..+.++|+|+|.++.
T Consensus 104 ~~fD~I~~~~~~~~~~~~~~~~~~L~~~~~~LkpgG~lii 143 (251)
T d1wzna1 104 NEFDAVTMFFSTIMYFDEEDLRKLFSKVAEALKPGGVFIT 143 (251)
T ss_dssp SCEEEEEECSSGGGGSCHHHHHHHHHHHHHHEEEEEEEEE
T ss_pred cccchHhhhhhhhhcCChHHHHHHHHHHHHHcCCCcEEEE
Confidence 369998865432 246678889999999875
|
| >d1gdha1 c.2.1.4 (A:101-291) D-glycerate dehydrogenase {Hyphomicrobium methylovorum [TaxId: 84]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-glycerate dehydrogenase species: Hyphomicrobium methylovorum [TaxId: 84]
Probab=94.68 E-value=0.074 Score=40.48 Aligned_cols=89 Identities=10% Similarity=0.033 Sum_probs=60.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.|.++.|+|. |.+|...+++++.+|.+|+..++......... ..+. ..+ + ++.+.+++ .|+|..+..
T Consensus 46 ~g~tvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~---~~~-~--~l~~ll~~-----sD~v~l~~p 112 (191)
T d1gdha1 46 DNKTLGIYGF-GSIGQALAKRAQGFDMDIDYFDTHRASSSDEA-SYQA---TFH-D--SLDSLLSV-----SQFFSLNAP 112 (191)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSCCCHHHHH-HHTC---EEC-S--SHHHHHHH-----CSEEEECCC
T ss_pred cccceEEeec-ccchHHHHHHHHhhccccccccccccccchhh-cccc---ccc-C--CHHHHHhh-----CCeEEecCC
Confidence 4789999996 99999999999999999999887554333322 2222 111 1 44455554 688876554
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
- + .-...++.++++..+|.++-
T Consensus 113 lt~~T~~li~~~~l~~mk~~a~lIN~sR 140 (191)
T d1gdha1 113 STPETRYFFNKATIKSLPQGAIVVNTAR 140 (191)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred CCchHhheecHHHhhCcCCccEEEecCC
Confidence 3 2 12467778888888888764
|
| >d1onfa2 c.3.1.5 (A:154-270) Glutathione reductase {Plasmodium falciparum [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Plasmodium falciparum [TaxId: 5833]
Probab=94.67 E-value=0.028 Score=39.19 Aligned_cols=38 Identities=18% Similarity=0.059 Sum_probs=32.9
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+++...+|+|.|| |.+|+-++..++.+|.+|+.+.+++
T Consensus 18 ~l~~p~~v~IiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 55 (117)
T d1onfa2 18 NIKESKKIGIVGS-GYIAVELINVIKRLGIDSYIFARGN 55 (117)
T ss_dssp TCCCCSEEEEECC-SHHHHHHHHHHHTTTCEEEEECSSS
T ss_pred ccCCCCEEEEECC-chHHHHHHHHHHhccccceeeehhc
Confidence 3455689999997 9999999999999999999999764
|
| >d1xgka_ c.2.1.2 (A:) Negative transcriptional regulator NmrA {Aspergillus nidulans [TaxId: 162425]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Negative transcriptional regulator NmrA species: Aspergillus nidulans [TaxId: 162425]
Probab=94.64 E-value=0.059 Score=45.14 Aligned_cols=38 Identities=21% Similarity=0.206 Sum_probs=33.8
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
...+|||+||+|.+|..++..+...|.+|++++|+.++
T Consensus 2 ~kktIlVtGatG~iG~~lv~~Ll~~G~~V~~l~R~~~~ 39 (350)
T d1xgka_ 2 QKKTIAVVGATGRQGASLIRVAAAVGHHVRAQVHSLKG 39 (350)
T ss_dssp CCCCEEEESTTSHHHHHHHHHHHHTTCCEEEEESCSCS
T ss_pred CCCEEEEECCChHHHHHHHHHHHhCCCeEEEEECCcch
Confidence 45689999999999999999998899999999987654
|
| >d1b7go1 c.2.1.3 (O:1-138,O:301-340) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Sulfolobus solfataricus [TaxId: 2287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Sulfolobus solfataricus [TaxId: 2287]
Probab=94.63 E-value=0.096 Score=39.28 Aligned_cols=94 Identities=12% Similarity=0.096 Sum_probs=57.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCh--hhHHHHHHHcCCCeeEecCCch-----------hHHHHHHHHCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSK--DKIDLLKNKFGFDEAFNYKEEP-----------DLNEALKRYFP 220 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~--~~~~~~~~~~g~~~v~~~~~~~-----------~~~~~i~~~~~ 220 (342)
+|.|.|- |-+|..+++.+... +.+++++.... .....+. ..+........... ++....
T Consensus 3 KVaINGf-GRIGR~v~Ral~~~~dievVaInd~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~i~v~g~~~~~~----- 75 (178)
T d1b7go1 3 NVAVNGY-GTIGKRVADAIIKQPDMKLVGVAKTSPNYEAFIAH-RRGIRIYVPQQSIKKFEESGIPVAGTVEDLI----- 75 (178)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCTTEEEEEEECSSCSHHHHHHH-HTTCCEECCGGGHHHHHTTTCCCCCCHHHHH-----
T ss_pred EEEEECC-CHHHHHHHHHHHhCCCCEEEEEECCCCcHHHHHhc-ccCcceeccCccceeccccceecCCchhhhh-----
Confidence 6899995 99999999998765 45888876432 2333333 33332111111000 111111
Q ss_pred CCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceec
Q 019332 221 EGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 221 ~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
.++|+|+||.|. ...+.+..+++.+-+++..+...
T Consensus 76 ~~vDiViecTG~f~~~e~a~~hl~~G~KvIi~~~~~ 111 (178)
T d1b7go1 76 KTSDIVVDTTPNGVGAQYKPIYLQLQRNAIFQGGEK 111 (178)
T ss_dssp HHCSEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred hcCCEEEECCCCcCCHHHHHHHHHcCCEEEEECCCC
Confidence 148999999998 66677778888877888766543
|
| >d1cf2o1 c.2.1.3 (O:1-138,O:304-336) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Archaeon Methanothermus fervidus [TaxId: 2180]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Archaeon Methanothermus fervidus [TaxId: 2180]
Probab=94.61 E-value=0.2 Score=37.22 Aligned_cols=98 Identities=15% Similarity=0.125 Sum_probs=60.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCC--hhhHHHHHHHcCCCeeEecCCch-hHHH-------HHHHHCCCCc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGS--KDKIDLLKNKFGFDEAFNYKEEP-DLNE-------ALKRYFPEGI 223 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s--~~~~~~~~~~~g~~~v~~~~~~~-~~~~-------~i~~~~~~~~ 223 (342)
+|.|.|- |-||..+++.+...+ .+++++... ......+. +++.+......+.. .+.+ .+.+.. .++
T Consensus 3 ~VgINGf-GRIGR~v~R~l~~~~di~vvaInd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~v~g~~~~~~-~~v 79 (171)
T d1cf2o1 3 AVAINGY-GTVGKRVADAIAQQDDMKVIGVSKTRPDFEARMAL-KKGYDLYVAIPERVKLFEKAGIEVAGTVDDML-DEA 79 (171)
T ss_dssp EEEEECC-SHHHHHHHHHHHTSSSEEEEEEEESSCSHHHHHHH-HTTCCEEESSGGGHHHHHHTTCCCCEEHHHHH-HTC
T ss_pred EEEEEcC-cHHHHHHHHHHHhCCCceEEEEecCCcHHHHHHHH-hcCCceEecccccceeecccCcccCCChhHhh-cCC
Confidence 6899995 999999999886655 477766532 23334554 55554322111110 0000 011111 159
Q ss_pred cEEEeCCCh-hhHHHHHHhhhhCCEEEEEceec
Q 019332 224 DIYFENVGG-KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 224 d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|+|+||.|. ...+.+...+..+-++|..+.+.
T Consensus 80 DvViEcTG~f~~~~~~~~hl~~G~K~vi~~~~~ 112 (171)
T d1cf2o1 80 DIVIDCTPEGIGAKNLKMYKEKGIKAIFQGGEK 112 (171)
T ss_dssp SEEEECCSTTHHHHHHHHHHHTTCEEEECTTSC
T ss_pred CEEEEccCCCCCHHHHHHHHHcCCCEEEECCCC
Confidence 999999998 66777888898888888776543
|
| >d1n1ea2 c.2.1.6 (A:9-197) Glycerol-3- phosphate dehydrogenase {Trypanosome (Leishmania mexicana) [TaxId: 5665]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Trypanosome (Leishmania mexicana) [TaxId: 5665]
Probab=94.58 E-value=0.048 Score=41.53 Aligned_cols=81 Identities=12% Similarity=0.153 Sum_probs=57.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC------ee----EecCCchhHHHHHHHHCCCCc
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD------EA----FNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~------~v----~~~~~~~~~~~~i~~~~~~~~ 223 (342)
.+|.|.|+ |..|.+.+.++...|.+|....++++..+.+. +-+.. .. +.... ++.+.++ +.
T Consensus 8 ~KI~ViGa-G~wGtAlA~~La~~g~~V~l~~r~~~~~~~i~-~~~~n~~yl~~~~l~~~i~~t~--~l~~a~~-----~a 78 (189)
T d1n1ea2 8 NKAVVFGS-GAFGTALAMVLSKKCREVCVWHMNEEEVRLVN-EKRENVLFLKGVQLASNITFTS--DVEKAYN-----GA 78 (189)
T ss_dssp EEEEEECC-SHHHHHHHHHHHTTEEEEEEECSCHHHHHHHH-HHTBCTTTSTTCBCCTTEEEES--CHHHHHT-----TC
T ss_pred ceEEEECC-CHHHHHHHHHHHHcCCeEEEEEecHHHHHHHh-hcccccccccccccccccccch--hhhhccC-----CC
Confidence 46999997 99999999888888889999999998888776 33210 00 11111 3334433 37
Q ss_pred cEEEeCCChhhHHHHHHhhh
Q 019332 224 DIYFENVGGKMLDAVLLNMK 243 (342)
Q Consensus 224 d~vid~~g~~~~~~~~~~l~ 243 (342)
|+++-++.+..+...++.++
T Consensus 79 d~iiiavPs~~~~~~~~~~~ 98 (189)
T d1n1ea2 79 EIILFVIPTQFLRGFFEKSG 98 (189)
T ss_dssp SCEEECSCHHHHHHHHHHHC
T ss_pred CEEEEcCcHHHHHHHHHHHH
Confidence 99999999887777766543
|
| >d1vm6a3 c.2.1.3 (A:1-96,A:183-214) Dihydrodipicolinate reductase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Thermotoga maritima [TaxId: 2336]
Probab=94.53 E-value=0.045 Score=38.73 Aligned_cols=73 Identities=18% Similarity=0.073 Sum_probs=50.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
+|.|+|++|-+|++..++++..+.+++.....+.. ..+ ..+|+++|+...+.
T Consensus 2 ki~i~G~~GrMG~~i~~~~~~~~~~l~~~id~~~~-----------~~~-----------------~~~DVvIDFS~p~~ 53 (128)
T d1vm6a3 2 KYGIVGYSGRMGQEIQKVFSEKGHELVLKVDVNGV-----------EEL-----------------DSPDVVIDFSSPEA 53 (128)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTTCEEEEEEETTEE-----------EEC-----------------SCCSEEEECSCGGG
T ss_pred EEEEECCCCHHHHHHHHHHhcCCCeEEEEECCCcH-----------HHh-----------------ccCCEEEEecCHHH
Confidence 58999999999999999999888877655422110 000 13788888888876
Q ss_pred HHHHHHhhhhCCEEEEEceec
Q 019332 235 LDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 235 ~~~~~~~l~~~G~~v~~g~~~ 255 (342)
....++.....+.=+.+|+++
T Consensus 54 ~~~~l~~~~~~~~p~ViGTTG 74 (128)
T d1vm6a3 54 LPKTVDLCKKYRAGLVLGTTA 74 (128)
T ss_dssp HHHHHHHHHHHTCEEEECCCS
T ss_pred HHHHHHHHHhcCCCEEEEcCC
Confidence 666666655555555666643
|
| >d1g8sa_ c.66.1.3 (A:) Fibrillarin homologue {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Fibrillarin homologue domain: Fibrillarin homologue species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.43 E-value=0.038 Score=43.57 Aligned_cols=102 Identities=13% Similarity=0.089 Sum_probs=63.3
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCC---CeeEecCCchhHHHHHHHHCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGF---DEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~---~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
+...+++|++||=.|+ |.|..+..+++... .+|++++.|++-.+.+++.... ...+..... . ........ .
T Consensus 68 ~~l~ikpG~~VLDlGc--GsG~~~~~la~~~~~g~V~aVDiS~~~i~~a~~~a~~~~ni~~i~~d~~-~-~~~~~~~~-~ 142 (230)
T d1g8sa_ 68 KVMPIKRDSKILYLGA--SAGTTPSHVADIADKGIVYAIEYAPRIMRELLDACAERENIIPILGDAN-K-PQEYANIV-E 142 (230)
T ss_dssp CCCCCCTTCEEEEESC--CSSHHHHHHHHHTTTSEEEEEESCHHHHHHHHHHTTTCTTEEEEECCTT-C-GGGGTTTC-C
T ss_pred HhCCCCCCCEEEEeCE--EcCHHHHHHHHhCCCCEEEEEeCcHHHHHHHHHHHhhhcccceEEEeec-c-Cccccccc-c
Confidence 3457899999999996 55777888888653 4999999999887777632111 112221111 1 11111111 1
Q ss_pred CccEEEeCCCh-----hhHHHHHHhhhhCCEEEEEc
Q 019332 222 GIDIYFENVGG-----KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 222 ~~d~vid~~g~-----~~~~~~~~~l~~~G~~v~~g 252 (342)
.+|+++..... ..+..+.+.|+++|+++..-
T Consensus 143 ~v~~i~~~~~~~~~~~~~l~~~~r~LKpgG~~~i~~ 178 (230)
T d1g8sa_ 143 KVDVIYEDVAQPNQAEILIKNAKWFLKKGGYGMIAI 178 (230)
T ss_dssp CEEEEEECCCSTTHHHHHHHHHHHHEEEEEEEEEEE
T ss_pred eeEEeeccccchHHHHHHHHHHHHhcccCceEEEEe
Confidence 46666665542 24677888999999987653
|
| >d1p91a_ c.66.1.33 (A:) rRNA methyltransferase RlmA {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: rRNA methyltransferase RlmA domain: rRNA methyltransferase RlmA species: Escherichia coli [TaxId: 562]
Probab=94.39 E-value=0.074 Score=42.87 Aligned_cols=96 Identities=14% Similarity=0.058 Sum_probs=65.9
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
..++.+||=.| .|.|..+..+++.. ++++++++.|++-.+.+++...-...+..+.. ++ ....+.+|+|+.
T Consensus 82 ~~~~~~iLDiG--cG~G~~~~~l~~~~~~~~~~giD~s~~~~~~a~~~~~~~~~~~~d~~-~l-----~~~~~sfD~v~~ 153 (268)
T d1p91a_ 82 DDKATAVLDIG--CGEGYYTHAFADALPEITTFGLDVSKVAIKAAAKRYPQVTFCVASSH-RL-----PFSDTSMDAIIR 153 (268)
T ss_dssp CTTCCEEEEET--CTTSTTHHHHHHTCTTSEEEEEESCHHHHHHHHHHCTTSEEEECCTT-SC-----SBCTTCEEEEEE
T ss_pred CCCCCEEEEeC--CCCcHHHHHHHHHCCCCEEEEecchHhhhhhhhcccccccceeeehh-hc-----cCCCCCEEEEee
Confidence 45677898888 46678788888765 67999999999888888733322222221111 11 111236999997
Q ss_pred CCChhhHHHHHHhhhhCCEEEEEce
Q 019332 229 NVGGKMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G~~v~~g~ 253 (342)
...-..+.++.+.|+|+|.++....
T Consensus 154 ~~~~~~~~e~~rvLkpgG~l~~~~p 178 (268)
T d1p91a_ 154 IYAPCKAEELARVVKPGGWVITATP 178 (268)
T ss_dssp ESCCCCHHHHHHHEEEEEEEEEEEE
T ss_pred cCCHHHHHHHHHHhCCCcEEEEEee
Confidence 6665778899999999999987643
|
| >d2a35a1 c.2.1.2 (A:4-215) Hypothetical protein PA4017 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Hypothetical protein PA4017 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.38 E-value=0.033 Score=43.09 Aligned_cols=68 Identities=18% Similarity=0.118 Sum_probs=43.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+|||+||+|-+|...++.+...|. +|++..+++.. ...-+..... ++.+. .+...+.+|.|++|+|
T Consensus 3 KkIlItGatG~iG~~lv~~L~~~~~~~~v~~~~r~~~~---------~~~~~~~~~~-d~~~~-~~~~~~~~d~vi~~~g 71 (212)
T d2a35a1 3 KRVLLAGATGLTGEHLLDRILSEPTLAKVIAPARKALA---------EHPRLDNPVG-PLAEL-LPQLDGSIDTAFCCLG 71 (212)
T ss_dssp CEEEEECTTSHHHHHHHHHHHHCTTCCEEECCBSSCCC---------CCTTEECCBS-CHHHH-GGGCCSCCSEEEECCC
T ss_pred CEEEEECCCcHHHHHHHHHHHhCCCeEEEEEEeCCchh---------hccccccccc-chhhh-hhccccchheeeeeee
Confidence 5899999999999999998887786 67766654321 1011222222 33333 3333346899999987
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
.
T Consensus 72 ~ 72 (212)
T d2a35a1 72 T 72 (212)
T ss_dssp C
T ss_pred e
Confidence 5
|
| >d1nvta1 c.2.1.7 (A:111-287) Shikimate 5-dehydrogenase AroE {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Shikimate 5-dehydrogenase AroE species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=94.33 E-value=0.055 Score=40.65 Aligned_cols=53 Identities=13% Similarity=0.119 Sum_probs=38.2
Q ss_pred hhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc
Q 019332 143 GFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF 197 (342)
Q Consensus 143 al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~ 197 (342)
+|.+...--+|.+|||.|+ ||++.+++..+...| +|++..|+.+|.+.+.+.+
T Consensus 8 ~l~~~~~~~~~k~vlIlGa-GG~arai~~aL~~~~-~i~I~nR~~~ka~~l~~~~ 60 (177)
T d1nvta1 8 ALEEEIGRVKDKNIVIYGA-GGAARAVAFELAKDN-NIIIANRTVEKAEALAKEI 60 (177)
T ss_dssp HHHHHHCCCCSCEEEEECC-SHHHHHHHHHHTSSS-EEEEECSSHHHHHHHHHHH
T ss_pred HHHHhCCCcCCCEEEEECC-cHHHHHHHHHHcccc-ceeeehhhhhHHHHHHHHH
Confidence 4433333346789999997 999998877665545 9999999998877665333
|
| >d1zh8a1 c.2.1.3 (A:4-131,A:276-328) Hypothetical protein TM0312 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM0312 species: Thermotoga maritima [TaxId: 2336]
Probab=94.27 E-value=0.7 Score=34.24 Aligned_cols=138 Identities=14% Similarity=0.055 Sum_probs=76.3
Q ss_pred EEEEecCCcHHHHH-HHHHHHHc-C-CEEEEEe-CChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 155 CVFISAASGAVGQL-VGQFAKLL-G-CYVVGSA-GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 155 ~vlI~ga~g~vG~~-ai~la~~~-g-a~Vi~~~-~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
+|.|.|. |.+|.- .+...+.. + .++++++ +++++.+.+.++++...+++ ++.+.+.+ ..+|.|+-|.
T Consensus 5 rigiIG~-G~~g~~~h~~~l~~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~~~~-----~~~ell~~---~~id~v~I~t 75 (181)
T d1zh8a1 5 RLGIVGC-GIAARELHLPALKNLSHLFEITAVTSRTRSHAEEFAKMVGNPAVFD-----SYEELLES---GLVDAVDLTL 75 (181)
T ss_dssp EEEEECC-SHHHHHTHHHHHHTTTTTEEEEEEECSSHHHHHHHHHHHSSCEEES-----CHHHHHHS---SCCSEEEECC
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCCeEEEEEEeccHhhhhhhhccccccceee-----eeeccccc---cccceeeccc
Confidence 6889996 888864 45555554 3 4777665 45566665554777655432 44444432 2599999888
Q ss_pred Ch-hhHHHHHHhhhhCCEEEEEceeccccCCCCccc-cchHHHH-hcceee-ecceecccccchHHHHHHHHHHHHcCCc
Q 019332 231 GG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGV-HNLMYLV-TKRVRM-EGFLVRDYYHLYPKFLEMIIPHIKEGKI 306 (342)
Q Consensus 231 g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~-~~~~~~~-~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 306 (342)
.. ...+.+..++..+-.++ +.-+-.. .... ....... .++..+ .++... ...+...+..+.+++.+|.+
T Consensus 76 p~~~h~~~~~~al~~gk~V~-~EKPl~~----~~~e~~~l~~~~~~~~~~~~v~~~~R--~~~~~~~~~~~~~~i~~G~i 148 (181)
T d1zh8a1 76 PVELNLPFIEKALRKGVHVI-CEKPIST----DVETGKKVVELSEKSEKTVYIAENFR--ENSYQKEFEDFYQVVAEGKP 148 (181)
T ss_dssp CGGGHHHHHHHHHHTTCEEE-EESSSSS----SHHHHHHHHHHHHHCSSCEEEECGGG--CCHHHHHHHHHHHHHHSCCC
T ss_pred cccccccccccccccchhhh-cCCCCcC----CHHHHHHHHHHHHHhCCeEEEEeecc--ccccCHHHHHHHHHHHCCCC
Confidence 87 56777777777765544 3322111 1111 1111121 122222 221110 12345667888889999887
Q ss_pred ee
Q 019332 307 VY 308 (342)
Q Consensus 307 ~~ 308 (342)
..
T Consensus 149 g~ 150 (181)
T d1zh8a1 149 ND 150 (181)
T ss_dssp CS
T ss_pred cc
Confidence 53
|
| >d2gz1a1 c.2.1.3 (A:2-127,A:330-357) Aspartate beta-semialdehyde dehydrogenase {Streptococcus pneumoniae [TaxId: 1313]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Streptococcus pneumoniae [TaxId: 1313]
Probab=94.18 E-value=0.15 Score=37.12 Aligned_cols=146 Identities=13% Similarity=0.023 Sum_probs=74.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC---EEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC---YVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga---~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
|-+|.|.||+|-+|.-.++++..+.. ++...+++......+ ...... ..+..+. + ....|+++
T Consensus 1 g~kVaIvGATGyvG~eLirlL~~H~fp~~~l~~~~s~~s~G~~~--~~~~~~~~~~~~~~~-~---------~~~~d~~f 68 (154)
T d2gz1a1 1 GYTVAVVGATGAVGAQMIKMLEESTLPIDKIRYLASARSAGKSL--KFKDQDITIEETTET-A---------FEGVDIAL 68 (154)
T ss_dssp CEEEEEETTTSHHHHHHHHHHHTCCSCEEEEEEEECGGGTTCEE--EETTEEEEEEECCTT-T---------TTTCSEEE
T ss_pred CCEEEEECCCcHHHHHHHHHHHcCCCCceEEEEecccccccccc--cccCCcccccccchh-h---------hhhhhhhh
Confidence 45799999999999999999987743 555555432211100 011111 1111111 1 12589999
Q ss_pred eCCCh-hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHHHhcceeeecceecccccchHHHHHHHHHHHHcCCc
Q 019332 228 ENVGG-KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYLVTKRVRMEGFLVRDYYHLYPKFLEMIIPHIKEGKI 306 (342)
Q Consensus 228 d~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~ 306 (342)
-+.+. ......-+.+..+.+++..+...- ..... .....+.....+.-....+.. +.=+...+..+..+++.|.+
T Consensus 69 ~~~~~~~s~~~~~~~~~~~~~VIDlSsdfR--~~~~~-~~~~pe~n~~~~~~~~~iIAn-PgC~tt~i~~l~PL~~~~li 144 (154)
T d2gz1a1 69 FSAGSSTSAKYAPYAVKAGVVVVDNTSYFR--QNPDV-PLVVPEVNAHALDAHNGIIAC-PNAAWNSVQIAETLHERGLV 144 (154)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECSSTTT--TCTTS-CBCCHHHHGGGGGGCCSEEEC-CCTHHHHHHHHHHHHHTTCC
T ss_pred hccCccchhhHHhhhccccceehhcChhhh--ccCCc-ccccchhhHHHhcCcCceEEC-CCCHHHHHHHHHHHHHhcCC
Confidence 99888 455555566777778888765321 11111 111111111111000000111 22223334456788889999
Q ss_pred eeeeeeee
Q 019332 307 VYVEDMAE 314 (342)
Q Consensus 307 ~~~~~~~~ 314 (342)
++....+|
T Consensus 145 k~~~~~~~ 152 (154)
T d2gz1a1 145 RPTAELKF 152 (154)
T ss_dssp SCCSSCCS
T ss_pred Cccceeee
Confidence 88765544
|
| >d2naca1 c.2.1.4 (A:148-335) Formate dehydrogenase {Pseudomonas sp., strain 101 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Formate dehydrogenase species: Pseudomonas sp., strain 101 [TaxId: 306]
Probab=94.18 E-value=0.068 Score=40.57 Aligned_cols=89 Identities=15% Similarity=-0.010 Sum_probs=60.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.++.|.|. |.+|...+++++.+|.+|+..++........+ ..+... .. ++.+.++ ..|+|.-+..
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~~~~~-~~~~~~---~~---~l~~~l~-----~sD~v~~~~p 109 (188)
T d2naca1 43 EAMHVGTVAA-GRIGLAVLRRLAPFDVHLHYTDRHRLPESVEK-ELNLTW---HA---TREDMYP-----VCDVVTLNCP 109 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHGGGTCEEEEECSSCCCHHHHH-HHTCEE---CS---SHHHHGG-----GCSEEEECSC
T ss_pred cccceeeccc-cccchhhhhhhhccCceEEEEeeccccccccc-cccccc---cC---CHHHHHH-----hccchhhccc
Confidence 5789999996 99999999999999999999997655444444 444322 11 3333332 2688766554
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
- + .-...+..|+++..+|.++.
T Consensus 110 lt~~T~~li~~~~l~~mk~ga~lIN~aR 137 (188)
T d2naca1 110 LHPETEHMINDETLKLFKRGAYIVNTAR 137 (188)
T ss_dssp CCTTTTTCBSHHHHTTSCTTEEEEECSC
T ss_pred ccccchhhhHHHHHHhCCCCCEEEecCc
Confidence 3 2 23466778888888777654
|
| >d3cuma2 c.2.1.6 (A:1-162) Hydroxyisobutyrate dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hydroxyisobutyrate dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=94.17 E-value=0.21 Score=36.60 Aligned_cols=86 Identities=14% Similarity=0.182 Sum_probs=57.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-h
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG-K 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~-~ 233 (342)
+|.+.|. |-+|...+.-+...|.+|++..+++++.+.+. +.+.... . +..+.++ ..|+++-|+.. .
T Consensus 3 kIg~IGl-G~MG~~iA~~L~~~g~~v~~~d~~~~~~~~~~-~~~~~~~---~---~~~e~~~-----~~diii~~v~~~~ 69 (162)
T d3cuma2 3 QIAFIGL-GHMGAPMATNLLKAGYLLNVFDLVQSAVDGLV-AAGASAA---R---SARDAVQ-----GADVVISMLPASQ 69 (162)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSSHHHHHHHH-HTTCEEC---S---SHHHHHT-----SCSEEEECCSCHH
T ss_pred EEEEEEE-HHHHHHHHHHHHHCCCeEEEEECchhhhhhhh-hhhcccc---c---hhhhhcc-----ccCeeeecccchh
Confidence 6889995 99999877777778999999999999988887 7765321 1 2233332 26788777776 3
Q ss_pred hHHHH-------HHhhhhCCEEEEEce
Q 019332 234 MLDAV-------LLNMKIHGRIAVCGM 253 (342)
Q Consensus 234 ~~~~~-------~~~l~~~G~~v~~g~ 253 (342)
..... ...+.++-.++..++
T Consensus 70 ~~~~v~~~~~~~~~~l~~g~iiid~st 96 (162)
T d3cuma2 70 HVEGLYLDDDGLLAHIAPGTLVLECST 96 (162)
T ss_dssp HHHHHHHSTTCHHHHSCTTCEEEECSC
T ss_pred hHHHHHhccccccccCCCCCEEEECCC
Confidence 33333 233455556666554
|
| >d1qp8a1 c.2.1.4 (A:83-263) Putative formate dehydrogenase {Archaeon Pyrobaculum aerophilum [TaxId: 13773]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Putative formate dehydrogenase species: Archaeon Pyrobaculum aerophilum [TaxId: 13773]
Probab=94.16 E-value=0.054 Score=40.89 Aligned_cols=84 Identities=25% Similarity=0.209 Sum_probs=58.9
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENV 230 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~ 230 (342)
-.|.+|.|+|. |.+|...+++++.+|++|++..++..+ +..... + ++.+.++ ..|+|+.+.
T Consensus 40 l~gk~vgIiG~-G~IG~~va~~l~~~g~~v~~~d~~~~~--------~~~~~~---~--~l~ell~-----~sDiv~~~~ 100 (181)
T d1qp8a1 40 IQGEKVAVLGL-GEIGTRVGKILAALGAQVRGFSRTPKE--------GPWRFT---N--SLEEALR-----EARAAVCAL 100 (181)
T ss_dssp CTTCEEEEESC-STHHHHHHHHHHHTTCEEEEECSSCCC--------SSSCCB---S--CSHHHHT-----TCSEEEECC
T ss_pred ccCceEEEecc-ccccccceeeeeccccccccccccccc--------cceeee---e--chhhhhh-----ccchhhccc
Confidence 35789999997 999999999999999999999876532 111111 1 3333333 278888766
Q ss_pred Ch-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 231 GG-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 231 g~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
.- + .-...++.++++..+|.++.
T Consensus 101 pl~~~t~~li~~~~l~~mk~~ailIN~~R 129 (181)
T d1qp8a1 101 PLNKHTRGLVKYQHLALMAEDAVFVNVGR 129 (181)
T ss_dssp CCSTTTTTCBCHHHHTTSCTTCEEEECSC
T ss_pred ccccccccccccceeeeccccceEEeccc
Confidence 53 1 12567788899999988764
|
| >d1leha1 c.2.1.7 (A:135-364) Leucine dehydrogenase {Bacillus sphaericus [TaxId: 1421]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Leucine dehydrogenase species: Bacillus sphaericus [TaxId: 1421]
Probab=94.07 E-value=0.11 Score=40.56 Aligned_cols=49 Identities=18% Similarity=0.171 Sum_probs=42.4
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD 200 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~ 200 (342)
-.|.+|+|.|- |.+|..+++++...|++|++++.+..+.+.+....|..
T Consensus 37 l~g~~v~IqG~-GnVG~~~a~~L~~~Gakvv~~d~~~~~~~~~~~~~g~~ 85 (230)
T d1leha1 37 LEGLAVSVQGL-GNVAKALCKKLNTEGAKLVVTDVNKAAVSAAVAEEGAD 85 (230)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHHHHHCCE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEeecccHHHHHHHHHhcCCc
Confidence 46889999996 99999999999999999999998888877776566763
|
| >d1mlda1 c.2.1.5 (A:1-144) Malate dehydrogenase {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Pig (Sus scrofa) [TaxId: 9823]
Probab=94.06 E-value=0.11 Score=37.42 Aligned_cols=70 Identities=20% Similarity=0.114 Sum_probs=45.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhhHHHHHHHcCCCeeE----ecCCchhHHHHHHHHCCCCccEEEe
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDKIDLLKNKFGFDEAF----NYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~~~~~~~~~g~~~v~----~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
+|.|.||+|.+|...+.++...+. ++..++.++.+.+.+. -....... ..... ++.+.++ +.|+|+-
T Consensus 2 Kv~IiGA~G~VG~~~A~~l~~~~~~~elvLiDi~~~~~~a~D-l~~~~~~~~~~~~~~~~-~~~~~~~-----~aDivVi 74 (144)
T d1mlda1 2 KVAVLGASGGIGQPLSLLLKNSPLVSRLTLYDIAHTPGVAAD-LSHIETRATVKGYLGPE-QLPDCLK-----GCDVVVI 74 (144)
T ss_dssp EEEEETTTSTTHHHHHHHHHTCTTCSEEEEEESSSHHHHHHH-HTTSSSSCEEEEEESGG-GHHHHHT-----TCSEEEE
T ss_pred eEEEECCCChHHHHHHHHHHhCCccceEEEEeccccchhhHH-HhhhhhhcCCCeEEcCC-ChHHHhC-----CCCEEEE
Confidence 689999889999999998888876 7888887766543332 22221111 11122 4444443 4899999
Q ss_pred CCC
Q 019332 229 NVG 231 (342)
Q Consensus 229 ~~g 231 (342)
+.|
T Consensus 75 tag 77 (144)
T d1mlda1 75 PAG 77 (144)
T ss_dssp CCS
T ss_pred CCC
Confidence 988
|
| >d1xvaa_ c.66.1.5 (A:) Glycine N-methyltransferase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Glycine N-methyltransferase domain: Glycine N-methyltransferase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=94.05 E-value=0.025 Score=46.43 Aligned_cols=95 Identities=12% Similarity=-0.011 Sum_probs=60.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCC-----eeEecCCchhHHHHHHHHCCC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFD-----EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~-----~v~~~~~~~~~~~~i~~~~~~ 221 (342)
.+++.+||=.| .|.|..++.|++. |++|++++.|++-.+.++++. +.. ..+..- ++...-.....+
T Consensus 54 ~~~~~~vLD~G--cG~G~~~~~la~~-g~~v~gvD~S~~ml~~A~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~ 127 (292)
T d1xvaa_ 54 QHGCHRVLDVA--CGTGVDSIMLVEE-GFSVTSVDASDKMLKYALKERWNRRKEPAFDKWVIEEA---NWLTLDKDVPAG 127 (292)
T ss_dssp HTTCCEEEESS--CTTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTTSHHHHTCEEEEC---CGGGHHHHSCCT
T ss_pred hcCCCEEEEec--CCCcHHHHHHHHc-CCeeeeccCchHHHHHHHHHHHhcccccccceeeeeec---cccccccccCCC
Confidence 35677999988 4678888888876 899999999998766665321 211 111111 111111222223
Q ss_pred -CccEEEeCCCh---------------hhHHHHHHhhhhCCEEEE
Q 019332 222 -GIDIYFENVGG---------------KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 222 -~~d~vid~~g~---------------~~~~~~~~~l~~~G~~v~ 250 (342)
.+|.|+..... ..+..+.+.|+|+|.++.
T Consensus 128 ~~fd~v~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~li~ 172 (292)
T d1xvaa_ 128 DGFDAVICLGNSFAHLPDSKGDQSEHRLALKNIASMVRPGGLLVI 172 (292)
T ss_dssp TCEEEEEECSSCGGGSCCTTSSSHHHHHHHHHHHHTEEEEEEEEE
T ss_pred CCceEEEEecCchhhcCCcccChHHHHHHHHHHHHHcCcCcEEEE
Confidence 79988854321 157888999999999876
|
| >d1z45a2 c.2.1.2 (A:11-357) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=94.01 E-value=0.16 Score=42.38 Aligned_cols=32 Identities=16% Similarity=0.121 Sum_probs=28.4
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
..|||+||+|-+|...+..+...|.+|+++++
T Consensus 2 K~ILVTGatGfIG~~lv~~Ll~~g~~V~~~d~ 33 (347)
T d1z45a2 2 KIVLVTGGAGYIGSHTVVELIENGYDCVVADN 33 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCcCeEEEEEC
Confidence 36899999999999999888888999999864
|
| >d1dxya1 c.2.1.4 (A:101-299) D-2-hydroxyisocaproate dehydrogenase {Lactobacillus casei [TaxId: 1582]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: D-2-hydroxyisocaproate dehydrogenase species: Lactobacillus casei [TaxId: 1582]
Probab=93.99 E-value=0.064 Score=41.13 Aligned_cols=85 Identities=21% Similarity=0.208 Sum_probs=57.9
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.+|.|+|. |.||..++++++.+|++|++.++...+. ....+.+. ++.+.+++ .|++.-+..
T Consensus 44 ~~ktvgIiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~~--------~~~~~~~~---~l~~l~~~-----~D~v~~~~p 106 (199)
T d1dxya1 44 GQQTVGVMGT-GHIGQVAIKLFKGFGAKVIAYDPYPMKG--------DHPDFDYV---SLEDLFKQ-----SDVIDLHVP 106 (199)
T ss_dssp GGSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCSS--------CCTTCEEC---CHHHHHHH-----CSEEEECCC
T ss_pred cceeeeeeec-ccccccccccccccceeeeccCCccchh--------hhcchhHH---HHHHHHHh-----cccceeeec
Confidence 4689999996 9999999999999999999998764431 10111221 33444443 678776554
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
. + .-...++.|+++..+|.++-
T Consensus 107 lt~~T~~li~~~~l~~mk~~a~lIN~aR 134 (199)
T d1dxya1 107 GIEQNTHIINEAAFNLMKPGAIVINTAR 134 (199)
T ss_dssp CCGGGTTSBCHHHHHHSCTTEEEEECSC
T ss_pred ccccccccccHHHhhccCCceEEEeccc
Confidence 3 2 12467788888888888764
|
| >d1dusa_ c.66.1.4 (A:) Hypothetical protein MJ0882 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein MJ0882 domain: Hypothetical protein MJ0882 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=93.99 E-value=0.017 Score=44.37 Aligned_cols=101 Identities=16% Similarity=0.093 Sum_probs=62.7
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe-eEecCCchhHHHHHHHHC
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE-AFNYKEEPDLNEALKRYF 219 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~i~~~~ 219 (342)
|.+.....++++||=.| .|.|..++.+++ .+.+|++++.++.-.+.+++ ..+... .+..... ++.+ ...
T Consensus 44 Li~~l~~~~~~~VLDiG--cG~G~~~~~la~-~~~~v~~iD~s~~~i~~a~~n~~~~~l~~~~i~~~~~-d~~~---~~~ 116 (194)
T d1dusa_ 44 LVENVVVDKDDDILDLG--CGYGVIGIALAD-EVKSTTMADINRRAIKLAKENIKLNNLDNYDIRVVHS-DLYE---NVK 116 (194)
T ss_dssp HHHHCCCCTTCEEEEET--CTTSHHHHHHGG-GSSEEEEEESCHHHHHHHHHHHHHTTCTTSCEEEEEC-STTT---TCT
T ss_pred HHHhCCcCCCCeEEEEe--ecCChhHHHHHh-hccccceeeeccccchhHHHHHHHhCCccceEEEEEc-chhh---hhc
Confidence 44556788999999998 466777777775 46799999999887777763 223311 1111111 2111 112
Q ss_pred CCCccEEEeC----CChh----hHHHHHHhhhhCCEEEEE
Q 019332 220 PEGIDIYFEN----VGGK----MLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 220 ~~~~d~vid~----~g~~----~~~~~~~~l~~~G~~v~~ 251 (342)
++.+|+|+-. .+.+ .+..+.+.|+++|+++..
T Consensus 117 ~~~fD~Ii~~~p~~~~~~~~~~~l~~~~~~LkpgG~l~i~ 156 (194)
T d1dusa_ 117 DRKYNKIITNPPIRAGKEVLHRIIEEGKELLKDNGEIWVV 156 (194)
T ss_dssp TSCEEEEEECCCSTTCHHHHHHHHHHHHHHEEEEEEEEEE
T ss_pred cCCceEEEEcccEEecchhhhhHHHHHHHhcCcCcEEEEE
Confidence 2369998852 2222 366778899999997653
|
| >d2blla1 c.2.1.2 (A:316-657) Polymyxin resistance protein ArnA (PrmI) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Polymyxin resistance protein ArnA (PrmI) species: Escherichia coli [TaxId: 562]
Probab=93.94 E-value=0.029 Score=46.96 Aligned_cols=73 Identities=18% Similarity=0.104 Sum_probs=45.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCCCeeE--ecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGFDEAF--NYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~~~v~--~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|-+|..+++.+...| .+|+++++...+...+.+.-.+ ..+ |-.+..++.+...+ ++|+|+.+++
T Consensus 2 KILITG~tGfiG~~l~~~Ll~~g~~~V~~ld~~~~~~~~~~~~~~~-~~i~~Di~~~~~~~~~~~~----~~d~Vih~a~ 76 (342)
T d2blla1 2 RVLILGVNGFIGNHLTERLLREDHYEVYGLDIGSDAISRFLNHPHF-HFVEGDISIHSEWIEYHVK----KCDVVLPLVA 76 (342)
T ss_dssp EEEEETCSSHHHHHHHHHHHHSTTCEEEEEESCCGGGGGGTTCTTE-EEEECCTTTCSHHHHHHHH----HCSEEEECBC
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEeCCCcchhhhccCCCe-EEEECccCChHHHHHHHHh----CCCccccccc
Confidence 59999999999999988877777 5899998765443333211111 122 22221133332322 4899999887
Q ss_pred h
Q 019332 232 G 232 (342)
Q Consensus 232 ~ 232 (342)
-
T Consensus 77 ~ 77 (342)
T d2blla1 77 I 77 (342)
T ss_dssp C
T ss_pred c
Confidence 3
|
| >d1xtpa_ c.66.1.42 (A:) Hypothetical protein Lmaj004091aaa (LmjF30.0810) {Leishmania major [TaxId: 5664]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Hypothetical protein Lmaj004091aaa (LmjF30.0810) species: Leishmania major [TaxId: 5664]
Probab=93.72 E-value=0.097 Score=41.78 Aligned_cols=99 Identities=9% Similarity=0.017 Sum_probs=66.4
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHC--CCCccE
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYF--PEGIDI 225 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~--~~~~d~ 225 (342)
....++.+||=.| .|+|..+..++.....+|+++..+++-.+.+++.+.....+++... + +.++. .+.+|+
T Consensus 89 l~~~~~~~vLD~G--cG~G~~t~~ll~~~~~~v~~vD~s~~~l~~a~~~~~~~~~~~~~~~-d----~~~~~~~~~~fD~ 161 (254)
T d1xtpa_ 89 LPGHGTSRALDCG--AGIGRITKNLLTKLYATTDLLEPVKHMLEEAKRELAGMPVGKFILA-S----METATLPPNTYDL 161 (254)
T ss_dssp STTCCCSEEEEET--CTTTHHHHHTHHHHCSEEEEEESCHHHHHHHHHHTTTSSEEEEEES-C----GGGCCCCSSCEEE
T ss_pred CCCCCCCeEEEec--ccCChhhHHHHhhcCceEEEEcCCHHHHHhhhccccccccceeEEc-c----ccccccCCCccce
Confidence 3456778899888 5778888898887777999999999888888855543333333221 2 12222 236999
Q ss_pred EEeCCCh---------hhHHHHHHhhhhCCEEEEEce
Q 019332 226 YFENVGG---------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 226 vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
|+-...- ..+..+.+.|+++|.++....
T Consensus 162 I~~~~vl~hl~d~d~~~~l~~~~~~LkpgG~iii~e~ 198 (254)
T d1xtpa_ 162 IVIQWTAIYLTDADFVKFFKHCQQALTPNGYIFFKEN 198 (254)
T ss_dssp EEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred EEeeccccccchhhhHHHHHHHHHhcCCCcEEEEEec
Confidence 8753321 236778889999999886543
|
| >d1p3da1 c.5.1.1 (A:11-106) UDP-N-acetylmuramate-alanine ligase MurC {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Haemophilus influenzae [TaxId: 727]
Probab=93.72 E-value=0.32 Score=32.14 Aligned_cols=50 Identities=14% Similarity=0.119 Sum_probs=39.0
Q ss_pred CCCCCCEEEEecCCcHHHHHH-HHHHHHcCCEEEEEeCChh-hHHHHHHHcCCC
Q 019332 149 SPKQGECVFISAASGAVGQLV-GQFAKLLGCYVVGSAGSKD-KIDLLKNKFGFD 200 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~a-i~la~~~ga~Vi~~~~s~~-~~~~~~~~~g~~ 200 (342)
..+...++.+.|. |++|+.+ +++++..|++|.+.+.... ..+.+. +.|..
T Consensus 4 ~~~~~~~ihfiGi-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~~~~L~-~~Gi~ 55 (96)
T d1p3da1 4 EMRRVQQIHFIGI-GGAGMSGIAEILLNEGYQISGSDIADGVVTQRLA-QAGAK 55 (96)
T ss_dssp CCTTCCEEEEETT-TSTTHHHHHHHHHHHTCEEEEEESCCSHHHHHHH-HTTCE
T ss_pred cchhCCEEEEEEE-CHHHHHHHHHHHHhCCCEEEEEeCCCChhhhHHH-HCCCe
Confidence 3456788999997 9999876 8999999999999997643 335555 67874
|
| >d1kjqa2 c.30.1.1 (A:2-112) Glycinamide ribonucleotide transformylase PurT, N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: Glycinamide ribonucleotide transformylase PurT, N-domain species: Escherichia coli [TaxId: 562]
Probab=93.62 E-value=0.056 Score=37.14 Aligned_cols=37 Identities=22% Similarity=0.313 Sum_probs=32.3
Q ss_pred CCC-CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 151 KQG-ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 151 ~~~-~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.++ .+|.|.|+ |-+|.+.++-|+.+|.++++.+.+++
T Consensus 8 ~~~~~kigIlGg-GQL~rMla~aA~~lG~~v~v~d~~~~ 45 (111)
T d1kjqa2 8 RPAATRVMLLGS-GELGKEVAIECQRLGVEVIAVDRYAD 45 (111)
T ss_dssp STTCCEEEEESC-SHHHHHHHHHHHTTTCEEEEEESSTT
T ss_pred CCCCCEEEEEeC-CHHHHHHHHHHHHCCCEEEEEcCCCC
Confidence 444 46999997 99999999999999999999997765
|
| >d1mo9a2 c.3.1.5 (A:193-313) NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase {Xanthobacter sp., py2 [TaxId: 35809]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent 2-ketopropyl coenzyme M oxidoreductase/carboxylase species: Xanthobacter sp., py2 [TaxId: 35809]
Probab=93.51 E-value=0.11 Score=36.11 Aligned_cols=41 Identities=17% Similarity=0.132 Sum_probs=35.3
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+..+..++.+|+|.|+ |.+|+-+++.++..|.+|..+.+++
T Consensus 15 ~~l~~~~~~~vvVvGg-G~ig~E~A~~l~~~g~~vt~i~~~~ 55 (121)
T d1mo9a2 15 EELDYEPGSTVVVVGG-SKTAVEYGCFFNATGRRTVMLVRTE 55 (121)
T ss_dssp HHCCSCCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSC
T ss_pred HHHhhCCCCEEEEECC-CHHHHHHHHHHHhcchhheEeeccc
Confidence 3445678899999997 9999999999999999999999765
|
| >d1h6da1 c.2.1.3 (A:51-212,A:375-433) Glucose-fructose oxidoreductase, N-terminal domain {Zymomonas mobilis [TaxId: 542]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glucose-fructose oxidoreductase, N-terminal domain species: Zymomonas mobilis [TaxId: 542]
Probab=93.42 E-value=0.34 Score=37.47 Aligned_cols=88 Identities=11% Similarity=0.147 Sum_probs=56.2
Q ss_pred CEEEEecCCcHHHH-HHHHHHHHc-CCEEEEEe-CChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHCCC-CccEEE
Q 019332 154 ECVFISAASGAVGQ-LVGQFAKLL-GCYVVGSA-GSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYFPE-GIDIYF 227 (342)
Q Consensus 154 ~~vlI~ga~g~vG~-~ai~la~~~-ga~Vi~~~-~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~~~-~~d~vi 227 (342)
=+|.|.|. |.+|. ..+...+.. +.++++++ +++++.+.+.+++|.. .+..+++ + +++... .+|.|+
T Consensus 34 iriaiIG~-G~~~~~~~~~~~~~~~~~~ivav~d~~~~~a~~~~~~~~i~~~~~~~~~d---~----~ell~~~~iD~V~ 105 (221)
T d1h6da1 34 FGYAIVGL-GKYALNQILPGFAGCQHSRIEALVSGNAEKAKIVAAEYGVDPRKIYDYSN---F----DKIAKDPKIDAVY 105 (221)
T ss_dssp EEEEEECC-SHHHHHTHHHHTTTCSSEEEEEEECSCHHHHHHHHHHTTCCGGGEECSSS---G----GGGGGCTTCCEEE
T ss_pred EEEEEEcC-cHHHHHHHHHHHHhCCCceEEEEecCCHHHHHHHHHhhccccccccccCc---h----hhhcccccceeee
Confidence 37899996 88886 344444433 67888665 4566766665578763 2333432 2 222223 699999
Q ss_pred eCCCh-hhHHHHHHhhhhCCEEE
Q 019332 228 ENVGG-KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 228 d~~g~-~~~~~~~~~l~~~G~~v 249 (342)
-|+.. ...+.+..+|..+-.++
T Consensus 106 I~tp~~~H~~~~~~al~~gk~v~ 128 (221)
T d1h6da1 106 IILPNSLHAEFAIRAFKAGKHVM 128 (221)
T ss_dssp ECSCGGGHHHHHHHHHHTTCEEE
T ss_pred eccchhhhhhHHHHhhhcchhhh
Confidence 88888 66778888887765544
|
| >d1h6va2 c.3.1.5 (A:171-292) Mammalian thioredoxin reductase {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Mammalian thioredoxin reductase species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.29 E-value=0.049 Score=38.13 Aligned_cols=33 Identities=18% Similarity=0.054 Sum_probs=29.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
.++++|.|| |.+|+-.++.++.+|++|..+.++
T Consensus 20 P~~vvIIGg-G~iG~E~A~~l~~lG~~Vtii~~~ 52 (122)
T d1h6va2 20 PGKTLVVGA-SYVALECAGFLAGIGLDVTVMVRS 52 (122)
T ss_dssp CCSEEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred CCeEEEECC-CccHHHHHHHHhhcCCeEEEEEec
Confidence 357999997 999999999999999999998754
|
| >d1xj5a_ c.66.1.17 (A:) Spermidine synthase {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=93.25 E-value=0.051 Score=44.36 Aligned_cols=96 Identities=16% Similarity=0.104 Sum_probs=62.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcC-----C--CeeEecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFG-----F--DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g-----~--~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
..++|||.|+ |-|..+-.+++..+. +|.++..+++=.+.++ ++- . +.-++..-. |-.+.+++...+.+
T Consensus 80 ~pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEiD~~Vi~~~~-~~f~~~~~~~~~~r~~i~~~-Da~~~l~~~~~~~y 155 (290)
T d1xj5a_ 80 NPKKVLVIGG--GDGGVLREVARHASIEQIDMCEIDKMVVDVSK-QFFPDVAIGYEDPRVNLVIG-DGVAFLKNAAEGSY 155 (290)
T ss_dssp CCCEEEEETC--SSSHHHHHHTTCTTCCEEEEEESCHHHHHHHH-HHCHHHHGGGGSTTEEEEES-CHHHHHHTSCTTCE
T ss_pred CCcceEEecC--CchHHHHHHHhcccceeeEEecCCHHHHHHHH-HhchhhhccccCCCcEEEEc-cHHHHHhhccccCc
Confidence 3468999994 556667788887776 8999999888777776 432 0 110111111 44555655444479
Q ss_pred cEEE-eCCC----------hhhHHHHHHhhhhCCEEEEE
Q 019332 224 DIYF-ENVG----------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 224 d~vi-d~~g----------~~~~~~~~~~l~~~G~~v~~ 251 (342)
|+|| |+.. .+.++.+.++|+++|.++.-
T Consensus 156 DvIi~D~~dp~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q 194 (290)
T d1xj5a_ 156 DAVIVDSSDPIGPAKELFEKPFFQSVARALRPGGVVCTQ 194 (290)
T ss_dssp EEEEECCCCTTSGGGGGGSHHHHHHHHHHEEEEEEEEEE
T ss_pred cEEEEcCCCCCCcchhhCCHHHHHHHHHhcCCCcEEEEe
Confidence 9765 4433 13678899999999998864
|
| >d2cl5a1 c.66.1.1 (A:3-216) Catechol O-methyltransferase, COMT {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: COMT-like domain: Catechol O-methyltransferase, COMT species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=93.25 E-value=0.035 Score=43.28 Aligned_cols=100 Identities=11% Similarity=0.136 Sum_probs=62.2
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHH---HC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKR---YF 219 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~---~~ 219 (342)
.+..+..+||=+| ++.|..++.+|+++ +.+|+.+..+++..+.+++ ..|....+..... +..+.+.+ ..
T Consensus 52 v~~~kpk~ILEiG--t~~G~Sti~la~al~~~g~v~sid~~~~~~~~a~~~~~~~gl~~~i~l~~G-d~~e~l~~l~~~~ 128 (214)
T d2cl5a1 52 IREYSPSLVLELG--AYCGYSAVRMARLLQPGARLLTMEMNPDYAAITQQMLNFAGLQDKVTILNG-ASQDLIPQLKKKY 128 (214)
T ss_dssp HHHHCCSEEEEEC--CTTSHHHHHHHTTCCTTCEEEEEESCHHHHHHHHHHHHHHTCGGGEEEEES-CHHHHGGGHHHHS
T ss_pred HHhhCCCEEEEEc--cCchhHHHHHHHhCCCccEEEEEeccHHHHHHHHHHHHHcCCCccceeeec-cccccccchhhcc
Confidence 3444557899999 67788888999876 5699999999887766652 4466432333333 44443333 22
Q ss_pred C-CCccEEE-eCCChh-----hHHHHHHhhhhCCEEEE
Q 019332 220 P-EGIDIYF-ENVGGK-----MLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 220 ~-~~~d~vi-d~~g~~-----~~~~~~~~l~~~G~~v~ 250 (342)
. +.+|++| |+.-.. .+...++.|++||.++.
T Consensus 129 ~~~~~D~ifiD~~~~~~~~~~~l~~~~~lLkpGGvIv~ 166 (214)
T d2cl5a1 129 DVDTLDMVFLDHWKDRYLPDTLLLEKCGLLRKGTVLLA 166 (214)
T ss_dssp CCCCEEEEEECSCGGGHHHHHHHHHHTTCEEEEEEEEE
T ss_pred cccccceeeecccccccccHHHHHHHhCccCCCcEEEE
Confidence 2 2689775 433322 23445567999997653
|
| >d1im8a_ c.66.1.14 (A:) Hypothetical protein HI0319 (YecO) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Hypothetical protein HI0319 (YecO) domain: Hypothetical protein HI0319 (YecO) species: Haemophilus influenzae [TaxId: 727]
Probab=93.18 E-value=0.097 Score=40.77 Aligned_cols=97 Identities=8% Similarity=0.086 Sum_probs=62.1
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHH---cCCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHCCCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKL---LGCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~---~ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
.++++.+||=.| .|.|..+..+++. .+++|++++.|++-.+.+++.+ +....+..... + ..+...+.
T Consensus 36 ~~~~~~~vLDlG--CGtG~~~~~l~~~~~~~~~~v~giD~S~~ml~~A~~~~~~~~~~~~~~~~~~-d----~~~~~~~~ 108 (225)
T d1im8a_ 36 FVTADSNVYDLG--CSRGAATLSARRNINQPNVKIIGIDNSQPMVERCRQHIAAYHSEIPVEILCN-D----IRHVEIKN 108 (225)
T ss_dssp HCCTTCEEEEES--CTTCHHHHHHHHTCCCSSCEEEEECSCHHHHHHHHHHHHTSCCSSCEEEECS-C----TTTCCCCS
T ss_pred hcCCCCEEEEec--cchhhHHHHHHHhhcCCCCceEEeCCCHHHHHHHHHHhHhhcccchhhhccc-h----hhcccccc
Confidence 368899999998 4667777777775 4789999999998777777433 22211211111 1 11112224
Q ss_pred ccEEEeCCC-------h--hhHHHHHHhhhhCCEEEEEc
Q 019332 223 IDIYFENVG-------G--KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 223 ~d~vid~~g-------~--~~~~~~~~~l~~~G~~v~~g 252 (342)
+|+++-+.. . ..+..+.+.|+|+|.++...
T Consensus 109 ~d~i~~~~~l~~~~~~d~~~~l~~i~~~LkpgG~li~~~ 147 (225)
T d1im8a_ 109 ASMVILNFTLQFLPPEDRIALLTKIYEGLNPNGVLVLSE 147 (225)
T ss_dssp EEEEEEESCGGGSCGGGHHHHHHHHHHHEEEEEEEEEEE
T ss_pred ceeeEEeeeccccChhhHHHHHHHHHHhCCCCceeeccc
Confidence 666554322 1 35788899999999998754
|
| >d2i6ga1 c.66.1.44 (A:1-198) Putative methyltransferase TehB {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TehB-like domain: Putative methyltransferase TehB species: Salmonella typhimurium [TaxId: 90371]
Probab=93.13 E-value=0.17 Score=38.36 Aligned_cols=93 Identities=15% Similarity=0.104 Sum_probs=59.2
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCee-EecCCchhHHHHHHHH-CCCCcc
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDEA-FNYKEEPDLNEALKRY-FPEGID 224 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~v-~~~~~~~~~~~~i~~~-~~~~~d 224 (342)
+++| +||=.|. |.|..+..+++. |++|++++.|++-.+.+++ +.+.+.+ +...+ +.+. ..+.||
T Consensus 29 ~~~g-rvLDiGc--G~G~~~~~la~~-g~~v~gvD~s~~~l~~a~~~~~~~~~~~~~~~~~d-------~~~~~~~~~fD 97 (198)
T d2i6ga1 29 VAPG-RTLDLGC--GNGRNSLYLAAN-GYDVTAWDKNPASMANLERIKAAEGLDNLQTDLVD-------LNTLTFDGEYD 97 (198)
T ss_dssp SCSC-EEEEETC--TTSHHHHHHHHT-TCEEEEEESCHHHHHHHHHHHHHTTCTTEEEEECC-------TTTCCCCCCEE
T ss_pred CCCC-cEEEECC--CCCHHHHHHHHH-hhhhccccCcHHHHHHHHHHhhhccccchhhhhee-------ccccccccccc
Confidence 4454 8999984 588888888764 8999999999987766552 3344321 11111 0111 123689
Q ss_pred EEEeCCCh---------hhHHHHHHhhhhCCEEEEEce
Q 019332 225 IYFENVGG---------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 225 ~vid~~g~---------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+...-- ..+..+.++|+++|.++....
T Consensus 98 ~I~~~~~~~~~~~~~~~~~l~~~~~~L~pgG~~~~~~~ 135 (198)
T d2i6ga1 98 FILSTVVMMFLEAQTIPGLIANMQRCTKPGGYNLIVAA 135 (198)
T ss_dssp EEEEESCGGGSCTTHHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred EEEEeeeeecCCHHHHHHHHHHHHHHcCCCcEEEEEEe
Confidence 98853321 256778889999999887644
|
| >d1b26a1 c.2.1.7 (A:179-412) Glutamate dehydrogenase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Thermotoga maritima [TaxId: 2336]
Probab=93.11 E-value=0.15 Score=39.94 Aligned_cols=35 Identities=29% Similarity=0.383 Sum_probs=29.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHH-HHcCCEEEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFA-KLLGCYVVGSAGS 186 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la-~~~ga~Vi~~~~s 186 (342)
-.+.+|+|.|. |.+|..+++.+ +..|++|++++.+
T Consensus 29 l~g~~vaIqG~-GnVG~~~a~~L~~e~Ga~vv~vsd~ 64 (234)
T d1b26a1 29 PKKATVAVQGF-GNVGQFAALLISQELGSKVVAVSDS 64 (234)
T ss_dssp TTTCEEEEECC-SHHHHHHHHHHHHHHCCEEEEEEET
T ss_pred cCCCEEEEECC-CHHHHHHHHHHHHhcCCceEEeecC
Confidence 46889999996 99999998877 5689999988743
|
| >d1xeaa1 c.2.1.3 (A:2-122,A:267-312) Putative oxidoreductase VCA1048 {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative oxidoreductase VCA1048 species: Vibrio cholerae [TaxId: 666]
Probab=93.09 E-value=0.28 Score=36.00 Aligned_cols=134 Identities=11% Similarity=0.111 Sum_probs=76.9
Q ss_pred EEEEecCCcHHHHH-HHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh
Q 019332 155 CVFISAASGAVGQL-VGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~-ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~ 232 (342)
+|.|.|+ |.+|.. .+...+.. +.++++.++++++.+.+.++++...+++ ++.+.+. ..+|.|+-|+..
T Consensus 3 rvgiiG~-G~~~~~~~~~~l~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~-----~~~~ll~----~~iD~V~I~tp~ 72 (167)
T d1xeaa1 3 KIAMIGL-GDIAQKAYLPVLAQWPDIELVLCTRNPKVLGTLATRYRVSATCT-----DYRDVLQ----YGVDAVMIHAAT 72 (167)
T ss_dssp EEEEECC-CHHHHHTHHHHHTTSTTEEEEEECSCHHHHHHHHHHTTCCCCCS-----STTGGGG----GCCSEEEECSCG
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEECCHHHHHHHHHhcccccccc-----cHHHhcc----cccceecccccc
Confidence 6889996 989864 45555544 5587777778788777765788754432 1111221 248999999888
Q ss_pred -hhHHHHHHhhhhCCEEEEEceeccccCCCCccccchHHH-Hhcceee-ecceecccccchHHHHHHHHHHHHcCCcee
Q 019332 233 -KMLDAVLLNMKIHGRIAVCGMISQYNLDRPEGVHNLMYL-VTKRVRM-EGFLVRDYYHLYPKFLEMIIPHIKEGKIVY 308 (342)
Q Consensus 233 -~~~~~~~~~l~~~G~~v~~g~~~~~~~~~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~ 308 (342)
...+.+..++..+-.+ .+.-+-..+. ......... -.++..+ .++ ..+...+.++.+.+..|.+..
T Consensus 73 ~~H~~~~~~al~~gk~V-~~EKP~~~~~---~e~~~l~~~a~~~~~~~~vg~------~r~~~~~~~~~~~~~~G~ig~ 141 (167)
T d1xeaa1 73 DVHSTLAAFFLHLGIPT-FVDKPLAASA---QECENLYELAEKHHQPLYVGF------NGFDAMVQDWLQVAAAGKLPT 141 (167)
T ss_dssp GGHHHHHHHHHHTTCCE-EEESCSCSSH---HHHHHHHHHHHHTTCCEEEEC------GTHHHHHHHHHHHHHHTCCCH
T ss_pred ccccccccccccccccc-ccCCCCcCCH---HHHHHHHHHHHHcCCEEEEEe------CcCCHHHHHHHHHhhcCCCCc
Confidence 6777888888877654 3432211100 001111111 2223322 221 123455677788888888763
|
| >d2bhsa1 c.79.1.1 (A:2-293) O-acetylserine sulfhydrylase (Cysteine synthase) {Escherichia coli, isoform B (CysM) [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Escherichia coli, isoform B (CysM) [TaxId: 562]
Probab=92.98 E-value=1.3 Score=35.52 Aligned_cols=106 Identities=16% Similarity=0.168 Sum_probs=66.0
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEecCCc--------------
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNYKEE-------------- 208 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~~~~-------------- 208 (342)
+.+.+.++.+| |...+|..|++++..|+.+|.+++++.. ++.|.+.++ .+|+.-++...+.
T Consensus 53 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~v~~v~~~~~~~~a~~~~~~~~~ 130 (292)
T d2bhsa1 53 KRGEIKPGDVL-IEATSGNTGIALAMIAALKGYRMKLLMPDNMSQERRAAMR-AYGAELILVTKEQGMEGARDLALEMAN 130 (292)
T ss_dssp HTTSCCTTSEE-EEECCSHHHHHHHHHHHHHTCEEEEEEESCCCHHHHHHHH-HTTCEEEEECTTTHHHHHHHHHHHHHH
T ss_pred HhCCcCCCcee-eeecccchhHHHHHHHHhcCcceEeeeccCchhhhhHHHH-HhCCCcceeecccchHHHHHHHhhccc
Confidence 33556666655 4455699999999999999996555543 556777777 8998532211110
Q ss_pred --------------------hhHHHHHHHHCCCCccEEEeCCCh-hhHH---HHHHhhhhCCEEEEEce
Q 019332 209 --------------------PDLNEALKRYFPEGIDIYFENVGG-KMLD---AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 209 --------------------~~~~~~i~~~~~~~~d~vid~~g~-~~~~---~~~~~l~~~G~~v~~g~ 253 (342)
.....+|.+..++.+|.++-++|+ ..+. ..++.+.+..+++.+..
T Consensus 131 ~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~q~~~~~d~vv~~~G~Gg~~~G~~~~~k~~~~~~~i~~Vep 199 (292)
T d2bhsa1 131 RGEGKLLDQFNNPDNPYAHYTTTGPEIWQQTGGRITHFVSSMGTTGTITGVSRFMREQSKPVTIVGLQP 199 (292)
T ss_dssp HTSSEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHTSSSCCEEEEEEE
T ss_pred cccccccCCCchhcchhhHHHHHHHHhHHhcCCCCCcccccCCCccchhhhhhhhhhccCcceEEEecc
Confidence 012234444444568999988886 4444 34445556677766654
|
| >d2b2ca1 c.66.1.17 (A:3-314) Spermidine synthase {Caenorhabditis elegans [TaxId: 6239]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Caenorhabditis elegans [TaxId: 6239]
Probab=92.87 E-value=0.13 Score=42.24 Aligned_cols=96 Identities=20% Similarity=0.161 Sum_probs=61.3
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc-CC-Cee-----EecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF-GF-DEA-----FNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~-g~-~~v-----~~~~~~~~~~~~i~~~~~~~~ 223 (342)
...+|||.| ||-|..+-.+++.... +|.++..+++=.+.++ ++ .. ... ++..-. |..+.+++ +.+.+
T Consensus 106 ~pk~VLIiG--gG~G~~~rellk~~~v~~v~~VEID~~Vv~~a~-~~~~~~~~~~~dprv~i~i~-Da~~~l~~-~~~~y 180 (312)
T d2b2ca1 106 DPKRVLIIG--GGDGGILREVLKHESVEKVTMCEIDEMVIDVAK-KFLPGMSCGFSHPKLDLFCG-DGFEFLKN-HKNEF 180 (312)
T ss_dssp SCCEEEEES--CTTSHHHHHHTTCTTCCEEEEECSCHHHHHHHH-HHCTTTSGGGGCTTEEEECS-CHHHHHHH-CTTCE
T ss_pred CCCeEEEeC--CCchHHHHHHHHcCCcceEEEEcccHHHHHHHH-hhchhhccccCCCCeEEEEc-hHHHHHHh-CCCCC
Confidence 346899999 4556667788887765 8999998888777777 43 21 011 111111 44455554 44579
Q ss_pred cEEEe-CCC----------hhhHHHHHHhhhhCCEEEEEc
Q 019332 224 DIYFE-NVG----------GKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 224 d~vid-~~g----------~~~~~~~~~~l~~~G~~v~~g 252 (342)
|+||- ... .+.+..+.++|+++|.++.-+
T Consensus 181 DvII~D~~dp~~~~~~L~t~eFy~~~~~~L~~~Gi~v~q~ 220 (312)
T d2b2ca1 181 DVIITDSSDPVGPAESLFGQSYYELLRDALKEDGILSSQG 220 (312)
T ss_dssp EEEEECCC-------------HHHHHHHHEEEEEEEEEEC
T ss_pred CEEEEcCCCCCCcchhhhhHHHHHHHHhhcCCCcEEEEec
Confidence 99863 221 135778889999999988643
|
| >d1txga2 c.2.1.6 (A:1-180) Glycerol-3- phosphate dehydrogenase {Archaeoglobus fulgidus [TaxId: 2234]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Glycerol-3- phosphate dehydrogenase species: Archaeoglobus fulgidus [TaxId: 2234]
Probab=92.81 E-value=0.51 Score=35.10 Aligned_cols=81 Identities=17% Similarity=0.076 Sum_probs=52.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh--HHHHHHHcCCC---------eeEecCCchhHHHHHHHHCCCCc
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK--IDLLKNKFGFD---------EAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~--~~~~~~~~g~~---------~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
+|.|.|+ |..|.+.+..+...|.+|+...+..++ .+.+. +-... ..+...+ ++.+.++ ..
T Consensus 2 kI~ViGa-G~~GtalA~~la~~g~~V~l~~r~~~~~~~~~i~-~~~~~~~~~~~~~~~~i~~~~--~~~~~~~-----~a 72 (180)
T d1txga2 2 IVSILGA-GAMGSALSVPLVDNGNEVRIWGTEFDTEILKSIS-AGREHPRLGVKLNGVEIFWPE--QLEKCLE-----NA 72 (180)
T ss_dssp EEEEESC-CHHHHHHHHHHHHHCCEEEEECCGGGHHHHHHHH-TTCCBTTTTBCCCSEEEECGG--GHHHHHT-----TC
T ss_pred EEEEECC-CHHHHHHHHHHHHCCCEEEEEEecccHHHHHHHh-hhhhhhhhcchhccccccccc--cHHHHHh-----cc
Confidence 5889997 999999888888889999999875443 23332 11110 0111111 3333332 38
Q ss_pred cEEEeCCChhhHHHHHHhhhh
Q 019332 224 DIYFENVGGKMLDAVLLNMKI 244 (342)
Q Consensus 224 d~vid~~g~~~~~~~~~~l~~ 244 (342)
|+++.++....+...++-+++
T Consensus 73 d~Ii~avps~~~~~~~~~l~~ 93 (180)
T d1txga2 73 EVVLLGVSTDGVLPVMSRILP 93 (180)
T ss_dssp SEEEECSCGGGHHHHHHHHTT
T ss_pred chhhcccchhhhHHHHHhhcc
Confidence 999999999877777776655
|
| >d1t4ba1 c.2.1.3 (A:1-133,A:355-367) Aspartate beta-semialdehyde dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=92.76 E-value=0.16 Score=36.61 Aligned_cols=81 Identities=22% Similarity=0.151 Sum_probs=47.3
Q ss_pred EEEEecCCcHHHHHHHHH-HHHc---CCEEEEEeCChhhHHHHHHHcCC--CeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 155 CVFISAASGAVGQLVGQF-AKLL---GCYVVGSAGSKDKIDLLKNKFGF--DEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~l-a~~~---ga~Vi~~~~s~~~~~~~~~~~g~--~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
+|.|.||+|-+|+-.+++ +... -.+++...++........ ++. ..+.+..+. ..+. ++|++|-
T Consensus 3 kVaIvGATG~VGqeli~~Ll~~~~~p~~~l~~~~ss~s~g~~~~--~~~~~~~~~~~~~~----~~~~-----~~DivF~ 71 (146)
T d1t4ba1 3 NVGFIGWRGMVGSVLMQRMVEERDFDAIRPVFFSTSQLGQAAPS--FGGTTGTLQDAFDL----EALK-----ALDIIVT 71 (146)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTTGGGGSEEEEEESSSTTSBCCG--GGTCCCBCEETTCH----HHHH-----TCSEEEE
T ss_pred EEEEECCccHHHHHHHHHHHhCCCCCeeEEEEeecccccccccc--ccCCceeeecccch----hhhh-----cCcEEEE
Confidence 689999999999999984 4432 236776665543211111 111 112222121 1121 4899999
Q ss_pred CCChhhHHHHHHhhhhCC
Q 019332 229 NVGGKMLDAVLLNMKIHG 246 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G 246 (342)
|++.+........+...|
T Consensus 72 a~~~~~s~~~~~~~~~~g 89 (146)
T d1t4ba1 72 CQGGDYTNEIYPKLRESG 89 (146)
T ss_dssp CSCHHHHHHHHHHHHHTT
T ss_pred ecCchHHHHhhHHHHhcC
Confidence 999976666666665555
|
| >d1qyca_ c.2.1.2 (A:) Phenylcoumaran benzylic ether reductase {Loblolly pine (Pinus taeda) [TaxId: 3352]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Phenylcoumaran benzylic ether reductase species: Loblolly pine (Pinus taeda) [TaxId: 3352]
Probab=92.64 E-value=0.038 Score=44.91 Aligned_cols=35 Identities=17% Similarity=0.188 Sum_probs=31.5
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.+|||+||+|-+|..++..+...|.+|++++++..
T Consensus 4 kKILVtGatG~iG~~l~~~L~~~G~~V~~l~R~~~ 38 (307)
T d1qyca_ 4 SRILLIGATGYIGRHVAKASLDLGHPTFLLVREST 38 (307)
T ss_dssp CCEEEESTTSTTHHHHHHHHHHTTCCEEEECCCCC
T ss_pred CEEEEECCCcHHHHHHHHHHHHCCCeEEEEECCCc
Confidence 57999999999999999999888999999998653
|
| >d1ebda2 c.3.1.5 (A:155-271) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=92.61 E-value=0.11 Score=35.79 Aligned_cols=34 Identities=18% Similarity=0.229 Sum_probs=30.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
..+++|.|| |.+|+-+++.+..+|.+|+.+.+.+
T Consensus 22 p~~v~IiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 55 (117)
T d1ebda2 22 PKSLVVIGG-GYIGIELGTAYANFGTKVTILEGAG 55 (117)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred CCeEEEECC-CccceeeeeeecccccEEEEEEecc
Confidence 478999997 9999999999999999999998765
|
| >d1j6ua1 c.5.1.1 (A:0-88) UDP-N-acetylmuramate-alanine ligase MurC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: MurCD N-terminal domain superfamily: MurCD N-terminal domain family: MurCD N-terminal domain domain: UDP-N-acetylmuramate-alanine ligase MurC species: Thermotoga maritima [TaxId: 2336]
Probab=92.56 E-value=0.45 Score=30.85 Aligned_cols=66 Identities=17% Similarity=0.177 Sum_probs=44.3
Q ss_pred CEEEEecCCcHHHHH-HHHHHHHcCCEEEEEeCChh-hHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQL-VGQFAKLLGCYVVGSAGSKD-KIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~-ai~la~~~ga~Vi~~~~s~~-~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
-+|-+.|. ||+|+. ++++++..|++|.+.+..+. ..+.++ +.|+.....+... ++ .++|+|+-..+
T Consensus 2 ~~ihfiGI-gG~GMs~LA~~L~~~G~~VsGSD~~~~~~t~~L~-~~Gi~i~~gh~~~-~i---------~~~d~vV~SsA 69 (89)
T d1j6ua1 2 MKIHFVGI-GGIGMSAVALHEFSNGNDVYGSNIEETERTAYLR-KLGIPIFVPHSAD-NW---------YDPDLVIKTPA 69 (89)
T ss_dssp CEEEEETT-TSHHHHHHHHHHHHTTCEEEEECSSCCHHHHHHH-HTTCCEESSCCTT-SC---------CCCSEEEECTT
T ss_pred cEEEEEeE-CHHHHHHHHHHHHhCCCeEEEEeCCCChhHHHHH-HCCCeEEeeeccc-cc---------CCCCEEEEecC
Confidence 36778887 999985 56888999999999998764 345566 8887533322221 21 24787775554
|
| >d2pgda2 c.2.1.6 (A:1-176) 6-phosphogluconate dehydrogenase {Sheep (Ovis orientalis aries) [TaxId: 9940]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Sheep (Ovis orientalis aries) [TaxId: 9940]
Probab=92.51 E-value=0.44 Score=35.28 Aligned_cols=93 Identities=12% Similarity=-0.002 Sum_probs=57.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCe--eEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDE--AFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+|-++|. |.+|...+.-+...|.+|++..+++++.+.+. +.++.. .... ...+.+.+... ..|.++-++.
T Consensus 3 ~nIg~IGl-G~MG~~mA~~L~~~G~~V~v~dr~~~~~~~l~-~~~~~~~~~~~a----~~~~~~~~~~~-~~~~ii~~~~ 75 (176)
T d2pgda2 3 ADIALIGL-AVMGQNLILNMNDHGFVVCAFNRTVSKVDDFL-ANEAKGTKVLGA----HSLEEMVSKLK-KPRRIILLVK 75 (176)
T ss_dssp BSEEEECC-SHHHHHHHHHHHHTTCCEEEECSSTHHHHHHH-HTTTTTSSCEEC----SSHHHHHHHBC-SSCEEEECSC
T ss_pred CcEEEEeE-hHHHHHHHHHHHHCCCeEEEEcCCHHHHHHHH-Hhccccccccch----hhhhhhhhhhc-ccceEEEecC
Confidence 35889996 99999888777778999999999999988887 554421 1111 11222222222 2566666555
Q ss_pred h-hh----HHHHHHhhhhCCEEEEEce
Q 019332 232 G-KM----LDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~~----~~~~~~~l~~~G~~v~~g~ 253 (342)
. +. ...+...++++-.++..++
T Consensus 76 ~~~~v~~v~~~l~~~~~~g~iiid~sT 102 (176)
T d2pgda2 76 AGQAVDNFIEKLVPLLDIGDIIIDGGN 102 (176)
T ss_dssp TTHHHHHHHHHHHHHCCTTCEEEECSC
T ss_pred chHHHHHHHHHHHhccccCcEEEecCc
Confidence 4 32 2334445555666666554
|
| >d1id1a_ c.2.1.9 (A:) Rck domain from putative potassium channel Kch {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Rck domain from putative potassium channel Kch species: Escherichia coli [TaxId: 562]
Probab=92.41 E-value=1.3 Score=31.66 Aligned_cols=95 Identities=6% Similarity=-0.090 Sum_probs=59.2
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhH-HHHHH--HcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKI-DLLKN--KFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~-~~~~~--~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
-+.++|.|. |.+|..+++.+...|.+|+++..++++. +.+.+ ..|. .++.-+ . .-.+.+++..-+.+|.++-+
T Consensus 3 knHiII~G~-g~~g~~l~~~L~~~~~~v~vId~d~~~~~~~~~~~~~~~~-~vi~Gd-~-~d~~~L~~a~i~~a~~vi~~ 78 (153)
T d1id1a_ 3 KDHFIVCGH-SILAINTILQLNQRGQNVTVISNLPEDDIKQLEQRLGDNA-DVIPGD-S-NDSSVLKKAGIDRCRAILAL 78 (153)
T ss_dssp CSCEEEECC-SHHHHHHHHHHHHTTCCEEEEECCCHHHHHHHHHHHCTTC-EEEESC-T-TSHHHHHHHTTTTCSEEEEC
T ss_pred CCEEEEECC-CHHHHHHHHHHHHcCCCEEEEeccchhHHHHHHHhhcCCc-EEEEcc-C-cchHHHHHhccccCCEEEEc
Confidence 356899997 9999999999999999999998876543 23331 2233 233222 2 22445565544478999988
Q ss_pred CChhhH--H--HHHHhhhhCCEEEEE
Q 019332 230 VGGKML--D--AVLLNMKIHGRIAVC 251 (342)
Q Consensus 230 ~g~~~~--~--~~~~~l~~~G~~v~~ 251 (342)
.+.+.. . ...+-+.+.-+++..
T Consensus 79 ~~~d~~n~~~~~~~r~~~~~~~iia~ 104 (153)
T d1id1a_ 79 SDNDADNAFVVLSAKDMSSDVKTVLA 104 (153)
T ss_dssp SSCHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred cccHHHHHHHHHHHHHhCCCCceEEE
Confidence 886422 2 223344555566544
|
| >d1ek6a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.30 E-value=0.22 Score=41.33 Aligned_cols=31 Identities=19% Similarity=0.126 Sum_probs=28.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSA 184 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~ 184 (342)
++|||+||+|-+|...+..+...|.+|++++
T Consensus 3 kKILITG~tGfIGs~lv~~Ll~~g~~V~~ld 33 (346)
T d1ek6a_ 3 EKVLVTGGAGYIGSHTVLELLEAGYLPVVID 33 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHTTCCEEEEE
T ss_pred CeEEEECCCcHHHHHHHHHHHHCcCEEEEEE
Confidence 5899999999999999999988899999985
|
| >d1jbqa_ c.79.1.1 (A:) Cystathionine beta-synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Cystathionine beta-synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=92.23 E-value=1.3 Score=36.84 Aligned_cols=106 Identities=18% Similarity=0.195 Sum_probs=67.0
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEec-C-------Cc------
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNY-K-------EE------ 208 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~-~-------~~------ 208 (342)
+.+.++++..| |...+|..|.+++..|+.+|.+.+++.. +++|.+.++ .+|++-+... . ..
T Consensus 90 ~~g~~~~~~~v-v~aSsGN~g~a~A~~a~~~Gi~~~iv~p~~~~~~k~~~i~-~~GA~vv~v~~~~~~~~~~~~~~~~~~ 167 (355)
T d1jbqa_ 90 RDGTLKPGDTI-IEPTSGNTGIGLALAAAVRGYRCIIVMPEKMSSEKVDVLR-ALGAEIVRTPTNARFDSPESHVGVAWR 167 (355)
T ss_dssp HHTCSCTTCEE-EEECSSHHHHHHHHHHHHHTCEEEEEECSCCCHHHHHHHH-HTTCEEEECCC-------CCHHHHHHH
T ss_pred HcCCcccCceE-EEecccchhhHHHHHHHhccCCeEEEeeccchHHHHHHHH-hcCCeEEEecccccchhhhhhhhHHHH
Confidence 33566777665 4555799999999999999997666654 446778887 8998532210 0 00
Q ss_pred ------------------------hhHHHHHHHHCCCCccEEEeCCCh-hhHHH---HHHhhhhCCEEEEEce
Q 019332 209 ------------------------PDLNEALKRYFPEGIDIYFENVGG-KMLDA---VLLNMKIHGRIAVCGM 253 (342)
Q Consensus 209 ------------------------~~~~~~i~~~~~~~~d~vid~~g~-~~~~~---~~~~l~~~G~~v~~g~ 253 (342)
.....++.+..++.+|.++-++|+ ..+.- .++...+.-+++.+..
T Consensus 168 ~~~~~~~~~~~~~~~~~~~~~ag~~t~~~EI~~ql~~~~d~vv~~vG~GG~~~Gi~~~lk~~~~~~kii~vep 240 (355)
T d1jbqa_ 168 LKNEIPNSHILDQYRNASNPLAHYDTTADEILQQCDGKLDMLVASVGTGGTITGIARKLKEKCPGCRIIGVDP 240 (355)
T ss_dssp HHHHSTTEECCCTTTCTHHHHHHHHTHHHHHHHHHTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHhccccccccccCcccchhhhcccchhhhhhhcCCCCCeeEecccCCchHHHHHHHHhhcCCcceEEeecc
Confidence 012234444344468999999997 44433 4444555677776654
|
| >d1gtea4 c.4.1.1 (A:184-287,A:441-532) Dihydropyrimidine dehydrogenase, domain 2 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 2 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=92.22 E-value=0.06 Score=40.75 Aligned_cols=35 Identities=14% Similarity=0.097 Sum_probs=30.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 188 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~ 188 (342)
+.+|+|.|| |..|+.++..++..|+ .|++..+++.
T Consensus 4 ~~kVaIIGa-GpaGl~aA~~l~~~G~~~V~v~E~~~~ 39 (196)
T d1gtea4 4 SAKIALLGA-GPASISCASFLARLGYSDITIFEKQEY 39 (196)
T ss_dssp GCCEEEECC-SHHHHHHHHHHHHTTCCCEEEEESSSS
T ss_pred CCEEEEECC-hHHHHHHHHHHHHCCCCeEEEEEecCc
Confidence 468999997 9999999999999999 5888887664
|
| >d1b0aa1 c.2.1.7 (A:123-288) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Escherichia coli [TaxId: 562]
Probab=92.15 E-value=0.24 Score=36.30 Aligned_cols=78 Identities=18% Similarity=0.133 Sum_probs=56.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
--.|.+|+|.|-+.-+|.-+..++...|++|+...+... ++.+.+++ .|+++-+
T Consensus 34 ~l~GK~v~VIGrS~~VG~Pla~lL~~~gatVt~~h~~t~---------------------~l~~~~~~-----ADivI~a 87 (166)
T d1b0aa1 34 DTFGLNAVVIGASNIVGRPMSMELLLAGCTTTVTHRFTK---------------------NLRHHVEN-----ADLLIVA 87 (166)
T ss_dssp CCTTCEEEEECCCTTTHHHHHHHHHTTTCEEEEECSSCS---------------------CHHHHHHH-----CSEEEEC
T ss_pred ccccceEEEEeccccccHHHHHHHHHhhccccccccccc---------------------hhHHHHhh-----hhHhhhh
Confidence 357899999999889999999999999999876653321 22333333 7889988
Q ss_pred CChhhHHHHHHhhhhCCEEEEEcee
Q 019332 230 VGGKMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 230 ~g~~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+|...+- --+.++++..++.+|..
T Consensus 88 ~G~p~~i-~~~~vk~g~vvIDvGi~ 111 (166)
T d1b0aa1 88 VGKPGFI-PGDWIKEGAIVIDVGIN 111 (166)
T ss_dssp SCCTTCB-CTTTSCTTCEEEECCCE
T ss_pred ccCcccc-cccccCCCcEEEecCce
Confidence 8873221 13467888888888864
|
| >d1nhpa2 c.3.1.5 (A:120-242) NADH peroxidase {Enterococcus faecalis [TaxId: 1351]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH peroxidase species: Enterococcus faecalis [TaxId: 1351]
Probab=92.14 E-value=0.2 Score=34.85 Aligned_cols=38 Identities=13% Similarity=-0.010 Sum_probs=32.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.-..+.+|+|.|+ |.+|+-+++.+...|.+|+.+.+++
T Consensus 26 ~~~~~k~vvViGg-G~iG~E~A~~l~~~g~~Vtlie~~~ 63 (123)
T d1nhpa2 26 VDPEVNNVVVIGS-GYIGIEAAEAFAKAGKKVTVIDILD 63 (123)
T ss_dssp TCTTCCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred hccCCCEEEEECC-hHHHHHHHHHhhccceEEEEEEecC
Confidence 3345679999997 9999999999999999999998764
|
| >d1sc6a1 c.2.1.4 (A:108-295) Phosphoglycerate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Formate/glycerate dehydrogenases, NAD-domain domain: Phosphoglycerate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=92.06 E-value=0.36 Score=36.29 Aligned_cols=85 Identities=21% Similarity=0.178 Sum_probs=59.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
.+.+|.|+|. |.+|...+++++.+|.+|+...+...+ . ......+. ++.+.+++ .|++.-+..
T Consensus 43 ~~~~vgiiG~-G~IG~~va~~l~~fg~~v~~~d~~~~~------~--~~~~~~~~---~l~ell~~-----sDii~i~~p 105 (188)
T d1sc6a1 43 RGKKLGIIGY-GHIGTQLGILAESLGMYVYFYDIENKL------P--LGNATQVQ---HLSDLLNM-----SDVVSLHVP 105 (188)
T ss_dssp TTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSCCC------C--CTTCEECS---CHHHHHHH-----CSEEEECCC
T ss_pred cceEEEEeec-ccchhhhhhhcccccceEeeccccccc------h--hhhhhhhh---hHHHHHhh-----ccceeeccc
Confidence 5789999996 999999999999999999999865432 1 11112221 34444443 688877665
Q ss_pred h-h-----hHHHHHHhhhhCCEEEEEce
Q 019332 232 G-K-----MLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~-~-----~~~~~~~~l~~~G~~v~~g~ 253 (342)
- + .-...++.++++..+|.++.
T Consensus 106 lt~~T~~li~~~~l~~mk~~a~lIN~aR 133 (188)
T d1sc6a1 106 ENPSTKNMMGAKEISLMKPGSLLINASR 133 (188)
T ss_dssp SSTTTTTCBCHHHHHHSCTTEEEEECSC
T ss_pred CCcchhhhccHHHHhhCCCCCEEEEcCc
Confidence 3 2 23567788888888888764
|
| >d1ps9a3 c.4.1.1 (A:331-465,A:628-671) 2,4-dienoyl-CoA reductase, middle domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: 2,4-dienoyl-CoA reductase, middle domain species: Escherichia coli [TaxId: 562]
Probab=92.04 E-value=0.12 Score=38.76 Aligned_cols=38 Identities=18% Similarity=0.105 Sum_probs=33.3
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.....+|+|.|| |+.|+.|+..+...|.+|++...+++
T Consensus 40 ~~~~k~V~IIGa-GPAGL~AA~~la~~G~~Vtl~E~~~~ 77 (179)
T d1ps9a3 40 AVQKKNLAVVGA-GPAGLAFAINAAARGHQVTLFDAHSE 77 (179)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSSS
T ss_pred CCCCcEEEEECc-cHHHHHHHHHHHhhccceEEEeccCc
Confidence 355689999997 99999999999999999999997653
|
| >d1wxxa2 c.66.1.51 (A:65-382) Hypothetical protein TTHA1280, middle and C-terminal domains {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein TTHA1280, middle and C-terminal domains species: Thermus thermophilus [TaxId: 274]
Probab=92.04 E-value=0.17 Score=41.75 Aligned_cols=98 Identities=16% Similarity=0.104 Sum_probs=58.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCCe--eEecCCchhHHHHHHHHCCCCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFDE--AFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~~--v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
.+|++||=.++ +.|..++.+|+ .+++|++++.++...+.+++ ..|.+. ++..+.. ++.+.+.+ .++.||+
T Consensus 144 ~~g~rVLDl~~--gtG~~s~~~a~-g~~~V~~vD~s~~al~~a~~n~~~ngl~~~~~i~~d~~-~~~~~~~~-~~~~fD~ 218 (318)
T d1wxxa2 144 FRGERALDVFS--YAGGFALHLAL-GFREVVAVDSSAEALRRAEENARLNGLGNVRVLEANAF-DLLRRLEK-EGERFDL 218 (318)
T ss_dssp CCEEEEEEETC--TTTHHHHHHHH-HEEEEEEEESCHHHHHHHHHHHHHTTCTTEEEEESCHH-HHHHHHHH-TTCCEEE
T ss_pred hCCCeeeccCC--CCcHHHHHHHh-cCCcEEeecchHHHHHHHHHHHHHcCCCCcceeeccHH-HHhhhhHh-hhcCCCE
Confidence 46889987764 33444555554 35699999999988877764 235432 2332222 33333322 1237998
Q ss_pred EE-eC--CC--h-----------hhHHHHHHhhhhCCEEEEEce
Q 019332 226 YF-EN--VG--G-----------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 226 vi-d~--~g--~-----------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
|+ |. .+ . +.+..++++|+|||.++.+..
T Consensus 219 Vi~DpP~~~~~~~~~~~~~~~~~~l~~~a~~lLkpGG~Lv~~sc 262 (318)
T d1wxxa2 219 VVLDPPAFAKGKKDVERAYRAYKEVNLRAIKLLKEGGILATASC 262 (318)
T ss_dssp EEECCCCSCCSTTSHHHHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred EEEcCCccccchHHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 76 32 11 1 134567889999999987655
|
| >d3etja2 c.30.1.1 (A:1-78) N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PreATP-grasp domain superfamily: PreATP-grasp domain family: BC N-terminal domain-like domain: N5-carboxyaminoimidazole ribonucleotide synthetase PurK (AIRC), N-domain species: Escherichia coli [TaxId: 562]
Probab=91.73 E-value=0.095 Score=33.23 Aligned_cols=35 Identities=20% Similarity=0.250 Sum_probs=30.9
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDK 189 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~ 189 (342)
.+|.|.|+ |-.|.+.++-++.+|.++++.+.+++-
T Consensus 2 k~vgIlG~-GQLgrMl~~Aa~~LG~~v~vldp~~~~ 36 (78)
T d3etja2 2 KQVCVLGN-GQLGRMLRQAGEPLGIAVWPVGLDAEP 36 (78)
T ss_dssp EEEEEEBC-SHHHHHHHHHHGGGTEEEEEECTTSCG
T ss_pred CEEEEEcC-CHHHHHHHHHHHHcCCEEEEEcCCCCC
Confidence 47999997 999999999999999999999976543
|
| >d2voua1 c.3.1.2 (A:2-163,A:292-394) Dihydroxypyridine hydroxylase DhpH {Arthrobacter nicotinovorans [TaxId: 29320]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Dihydroxypyridine hydroxylase DhpH species: Arthrobacter nicotinovorans [TaxId: 29320]
Probab=91.65 E-value=0.11 Score=41.08 Aligned_cols=34 Identities=12% Similarity=0.024 Sum_probs=29.8
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.++|+|+|| |..|++++..++..|.+|+++.+++
T Consensus 4 ~~kV~IiGa-G~aGl~~A~~L~~~G~~v~v~Er~~ 37 (265)
T d2voua1 4 TDRIAVVGG-SISGLTAALMLRDAGVDVDVYERSP 37 (265)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCcEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 578999997 9999998888888899999998653
|
| >d1uira_ c.66.1.17 (A:) Spermidine synthase {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermus thermophilus [TaxId: 274]
Probab=91.64 E-value=0.2 Score=41.23 Aligned_cols=96 Identities=18% Similarity=0.187 Sum_probs=60.6
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc-----CC--CeeEecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF-----GF--DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~-----g~--~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
..++|||.|+ |.|..+-.+++.... +|.++..+++=.+.+++-+ +. +.-+...-. |..+.+++ +++.+
T Consensus 77 ~pk~VLiiG~--G~G~~~~~ll~~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~d~rv~i~~~-Da~~~l~~-~~~~y 152 (312)
T d1uira_ 77 EPKRVLIVGG--GEGATLREVLKHPTVEKAVMVDIDGELVEVAKRHMPEWHQGAFDDPRAVLVID-DARAYLER-TEERY 152 (312)
T ss_dssp CCCEEEEEEC--TTSHHHHHHTTSTTCCEEEEEESCHHHHHHHHHHCHHHHTTGGGCTTEEEEES-CHHHHHHH-CCCCE
T ss_pred CcceEEEeCC--CchHHHHHHHhcCCcceEEEecCCHHHHHHHHhcCcccccCccCCCceEEEEc-hHHHHhhh-cCCcc
Confidence 4468999995 557777777777654 9999999988777776323 11 111111111 44455554 44479
Q ss_pred cEEE-eC---CC---------h-hhHHHHHHhhhhCCEEEEE
Q 019332 224 DIYF-EN---VG---------G-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 224 d~vi-d~---~g---------~-~~~~~~~~~l~~~G~~v~~ 251 (342)
|+|| |. .+ + +.+..+.++|+++|.++.-
T Consensus 153 DvIi~D~~dp~~~~~~~~~L~t~eF~~~~~~~L~p~Gvlv~~ 194 (312)
T d1uira_ 153 DVVIIDLTDPVGEDNPARLLYTVEFYRLVKAHLNPGGVMGMQ 194 (312)
T ss_dssp EEEEEECCCCBSTTCGGGGGSSHHHHHHHHHTEEEEEEEEEE
T ss_pred cEEEEeCCCcccccchhhhhhhHHHHHHHHHhcCCCceEEEe
Confidence 9875 43 22 1 3567888999999988753
|
| >d1d7ya2 c.3.1.5 (A:116-236) NADH-dependent ferredoxin reductase, BphA4 {Pseudomonas sp., KKS102 [TaxId: 306]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH-dependent ferredoxin reductase, BphA4 species: Pseudomonas sp., KKS102 [TaxId: 306]
Probab=91.63 E-value=0.18 Score=34.97 Aligned_cols=67 Identities=21% Similarity=0.319 Sum_probs=46.0
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEE
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYF 227 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vi 227 (342)
.++++.+++|.|| |.+|.-++..++..|.+|+.+.+++.= +. ..+ +. ...+.+++.... |+++..
T Consensus 26 ~~~~~~~vvIIGg-G~iG~E~A~~l~~~g~~Vtli~~~~~~-------l~--~~~---~~-~~~~~~~~~l~~~GV~i~~ 91 (121)
T d1d7ya2 26 GLRPQSRLLIVGG-GVIGLELAATARTAGVHVSLVETQPRL-------MS--RAA---PA-TLADFVARYHAAQGVDLRF 91 (121)
T ss_dssp HCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSSST-------TT--TTS---CH-HHHHHHHHHHHTTTCEEEE
T ss_pred hhhcCCeEEEECc-chhHHHHHHHhhcccceEEEEeecccc-------cc--ccC---CH-HHHHHHHHHHHHCCcEEEe
Confidence 3567889999997 999998888888999999999977531 11 001 12 445555554434 677776
Q ss_pred eC
Q 019332 228 EN 229 (342)
Q Consensus 228 d~ 229 (342)
+.
T Consensus 92 ~~ 93 (121)
T d1d7ya2 92 ER 93 (121)
T ss_dssp SC
T ss_pred CC
Confidence 54
|
| >d1iy9a_ c.66.1.17 (A:) Spermidine synthase {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Bacillus subtilis [TaxId: 1423]
Probab=91.61 E-value=0.19 Score=40.49 Aligned_cols=92 Identities=16% Similarity=0.161 Sum_probs=61.5
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc-----CC--C---eeEecCCchhHHHHHHHHCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF-----GF--D---EAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~-----g~--~---~v~~~~~~~~~~~~i~~~~~ 220 (342)
..++|||.| ||-|..+-.+++..+. +|.++..+++=.+.++ ++ ++ + .++.. |..+.+++ ++
T Consensus 75 ~p~~vLiiG--gG~G~~~~~~l~~~~~~~i~~VEID~~Vi~~a~-~~~~~~~~~~~d~r~~i~~~----D~~~~l~~-~~ 146 (274)
T d1iy9a_ 75 NPEHVLVVG--GGDGGVIREILKHPSVKKATLVDIDGKVIEYSK-KFLPSIAGKLDDPRVDVQVD----DGFMHIAK-SE 146 (274)
T ss_dssp SCCEEEEES--CTTCHHHHHHTTCTTCSEEEEEESCHHHHHHHH-HHCHHHHTTTTSTTEEEEES----CSHHHHHT-CC
T ss_pred CcceEEecC--CCCcHHHHHHHhcCCcceEEEecCCHHHHHHHH-HhChhhcccccCCCeEEEec----hHHHHHhh-cC
Confidence 447899999 4557777788887765 9999999988777776 43 22 1 12222 33344443 33
Q ss_pred CCccEEE-eCCC---------h-hhHHHHHHhhhhCCEEEEE
Q 019332 221 EGIDIYF-ENVG---------G-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 221 ~~~d~vi-d~~g---------~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.+|+|+ |... + +.+..+.++|+++|.++.-
T Consensus 147 ~~yDvIi~D~~~p~~~~~~L~t~eFy~~~~~~L~~~Gv~v~q 188 (274)
T d1iy9a_ 147 NQYDVIMVDSTEPVGPAVNLFTKGFYAGIAKALKEDGIFVAQ 188 (274)
T ss_dssp SCEEEEEESCSSCCSCCCCCSTTHHHHHHHHHEEEEEEEEEE
T ss_pred CCCCEEEEcCCCCCCcchhhccHHHHHHHHhhcCCCceEEEe
Confidence 4799875 4322 2 4688899999999998864
|
| >d2o07a1 c.66.1.17 (A:16-300) Spermidine synthase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.57 E-value=0.15 Score=41.40 Aligned_cols=95 Identities=19% Similarity=0.195 Sum_probs=59.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcC-----C--CeeEecCCchhHHHHHHHHCCCCc
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFG-----F--DEAFNYKEEPDLNEALKRYFPEGI 223 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g-----~--~~v~~~~~~~~~~~~i~~~~~~~~ 223 (342)
..++|||.| ||-|..+-.+++..+. +|.++..+++=.+.++ ++- . +..++..-. |..+-+++ +.+.+
T Consensus 78 ~pk~vLiiG--gG~G~~~~~~l~~~~~~~v~~vEiD~~Vv~~a~-~~~~~~~~~~~d~rv~i~~~-Da~~~l~~-~~~~y 152 (285)
T d2o07a1 78 NPRKVLIIG--GGDGGVLREVVKHPSVESVVQCEIDEDVIQVSK-KFLPGMAIGYSSSKLTLHVG-DGFEFMKQ-NQDAF 152 (285)
T ss_dssp SCCEEEEEE--CTTSHHHHHHTTCTTCCEEEEEESCHHHHHHHH-HHCHHHHGGGGCTTEEEEES-CHHHHHHT-CSSCE
T ss_pred CcCeEEEeC--CCchHHHHHHHHcCCcceeeeccCCHHHHHHHH-hhchhhccccCCCCceEEEc-cHHHHHhc-CCCCC
Confidence 447899999 4556667777777665 8999998887777776 331 1 111111111 33444543 34479
Q ss_pred cEEE-eCCC---------h-hhHHHHHHhhhhCCEEEEE
Q 019332 224 DIYF-ENVG---------G-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 224 d~vi-d~~g---------~-~~~~~~~~~l~~~G~~v~~ 251 (342)
|+|+ |+.. + +.+..+.++|+++|.++.-
T Consensus 153 DvIi~D~~~p~~~~~~L~t~eF~~~~~~~L~~~Gi~v~q 191 (285)
T d2o07a1 153 DVIITDSSDPMGPAESLFKESYYQLMKTALKEDGVLCCQ 191 (285)
T ss_dssp EEEEEECC-----------CHHHHHHHHHEEEEEEEEEE
T ss_pred CEEEEcCCCCCCcccccccHHHHHHHHHhcCCCCeEEEe
Confidence 9875 4332 1 3578888999999998764
|
| >d1f0ya2 c.2.1.6 (A:12-203) Short chain L-3-hydroxyacyl CoA dehydrogenase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Short chain L-3-hydroxyacyl CoA dehydrogenase species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.53 E-value=0.22 Score=37.77 Aligned_cols=40 Identities=25% Similarity=0.240 Sum_probs=34.6
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
.+|.|.|+ |.+|...++++...|.+|+..+++++..+.+.
T Consensus 5 kkvaViGa-G~mG~~iA~~~a~~G~~V~l~D~~~~~l~~a~ 44 (192)
T d1f0ya2 5 KHVTVIGG-GLMGAGIAQVAAATGHTVVLVDQTEDILAKSK 44 (192)
T ss_dssp CEEEEECC-SHHHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEEECc-CHHHHHHHHHHHhCCCcEEEEECChHHHHHHH
Confidence 47999997 99999999999999999999999987665544
|
| >d1diha1 c.2.1.3 (A:2-130,A:241-273) Dihydrodipicolinate reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Dihydrodipicolinate reductase species: Escherichia coli [TaxId: 562]
Probab=91.46 E-value=0.026 Score=41.89 Aligned_cols=92 Identities=20% Similarity=0.156 Sum_probs=56.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcC----CC--eeEecCCchhHHHHHHHHCCCCccEEE
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFG----FD--EAFNYKEEPDLNEALKRYFPEGIDIYF 227 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g----~~--~v~~~~~~~~~~~~i~~~~~~~~d~vi 227 (342)
+|.|+|++|-+|++.++++... ++++++...++.....-+ .+| .. .+..+.+ + .+ ....+|+++
T Consensus 6 kI~i~Ga~GrMG~~i~~~i~~~~~~~lv~~~~~~~~~~~g~-d~~~~~~~~~~~~~~~~~---~----~~-~~~~~DViI 76 (162)
T d1diha1 6 RVAIAGAGGRMGRQLIQAALALEGVQLGAALEREGSSLLGS-DAGELAGAGKTGVTVQSS---L----DA-VKDDFDVFI 76 (162)
T ss_dssp EEEETTTTSHHHHHHHHHHHHSTTEECCCEECCTTCTTCSC-CTTCSSSSSCCSCCEESC---S----TT-TTTSCSEEE
T ss_pred EEEEECCCCHHHHHHHHHHHhCCCCEEEEEEecccchhccc-hhhhhhccccCCceeecc---H----HH-HhcccceEE
Confidence 6899999999999999988765 667776554332210000 111 10 0000111 0 01 112589999
Q ss_pred eCCChhhHHHHHHhhhhCCEEEEEceec
Q 019332 228 ENVGGKMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 228 d~~g~~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
|+.-.+.....++.....|.=+.+|+++
T Consensus 77 DFs~p~~~~~~~~~a~~~~~~~ViGTTG 104 (162)
T d1diha1 77 DFTRPEGTLNHLAFCRQHGKGMVIGTTG 104 (162)
T ss_dssp ECSCHHHHHHHHHHHHHTTCEEEECCCC
T ss_pred EeccHHHHHHHHHHHHhccceeEEecCC
Confidence 9999877777777777777767778654
|
| >d1ws6a1 c.66.1.46 (A:15-185) Methyltransferase TTHA0928 {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: YhhF-like domain: Methyltransferase TTHA0928 species: Thermus thermophilus [TaxId: 274]
Probab=91.43 E-value=1.3 Score=32.44 Aligned_cols=97 Identities=14% Similarity=0.089 Sum_probs=53.4
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH---HcCCC-eeEecCCchhHHHHHHHHCCCCcc
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN---KFGFD-EAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~---~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
++.+|.+||=.++ |.|..++..+ ..|++|+.+..+++-.+.+++ .++.. .+...+.. .+... .....+.+|
T Consensus 38 ~~~~g~~vLDl~~--G~G~~~i~a~-~~ga~vv~vD~~~~a~~~~~~N~~~~~~~~~v~~~~~d-~~~~~-~~~~~~~fD 112 (171)
T d1ws6a1 38 RYPRRGRFLDPFA--GSGAVGLEAA-SEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVE-VFLPE-AKAQGERFT 112 (171)
T ss_dssp HCTTCCEEEEETC--SSCHHHHHHH-HTTCEEEEECCCHHHHHHHHHHHHHHTCCCEEECSCHH-HHHHH-HHHTTCCEE
T ss_pred cccCCCeEEEecc--ccchhhhhhh-hccchhhhcccCHHHHhhhhHHHHhhccccceeeeehh-ccccc-ccccCCccc
Confidence 4677888876653 3333334433 458999999988887766653 45553 44333322 22222 223334799
Q ss_pred EEE-eC---CCh-hhHHHHH--HhhhhCCEEEE
Q 019332 225 IYF-EN---VGG-KMLDAVL--LNMKIHGRIAV 250 (342)
Q Consensus 225 ~vi-d~---~g~-~~~~~~~--~~l~~~G~~v~ 250 (342)
+|| |. .+- ..+...+ ..++++|.++.
T Consensus 113 ~If~DPPY~~~~~~~l~~l~~~~ll~~~g~ivi 145 (171)
T d1ws6a1 113 VAFMAPPYAMDLAALFGELLASGLVEAGGLYVL 145 (171)
T ss_dssp EEEECCCTTSCTTHHHHHHHHHTCEEEEEEEEE
T ss_pred eeEEccccccCHHHHHHHHHHcCCcCCCeEEEE
Confidence 986 32 122 3333333 25788887664
|
| >d1tlta1 c.2.1.3 (A:5-127,A:268-308) Virulence factor MviM {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Virulence factor MviM species: Escherichia coli [TaxId: 562]
Probab=91.38 E-value=1.8 Score=31.23 Aligned_cols=83 Identities=12% Similarity=0.091 Sum_probs=53.2
Q ss_pred EEEEecCCcHHHHH-HHHHHHHc-CCEEEEEeC-ChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQL-VGQFAKLL-GCYVVGSAG-SKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~-ai~la~~~-ga~Vi~~~~-s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|.|.|. |.+|.- .+...+.. ++++++++. ++++...+.++++... ++ ++. .+. ..+|+|+.|..
T Consensus 3 ri~iIG~-G~~g~~~~~~~l~~~~~~~i~~v~d~~~~~~~~~~~~~~~~~-~~-----~~~-~l~----~~~D~V~I~tp 70 (164)
T d1tlta1 3 RIGVVGL-GGIAQKAWLPVLAAASDWTLQGAWSPTRAKALPICESWRIPY-AD-----SLS-SLA----ASCDAVFVHSS 70 (164)
T ss_dssp EEEEECC-STHHHHTHHHHHHSCSSEEEEEEECSSCTTHHHHHHHHTCCB-CS-----SHH-HHH----TTCSEEEECSC
T ss_pred EEEEEcC-CHHHHHHHHHHHHhCCCcEEEEEEechhHhhhhhhhcccccc-cc-----cch-hhh----hhccccccccc
Confidence 5889995 888863 55655544 678887764 4555555544777642 21 222 222 23899998888
Q ss_pred h-hhHHHHHHhhhhCCEEE
Q 019332 232 G-KMLDAVLLNMKIHGRIA 249 (342)
Q Consensus 232 ~-~~~~~~~~~l~~~G~~v 249 (342)
. ...+.+..+|+.+-.++
T Consensus 71 ~~~h~~~~~~al~~gk~V~ 89 (164)
T d1tlta1 71 TASHFDVVSTLLNAGVHVC 89 (164)
T ss_dssp TTHHHHHHHHHHHTTCEEE
T ss_pred chhccccccccccccceee
Confidence 7 66777778887776644
|
| >d2ex4a1 c.66.1.42 (A:2-224) Adrenal gland protein AD-003 (C9orf32) {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: AD-003 protein-like domain: Adrenal gland protein AD-003 (C9orf32) species: Human (Homo sapiens) [TaxId: 9606]
Probab=91.35 E-value=0.15 Score=39.59 Aligned_cols=98 Identities=15% Similarity=0.164 Sum_probs=63.8
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC--eeEecCCchhHHHHHHHHC--CCCcc
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD--EAFNYKEEPDLNEALKRYF--PEGID 224 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~--~v~~~~~~~~~~~~i~~~~--~~~~d 224 (342)
...++.+||=.| .|.|..+..+++..+.+|++++.|++-.+.+++.+... ..+.+... ++ .++. .+.+|
T Consensus 57 ~~~~~~~vLDiG--cG~G~~~~~l~~~~~~~v~~vD~s~~~l~~ak~~~~~~~~~~~~f~~~-d~----~~~~~~~~~fD 129 (222)
T d2ex4a1 57 NKTGTSCALDCG--AGIGRITKRLLLPLFREVDMVDITEDFLVQAKTYLGEEGKRVRNYFCC-GL----QDFTPEPDSYD 129 (222)
T ss_dssp -CCCCSEEEEET--CTTTHHHHHTTTTTCSEEEEEESCHHHHHHHHHHTGGGGGGEEEEEEC-CG----GGCCCCSSCEE
T ss_pred CCCCCCEEEEec--cCCCHhhHHHHHhcCCEEEEeecCHHHhhccccccccccccccccccc-cc----ccccccccccc
Confidence 456778999998 57788888888777779999999998888887433221 11122111 11 1122 23689
Q ss_pred EEEeCCC-----h----hhHHHHHHhhhhCCEEEEEce
Q 019332 225 IYFENVG-----G----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 225 ~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+|+.... . ..+..+.+.|+++|.++....
T Consensus 130 ~I~~~~~l~h~~~~~~~~~l~~i~~~Lk~~G~~~i~~~ 167 (222)
T d2ex4a1 130 VIWIQWVIGHLTDQHLAEFLRRCKGSLRPNGIIVIKDN 167 (222)
T ss_dssp EEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEE
T ss_pred ccccccccccchhhhhhhHHHHHHHhcCCcceEEEEEc
Confidence 9876322 2 246678889999999987654
|
| >d1v9la1 c.2.1.7 (A:180-421) Glutamate dehydrogenase {Pyrobaculum islandicum [TaxId: 2277]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Pyrobaculum islandicum [TaxId: 2277]
Probab=91.32 E-value=0.23 Score=39.15 Aligned_cols=35 Identities=23% Similarity=0.407 Sum_probs=31.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
-.|.+|+|.|. |.+|..+++++...|++|++++.+
T Consensus 29 l~g~~v~IqGf-GnVG~~~a~~L~~~Gakvv~vsD~ 63 (242)
T d1v9la1 29 IEGKTVAIQGM-GNVGRWTAYWLEKMGAKVIAVSDI 63 (242)
T ss_dssp CTTCEEEEECC-SHHHHHHHHHHHTTTCEEEEEECS
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEeecc
Confidence 47889999996 999999999999999999988854
|
| >d1mjfa_ c.66.1.17 (A:) Putative spermidine synthetase PF0127 (SpeE) {Archaeon Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Putative spermidine synthetase PF0127 (SpeE) species: Archaeon Pyrococcus furiosus [TaxId: 2261]
Probab=91.28 E-value=0.29 Score=39.36 Aligned_cols=96 Identities=16% Similarity=0.091 Sum_probs=57.7
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC------------CeeEecCCchhHHHHHHHH
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF------------DEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~------------~~v~~~~~~~~~~~~i~~~ 218 (342)
.+..+|||.|+ |-|..+-.+++....+|.++..+++=.+.+++-++. +..+..... |..+.+++
T Consensus 71 ~~p~~vLiiG~--G~G~~~~~~l~~~~~~v~~VEiD~~Vi~~a~~~f~~~~~~~~~~~~~~d~rv~i~~~-Da~~~l~~- 146 (276)
T d1mjfa_ 71 PKPKRVLVIGG--GDGGTVREVLQHDVDEVIMVEIDEDVIMVSKDLIKIDNGLLEAMLNGKHEKAKLTIG-DGFEFIKN- 146 (276)
T ss_dssp SCCCEEEEEEC--TTSHHHHHHTTSCCSEEEEEESCHHHHHHHHHHTCTTTTHHHHHHTTCCSSEEEEES-CHHHHHHH-
T ss_pred CCCceEEEecC--CchHHHHHHHHhCCceEEEecCCHHHHHHHHHhhhhccchhhhhhccCCCCceEEEC-hHHHHHhc-
Confidence 34578999995 445555555665445899999888766777632221 111111111 33444543
Q ss_pred CCCCccEEE-eCCCh----------hhHHHHHHhhhhCCEEEEE
Q 019332 219 FPEGIDIYF-ENVGG----------KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 219 ~~~~~d~vi-d~~g~----------~~~~~~~~~l~~~G~~v~~ 251 (342)
.+.+|+|| |+... +.+..+.++|+++|.++.-
T Consensus 147 -~~~yDvIi~D~~~~~~~~~~L~t~eF~~~~~~~L~~~Gv~v~q 189 (276)
T d1mjfa_ 147 -NRGFDVIIADSTDPVGPAKVLFSEEFYRYVYDALNNPGIYVTQ 189 (276)
T ss_dssp -CCCEEEEEEECCCCC-----TTSHHHHHHHHHHEEEEEEEEEE
T ss_pred -cCCCCEEEEeCCCCCCCcccccCHHHHHhhHhhcCCCceEEEe
Confidence 34799875 44331 3578899999999998753
|
| >d1v59a2 c.3.1.5 (A:161-282) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=91.26 E-value=0.18 Score=34.99 Aligned_cols=34 Identities=21% Similarity=0.174 Sum_probs=30.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
..+++|.|| |.+|+-+++.+..+|.+|.++.+++
T Consensus 23 p~~~vIiG~-G~ig~E~A~~l~~lG~~Vtii~~~~ 56 (122)
T d1v59a2 23 PKRLTIIGG-GIIGLEMGSVYSRLGSKVTVVEFQP 56 (122)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCeEEEECC-CchHHHHHHHHHhhCcceeEEEecc
Confidence 368999997 9999999999999999999999764
|
| >d2cvoa1 c.2.1.3 (A:68-218,A:384-415) Putative semialdehyde dehydrogenase {Rice (Oryza sativa) [TaxId: 4530]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Putative semialdehyde dehydrogenase species: Rice (Oryza sativa) [TaxId: 4530]
Probab=91.25 E-value=0.059 Score=40.74 Aligned_cols=91 Identities=10% Similarity=-0.009 Sum_probs=55.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcCC----CeeEecCCchhHHHHHHHHCCCCccEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFGF----DEAFNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g~----~~v~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
=+|.|.||+|-+|+-.++++..+- .++..+.++...-..+. +... ........ . .+....++|++|-
T Consensus 6 ikVaIlGATGyvG~elirLL~~HP~~ei~~l~S~~~aG~~~~-~~~~~~~~~~~~~~~~---~----~~~~~~~~Dvvf~ 77 (183)
T d2cvoa1 6 VRIAVLGASGYTGAEIVRLLANHPQFRIKVMTADRKAGEQFG-SVFPHLITQDLPNLVA---V----KDADFSNVDAVFC 77 (183)
T ss_dssp EEEEEESCSSHHHHHHHHHHTTCSSEEEEEEECSTTTTSCHH-HHCGGGTTSCCCCCBC---G----GGCCGGGCSEEEE
T ss_pred cEEEEECcccHHHHHHHHHHHhCCCceEEEEeccccCCCccc-cccccccccccccchh---h----hhhhhcccceeee
Confidence 368999999999999999998764 47776664433222222 1111 00000000 0 0000125899999
Q ss_pred CCChhhHHHHHHhhhhCCEEEEEc
Q 019332 229 NVGGKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G~~v~~g 252 (342)
|............+...+.++...
T Consensus 78 alp~~~s~~~~~~l~~~~~~v~~~ 101 (183)
T d2cvoa1 78 CLPHGTTQEIIKGLPQELKIVDLS 101 (183)
T ss_dssp CCSSSHHHHHHHTSCSSCEEEECS
T ss_pred ccccchHHHHHHHHHhcCcccccc
Confidence 999866666667888888877654
|
| >d3lada2 c.3.1.5 (A:159-277) Dihydrolipoamide dehydrogenase {Azotobacter vinelandii [TaxId: 354]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Azotobacter vinelandii [TaxId: 354]
Probab=91.12 E-value=0.21 Score=34.50 Aligned_cols=46 Identities=15% Similarity=0.144 Sum_probs=36.2
Q ss_pred hhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 138 ~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.++..+| +.. +..++++|.|+ |.+|+-+++.++.+|.+|.++.+++
T Consensus 10 ~~s~~~l-~l~--~~p~~i~IiG~-G~ig~E~A~~l~~~G~~Vtiv~~~~ 55 (119)
T d3lada2 10 VDSTGAL-DFQ--NVPGKLGVIGA-GVIGLELGSVWARLGAEVTVLEAMD 55 (119)
T ss_dssp EEHHHHT-SCS--SCCSEEEEECC-SHHHHHHHHHHHHTTCEEEEEESSS
T ss_pred EchhHhh-Ccc--cCCCeEEEECC-ChHHHHHHHHHHHcCCceEEEEeec
Confidence 4566666 322 23478999997 9999999999999999999999764
|
| >d1gesa2 c.3.1.5 (A:147-262) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=91.05 E-value=0.17 Score=34.79 Aligned_cols=34 Identities=24% Similarity=0.128 Sum_probs=30.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.++|+|.|+ |.+|+-+++.++.+|.+|.++.+++
T Consensus 21 p~~vvIiGg-G~ig~E~A~~l~~~G~~Vtlve~~~ 54 (116)
T d1gesa2 21 PERVAVVGA-GYIGVELGGVINGLGAKTHLFEMFD 54 (116)
T ss_dssp CSEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCEEEEECC-ChhhHHHHHHhhccccEEEEEeecc
Confidence 368999997 9999999999999999999998765
|
| >d2dula1 c.66.1.58 (A:3-377) N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 {Pyrococcus horikoshii [TaxId: 53953]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TRM1-like domain: N(2),N(2)-dimethylguanosine tRNA methyltransferase Trm1 species: Pyrococcus horikoshii [TaxId: 53953]
Probab=91.01 E-value=0.59 Score=39.30 Aligned_cols=92 Identities=22% Similarity=0.177 Sum_probs=61.7
Q ss_pred cCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc---CCCe--------------eEecCCchhHHHHHHHHCCC
Q 019332 160 AASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF---GFDE--------------AFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 160 ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~---g~~~--------------v~~~~~~~~~~~~i~~~~~~ 221 (342)
.+-++.|...+++|+..|+ +|++.+.+++-.+.+++.+ +... .+..... |....+.+ .+.
T Consensus 51 D~~sasG~rsiRya~E~~~~~V~~nDis~~A~~~i~~N~~lN~~~~~~~~~~~~~~~~~~~~~~~~~-Da~~~~~~-~~~ 128 (375)
T d2dula1 51 DALSATGIRGIRFALETPAEEVWLNDISEDAYELMKRNVMLNFDGELRESKGRAILKGEKTIVINHD-DANRLMAE-RHR 128 (375)
T ss_dssp ESSCTTSHHHHHHHHHSSCSEEEEEESCHHHHHHHHHHHHHHCCSCCEECSSEEEEESSSEEEEEES-CHHHHHHH-STT
T ss_pred EcCCCccHHHHHHHHhCCCCEEEEecCCHHHHHHHHHHHHhcCccccccccccccccccceeEeehh-hhhhhhHh-hcC
Confidence 3347778899999998888 8999999998887776432 1111 0111111 22223322 233
Q ss_pred CccEE-EeCCCh--hhHHHHHHhhhhCCEEEEEce
Q 019332 222 GIDIY-FENVGG--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 ~~d~v-id~~g~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
.+|+| ||..|+ +.++.++++++.+|-+..+.+
T Consensus 129 ~fDvIDiDPfGs~~pfldsAi~a~~~~Gll~vTaT 163 (375)
T d2dula1 129 YFHFIDLDPFGSPMEFLDTALRSAKRRGILGVTAT 163 (375)
T ss_dssp CEEEEEECCSSCCHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cCCcccCCCCCCcHHHHHHHHHHhccCCEEEEEec
Confidence 69965 999998 689999999999988776644
|
| >d2gh1a1 c.66.1.49 (A:13-293) Methyltransferase BC2162 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: BC2162-like domain: Methyltransferase BC2162 species: Bacillus cereus [TaxId: 1396]
Probab=90.99 E-value=0.18 Score=40.82 Aligned_cols=96 Identities=18% Similarity=0.167 Sum_probs=64.0
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc--CCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHHC-CC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL--GCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRYF-PE 221 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~--ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~~-~~ 221 (342)
.++.+..+||=.| .|.|..+..+++.. +++|++++.+++-.+.+++.+ +.. +++... +. .+.. .+
T Consensus 23 ~~~~~~~~ILDiG--cG~G~~~~~la~~~~~~~~v~giD~s~~~l~~a~~~~~~~~~~--~~f~~~-d~----~~~~~~~ 93 (281)
T d2gh1a1 23 WKITKPVHIVDYG--CGYGYLGLVLMPLLPEGSKYTGIDSGETLLAEARELFRLLPYD--SEFLEG-DA----TEIELND 93 (281)
T ss_dssp SCCCSCCEEEEET--CTTTHHHHHHTTTSCTTCEEEEEECCHHHHHHHHHHHHSSSSE--EEEEES-CT----TTCCCSS
T ss_pred hccCCcCEEEEec--CcCCHHHHHHHHhCCCCCEEEEEecchhHhhhhhccccccccc--cccccc-cc----ccccccC
Confidence 3567788999888 45788888999875 569999999998777776332 322 111111 11 1111 23
Q ss_pred CccEEEeCCC-----h--hhHHHHHHhhhhCCEEEEEc
Q 019332 222 GIDIYFENVG-----G--KMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 222 ~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g 252 (342)
.+|+|+-... . ..+..+.+.|+|+|.++...
T Consensus 94 ~fD~v~~~~~l~~~~d~~~~l~~~~~~LkpgG~lii~~ 131 (281)
T d2gh1a1 94 KYDIAICHAFLLHMTTPETMLQKMIHSVKKGGKIICFE 131 (281)
T ss_dssp CEEEEEEESCGGGCSSHHHHHHHHHHTEEEEEEEEEEE
T ss_pred CceEEEEehhhhcCCCHHHHHHHHHHHcCcCcEEEEEE
Confidence 6999875432 1 35788999999999988764
|
| >d2g82a1 c.2.1.3 (A:1-148,A:311-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermus aquaticus [TaxId: 271]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermus aquaticus [TaxId: 271]
Probab=90.76 E-value=1.2 Score=32.60 Aligned_cols=99 Identities=16% Similarity=0.121 Sum_probs=58.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh--hhHHHHHHHcCC-----CeeEecCCc--------hh--HHHHHHH
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK--DKIDLLKNKFGF-----DEAFNYKEE--------PD--LNEALKR 217 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~--~~~~~~~~~~g~-----~~v~~~~~~--------~~--~~~~i~~ 217 (342)
+|.|.|- |-+|..+.+.+...+.+|+++-... +...++- ++.- ...+...+. .. -.....+
T Consensus 2 kigINGf-GRIGR~~~R~l~~~~i~iv~INd~~~~~~~ayLl-~yDS~hG~~~~~v~~~~~~l~i~g~~I~~~~~~~p~~ 79 (168)
T d2g82a1 2 KVGINGF-GRIGRQVFRILHSRGVEVALINDLTDNKTLAHLL-KYDSIYHRFPGEVAYDDQYLYVDGKAIRATAVKDPKE 79 (168)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCCEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEECSSEEEETTEEEEEECCSSGGG
T ss_pred EEEEECC-cHHHHHHHHHHhcCCCEEEEECCCcchhhhhhee-ecccccCccccccccccceeEecceeEEEEecCChHH
Confidence 5889997 9999999998887788887766432 3334443 3311 000101000 00 0000111
Q ss_pred HCC-C-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceec
Q 019332 218 YFP-E-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 218 ~~~-~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
+-. . ++|+|+||.|. ...+.+..+++.+.+=|.+..+.
T Consensus 80 i~W~~~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~ 120 (168)
T d2g82a1 80 IPWAEAGVGVVIESTGVFTDADKAKAHLEGGAKKVIITAPA 120 (168)
T ss_dssp CCTGGGTEEEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred CcccccCCceeEeccccccchHHhhhhhccccceeeecccc
Confidence 111 2 79999999998 77788888898776555555443
|
| >d1kyqa1 c.2.1.11 (A:1-150) Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Siroheme synthase N-terminal domain-like domain: Bifunctional dehydrogenase/ferrochelatase Met8p, N-terminal domain species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=90.73 E-value=0.12 Score=37.52 Aligned_cols=34 Identities=15% Similarity=0.135 Sum_probs=29.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
-.|.+|||.|| |.+|..-+..+...|++|++++.
T Consensus 11 l~gkrvLViGg-G~va~~ka~~Ll~~GA~VtVvap 44 (150)
T d1kyqa1 11 LKDKRILLIGG-GEVGLTRLYKLMPTGCKLTLVSP 44 (150)
T ss_dssp CTTCEEEEEEE-SHHHHHHHHHHGGGTCEEEEEEE
T ss_pred eCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEeC
Confidence 35789999997 99999999999999999998864
|
| >d1kewa_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=90.69 E-value=0.087 Score=44.43 Aligned_cols=30 Identities=20% Similarity=0.171 Sum_probs=25.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCE-EEEEe
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCY-VVGSA 184 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~-Vi~~~ 184 (342)
+|||+||+|-+|..++..+...|.+ |+++.
T Consensus 2 kILItG~tGfIGs~l~~~L~~~g~~vv~~~d 32 (361)
T d1kewa_ 2 KILITGGAGFIGSAVVRHIIKNTQDTVVNID 32 (361)
T ss_dssp EEEEESTTSHHHHHHHHHHHHHCSCEEEEEE
T ss_pred EEEEECCCcHHHHHHHHHHHHCCCCEEEEEe
Confidence 6999999999999999888888886 44554
|
| >d1z7wa1 c.79.1.1 (A:3-322) O-acetylserine sulfhydrylase (Cysteine synthase) {Thale cress (Arabidopsis thaliana) [TaxId: 3702]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]
Probab=90.57 E-value=1.8 Score=35.31 Aligned_cols=106 Identities=17% Similarity=0.160 Sum_probs=67.7
Q ss_pred hcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEec------------------
Q 019332 147 VCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNY------------------ 205 (342)
Q Consensus 147 ~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~------------------ 205 (342)
.+.++.+...+|...+|..|++.+..|+.+|.+++++.. +..|.+.++ .+|+.-++..
T Consensus 58 ~g~~~~~~~~vv~aSsGN~g~a~A~~a~~~g~~~~iv~p~~~~~~k~~~i~-~~Ga~vi~~~~~~~~~~~~~~~~~~~~~ 136 (320)
T d1z7wa1 58 KGLIKPGESVLIEPTSGNTGVGLAFTAAAKGYKLIITMPASMSTERRIILL-AFGVELVLTDPAKGMKGAIAKAEEILAK 136 (320)
T ss_dssp TTSCCTTTCEEEEECSSHHHHHHHHHHHHHTCEEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHHH
T ss_pred cCCCCCCCceEEeeCCchHHHHHHHHHHhhccceEEeehhhhhhhhhhhhh-ccCcceEEeeccccccccchhHHHHHHh
Confidence 355667666677777899999999999999996555543 446777777 8888533211
Q ss_pred ----------CCc-------hhHHHHHHHHCCCCccEEEeCCCh-hhHH---HHHHhhhhCCEEEEEce
Q 019332 206 ----------KEE-------PDLNEALKRYFPEGIDIYFENVGG-KMLD---AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 206 ----------~~~-------~~~~~~i~~~~~~~~d~vid~~g~-~~~~---~~~~~l~~~G~~v~~g~ 253 (342)
.+. .....++.+...+.+|.++-++|+ ..+. ..++...+.-+++-+..
T Consensus 137 ~~~~~~~~~~~~~~n~~~g~~t~~~EI~~q~~~~~D~vv~~vGgGg~~~Gi~~~~k~~~~~~~~igve~ 205 (320)
T d1z7wa1 137 TPNGYMLQQFENPANPKIHYETTGPEIWKGTGGKIDGFVSGIGTGGTITGAGKYLKEQNANVKLYGVEP 205 (320)
T ss_dssp CTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCceecccccccchHHHhhhhHHHHHHHhccCCCCEEEeCCCCCcccchhhhhhhhhhcceeeecccc
Confidence 000 013344555555568999988887 4444 33444555667765544
|
| >d1dxla2 c.3.1.5 (A:153-275) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=90.53 E-value=0.18 Score=35.09 Aligned_cols=47 Identities=13% Similarity=0.181 Sum_probs=36.4
Q ss_pred hhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 138 MTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 138 ~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.|...++ ... +..++++|.|+ |-+|+-+++..+.+|.+|.++.+++.
T Consensus 13 ~ts~~~l-~l~--~~p~~~viiG~-G~iglE~A~~~~~~G~~Vtvi~~~~~ 59 (123)
T d1dxla2 13 VSSTGAL-ALS--EIPKKLVVIGA-GYIGLEMGSVWGRIGSEVTVVEFASE 59 (123)
T ss_dssp ECHHHHT-TCS--SCCSEEEESCC-SHHHHHHHHHHHHHTCEEEEECSSSS
T ss_pred EeHHHhh-Ccc--ccCCeEEEEcc-chHHHHHHHHHHhcCCeEEEEEEccc
Confidence 4444444 222 34578999997 99999999999999999999997754
|
| >d1tw3a2 c.66.1.12 (A:99-351) Carminomycin 4-O-methyltransferase {Streptomyces peucetius [TaxId: 1950]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Carminomycin 4-O-methyltransferase species: Streptomyces peucetius [TaxId: 1950]
Probab=90.50 E-value=0.31 Score=38.54 Aligned_cols=100 Identities=14% Similarity=0.145 Sum_probs=61.8
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
....+....+||=+| +|.|..++.+++.. +.++++++.. +-.+.+++ +.|....+..... ++- +...+
T Consensus 74 ~~~d~~~~~~VLDvG--cG~G~~~~~la~~~p~~~~~~~D~~-~~~~~a~~~~~~~~~~~rv~~~~~-D~~----~~~~~ 145 (253)
T d1tw3a2 74 AAYDWTNVRHVLDVG--GGKGGFAAAIARRAPHVSATVLEMA-GTVDTARSYLKDEGLSDRVDVVEG-DFF----EPLPR 145 (253)
T ss_dssp HHSCCTTCSEEEEET--CTTSHHHHHHHHHCTTCEEEEEECT-THHHHHHHHHHHTTCTTTEEEEEC-CTT----SCCSS
T ss_pred hhcCCccCCEEEEeC--CCCCHHHHHHHHhcceeEEEEccCH-HHHHHHHHHHHHhhcccchhhccc-cch----hhccc
Confidence 445677888999998 67888999999877 5689888864 33333332 3343222222211 211 11123
Q ss_pred CccEEEeCCC-----h----hhHHHHHHhhhhCCEEEEEce
Q 019332 222 GIDIYFENVG-----G----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 ~~d~vid~~g-----~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
++|+|+-..- . ..+..+.++|+|+|+++....
T Consensus 146 ~~D~v~~~~vlh~~~d~~~~~~L~~~~~~LkPGG~l~i~e~ 186 (253)
T d1tw3a2 146 KADAIILSFVLLNWPDHDAVRILTRCAEALEPGGRILIHER 186 (253)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred chhheeeccccccCCchhhHHHHHHHHHhcCCCcEEEEEec
Confidence 6898874322 1 246788899999999987654
|
| >d1t2aa_ c.2.1.2 (A:) GDP-mannose 4,6-dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-mannose 4,6-dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.41 E-value=0.13 Score=42.68 Aligned_cols=33 Identities=24% Similarity=0.325 Sum_probs=29.6
Q ss_pred EE-EEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 155 CV-FISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 155 ~v-lI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+| ||+||+|-+|..++..+...|++|+++++..
T Consensus 2 KI~LVTG~tGfIG~~l~~~Ll~~g~~V~~i~r~~ 35 (347)
T d1t2aa_ 2 NVALITGITGQDGSYLAEFLLEKGYEVHGIVRRS 35 (347)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEECCC
T ss_pred CEEEEecCCcHHHHHHHHHHHHCcCEEEEEECCC
Confidence 46 9999999999999999988999999999754
|
| >d1n2sa_ c.2.1.2 (A:) dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) {Salmonella enterica serovar typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-6-deoxy-L-lyxo-4-hexulose reductase (RmlD) species: Salmonella enterica serovar typhimurium [TaxId: 90371]
Probab=90.39 E-value=0.14 Score=41.18 Aligned_cols=62 Identities=11% Similarity=0.254 Sum_probs=38.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|||+||+|-+|...+..+...| +++++.+.... + ..|..+...+.+.+++. ++|+||+|+|
T Consensus 2 KILItG~tGfiG~~l~~~L~~~g-~~v~~~~~~~~-------~----~~Dl~~~~~~~~~i~~~---~~D~Vih~Aa 63 (298)
T d1n2sa_ 2 NILLFGKTGQVGWELQRSLAPVG-NLIALDVHSKE-------F----CGDFSNPKGVAETVRKL---RPDVIVNAAA 63 (298)
T ss_dssp EEEEECTTSHHHHHHHHHTTTTS-EEEEECTTCSS-------S----CCCTTCHHHHHHHHHHH---CCSEEEECCC
T ss_pred EEEEECCCCHHHHHHHHHHHhCC-CEEEEECCCcc-------c----cCcCCCHHHHHHHHHHc---CCCEEEEecc
Confidence 59999999999999888776655 45555543221 1 12333331333334322 5899999987
|
| >d1sb8a_ c.2.1.2 (A:) UDP-N-acetylglucosamine 4-epimerase WbpP {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: UDP-N-acetylglucosamine 4-epimerase WbpP species: Pseudomonas aeruginosa [TaxId: 287]
Probab=90.32 E-value=0.17 Score=41.97 Aligned_cols=32 Identities=22% Similarity=0.226 Sum_probs=29.7
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
.++||+||+|-+|..++..+...|.+|+++++
T Consensus 17 k~iLVTG~tGfIGs~lv~~L~~~g~~V~~~d~ 48 (341)
T d1sb8a_ 17 KVWLITGVAGFIGSNLLETLLKLDQKVVGLDN 48 (341)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHTTCEEEEEEC
T ss_pred CEEEEecCCCHHHHHHHHHHHHCcCEEEEEEC
Confidence 57999999999999999999999999999975
|
| >d1a4ia1 c.2.1.7 (A:127-296) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Human (Homo sapiens) [TaxId: 9606]
Probab=90.15 E-value=0.49 Score=34.83 Aligned_cols=94 Identities=15% Similarity=0.119 Sum_probs=60.0
Q ss_pred cCCchhhHHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHH
Q 019332 133 LGMPGMTAYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLN 212 (342)
Q Consensus 133 l~~~~~ta~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~ 212 (342)
+|+.....+..|.+..---.|.+|+|.|-+.-+|.-+..++...|++|+...+..... .
T Consensus 19 ~PcTp~aii~lL~~~~i~l~Gk~vvVIGrS~iVGrPLa~lL~~~gatVt~~~~~t~~l---------------------~ 77 (170)
T d1a4ia1 19 IPCTPKGCLELIKETGVPIAGRHAVVVGRSKIVGAPMHDLLLWNNATVTTCHSKTAHL---------------------D 77 (170)
T ss_dssp CCHHHHHHHHHHHTTTCCCTTCEEEEECCCTTTHHHHHHHHHHTTCEEEEECTTCSSH---------------------H
T ss_pred CCChHHHHHHHHHHhCcccccceEEEEecCCccchHHHHHHHhccCceEEEecccccH---------------------H
Confidence 3433333333343333234789999999999999999999999999999877533221 1
Q ss_pred HHHHHHCCCCccEEEeCCChhhHHHHHHhhhhCCEEEEEce
Q 019332 213 EALKRYFPEGIDIYFENVGGKMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 213 ~~i~~~~~~~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~ 253 (342)
+.++ ..|+++-++|...+- --+.++++-.++.+|.
T Consensus 78 ~~~~-----~aDivi~a~G~~~~i-~~~~vk~g~iviDvgi 112 (170)
T d1a4ia1 78 EEVN-----KGDILVVATGQPEMV-KGEWIKPGAIVIDCGI 112 (170)
T ss_dssp HHHT-----TCSEEEECCCCTTCB-CGGGSCTTCEEEECCC
T ss_pred HHHh-----hccchhhcccccccc-ccccccCCCeEeccCc
Confidence 1111 267777777763321 1346777777888775
|
| >d1lvla2 c.3.1.5 (A:151-265) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=90.11 E-value=0.24 Score=33.89 Aligned_cols=33 Identities=18% Similarity=0.271 Sum_probs=29.8
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
++++|.|+ |.+|+-+++.++.+|.+|+.+.+.+
T Consensus 22 ~~vvIiGg-G~~G~E~A~~l~~~g~~Vtlve~~~ 54 (115)
T d1lvla2 22 QHLVVVGG-GYIGLELGIAYRKLGAQVSVVEARE 54 (115)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CeEEEECC-CHHHHHHHHHHhhcccceEEEeeec
Confidence 78999997 9999999999999999999998764
|
| >d1seza1 c.3.1.2 (A:13-329,A:442-497) Protoporphyrinogen oxidase {Tobacco (Nicotiana tabacum) [TaxId: 4097]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Tobacco (Nicotiana tabacum) [TaxId: 4097]
Probab=90.04 E-value=0.16 Score=41.08 Aligned_cols=34 Identities=21% Similarity=0.134 Sum_probs=29.6
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+.+|+|+|| |..|++++..++..|.+|.++..++
T Consensus 1 ~KkV~IIGa-G~aGL~aA~~La~~G~~V~vlE~~~ 34 (373)
T d1seza1 1 AKRVAVIGA-GVSGLAAAYKLKIHGLNVTVFEAEG 34 (373)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTSCEEEEECSSS
T ss_pred CCEEEEECc-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 468999997 9999999988888999999998653
|
| >d2fyta1 c.66.1.6 (A:238-548) Protein arginine N-methyltransferase 3, PRMT3 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 3, PRMT3 species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.98 E-value=0.23 Score=40.74 Aligned_cols=42 Identities=24% Similarity=0.175 Sum_probs=30.3
Q ss_pred hhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChh
Q 019332 144 FYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKD 188 (342)
Q Consensus 144 l~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~ 188 (342)
+.+...+.+|.+||-.|+ |.|..++.+|++ |+ +|+++..++.
T Consensus 27 i~~~~~~~~~~~VLDiGc--G~G~lsl~aa~~-Ga~~V~aid~s~~ 69 (311)
T d2fyta1 27 IYQNPHIFKDKVVLDVGC--GTGILSMFAAKA-GAKKVLGVDQSEI 69 (311)
T ss_dssp HHHCGGGTTTCEEEEETC--TTSHHHHHHHHT-TCSEEEEEESSTH
T ss_pred HHhccccCCcCEEEEECC--CCCHHHHHHHHc-CCCEEEEEeCHHH
Confidence 334445678999999985 366666666664 76 8999998875
|
| >d1q1ra2 c.3.1.5 (A:115-247) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=89.95 E-value=0.3 Score=34.39 Aligned_cols=38 Identities=13% Similarity=0.005 Sum_probs=33.3
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.++.+.+|+|.|+ |.+|+-++..++..|.+|..+.+++
T Consensus 31 ~~~~~k~v~VIGg-G~iG~E~A~~l~~~g~~Vtvie~~~ 68 (133)
T d1q1ra2 31 QLIADNRLVVIGG-GYIGLEVAATAIKANMHVTLLDTAA 68 (133)
T ss_dssp TCCTTCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred hhccCCEEEEECC-chHHHHHHHHHHhhCcceeeeeecc
Confidence 4567889999997 9999998888999999999999765
|
| >d3grsa2 c.3.1.5 (A:166-290) Glutathione reductase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Human (Homo sapiens) [TaxId: 9606]
Probab=89.94 E-value=0.24 Score=34.53 Aligned_cols=33 Identities=15% Similarity=0.061 Sum_probs=30.3
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.+++|.|+ |.+|+-+++.++.+|.+|+.+.+++
T Consensus 23 k~vvIvGg-G~iG~E~A~~l~~~G~~Vtlv~~~~ 55 (125)
T d3grsa2 23 GRSVIVGA-GYIAVEMAGILSALGSKTSLMIRHD 55 (125)
T ss_dssp SEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CEEEEEcC-CccHHHHHHHHhcCCcEEEEEeecc
Confidence 68999997 9999999999999999999999865
|
| >d2hjsa1 c.2.1.3 (A:3-129,A:320-336) Usg-1 protein homolog PA3116 {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Usg-1 protein homolog PA3116 species: Pseudomonas aeruginosa [TaxId: 287]
Probab=89.94 E-value=0.084 Score=38.09 Aligned_cols=89 Identities=10% Similarity=0.019 Sum_probs=50.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHc---CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL---GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVG 231 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~---ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g 231 (342)
+|.|.||+|-+|+-.++++... ..++...+++....+.+. +.... +...+ . ......++|++|-|.+
T Consensus 4 nVaIvGATGyvG~eli~lL~~~~hP~~~l~~~~s~~~~Gk~i~--~~~~~-~~~~~---~----~~~~~~~~d~vf~a~p 73 (144)
T d2hjsa1 4 NVAVVGATGSVGEALVGLLDERDFPLHRLHLLASAESAGQRMG--FAESS-LRVGD---V----DSFDFSSVGLAFFAAA 73 (144)
T ss_dssp CEEEETTTSHHHHHHHHHHHHTTCCCSCEEEEECTTTTTCEEE--ETTEE-EECEE---G----GGCCGGGCSEEEECSC
T ss_pred EEEEECCCCHHHHHHHHHHHhcCCCceEEEEEeecccCCccee--ecccc-chhcc---c----hhhhhccceEEEecCC
Confidence 5899999999999999999643 347776665443211111 11111 10100 0 0001125899999999
Q ss_pred hhhHHHHH-HhhhhCCEEEEEce
Q 019332 232 GKMLDAVL-LNMKIHGRIAVCGM 253 (342)
Q Consensus 232 ~~~~~~~~-~~l~~~G~~v~~g~ 253 (342)
........ .....+.++++.+.
T Consensus 74 ~~~s~~~~~~~~~~g~~VID~Ss 96 (144)
T d2hjsa1 74 AEVSRAHAERARAAGCSVIDLSG 96 (144)
T ss_dssp HHHHHHHHHHHHHTTCEEEETTC
T ss_pred cchhhhhccccccCCceEEeech
Confidence 85544444 44555566666543
|
| >d2fcaa1 c.66.1.53 (A:10-213) tRNA (guanine-N(7)-)-methyltransferase TrmB {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: TrmB-like domain: tRNA (guanine-N(7)-)-methyltransferase TrmB species: Bacillus subtilis [TaxId: 1423]
Probab=89.86 E-value=1.8 Score=32.76 Aligned_cols=94 Identities=16% Similarity=0.069 Sum_probs=59.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCC-CCccEEE
Q 019332 153 GECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFP-EGIDIYF 227 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~-~~~d~vi 227 (342)
+..||=+| .|.|..++.+|+.. +.+++++..+......+.+ +.+.+.+--... +.. .+.+... +.+|.|+
T Consensus 30 ~PlvLeIG--cG~G~~~~~lA~~~p~~~~iGiD~~~~~i~~a~~~~~~~~l~Nv~~~~~--Da~-~l~~~~~~~~~d~v~ 104 (204)
T d2fcaa1 30 NPIHIEVG--TGKGQFISGMAKQNPDINYIGIELFKSVIVTAVQKVKDSEAQNVKLLNI--DAD-TLTDVFEPGEVKRVY 104 (204)
T ss_dssp CCEEEEEC--CTTSHHHHHHHHHCTTSEEEEECSCHHHHHHHHHHHHHSCCSSEEEECC--CGG-GHHHHCCTTSCCEEE
T ss_pred CceEEEEE--ecCcHHHHHHHHhCCCCcEEEeecchHHHHHHHHHHHHHhccCchhccc--chh-hhhcccCchhhhccc
Confidence 34566666 67899999999876 6799999999887665532 456643321222 211 2223333 3677665
Q ss_pred eCCC---------------hhhHHHHHHhhhhCCEEEEE
Q 019332 228 ENVG---------------GKMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 228 d~~g---------------~~~~~~~~~~l~~~G~~v~~ 251 (342)
-... ...+..+.+.|+|||.+...
T Consensus 105 i~fp~P~~k~~h~k~Rl~~~~~l~~~~r~LkpgG~l~i~ 143 (204)
T d2fcaa1 105 LNFSDPWPKKRHEKRRLTYSHFLKKYEEVMGKGGSIHFK 143 (204)
T ss_dssp EESCCCCCSGGGGGGSTTSHHHHHHHHHHHTTSCEEEEE
T ss_pred cccccccchhhhcchhhhHHHHHHHHHHhCCCCcEEEEE
Confidence 3322 13678889999999998764
|
| >d1ri5a_ c.66.1.34 (A:) mRNA cap (Guanine N-7) methyltransferase {Fungus (Encephalitozoon cuniculi) [TaxId: 6035]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: mRNA cap (Guanine N-7) methyltransferase domain: mRNA cap (Guanine N-7) methyltransferase species: Fungus (Encephalitozoon cuniculi) [TaxId: 6035]
Probab=89.85 E-value=0.15 Score=40.45 Aligned_cols=97 Identities=9% Similarity=0.050 Sum_probs=59.5
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHc---CCCeeEecCCchhHHHHHHHH-CCCCccE
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKF---GFDEAFNYKEEPDLNEALKRY-FPEGIDI 225 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~---g~~~v~~~~~~~~~~~~i~~~-~~~~~d~ 225 (342)
++++++||=.|. |.|..+..+++....+|++++.|++-.+.++++. +...-+..... +... ... .++.+|+
T Consensus 22 ~~~~~~VLDlGC--G~G~~~~~~~~~~~~~v~GiD~S~~~l~~A~~r~~~~~~~~~v~f~~~-D~~~--~~~~~~~~fD~ 96 (252)
T d1ri5a_ 22 TKRGDSVLDLGC--GKGGDLLKYERAGIGEYYGVDIAEVSINDARVRARNMKRRFKVFFRAQ-DSYG--RHMDLGKEFDV 96 (252)
T ss_dssp CCTTCEEEEETC--TTTTTHHHHHHHTCSEEEEEESCHHHHHHHHHHHHTSCCSSEEEEEES-CTTT--SCCCCSSCEEE
T ss_pred CCCcCEEEEecc--cCcHHHHHHHHcCCCeEEEecCCHHHHHHHHHHHHhcCCCcceEEEEc-chhh--hcccccccceE
Confidence 578999999984 4576677887765559999999999887776332 32211111111 1000 001 1226999
Q ss_pred EEeCCCh-----------hhHHHHHHhhhhCCEEEEE
Q 019332 226 YFENVGG-----------KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 226 vid~~g~-----------~~~~~~~~~l~~~G~~v~~ 251 (342)
|+-...- ..+..+.++|+|+|.++..
T Consensus 97 V~~~~~l~~~~~~~~~~~~~l~~i~~~Lk~gG~~i~~ 133 (252)
T d1ri5a_ 97 ISSQFSFHYAFSTSESLDIAQRNIARHLRPGGYFIMT 133 (252)
T ss_dssp EEEESCGGGGGSSHHHHHHHHHHHHHTEEEEEEEEEE
T ss_pred EEEcceeeecCCCHHHHHHHHHHHhceeCCCCEEEEE
Confidence 8764332 1345667889999998754
|
| >d1djqa3 c.4.1.1 (A:341-489,A:646-729) Trimethylamine dehydrogenase, middle domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: N-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, middle domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=89.84 E-value=0.22 Score=38.84 Aligned_cols=38 Identities=21% Similarity=0.227 Sum_probs=32.8
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
...+.+|+|+|| |..|+.++..++..|.+|+++..+++
T Consensus 46 ~~~~k~VvIIGa-GpAGl~aA~~l~~~G~~v~l~E~~~~ 83 (233)
T d1djqa3 46 TKNKDSVLIVGA-GPSGSEAARVLMESGYTVHLTDTAEK 83 (233)
T ss_dssp CSSCCEEEEECC-SHHHHHHHHHHHHTTCEEEEECSSSS
T ss_pred ccCCceEEEEcc-cHHHHHHHHHHHHhccceeeEeeccc
Confidence 356789999997 99999999999999999999986653
|
| >d1ojta2 c.3.1.5 (A:276-400) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=89.71 E-value=0.27 Score=34.26 Aligned_cols=36 Identities=17% Similarity=0.156 Sum_probs=31.5
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+..++++|.|+ |.+|+-+++..+.+|.+|+.+.+++
T Consensus 24 ~~p~~vvIiGg-G~IG~E~A~~~~~~G~~Vtive~~~ 59 (125)
T d1ojta2 24 EVPGKLLIIGG-GIIGLEMGTVYSTLGSRLDVVEMMD 59 (125)
T ss_dssp CCCSEEEEESC-SHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred ccCCeEEEECC-CHHHHHHHHHhhcCCCEEEEEEeec
Confidence 33578999997 9999999999999999999998764
|
| >d1dssg1 c.2.1.3 (G:1-148,G:313-334) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {South China Sea lobster (Palinurus versicolor) [TaxId: 150436]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: South China Sea lobster (Palinurus versicolor) [TaxId: 150436]
Probab=89.68 E-value=0.49 Score=34.78 Aligned_cols=94 Identities=20% Similarity=0.262 Sum_probs=60.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC---hhhHHHHHHHcC----C-C-e----------------eEecCCch
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGS---KDKIDLLKNKFG----F-D-E----------------AFNYKEEP 209 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s---~~~~~~~~~~~g----~-~-~----------------v~~~~~~~ 209 (342)
+|.|.|- |-+|..+.+.+...+.+|+++-.. .+...++. ++- . . . +.+.+++
T Consensus 2 kIgINGf-GRIGR~~~R~~~~~~~~ivaINd~~~~~~~~~yLl-kyDS~hG~~~~~i~~~~~~l~ing~~I~~~~~~~p- 78 (169)
T d1dssg1 2 KIGINGF-GRIGRLVLRAALEMGAQVVAVNDPFIALEYMVYMF-KYDSTHGMFKGEVKAEDGALVVDGKKITVFNEMKP- 78 (169)
T ss_dssp CEEEECC-SHHHHHHHHHHHHHTCCEEEEECTTSCHHHHHHHH-HCCTTTCCCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred eEEEECC-cHHHHHHHHHHHhCCCcEEEECCCCcCHHHHHHHH-hcccccCCcCCeEEEeCCEEEECCEEEEEEecCCh-
Confidence 5889996 999999999888778887777542 34555555 331 1 0 0 0111111
Q ss_pred hHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+++.+ .+ ++|+|+||.|- ...+.+...|..+.+-|.+..+..
T Consensus 79 ---~~i~W--~~~gvD~ViEcTG~f~~~~~~~~hl~~gakkViisaP~~ 122 (169)
T d1dssg1 79 ---ENIPW--SKAGAEYIVESTGVFTTIEKASAHFKGGAKKVIISAPSA 122 (169)
T ss_dssp ---GGCCH--HHHTCCEEEECSSSCCSHHHHGGGGTTTCSEEEESSCCS
T ss_pred ---HHCCc--cccCCCEEEecCceEcCHHHHHHHHhcCCceEeecCCcc
Confidence 11110 02 69999999998 777888889988876666665443
|
| >d1y7la1 c.79.1.1 (A:2-311) O-acetylserine sulfhydrylase (Cysteine synthase) {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Haemophilus influenzae [TaxId: 727]
Probab=89.66 E-value=2 Score=34.71 Aligned_cols=96 Identities=16% Similarity=0.171 Sum_probs=60.8
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEecC----------------
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNYK---------------- 206 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~~---------------- 206 (342)
+.+.+.++.+|+. ..+|.-|++++..|+.+|.+.+++.. +..|...++ .+|+.-+....
T Consensus 54 ~~g~~~~~~~vv~-~SsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~GA~vv~~~~~~~~~~~~~~~~~~~~ 131 (310)
T d1y7la1 54 KDGTLTKGKEIVD-ATSGNTGIALAYVAAARGYKITLTMPETMSLERKRLLC-GLGVNLVLTEGAKGMKGAIAKAEEIVA 131 (310)
T ss_dssp HTTSSCTTCEEEE-SCCSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCceeee-ecCCCchHHHHHHHHHhhccccccchhhhhhhhhhhHH-HhCCceEeccCccccchhhHHHHHHHH
Confidence 3456677776655 44699999999999999995444443 335666666 88874332110
Q ss_pred -------------Cc-------hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhh
Q 019332 207 -------------EE-------PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMK 243 (342)
Q Consensus 207 -------------~~-------~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~ 243 (342)
++ .....++.+..++.+|.++-++|+ ..+.-....++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~~~a~Ei~~~~~~~~d~vv~~~G~Gg~~~G~~~~lk 189 (310)
T d1y7la1 132 SDPSRYVMLKQFENPANPQIHRETTGPEIWKDTDGKVDVVVAGVGTGGSITGISRAIK 189 (310)
T ss_dssp HCTTTEECCCTTTCTHHHHHHHHTHHHHHHHHTTTCEEEEEEECSSSHHHHHHHHHHH
T ss_pred hhcCccccCCCCcchhhHHHhhhhHHHHHHHhcCCCCCEEEecCcCCcchhHHHHHHH
Confidence 00 012334555555579999998887 55665666665
|
| >d1eq2a_ c.2.1.2 (A:) ADP-L-glycero-D-mannoheptose 6-epimerase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: ADP-L-glycero-D-mannoheptose 6-epimerase species: Escherichia coli [TaxId: 562]
Probab=89.60 E-value=0.57 Score=37.51 Aligned_cols=72 Identities=10% Similarity=0.107 Sum_probs=42.7
Q ss_pred EEEecCCcHHHHHHHHHHHHcCC-EEEEEe--CChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEEeCCC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGC-YVVGSA--GSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYFENVG 231 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~--~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vid~~g 231 (342)
|||+||+|-+|..++..+...|. +|+++. ++..+...+. ++......+.. ++.+.+.....- .++.++-+++
T Consensus 2 ILITGgsGfIGs~lv~~L~~~g~~~V~~~d~~~~~~~~~~~~-~~~~~~~~~~~---~~~~~~~~~~~~~~~~~i~~~aa 77 (307)
T d1eq2a_ 2 IIVTGGAGFIGSNIVKALNDKGITDILVVDNLKDGTKFVNLV-DLNIADYMDKE---DFLIQIMAGEEFGDVEAIFHEGA 77 (307)
T ss_dssp EEEETTTSHHHHHHHHHHHTTTCCCEEEEECCSSGGGGHHHH-TSCCSEEEEHH---HHHHHHHTTCCCSSCCEEEECCS
T ss_pred EEEecCccHHHHHHHHHHHhCCCCeEEEEECCCCcchhhccc-ccchhhhccch---HHHHHHhhhhcccchhhhhhhcc
Confidence 89999999999998888877797 688775 2223333333 34333333221 333333332222 5778877654
|
| >d1obfo1 c.2.1.3 (O:1-152,O:315-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Achromobacter xylosoxidans [TaxId: 85698]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Achromobacter xylosoxidans [TaxId: 85698]
Probab=89.38 E-value=1.5 Score=32.19 Aligned_cols=93 Identities=11% Similarity=0.037 Sum_probs=57.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHc----CCEEEEEeC--ChhhHHHHHHHcCC-----C-e----------------eEecC
Q 019332 155 CVFISAASGAVGQLVGQFAKLL----GCYVVGSAG--SKDKIDLLKNKFGF-----D-E----------------AFNYK 206 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~----ga~Vi~~~~--s~~~~~~~~~~~g~-----~-~----------------v~~~~ 206 (342)
+|.|.|- |-+|..+.+.+-.. ..+|+++-. +.+...++- ++.- . . +++.+
T Consensus 3 kigINGf-GRIGR~v~R~~~~~~~~~~~~vvaINd~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~ 80 (173)
T d1obfo1 3 RVAINGY-GRIGRNILRAHYEGGKSHDIEIVAINDLGDPKTNAHLT-RYDTAHGKFPGTVSVNGSYMVVNGDKIRVDANR 80 (173)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTSCSSEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS
T ss_pred EEEEECC-cHHHHHHHHHHHhCCCCCCeEEEEEcCCCChHHHHHhh-cccccCCCcCceEEeccceEEECCEEEEEEecC
Confidence 5889996 99999988876532 346666663 333444443 3311 0 0 11111
Q ss_pred CchhHHHHHHHHC-CC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 207 EEPDLNEALKRYF-PE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 207 ~~~~~~~~i~~~~-~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+ ..++- .+ ++|+|+||.|. ...+.+...|..+-+-|.+..+..
T Consensus 81 ~-------p~~i~W~~~gvDiViEcTG~f~~~~~a~~hl~~GakkViiSAP~~ 126 (173)
T d1obfo1 81 N-------PAQLPWGALKVDVVLECTGFFTTKEKAGAHIKGGAKKVIISAPGG 126 (173)
T ss_dssp C-------GGGSCTTTTTCSEEEECSSSCCSHHHHHHHHHHTCSEEEESSCCC
T ss_pred C-------HHHCcccccccceEEEecccccCHHHHHHHhccCCcceEEecCCC
Confidence 1 11211 13 79999999998 777888899998877666665543
|
| >d1bgva1 c.2.1.7 (A:195-449) Glutamate dehydrogenase {Clostridium symbiosum [TaxId: 1512]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Clostridium symbiosum [TaxId: 1512]
Probab=89.21 E-value=0.37 Score=38.15 Aligned_cols=35 Identities=23% Similarity=0.209 Sum_probs=31.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
-.|.+|+|.|. |.+|..+++++...|++|+++..+
T Consensus 34 l~g~~v~IQGf-GnVG~~~a~~L~e~GakvvavsD~ 68 (255)
T d1bgva1 34 LVGKTVALAGF-GNVAWGAAKKLAELGAKAVTLSGP 68 (255)
T ss_dssp STTCEEEECCS-SHHHHHHHHHHHHHTCEEEEEEET
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHcCCeEEEEecC
Confidence 46789999995 999999999999999999988643
|
| >d1y8ca_ c.66.1.43 (A:) Putative methyltransferase CAC2371 {Clostridium acetobutylicum [TaxId: 1488]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: CAC2371-like domain: Putative methyltransferase CAC2371 species: Clostridium acetobutylicum [TaxId: 1488]
Probab=89.08 E-value=0.11 Score=40.96 Aligned_cols=89 Identities=16% Similarity=0.062 Sum_probs=57.2
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHH---cCCC-eeEecCCchhHHHHHHHHC-CCCccE
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNK---FGFD-EAFNYKEEPDLNEALKRYF-PEGIDI 225 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~---~g~~-~v~~~~~~~~~~~~i~~~~-~~~~d~ 225 (342)
.++.+||=.|. |.|..+..+++. |.+|++++.|++-.+.++++ .+.. .++.. + +.+.. .+.+|+
T Consensus 36 ~~~~~vLDiGC--G~G~~~~~l~~~-g~~v~GvD~S~~ml~~A~~~~~~~~~~v~~~~~----d----~~~~~~~~~fD~ 104 (246)
T d1y8ca_ 36 LVFDDYLDLAC--GTGNLTENLCPK-FKNTWAVDLSQEMLSEAENKFRSQGLKPRLACQ----D----ISNLNINRKFDL 104 (246)
T ss_dssp CCTTEEEEETC--TTSTTHHHHGGG-SSEEEEECSCHHHHHHHHHHHHHTTCCCEEECC----C----GGGCCCSCCEEE
T ss_pred CCCCeEEEEeC--cCCHHHHHHHHh-CCccEeeccchhhhhhccccccccCccceeecc----c----hhhhcccccccc
Confidence 34578999985 467777777764 78999999999877766632 2332 22221 1 12222 237999
Q ss_pred EEeCCCh-----------hhHHHHHHhhhhCCEEEE
Q 019332 226 YFENVGG-----------KMLDAVLLNMKIHGRIAV 250 (342)
Q Consensus 226 vid~~g~-----------~~~~~~~~~l~~~G~~v~ 250 (342)
|+...+. ..+..+.++|+|+|.++.
T Consensus 105 i~~~~~~~~~~~~~~~~~~~l~~~~~~LkpgG~~i~ 140 (246)
T d1y8ca_ 105 ITCCLDSTNYIIDSDDLKKYFKAVSNHLKEGGVFIF 140 (246)
T ss_dssp EEECTTGGGGCCSHHHHHHHHHHHHTTEEEEEEEEE
T ss_pred cceeeeeeeccCCHHHHHHHHHHHHHhCCCCeEEEE
Confidence 9854332 146678889999999874
|
| >d2p7ia1 c.66.1.41 (A:22-246) Hypothetical protein ECA1738 {Erwinia carotovora [TaxId: 554]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: UbiE/COQ5-like domain: Hypothetical protein ECA1738 species: Erwinia carotovora [TaxId: 554]
Probab=89.00 E-value=0.31 Score=37.76 Aligned_cols=94 Identities=11% Similarity=0.047 Sum_probs=58.2
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC-eeEecCCchhHHHHHHHHCCCCccEE
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD-EAFNYKEEPDLNEALKRYFPEGIDIY 226 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~-~v~~~~~~~~~~~~i~~~~~~~~d~v 226 (342)
.+..++.+||=.| .|.|..+..+++ .|.+|++++.|++-.+.+++...-. .++...-. ++ ...+.+|+|
T Consensus 16 ~~~~~~~~VLDiG--cG~G~~~~~l~~-~g~~v~giD~s~~~i~~a~~~~~~~~~~~~~~~~-~~------~~~~~fD~I 85 (225)
T d2p7ia1 16 TPFFRPGNLLELG--SFKGDFTSRLQE-HFNDITCVEASEEAISHAQGRLKDGITYIHSRFE-DA------QLPRRYDNI 85 (225)
T ss_dssp GGGCCSSCEEEES--CTTSHHHHHHTT-TCSCEEEEESCHHHHHHHHHHSCSCEEEEESCGG-GC------CCSSCEEEE
T ss_pred hhhCCCCcEEEEe--CCCcHHHHHHHH-cCCeEEEEeCcHHHhhhhhccccccccccccccc-cc------ccccccccc
Confidence 3445567899888 466777776665 4789999999999888888444321 22221111 11 112369998
Q ss_pred EeCCC-----h--hhHHHHH-HhhhhCCEEEEE
Q 019332 227 FENVG-----G--KMLDAVL-LNMKIHGRIAVC 251 (342)
Q Consensus 227 id~~g-----~--~~~~~~~-~~l~~~G~~v~~ 251 (342)
+-..- . ..+..+. ++|+++|.++..
T Consensus 86 ~~~~vleh~~d~~~~l~~i~~~~Lk~gG~l~i~ 118 (225)
T d2p7ia1 86 VLTHVLEHIDDPVALLKRINDDWLAEGGRLFLV 118 (225)
T ss_dssp EEESCGGGCSSHHHHHHHHHHTTEEEEEEEEEE
T ss_pred cccceeEecCCHHHHHHHHHHHhcCCCceEEEE
Confidence 74221 1 2345565 579999998754
|
| >d1jqea_ c.66.1.19 (A:) Histamine methyltransferase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Histamine methyltransferase domain: Histamine methyltransferase species: Human (Homo sapiens) [TaxId: 9606]
Probab=88.99 E-value=0.54 Score=37.61 Aligned_cols=103 Identities=11% Similarity=0.034 Sum_probs=59.6
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc-----C--CEEEEEeCChhhHHHHHHHcCC----C-eeEecCCchhHH---
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL-----G--CYVVGSAGSKDKIDLLKNKFGF----D-EAFNYKEEPDLN--- 212 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~-----g--a~Vi~~~~s~~~~~~~~~~~g~----~-~v~~~~~~~~~~--- 212 (342)
+..++.-+||=.|. |.|..+..+++.+ + .++++++.|+.-.+.+++.+.- . ..++.... .+.
T Consensus 36 ~~~~~~~~VLDiGc--G~G~~~~~ll~~l~~~~~~~~~~~~~vD~s~~~l~~a~~~~~~~~~~~~~~~~~~~~-~~~~~~ 112 (280)
T d1jqea_ 36 GDTKSEIKILSIGG--GAGEIDLQILSKVQAQYPGVCINNEVVEPSAEQIAKYKELVAKISNLENVKFAWHKE-TSSEYQ 112 (280)
T ss_dssp TTTCSEEEEEEETC--TTSHHHHHHHHHHHHHSTTCEEEEEEECCCHHHHHHHHHHHTTCCSCTTEEEEEECS-CHHHHH
T ss_pred ccCCCCCeEEEEcC--CCCHHHHHHHHHhhhhccCCceEEEEEeCcHHHHHHHHHHHhhccccccccccchhh-hhhhhc
Confidence 34455557888884 4555555554432 3 3678899888877777644321 1 12333222 222
Q ss_pred HHHHHHC-CCCccEEEeCCC-----h--hhHHHHHHhhhhCCEEEEEce
Q 019332 213 EALKRYF-PEGIDIYFENVG-----G--KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 213 ~~i~~~~-~~~~d~vid~~g-----~--~~~~~~~~~l~~~G~~v~~g~ 253 (342)
....... .+.+|+|+-... . ..+..+.++|+|+|.++....
T Consensus 113 ~~~~~~~~~~~fD~I~~~~~l~~~~d~~~~l~~l~~~LkpgG~l~i~~~ 161 (280)
T d1jqea_ 113 SRMLEKKELQKWDFIHMIQMLYYVKDIPATLKFFHSLLGTNAKMLIIVV 161 (280)
T ss_dssp HHHTTSSSCCCEEEEEEESCGGGCSCHHHHHHHHHHTEEEEEEEEEEEE
T ss_pred chhcccCCCCceeEEEEccceecCCCHHHHHHHHHhhCCCCCEEEEEEe
Confidence 2222222 237999876333 1 367888899999998876543
|
| >d1gado1 c.2.1.3 (O:0-148,O:313-330) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Escherichia coli [TaxId: 562]
Probab=88.84 E-value=1.2 Score=32.38 Aligned_cols=95 Identities=21% Similarity=0.189 Sum_probs=58.3
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCCh--hhHHHHHHHc----CC-C-e----------------eEecCCch
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSK--DKIDLLKNKF----GF-D-E----------------AFNYKEEP 209 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~--~~~~~~~~~~----g~-~-~----------------v~~~~~~~ 209 (342)
+|.|.|- |-+|..+.+.+.... .+|+++-... +.+.++. ++ |. + . +++.+++
T Consensus 3 kigINGF-GRIGR~v~R~~~~~~~i~ivaINd~~~~~~~ayLl-~yDSvhG~~~~~v~~~~~~l~ing~~I~i~~~~~p- 79 (166)
T d1gado1 3 KVGINGF-GRIGRIVFRAAQKRSDIEIVAINDLLDADYMAYML-KYDSTHGRFDGTVEVKDGHLIVNGKKIRVTAERDP- 79 (166)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG-
T ss_pred EEEEECC-cHHHHHHHHHHhhCCCeEEEEEeCCCCHHHHhhhh-eecCCCCCcCCeEEEeCCEEEECCEEEEEEeCCCh-
Confidence 5889997 999999999887654 5777776533 2333333 22 11 0 0 1111111
Q ss_pred hHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceeccc
Q 019332 210 DLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQY 257 (342)
Q Consensus 210 ~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~~ 257 (342)
. .+.+ +. ++|+|+||.|. ...+.+..+|..+-+-|.+..+..+
T Consensus 80 --~-~i~W--~~~gvDiViEcTG~f~t~~~~~~hl~~gakkViiSaP~~d 124 (166)
T d1gado1 80 --A-NLKW--DEVGVDVVAEATGLFLTDETARKHITAGAKKVVMTGPSKD 124 (166)
T ss_dssp --G-GGCH--HHHTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCSS
T ss_pred --H-HCCc--cccCCCEEEEccccccCHHHHHHHhcCCCceEEeeccccc
Confidence 1 1111 02 69999999998 7778888899888766666655443
|
| >d1jw9b_ c.111.1.1 (B:) Molybdenum cofactor biosynthesis protein MoeB {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Activating enzymes of the ubiquitin-like proteins superfamily: Activating enzymes of the ubiquitin-like proteins family: Molybdenum cofactor biosynthesis protein MoeB domain: Molybdenum cofactor biosynthesis protein MoeB species: Escherichia coli [TaxId: 562]
Probab=88.79 E-value=0.86 Score=35.66 Aligned_cols=33 Identities=18% Similarity=0.170 Sum_probs=27.9
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGS 186 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s 186 (342)
+.+|+|.|+ ||+|..++..+...|. +++.++.+
T Consensus 30 ~~~VliiG~-GglGs~va~~La~~Gvg~i~lvD~D 63 (247)
T d1jw9b_ 30 DSRVLIVGL-GGLGCAASQYLASAGVGNLTLLDFD 63 (247)
T ss_dssp HCEEEEECC-SHHHHHHHHHHHHHTCSEEEEECCC
T ss_pred CCCEEEECC-CHHHHHHHHHHHHcCCCeEEEECCc
Confidence 368999997 9999999999999999 77777643
|
| >d1gy8a_ c.2.1.2 (A:) Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: Uridine diphosphogalactose-4-epimerase (UDP-galactose 4-epimerase) species: Trypanosoma brucei [TaxId: 5691]
Probab=88.63 E-value=1.1 Score=37.44 Aligned_cols=31 Identities=16% Similarity=0.148 Sum_probs=25.9
Q ss_pred CEEEEecCCcHHHHHHHH-HHHHcCCEEEEEe
Q 019332 154 ECVFISAASGAVGQLVGQ-FAKLLGCYVVGSA 184 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~-la~~~ga~Vi~~~ 184 (342)
-+|||+||+|-+|...+. |++..|.+|++++
T Consensus 3 MKVLITG~tGfIGs~lv~~LL~~~~~~V~~~D 34 (383)
T d1gy8a_ 3 MRVLVCGGAGYIGSHFVRALLRDTNHSVVIVD 34 (383)
T ss_dssp CEEEEETTTSHHHHHHHHHHHHHCCCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHhCCCEEEEEe
Confidence 479999999999987665 5577899999986
|
| >d1inla_ c.66.1.17 (A:) Spermidine synthase {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Spermidine synthase domain: Spermidine synthase species: Thermotoga maritima [TaxId: 2336]
Probab=88.58 E-value=0.36 Score=39.20 Aligned_cols=91 Identities=15% Similarity=0.146 Sum_probs=58.4
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCC-------C---eeEecCCchhHHHHHHHHCCC
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGF-------D---EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~-------~---~v~~~~~~~~~~~~i~~~~~~ 221 (342)
..+|||.|+ |-|..+-.+++..+. +|.++..+++=.+.++ ++-. + .++. . |..+-+++ +.+
T Consensus 90 pk~VLiiGg--G~G~~~r~~l~~~~~~~i~~VEIDp~Vi~~a~-~~~~~~~~~~~d~rv~v~~-~---Da~~~l~~-~~~ 161 (295)
T d1inla_ 90 PKKVLIIGG--GDGGTLREVLKHDSVEKAILCEVDGLVIEAAR-KYLKQTSCGFDDPRAEIVI-A---NGAEYVRK-FKN 161 (295)
T ss_dssp CCEEEEEEC--TTCHHHHHHTTSTTCSEEEEEESCHHHHHHHH-HHCHHHHGGGGCTTEEEEE-S---CHHHHGGG-CSS
T ss_pred CceEEEecC--CchHHHHHHHhcCCCceEEEecCCHHHHHHHH-HHHHhhcccccCCCcEEEh-h---hHHHHHhc-CCC
Confidence 468999995 445666677777665 8999999988777776 4311 1 1221 1 33444443 334
Q ss_pred CccEEE-eCCC----------h-hhHHHHHHhhhhCCEEEEE
Q 019332 222 GIDIYF-ENVG----------G-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 222 ~~d~vi-d~~g----------~-~~~~~~~~~l~~~G~~v~~ 251 (342)
.+|+|| |+.. + +.+..+.++|+++|.++.-
T Consensus 162 ~yDvIi~D~~dp~~~~~~~L~t~efy~~~~~~L~~~Gi~v~q 203 (295)
T d1inla_ 162 EFDVIIIDSTDPTAGQGGHLFTEEFYQACYDALKEDGVFSAE 203 (295)
T ss_dssp CEEEEEEEC----------CCSHHHHHHHHHHEEEEEEEEEE
T ss_pred CCCEEEEcCCCCCcCchhhhccHHHHHHHHhhcCCCcEEEEe
Confidence 799875 3321 1 3577899999999998764
|
| >d1m6ya2 c.66.1.23 (A:2-114,A:216-294) TM0872, methyltransferase domain {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: MraW-like putative methyltransferases domain: TM0872, methyltransferase domain species: Thermotoga maritima [TaxId: 2336]
Probab=88.40 E-value=1.5 Score=32.82 Aligned_cols=104 Identities=15% Similarity=0.189 Sum_probs=63.0
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHc---CCC-eeEecCCchhHHHHHHHHCCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKF---GFD-EAFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~---g~~-~v~~~~~~~~~~~~i~~~~~~~ 222 (342)
..+++++++ |-. +-|.|-.+-.+++.. +.+|++++.+++-.+.+++.+ +.. ..++.+-. ++...+.....+.
T Consensus 19 l~~~~~~~~-lD~-t~G~Gghs~~il~~~~~~~vi~~D~d~~~l~~a~~~l~~~~~r~~~~~~~f~-~~~~~~~~~~~~~ 95 (192)
T d1m6ya2 19 LKPEDEKII-LDC-TVGEGGHSRAILEHCPGCRIIGIDVDSEVLRIAEEKLKEFSDRVSLFKVSYR-EADFLLKTLGIEK 95 (192)
T ss_dssp HCCCTTCEE-EET-TCTTSHHHHHHHHHCTTCEEEEEESCHHHHHHHHHHTGGGTTTEEEEECCGG-GHHHHHHHTTCSC
T ss_pred hCCCCCCEE-EEe-cCCCcHHHHHHHhcCCCCeEEEeechHHHHHHHHHhhccccccccchhHHHh-hHHHHHHHcCCCC
Confidence 467888855 444 344554455555544 679999999999888887433 322 23333322 4555555554447
Q ss_pred ccEE-EeCCCh---------------hhHHHHHHhhhhCCEEEEEcee
Q 019332 223 IDIY-FENVGG---------------KMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 223 ~d~v-id~~g~---------------~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
+|-| +|..-+ ..+..+.+.|+++|+++.+...
T Consensus 96 vdgIl~DlGvSs~Qld~~~r~~~~~~~~L~~a~~~Lk~gG~l~ii~f~ 143 (192)
T d1m6ya2 96 VDGILMDLGVSTYQLKGENRELENLKEFLKKAEDLLNPGGRIVVISFH 143 (192)
T ss_dssp EEEEEEECSCCHHHHHTSHTHHHHHHHHHHHGGGGEEEEEEEEEEESS
T ss_pred cceeeeccchhHhhhhhhhccchhHHHHHHHHHHhcCCCCeeeeeccc
Confidence 8865 563221 1355667788999998877553
|
| >d1u8fo1 c.2.1.3 (O:3-151,O:316-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Human(Homo sapiens), liver isoform [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Human(Homo sapiens), liver isoform [TaxId: 9606]
Probab=88.38 E-value=1.6 Score=31.82 Aligned_cols=100 Identities=11% Similarity=0.096 Sum_probs=59.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeC---ChhhHHHHHHHcCC-----C-ee------EecCCc-hhH--HHHH
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAG---SKDKIDLLKNKFGF-----D-EA------FNYKEE-PDL--NEAL 215 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~---s~~~~~~~~~~~g~-----~-~v------~~~~~~-~~~--~~~i 215 (342)
+|.|.|- |-+|..+.+.+... ..+++++-. +.+...++. ++-. . .+ +..+.. ..+ ....
T Consensus 3 kIgINGF-GRIGR~v~R~~~~~~~~~ivaINd~~~~~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~~~~~~~p 80 (169)
T d1u8fo1 3 KVGVNGF-GRIGRLVTRAAFNSGKVDIVAINDPFIDLNYMVYMF-QYDSTHGKFHGTVKAENGKLVINGNPITIFQERDP 80 (169)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHCSSEEEEEECSSSCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEETTEEEEEECCSSG
T ss_pred EEEEECC-cHHHHHHHHHHHHCCCcEEEEecCCCccHHHHHHHH-hhccccCCcCCeEEEECCEEEECCEEEEEEECCCh
Confidence 6899996 99999999877544 568877754 234555555 3311 0 00 000000 000 0001
Q ss_pred HHHCC-C-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 216 KRYFP-E-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 216 ~~~~~-~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.++-. + ++|+|+||.|. ...+.+...+..+-+-|.+..+..
T Consensus 81 ~~i~W~~~~vDiViEcTG~f~~~~~~~~hl~~gakkViiSaP~~ 124 (169)
T d1u8fo1 81 SKIKWGDAGAEYVVESTGVFTTMEKAGAHLQGGAKRVIISAPSA 124 (169)
T ss_dssp GGCCTTTTTCCEEEECSSSCCSHHHHGGGGGGTCSEEEESSCCS
T ss_pred hhCCccccCCCEEEEecceeccHHHHHHHHhcCCceEeeccccc
Confidence 12221 3 79999999998 677778888888876666665544
|
| >d1mb4a1 c.2.1.3 (A:1-132,A:355-369) Aspartate beta-semialdehyde dehydrogenase {Vibrio cholerae [TaxId: 666]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Aspartate beta-semialdehyde dehydrogenase species: Vibrio cholerae [TaxId: 666]
Probab=88.26 E-value=0.34 Score=34.82 Aligned_cols=87 Identities=20% Similarity=0.130 Sum_probs=48.9
Q ss_pred EEEEecCCcHHHHHHHHHHHH-c---CCEEEEEeCChhhHHHHHHHcCCCee--EecCCchhHHHHHHHHCCCCccEEEe
Q 019332 155 CVFISAASGAVGQLVGQFAKL-L---GCYVVGSAGSKDKIDLLKNKFGFDEA--FNYKEEPDLNEALKRYFPEGIDIYFE 228 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~-~---ga~Vi~~~~s~~~~~~~~~~~g~~~v--~~~~~~~~~~~~i~~~~~~~~d~vid 228 (342)
+|.|.||+|-+|+-.++++.. . ..++...+++....... .++-+.. ....+. +.+ ..+|++|-
T Consensus 2 KVaIiGATGyvG~eLi~lLl~~~~~p~~~i~~~ss~~~~gk~~--~~~~~~~~~~~~~~~----~~~-----~~~DvvF~ 70 (147)
T d1mb4a1 2 RVGLVGWRGMVGSVLMQRMVEERDFDLIEPVFFSTSQIGVPAP--NFGKDAGMLHDAFDI----ESL-----KQLDAVIT 70 (147)
T ss_dssp EEEEESCSSHHHHHHHHHHHHTTGGGGSEEEEEESSCCSSBCC--CSSSCCCBCEETTCH----HHH-----TTCSEEEE
T ss_pred EEEEECCccHHHHHHHHHHHhcCCCCceEEEEecccccccccc--ccCCcceeeecccch----hhh-----ccccEEEE
Confidence 589999999999999986542 2 35766655443211111 1221111 111111 111 24899999
Q ss_pred CCChhhHHHHHHhhhhCC-E--EEEEc
Q 019332 229 NVGGKMLDAVLLNMKIHG-R--IAVCG 252 (342)
Q Consensus 229 ~~g~~~~~~~~~~l~~~G-~--~v~~g 252 (342)
|.+........+.+...| + +++.+
T Consensus 71 alp~~~s~~~~~~l~~~g~~~~VIDlS 97 (147)
T d1mb4a1 71 CQGGSYTEKVYPALRQAGWKGYWIDAA 97 (147)
T ss_dssp CSCHHHHHHHHHHHHHTTCCSEEEESS
T ss_pred ecCchHHHHHhHHHHHcCCceEEEeCC
Confidence 999966555555555544 3 55544
|
| >d1oria_ c.66.1.6 (A:) Protein arginine N-methyltransferase 1, PRMT1 {Rat (Rattus norvegicus) [TaxId: 10116]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Protein arginine N-methyltransferase 1, PRMT1 species: Rat (Rattus norvegicus) [TaxId: 10116]
Probab=88.14 E-value=0.19 Score=41.46 Aligned_cols=91 Identities=23% Similarity=0.148 Sum_probs=51.5
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHH---HcCCC---eeEecCCchhHHHHHHHHCCC
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~~~ 221 (342)
.+.+|++||-.|+ |.|..++.+|+ .|+ +|+++..++. ...+++ ..+.. .++..+.. ++ +...+
T Consensus 30 ~~~~~~~VLDiGc--G~G~ls~~aa~-~Ga~~V~avd~s~~-~~~a~~~~~~n~~~~~v~~~~~~~~-~~-----~~~~~ 99 (316)
T d1oria_ 30 HLFKDKVVLDVGS--GTGILCMFAAK-AGARKVIGIECSSI-SDYAVKIVKANKLDHVVTIIKGKVE-EV-----ELPVE 99 (316)
T ss_dssp HHHTTCEEEEETC--TTSHHHHHHHH-TTCSEEEEEECSTT-HHHHHHHHHHTTCTTTEEEEESCTT-TC-----CCSSS
T ss_pred ccCCcCEEEEEec--CCcHHHHHHHH-hCCCEEEEEcCcHH-HhhhhhHHHHhCCccccceEeccHH-Hc-----ccccc
Confidence 4568899999985 44776666666 576 8999998764 233321 33432 22222211 11 01112
Q ss_pred CccEEEe-CCCh-----h----hHHHHHHhhhhCCEEE
Q 019332 222 GIDIYFE-NVGG-----K----MLDAVLLNMKIHGRIA 249 (342)
Q Consensus 222 ~~d~vid-~~g~-----~----~~~~~~~~l~~~G~~v 249 (342)
.+|+|+. ..+. . .+....+.|+|+|+++
T Consensus 100 ~~D~ivs~~~~~~l~~e~~~~~~l~~~~r~Lkp~G~ii 137 (316)
T d1oria_ 100 KVDIIISEWMGYCLFYESMLNTVLHARDKWLAPDGLIF 137 (316)
T ss_dssp CEEEEEECCCBBTBTBTCCHHHHHHHHHHHEEEEEEEE
T ss_pred eeEEEeeeeeeeeeccHHHHHHHHHHHHhcCCCCeEEE
Confidence 6898864 2221 1 2344557999999886
|
| >d1hwxa1 c.2.1.7 (A:209-501) Glutamate dehydrogenase {Cow (Bos taurus) [TaxId: 9913]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Glutamate dehydrogenase species: Cow (Bos taurus) [TaxId: 9913]
Probab=87.93 E-value=0.34 Score=39.09 Aligned_cols=34 Identities=15% Similarity=0.174 Sum_probs=30.6
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
-.|.+|+|.|- |.+|..+++++...|++|++++.
T Consensus 34 L~gktvaIqGf-GnVG~~~A~~L~e~Gakvv~vsD 67 (293)
T d1hwxa1 34 FGDKTFAVQGF-GNVGLHSMRYLHRFGAKCVAVGE 67 (293)
T ss_dssp STTCEEEEECC-SHHHHHHHHHHHHTTCEEEEEEE
T ss_pred CCCCEEEEECC-CHHHHHHHHHHHHCCCEEEEEEc
Confidence 35789999996 99999999999999999998874
|
| >d1qzza2 c.66.1.12 (A:102-357) Aclacinomycin-10-hydroxylase RdmB {Streptomyces purpurascens [TaxId: 1924]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Plant O-methyltransferase, C-terminal domain domain: Aclacinomycin-10-hydroxylase RdmB species: Streptomyces purpurascens [TaxId: 1924]
Probab=87.87 E-value=0.5 Score=37.39 Aligned_cols=100 Identities=13% Similarity=0.120 Sum_probs=61.5
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCeeEecCCchhHHHHHHHHCCC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDEAFNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~v~~~~~~~~~~~~i~~~~~~ 221 (342)
+...+....+||=+| +|.|..+..+++.. +.++++.+. ++-.+.+++ +.|....+..... ++.+ -.+.
T Consensus 75 ~~~d~~~~~~vlDvG--~G~G~~~~~l~~~~P~~~~~~~Dl-p~~~~~a~~~~~~~~~~~ri~~~~~-d~~~----~~p~ 146 (256)
T d1qzza2 75 DAYDWSAVRHVLDVG--GGNGGMLAAIALRAPHLRGTLVEL-AGPAERARRRFADAGLADRVTVAEG-DFFK----PLPV 146 (256)
T ss_dssp HTSCCTTCCEEEEET--CTTSHHHHHHHHHCTTCEEEEEEC-HHHHHHHHHHHHHTTCTTTEEEEEC-CTTS----CCSC
T ss_pred hcCCCccCCEEEEEC--CCCCHHHHHHHHhhcCcEEEEecC-hHHHHHHHHHHhhcCCcceeeeeee-eccc----cccc
Confidence 334567778999988 67889999999887 679999885 443333331 3344221221111 2111 1123
Q ss_pred CccEEEeCC-----Ch----hhHHHHHHhhhhCCEEEEEce
Q 019332 222 GIDIYFENV-----GG----KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 222 ~~d~vid~~-----g~----~~~~~~~~~l~~~G~~v~~g~ 253 (342)
++|+++-.. .. ..+..+.+.|+|+|+++.+..
T Consensus 147 ~~D~v~~~~vLh~~~d~~~~~lL~~i~~~LkpgG~llI~d~ 187 (256)
T d1qzza2 147 TADVVLLSFVLLNWSDEDALTILRGCVRALEPGGRLLVLDR 187 (256)
T ss_dssp CEEEEEEESCGGGSCHHHHHHHHHHHHHHEEEEEEEEEEEC
T ss_pred cchhhhccccccccCcHHHHHHHHHHHhhcCCcceeEEEEe
Confidence 688876321 11 246778899999999998764
|
| >d2i76a2 c.2.1.6 (A:2-154) Hypothetical protein TM1727 {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Hypothetical protein TM1727 species: Thermotoga maritima [TaxId: 2336]
Probab=87.80 E-value=0.22 Score=35.93 Aligned_cols=82 Identities=15% Similarity=0.127 Sum_probs=49.8
Q ss_pred EEecCCcHHHHHHHHHHHHcCCE-EEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhhH
Q 019332 157 FISAASGAVGQLVGQFAKLLGCY-VVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKML 235 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~ga~-Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~~ 235 (342)
-+.|+ |-+|.+.++.++. +.+ +.+..|+.++.+.+.+..+. ...+..+. + ...|+||-|+....+
T Consensus 3 gfIG~-G~mg~~l~~~L~~-~~~~~~v~~R~~~~~~~l~~~~~~-~~~~~~~~------~-----~~~DiVil~v~d~~i 68 (153)
T d2i76a2 3 NFVGT-GTLTRFFLECLKD-RYEIGYILSRSIDRARNLAEVYGG-KAATLEKH------P-----ELNGVVFVIVPDRYI 68 (153)
T ss_dssp EEESC-CHHHHHHHHTTC-----CCCEECSSHHHHHHHHHHTCC-CCCSSCCC------C-----C---CEEECSCTTTH
T ss_pred EEEeC-cHHHHHHHHHHHh-CCCEEEEEeCChhhhcchhhcccc-cccchhhh------h-----ccCcEEEEeccchhh
Confidence 46675 9999987776644 444 35778899998888844443 22222211 0 247999999988888
Q ss_pred HHHHHhhhhCCE-EEEEc
Q 019332 236 DAVLLNMKIHGR-IAVCG 252 (342)
Q Consensus 236 ~~~~~~l~~~G~-~v~~g 252 (342)
......|+..++ ++.++
T Consensus 69 ~~v~~~l~~~~~ivi~~s 86 (153)
T d2i76a2 69 KTVANHLNLGDAVLVHCS 86 (153)
T ss_dssp HHHHTTTCCSSCCEEECC
T ss_pred hHHHhhhcccceeeeecc
Confidence 888888875554 44443
|
| >d2iida1 c.3.1.2 (A:4-319,A:433-486) L-aminoacid oxidase {Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: L-aminoacid oxidase species: Malayan pit viper (Calloselasma rhodostoma) [TaxId: 8717]
Probab=87.71 E-value=0.35 Score=39.43 Aligned_cols=37 Identities=22% Similarity=0.135 Sum_probs=31.1
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.....+|+|+|| |..|++++..++..|.+|.++..++
T Consensus 27 ~~~pkkV~IIGa-G~aGLsaA~~L~~~G~~V~vlE~~~ 63 (370)
T d2iida1 27 TSNPKHVVIVGA-GMAGLSAAYVLAGAGHQVTVLEASE 63 (370)
T ss_dssp CSSCCEEEEECC-BHHHHHHHHHHHHHTCEEEEECSSS
T ss_pred CCCCCeEEEECC-CHHHHHHHHHHHHCCCCEEEEeCCC
Confidence 445568999997 9999998888888899999998654
|
| >d1lssa_ c.2.1.9 (A:) Ktn Mja218 {Archaeon Methanococcus jannaschii [TaxId: 2190]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Ktn Mja218 species: Archaeon Methanococcus jannaschii [TaxId: 2190]
Probab=87.66 E-value=1.2 Score=30.85 Aligned_cols=60 Identities=13% Similarity=0.204 Sum_probs=47.1
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHcCCCeeEecC
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKFGFDEAFNYK 206 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~g~~~v~~~~ 206 (342)
+.+++...+.+++.-..-..-+.+.++++.+|. ++++.+.+++..+.++ ++|++.+++..
T Consensus 59 ~~~~i~~a~~vv~~t~~d~~N~~~~~~~k~~~~~~iI~~~~~~~~~~~l~-~~G~d~vi~p~ 119 (132)
T d1lssa_ 59 EDAGIEDADMYIAVTGKEEVNLMSSLLAKSYGINKTIARISEIEYKDVFE-RLGVDVVVSPE 119 (132)
T ss_dssp HHTTTTTCSEEEECCSCHHHHHHHHHHHHHTTCCCEEEECSSTTHHHHHH-HTTCSEEECHH
T ss_pred hhcChhhhhhhcccCCcHHHHHHHHHHHHHcCCceEEEEecCHHHHHHHH-HCCCCEEECHH
Confidence 456777777776654445667788899999988 7888888888888888 99999988653
|
| >d1ldna1 c.2.1.5 (A:15-162) Lactate dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Lactate dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=87.56 E-value=1.8 Score=30.76 Aligned_cols=37 Identities=24% Similarity=0.144 Sum_probs=30.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCC--EEEEEeCChhh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGC--YVVGSAGSKDK 189 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~~s~~~ 189 (342)
.+.+|.|.|+ |.+|...+..+...+. ++...+..+++
T Consensus 5 ~~~KI~IiGa-G~vG~~~a~~l~~~~l~~el~L~Di~~~~ 43 (148)
T d1ldna1 5 GGARVVVIGA-GFVGASYVFALMNQGIADEIVLIDANESK 43 (148)
T ss_dssp TSCEEEEECC-SHHHHHHHHHHHHHTCCSEEEEECSSHHH
T ss_pred CCCeEEEECc-CHHHHHHHHHHHhcCCCceEEEEeecccc
Confidence 4568999997 9999988888777664 79999888766
|
| >d1vkna1 c.2.1.3 (A:1-144,A:308-339) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Thermotoga maritima [TaxId: 2336]
Probab=87.54 E-value=1.5 Score=32.38 Aligned_cols=88 Identities=14% Similarity=0.030 Sum_probs=50.2
Q ss_pred EEEEecCCcHHHHHHHHHHHHcC-CEEEEEeCChhhHHHHHHHcC----CCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLG-CYVVGSAGSKDKIDLLKNKFG----FDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~g-a~Vi~~~~s~~~~~~~~~~~g----~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+|.|.||||-+|+-.++++..+- .++..+.++...-..+. +.. ....+... +..+... ++|++|-|
T Consensus 3 kVaIvGATGyvG~eLirlL~~HP~~ei~~l~s~~~aG~~i~-~~~p~~~~~~~~~~~---~~~~~~~-----~~dvvf~a 73 (176)
T d1vkna1 3 RAGIIGATGYTGLELVRLLKNHPEAKITYLSSRTYAGKKLE-EIFPSTLENSILSEF---DPEKVSK-----NCDVLFTA 73 (176)
T ss_dssp EEEEESTTSHHHHHHHHHHHHCTTEEEEEEECSTTTTSBHH-HHCGGGCCCCBCBCC---CHHHHHH-----HCSEEEEC
T ss_pred EEEEECCCcHHHHHHHHHHHhCCCceEEEeeccccCCCccc-ccCchhhcccccccc---CHhHhcc-----ccceEEEc
Confidence 68999999999999999997654 47776665443222222 111 11122222 2222211 38999999
Q ss_pred CChhhHHHHHHhhhhCCEEEEEc
Q 019332 230 VGGKMLDAVLLNMKIHGRIAVCG 252 (342)
Q Consensus 230 ~g~~~~~~~~~~l~~~G~~v~~g 252 (342)
.+........... .+.++++.+
T Consensus 74 ~p~~~s~~~~~~~-~~~~VIDlS 95 (176)
T d1vkna1 74 LPAGASYDLVREL-KGVKIIDLG 95 (176)
T ss_dssp CSTTHHHHHHTTC-CSCEEEESS
T ss_pred cccHHHHHHHHhh-ccceEEecC
Confidence 9985444333332 345666554
|
| >d3cmco1 c.2.1.3 (O:0-148,O:313-333) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Bacillus stearothermophilus, nca 1503 [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Bacillus stearothermophilus, nca 1503 [TaxId: 1422]
Probab=87.25 E-value=2.2 Score=31.17 Aligned_cols=94 Identities=21% Similarity=0.183 Sum_probs=55.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCC--hhhHHHHHHHcCC-----C---------------eeEecCCchhH
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGS--KDKIDLLKNKFGF-----D---------------EAFNYKEEPDL 211 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s--~~~~~~~~~~~g~-----~---------------~v~~~~~~~~~ 211 (342)
+|.|.|- |-+|..+.+.+-.. ..+++++-.. .+...++- ++.- + .+.-++.. +
T Consensus 3 kIgINGf-GRIGR~v~R~~l~~~~~~ivaINd~~d~~~~ayll-~yDS~hG~~~~~v~~~~~~l~i~g~~i~i~~~~-~- 78 (171)
T d3cmco1 3 KVGINGF-GRIGRNVFRAALKNPDIEVVAVNDLTDANTLAHLL-KYDSVHGRLDAEVSVNGNNLVVNGKEIIVKAER-D- 78 (171)
T ss_dssp EEEEESC-SHHHHHHHHHHTTCTTEEEEEEECSSCHHHHHHHH-HEETTTEECSSCEEEETTEEEETTEEEEEECCS-S-
T ss_pred EEEEECC-CHHHHHHHHHHhhCCCcEEEEEcCCCCHHHHhhhh-cccccCCcccccccccCCCEEeCCcceeeEecC-C-
Confidence 6889997 99999988877544 4577766532 23333443 2211 0 00000111 1
Q ss_pred HHHHHHHCC-C-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceec
Q 019332 212 NEALKRYFP-E-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMIS 255 (342)
Q Consensus 212 ~~~i~~~~~-~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~ 255 (342)
..+... . ++|+|+||.|. ...+.+..+|..+-+-|.+..+.
T Consensus 79 ---p~~i~W~~~~vDiViEcTG~f~t~~~~~~hl~~gakkViiSap~ 122 (171)
T d3cmco1 79 ---PENLAWGEIGVDIVVESTGRFTKREDAAKHLEAGAKKVIISAPA 122 (171)
T ss_dssp ---GGGCCTGGGTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCC
T ss_pred ---HHHccccccCCcEEEEecCccCCHHHHHHHHhCCCceEEEeccc
Confidence 111111 2 69999999998 77788888898876555555443
|
| >d1hdgo1 c.2.1.3 (O:1-148,O:313-331) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Thermotoga maritima [TaxId: 2336]
Probab=87.23 E-value=1.6 Score=31.80 Aligned_cols=94 Identities=18% Similarity=0.229 Sum_probs=57.0
Q ss_pred EEEEecCCcHHHHHHHHHHHH-c--CCEEEEEeCC--hhhHHHHHHHc----CC-C-e----------------eEecCC
Q 019332 155 CVFISAASGAVGQLVGQFAKL-L--GCYVVGSAGS--KDKIDLLKNKF----GF-D-E----------------AFNYKE 207 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~-~--ga~Vi~~~~s--~~~~~~~~~~~----g~-~-~----------------v~~~~~ 207 (342)
+|.|.|- |-+|..+.+.+.. . +.+|+++-.. .+...++- ++ |. . . +++.++
T Consensus 2 kIgINGf-GRIGR~v~R~~~~~~~~~i~vvaINd~~~~e~~ayLl-kyDS~hG~~~~~v~~~~~~l~ing~~I~~~~~~~ 79 (169)
T d1hdgo1 2 RVAINGF-GRIGRLVYRIIYERKNPDIEVVAINDLTDTKTLAHLL-KYDSVHKKFPGKVEYTENSLIVDGKEIKVFAEPD 79 (169)
T ss_dssp EEEEECC-SHHHHHHHHHHHHHTCTTCEEEEEECSSCHHHHHHHH-HCCTTTCCCSSCEEECSSEEEETTEEEEEECCSS
T ss_pred EEEEECC-ChHHHHHHHHHHhccCCCEEEEEeccCccHHHHHHHH-hccccccccCceEEEECCEEEECCEEEEEEeCCC
Confidence 6899996 9999999987753 2 4687776532 34444444 33 11 0 0 111111
Q ss_pred chhHHHHHHHHCCC-CccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 208 EPDLNEALKRYFPE-GIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 208 ~~~~~~~i~~~~~~-~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
+ . ++.+ .+ ++|+|+||.|. ...+.+...+..+-+-|.+..+..
T Consensus 80 p---~-~i~W--~~~gvD~ViEcTG~f~t~~~~~~hl~~GakkViiSAP~k 124 (169)
T d1hdgo1 80 P---S-KLPW--KDLGVDFVIESTGVFRNREKAELHLQAGAKKVIITAPAK 124 (169)
T ss_dssp G---G-GSCH--HHHTCCEEEECSSSCCBHHHHTHHHHTTCSEEEESSCCB
T ss_pred h---h-hCCc--cccCCCEEEEecceeccccchhhhccCCCceEEEecccC
Confidence 1 1 1111 01 69999999998 778888889988765555555443
|
| >d1o58a_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Thermotoga maritima [TaxId: 2336]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Thermotoga maritima [TaxId: 2336]
Probab=87.02 E-value=2 Score=34.44 Aligned_cols=43 Identities=21% Similarity=0.339 Sum_probs=32.0
Q ss_pred EEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCC
Q 019332 157 FISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFD 200 (342)
Q Consensus 157 lI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~ 200 (342)
+|...+|..|+++...|+.+|.+.++... ++.|.+.++ .+|+.
T Consensus 58 vv~~SsGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~GA~ 103 (293)
T d1o58a_ 58 IVEPTSGNMGIAIAMIGAKRGHRVILTMPETMSVERRKVLK-MLGAE 103 (293)
T ss_dssp EEEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCE
T ss_pred eEEecCcchhhHHHHhhhhccceeEeeccccccHHHeeccc-cCCcE
Confidence 56666799999999999999985433332 456777777 88884
|
| >d1fcja_ c.79.1.1 (A:) O-acetylserine sulfhydrylase (Cysteine synthase) {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Salmonella typhimurium [TaxId: 90371]
Probab=86.99 E-value=5.3 Score=31.74 Aligned_cols=96 Identities=18% Similarity=0.208 Sum_probs=58.9
Q ss_pred hhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEec-----------------
Q 019332 146 EVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNY----------------- 205 (342)
Q Consensus 146 ~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~----------------- 205 (342)
+.+.++++.+| +...+|..|.+++..|+.+|.+++++.. ++.+...++ .+|+.-+...
T Consensus 54 ~~g~~~~~~~v-v~assGn~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~~~-~~ga~v~~~~~~~~~~~~~~~~~~~~~ 131 (302)
T d1fcja_ 54 KRGVLKPGVEL-VEPTNGNTGIALAYVAAARGYKLTLTMPETMSIERRKLLK-ALGANLVLTEGAKGMKGAIQKAEEIVA 131 (302)
T ss_dssp HHTCCCTTCEE-EEECSSHHHHHHHHHHHHHTCCEEEEEETTSCHHHHHHHH-HTTCEEEEECGGGHHHHHHHHHHHHHH
T ss_pred HcCCCCCCceE-EEeccccchhHHHHHHHHhccCCceEEeecCcHHHHHHHH-HhccceEEeccccccchhhhHHHHHHh
Confidence 33567777665 4555799999999999999985444442 445666666 7877422100
Q ss_pred ------------CCc-------hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhh
Q 019332 206 ------------KEE-------PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMK 243 (342)
Q Consensus 206 ------------~~~-------~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~ 243 (342)
... .....++.+..++.+|.++-++|+ ..+.-....++
T Consensus 132 ~~~~~~~~~~~~~~~~~~~~~~~ti~~Ei~e~~~~~~d~vv~~vG~GG~~~Gi~~~lk 189 (302)
T d1fcja_ 132 SDPQKYLLLQQFSNPANPEIHEKTTGPEIWEDTDGQVDVFISGVGTGGTLTGVTRYIK 189 (302)
T ss_dssp TSTTTEEECCTTTCTHHHHHHHHTHHHHHHHHTTTCCCEEEEECSSSHHHHHHHHHHH
T ss_pred hhccceeccccccccchhHHHHhHHHHHHHHhcCCCCCEEEEcCCCccccccceeeee
Confidence 000 013345555555578999999887 55544444444
|
| >d1xhca2 c.3.1.5 (A:104-225) NADH oxidase /nitrite reductase {Pyrococcus furiosus [TaxId: 2261]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: NADH oxidase /nitrite reductase species: Pyrococcus furiosus [TaxId: 2261]
Probab=86.98 E-value=0.46 Score=32.77 Aligned_cols=36 Identities=14% Similarity=0.027 Sum_probs=31.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+.+.+++|.|| |.+|+-+++.+...|.+|+.+.+++
T Consensus 30 ~~~~~vvIiGg-G~iG~E~A~~l~~~g~~Vtlv~~~~ 65 (122)
T d1xhca2 30 ENSGEAIIIGG-GFIGLELAGNLAEAGYHVKLIHRGA 65 (122)
T ss_dssp HHHSEEEEEEC-SHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred hcCCcEEEECC-cHHHHHHHHHhhcccceEEEEeccc
Confidence 44578999997 9999998898999999999988764
|
| >d1k0ia1 c.3.1.2 (A:1-173,A:276-394) p-Hydroxybenzoate hydroxylase, PHBH {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: p-Hydroxybenzoate hydroxylase, PHBH species: Pseudomonas aeruginosa [TaxId: 287]
Probab=86.78 E-value=0.26 Score=39.60 Aligned_cols=33 Identities=30% Similarity=0.242 Sum_probs=29.1
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
.|+|.|| |..|++++..++..|.+|.++.++++
T Consensus 4 ~V~IvGa-Gp~Gl~~A~~L~~~G~~v~vlE~~~~ 36 (292)
T d1k0ia1 4 QVAIIGA-GPSGLLLGQLLHKAGIDNVILERQTP 36 (292)
T ss_dssp SEEEECC-SHHHHHHHHHHHHHTCCEEEECSSCH
T ss_pred CEEEECc-CHHHHHHHHHHHHCCCCEEEEeCCCC
Confidence 4899997 99999999999999999999987653
|
| >d1feca2 c.3.1.5 (A:170-286) Trypanothione reductase {Crithidia fasciculata [TaxId: 5656]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Crithidia fasciculata [TaxId: 5656]
Probab=86.41 E-value=0.59 Score=31.84 Aligned_cols=34 Identities=9% Similarity=-0.024 Sum_probs=26.5
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHc---CCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLL---GCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~---ga~Vi~~~~s~ 187 (342)
..+++|.|+ |.+|.-+++++..+ |.+|..+.+++
T Consensus 18 p~~v~IiGg-G~ig~E~A~~l~~~~~~g~~Vtli~~~~ 54 (117)
T d1feca2 18 PKRALCVGG-GYISIEFAGIFNAYKARGGQVDLAYRGD 54 (117)
T ss_dssp CSEEEEECS-SHHHHHHHHHHHHHSCTTCEEEEEESSS
T ss_pred CCeEEEECC-ChHHHHHHHHhHhhcccccccceecccc
Confidence 478999997 99998777665544 77999888764
|
| >d2b78a2 c.66.1.51 (A:69-385) Hypothetical protein SMu776, middle and C-terminal domains {Streptococcus mutans [TaxId: 1309]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: hypothetical RNA methyltransferase domain: Hypothetical protein SMu776, middle and C-terminal domains species: Streptococcus mutans [TaxId: 1309]
Probab=86.32 E-value=0.73 Score=37.71 Aligned_cols=98 Identities=16% Similarity=0.089 Sum_probs=59.2
Q ss_pred cCCCCCCEEEEecC-CcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHHHc---CC--C--eeEecCCchhHHHHHHHH
Q 019332 148 CSPKQGECVFISAA-SGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKNKF---GF--D--EAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 148 ~~~~~~~~vlI~ga-~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~~~---g~--~--~v~~~~~~~~~~~~i~~~ 218 (342)
..+.+|++||=..+ +|+.+ +..+ ..|+ +|+.++.++...+.+++.+ |. + .++.. +.-+.+++.
T Consensus 140 ~~~~~g~~VLdlf~~~G~~s---l~aa-~~ga~~V~~vD~s~~a~~~a~~N~~~n~l~~~~~~~i~~----d~~~~l~~~ 211 (317)
T d2b78a2 140 NGSAAGKTVLNLFSYTAAFS---VAAA-MGGAMATTSVDLAKRSRALSLAHFEANHLDMANHQLVVM----DVFDYFKYA 211 (317)
T ss_dssp HTTTBTCEEEEETCTTTHHH---HHHH-HTTBSEEEEEESCTTHHHHHHHHHHHTTCCCTTEEEEES----CHHHHHHHH
T ss_pred HHhhCCCceeecCCCCcHHH---HHHH-hCCCceEEEecCCHHHHHHHHHHHHHhcccCcceEEEEc----cHHHHHHHH
Confidence 45778999986653 44444 3333 3577 8999999998777776432 22 1 22332 333344332
Q ss_pred C--CCCccEEE-eCC--Ch-------------hhHHHHHHhhhhCCEEEEEce
Q 019332 219 F--PEGIDIYF-ENV--GG-------------KMLDAVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 219 ~--~~~~d~vi-d~~--g~-------------~~~~~~~~~l~~~G~~v~~g~ 253 (342)
. ++.||+|| |.- +. +.+..++++|+|+|.++.+..
T Consensus 212 ~~~~~~fD~Ii~DPP~f~~~~~~~~~~~~~~~~L~~~a~~ll~pgG~l~~~sc 264 (317)
T d2b78a2 212 RRHHLTYDIIIIDPPSFARNKKEVFSVSKDYHKLIRQGLEILSENGLIIASTN 264 (317)
T ss_dssp HHTTCCEEEEEECCCCC-----CCCCHHHHHHHHHHHHHHTEEEEEEEEEEEC
T ss_pred HhhcCCCCEEEEcChhhccchhHHHHHHHHHHHHHHHHHHHcCCCCEEEEEeC
Confidence 1 23799876 321 10 245678889999999887654
|
| >d1c0pa1 c.4.1.2 (A:999-1193,A:1289-1361) D-aminoacid oxidase, N-terminal domain {Rhodotorula gracilis [TaxId: 5286]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: D-aminoacid oxidase, N-terminal domain domain: D-aminoacid oxidase, N-terminal domain species: Rhodotorula gracilis [TaxId: 5286]
Probab=85.98 E-value=0.59 Score=36.36 Aligned_cols=34 Identities=18% Similarity=0.109 Sum_probs=29.4
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
.-.+|+|+|| |..|++++..+...|.+|.++.+.
T Consensus 5 ~~~kVvVIGa-GiaGl~~A~~L~~~G~~V~vier~ 38 (268)
T d1c0pa1 5 SQKRVVVLGS-GVIGLSSALILARKGYSVHILARD 38 (268)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCEEEEEESS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3457999997 999999988888899999999864
|
| >d1e6ua_ c.2.1.2 (A:) GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: GDP-4-keto-6-deoxy-d-mannose epimerase/reductase (GDP-fucose synthetase) species: Escherichia coli [TaxId: 562]
Probab=85.92 E-value=0.29 Score=39.90 Aligned_cols=32 Identities=22% Similarity=0.228 Sum_probs=28.0
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
.+|||+||+|-+|...+..+...|..|+++..
T Consensus 3 kkIlITG~tGfiG~~l~~~L~~~g~~vi~~~~ 34 (315)
T d1e6ua_ 3 QRVFIAGHRGMVGSAIRRQLEQRGDVELVLRT 34 (315)
T ss_dssp EEEEEETTTSHHHHHHHHHHTTCTTEEEECCC
T ss_pred CEEEEEcCCcHHHHHHHHHHHHCcCEEEEecC
Confidence 47999999999999999999888998877654
|
| >d2b4ro1 c.2.1.3 (O:4-152,O:319-335) Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) {Malaria parasite (Plasmodium falciparum) [TaxId: 5833]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Glyceraldehyde-3-phosphate dehydrogenase (GAPDH) species: Malaria parasite (Plasmodium falciparum) [TaxId: 5833]
Probab=85.76 E-value=2 Score=31.20 Aligned_cols=95 Identities=18% Similarity=0.115 Sum_probs=58.5
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeC---ChhhHHHHHHHcCC-----C-e----------------eEecCCc
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAG---SKDKIDLLKNKFGF-----D-E----------------AFNYKEE 208 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~---s~~~~~~~~~~~g~-----~-~----------------v~~~~~~ 208 (342)
+|.|.|- |-+|.++.+.+... ..+|+++-. +.+...++- ++.- . . ++..+++
T Consensus 2 kigINGf-GRIGR~v~R~~~~~~~~~iv~INd~~~d~~~~ayLl-kyDS~hG~~~~~v~~~~~~l~i~~~~I~i~~~~~p 79 (166)
T d2b4ro1 2 KLGINGF-GRIGRLVFRAAFGRKDIEVVAINDPFMDLNHLCYLL-KYDSVHGQFPCEVTHADGFLLIGEKKVSVFAEKDP 79 (166)
T ss_dssp EEEEECC-SHHHHHHHHHHHTCSSEEEEEEECTTCCHHHHHHHH-HCCTTTCSCSSCEEEETTEEEESSCEEEEECCSSG
T ss_pred eEEEECC-CHHHHHHHHHHhhCCCcEEEEECCCCCChHHhhhhh-hcccccccceeeeccCCceEEecCcEEEEEeCCCh
Confidence 6889997 99999999888654 457777753 235555555 3321 0 0 0111111
Q ss_pred hhHHHHHHHHCCCCccEEEeCCCh-hhHHHHHHhhhhCCEEEEEceecc
Q 019332 209 PDLNEALKRYFPEGIDIYFENVGG-KMLDAVLLNMKIHGRIAVCGMISQ 256 (342)
Q Consensus 209 ~~~~~~i~~~~~~~~d~vid~~g~-~~~~~~~~~l~~~G~~v~~g~~~~ 256 (342)
.+.-++. -++|+|+||.|. ...+.+..+|..+.+-|.+..+..
T Consensus 80 ---~~i~W~~--~gvdiViEcTG~f~~~~~~~~hl~~gakkViiSAP~k 123 (166)
T d2b4ro1 80 ---SQIPWGK--CQVDVVCESTGVFLTKELASSHLKGGAKKVIMSAPPK 123 (166)
T ss_dssp ---GGCCHHH--HTCSEEEECSSSCCSHHHHTHHHHTTCSEEEESSCCS
T ss_pred ---HHccccc--cCCCEEEEecccccchhhhhhhhccCCCEEEEecccc
Confidence 1111110 169999999998 677788889988865565655443
|
| >d1fl2a1 c.3.1.5 (A:212-325,A:452-521) Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Alkyl hydroperoxide reductase subunit F (AhpF), C-terminal domains species: Escherichia coli [TaxId: 562]
Probab=85.68 E-value=0.37 Score=35.64 Aligned_cols=29 Identities=17% Similarity=0.194 Sum_probs=26.4
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAG 185 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~ 185 (342)
|+|+|| |+.|+.++..+...|.+|.++.+
T Consensus 4 ViIIGg-GpaGl~AAi~aar~G~~v~iie~ 32 (184)
T d1fl2a1 4 VLIVGS-GPAGAAAAIYSARKGIRTGLMGE 32 (184)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEECS
T ss_pred EEEECc-CHHHHHHHHHHHHcCCeEEEEEE
Confidence 789997 99999999999999999998874
|
| >d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase, C-terminal domain {Methylophilus methylotrophus, w3a1 [TaxId: 17]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Trimethylamine dehydrogenase, C-terminal domain species: Methylophilus methylotrophus, w3a1 [TaxId: 17]
Probab=85.44 E-value=0.8 Score=32.87 Aligned_cols=48 Identities=17% Similarity=0.039 Sum_probs=39.1
Q ss_pred hhhHHHhhhhhcCCCCCCEEEEe--cCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 137 GMTAYAGFYEVCSPKQGECVFIS--AASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 137 ~~ta~~al~~~~~~~~~~~vlI~--ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
.+|...+|. .+..++..++|. |+ |-+|+-+++.+...|++|+.+.+.+
T Consensus 25 v~t~~d~l~--~~~~~~~~vvi~d~gg-g~ig~e~A~~la~~G~~Vtlv~~~~ 74 (156)
T d1djqa2 25 QLTPEQVMD--GKKKIGKRVVILNADT-YFMAPSLAEKLATAGHEVTIVSGVH 74 (156)
T ss_dssp EECHHHHHH--TCSCCCSEEEEEECCC-SSHHHHHHHHHHHTTCEEEEEESSC
T ss_pred EECHHHHhc--CccccCCceEEEecCC-ChHHHHHHHHHHHcCCeEEEEecCC
Confidence 457777763 567788888887 54 8899999999999999999999765
|
| >d3c96a1 c.3.1.2 (A:4-182,A:294-402) Monooxygenase PhzS {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Monooxygenase PhzS species: Pseudomonas aeruginosa [TaxId: 287]
Probab=85.35 E-value=0.51 Score=37.31 Aligned_cols=32 Identities=22% Similarity=0.122 Sum_probs=27.6
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 187 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~ 187 (342)
.|+|+|| |..|++++.+++..|. +|.+..+++
T Consensus 3 ~V~IvGa-G~aGl~~A~~L~~~Gi~~V~V~Er~~ 35 (288)
T d3c96a1 3 DILIAGA-GIGGLSCALALHQAGIGKVTLLESSS 35 (288)
T ss_dssp EEEEECC-SHHHHHHHHHHHHTTCSEEEEEESSS
T ss_pred EEEEECc-CHHHHHHHHHHHhCCCCeEEEEeCCC
Confidence 5899997 9999999999999997 888877654
|
| >d1trba1 c.3.1.5 (A:1-118,A:245-316) Thioredoxin reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Thioredoxin reductase species: Escherichia coli [TaxId: 562]
Probab=85.32 E-value=0.21 Score=37.54 Aligned_cols=35 Identities=17% Similarity=0.171 Sum_probs=29.7
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
++..|+|+|+ |+.|+.++..+...|.+|+++.+.+
T Consensus 4 k~~dVvIIGG-GpaGl~AA~~~ar~g~~v~iie~~~ 38 (190)
T d1trba1 4 KHSKLLILGS-GPAGYTAAVYAARANLQPVLITGME 38 (190)
T ss_dssp EEEEEEEECC-SHHHHHHHHHHHTTTCCCEEECCSS
T ss_pred CCCcEEEECC-CHHHHHHHHHHHHcCCceEEEEeec
Confidence 3457999997 9999999999999999999887543
|
| >d2fy8a1 c.2.1.9 (A:116-244) Potassium channel-related protein MthK {Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Potassium channel NAD-binding domain domain: Potassium channel-related protein MthK species: Archaeon Methanothermobacter thermautotrophicus [TaxId: 145262]
Probab=85.27 E-value=3.8 Score=27.98 Aligned_cols=90 Identities=12% Similarity=-0.027 Sum_probs=58.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChhh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGKM 234 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~~ 234 (342)
.++|.|. |.+|..+++.++ +.+|+++..++++.+.++ ..|.. ++..+. .-.+.+++..-..++.++-+...+.
T Consensus 2 HivI~G~-g~~g~~l~~~L~--~~~i~vi~~d~~~~~~~~-~~~~~-~i~Gd~--~~~~~L~~a~i~~A~~vi~~~~~d~ 74 (129)
T d2fy8a1 2 HVVICGW-SESTLECLRELR--GSEVFVLAEDENVRKKVL-RSGAN-FVHGDP--TRVSDLEKANVRGARAVIVNLESDS 74 (129)
T ss_dssp CEEEESC-CHHHHHHHHTSC--GGGEEEEESCTTHHHHHH-HTTCE-EEESCT--TSHHHHHHTTCTTCSEEEECCSSHH
T ss_pred EEEEECC-CHHHHHHHHHHc--CCCCEEEEcchHHHHHHH-hcCcc-cccccc--CCHHHHHHhhhhcCcEEEEeccchh
Confidence 3788886 899987777654 456788888888888887 77764 333322 2345566654446888887777632
Q ss_pred ----HHHHHHhhhhCCEEEEE
Q 019332 235 ----LDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 235 ----~~~~~~~l~~~G~~v~~ 251 (342)
.....+.+.|..+++..
T Consensus 75 ~n~~~~~~~r~~~~~~~iia~ 95 (129)
T d2fy8a1 75 ETIHCILGIRKIDESVRIIAE 95 (129)
T ss_dssp HHHHHHHHHHHHCSSSCEEEE
T ss_pred hhHHHHHHHHHHCCCceEEEE
Confidence 22344556667666654
|
| >d1dxla1 c.3.1.5 (A:4-152,A:276-347) Dihydrolipoamide dehydrogenase {Garden pea (Pisum sativum) [TaxId: 3888]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Garden pea (Pisum sativum) [TaxId: 3888]
Probab=85.17 E-value=0.4 Score=36.61 Aligned_cols=30 Identities=23% Similarity=0.173 Sum_probs=26.9
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
|+|+|+ |+.|+.++..+..+|.+|+++...
T Consensus 6 vvVIGg-GpaGl~aA~~aa~~G~kV~vie~~ 35 (221)
T d1dxla1 6 VVIIGG-GPGGYVAAIKAAQLGFKTTCIEKR 35 (221)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEEECS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEec
Confidence 788897 999999999999999999999864
|
| >d1fcda1 c.3.1.5 (A:1-114,A:256-327) Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit {Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Flavocytochrome c sulfide dehydrogenase, FCSD, flavin-binding subunit species: Purple phototrophic bacterium (Chromatium vinosum) [TaxId: 1049]
Probab=85.17 E-value=0.6 Score=34.08 Aligned_cols=35 Identities=20% Similarity=0.239 Sum_probs=28.2
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcC--CEEEEEeCCh
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLG--CYVVGSAGSK 187 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~g--a~Vi~~~~s~ 187 (342)
.|.+|+|.|| |.+|+.+++.++..+ .+|+++.+++
T Consensus 1 ~gkrivIvGg-G~~G~e~A~~l~~~~~~~~Vtlie~~~ 37 (186)
T d1fcda1 1 AGRKVVVVGG-GTGGATAAKYIKLADPSIEVTLIEPNT 37 (186)
T ss_dssp CCCEEEEECC-SHHHHHHHHHHHHHCTTSEEEEECSCS
T ss_pred CCCcEEEECc-cHHHHHHHHHHHHcCCCCcEEEEECCC
Confidence 4789999997 999998888887776 4788887654
|
| >d1g6q1_ c.66.1.6 (1:) Arginine methyltransferase, HMT1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arginine methyltransferase domain: Arginine methyltransferase, HMT1 species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=85.10 E-value=0.42 Score=39.43 Aligned_cols=92 Identities=25% Similarity=0.164 Sum_probs=50.9
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCChhhHHHHHH---HcCCC---eeEecCCchhHHHHHHHHCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSKDKIDLLKN---KFGFD---EAFNYKEEPDLNEALKRYFP 220 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~~~~~~~~~---~~g~~---~v~~~~~~~~~~~~i~~~~~ 220 (342)
..+.+|.+||-.|. |.|..++.+|+ .|+ +|+++..++ ....+++ +.+.. .++..+-. ++ .+..
T Consensus 34 ~~~~~~~~VLDlGc--GtG~ls~~aa~-~Ga~~V~avd~s~-~~~~a~~~~~~~~~~~~i~~i~~~~~-~l-----~~~~ 103 (328)
T d1g6q1_ 34 KDLFKDKIVLDVGC--GTGILSMFAAK-HGAKHVIGVDMSS-IIEMAKELVELNGFSDKITLLRGKLE-DV-----HLPF 103 (328)
T ss_dssp HHHHTTCEEEEETC--TTSHHHHHHHH-TCCSEEEEEESST-HHHHHHHHHHHTTCTTTEEEEESCTT-TS-----CCSS
T ss_pred cccCCcCEEEEeCC--CCCHHHHHHHH-hCCCEEEEEeCCH-HHHHHHHHHHHhCccccceEEEeehh-hc-----cCcc
Confidence 34567899999985 45666655554 577 899999775 2333321 33432 12322211 11 1112
Q ss_pred CCccEEEeCC-C----h-h----hHHHHHHhhhhCCEEE
Q 019332 221 EGIDIYFENV-G----G-K----MLDAVLLNMKIHGRIA 249 (342)
Q Consensus 221 ~~~d~vid~~-g----~-~----~~~~~~~~l~~~G~~v 249 (342)
+.+|+|+... + . . .+...-+.|+|+|+++
T Consensus 104 ~~~D~i~se~~~~~~~~e~~~~~~~~a~~r~LkpgG~ii 142 (328)
T d1g6q1_ 104 PKVDIIISEWMGYFLLYESMMDTVLYARDHYLVEGGLIF 142 (328)
T ss_dssp SCEEEEEECCCBTTBSTTCCHHHHHHHHHHHEEEEEEEE
T ss_pred cceeEEEEEecceeeccchhHHHHHHHHHhccCCCeEEE
Confidence 3689886521 1 1 1 2334447899999985
|
| >d1q1ra1 c.3.1.5 (A:2-114,A:248-319) Putidaredoxin reductase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Putidaredoxin reductase species: Pseudomonas putida [TaxId: 303]
Probab=84.79 E-value=0.4 Score=35.40 Aligned_cols=32 Identities=19% Similarity=0.026 Sum_probs=26.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEe
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLGCYVVGSA 184 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~ 184 (342)
++++|+|.|+ |.+|+-++.-++.+|.++.++.
T Consensus 2 ~~~~VvIIGg-G~~G~e~A~~l~~~g~~v~v~~ 33 (185)
T d1q1ra1 2 ANDNVVIVGT-GLAGVEVAFGLRASGWEGNIRL 33 (185)
T ss_dssp CSCEEEEECC-SHHHHHHHHHHHHTTCCSEEEE
T ss_pred CCCCEEEECC-cHHHHHHHHHHHHcCCceEEEE
Confidence 5789999997 9999998888898888654443
|
| >d1sqga2 c.66.1.38 (A:145-428) Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: NOL1/NOP2/sun domain: Ribosomal RNA small subunit methyltransferase B, RsmB (Sun, Fmu/Fmv), C-terminal domain species: Escherichia coli [TaxId: 562]
Probab=84.76 E-value=3.1 Score=33.11 Aligned_cols=98 Identities=14% Similarity=0.212 Sum_probs=57.4
Q ss_pred cCCCCCCEEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHH---HcCCCe-eEecCCchhHHHHHHHHCCCC
Q 019332 148 CSPKQGECVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKN---KFGFDE-AFNYKEEPDLNEALKRYFPEG 222 (342)
Q Consensus 148 ~~~~~~~~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~---~~g~~~-v~~~~~~~~~~~~i~~~~~~~ 222 (342)
...++|++||=..| ++=|.. .+++... +.+|++.+.++.|...+++ ++|... ++...+. ... .....+.
T Consensus 98 L~~~~g~~vLD~CA-aPGgKt-~~la~l~~~~~i~a~d~~~~R~~~l~~~~~r~g~~~~~~~~~~~-~~~---~~~~~~~ 171 (284)
T d1sqga2 98 LAPQNGEHILDLCA-APGGKT-THILEVAPEAQVVAVDIDEQRLSRVYDNLKRLGMKATVKQGDGR-YPS---QWCGEQQ 171 (284)
T ss_dssp HCCCTTCEEEEESC-TTCHHH-HHHHHHCTTCEEEEEESSTTTHHHHHHHHHHTTCCCEEEECCTT-CTH---HHHTTCC
T ss_pred cCccccceeEeccC-ccccch-hhhhhhhhhhhhhhhhcchhhhhhHhhhhhcccccceeeecccc-ccc---hhccccc
Confidence 46789999986654 333332 2444333 4689999999998866643 567743 3333322 211 1122236
Q ss_pred ccEE-Ee--CCChh--------------------------hHHHHHHhhhhCCEEEEE
Q 019332 223 IDIY-FE--NVGGK--------------------------MLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 223 ~d~v-id--~~g~~--------------------------~~~~~~~~l~~~G~~v~~ 251 (342)
||.| +| |.|.. .+..+++.++++|++|..
T Consensus 172 fd~IL~DaPCSg~G~~rr~p~~~~~~~~~~~~~l~~lQ~~iL~~a~~~lk~gG~lvYs 229 (284)
T d1sqga2 172 FDRILLDAPCSATGVIRRHPDIKWLRRDRDIPELAQLQSEILDAIWPHLKTGGTLVYA 229 (284)
T ss_dssp EEEEEEECCCCCGGGTTTCTTHHHHCCTTHHHHHHHHHHHHHHHHGGGEEEEEEEEEE
T ss_pred ccEEEEeccccccCccccccchhhccccchhhHHHHHHHHHHHHHHHhcCCCceEEEe
Confidence 8876 55 55532 245567788999987743
|
| >d1edza1 c.2.1.7 (A:149-319) Methylenetetrahydrofolate dehydrogenase/cyclohydrolase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Aminoacid dehydrogenase-like, C-terminal domain domain: Methylenetetrahydrofolate dehydrogenase/cyclohydrolase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=84.70 E-value=0.42 Score=35.28 Aligned_cols=94 Identities=14% Similarity=0.052 Sum_probs=59.8
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCC------ee---EecCCchhHHHHHHHHCCC
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFD------EA---FNYKEEPDLNEALKRYFPE 221 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~------~v---~~~~~~~~~~~~i~~~~~~ 221 (342)
-.|.+++|.|-+.-+|.=+..++...||.|+...++... .+ ..+.+ .+ -.+... .+.+.+++
T Consensus 27 l~GK~vvVIGrS~iVG~Pla~lL~~~gaTVt~~~~~~~~-~~---~~~~~~~~~~~~~~~~~~~~~~-~lk~~~~~---- 97 (171)
T d1edza1 27 LYGKKCIVINRSEIVGRPLAALLANDGATVYSVDVNNIQ-KF---TRGESLKLNKHHVEDLGEYSED-LLKKCSLD---- 97 (171)
T ss_dssp TTTCEEEEECCCTTTHHHHHHHHHTTSCEEEEECSSEEE-EE---ESCCCSSCCCCEEEEEEECCHH-HHHHHHHH----
T ss_pred CCCCEEEEECCccccHHHHHHHHHHCCCEEEEecccccc-cc---ccccceeeeeeccccccccchh-HHhhcccc----
Confidence 468899999998899998888888889999765533211 11 01111 11 112221 23333333
Q ss_pred CccEEEeCCChhhHHHHHHhhhhCCEEEEEcee
Q 019332 222 GIDIYFENVGGKMLDAVLLNMKIHGRIAVCGMI 254 (342)
Q Consensus 222 ~~d~vid~~g~~~~~~~~~~l~~~G~~v~~g~~ 254 (342)
.|+++-++|.+.+.---+.+++|..++.+|..
T Consensus 98 -aDIvIsavG~p~~~i~~d~ik~GavvIDvGi~ 129 (171)
T d1edza1 98 -SDVVITGVPSENYKFPTEYIKEGAVCINFACT 129 (171)
T ss_dssp -CSEEEECCCCTTCCBCTTTSCTTEEEEECSSS
T ss_pred -CCEEEEccCCCccccChhhcccCceEeecccc
Confidence 89999999985543334578888888998864
|
| >d1i36a2 c.2.1.6 (A:1-152) Conserved hypothetical protein MTH1747 {Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: Conserved hypothetical protein MTH1747 species: Archaeon Methanobacterium thermoautotrophicum [TaxId: 145262]
Probab=84.65 E-value=2.7 Score=29.79 Aligned_cols=66 Identities=15% Similarity=0.058 Sum_probs=43.4
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCChh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGGK 233 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~~ 233 (342)
+|.|+|. |-+|.+.+.-+...|.+|++..+++.+....+ ..+... .+.. .+.++ ..|+||-|+..+
T Consensus 2 kIgiIG~-G~mG~~ia~~l~~~g~~v~~~~~~~~~~~~~~-~~~~~~-~~~~-----~e~~~-----~~diIi~~v~~~ 67 (152)
T d1i36a2 2 RVGFIGF-GEVAQTLASRLRSRGVEVVTSLEGRSPSTIER-ARTVGV-TETS-----EEDVY-----SCPVVISAVTPG 67 (152)
T ss_dssp EEEEESC-SHHHHHHHHHHHHTTCEEEECCTTCCHHHHHH-HHHHTC-EECC-----HHHHH-----TSSEEEECSCGG
T ss_pred EEEEEcH-HHHHHHHHHHHHHCCCeEEEEcCchhHHHHHh-hhcccc-cccH-----HHHHh-----hcCeEEEEecCc
Confidence 5788885 99999998888888999988877665544443 333321 2221 12222 278888888774
|
| >d2gqfa1 c.3.1.8 (A:1-194,A:343-401) Hypothetical protein HI0933 {Haemophilus influenzae [TaxId: 727]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Hypothetical protein HI0933 species: Haemophilus influenzae [TaxId: 727]
Probab=84.53 E-value=0.44 Score=37.46 Aligned_cols=32 Identities=28% Similarity=0.225 Sum_probs=28.0
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
|+|+|| |+.|++++..+...|.+|.++..++.
T Consensus 7 ViIIGa-G~aGl~aA~~la~~G~~V~vlEk~~~ 38 (253)
T d2gqfa1 7 NIIIGA-GAAGLFCAAQLAKLGKSVTVFDNGKK 38 (253)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEecCCC
Confidence 889997 99999988888888999999997764
|
| >d1f06a1 c.2.1.3 (A:1-118,A:269-320) Diaminopimelic acid dehydrogenase (DAPDH) {Corynebacterium glutamicum [TaxId: 1718]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: Diaminopimelic acid dehydrogenase (DAPDH) species: Corynebacterium glutamicum [TaxId: 1718]
Probab=84.50 E-value=1.3 Score=32.41 Aligned_cols=82 Identities=13% Similarity=0.147 Sum_probs=53.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeCCCh-
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFENVGG- 232 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~~g~- 232 (342)
+|.|+|. |.+|...+...+.. ++++++++....+ ......+..+.+. . .. ...+|+|+.|.+.
T Consensus 5 rvgiiG~-G~ig~~~~~~l~~~~~~elvav~~~~~~------~~~~~~~~~~~~~---~----~~-~~~~D~Vvi~tp~~ 69 (170)
T d1f06a1 5 RVAIVGY-GNLGRSVEKLIAKQPDMDLVGIFSRRAT------LDTKTPVFDVADV---D----KH-ADDVDVLFLCMGSA 69 (170)
T ss_dssp EEEEECC-SHHHHHHHHHHTTCSSEEEEEEEESSSC------CSSSSCEEEGGGG---G----GT-TTTCSEEEECSCTT
T ss_pred eEEEECC-hHHHHHHHHHHHhCCCcEEEEEEecccc------cccccccccchhh---h----hh-ccccceEEEeCCCc
Confidence 6899995 99998877777655 5688776654432 1111122222221 1 11 1259999999998
Q ss_pred hhHHHHHHhhhhCCEEEEE
Q 019332 233 KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 233 ~~~~~~~~~l~~~G~~v~~ 251 (342)
...+.+.++|..|-.++..
T Consensus 70 ~h~~~a~~aL~aG~~vv~~ 88 (170)
T d1f06a1 70 TDIPEQAPKFAQFACTVDT 88 (170)
T ss_dssp THHHHHHHHHTTTSEEECC
T ss_pred ccHHHHHHHHHCCCcEEEe
Confidence 6788999999999887753
|
| >d2bi7a1 c.4.1.3 (A:2-247,A:317-384) UDP-galactopyranose mutase, N-terminal domain {Klebsiella pneumoniae [TaxId: 573]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Nucleotide-binding domain superfamily: Nucleotide-binding domain family: UDP-galactopyranose mutase, N-terminal domain domain: UDP-galactopyranose mutase, N-terminal domain species: Klebsiella pneumoniae [TaxId: 573]
Probab=84.37 E-value=0.61 Score=38.13 Aligned_cols=34 Identities=21% Similarity=0.209 Sum_probs=29.7
Q ss_pred CCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 153 GECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 153 ~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
..+|+|+|| |..|+.++..+...|.+|.++..++
T Consensus 2 ~KKI~IIGa-G~sGL~aA~~L~k~G~~V~viEk~~ 35 (314)
T d2bi7a1 2 SKKILIVGA-GFSGAVIGRQLAEKGHQVHIIDQRD 35 (314)
T ss_dssp CCEEEEECC-SHHHHHHHHHHHTTTCEEEEEESSS
T ss_pred CCEEEEECC-cHHHHHHHHHHHhCCCCEEEEECCC
Confidence 468999997 9999999988888899999998665
|
| >d1tdja1 c.79.1.1 (A:5-335) Threonine deaminase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: Threonine deaminase species: Escherichia coli [TaxId: 562]
Probab=84.33 E-value=5.4 Score=32.27 Aligned_cols=111 Identities=19% Similarity=0.189 Sum_probs=64.4
Q ss_pred HHHhhhhhcCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCeeEecCC---------
Q 019332 140 AYAGFYEVCSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEAFNYKE--------- 207 (342)
Q Consensus 140 a~~al~~~~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v~~~~~--------- 207 (342)
|++.+.....-.+..+|+. ..+|..|.+++..|+..|.+++++.. +..|.+.++ .+|+.-++....
T Consensus 62 a~~~i~~~~~~~~~~~vv~-assGN~g~a~A~~a~~~g~~~~i~~p~~~~~~k~~~l~-~~Ga~vi~~~~~~~~~~~~~~ 139 (331)
T d1tdja1 62 AYAMMAGLTEEQKAHGVIT-ASAGNHAQGVAFSSARLGVKALIVMPTATADIKVDAVR-GFGGEVLLHGANFDEAKAKAI 139 (331)
T ss_dssp HHHHHHTTTTSSCSSSCEE-EECSSSHHHHHHHHHHTTCCEEEECCSSCCHHHHHHHH-HHSCEEECCCSSHHHHHHHHH
T ss_pred HHHHHHHHHHhCCCCeeee-cccchhHHHHHHhhccccccceeeccccchhHHHHHHH-hcCCEEEEcCcccccchhhhh
Confidence 4444433332234444444 44688999999999999997666654 345667777 888843321111
Q ss_pred ----------------c------hhHHHHHHHHCCCCccEEEeCCCh-hhHH---HHHHhhhhCCEEEEEce
Q 019332 208 ----------------E------PDLNEALKRYFPEGIDIYFENVGG-KMLD---AVLLNMKIHGRIAVCGM 253 (342)
Q Consensus 208 ----------------~------~~~~~~i~~~~~~~~d~vid~~g~-~~~~---~~~~~l~~~G~~v~~g~ 253 (342)
+ .....++.+.. +.+|.++-++|+ ..+. ..++.+.+..+++.+..
T Consensus 140 ~~~~~~~~~~~~~~~~~~~~~g~~t~~~Ei~~q~-~~~D~vv~~~G~GG~~aG~~~~~~~~~~~~~ii~ve~ 210 (331)
T d1tdja1 140 ELSQQQGFTWVPPFDHPMVIAGQGTLALELLQQD-AHLDRVFVPVGGGGLAAGVAVLIKQLMPQIKVIAVEA 210 (331)
T ss_dssp HHHHHHCCEECCSSCCHHHHHHHHHHHHHHHHHC-TTCCEEEEECSSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred hhhhcCCCccccccCChHHhhhhhhHHHHHHHhc-CCCCEEEEeCChhHHHHHHHHHHHHhCCCcEEEEecc
Confidence 0 11233333332 258999998887 4433 44455566778876643
|
| >d1euca1 c.2.1.8 (A:1-130) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Pig (Sus scrofa) [TaxId: 9823]
Probab=84.25 E-value=4.7 Score=27.64 Aligned_cols=90 Identities=20% Similarity=0.217 Sum_probs=56.0
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+.++.+|+|.|.+|.-|..-.+.+..+|-+|++-+...+.-+. -.|. .++| ...+.+++ + ++|.-+-+
T Consensus 12 i~k~TrVivQGiTG~~G~~ht~~m~~YGT~iVaGVtPgKgG~~---~~gi-PVf~-----tV~eA~~~-~--~~daSvIf 79 (130)
T d1euca1 12 VDKNTKVICQGFTGKQGTFHSQQALEYGTNLVGGTTPGKGGKT---HLGL-PVFN-----TVKEAKEQ-T--GATASVIY 79 (130)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCE---ETTE-EEES-----SHHHHHHH-H--CCCEEEEC
T ss_pred EcCCCeEEEEcCCCcHHHHHHHHHHHhcCCeEEeeccCCCCcc---ccCc-cchh-----hHHHHHHh-c--CCcEEEEe
Confidence 5678899999999999999999999999998877743322111 1111 2333 23333332 2 35665556
Q ss_pred CCh-hhHHHHHHhhhhCCEEEEE
Q 019332 230 VGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 230 ~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.. ...+.+++++..+=+++.+
T Consensus 80 VPp~~a~dAi~EAi~agI~liV~ 102 (130)
T d1euca1 80 VPPPFAAAAINEAIDAEVPLVVC 102 (130)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred cCHHHHHHHHHHHHhCCCCEEEE
Confidence 665 4455666677666554433
|
| >d2g17a1 c.2.1.3 (A:1-153,A:309-334) N-acetyl-gamma-glutamyl-phosphate reductase ArgC {Salmonella typhimurium [TaxId: 90371]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain domain: N-acetyl-gamma-glutamyl-phosphate reductase ArgC species: Salmonella typhimurium [TaxId: 90371]
Probab=84.23 E-value=1.2 Score=32.89 Aligned_cols=91 Identities=15% Similarity=0.151 Sum_probs=50.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHc-CCEEEEEeCCh------hhHHHHHHHc-CC-C-eeEecCCchhHHHHHHHHCCCCcc
Q 019332 155 CVFISAASGAVGQLVGQFAKLL-GCYVVGSAGSK------DKIDLLKNKF-GF-D-EAFNYKEEPDLNEALKRYFPEGID 224 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~-ga~Vi~~~~s~------~~~~~~~~~~-g~-~-~v~~~~~~~~~~~~i~~~~~~~~d 224 (342)
+|.|.||+|-+|+-.++++..+ ..++..+..+. ++.......+ +. + ......+. ......+|
T Consensus 3 kVaIiGATGyvG~eLlrlL~~HP~~ei~~l~~~s~~~~aGk~~~~~~~~~~~~~~~~~~~~~~~--------~~~~~~~d 74 (179)
T d2g17a1 3 NTLIVGASGYAGAELVSYVNRHPHMTITALTVSAQSNDAGKLISDLHPQLKGIVDLPLQPMSDV--------RDFSADVD 74 (179)
T ss_dssp EEEEETTTSHHHHHHHHHHHHCTTEEEEEEEEETTCTTTTCBHHHHCGGGTTTCCCBEEEESCG--------GGTCTTCC
T ss_pred EEEEECcccHHHHHHHHHHHhCCCCceEeeEeecccccccccccccccccccccccccccchhh--------hhhhcccc
Confidence 6899999999999999999887 56765443211 1222111011 11 1 11111111 01112589
Q ss_pred EEEeCCChhhHHHHHHh-hhhCCEEEEEce
Q 019332 225 IYFENVGGKMLDAVLLN-MKIHGRIAVCGM 253 (342)
Q Consensus 225 ~vid~~g~~~~~~~~~~-l~~~G~~v~~g~ 253 (342)
++|-|.+.......... +..+-+++..+.
T Consensus 75 vvf~alp~~~s~~~~~~~~~~~~~vIDlSa 104 (179)
T d2g17a1 75 VVFLATAHEVSHDLAPQFLQAGCVVFDLSG 104 (179)
T ss_dssp EEEECSCHHHHHHHHHHHHHTTCEEEECSS
T ss_pred eeeccccchhHHHHhhhhhhcCceeecccc
Confidence 99999998554444444 455556666543
|
| >d2i0za1 c.3.1.8 (A:1-192,A:362-420) Flavoprotein BC4706 {Bacillus cereus [TaxId: 1396]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: HI0933 N-terminal domain-like domain: Flavoprotein BC4706 species: Bacillus cereus [TaxId: 1396]
Probab=84.19 E-value=0.47 Score=37.03 Aligned_cols=32 Identities=19% Similarity=0.158 Sum_probs=27.3
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCChh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSKD 188 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~ 188 (342)
|+|+|| |..|++++..+...|.+|+++.+++.
T Consensus 5 ViIIGa-G~aGl~aA~~la~~G~~V~liEk~~~ 36 (251)
T d2i0za1 5 VIVIGG-GPSGLMAAIGAAEEGANVLLLDKGNK 36 (251)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEECSSSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCcEEEEeCCCC
Confidence 789997 99999888777788999999987653
|
| >d1gtea3 c.3.1.1 (A:288-440) Dihydropyrimidine dehydrogenase, domain 3 {Pig (Sus scrofa) [TaxId: 9823]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: C-terminal domain of adrenodoxin reductase-like domain: Dihydropyrimidine dehydrogenase, domain 3 species: Pig (Sus scrofa) [TaxId: 9823]
Probab=83.74 E-value=0.94 Score=32.58 Aligned_cols=36 Identities=17% Similarity=-0.008 Sum_probs=29.0
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 187 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~ 187 (342)
..+.+|+|+|+ |-+|.=.+..+..+|+ +|+.+.+.+
T Consensus 43 ~~~~kVvVIGG-GdtA~D~A~~a~r~GA~~V~vi~rr~ 79 (153)
T d1gtea3 43 SIRGAVIVLGA-GDTAFDCATSALRCGARRVFLVFRKG 79 (153)
T ss_dssp CCCSEEEEECS-SHHHHHHHHHHHHTTCSEEEEECSSC
T ss_pred cCCCEEEEECC-ChhHHHHHHHHHHcCCcceeEEEeCC
Confidence 34678999997 9999988888888898 677877654
|
| >d1r6da_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptomyces venezuelae [TaxId: 54571]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptomyces venezuelae [TaxId: 54571]
Probab=83.71 E-value=0.075 Score=43.93 Aligned_cols=25 Identities=8% Similarity=0.060 Sum_probs=21.5
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCE
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCY 179 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~ 179 (342)
+|||+||+|-+|..+++.+...|.+
T Consensus 2 kIlItG~tGfIG~~l~~~L~~~g~~ 26 (322)
T d1r6da_ 2 RLLVTGGAGFIGSHFVRQLLAGAYP 26 (322)
T ss_dssp EEEEETTTSHHHHHHHHHHHHTSCT
T ss_pred EEEEECCCCHHHHHHHHHHHHCCCC
Confidence 6999999999999999988777653
|
| >d1aoga2 c.3.1.5 (A:170-286) Trypanothione reductase {Trypanosoma cruzi [TaxId: 5693]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Trypanothione reductase species: Trypanosoma cruzi [TaxId: 5693]
Probab=83.16 E-value=0.83 Score=31.07 Aligned_cols=63 Identities=17% Similarity=0.220 Sum_probs=39.1
Q ss_pred CCCEEEEecCCcHHHHHHHHHHHHcC---CEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCC-CccEEE
Q 019332 152 QGECVFISAASGAVGQLVGQFAKLLG---CYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPE-GIDIYF 227 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~~ai~la~~~g---a~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~-~~d~vi 227 (342)
..++++|.|+ |.+|.-++..++.++ .+|+.+.+++. .+. . + ++ +..+.+.+.... |+++.+
T Consensus 19 ~p~~v~ivGg-G~ig~E~A~~l~~l~~~~~~Vtli~~~~~---iL~-~------~---d~-~~~~~l~~~l~~~GV~v~~ 83 (117)
T d1aoga2 19 PPRRVLTVGG-GFISVEFAGIFNAYKPKDGQVTLCYRGEM---ILR-G------F---DH-TLREELTKQLTANGIQILT 83 (117)
T ss_dssp CCSEEEEECS-SHHHHHHHHHHHHHCCTTCEEEEEESSSS---SST-T------S---CH-HHHHHHHHHHHHTTCEEEE
T ss_pred cCCeEEEECC-cHHHHHHHHHhhhcccCCcEEEEEeccch---hhc-c------c---ch-HHHHHHHHHHHhcCcEEEc
Confidence 3478999997 999987776666554 47888886542 111 1 1 22 455555544433 688777
Q ss_pred eC
Q 019332 228 EN 229 (342)
Q Consensus 228 d~ 229 (342)
++
T Consensus 84 ~~ 85 (117)
T d1aoga2 84 KE 85 (117)
T ss_dssp SC
T ss_pred CC
Confidence 64
|
| >d1b5qa1 c.3.1.2 (A:5-293,A:406-463) Polyamine oxidase {Maize (Zea mays) [TaxId: 4577]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Polyamine oxidase species: Maize (Zea mays) [TaxId: 4577]
Probab=82.47 E-value=0.53 Score=36.71 Aligned_cols=32 Identities=16% Similarity=0.114 Sum_probs=26.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCC-EEEEEeCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGC-YVVGSAGSK 187 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga-~Vi~~~~s~ 187 (342)
.|+|+|| |..|+.++..++..|. +|+++..++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~~V~vlE~~~ 34 (347)
T d1b5qa1 2 RVIVVGA-GMSGISAAKRLSEAGITDLLILEATD 34 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHHTTCCCEEEECSSS
T ss_pred CEEEECC-cHHHHHHHHHHHhCCCCcEEEEECCC
Confidence 4899997 9999998888888897 698887654
|
| >d1u8xx1 c.2.1.5 (X:3-169) Maltose-6'-phosphate glucosidase GlvA {Bacillus subtilis [TaxId: 1423]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Maltose-6'-phosphate glucosidase GlvA species: Bacillus subtilis [TaxId: 1423]
Probab=82.46 E-value=4.6 Score=29.18 Aligned_cols=73 Identities=16% Similarity=0.172 Sum_probs=41.5
Q ss_pred CCCEEEEecCCcHHHH--HHHHHHHHc-C---CEEEEEeCChhhHHHHHH-------HcCCCeeEecCCchhHHHHHHHH
Q 019332 152 QGECVFISAASGAVGQ--LVGQFAKLL-G---CYVVGSAGSKDKIDLLKN-------KFGFDEAFNYKEEPDLNEALKRY 218 (342)
Q Consensus 152 ~~~~vlI~ga~g~vG~--~ai~la~~~-g---a~Vi~~~~s~~~~~~~~~-------~~g~~~v~~~~~~~~~~~~i~~~ 218 (342)
+.-+|.|.|| |++|. +...+++.. . .+++..+.+++|.+...+ ..+....+.... +..+.++
T Consensus 2 k~~KI~iIGa-Gsv~~~~~~~~ll~~~~~l~~~eivL~Did~~~~~~~~~~~~~~~~~~~~~~~~~~~~--d~~eal~-- 76 (167)
T d1u8xx1 2 KSFSIVIAGG-GSTFTPGIVLMLLDHLEEFPIRKLKLYDNDKERQDRIAGACDVFIREKAPDIEFAATT--DPEEAFT-- 76 (167)
T ss_dssp CCEEEEEECT-TSSSHHHHHHHHHHTTTTSCEEEEEEECSCHHHHHHHHHHHHHHHHHHCTTSEEEEES--CHHHHHS--
T ss_pred CCceEEEECC-ChhhhHHHHHHHHhhhhhcCCCEEEEEcCChhHHHHHHHHHHHHHHHhCCCcceEecC--ChhhccC--
Confidence 3457889997 65553 344444433 2 379999988887652211 224332222222 3333442
Q ss_pred CCCCccEEEeCCCh
Q 019332 219 FPEGIDIYFENVGG 232 (342)
Q Consensus 219 ~~~~~d~vid~~g~ 232 (342)
+.|+|+.++|-
T Consensus 77 ---~AD~Vvitag~ 87 (167)
T d1u8xx1 77 ---DVDFVMAHIRV 87 (167)
T ss_dssp ---SCSEEEECCCT
T ss_pred ---CCCEEEECCCc
Confidence 59999999984
|
| >d2dw4a2 c.3.1.2 (A:274-654,A:764-831) Lysine-specific histone demethylase 1, LSD1 {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Lysine-specific histone demethylase 1, LSD1 species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.23 E-value=0.89 Score=36.90 Aligned_cols=36 Identities=19% Similarity=0.169 Sum_probs=30.1
Q ss_pred CCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 151 KQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 151 ~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
++..+|+|+|| |-.|+.++..+...|.+|.+...++
T Consensus 3 ~~~~kViVIGa-G~aGL~aA~~L~~~G~~V~VlEa~~ 38 (449)
T d2dw4a2 3 KKTGKVIIIGS-GVSGLAAARQLQSFGMDVTLLEARD 38 (449)
T ss_dssp SCCCEEEEECC-BHHHHHHHHHHHHTTCEEEEECSSS
T ss_pred CCCCcEEEECC-CHHHHHHHHHHHhCCCCEEEEeCCC
Confidence 34567999997 9999999998988999999887543
|
| >d1gesa1 c.3.1.5 (A:3-146,A:263-335) Glutathione reductase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Glutathione reductase species: Escherichia coli [TaxId: 562]
Probab=82.22 E-value=0.62 Score=35.46 Aligned_cols=30 Identities=13% Similarity=-0.002 Sum_probs=27.0
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
|+|+|+ |+.|+.++..|..+|.+|.++.+.
T Consensus 5 vvVIG~-G~aG~~aA~~a~~~G~kV~iiE~~ 34 (217)
T d1gesa1 5 YIAIGG-GSGGIASINRAAMYGQKCALIEAK 34 (217)
T ss_dssp EEEECC-SHHHHHHHHHHHTTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecc
Confidence 789997 999999999999999999999764
|
| >d1pgja2 c.2.1.6 (A:1-178) 6-phosphogluconate dehydrogenase {Trypanosoma brucei [TaxId: 5691]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: 6-phosphogluconate dehydrogenase species: Trypanosoma brucei [TaxId: 5691]
Probab=82.20 E-value=3.7 Score=29.85 Aligned_cols=43 Identities=16% Similarity=0.004 Sum_probs=36.0
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGF 199 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~ 199 (342)
+|-|+|. |.+|...+.-+...|.+|++..+++++.+.+. +.+.
T Consensus 3 kIGvIGl-G~MG~~ma~~L~~~G~~V~~~dr~~~~~~~l~-~~~~ 45 (178)
T d1pgja2 3 DVGVVGL-GVMGANLALNIAEKGFKVAVFNRTYSKSEEFM-KANA 45 (178)
T ss_dssp SEEEECC-SHHHHHHHHHHHHTTCCEEEECSSHHHHHHHH-HHTT
T ss_pred EEEEEee-hHHHHHHHHHHHHCCCeEEEEECCHHHHHHHH-HcCC
Confidence 3778885 99999888888888999999999999998887 4443
|
| >d2a14a1 c.66.1.15 (A:5-261) Indolethylamine N-methyltransferase, INMT {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: S-adenosyl-L-methionine-dependent methyltransferases superfamily: S-adenosyl-L-methionine-dependent methyltransferases family: Arylamine N-methyltransferase domain: Indolethylamine N-methyltransferase, INMT species: Human (Homo sapiens) [TaxId: 9606]
Probab=82.13 E-value=0.27 Score=38.79 Aligned_cols=45 Identities=11% Similarity=-0.156 Sum_probs=31.7
Q ss_pred CCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHH
Q 019332 149 SPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKN 195 (342)
Q Consensus 149 ~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~ 195 (342)
...++.+||=.|. |.|..++.+++..+.+|++++-|+.-.+.+++
T Consensus 48 ~~~~g~~vLDlGc--G~G~~~~~~~~~~~~~v~giD~S~~~i~~a~~ 92 (257)
T d2a14a1 48 GGLQGDTLIDIGS--GPTIYQVLAACDSFQDITLSDFTDRNREELEK 92 (257)
T ss_dssp TSCCEEEEEESSC--TTCCGGGTTGGGTEEEEEEEESCHHHHHHHHH
T ss_pred cCCCCCEEEEECC--CCCHhHHHHhccccCcEEEecCCHHHHHHHHH
Confidence 4567888988885 34555555555444489999999988887764
|
| >d1wkva1 c.79.1.1 (A:2-383) O-acetylserine sulfhydrylase (Cysteine synthase) {Archaeon Aeropyrum pernix [TaxId: 56636]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: O-acetylserine sulfhydrylase (Cysteine synthase) species: Archaeon Aeropyrum pernix [TaxId: 56636]
Probab=81.77 E-value=2.1 Score=35.78 Aligned_cols=61 Identities=18% Similarity=0.092 Sum_probs=42.3
Q ss_pred HHHhhhhh-cCCCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCCee
Q 019332 140 AYAGFYEV-CSPKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFDEA 202 (342)
Q Consensus 140 a~~al~~~-~~~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~~v 202 (342)
|++.+.+. .+++++.+| |-..+|..|++++..|+.+|.+++++.. +++|.+.++ .+|+.-+
T Consensus 130 A~~~i~~A~~~~~~g~~V-VeaSSGN~GiAlA~~aa~lGik~~Iv~P~~~~~~K~~~ir-a~GAeVi 194 (382)
T d1wkva1 130 AVEIISRLSRRVEKGSLV-ADATSSNFGVALSAVARLYGYRARVYLPGAAEEFGKLLPR-LLGAQVI 194 (382)
T ss_dssp HHHHHHHHTTTSCTTCEE-EEECCHHHHHHHHHHHHHTTCEEEEEEETTSCHHHHHHHH-HTTCEEE
T ss_pred HHHHHHHHHhccCCCCEE-EEeCCcHHHHHHHHHHHHcCCCEEEEeecccccccccccc-ccCccee
Confidence 44444332 356777754 5555799999999999999997665554 446777777 8998543
|
| >d2ivda1 c.3.1.2 (A:10-306,A:415-464) Protoporphyrinogen oxidase {Myxococcus xanthus [TaxId: 34]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD-linked reductases, N-terminal domain domain: Protoporphyrinogen oxidase species: Myxococcus xanthus [TaxId: 34]
Probab=81.65 E-value=0.52 Score=37.57 Aligned_cols=32 Identities=22% Similarity=0.166 Sum_probs=27.9
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
+|+|+|| |..|+.++..+...|.+|+++..++
T Consensus 2 ~V~IIGa-G~aGL~aA~~L~~~G~~V~vlE~~~ 33 (347)
T d2ivda1 2 NVAVVGG-GISGLAVAHHLRSRGTDAVLLESSA 33 (347)
T ss_dssp CEEEECC-BHHHHHHHHHHHTTTCCEEEECSSS
T ss_pred eEEEECC-CHHHHHHHHHHHhCCCCEEEEecCC
Confidence 4899997 9999999988888999999988653
|
| >d1oc2a_ c.2.1.2 (A:) dTDP-glucose 4,6-dehydratase (RmlB) {Streptococcus suis, serotype 2 [TaxId: 1307]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: Tyrosine-dependent oxidoreductases domain: dTDP-glucose 4,6-dehydratase (RmlB) species: Streptococcus suis, serotype 2 [TaxId: 1307]
Probab=81.37 E-value=0.5 Score=39.06 Aligned_cols=31 Identities=10% Similarity=0.083 Sum_probs=24.9
Q ss_pred CEEEEecCCcHHHHHHHHHHHHcCC--EEEEEe
Q 019332 154 ECVFISAASGAVGQLVGQFAKLLGC--YVVGSA 184 (342)
Q Consensus 154 ~~vlI~ga~g~vG~~ai~la~~~ga--~Vi~~~ 184 (342)
-+|||+||+|-+|...+..+...|. +|++.+
T Consensus 3 mkILVTGgtGfIGs~lv~~L~~~g~~v~v~~~d 35 (346)
T d1oc2a_ 3 KNIIVTGGAGFIGSNFVHYVYNNHPDVHVTVLD 35 (346)
T ss_dssp SEEEEETTTSHHHHHHHHHHHHHCTTCEEEEEE
T ss_pred CEEEEeCCCcHHHHHHHHHHHHCCCCeEEEEEe
Confidence 4799999999999998888877776 455544
|
| >d1lvla1 c.3.1.5 (A:1-150,A:266-335) Dihydrolipoamide dehydrogenase {Pseudomonas putida [TaxId: 303]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Pseudomonas putida [TaxId: 303]
Probab=81.26 E-value=0.66 Score=35.44 Aligned_cols=30 Identities=27% Similarity=0.265 Sum_probs=27.0
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
++|+|+ |+.|+.++..|..+|.+|.++...
T Consensus 8 lvVIG~-GpaGl~aA~~aa~~G~~V~liE~~ 37 (220)
T d1lvla1 8 LLIIGG-GPGGYVAAIRAGQLGIPTVLVEGQ 37 (220)
T ss_dssp EEEECC-SHHHHHHHHHHHHHTCCEEEECSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEecC
Confidence 788896 999999999999999999998754
|
| >d1v59a1 c.3.1.5 (A:1-160,A:283-355) Dihydrolipoamide dehydrogenase {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]
Probab=81.25 E-value=0.77 Score=35.17 Aligned_cols=31 Identities=23% Similarity=0.209 Sum_probs=26.9
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
|+|+|+ |+.|+.++..|...|.+|.++...+
T Consensus 8 viVIG~-GpAGl~aA~~aa~~G~kV~lie~~~ 38 (233)
T d1v59a1 8 VVIIGG-GPAGYVAAIKAAQLGFNTACVEKRG 38 (233)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCcEEEEEecC
Confidence 788997 9999998888888899999998654
|
| >d1ebda1 c.3.1.5 (A:7-154,A:272-346) Dihydrolipoamide dehydrogenase {Bacillus stearothermophilus [TaxId: 1422]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Bacillus stearothermophilus [TaxId: 1422]
Probab=81.24 E-value=0.78 Score=34.83 Aligned_cols=30 Identities=23% Similarity=0.185 Sum_probs=26.5
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCC
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGS 186 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s 186 (342)
|+|+|+ |+.|+.++..|...|.+|.++.+.
T Consensus 6 viVIG~-GpaGl~aA~~aar~G~kV~vIEk~ 35 (223)
T d1ebda1 6 TLVVGA-GPGGYVAAIRAAQLGQKVTIVEKG 35 (223)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESS
T ss_pred EEEECC-CHHHHHHHHHHHHCCCEEEEEecC
Confidence 778896 999999999999999999999754
|
| >d1p5ja_ c.79.1.1 (A:) L-serine dehydratase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: Tryptophan synthase beta subunit-like PLP-dependent enzymes superfamily: Tryptophan synthase beta subunit-like PLP-dependent enzymes family: Tryptophan synthase beta subunit-like PLP-dependent enzymes domain: L-serine dehydratase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.96 E-value=7.4 Score=31.15 Aligned_cols=45 Identities=22% Similarity=0.242 Sum_probs=32.8
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeC---ChhhHHHHHHHcCCC
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAG---SKDKIDLLKNKFGFD 200 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~---s~~~~~~~~~~~g~~ 200 (342)
.-+|...+|..|.+++..|+.+|.+++++.. +++|.+.++ .+|+.
T Consensus 55 ~~vv~aSsGN~g~a~A~~a~~~G~~~~i~~p~~~~~~k~~~~~-~~Ga~ 102 (319)
T d1p5ja_ 55 AHFVCSSAGNAGMAAAYAARQLGVPATIVVPGTTPALTIERLK-NEGAT 102 (319)
T ss_dssp CEEEECCSSHHHHHHHHHHHHHTCCEEEEECTTCCHHHHHHHH-HTTCE
T ss_pred CEEEEeCCCcHHHHHHHHhhhccccceeccccccccccccccc-cceec
Confidence 3456676899999999999999996655553 335667776 77774
|
| >d2cmda1 c.2.1.5 (A:1-145) Malate dehydrogenase {Escherichia coli [TaxId: 562]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: LDH N-terminal domain-like domain: Malate dehydrogenase species: Escherichia coli [TaxId: 562]
Probab=80.76 E-value=3.5 Score=29.07 Aligned_cols=69 Identities=17% Similarity=0.169 Sum_probs=39.8
Q ss_pred EEEEecCCcHHHHHHHHHH-HHcC--CEEEEEeCChhhHHHHHHHc-CC-----CeeEecCCchhHHHHHHHHCCCCccE
Q 019332 155 CVFISAASGAVGQLVGQFA-KLLG--CYVVGSAGSKDKIDLLKNKF-GF-----DEAFNYKEEPDLNEALKRYFPEGIDI 225 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la-~~~g--a~Vi~~~~s~~~~~~~~~~~-g~-----~~v~~~~~~~~~~~~i~~~~~~~~d~ 225 (342)
+|.|+|++|.+|...+.++ ...+ .++...+..+.....+. .+ .+ ...+...+ ++ +.++ +.|+
T Consensus 2 KV~IiGaaG~VG~~~a~~l~~~~~~~~el~L~D~~~~~~g~a~-Dl~h~~~~~~~~~~~~~~--~~-~~~~-----~aDv 72 (145)
T d2cmda1 2 KVAVLGAAGGIGQALALLLKTQLPSGSELSLYDIAPVTPGVAV-DLSHIPTAVKIKGFSGED--AT-PALE-----GADV 72 (145)
T ss_dssp EEEEETTTSHHHHHHHHHHHHHSCTTCEEEEECSSTTHHHHHH-HHHTSCSSCEEEEECSSC--CH-HHHT-----TCSE
T ss_pred EEEEEcCCChHHHHHHHHHHhCCCCCcEEEEecccccchhHHH-HHHCCccccCCcEEEcCC--Cc-cccC-----CCCE
Confidence 5889998899998777654 3434 37777776543323333 22 22 11222121 22 2332 4899
Q ss_pred EEeCCCh
Q 019332 226 YFENVGG 232 (342)
Q Consensus 226 vid~~g~ 232 (342)
|+-+.|.
T Consensus 73 vvitaG~ 79 (145)
T d2cmda1 73 VLISAGV 79 (145)
T ss_dssp EEECCSC
T ss_pred EEECCCc
Confidence 9999983
|
| >d1mv8a2 c.2.1.6 (A:1-202) GDP-mannose 6-dehydrogenase {Pseudomonas aeruginosa [TaxId: 287]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: 6-phosphogluconate dehydrogenase-like, N-terminal domain domain: GDP-mannose 6-dehydrogenase species: Pseudomonas aeruginosa [TaxId: 287]
Probab=80.69 E-value=1.4 Score=33.12 Aligned_cols=39 Identities=31% Similarity=0.358 Sum_probs=33.7
Q ss_pred EEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHH
Q 019332 155 CVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLK 194 (342)
Q Consensus 155 ~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~ 194 (342)
+|.|+|. |-+|+.++..+...|.+|++.+.++++.+.+.
T Consensus 2 kI~ViGl-G~vGl~~a~~la~~g~~V~g~D~n~~~i~~ln 40 (202)
T d1mv8a2 2 RISIFGL-GYVGAVCAGCLSARGHEVIGVDVSSTKIDLIN 40 (202)
T ss_dssp EEEEECC-STTHHHHHHHHHHTTCEEEEECSCHHHHHHHH
T ss_pred EEEEECC-CHhHHHHHHHHHhCCCcEEEEeCCHHHHHHhc
Confidence 5789996 99999888888788999999999988877775
|
| >d1zn7a1 c.61.1.1 (A:3-180) Adenine PRTase {Human (Homo sapiens) [TaxId: 9606]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: PRTase-like superfamily: PRTase-like family: Phosphoribosyltransferases (PRTases) domain: Adenine PRTase species: Human (Homo sapiens) [TaxId: 9606]
Probab=80.67 E-value=1.5 Score=32.33 Aligned_cols=36 Identities=17% Similarity=0.165 Sum_probs=30.8
Q ss_pred cCCCCCCEEEEec---CCcHHHHHHHHHHHHcCCEEEEE
Q 019332 148 CSPKQGECVFISA---ASGAVGQLVGQFAKLLGCYVVGS 183 (342)
Q Consensus 148 ~~~~~~~~vlI~g---a~g~vG~~ai~la~~~ga~Vi~~ 183 (342)
..+.+|++|||.. ++|+.-.+++++++..|++|+.+
T Consensus 113 ~~i~~g~rVlIVDDviaTGgT~~a~~~ll~~~Ga~vvg~ 151 (178)
T d1zn7a1 113 DALEPGQRVVVVDDLLATGGTMNAACELLGRLQAEVLEC 151 (178)
T ss_dssp TSSCTTCEEEEEEEEESSSHHHHHHHHHHHHTTCEEEEE
T ss_pred CcccCCCeEEEehhhhhhchHHHHHHHHHHHCCCEEEEE
Confidence 4578999999985 68999999999999999987643
|
| >d1ojta1 c.3.1.5 (A:117-275,A:401-470) Dihydrolipoamide dehydrogenase {Neisseria meningitidis [TaxId: 487]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: FAD/NAD(P)-binding domain superfamily: FAD/NAD(P)-binding domain family: FAD/NAD-linked reductases, N-terminal and central domains domain: Dihydrolipoamide dehydrogenase species: Neisseria meningitidis [TaxId: 487]
Probab=80.52 E-value=0.87 Score=34.99 Aligned_cols=31 Identities=23% Similarity=0.047 Sum_probs=27.4
Q ss_pred EEEecCCcHHHHHHHHHHHHcCCEEEEEeCCh
Q 019332 156 VFISAASGAVGQLVGQFAKLLGCYVVGSAGSK 187 (342)
Q Consensus 156 vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~ 187 (342)
|+|+|+ |+.|+.++..+...|.+|.++...+
T Consensus 9 viIIG~-GPaGlsaA~~aa~~G~~V~viE~~~ 39 (229)
T d1ojta1 9 VVVLGG-GPGGYSAAFAAADEGLKVAIVERYK 39 (229)
T ss_dssp EEEECC-SHHHHHHHHHHHHTTCCEEEEESSS
T ss_pred EEEECc-CHHHHHHHHHHHHCCCeEEEEeccC
Confidence 788897 9999999999999999999998654
|
| >d1oi7a1 c.2.1.8 (A:1-121) Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain {Thermus thermophilus [TaxId: 274]} | Back information, alignment and structure |
|---|
class: Alpha and beta proteins (a/b) fold: NAD(P)-binding Rossmann-fold domains superfamily: NAD(P)-binding Rossmann-fold domains family: CoA-binding domain domain: Succinyl-CoA synthetase, alpha-chain, N-terminal (CoA-binding) domain species: Thermus thermophilus [TaxId: 274]
Probab=80.04 E-value=6.7 Score=26.49 Aligned_cols=90 Identities=17% Similarity=0.157 Sum_probs=60.0
Q ss_pred CCCCCEEEEecCCcHHHHHHHHHHHHcCCEEEEEeCChhhHHHHHHHcCCCeeEecCCchhHHHHHHHHCCCCccEEEeC
Q 019332 150 PKQGECVFISAASGAVGQLVGQFAKLLGCYVVGSAGSKDKIDLLKNKFGFDEAFNYKEEPDLNEALKRYFPEGIDIYFEN 229 (342)
Q Consensus 150 ~~~~~~vlI~ga~g~vG~~ai~la~~~ga~Vi~~~~s~~~~~~~~~~~g~~~v~~~~~~~~~~~~i~~~~~~~~d~vid~ 229 (342)
+.++.+|+|.|.+|.-|..-.+.++.+|-+|++-+...+.-+.. .| -.++| ...+.+++ + ++|.-+-+
T Consensus 4 i~k~trVivQGiTG~~G~~ht~~m~~yGT~iVaGVtPgkgG~~~---~g-iPVf~-----tV~eAv~~-~--~~d~SvIf 71 (121)
T d1oi7a1 4 VNRETRVLVQGITGREGQFHTKQMLTYGTKIVAGVTPGKGGMEV---LG-VPVYD-----TVKEAVAH-H--EVDASIIF 71 (121)
T ss_dssp CCTTCEEEEETTTSHHHHHHHHHHHHHTCEEEEEECTTCTTCEE---TT-EEEES-----SHHHHHHH-S--CCSEEEEC
T ss_pred ecCCCcEEEEcCCCcHHHHHHHHHHHhCCceEeeeecCCCCcEE---EC-CchHh-----hHHHHHHh-c--CCeEEEEe
Confidence 45678999999999999999999999999988877443221111 11 13443 33444444 3 37777777
Q ss_pred CCh-hhHHHHHHhhhhCCEEEEE
Q 019332 230 VGG-KMLDAVLLNMKIHGRIAVC 251 (342)
Q Consensus 230 ~g~-~~~~~~~~~l~~~G~~v~~ 251 (342)
+.. ...+.+++++..+=+++.+
T Consensus 72 VPp~~a~dAi~EAi~agI~liv~ 94 (121)
T d1oi7a1 72 VPAPAAADAALEAAHAGIPLIVL 94 (121)
T ss_dssp CCHHHHHHHHHHHHHTTCSEEEE
T ss_pred eCHHHHHHHHHHHHhCCCcEEEE
Confidence 776 4566777888777666544
|