Citrus Sinensis ID: 019366


Local Sequence Feature Prediction

Prediction and MethodResult
Residue Number Marker
Protein Sequence ?
Secondary Structure (Consensus) ?
Disordered Region (Consensus) ?
Transmembrane Helix (Consensus) ?
Signal Peptide (Consensus) ?
Coiled Coil (COILS) ?
 
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340--
MASRTHLDDDDDFGGDFSANHNSRRSGSKRSFGDIEDDEDDIFGSRKANSKVEETAPGVATGMILSLRESLQNCKDTLATCQLELEAAKSEIQKWHSSFQNELFIPPGTSPEPRLVINYLQTLKSSEEMLKEQLEKAKKKEAAFIVTFAKREQEIAELKSAVRDLKAQLKPPLMQARRLLLDPAIHEEFRRLKNLVEEKDKKVKELEENIAAVSFTANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMVLMLREKLEENDHELEKLKHELRQKSVLEEDKNDSVSDKNIGNDVTVSGEAVS
ccccccccccccccccccccccccccccccccccccccccHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccHHHHHHHHccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHccccccccccccccccccccccc
*********DDDFGGDFS****************************************VATGMILSLRESLQNCKDTLATCQLELEAAKSEIQKWHSSFQNELFIP*******RLVINYLQT*******************AAFIVTFAKREQEIAEL***V**********LMQARRLLLDPAIHEEFRRLKNL****************AV*******************************************************FEALYKH*******************************************************************
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MASRTHLDDDDDFGGDFSANHNSRRSGSKRSFGDIEDDEDDIFGSRKANSKVEETAPGVATGMILSLRESxxxxxxxxxxxxxxxxxxxxxIQKWHSSFQNELFIPPGTSPEPRLVINYxxxxxxxxxxxxxxxxxxxxxxxxFIVTxxxxxxxxxxxxxxxxxxxxxLKPPLMQARRLLLDPAIHEExxxxxxxxxxxxxxxxxxxxxxxxxxxxANSKMGKALMAKCKTLQEENDEIGRQNEEGETHQLSVKLALQKSLNAELKSQFEALYKHMDGLTDDVERSNEMxxxxxxxxxxxxxxxxxxxxxxxxxxxxEEDKNDSVSDKNIGNDVTVSGEAVS

Function Prediction

Annotation transfered from Closely Related SWISS-PROT Entries ?

Annotation ?Function Description ?Confidence Level ?Reference Protein ?
FKBP12-interacting protein of 37 kDa Essential protein required during endosperm development and embryogenesis. Involved in endoreduplication, especially in trichomes. May play a role in splicing events.confidentQ9ZSZ8

Prediction of Enzyme Commission Number ?

No EC number assigned to the protein, probably not an enzyme!


Spatial Structural Prediction

Structural Models Based on Templates

Template: 2DFS, chain A
Confidence level:confident
Coverage over the Query: 223-311
View the alignment between query and template
View the model in PyMOL
Template: 2DFS, chain A
Confidence level:confident
Coverage over the Query: 183-207,224-241
View the alignment between query and template
View the model in PyMOL
Template: 2V71, chain A
Confidence level:probable
Coverage over the Query: 140-169,186-202,222-244,257-278
View the alignment between query and template
View the model in PyMOL
Template: 3OJA, chain B
Confidence level:probable
Coverage over the Query: 64-168,189-210
View the alignment between query and template
View the model in PyMOL

Templates for Structure Prediction

ID ?Alignment Graph ?Confidence Level ? View Alignment and Template ?
Query
1g8x, chain Aprobable Alignment | Template Structure