Citrus Sinensis ID: 019362

Local Sequence Feature Prediction

Prediction and (Method)Result
Residue Number Marker
Protein Sequence ?
Secondary Structure (PSIPRED) ?
Secondary Structure Prediction (SSPRO) ?
Coil and Loop (DISEMBL) ?
Flexible Loop (DISEMBL) ?
Low Complexity Region (SEG) ?
Disordered region (IsUnstruct) ?
Disordered Region (DISOPRED) ?
Disordered Region (DISEMBL) ?
Disordered Region (DISPRO) ?
Transmembrane Helix (TMHMM) ?
Transmembrane Helix (HMMTOP) ?
Transmembrane Helix (MEMSAT) ?
TM Helix, Signal Peptide (MEMSAT_SVM) ?
TM Helix, Signal Peptide (Phobius) ?
Signal Peptide (SignalP HMM Mode) ?
Signal Peptide (SignalP NN Mode) ?
Coiled Coils (COILS) ?
Positional Conservation ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQTPSAPVTPSTPKTPTTPSPKPTAAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT
cccccHHHHHHHHHHHHHHHHHHHHcccccccEEEccEEccccccccccccccccccccHHHHHHHHHHccccEEEccccccccccccccccccEEcccccccEEccccccccccHHHHHHHHHHHHHHHccccccEEEEEEEccccccccccccccHHHHHHHHHHHHHHHHHcccccccccccccEEEEEEcccccccccccccEEEEEEccccEEEEEcccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHccccccccccccccccccccccccHHHHHHHHHHHHcccccccccccccEEEEEccccccccccccccc
cccccccHHHHHHHHHHHHHHHHHHccccccEEEccHHHHHHHccccccHHHcEEcccHHHHHHHHHHHHcccEEEEccHHHHHHHccccccHHHHcccccccEEccccccEEccHHHHHHHHHHHHHHHcccccccEEEEEcccccccccccccccHHHHHHHHHHHHHHHHccccccccccccccEEEEccEccccccccHHHHHcccEcccccEccccEccccccccccccccccccccccccccccccEEEEEcccccHHHHHHHHHHHcccccccccccccccccccccHHHHHHHHHHHHHHHccccccccccccEEEEEEcccccccEEEccccc
MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVlaqsdppssgsfirqDTMRGILQFLkdhgspftinpypffayqsdprpetlafclfqpnagrvdsgtgikYMNMFDAQVDAVHSALNAMGFKDVEIVVAetgwpyrgdpnevgpsvenaKAYNGNLIAHLRsmagtplmpgksvdTYIFALYdedlkpgpafersfglfkpdlsaaydvgiskssqtpsapvtpstpktpttpspkptaagwcvpkagisdaQLQASLDYACsqgidcspiqpggacfepntvVSHAAFAMNLYYqtsaknpwncdfsktatltsqnpsyngcvypsggt
MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLaqsdppssgsFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISkssqtpsapvtpstpktpttpspkpTAAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTatltsqnpsyngcvypsggt
MISNDQNLISQllpamanmqnalnaaSLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQtpsapvtpstpktpttpspkptaaGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT
***************************LGGKIKVSTVHA***************IRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEV***VENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDV******************************AGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLT********C*******
*ISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLI****************VDTYIFALYDEDL****AFERSFGLFKPDLSAAYDVGISKSSQTP************************************QASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPS***
MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS***************************AGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT
****DQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISK************************TAAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYP****
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MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQTPSAPVTPSTPKTPTTPSPKPTAAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT
no confident homologs detected

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST ?

Original result of BLAST against SWISS-PROT Database

ID ?Alignment graph ?Length ? Definition ? RBH(Q2H) ? RBH(H2Q) ? Q cover ? H cover ? Identity ? E-value ?
Query342 2.2.26 [Sep-21-2011]
Q9M069504 Glucan endo-1,3-beta-gluc no no 0.953 0.646 0.732 1e-138
Q94G86460 Glucan endo-1,3-beta-D-gl N/A no 0.970 0.721 0.666 1e-132
P52409461 Glucan endo-1,3-beta-gluc N/A no 0.973 0.722 0.428 3e-78
Q9FJU9506 Glucan endo-1,3-beta-gluc no no 0.956 0.646 0.374 1e-66
Q8VYE5534 Glucan endo-1,3-beta-gluc no no 0.967 0.619 0.378 4e-66
Q9ZU91501 Glucan endo-1,3-beta-gluc no no 0.944 0.644 0.377 3e-62
O65399511 Glucan endo-1,3-beta-gluc no no 0.912 0.610 0.375 5e-60
Q8L868426 Glucan endo-1,3-beta-gluc no no 0.646 0.518 0.502 1e-57
Q9C7U5505 Glucan endo-1,3-beta-gluc no no 0.906 0.613 0.361 1e-54
Q9ZQG9392 Glucan endo-1,3-beta-gluc no no 0.646 0.563 0.461 4e-54
>sp|Q9M069|E137_ARATH Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana GN=At4g34480 PE=1 SV=2 Back     alignment and function desciption
 Score =  492 bits (1266), Expect = e-138,   Method: Compositional matrix adjust.
 Identities = 249/340 (73%), Positives = 280/340 (82%), Gaps = 14/340 (4%)

Query: 1   MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QD 58
           ++SND NL++QLLPAM N+Q AL A SLGGKIKVSTV++M+VL  SDPPSSGSF    Q 
Sbjct: 121 LMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQT 180

Query: 59  TMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFD 118
            ++GILQFL D GSPF INPYPFFAYQSDPRPETLAFCLF+PNAGRVDS TGIKY NMFD
Sbjct: 181 GLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFEPNAGRVDSKTGIKYTNMFD 240

Query: 119 AQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGT 178
           AQVDAVHSAL +MGF+ VEIVVAETGW  RGD NEVG SV+NAKAYNGNLIAHLRSM GT
Sbjct: 241 AQVDAVHSALKSMGFEKVEIVVAETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGT 300

Query: 179 PLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQTPSAPVTPST 238
           PLMPGK VDTYIFALYDE+LKPGP+ ER+FGLFK DLS  YDVG++KSS +         
Sbjct: 301 PLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSSSSQ------- 353

Query: 239 PKTPTTPSPKPTAAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSH 298
                TPS K T++GWCVPK G ++ +LQASLD+AC  GIDC  IQPGGACFEPN VVSH
Sbjct: 354 -----TPSGKVTSSGWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSH 408

Query: 299 AAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYP 338
           AA+AMN+Y+Q S K P +CDFSKTAT+TSQNPSYN CVYP
Sbjct: 409 AAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYP 448

Arabidopsis thaliana (taxid: 3702)
EC: 3EC: .EC: 2EC: .EC: 1EC: .EC: 3EC: 9
>sp|Q94G86|ALL9_OLEEU Glucan endo-1,3-beta-D-glucosidase OS=Olea europaea GN=OLE9 PE=1 SV=1 Back     alignment and function description
>sp|P52409|E13B_WHEAT Glucan endo-1,3-beta-glucosidase OS=Triticum aestivum GN=GLC1 PE=2 SV=1 Back     alignment and function description
>sp|Q9FJU9|E1313_ARATH Glucan endo-1,3-beta-glucosidase 13 OS=Arabidopsis thaliana GN=At5g56590 PE=1 SV=1 Back     alignment and function description
>sp|Q8VYE5|E1312_ARATH Glucan endo-1,3-beta-glucosidase 12 OS=Arabidopsis thaliana GN=At4g29360 PE=1 SV=1 Back     alignment and function description
>sp|Q9ZU91|E133_ARATH Glucan endo-1,3-beta-glucosidase 3 OS=Arabidopsis thaliana GN=At2g01630 PE=1 SV=2 Back     alignment and function description
>sp|O65399|E131_ARATH Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana GN=At1g11820 PE=1 SV=3 Back     alignment and function description
>sp|Q8L868|E1311_ARATH Glucan endo-1,3-beta-glucosidase 11 OS=Arabidopsis thaliana GN=At1g32860 PE=1 SV=1 Back     alignment and function description
>sp|Q9C7U5|E132_ARATH Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana GN=At1g66250 PE=1 SV=2 Back     alignment and function description
>sp|Q9ZQG9|E1314_ARATH Glucan endo-1,3-beta-glucosidase 14 OS=Arabidopsis thaliana GN=At2g27500 PE=1 SV=2 Back     alignment and function description

Close Homologs in the Non-Redundant Database Detected by BLAST ?

Original result of BLAST against Nonredundant Database

GI ?Alignment Graph ?Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query342
255536825 460 Glucan endo-1,3-beta-glucosidase precurs 0.982 0.730 0.813 1e-167
118487000 456 unknown [Populus trichocarpa] 0.976 0.732 0.812 1e-165
147812640 479 hypothetical protein VITISV_043447 [Viti 0.970 0.693 0.803 1e-161
118488033 452 unknown [Populus trichocarpa] 0.973 0.736 0.781 1e-160
359475310 490 PREDICTED: glucan endo-1,3-beta-glucosid 0.970 0.677 0.803 1e-159
225458301 465 PREDICTED: glucan endo-1,3-beta-glucosid 0.994 0.731 0.750 1e-153
356508404 459 PREDICTED: glucan endo-1,3-beta-glucosid 0.961 0.716 0.773 1e-153
255538616 461 Glucan endo-1,3-beta-glucosidase precurs 0.976 0.724 0.763 1e-153
357473221 464 Glucan endo-1,3-beta-glucosidase [Medica 0.985 0.726 0.748 1e-149
356517072 459 PREDICTED: glucan endo-1,3-beta-glucosid 0.959 0.714 0.755 1e-148
>gi|255536825|ref|XP_002509479.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223549378|gb|EEF50866.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
 Score =  592 bits (1527), Expect = e-167,   Method: Compositional matrix adjust.
 Identities = 280/344 (81%), Positives = 311/344 (90%), Gaps = 8/344 (2%)

Query: 1   MISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSF--IRQD 58
           ++S DQNLISQLLPAM N+ NALNAASLGGKIKVSTVH+M+VL+QSDPPSSG F    QD
Sbjct: 123 VLSGDQNLISQLLPAMQNIANALNAASLGGKIKVSTVHSMAVLSQSDPPSSGLFNPSYQD 182

Query: 59  TMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFD 118
           TM+G+LQF +D+GSP TINPYPFFAYQSDPRPETLAFCLFQPN+GR+DSG GIKYMNMFD
Sbjct: 183 TMKGLLQFQRDNGSPLTINPYPFFAYQSDPRPETLAFCLFQPNSGRIDSGNGIKYMNMFD 242

Query: 119 AQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGT 178
           AQVDAV SALN +GFKD+EI+VAETGWPYRGD NEVGPSVENA+AYNGNLIAHLRS+ GT
Sbjct: 243 AQVDAVRSALNGIGFKDIEILVAETGWPYRGDSNEVGPSVENARAYNGNLIAHLRSLVGT 302

Query: 179 PLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQTPSAPVTPST 238
           PLMPGKSVDTY+FALYDEDLKPGP+ ER+FGLFK DLS AYD G+SK+S      VTPS+
Sbjct: 303 PLMPGKSVDTYLFALYDEDLKPGPSSERAFGLFKTDLSMAYDAGLSKAS------VTPSS 356

Query: 239 PKTPTTPSPKPTAAGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSH 298
           PKTP TPS KPT AGWC+PK+G+ DAQLQASLDYAC QGIDCSPIQPGGACFEPNT+ SH
Sbjct: 357 PKTPATPSTKPTGAGWCMPKSGVPDAQLQASLDYACGQGIDCSPIQPGGACFEPNTLASH 416

Query: 299 AAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGGT 342
           AA+AMNLYYQTS+KNPWNCDFS+TATLTS+NPSYNGCVYP G T
Sbjct: 417 AAYAMNLYYQTSSKNPWNCDFSQTATLTSKNPSYNGCVYPGGST 460

Source: Ricinus communis

Species: Ricinus communis

Genus: Ricinus

Family: Euphorbiaceae

Order: Malpighiales

Class:

Phylum: Streptophyta

Superkingdom: Eukaryota
>gi|118487000|gb|ABK95331.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|147812640|emb|CAN61862.1| hypothetical protein VITISV_043447 [Vitis vinifera] Back     alignment and taxonomy information
>gi|118488033|gb|ABK95837.1| unknown [Populus trichocarpa] Back     alignment and taxonomy information
>gi|359475310|ref|XP_003631648.1| PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Vitis vinifera] gi|297741451|emb|CBI32582.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|225458301|ref|XP_002282736.1| PREDICTED: glucan endo-1,3-beta-glucosidase 7 [Vitis vinifera] gi|302142484|emb|CBI19687.3| unnamed protein product [Vitis vinifera] Back     alignment and taxonomy information
>gi|356508404|ref|XP_003522947.1| PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Glycine max] Back     alignment and taxonomy information
>gi|255538616|ref|XP_002510373.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] gi|223551074|gb|EEF52560.1| Glucan endo-1,3-beta-glucosidase precursor, putative [Ricinus communis] Back     alignment and taxonomy information
>gi|357473221|ref|XP_003606895.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] gi|355507950|gb|AES89092.1| Glucan endo-1,3-beta-glucosidase [Medicago truncatula] Back     alignment and taxonomy information
>gi|356517072|ref|XP_003527214.1| PREDICTED: glucan endo-1,3-beta-glucosidase 7-like [Glycine max] Back     alignment and taxonomy information

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST ?

Original result of BLAST against Gene Ontology (AMIGO)

ID ? Alignment graph ? Length ? Definition ? Q cover ? H cover ? Identity ? E-value ?
Query342
TAIR|locus:2139519504 AT4G34480 [Arabidopsis thalian 0.961 0.652 0.688 4.9e-124
TAIR|locus:2042604503 AT2G16230 [Arabidopsis thalian 0.970 0.660 0.664 4.4e-123
TAIR|locus:2165432438 AT5G42720 [Arabidopsis thalian 0.652 0.509 0.641 1.1e-76
TAIR|locus:1009023441458 AT5G24318 [Arabidopsis thalian 0.883 0.659 0.449 7.5e-73
TAIR|locus:2116327455 AT4G26830 [Arabidopsis thalian 0.883 0.663 0.415 2e-65
TAIR|locus:2056519472 AT2G05790 [Arabidopsis thalian 0.918 0.665 0.403 2.9e-64
TAIR|locus:2161710465 AT5G55180 [Arabidopsis thalian 0.877 0.645 0.411 4.8e-62
TAIR|locus:2039742 549 AT2G39640 [Arabidopsis thalian 0.675 0.420 0.426 1.8e-48
TAIR|locus:2118339534 AT4G29360 [Arabidopsis thalian 0.906 0.580 0.375 1.2e-60
TAIR|locus:2164991506 AT5G56590 [Arabidopsis thalian 0.894 0.604 0.374 1.9e-60
TAIR|locus:2139519 AT4G34480 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
 Score = 1219 (434.2 bits), Expect = 4.9e-124, P = 4.9e-124
 Identities = 236/343 (68%), Positives = 263/343 (76%)

Query:     1 MISNDQNLISQXXXXXXXXXXXXXXXSLGGKIKVSTVHAMSVLAQSDPPSSGSFIR--QD 58
             ++SND NL++Q               SLGGKIKVSTV++M+VL  SDPPSSGSF    Q 
Sbjct:   121 LMSNDPNLVNQLLPAMQNVQKALEAVSLGGKIKVSTVNSMTVLGSSDPPSSGSFAAGYQT 180

Query:    59 TMRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFD 118
              ++GILQFL D GSPF INPYPFFAYQSDPRPETLAFCLF+PNAGRVDS TGIKY NMFD
Sbjct:   181 GLKGILQFLSDTGSPFAINPYPFFAYQSDPRPETLAFCLFEPNAGRVDSKTGIKYTNMFD 240

Query:   119 AQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGT 178
             AQVDAVHSAL +MGF+ VEIVVAETGW  RGD NEVG SV+NAKAYNGNLIAHLRSM GT
Sbjct:   241 AQVDAVHSALKSMGFEKVEIVVAETGWASRGDANEVGASVDNAKAYNGNLIAHLRSMVGT 300

Query:   179 PLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGISKSSQXXXXXXXXXX 238
             PLMPGK VDTYIFALYDE+LKPGP+ ER+FGLFK DLS  YDVG++KSS           
Sbjct:   301 PLMPGKPVDTYIFALYDENLKPGPSSERAFGLFKTDLSMVYDVGLAKSSSSSQTPSGKVT 360

Query:   239 XXXXXXXXXXXXXXGWCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSH 298
                           GWCVPK G ++ +LQASLD+AC  GIDC  IQPGGACFEPN VVSH
Sbjct:   361 SS------------GWCVPKKGATNEELQASLDWACGHGIDCGAIQPGGACFEPNNVVSH 408

Query:   299 AAFAMNLYYQTSAKNPWNCDFSKTATLTSQNPSYNGCVYPSGG 341
             AA+AMN+Y+Q S K P +CDFSKTAT+TSQNPSYN CVYP GG
Sbjct:   409 AAYAMNMYFQKSPKQPTDCDFSKTATVTSQNPSYNNCVYPGGG 451
GO:0003824 "catalytic activity" evidence=IEA
GO:0004553 "hydrolase activity, hydrolyzing O-glycosyl compounds" evidence=IEA;ISS
GO:0005975 "carbohydrate metabolic process" evidence=IEA
GO:0009507 "chloroplast" evidence=ISM
GO:0043169 "cation binding" evidence=IEA
TAIR|locus:2042604 AT2G16230 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2165432 AT5G42720 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:1009023441 AT5G24318 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2116327 AT4G26830 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2056519 AT2G05790 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2161710 AT5G55180 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2039742 AT2G39640 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2118339 AT4G29360 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms
TAIR|locus:2164991 AT5G56590 [Arabidopsis thaliana (taxid:3702)] Back     alignment and assigned GO terms

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries ?

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by Ezypred Server ?

Original result from Ezypred Server

Fail to connect to Ezypred Server

EC Number Prediction by EFICAz Software ?

Prediction LevelEC numberConfidence of Prediction
3rd Layer3.2.1.390.914
3rd Layer3.2.10.921

Prediction of Functionally Associated Proteins

Functionally Associated Proteins Detected by STRING ?

Original result from the STRING server

Your Input:
GSVIVG00014622001
SubName- Full=Chromosome chr18 scaffold_1, whole genome shotgun sequence; (343 aa)
(Vitis vinifera)
Predicted Functional Partners:
 
Sorry, there are no predicted associations at the current settings.
 

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against CDD database part I

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query342
pfam00332310 pfam00332, Glyco_hydro_17, Glycosyl hydrolases fam 5e-66
smart0076885 smart00768, X8, Possibly involved in carbohydrate 4e-42
pfam0798377 pfam07983, X8, X8 domain 8e-24
COG5309305 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohyd 1e-05
>gnl|CDD|215863 pfam00332, Glyco_hydro_17, Glycosyl hydrolases family 17 Back     alignment and domain information 
 Score =  210 bits (536), Expect = 5e-66
 Identities = 102/215 (47%), Positives = 136/215 (63%), Gaps = 11/215 (5%)

Query: 10  SQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDT---MRGILQF 66
           S L+PAM N++NAL AA LG KIKVST     +L  S PPS GSF R +T   M  I+ F
Sbjct: 102 SFLVPAMRNIRNALTAAGLGNKIKVSTSVRFDILGNSFPPSYGSF-RVETRSFMDPIIVF 160

Query: 67  LKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHS 126
           L    +P   N YP+FAY ++PR  +L + LFQP    VD G G  Y N+FDA VDAV++
Sbjct: 161 LAGTNAPLLANVYPYFAYSNNPRDISLNYALFQPGTTVVDGGLG--YQNLFDAMVDAVYA 218

Query: 127 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSV 186
           AL   G   VE+VV+E+GWP  G       ++ENA+ YN NLI H++   GTP  PG ++
Sbjct: 219 ALEKAGGPSVEVVVSESGWPSDGGF---AATIENARTYNQNLINHVK--KGTPKRPGWAI 273

Query: 187 DTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDV 221
           +TY+FA++DE+ KPG + E+ FGLF P+    Y +
Sbjct: 274 ETYVFAMFDENQKPGESVEKHFGLFYPNKQPKYPI 308

Length = 310
>gnl|CDD|197867 smart00768, X8, Possibly involved in carbohydrate binding Back     alignment and domain information
>gnl|CDD|219681 pfam07983, X8, X8 domain Back     alignment and domain information
>gnl|CDD|227625 COG5309, COG5309, Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information

Conserved Domains Detected by HHsearch ?

Original result of HHsearch against CDD database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query 342
PF00332310 Glyco_hydro_17: Glycosyl hydrolases family 17; Int 100.0
smart0076885 X8 Possibly involved in carbohydrate binding. The 99.96
COG5309305 Exo-beta-1,3-glucanase [Carbohydrate transport and 99.95
PF0798378 X8: X8 domain; InterPro: IPR012946 The X8 domain [ 99.88
PF07745332 Glyco_hydro_53: Glycosyl hydrolase family 53; Inte 97.64
PF11790239 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; 95.5
COG3867403 Arabinogalactan endo-1,4-beta-galactosidase [Carbo 95.34
smart00633254 Glyco_10 Glycosyl hydrolase family 10. 94.66
PF00150281 Cellulase: Cellulase (glycosyl hydrolase family 5) 88.0
PF00232455 Glyco_hydro_1: Glycosyl hydrolase family 1; InterP 85.18
PRK10150604 beta-D-glucuronidase; Provisional 84.63
TIGR03356427 BGL beta-galactosidase. 81.81
PRK13511469 6-phospho-beta-galactosidase; Provisional 80.81
>PF00332 Glyco_hydro_17: Glycosyl hydrolases family 17; InterPro: IPR000490 O-Glycosyl hydrolases 3 Back     alignment and domain information 
Probab=100.00  E-value=1.4e-63  Score=481.65  Aligned_cols=206  Identities=53%  Similarity=0.951  Sum_probs=170.3

Q ss_pred             HHHHHHHHHHHHHHHCCCCCCcEEEeccccccccCCCCCCCcccCCc--hhHHHHHHHHHhcCCccEEecCCCCccCCCC
Q 019362           11 QLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQSDP   88 (342)
Q Consensus        11 ~Lvpam~ni~~aL~~~gl~~~ikVst~~~~~~l~~s~pPS~g~F~~~--~~~~~~l~fL~~~~sp~~vNiyPyf~~~~~~   88 (342)
                      .|||||+|||++|+++||+++|||+|++++++|.++||||+|+|+.+  ++|+++++||.++++|||+|+||||+|..+|
T Consensus       103 ~lvpAm~ni~~aL~~~~L~~~IkVst~~~~~vl~~s~PPS~g~F~~~~~~~~~~~l~fL~~t~spf~vN~yPyfa~~~~~  182 (310)
T PF00332_consen  103 YLVPAMQNIHNALTAAGLSDQIKVSTPHSMDVLSNSFPPSAGVFRSDIASVMDPLLKFLDGTNSPFMVNVYPYFAYQNNP  182 (310)
T ss_dssp             GHHHHHHHHHHHHHHTT-TTTSEEEEEEEGGGEEE-SSGGG-EESHHHHHHHHHHHHHHHHHT--EEEE--HHHHHHHST
T ss_pred             eeccHHHHHHHHHHhcCcCCcceeccccccccccccCCCccCcccccchhhhhHHHHHhhccCCCceeccchhhhccCCc
Confidence            79999999999999999998999999999999999999999999999  8999999999999999999999999999999


Q ss_pred             CCcCcceeccCCCCccccCCCCccchhhHHHHHHHHHHHHHHhCCCCceEEEeeecCCCCCCCCCCCCCHHHHHHHHHHH
Q 019362           89 RPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNL  168 (342)
Q Consensus        89 ~~i~l~yalf~~~~~~~d~~~~~~Y~n~fda~~Dav~~A~~k~g~~~~~vvVtETGWPs~G~~~~~~as~~Na~~y~~~l  168 (342)
                      ..++|+||||+++.+++|+  +++|+||||+|+|++++||+|+|+++++|||+||||||+|+.   .|+++||+.|++++
T Consensus       183 ~~~~l~yAlf~~~~~~~D~--~~~y~nlfDa~~da~~~a~~~~g~~~~~vvv~ETGWPs~G~~---~a~~~nA~~~~~nl  257 (310)
T PF00332_consen  183 QNISLDYALFQPNSGVVDG--GLAYTNLFDAMVDAVYAAMEKLGFPNVPVVVGETGWPSAGDP---GATPENAQAYNQNL  257 (310)
T ss_dssp             TTS-HHHHTT-SSS-SEET--TEEESSHHHHHHHHHHHHHHTTT-TT--EEEEEE---SSSST---TCSHHHHHHHHHHH
T ss_pred             ccCCccccccccccccccc--chhhhHHHHHHHHHHHHHHHHhCCCCceeEEeccccccCCCC---CCCcchhHHHHHHH
Confidence            9999999999998777754  899999999999999999999999999999999999999994   59999999999999


Q ss_pred             HHHHhhcCCCCCCCCCcccEEEEEeecCCCCCCCccCcceeeecCCCCeeeeeec
Q 019362          169 IAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGI  223 (342)
Q Consensus       169 v~~~~~~~Gtp~rp~~~~~~y~F~lfDe~~K~g~~~E~~wGlf~~d~~~ky~l~~  223 (342)
                      ++++.  .|||+||+..+++||||||||+||++..+|||||||++||++||+|+|
T Consensus       258 ~~~~~--~gt~~~~~~~~~~y~F~~FdE~~K~~~~~E~~wGlf~~d~~~ky~~~f  310 (310)
T PF00332_consen  258 IKHVL--KGTPLRPGNGIDVYIFEAFDENWKPGPEVERHWGLFYPDGTPKYDLDF  310 (310)
T ss_dssp             HHHCC--GBBSSSBSS---EEES-SB--TTSSSSGGGGG--SB-TTSSBSS----
T ss_pred             HHHHh--CCCcccCCCCCeEEEEEEecCcCCCCCcccceeeeECCCCCeecCCCC
Confidence            99997  799999999999999999999999987799999999999999999986

2.1. from EC are a widespread group of enzymes that hydrolyse the glycosidic bond between two or more carbohydrates, or between a carbohydrate and a non-carbohydrate moiety. A classification system for glycosyl hydrolases, based on sequence similarity, has led to the definition of 85 different families [, ]. This classification is available on the CAZy (CArbohydrate-Active EnZymes) web site. Glycoside hydrolase family 17 GH17 from CAZY comprises enzymes with several known activities; endo-1,3-beta-glucosidase (3.2.1.39 from EC); lichenase (3.2.1.73 from EC); exo-1,3-glucanase (3.2.1.58 from EC). Currently these enzymes have only been found in plants and in fungi. ; GO: 0004553 hydrolase activity, hydrolyzing O-glycosyl compounds, 0005975 carbohydrate metabolic process; PDB: 1AQ0_B 1GHR_A 1GHS_B 2CYG_A 3UR8_A 3UR7_B 3EM5_C 3F55_D.
>smart00768 X8 Possibly involved in carbohydrate binding Back     alignment and domain information
>COG5309 Exo-beta-1,3-glucanase [Carbohydrate transport and metabolism] Back     alignment and domain information
>PF07983 X8: X8 domain; InterPro: IPR012946 The X8 domain [] contains 6 conserved cysteine residues that presumably form three disulphide bridges Back     alignment and domain information
>PF07745 Glyco_hydro_53: Glycosyl hydrolase family 53; InterPro: IPR011683 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF11790 Glyco_hydro_cc: Glycosyl hydrolase catalytic core; InterPro: IPR024655 This entry represents the glycosyl hydrolase catalytic core of a group of uncharacterised proteins Back     alignment and domain information
>COG3867 Arabinogalactan endo-1,4-beta-galactosidase [Carbohydrate transport and metabolism] Back     alignment and domain information
>smart00633 Glyco_10 Glycosyl hydrolase family 10 Back     alignment and domain information
>PF00150 Cellulase: Cellulase (glycosyl hydrolase family 5); InterPro: IPR001547 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PF00232 Glyco_hydro_1: Glycosyl hydrolase family 1; InterPro: IPR001360 O-Glycosyl hydrolases 3 Back     alignment and domain information
>PRK10150 beta-D-glucuronidase; Provisional Back     alignment and domain information
>TIGR03356 BGL beta-galactosidase Back     alignment and domain information
>PRK13511 6-phospho-beta-galactosidase; Provisional Back     alignment and domain information

Homologous Structure Templates

Structure Templates Detected by BLAST ?

Original result of BLAST against Protein Data Bank

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query342
2jon_A101 Solution Structure Of The C-Terminal Domain Ole E 9 3e-34
1ghs_A306 The Three-Dimensional Structures Of Two Plant Beta- 4e-34
3ur7_A323 Higher-density Crystal Structure Of Potato Endo-1,3 1e-32
4gzi_A323 Active-site Mutant Of Potato Endo-1,3-beta-glucanas 6e-32
2cyg_A312 Crystal Structure At 1.45- Resolution Of The Major 3e-30
3em5_A316 Crystal Structure Of A Native Endo Beta-1,3-Glucana 5e-30
1aq0_A306 Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space G 5e-26
>pdb|2JON|A Chain A, Solution Structure Of The C-Terminal Domain Ole E 9 Length = 101 Back     alignment and structure 
Iteration: 1

 Score =  142 bits (358), Expect = 3e-34,   Method: Compositional matrix adjust.
 Identities = 62/87 (71%), Positives = 73/87 (83%)
Query: 254 WCVPKAGISDAQLQASLDYACSQGIDCSPIQPGGACFEPNTVVSHAAFAMNLYYQTSAKN 313
           WCVPK G+SD QL  +++YACSQGIDC PIQPGGACFEPNTV +HAA+ MNLYYQ + +N
Sbjct: 13  WCVPKPGVSDDQLTGNINYACSQGIDCGPIQPGGACFEPNTVKAHAAYVMNLYYQHAGRN 72
Query: 314 PWNCDFSKTATLTSQNPSYNGCVYPSG 340
            WNCDFS+TATLT+ NPSY  C +PSG
Sbjct: 73  SWNCDFSQTATLTNTNPSYGACNFPSG 99
>pdb|1GHS|A Chain A, The Three-Dimensional Structures Of Two Plant Beta-Glucan Endohydrolases With Distinct Substrate Specificities Length = 306 Back     alignment and structure
>pdb|3UR7|A Chain A, Higher-density Crystal Structure Of Potato Endo-1,3-beta-glucanase Length = 323 Back     alignment and structure
>pdb|4GZI|A Chain A, Active-site Mutant Of Potato Endo-1,3-beta-glucanase In Complex With Laminaratriose Length = 323 Back     alignment and structure
>pdb|2CYG|A Chain A, Crystal Structure At 1.45- Resolution Of The Major Allergen Endo-Beta-1,3-Glucanase Of Banana As A Molecular Basis For The Latex-Fruit Syndrome Length = 312 Back     alignment and structure
>pdb|3EM5|A Chain A, Crystal Structure Of A Native Endo Beta-1,3-Glucanase (Hev B 2), A Major Allergen From Hevea Brasiliensis Length = 316 Back     alignment and structure
>pdb|1AQ0|A Chain A, Barley 1,3-1,4-Beta-Glucanase In Monoclinic Space Group Length = 306 Back     alignment and structure

Structure Templates Detected by RPS-BLAST ?

Original result of RPS-BLAST against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query342
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 2e-66
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 9e-66
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 1e-65
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 4e-63
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 2e-61
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 3e-42
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 5e-15
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Length = 306 Back     alignment and structure
 Score =  210 bits (536), Expect = 2e-66
 Identities = 89/216 (41%), Positives = 124/216 (57%), Gaps = 8/216 (3%)

Query: 7   NLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQDTMRGILQF 66
                +LPAM N+  AL+AA LG  IKVST      +A S PPS+G F +   M  + + 
Sbjct: 98  GATQSILPAMRNLNAALSAAGLG-AIKVSTSIRFDEVANSFPPSAGVF-KNAYMTDVARL 155

Query: 67  LKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHS 126
           L   G+P   N YP+FAY+ +P   +L +  FQP     D   G+ Y ++FDA VDAV++
Sbjct: 156 LASTGAPLLANVYPYFAYRDNPGSISLNYATFQPGTTVRDQNNGLTYTSLFDAMVDAVYA 215

Query: 127 ALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTPLMPGKSV 186
           AL   G   V++VV+E+GWP  G       S  NA+ YN  LI H   + G      +++
Sbjct: 216 ALEKAGAPAVKVVVSESGWPSAGGF---AASAGNARTYNQGLINH---VGGGTPKKREAL 269

Query: 187 DTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVG 222
           +TYIFA+++E+ K G A ERSFGLF PD S AY++ 
Sbjct: 270 ETYIFAMFNENQKTGDATERSFGLFNPDKSPAYNIQ 305
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Length = 323 Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Length = 312 Back     alignment and structure
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} PDB: 3f55_A* Length = 316 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Length = 306 Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Length = 101 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Length = 555 Back     alignment and structure

Structure Templates Detected by HHsearch ?

Original result of HHsearch against PDB70 database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query342
3em5_A316 Beta-1,3-glucanase; glycoprotein, rossmann fold, ( 100.0
3ur8_A323 Glucan endo-1,3-beta-D-glucosidase; glucoside hydr 100.0
2cyg_A312 Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (be 100.0
1aq0_A306 1,3-1,4-beta-glucanase; hydrolase, glycosidase, gl 100.0
1ghs_A306 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulg 100.0
2w61_A555 GAS2P, glycolipid-anchored surface protein 2; glyc 100.0
2jon_A101 Beta-1,3-glucanase; olive pollen, allergen; NMR {O 100.0
1fob_A334 Beta-1,4-galactanase; B/A barrel, glycosyl hydrola 98.84
1hjs_A332 Beta-1,4-galactanase; 4-galactanases, family 53 gl 98.75
1ur4_A399 Galactanase; hydrolase, beta-1, glycoside hydrolas 98.21
4ekj_A500 Beta-xylosidase; TIM-barrel fold, hemicellulase, h 97.7
1uhv_A500 Beta-xylosidase; family 39 glycoside hydrolase, xy 96.86
1w91_A503 Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 96.7
3civ_A343 Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1. 96.43
1n82_A331 Xylanase, intra-cellular xylanase; hydrolase; 1.45 94.76
3cui_A315 EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine 94.65
1nq6_A302 XYS1; glycoside hydrolase family 10, xylanase, xyl 94.48
3hn3_A613 Beta-G1, beta-glucuronidase; lysosomal enzyme, aci 93.85
3lpf_A605 Beta-glucuronidase; alpha/beta barrel, sugar-bindi 92.49
3icg_A515 Endoglucanase D; cellulase, xylanase, carbohydrate 92.28
1xyz_A347 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrola 92.27
1ur1_A378 Endoxylanase; hydrolase, family 10, glycoside hydr 91.7
1v0l_A313 Endo-1,4-beta-xylanase A; glycoside hydrolase fami 91.01
1i1w_A303 Endo-1,4-beta-xylanase; xylan degradation, hydrola 90.95
2dep_A356 Xylanase B, thermostable celloxylanase; glycosidas 88.62
1ta3_B303 Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), 88.58
1r85_A379 Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A 87.56
1ceo_A343 Cellulase CELC; glycosyl hydrolase, family A/5 of 87.01
2jep_A395 Xyloglucanase; family 5, plant cell WALL, hydrolas 86.23
3aof_A317 Endoglucanase; glycosyl hydrolase family 5, cellul 85.85
3u7b_A327 Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET 85.62
3niy_A341 Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.5 85.11
2d1z_A436 Endo-1,4-beta-D-xylanase; TIM-barrel, retaining en 84.86
3ndz_A345 Endoglucanase D; cellotriose, xylanase, carbohydra 84.74
2uwf_A356 Endoxylanase, alkaline active endoxylanase; hydrol 83.95
3cmg_A667 Putative beta-galactosidase; structural genomics, 83.88
4awe_A387 Endo-beta-D-1,4-mannanase; hydrolase, endo-mannana 83.74
1edg_A380 Endoglucanase A; family A, cellulases, xylanases, 82.78
1w32_A348 Endo-1,4-beta-xylanase A precursor; mutant, calciu 82.62
2osx_A481 Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel 81.69
3fj0_A465 Beta-glucosidase; BGLB,BGL, hydrolase, glycosidase 81.18
3ta9_A458 Glycoside hydrolase family 1; TIM barrel, glucosid 80.83
1us2_A530 Xylanase10C, endo-beta-1,4-xylanase; hydrolase, ca 80.24
1gnx_A479 Beta-glucosidase; hydrolase, glycosyltransferase, 80.21
>3em5_A Beta-1,3-glucanase; glycoprotein, rossmann fold, (beta-alpha)8-TIM-barrel, glyco hydrolase, allergen; HET: NAG FUC MAN; 2.50A {Hevea brasiliensis} SCOP: c.1.8.3 PDB: 3f55_A* Back     alignment and structure
Probab=100.00  E-value=5.7e-71  Score=531.82  Aligned_cols=209  Identities=38%  Similarity=0.685  Sum_probs=201.1

Q ss_pred             HhHHHHHHHHHHHHHHHCCCCCCcEEEeccccccccCCCCCCCcccCCc--hhHHHHHHHHHhcCCccEEecCCCCccCC
Q 019362            9 ISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQS   86 (342)
Q Consensus         9 ~~~Lvpam~ni~~aL~~~gl~~~ikVst~~~~~~l~~s~pPS~g~F~~~--~~~~~~l~fL~~~~sp~~vNiyPyf~~~~   86 (342)
                      ++.|+|||+|||+||+++||+++|||||++++++|.++||||+|+||++  ++|+|||+||++++||||||+||||+|..
T Consensus       106 ~~~LvpAm~nv~~AL~~aGL~~~IkVsT~~s~~vl~~s~pPS~g~F~~~~~~~~~pil~fL~~~~sp~~vN~YPyf~~~~  185 (316)
T 3em5_A          106 AQFVLPAMRNIHDAIRSAGLQDQIKVSTAIDLTLVGNSYPPSAGAFRDDVRSYLNPIIRFLSSIRSPLLANIYPYFTYAG  185 (316)
T ss_dssp             HHHHHHHHHHHHHHHHHTTCTTTSEEEEEECTTSEEECSSGGGCEECGGGHHHHHHHHHHHHHTTCCEEEECCHHHHHHH
T ss_pred             HHHHHHHHHHHHHHHHHCCCCCceEEEecccccccccCCCCCCceechhHHHHHHHHHHHHHhcCCeeEeecchhhhccC
Confidence            7899999999999999999998899999999999999999999999999  89999999999999999999999999999


Q ss_pred             CCCCcCcceeccCCCCccccCCCCccchhhHHHHHHHHHHHHHHhCCCCceEEEeeecCCCCCCCCCCCCCHHHHHHHHH
Q 019362           87 DPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNG  166 (342)
Q Consensus        87 ~~~~i~l~yalf~~~~~~~d~~~~~~Y~n~fda~~Dav~~A~~k~g~~~~~vvVtETGWPs~G~~~~~~as~~Na~~y~~  166 (342)
                      ++++|+|+||||++ .+++|++++++|+||||||+|++++||+|+|+++++|||+||||||+|+.   +||++||++|++
T Consensus       186 ~~~~i~l~yAlf~~-~~~~~~~~~~~Y~nlfDa~~Da~~~Al~~~g~~~~~v~V~EtGWPs~G~~---~as~~na~~y~~  261 (316)
T 3em5_A          186 NPRDISLPYALFTS-PSVVVWDGQRGYKNLFDATLDALYSALERASGGSLEVVVSESGWPSAGAF---AATFDNGRTYLS  261 (316)
T ss_dssp             CTTTSCHHHHTTCC-SSCSEEETTEEECSHHHHHHHHHHHHHHHTTCTTCCEEEEEECCCSSSST---TCCHHHHHHHHH
T ss_pred             CCCCcCchhhcccC-CCcccCCCCccHHHHHHHHHHHHHHHHHHcCCCCCceEeccccCCCCCCC---CCCHHHHHHHHH
Confidence            99999999999998 67889999999999999999999999999999999999999999999974   799999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCcccEEEEEeecCCCCCCCccCcceeeecCCCCeeeeeecc
Q 019362          167 NLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGIS  224 (342)
Q Consensus       167 ~lv~~~~~~~Gtp~rp~~~~~~y~F~lfDe~~K~g~~~E~~wGlf~~d~~~ky~l~~~  224 (342)
                      +++||+  +.|||+||+..+++|||+||||+||+ ++.|+|||||++|++|||+|+|+
T Consensus       262 ~li~~~--~~GTP~rp~~~~~~y~F~lfDe~~K~-~~~E~~~Glf~~d~~~ky~l~~~  316 (316)
T 3em5_A          262 NLIQHV--KRGTPKRPKRAIETYLFAMFDENKKQ-PEVEKHFGLFFPNKWQKYNLNFS  316 (316)
T ss_dssp             HHHHHT--TSCCSSSCSSCCCEEESCSBCCTTCS-SGGGGCCCSBCTTSCBSSCCCCC
T ss_pred             HHHHhc--cCCCCCCCCCCceEEEEEeecCCCCC-CCCCceeeEECCCCCEeecCCCC
Confidence            999998  47999999989999999999999998 48999999999999999999873
>3ur8_A Glucan endo-1,3-beta-D-glucosidase; glucoside hydrolase, GH17 family, pathogenesis-related class protein (PR-2), TIM barrel; 1.26A {Solanum tuberosum} PDB: 3ur7_A Back     alignment and structure
>2cyg_A Beta-1, 3-glucananse; endo-beta-1,3-glucanase, (beta-alpha)8-TIM-barrel, B-cell epitopes, allergen, banana, hydrolase; 1.45A {Musa acuminata} SCOP: c.1.8.3 Back     alignment and structure
>1aq0_A 1,3-1,4-beta-glucanase; hydrolase, glycosidase, glycoprotein, glycosylated protein; HET: NAG; 2.00A {Hordeum vulgare} SCOP: c.1.8.3 PDB: 1ghr_A Back     alignment and structure
>1ghs_A 1,3-beta-glucanase; hydrolase; 2.30A {Hordeum vulgare} SCOP: c.1.8.3 Back     alignment and structure
>2w61_A GAS2P, glycolipid-anchored surface protein 2; glycoprotein, cell membrane, fungal cell WALL, transglycosyl glucan, membrane, GPI-anchor; 1.62A {Saccharomyces cerevisiae} PDB: 2w62_A* 2w63_A* Back     alignment and structure
>2jon_A Beta-1,3-glucanase; olive pollen, allergen; NMR {Olea europaea} Back     alignment and structure
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A Back     alignment and structure
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A* Back     alignment and structure
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A* Back     alignment and structure
>4ekj_A Beta-xylosidase; TIM-barrel fold, hemicellulase, hydrolase; 2.50A {Caulobacter vibrioides} Back     alignment and structure
>1uhv_A Beta-xylosidase; family 39 glycoside hydrolase, xylan, xylose, covalent glycosyl-enzyme intermediate; 2.10A {Thermoanaerobacterium saccharolyticum} SCOP: b.71.1.2 c.1.8.3 PDB: 1px8_A Back     alignment and structure
>1w91_A Beta-xylosidase; MAD, seMet, tetramer, hydrolase; 2.2A {Geobacillus stearothermophilus} SCOP: b.71.1.2 c.1.8.3 PDB: 2bs9_A 2bfg_A* Back     alignment and structure
>3civ_A Endo-beta-1,4-mannanase; TIM barrel, hydrolase; 1.90A {Alicyclobacillus acidocaldarius} Back     alignment and structure
>1n82_A Xylanase, intra-cellular xylanase; hydrolase; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 3mua_A* 2q8x_A* 3msd_A* 3msg_A* 3mui_A* 3ms8_A Back     alignment and structure
>3cui_A EXO-beta-1,4-glucanase; CEX, xylanase, isofagomine inhibitor, TIM barrel, cellulose degradation, glycosidase, hydrolase; HET: X4S; 1.50A {Cellulomonas fimi} PDB: 3cug_A* 3cuh_A* 3cuf_A* 3cuj_A* 1fh9_A* 1fh7_A 1fh8_A 1exp_A* 1fhd_A* 1j01_A* 2exo_A 2xyl_A 2his_A* Back     alignment and structure
>1nq6_A XYS1; glycoside hydrolase family 10, xylanase, xylan degradation,, hydrolase; 1.78A {Streptomyces halstedii} SCOP: c.1.8.3 Back     alignment and structure
>3hn3_A Beta-G1, beta-glucuronidase; lysosomal enzyme, acid hydrolase, glycosidase, disease mutat glycoprotein, hydrolase, lysosome, mucopolysaccharidosis; HET: NDG NAG BMA MAN GUP; 1.70A {Homo sapiens} PDB: 1bhg_A* Back     alignment and structure
>3lpf_A Beta-glucuronidase; alpha/beta barrel, sugar-binding domain, beta-sandwich domai glycosyl hydrolase, glycosida hydrolase; HET: Z77; 2.26A {Escherichia coli} PDB: 3k46_A* 3k4d_A* 3lpg_A* 3k4a_A Back     alignment and structure
>1xyz_A 1,4-beta-D-xylan-xylanohydrolase; glycosyl hydrolase, xylanase, family F/10 of glycosyl hydrolases, glycosyltransferase; 1.40A {Clostridium thermocellum} SCOP: c.1.8.3 Back     alignment and structure
>1ur1_A Endoxylanase; hydrolase, family 10, glycoside hydrolase, hemicellulose, xylan degradation; HET: XYS AHR; 1.43A {Cellvibrio mixtus} SCOP: c.1.8.3 PDB: 1uqy_A* 1uqz_A* 1ur2_A* 2cnc_A* Back     alignment and structure
>1v0l_A Endo-1,4-beta-xylanase A; glycoside hydrolase family 10, xylan degradation, isofagomine, hydrolase; 0.98A {Streptomyces lividans} SCOP: c.1.8.3 PDB: 1e0x_A 1e0w_A* 1od8_A 1v0k_A 1v0m_A 1v0n_A 1e0v_A* 1xas_A 2g3i_A 2g3j_A* 2g4f_A 1v6y_A Back     alignment and structure
>1i1w_A Endo-1,4-beta-xylanase; xylan degradation, hydrolase, glycosidase, enzyme, ultra HIG resolution, cryo temperature, 1; HET: PCA; 0.89A {Thermoascus aurantiacus} SCOP: c.1.8.3 PDB: 1i1x_A* 2bnj_A* 1gok_A 1gom_A 1goo_A 1goq_A* 1gor_A* 1k6a_A 3o2l_A 3nyd_A* 1tux_A 1b31_A 1b30_A 1b3v_A* 1b3w_A* 1b3x_A* 1b3y_A* 1b3z_A* 1bg4_A Back     alignment and structure
>2dep_A Xylanase B, thermostable celloxylanase; glycosidase, xylan degradation, family 10, structural genomics, NPPSFA; 1.80A {Clostridium stercorarium} Back     alignment and structure
>1ta3_B Endo-1,4-beta-xylanase; beta alpha barrel (XIP-I), beta alpha barrel (xylanase), HYD inhibitor-hydrolase complex; HET: NAG; 1.70A {Emericella nidulans} SCOP: c.1.8.3 Back     alignment and structure
>1r85_A Endo-1,4-beta-xylanase; hydrolase; HET: GOL; 1.45A {Geobacillus stearothermophilus} SCOP: c.1.8.3 PDB: 1hiz_A* 1r87_A* 3mmd_A* 1r86_A Back     alignment and structure
>1ceo_A Cellulase CELC; glycosyl hydrolase, family A/5 of glycosyl hydrolases, cellulose degradation; 1.90A {Clostridium thermocellum} SCOP: c.1.8.3 PDB: 1cen_A 1cec_A Back     alignment and structure
>2jep_A Xyloglucanase; family 5, plant cell WALL, hydrolase; 1.4A {Paenibacillus pabuli} PDB: 2jeq_A* Back     alignment and structure
>3aof_A Endoglucanase; glycosyl hydrolase family 5, cellulase, biofuel, hyperthermo hydrolase; HET: BMA; 1.29A {Thermotoga maritima} PDB: 3amg_A* 3amc_A 3amd_A 3mmu_A 3mmw_A 3azs_A* 3azr_A* 3azt_A* Back     alignment and structure
>3u7b_A Endo-1,4-beta-xylanase; TIM barrel, hydrolase; HET: NAG BMA MAN; 1.94A {Fusarium oxysporum} Back     alignment and structure
>3niy_A Endo-1,4-beta-xylanase; TIM-barrel, hydrolase; 1.58A {Thermotoga petrophila rku-1} SCOP: c.1.8.3 PDB: 3nj3_A* 1vbr_A* 1vbu_A Back     alignment and structure
>2d1z_A Endo-1,4-beta-D-xylanase; TIM-barrel, retaining enzyme, catalytic-site mutant, chemica hydrolase; 1.60A {Streptomyces olivaceoviridis} PDB: 2d20_A* 2d22_A 2d23_A 2d24_A* 1xyf_A 1isw_A* 1isx_A* 1isy_A* 1isv_A* 1it0_A* 1v6u_A* 1v6v_A* 1v6w_A* 1v6x_A* 1isz_A Back     alignment and structure
>3ndz_A Endoglucanase D; cellotriose, xylanase, carbohydrate binding D glucanase, hydrolase; HET: CT3; 2.08A {Clostridium cellulovorans} PDB: 3ndy_A* Back     alignment and structure
>2uwf_A Endoxylanase, alkaline active endoxylanase; hydrolase, xylan degradation, xylanase structure, glycosidase, alkaliphilic; 2.10A {Bacillus halodurans} PDB: 2f8q_A 2fgl_A* Back     alignment and structure
>3cmg_A Putative beta-galactosidase; structural genomics, PSI-2, Pro structure initiative, NEW YORK SGX research center for STRU genomics, nysgxrc; 1.90A {Bacteroides fragilis} Back     alignment and structure
>4awe_A Endo-beta-D-1,4-mannanase; hydrolase, endo-mannanase, glycosyl hydrolase, GH5; HET: NAG; 1.40A {Neurospora sitophila} Back     alignment and structure
>1edg_A Endoglucanase A; family A, cellulases, xylanases, family 5 of glycosyl hydrol cellulose degradation; 1.60A {Clostridium cellulolyticum} SCOP: c.1.8.3 Back     alignment and structure
>1w32_A Endo-1,4-beta-xylanase A precursor; mutant, calcium ION, thermostable, glycosyle hydrolase, family 10, error prone PCR, hydrolase; 1.2A {Cellvibrio japonicus} SCOP: c.1.8.3 PDB: 1w2p_A 1w2v_A 1w3h_A 1clx_A 1e5n_A* 1xys_A Back     alignment and structure
>2osx_A Endoglycoceramidase II; (alpha/beta)8 (TIM) barrel, hydrolase; HET: SIA GAL BGC 16C; 1.10A {Rhodococcus SP} PDB: 2oyk_A* 2osw_A* 2oyl_A* 2oym_A* 2osy_A* Back     alignment and structure
>3ta9_A Glycoside hydrolase family 1; TIM barrel, glucosidase; 3.00A {Halothermothrix orenii} Back     alignment and structure
>1us2_A Xylanase10C, endo-beta-1,4-xylanase; hydrolase, carbohydrate binding module, xylan degradation; HET: XYP; 1.85A {Cellvibrio japonicus} SCOP: b.18.1.11 c.1.8.3 PDB: 1us3_A Back     alignment and structure
>1gnx_A Beta-glucosidase; hydrolase, glycosyltransferase, family 1 of glycosyl hydrolase; HET: SUC; 1.68A {Streptomyces SP} SCOP: c.1.8.4 PDB: 1gon_A Back     alignment and structure

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST ?

Original result of RPS-BLAST against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? E-value ?
Query 342
d2cyga1312 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana ( 5e-70
d1ghsa_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 8e-67
d1aq0a_306 c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeu 7e-65
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Length = 312 Back     information, alignment and structure

class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]

 Score =  219 bits (558), Expect = 5e-70
 Identities = 90/223 (40%), Positives = 129/223 (57%), Gaps = 8/223 (3%)

Query: 2   ISNDQNLISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSF--IRQDT 59
           +    +L   +LPAM N+ NAL++A L  +IKVST     VL  S PPS+G+F    Q  
Sbjct: 95  LIPGSDLAQYILPAMRNIYNALSSAGLQNQIKVSTAVDTGVLGTSYPPSAGAFSSAAQAY 154

Query: 60  MRGILQFLKDHGSPFTINPYPFFAYQSDPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDA 119
           +  I+QFL  +G+P  +N YP+F+Y  +P   +L + LF  + G V       Y N+FDA
Sbjct: 155 LSPIVQFLASNGAPLLVNVYPYFSYTGNPGQISLPYALFTAS-GVVVQDGRFSYQNLFDA 213

Query: 120 QVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNGNLIAHLRSMAGTP 179
            VDAV +AL  +G  +V +VV+E+GWP  G       S  NA+ YN NLI H+    GTP
Sbjct: 214 IVDAVFAALERVGGANVAVVVSESGWPSAGGGA--EASTSNAQTYNQNLIRHVGG--GTP 269

Query: 180 LMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVG 222
             PGK ++ YIF +++E+ K G   E++FGLF P+    Y + 
Sbjct: 270 RRPGKEIEAYIFEMFNENQKAGG-IEQNFGLFYPNKQPVYQIS 311
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Length = 306 Back     information, alignment and structure

Homologous Domains Detected by HHsearch ?

Original result of HHsearch against SCOP70(version1.75) database

ID ?Alignment Graph ?Length ? Definition ? Probability ?
Query342
d1aq0a_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d1ghsa_306 Plant beta-glucanases {Barley (Hordeum vulgare), 1 100.0
d2cyga1312 Plant beta-glucanases {Banana (Musa acuminata), 1, 100.0
d1uhva2346 Beta-D-xylosidase, catalytic domain {Thermoanaerob 98.05
d1hjsa_332 Beta-1,4-galactanase {Thielavia heterothallica, ak 97.92
d1foba_334 Beta-1,4-galactanase {Fungus (Aspergillus aculeatu 97.82
d1xyza_320 Xylanase {Clostridium thermocellum, XynZ [TaxId: 1 97.62
d1vbua1324 Xylanase {Thermotoga maritima [TaxId: 2336]} 97.02
d1fh9a_312 Xylanase A, catalytic core {Cellulomonas fimi [Tax 96.86
d1nq6a_302 Xylanase A, catalytic core {Streptomyces halstedii 96.14
d1n82a_330 Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId 96.03
d1us3a2364 Xylanase 10c {Cellvibrio japonicus [TaxId: 155077] 95.35
d1ur4a_387 Beta-1,4-galactanase {Bacillus licheniformis [TaxI 95.31
d1v0la_302 Xylanase A, catalytic core {Streptomyces lividans 94.06
d1bhga3304 beta-Glucuronidase, domain 3 {Human (Homo sapiens) 92.34
d1uuqa_410 Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} 87.82
d1e4ia_447 Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406 84.93
d1ug6a_426 Beta-glucosidase A {Thermus thermophilus [TaxId: 2 84.57
d1rh9a1370 Beta-mannanase {Tomato (Lycopersicon esculentum) [ 84.35
d2v3ga1273 Endoglucanase H N-terminal domain {Clostridium the 80.83
>d1aq0a_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
class: Alpha and beta proteins (a/b)
fold: TIM beta/alpha-barrel
superfamily: (Trans)glycosidases
family: beta-glycanases
domain: Plant beta-glucanases
species: Barley (Hordeum vulgare), 1,3-1,4-beta-glucanase [TaxId: 4513]

Probab=100.00  E-value=7.2e-59  Score=444.39  Aligned_cols=206  Identities=37%  Similarity=0.700  Sum_probs=194.9

Q ss_pred             HhHHHHHHHHHHHHHHHCCCCCCcEEEeccccccccCCCCCCCcccCCc--hhHHHHHHHHHhcCCccEEecCCCCccCC
Q 019362            9 ISQLLPAMANMQNALNAASLGGKIKVSTVHAMSVLAQSDPPSSGSFIRQ--DTMRGILQFLKDHGSPFTINPYPFFAYQS   86 (342)
Q Consensus         9 ~~~Lvpam~ni~~aL~~~gl~~~ikVst~~~~~~l~~s~pPS~g~F~~~--~~~~~~l~fL~~~~sp~~vNiyPyf~~~~   86 (342)
                      ...|+|+|+|||++|+++||. .|||+|+++++++..++|||++.|+++  ++|+++++||.++++|||+|+||||+|..
T Consensus        99 ~~~l~~a~~ni~~al~~~gl~-~i~vs~~~~~~~~~~s~pps~~~f~~~~~~~~~~~~~~l~~~~~~~~vN~yPyf~~~~  177 (306)
T d1aq0a_          99 TRNLVPAMKNVHGALVAAGLG-HIKVTTSVSQAILGVFSPPSAGSFTGEAAAFMGPVVQFLARTNAPLMANIYPYLAWAY  177 (306)
T ss_dssp             GGGHHHHHHHHHHHHHHTTCT-TSEEEEEEEGGGEEECSSGGGCEECHHHHHHHHHHHHHHHHHTCCEEEECCHHHHHHH
T ss_pred             ccchhhHHHHHHHHHHHCCCC-ceeEEEeecceeeccCCCCCcceeccchHHHHHHHHHHHHHcCCeeEEecccchhhhc
Confidence            467999999999999999996 599999999999999999999999998  99999999999999999999999999999


Q ss_pred             CCCCcCcceeccCCCCccccCCCCccchhhHHHHHHHHHHHHHHhCCCCceEEEeeecCCCCCCCCCCCCCHHHHHHHHH
Q 019362           87 DPRPETLAFCLFQPNAGRVDSGTGIKYMNMFDAQVDAVHSALNAMGFKDVEIVVAETGWPYRGDPNEVGPSVENAKAYNG  166 (342)
Q Consensus        87 ~~~~i~l~yalf~~~~~~~d~~~~~~Y~n~fda~~Dav~~A~~k~g~~~~~vvVtETGWPs~G~~~~~~as~~Na~~y~~  166 (342)
                      ++..++|+||+|+++. .++.++++.|+||||+|+|++++||+|+|+++|+|+|+||||||+|+.   .|+++||++|++
T Consensus       178 ~~~~~~l~~a~f~~~~-~~~~~~~~~y~n~~~a~~d~~~~al~~~~~~~k~ivI~EtGWPS~G~~---~as~~na~~y~~  253 (306)
T d1aq0a_         178 NPSAMDMGYALFNASG-TVVRDGAYGYQNLFDTTVDAFYTAMGKHGGSSVKLVVSESGWPSGGGT---AATPANARFYNQ  253 (306)
T ss_dssp             CTTSSCHHHHHTCCCS-CSEEETTEEECSHHHHHHHHHHHHHHTTTCTTCCEEEEECCCCSSSST---TCCHHHHHHHHH
T ss_pred             CccccccchhhccCCC-ceecCcHHHHHHHHHHHHHHHHHHHHHcCCCCCceEEeccccccCCCC---CCCHHHHHHHHH
Confidence            9999999999999764 456678999999999999999999999999999999999999999975   599999999999


Q ss_pred             HHHHHHhhcCCCCCCCCCcccEEEEEeecCCCCCCCccCcceeeecCCCCeeeeeec
Q 019362          167 NLIAHLRSMAGTPLMPGKSVDTYIFALYDEDLKPGPAFERSFGLFKPDLSAAYDVGI  223 (342)
Q Consensus       167 ~lv~~~~~~~Gtp~rp~~~~~~y~F~lfDe~~K~g~~~E~~wGlf~~d~~~ky~l~~  223 (342)
                      +|++++.  +|||+||+ .+++||||||||+||+| ++|||||||++||+|||+|+|
T Consensus       254 ~l~~~~~--~gt~~~~~-~i~~f~FeaFDE~wK~g-~~E~~wGlf~~d~~~ky~~~f  306 (306)
T d1aq0a_         254 HLINHVG--RGTPRHPG-AIETYIFAMFNENQKDS-GVEQNWGLFYPNMQHVYPINF  306 (306)
T ss_dssp             HHHHHTT--TBCSSSBS-CCCBEESCSBCCTTSCS-SGGGCCCSBCTTSCBSSCCCC
T ss_pred             HHHHHHh--cCCCCCCC-CeeEEEEeeeCcCCCCC-CccCeeeeECCCCCEecCCCC
Confidence            9999984  69999999 79999999999999987 799999999999999999976
>d1ghsa_ c.1.8.3 (A:) Plant beta-glucanases {Barley (Hordeum vulgare), 1,3-beta-glucanase [TaxId: 4513]} Back     information, alignment and structure
>d2cyga1 c.1.8.3 (A:29-340) Plant beta-glucanases {Banana (Musa acuminata), 1,3-beta-glucanase [TaxId: 4641]} Back     information, alignment and structure
>d1uhva2 c.1.8.3 (A:14-359) Beta-D-xylosidase, catalytic domain {Thermoanaerobacterium saccharolyticum [TaxId: 28896]} Back     information, alignment and structure
>d1hjsa_ c.1.8.3 (A:) Beta-1,4-galactanase {Thielavia heterothallica, aka Myceliophthora thermophila [TaxId: 78579]} Back     information, alignment and structure
>d1foba_ c.1.8.3 (A:) Beta-1,4-galactanase {Fungus (Aspergillus aculeatus) [TaxId: 5053]} Back     information, alignment and structure
>d1xyza_ c.1.8.3 (A:) Xylanase {Clostridium thermocellum, XynZ [TaxId: 1515]} Back     information, alignment and structure
>d1vbua1 c.1.8.3 (A:517-840) Xylanase {Thermotoga maritima [TaxId: 2336]} Back     information, alignment and structure
>d1fh9a_ c.1.8.3 (A:) Xylanase A, catalytic core {Cellulomonas fimi [TaxId: 1708]} Back     information, alignment and structure
>d1nq6a_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces halstedii [TaxId: 1944]} Back     information, alignment and structure
>d1n82a_ c.1.8.3 (A:) Xylanase {Bacillus stearothermophilus, Ixt6 [TaxId: 1422]} Back     information, alignment and structure
>d1us3a2 c.1.8.3 (A:243-606) Xylanase 10c {Cellvibrio japonicus [TaxId: 155077]} Back     information, alignment and structure
>d1ur4a_ c.1.8.3 (A:) Beta-1,4-galactanase {Bacillus licheniformis [TaxId: 1402]} Back     information, alignment and structure
>d1v0la_ c.1.8.3 (A:) Xylanase A, catalytic core {Streptomyces lividans [TaxId: 1916]} Back     information, alignment and structure
>d1bhga3 c.1.8.3 (A:329-632) beta-Glucuronidase, domain 3 {Human (Homo sapiens) [TaxId: 9606]} Back     information, alignment and structure
>d1uuqa_ c.1.8.3 (A:) Exomannosidase {Cellvibrio mixtus [TaxId: 39650]} Back     information, alignment and structure
>d1e4ia_ c.1.8.4 (A:) Beta-glucosidase A {Bacillus polymyxa [TaxId: 1406]} Back     information, alignment and structure
>d1ug6a_ c.1.8.4 (A:) Beta-glucosidase A {Thermus thermophilus [TaxId: 274]} Back     information, alignment and structure
>d1rh9a1 c.1.8.3 (A:30-399) Beta-mannanase {Tomato (Lycopersicon esculentum) [TaxId: 4081]} Back     information, alignment and structure
>d2v3ga1 c.1.8.3 (A:8-280) Endoglucanase H N-terminal domain {Clostridium thermocellum [TaxId: 1515]} Back     information, alignment and structure